Citrus Sinensis ID: 019481

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340
Protein Sequence
MGGSAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFYIRLVTTFNSVAFFLSIALMMILFNKLPLRPLLLVSAFSMLGAYMCIISGPTRPHLSSFYSTF
Secondary Structure (PSIPRED)
cccccccccEEEEEEcccccEEEEEEEcccccccccHHHHHHHHHHHHcccccccccccccccccccccccEEEEEEEccccccccccHHcccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccEEEccHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHcccEEEEEEEEEcHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccEEEEcccccccEEEEEEEcccccccccHHHHHHHHHHHHHHHcccHEEEEEEcccccEcccccEEEEEEEEEcccccHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEccHcHEEEcccccccHcHcccEEEcccccccccEEEEEEEccccccccHHHHcccEEEEcEEEEEEcccccHHHHHHHHHHHcccccccccccHHHcEEHHHHHHccccccEEcHHHcccccccHHccccccccHHHHHHccccEEEEEEEcHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHEEEEcccccccccccEccc
Coil and Loop (DISEMBL)
mggsapsfsvlihvpfpddrdDVMLKLHELitplqlrrdddgkldsleeifhpnqvkpsgywsmnicltgdrrycwKNKWLmqkkglenvhigehpaSVRQLRRAERLEIVTKMCQDLAFLhssekqviyrdfkapnilldetfkcnlsdfstakvsavenadltaldtssvsaqsgktgMEMKMAQLEsggwrahdeaekafqwpyksshlkntrpnlktenETWNNFLYLLLIATLLSTITFLSALKitgckseegyknnsslnpicqivnqhpFYIRLVTTFNSVAFFLSIALMMILFNKLPLRPLLLVSAFSMLGAYMCiisgptrphlssfystf
Flexible Loop (DISEMBL)
MGGSAPSFSVLIHVPFPDDRDDVMLKLHELitplqlrrddDGKLDSLEEifhpnqvkpsgywSMNICLTGDRRYCWKNKWLMQKKGlenvhigehpasvRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAvenadltaldtssvsaqsgktgMEMKMAQLESGGWRAHDEAEKAFqwpyksshlkntrpnLKTENETWNNFLYLLLIATLLSTITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFYIRLVTTFNSVAFFLSIALMMILFNKLPLRPLLLVSAFSMLGAYMCIISgptrphlsSFYSTF
Low Complexity Region (SEG)
MGGSAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNflyllliatllstitflsalKITGCKSEEGYKNNSSLNPICQIVNQHPFYIRLVTTFNSVAFFLSIALMMILFNKlplrplllVSAFSMLGAYMCIISGPTRPHLSSFYSTF
Disordered region (IsUnstruct)
********SVLIHVPFPDDRDDVMLKLHELITPLQLRRD***KLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV********************************************QW****************ENETWNNFLYLLLIATLLSTITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFYIRLVTTFNSVAFFLSIALMMILFNKLPLRPLLLVSAFSMLGAYMCIISGP************
Disordered Region (DISOPRED)
*GGSAPSFSVLIHVPFPDDRDDVMLKLHE*****QLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTITFLSALKIT****************ICQIVNQHPFYIRLVTTFNSVAFFLSIALMMILFNKLPLRPLLLVSAFSMLGAYMCIISGPTRPHL**FYSTF
Disordered Region (DISEMBL)
MGGSAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFYIRLVTTFNSVAFFLSIALMMILFNKLPLRPLLLVSAFSMLGAYMCIISGPTRPHLSSFYSTF
Disordered Region (DISPRO)
***SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFYIRLVTTFNSVAFFLSIALMMILFNKLPLRPLLLVSAFSMLGAYMCIISGPTRPHL***Y***
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGGSAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFYIRLVTTFNSVAFFLSIALMMILFNKLPLRPLLLVSAFSMLGAYMCIISGPTRPHLSSFYSTF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	340	2.2.26 [Sep-21-2011]
O49840	426	Protein kinase 2B, chloro	no	no	0.338	0.269	0.393	1e-11
O49839	426	Protein kinase 2A, chloro	no	no	0.358	0.286	0.365	1e-10
P43293	389	Probable serine/threonine	no	no	0.335	0.293	0.360	2e-10
O48814	395	Serine/threonine-protein	no	no	0.308	0.265	0.389	2e-10
P46573	412	Protein kinase APK1B, chl	no	no	0.308	0.254	0.380	2e-10
Q8H186	389	Probable receptor-like pr	no	no	0.311	0.272	0.371	4e-10
P27450	419	Probable serine/threonine	no	no	0.158	0.128	0.518	4e-09
Q8GXZ3	410	Serine/threonine-protein	no	no	0.335	0.278	0.370	4e-09
Q06548	410	Protein kinase APK1A, chl	no	no	0.308	0.256	0.380	4e-09
O65530	731	Proline-rich receptor-lik	no	no	0.388	0.180	0.328	8e-09

>sp|O49840|APK2B_ARATH Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1

 Score = 70.9 bits (172), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/127 (39%), Positives = 66/127 (51%), Gaps = 12/127 (9%)

Query: 43  KLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQL 102
           +++ L ++ HPN VK  GY     C+ G+ R        M K  LEN H+    A  + L
Sbjct: 137 EVNYLGQLSHPNLVKLVGY-----CVEGENRLLVYE--FMPKGSLEN-HLFRRGA--QPL 186

Query: 103 RRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA 162
             A R+++     + L FLH ++ QVIYRDFKA NILLD  F   LSDF  AK  A    
Sbjct: 187 TWAIRMKVAIGAAKGLTFLHDAKSQVIYRDFKAANILLDAEFNSKLSDFGLAK--AGPTG 244

Query: 163 DLTALDT 169
           D T + T
Sbjct: 245 DKTHVST 251

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|O49839|APK2A_ARATH Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=2 SV=1

 Score = 67.8 bits (164), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/134 (36%), Positives = 65/134 (48%), Gaps = 12/134 (8%)

Query: 43  KLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQL 102
           +++ L ++ HPN V   GY     C  G+ R        M K  LEN H+    A  + L
Sbjct: 140 EVNYLGQLSHPNLVLLVGY-----CAEGENRLLVYE--FMPKGSLEN-HLFRRGA--QPL 189

Query: 103 RRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA 162
             A R+++     + L FLH ++ QVIYRDFKA NILLD  F   LSDF  AK  A    
Sbjct: 190 TWAIRMKVAVGAAKGLTFLHEAKSQVIYRDFKAANILLDADFNAKLSDFGLAK--AGPTG 247

Query: 163 DLTALDTSSVSAQS 176
           D T + T  +    
Sbjct: 248 DNTHVSTKVIGTHG 261

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P43293|NAK_ARATH Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2

 Score = 66.6 bits (161), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 8/122 (6%)

Query: 34  LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIG 93
            Q  R+   +++ L ++ HPN VK  GY     CL  + R        M +  LEN H+ 
Sbjct: 113 FQGHREWLAEINYLGQLDHPNLVKLIGY-----CLEEEHRLLVYE--FMTRGSLEN-HLF 164

Query: 94  EHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFST 153
                 + L    R+ +     + LAFLH+++ QVIYRDFKA NILLD  +   LSDF  
Sbjct: 165 RRGTFYQPLSWNTRVRMALGAARGLAFLHNAQPQVIYRDFKASNILLDSNYNAKLSDFGL 224

Query: 154 AK 155
           A+
Sbjct: 225 AR 226

May play a role in the regulation of plant growth and development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O48814|BIK1_ARATH Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1

 Score = 66.6 bits (161), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 58/113 (51%), Gaps = 8/113 (7%)

Query: 43  KLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQL 102
           +++ L ++ HPN VK  GY     CL  + R        MQK  LEN H+    A  + L
Sbjct: 121 EINYLGQLSHPNLVKLIGY-----CLEDEHRLLVYE--FMQKGSLEN-HLFRRGAYFKPL 172

Query: 103 RRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
               R+ +     + LAFLHS   +VIYRD KA NILLD  +   LSDF  A+
Sbjct: 173 PWFLRVNVALDAAKGLAFLHSDPVKVIYRDIKASNILLDADYNAKLSDFGLAR 225

Required to activate the resistance responses to necrotrophic pathogens. Phosphorylates FLS2 and BAK1.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P46573|APK1B_ARATH Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2

 Score = 66.6 bits (161), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 8/113 (7%)

Query: 43  KLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQL 102
           +++ L +  HPN VK  GY     CL  + R        M +  LEN H+    +  + L
Sbjct: 123 EVNYLGQFSHPNLVKLIGY-----CLEDEHRLLVYE--FMPRGSLEN-HLFRRGSYFQPL 174

Query: 103 RRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
               RL++     + LAFLH++E  VIYRDFK  NILLD  +   LSDF  AK
Sbjct: 175 SWTLRLKVALGAAKGLAFLHNAETSVIYRDFKTSNILLDSEYNAKLSDFGLAK 227

Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8H186|Y3545_ARATH Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1

 Score = 65.9 bits (159), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 56/113 (49%), Gaps = 7/113 (6%)

Query: 43  KLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQL 102
           +++ L ++ HPN VK  GY     CL  ++R        M K  LEN          + L
Sbjct: 115 EINYLGQLSHPNLVKLIGY-----CLEDEQRLLVYE--FMHKGSLENHLFANGNKDFKPL 167

Query: 103 RRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
               R+++     + LAFLHS   +VIYRD KA NILLD  F   LSDF  A+
Sbjct: 168 SWILRIKVALDAAKGLAFLHSDPVKVIYRDIKASNILLDSDFNAKLSDFGLAR 220

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P27450|CX32_ARATH Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2

 Score = 62.8 bits (151), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/54 (51%), Positives = 37/54 (68%)

Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE 160
           R++IV    + LAFLHS +++VIYRDFKA NILLD  +   LSDF  AK+   +
Sbjct: 193 RIKIVIGAARGLAFLHSLQREVIYRDFKASNILLDSNYDAKLSDFGLAKLGPAD 246

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8GXZ3|Y5102_ARATH Serine/threonine-protein kinase At5g01020 OS=Arabidopsis thaliana GN=At5g01020 PE=1 SV=1

 Score = 62.8 bits (151), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 34  LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIG 93
           LQ  R+   +++ L ++ HPN VK  GY     C   D R        M +  LEN H+ 
Sbjct: 111 LQGHREWLTEVNFLGQLRHPNLVKLIGY-----CCEDDHRLLVYE--FMLRGSLEN-HLF 162

Query: 94  EHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFST 153
               +   L  + R+ I     + LAFLH++E+ VIYRDFK  NILLD  +   LSDF  
Sbjct: 163 RK--TTAPLSWSRRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGL 220

Query: 154 AKVS 157
           AK  
Sbjct: 221 AKAG 224

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q06548|APK1A_ARATH Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1

 Score = 62.4 bits (150), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 57/113 (50%), Gaps = 8/113 (7%)

Query: 43  KLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQL 102
           +++ L +  H + VK  GY     CL  + R        M +  LEN H+       + L
Sbjct: 122 EVNYLGQFSHRHLVKLIGY-----CLEDEHRLLVYE--FMPRGSLEN-HLFRRGLYFQPL 173

Query: 103 RRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
               RL++     + LAFLHSSE +VIYRDFK  NILLD  +   LSDF  AK
Sbjct: 174 SWKLRLKVALGAAKGLAFLHSSETRVIYRDFKTSNILLDSEYNAKLSDFGLAK 226

Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O65530|PEK14_ARATH Proline-rich receptor-like protein kinase PERK14 OS=Arabidopsis thaliana GN=PERK14 PE=2 SV=1

 Score = 61.6 bits (148), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 68/143 (47%), Gaps = 11/143 (7%)

Query: 31  ITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENV 90
           I   Q  R+   ++D++  + H + V   GY     C+ GD+R        + K  LE  
Sbjct: 421 IGSYQGEREFQAEVDTISRVHHKHLVSLVGY-----CVNGDKRLLVYE--FVPKDTLE-F 472

Query: 91  HIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSS-EKQVIYRDFKAPNILLDETFKCNLS 149
           H+ E+  SV  L    RL I     + LA+LH      +I+RD KA NILLD  F+  +S
Sbjct: 473 HLHENRGSV--LEWEMRLRIAVGAAKGLAYLHEDCSPTIIHRDIKAANILLDSKFEAKVS 530

Query: 150 DFSTAKVSAVENADLTALDTSSV 172
           DF  AK  +  N+  T + T  V
Sbjct: 531 DFGLAKFFSDTNSSFTHISTRVV 553

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	340
413923405	462	putative protein kinase superfamily prot	0.347	0.255	0.391	2e-13
226532172	466	protein kinase APK1B [Zea mays] gi|19561	0.347	0.253	0.391	2e-13
297836446	414	hypothetical protein ARALYDRAFT_480605 [	0.314	0.258	0.443	5e-13
42570809	413	protein kinase domain-containing protein	0.314	0.259	0.434	9e-13
21537344	414	putative protein kinase [Arabidopsis tha	0.314	0.258	0.434	9e-13
18398350	414	protein kinase domain-containing protein	0.314	0.258	0.434	1e-12
297744479	453	unnamed protein product [Vitis vinifera]	0.297	0.222	0.421	1e-12
359477083	310	PREDICTED: probable serine/threonine-pro	0.323	0.354	0.4	1e-12
296088660	315	unnamed protein product [Vitis vinifera]	0.323	0.349	0.4	1e-12
359474965	417	PREDICTED: probable serine/threonine-pro	0.297	0.242	0.421	1e-12

>gi|413923405|gb|AFW63337.1| putative protein kinase superfamily protein [Zea mays]

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/138 (39%), Positives = 67/138 (48%), Gaps = 20/138 (14%)

Query: 38  RDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRR---------YCWKNKWL------M 82
           R+D G L    +  +P  ++ +  W   +   G            YCW++K L      M
Sbjct: 146 RNDSGGLPVAVKKLNPESLQGAQEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEYM 205

Query: 83  QKKGLENVHIGEHP-----ASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPN 137
            K  LEN   G  P      +V+ L  + RL IVT   + LAFLHSSEK VIYRDFKA N
Sbjct: 206 AKGSLENHLFGSEPRKGGGGAVQPLPWSLRLRIVTGAARGLAFLHSSEKHVIYRDFKASN 265

Query: 138 ILLDETFKCNLSDFSTAK 155
           ILLD  F   LSD   AK
Sbjct: 266 ILLDTHFNAKLSDLGLAK 283

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226532172|ref|NP_001148215.1| protein kinase APK1B [Zea mays] gi|195616752|gb|ACG30206.1| protein kinase APK1B [Zea mays]

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/138 (39%), Positives = 67/138 (48%), Gaps = 20/138 (14%)

Query: 38  RDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRR---------YCWKNKWL------M 82
           R+D G L    +  +P  ++ +  W   +   G            YCW++K L      M
Sbjct: 144 RNDSGGLPVAVKKLNPESLQGAQEWQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEYM 203

Query: 83  QKKGLENVHIGEHP-----ASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPN 137
            K  LEN   G  P      +V+ L  + RL IVT   + LAFLHSSEK VIYRDFKA N
Sbjct: 204 AKGSLENHLFGSEPRKGGGGAVQPLPWSLRLRIVTGAARGLAFLHSSEKHVIYRDFKASN 263

Query: 138 ILLDETFKCNLSDFSTAK 155
           ILLD  F   LSD   AK
Sbjct: 264 ILLDTHFNAKLSDLGLAK 281

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297836446|ref|XP_002886105.1| hypothetical protein ARALYDRAFT_480605 [Arabidopsis lyrata subsp. lyrata] gi|297331945|gb|EFH62364.1| hypothetical protein ARALYDRAFT_480605 [Arabidopsis lyrata subsp. lyrata]

 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 66/115 (57%), Gaps = 8/115 (6%)

Query: 43  KLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQL 102
           +++ L  + HPN VK  GY     CL G+          MQK  LEN H+    +SV+ L
Sbjct: 139 EVNFLGRVSHPNLVKLLGY-----CLEGEELLLVYE--YMQKGSLEN-HLFRKGSSVQPL 190

Query: 103 RRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVS 157
               RL+I     + LAFLH+SEKQVIYRDFKA NILLD ++   +SDF  AK+ 
Sbjct: 191 SWEIRLKIAIGAAKGLAFLHASEKQVIYRDFKASNILLDGSYNAKISDFGLAKLG 245

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42570809|ref|NP_973478.1| protein kinase domain-containing protein [Arabidopsis thaliana] gi|330251506|gb|AEC06600.1| protein kinase domain-containing protein [Arabidopsis thaliana]

 Score = 80.5 bits (197), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 50/115 (43%), Positives = 66/115 (57%), Gaps = 8/115 (6%)

Query: 43  KLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQL 102
           +++ L  + HPN VK  GY     CL G+          MQK  LEN H+    ++V+ L
Sbjct: 138 EVNFLGRVSHPNLVKLLGY-----CLEGEELLLVYE--YMQKGSLEN-HLFRKGSAVQPL 189

Query: 103 RRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVS 157
               RL+I     + LAFLH+SEKQVIYRDFKA NILLD ++   +SDF  AK+ 
Sbjct: 190 SWEIRLKIAIGAAKGLAFLHASEKQVIYRDFKASNILLDGSYNAKISDFGLAKLG 244

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21537344|gb|AAM61685.1| putative protein kinase [Arabidopsis thaliana]

 Score = 80.5 bits (197), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 50/115 (43%), Positives = 66/115 (57%), Gaps = 8/115 (6%)

Query: 43  KLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQL 102
           +++ L  + HPN VK  GY     CL G+          MQK  LEN H+    ++V+ L
Sbjct: 139 EVNFLGRVSHPNLVKLLGY-----CLEGEELLLVYE--YMQKGSLEN-HLFRKGSAVQPL 190

Query: 103 RRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVS 157
               RL+I     + LAFLH+SEKQVIYRDFKA NILLD ++   +SDF  AK+ 
Sbjct: 191 SWEIRLKIAIGAAKGLAFLHASEKQVIYRDFKASNILLDGSYNAKISDFGLAKLG 245

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18398350|ref|NP_565408.1| protein kinase domain-containing protein [Arabidopsis thaliana] gi|13877653|gb|AAK43904.1|AF370585_1 putative protein kinase [Arabidopsis thaliana] gi|15146244|gb|AAK83605.1| At2g17220/T23A1.8 [Arabidopsis thaliana] gi|20198102|gb|AAD25140.2| putative protein kinase [Arabidopsis thaliana] gi|23506217|gb|AAN31120.1| At2g17220/T23A1.8 [Arabidopsis thaliana] gi|330251505|gb|AEC06599.1| protein kinase domain-containing protein [Arabidopsis thaliana]

 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/115 (43%), Positives = 66/115 (57%), Gaps = 8/115 (6%)

Query: 43  KLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQL 102
           +++ L  + HPN VK  GY     CL G+          MQK  LEN H+    ++V+ L
Sbjct: 139 EVNFLGRVSHPNLVKLLGY-----CLEGEELLLVYE--YMQKGSLEN-HLFRKGSAVQPL 190

Query: 103 RRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVS 157
               RL+I     + LAFLH+SEKQVIYRDFKA NILLD ++   +SDF  AK+ 
Sbjct: 191 SWEIRLKIAIGAAKGLAFLHASEKQVIYRDFKASNILLDGSYNAKISDFGLAKLG 245

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297744479|emb|CBI37741.3| unnamed protein product [Vitis vinifera]

 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/121 (42%), Positives = 67/121 (55%), Gaps = 20/121 (16%)

Query: 43  KLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL------MQKKGLENVHIGEHP 96
           +++ L  + HPN VK  GY             CW++K L      MQK  LEN H+    
Sbjct: 134 EVNFLGRLSHPNLVKLLGY-------------CWEDKELLLVYEFMQKGSLEN-HLFGRG 179

Query: 97  ASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV 156
           A+V+ L    RL+I     + L FLH+SEKQVIYRDFKA NILLD ++   +SDF  AK+
Sbjct: 180 ATVQPLPWDIRLKISIGAARGLTFLHTSEKQVIYRDFKASNILLDGSYTAKISDFGLAKL 239

Query: 157 S 157
            
Sbjct: 240 G 240

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359477083|ref|XP_002280326.2| PREDICTED: probable serine/threonine-protein kinase Cx32, chloroplastic-like [Vitis vinifera]

 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/130 (40%), Positives = 68/130 (52%), Gaps = 20/130 (15%)

Query: 34  LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL------MQKKGL 87
           LQ  ++   +++ L  + HPN VK  GY             CW +K L      MQK  L
Sbjct: 142 LQGFQEWQSEVNFLGRLSHPNLVKLLGY-------------CWDDKELLLVYEFMQKGSL 188

Query: 88  ENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCN 147
           EN H+     S+  L    RL+I     + LAFLH+S+KQVIYRDFKA NILLD  +   
Sbjct: 189 EN-HLFRRNPSIEPLSWQLRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGEYNAK 247

Query: 148 LSDFSTAKVS 157
           +SDF  AK+ 
Sbjct: 248 ISDFGLAKLG 257

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088660|emb|CBI37651.3| unnamed protein product [Vitis vinifera]

 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/130 (40%), Positives = 68/130 (52%), Gaps = 20/130 (15%)

Query: 34  LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL------MQKKGL 87
           LQ  ++   +++ L  + HPN VK  GY             CW +K L      MQK  L
Sbjct: 142 LQGFQEWQSEVNFLGRLSHPNLVKLLGY-------------CWDDKELLLVYEFMQKGSL 188

Query: 88  ENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCN 147
           EN H+     S+  L    RL+I     + LAFLH+S+KQVIYRDFKA NILLD  +   
Sbjct: 189 EN-HLFRRNPSIEPLSWQLRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGEYNAK 247

Query: 148 LSDFSTAKVS 157
           +SDF  AK+ 
Sbjct: 248 ISDFGLAKLG 257

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359474965|ref|XP_003631561.1| PREDICTED: probable serine/threonine-protein kinase Cx32, chloroplastic-like isoform 2 [Vitis vinifera]

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/121 (42%), Positives = 67/121 (55%), Gaps = 20/121 (16%)

Query: 43  KLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL------MQKKGLENVHIGEHP 96
           +++ L  + HPN VK  GY             CW++K L      MQK  LEN H+    
Sbjct: 136 EVNFLGRLSHPNLVKLLGY-------------CWEDKELLLVYEFMQKGSLEN-HLFGRG 181

Query: 97  ASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV 156
           A+V+ L    RL+I     + L FLH+SEKQVIYRDFKA NILLD ++   +SDF  AK+
Sbjct: 182 ATVQPLPWDIRLKISIGAARGLTFLHTSEKQVIYRDFKASNILLDGSYTAKISDFGLAKL 241

Query: 157 S 157
            
Sbjct: 242 G 242

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	340
TAIR|locus:2059642	414	Kin3 "kinase 3" [Arabidopsis t	0.311	0.256	0.438	2.6e-13
TAIR|locus:2058847	426	APK2B "protein kinase 2B" [Ara	0.338	0.269	0.393	1.5e-10
TAIR|locus:2014614	484	AT1G76360 [Arabidopsis thalian	0.288	0.202	0.445	4.4e-10
TAIR|locus:2012492	426	APK2A "protein kinase 2A" [Ara	0.347	0.276	0.376	9.8e-10
TAIR|locus:2039772	395	BIK1 "botrytis-induced kinase1	0.344	0.296	0.370	1.4e-09
TAIR|locus:2205714	412	AT1G26970 [Arabidopsis thalian	0.352	0.291	0.390	1.6e-09
TAIR|locus:2053240	423	PK1B "protein kinase 1B" [Arab	0.308	0.248	0.380	2.2e-09
TAIR|locus:2180127	389	NAK [Arabidopsis thaliana (tax	0.308	0.269	0.371	3e-09
TAIR|locus:2200863	424	AT1G61590 [Arabidopsis thalian	0.361	0.290	0.388	4.8e-09
TAIR|locus:2019180	399	AT1G74490 [Arabidopsis thalian	0.320	0.273	0.378	7.1e-09

TAIR|locus:2059642 Kin3 "kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 196 (74.1 bits), Expect = 2.6e-13, P = 2.6e-13
 Identities = 50/114 (43%), Positives = 66/114 (57%)

Query:    43 KLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQL 102
             +++ L  + HPN VK  GY     CL G+          MQK  LEN H+    ++V+ L
Sbjct:   139 EVNFLGRVSHPNLVKLLGY-----CLEGEELLLVYE--YMQKGSLEN-HLFRKGSAVQPL 190

Query:   103 RRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV 156
                 RL+I     + LAFLH+SEKQVIYRDFKA NILLD ++   +SDF  AK+
Sbjct:   191 SWEIRLKIAIGAAKGLAFLHASEKQVIYRDFKASNILLDGSYNAKISDFGLAKL 244

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2058847 APK2B "protein kinase 2B" [Arabidopsis thaliana (taxid:3702)]

 Score = 173 (66.0 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 50/127 (39%), Positives = 66/127 (51%)

Query:    43 KLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQL 102
             +++ L ++ HPN VK  GY     C+ G+ R        M K  LEN H+    A  + L
Sbjct:   137 EVNYLGQLSHPNLVKLVGY-----CVEGENRLLVYE--FMPKGSLEN-HLFRRGA--QPL 186

Query:   103 RRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA 162
               A R+++     + L FLH ++ QVIYRDFKA NILLD  F   LSDF  AK  A    
Sbjct:   187 TWAIRMKVAIGAAKGLTFLHDAKSQVIYRDFKAANILLDAEFNSKLSDFGLAK--AGPTG 244

Query:   163 DLTALDT 169
             D T + T
Sbjct:   245 DKTHVST 251

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2014614 AT1G76360 [Arabidopsis thaliana (taxid:3702)]

 Score = 170 (64.9 bits), Expect = 4.4e-10, P = 4.4e-10
 Identities = 49/110 (44%), Positives = 58/110 (52%)

Query:    47 LEEIFHPNQVKPSGY-WSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRA 105
             L +  HPN VK  GY W  N       ++    ++L  K  LEN H+    A    L   
Sbjct:   221 LGKFHHPNLVKLLGYCWEEN-------QFLLVYEYL-PKGSLEN-HLFSKGAEA--LPWD 269

Query:   106 ERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
              RL+I  +  Q L FLH+SEK VIYRDFKA NILLD  F   LSDF  AK
Sbjct:   270 TRLKIAIEAAQGLTFLHNSEKSVIYRDFKASNILLDSNFHAKLSDFGLAK 319

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

TAIR|locus:2012492 APK2A "protein kinase 2A" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 9.8e-10, P = 9.8e-10
 Identities = 49/130 (37%), Positives = 65/130 (50%)

Query:    43 KLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQL 102
             +++ L ++ HPN V   GY     C  G+ R        M K  LEN H+    A  + L
Sbjct:   140 EVNYLGQLSHPNLVLLVGY-----CAEGENRLLVYE--FMPKGSLEN-HLFRRGA--QPL 189

Query:   103 RRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA 162
               A R+++     + L FLH ++ QVIYRDFKA NILLD  F   LSDF  AK  A    
Sbjct:   190 TWAIRMKVAVGAAKGLTFLHEAKSQVIYRDFKAANILLDADFNAKLSDFGLAK--AGPTG 247

Query:   163 DLTALDTSSV 172
             D T + T  +
Sbjct:   248 DNTHVSTKVI 257

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2039772 BIK1 "botrytis-induced kinase1" [Arabidopsis thaliana (taxid:3702)]

 Score = 164 (62.8 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 47/127 (37%), Positives = 64/127 (50%)

Query:    43 KLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQL 102
             +++ L ++ HPN VK  GY     CL  + R        MQK  LEN H+    A  + L
Sbjct:   121 EINYLGQLSHPNLVKLIGY-----CLEDEHRLLVYE--FMQKGSLEN-HLFRRGAYFKPL 172

Query:   103 RRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA 162
                 R+ +     + LAFLHS   +VIYRD KA NILLD  +   LSDF  A+   +   
Sbjct:   173 PWFLRVNVALDAAKGLAFLHSDPVKVIYRDIKASNILLDADYNAKLSDFGLARDGPM--G 230

Query:   163 DLTALDT 169
             DL+ + T
Sbjct:   231 DLSYVST 237

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS;IDA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009620 "response to fungus" evidence=IEP

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

GO:0050832 "defense response to fungus" evidence=RCA;IMP

GO:0052033 "pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response" evidence=IMP

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

TAIR|locus:2205714 AT1G26970 [Arabidopsis thaliana (taxid:3702)]

 Score = 164 (62.8 bits), Expect = 1.6e-09, P = 1.6e-09
 Identities = 52/133 (39%), Positives = 64/133 (48%)

Query:    43 KLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQL 102
             ++D L  + H N VK  GY     C  GD       ++ M K  LEN H+    A     
Sbjct:   137 EVDCLGRLHHMNLVKLIGY-----CSKGDHIRLLVYEY-MPKGSLEN-HLFRRGAEPIPW 189

Query:   103 RRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA 162
             R   R+++     + LAFLH  E QVIYRDFKA NILLD  F   LSDF  AKV      
Sbjct:   190 RT--RIKVAIGAARGLAFLH--EAQVIYRDFKASNILLDSEFNAKLSDFGLAKVGPT--G 243

Query:   163 DLTALDTSSVSAQ 175
             D T + T  +  Q
Sbjct:   244 DRTHVSTQVMGTQ 256

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2053240 PK1B "protein kinase 1B" [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 43/113 (38%), Positives = 58/113 (51%)

Query:    43 KLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQL 102
             +++ L +  HPN VK  GY     CL  + R        M +  LEN H+    +  + L
Sbjct:   134 EVNYLGQFSHPNLVKLIGY-----CLEDEHRLLVYE--FMPRGSLEN-HLFRRGSYFQPL 185

Query:   103 RRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
                 RL++     + LAFLH++E  VIYRDFK  NILLD  +   LSDF  AK
Sbjct:   186 SWTLRLKVALGAAKGLAFLHNAETSVIYRDFKTSNILLDSEYNAKLSDFGLAK 238

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2180127 NAK [Arabidopsis thaliana (taxid:3702)]

 Score = 161 (61.7 bits), Expect = 3.0e-09, P = 3.0e-09
 Identities = 42/113 (37%), Positives = 59/113 (52%)

Query:    43 KLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQL 102
             +++ L ++ HPN VK  GY     CL  + R        M +  LEN H+       + L
Sbjct:   122 EINYLGQLDHPNLVKLIGY-----CLEEEHRLLVYE--FMTRGSLEN-HLFRRGTFYQPL 173

Query:   103 RRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
                 R+ +     + LAFLH+++ QVIYRDFKA NILLD  +   LSDF  A+
Sbjct:   174 SWNTRVRMALGAARGLAFLHNAQPQVIYRDFKASNILLDSNYNAKLSDFGLAR 226

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009617 "response to bacterium" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

TAIR|locus:2200863 AT1G61590 [Arabidopsis thaliana (taxid:3702)]

 Score = 160 (61.4 bits), Expect = 4.8e-09, P = 4.8e-09
 Identities = 52/134 (38%), Positives = 69/134 (51%)

Query:    23 VMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM 82
             V +KL + I  LQ  R+   ++  L ++ HPN VK  GY     C   +R   ++    M
Sbjct:   131 VAVKLLD-IEGLQGHREWLSEVIFLGQLKHPNLVKLIGY----CCEEEERVLIYE---FM 182

Query:    83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE 142
              +  LEN H+     S+  L  A RL+I     + LAFLH  E  +IYRDFK  NILLD 
Sbjct:   183 PRGSLEN-HLFRR-ISL-SLPWATRLKIAVAAAKGLAFLHDLESPIIYRDFKTSNILLDS 239

Query:   143 TFKCNLSDFSTAKV 156
              F   LSDF  AK+
Sbjct:   240 DFTAKLSDFGLAKM 253

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2019180 AT1G74490 [Arabidopsis thaliana (taxid:3702)]

 Score = 158 (60.7 bits), Expect = 7.1e-09, P = 7.1e-09
 Identities = 45/119 (37%), Positives = 62/119 (52%)

Query:    43 KLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQL 102
             +++ L  + HPN VK  GY   N      R   +++   +    LEN H+ E  +SV  L
Sbjct:   139 EVNYLGRLHHPNLVKLIGYSLEN----EHRLLVYEH---LPNGSLEN-HLFERSSSV--L 188

Query:   103 RRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN 161
               + R+++     + L FLH +  QVIYRDFKA NILLD  F   LSDF  AK    +N
Sbjct:   189 SWSLRMKVAIGAARGLCFLHEANDQVIYRDFKAANILLDSGFNAKLSDFGLAKEGPKDN 247

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	340
pfam13962	114	pfam13962, PGG, Domain of unknown function	1e-09
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	2e-07
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	1e-05
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-05
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-05
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-05
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	4e-05
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	5e-05
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	8e-05
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	8e-05
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	9e-05
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	9e-05
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	1e-04
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-04
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	2e-04
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	2e-04
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	3e-04
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	5e-04
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	5e-04
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	7e-04
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	8e-04
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	9e-04
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	0.001
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	0.001
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	0.001
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	0.001
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	0.001
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	0.001
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	0.001
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	0.001
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	0.002
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	0.002
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	0.002
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	0.003
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	0.003
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	0.003
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	0.003
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	0.003
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	0.004
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	0.004
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	0.004

>gnl|CDD|222475 pfam13962, PGG, Domain of unknown function

 Score = 54.8 bits (133), Expect = 1e-09
 Identities = 24/111 (21%), Positives = 45/111 (40%), Gaps = 23/111 (20%)

Query: 231 YLLLIATLLSTITFLSALKITGCKSEEGYKNNSSL----NPICQIVNQHPFYIRLVTTFN 286
            LL++ATL++T+TF +     G     GY  +        PI  +  +   +       N
Sbjct: 10  SLLVVATLIATVTFAAGFTPPG-----GYWQDDGGHHAGTPI--LAGKPRRFKAFFV-SN 61

Query: 287 SVAFFLSIALMMILFNKL-----------PLRPLLLVSAFSMLGAYMCIIS 326
           ++AF  S+  +++L   +            L  LL +S  S++ A+     
Sbjct: 62  TIAFVASLVAVILLLYIVPSFSRRLPRLLALLTLLWLSLLSLMVAFAAGSY 112

The PGG domain is named for the highly conserved sequence motif found at the startt of the domain. The function is not known. Length = 114

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 51.0 bits (122), Expect = 2e-07
 Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 18/123 (14%)

Query: 48  EEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRR--- 104
           E++ HPN V+   Y+     L  DR Y      +M    +E   +GEH  S+++ ++   
Sbjct: 64  EQLRHPNIVR---YY--KTFLENDRLYI-----VMDL--IEGAPLGEHFNSLKEKKQRFT 111

Query: 105 AERL-EIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD 163
            ER+  I  +M   L +LH  EK++++RD    NI+L E  K  ++DF  AK      + 
Sbjct: 112 EERIWNIFVQMVLALRYLHK-EKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQ-PESK 169

Query: 164 LTA 166
           LT+
Sbjct: 170 LTS 172

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 8/63 (12%)

Query: 102 LRRAERLE------IVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           LR   R E         ++ + LA+LHS  K +++RD KA N+L+D    C +SDF  +K
Sbjct: 99  LRTYGRFEEQLVRFFTEQVLEGLAYLHS--KGILHRDLKADNLLVDADGICKISDFGISK 156

Query: 156 VSA 158
            S 
Sbjct: 157 KSD 159

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 45.3 bits (108), Expect = 1e-05
 Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 3/60 (5%)

Query: 111 VTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTA-KVSAVENADLTALDT 169
           V ++ Q LA+LH  E+ VI+RD KA NIL  +     L+DF  A K++ V   D + + T
Sbjct: 105 VYQVLQGLAYLH--EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGT 162

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 3/51 (5%)

Query: 106 ERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE-TFKCNLSDFSTAK 155
           E L I+ ++ + L +LHS    +I+RD K  NILLD    K  L+DF  +K
Sbjct: 93  EILRILLQILEGLEYLHS--NGIIHRDLKPENILLDSDNGKVKLADFGLSK 141

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 45.2 bits (108), Expect = 2e-05
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           LA+LHS    +++RD K  NIL+D      L+DF  AK
Sbjct: 114 LAYLHS--NGIVHRDIKGANILVDSDGVVKLADFGCAK 149

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 44.5 bits (106), Expect = 4e-05
 Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 2/39 (5%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV 156
           L +LHS  K +I+RD K  NILLD+     ++DF TAKV
Sbjct: 115 LEYLHS--KGIIHRDLKPENILLDKDMHIKITDFGTAKV 151

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 43.8 bits (104), Expect = 5e-05
 Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)

Query: 110 IVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTAL 167
           I  ++ + L +LHS    +I+RD K  NILLDE     ++DF  AK     ++ LT  
Sbjct: 103 IALQILRGLEYLHS--NGIIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLTTF 158

Length = 260

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 43.3 bits (103), Expect = 8e-05
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 114 MCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA 162
           +   L +LHS    +IYRD K  NILLD      L+DF  AK  + E +
Sbjct: 102 IVLALEYLHS--LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS 148

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 43.5 bits (102), Expect = 8e-05
 Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 14/116 (12%)

Query: 47  LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
           L+++ HPN ++  G +           YC     L     L  VH        + L+  E
Sbjct: 75  LQQLKHPNTIEYKGCYLKEHTAWLVMEYC-----LGSASDLLEVH-------KKPLQEVE 122

Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA 162
              I     Q LA+LHS     I+RD KA NILL E  +  L+DF +A  S+  N+
Sbjct: 123 IAAITHGALQGLAYLHSHNM--IHRDIKAGNILLTEPGQVKLADFGSASKSSPANS 176

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 43.0 bits (102), Expect = 9e-05
 Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 2/34 (5%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDF 151
           L +LHS++K  I+RD KA NILL+E  +  L+DF
Sbjct: 112 LEYLHSNKK--IHRDIKAGNILLNEEGQAKLADF 143

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 43.2 bits (102), Expect = 9e-05
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 8/66 (12%)

Query: 95  HPASVRQLRRAERLE------IVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNL 148
              SVR L +A  +       I+ ++   L ++H     VI+RD KA NIL+  T    L
Sbjct: 85  EGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKV--GVIHRDIKAANILVTNTGNVKL 142

Query: 149 SDFSTA 154
            DF  A
Sbjct: 143 CDFGVA 148

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 42.8 bits (100), Expect = 1e-04
 Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 14/116 (12%)

Query: 47  LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
           L+ I HPN ++  G +           YC     L     L  VH        + L+  E
Sbjct: 79  LQRIKHPNSIEYKGCYLREHTAWLVMEYC-----LGSASDLLEVH-------KKPLQEVE 126

Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA 162
              I     Q LA+LHS    +I+RD KA NILL E  +  L+DF +A +++  N+
Sbjct: 127 IAAITHGALQGLAYLHS--HNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANS 180

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 42.1 bits (100), Expect = 2e-04
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)

Query: 109 EIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
             + ++   L +LHS  K +++RD K  NILLDE     L+DF  A+
Sbjct: 101 FYLRQILSALEYLHS--KGIVHRDLKPENILLDEDGHVKLADFGLAR 145

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 42.6 bits (100), Expect = 2e-04
 Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 3/49 (6%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTA 166
           L FLH  +K +IYRD K  N+LLD    C L+DF   K   + N   T+
Sbjct: 109 LMFLH--DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK-EGIFNGKTTS 154

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 2/61 (3%)

Query: 102 LRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN 161
           L+  E   I     Q LA+LHS E+  I+RD KA NILL E     L+DF +A + +  N
Sbjct: 112 LQEVEIAAICHGALQGLAYLHSHER--IHRDIKAGNILLTEPGTVKLADFGSASLVSPAN 169

Query: 162 A 162
           +
Sbjct: 170 S 170

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV 156
             +LH+  + +IYRD K  N+LLD      L DF  AK 
Sbjct: 106 FEYLHN--RGIIYRDLKPENLLLDSNGYVKLVDFGFAKK 142

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 41.0 bits (96), Expect = 5e-04
 Identities = 19/59 (32%), Positives = 37/59 (62%), Gaps = 4/59 (6%)

Query: 108 LEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTA 166
           +++  ++ + +AF+    K  I+RD +A NIL+ ET  C ++DF  A++  +E+ + TA
Sbjct: 105 IDMAAQIAEGMAFIE--RKNYIHRDLRAANILVSETLCCKIADFGLARL--IEDNEYTA 159

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 40.8 bits (96), Expect = 5e-04
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           L FLH  E+ +IYRD K  N+LLD      ++DF   K
Sbjct: 109 LQFLH--ERGIIYRDLKLDNVLLDSEGHIKIADFGMCK 144

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 40.6 bits (95), Expect = 7e-04
 Identities = 20/38 (52%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           L FLH     VIYRD K  NILLD    C L+DF   K
Sbjct: 109 LMFLH--RHGVIYRDLKLDNILLDAEGHCKLADFGMCK 144

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 40.2 bits (94), Expect = 8e-04
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 6/57 (10%)

Query: 113 KMCQDLAFLHSSEKQVIYRDFKAPNILLDETFK-CNLSDFSTAKVSAVENADLTALD 168
           ++ + L++LH  E Q+I+RD K  N+L+D T +   ++DF  A   A   A  T   
Sbjct: 111 QLLRGLSYLH--ENQIIHRDVKGANLLIDSTGQRLRIADFGAA---ARLAAKGTGAG 162

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 40.4 bits (94), Expect = 9e-04
 Identities = 35/116 (30%), Positives = 49/116 (42%), Gaps = 14/116 (12%)

Query: 47  LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
           L+++ HPN ++  G +           YC     L     L  VH        + L+  E
Sbjct: 69  LQKLRHPNTIQYRGCYLREHTAWLVMEYC-----LGSASDLLEVH-------KKPLQEVE 116

Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA 162
              +     Q LA+LHS    +I+RD KA NILL E     L DF +A + A  N 
Sbjct: 117 IAAVTHGALQGLAYLHS--HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX 170

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 39.8 bits (94), Expect = 0.001
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 100 RQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDF 151
            +L   + L++  ++ + + +L S  K  ++RD  A N L+ E     +SDF
Sbjct: 97  EKLTLKDLLQMALQIAKGMEYLES--KNFVHRDLAARNCLVTENLVVKISDF 146

Length = 258

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 39.9 bits (93), Expect = 0.001
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 6/54 (11%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTALDTSS 171
           LA  H  +  ++YRD K  NILLD T    L DF  +K      A+LT   T++
Sbjct: 107 LALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSK------ANLTDNKTTN 154

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 39.8 bits (94), Expect = 0.001
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 3/49 (6%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTA-KVSAVENADLT 165
           L +LHS    +++RD K  NIL++      L+DF  A   +   +AD T
Sbjct: 113 LQYLHS--NGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYT 159

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 39.7 bits (93), Expect = 0.001
 Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 2/57 (3%)

Query: 100 RQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV 156
           + L  A  +++  ++ + +A+L   E+  I+RD  A NIL+ E   C ++DF  A++
Sbjct: 99  QVLPVASLIDMACQVAEGMAYLE--EQNSIHRDLAARNILVGEDLVCKVADFGLARL 153

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           L +LHS    +I+RD KA NILL    +  L DF  + 
Sbjct: 111 LEYLHS--NGIIHRDIKAANILLTSDGEVKLIDFGLSA 146

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 39.7 bits (93), Expect = 0.001
 Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 5/49 (10%)

Query: 110 IVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA 158
           +  +M + L FLHS   +VI+RD KA NILL       L+DF    VSA
Sbjct: 108 VCRQMLEALNFLHS--HKVIHRDLKAGNILLTLDGDVKLADFG---VSA 151

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 28/73 (38%), Positives = 35/73 (47%), Gaps = 13/73 (17%)

Query: 104 RAERLEIVTK---MCQ---DLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK-- 155
           RA  LE V K   M Q    L ++HS    VI+RD K  NILL+   +  L+DF  A+  
Sbjct: 100 RANILEDVHKRYIMYQLLKALKYIHSGN--VIHRDLKPSNILLNSDCRVKLADFGLARSL 157

Query: 156 ---VSAVENADLT 165
                  EN  LT
Sbjct: 158 SELEENPENPVLT 170

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 3/50 (6%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTA-KVSAVENADLTA 166
           L +LHS  K +I+RD K  NILLDE    +++DF+ A KV+       T+
Sbjct: 113 LEYLHS--KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTS 160

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 39.4 bits (93), Expect = 0.002
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 12/75 (16%)

Query: 82  MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLD 141
           ++K+  E     E           + L+   ++C  L +LHS  +++++RD K  NI L 
Sbjct: 90  IKKQKKEGKPFPEE----------QILDWFVQLCLALKYLHS--RKILHRDIKPQNIFLT 137

Query: 142 ETFKCNLSDFSTAKV 156
                 L DF  +KV
Sbjct: 138 SNGLVKLGDFGISKV 152

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 39.0 bits (89), Expect = 0.002
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)

Query: 94  EHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE-TFKCNLSDFS 152
           +       L  +E L I+ ++   L +LH   K +I+RD K  NILLD       L DF 
Sbjct: 90  KKIGRKGPLSESEALFILAQILSALEYLH--SKGIIHRDIKPENILLDRDGRVVKLIDFG 147

Query: 153 TAKVS 157
            AK+ 
Sbjct: 148 LAKLL 152

Length = 384

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 3/57 (5%)

Query: 110 IVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK-VSAVENADLT 165
            + ++ Q +A+ HS    +I+RD K  NIL+ E+    L DF  A+ + A   + LT
Sbjct: 105 YIWQLLQAIAYCHS--HNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLT 159

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 38.8 bits (90), Expect = 0.003
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)

Query: 108 LEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV 156
           L+   +MC  L   H  EK+V++RD K+ NI L +  K  L DF +A++
Sbjct: 103 LQWFVQMC--LGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARL 149

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 38.5 bits (90), Expect = 0.003
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 114 MCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLT 165
           + Q LAF HS    +++RD K  N+L++      L+DF  A+         T
Sbjct: 107 LLQGLAFCHSH--GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYT 156

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 38.7 bits (91), Expect = 0.003
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)

Query: 115 CQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDF 151
            Q L +LHS  + VI+RD K+ NILL +     L+DF
Sbjct: 126 LQGLEYLHS--QNVIHRDIKSDNILLSKDGSVKLADF 160

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 38.4 bits (90), Expect = 0.003
 Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 5/49 (10%)

Query: 110 IVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA 158
           I+ +  + LA+LH  E +VI+RD K  NILL +  +  L DF    VSA
Sbjct: 118 ILRETLRGLAYLH--ENKVIHRDIKGQNILLTKNAEVKLVDFG---VSA 161

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 38.6 bits (90), Expect = 0.003
 Identities = 18/46 (39%), Positives = 23/46 (50%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD 163
           LA  H  +  +IYRD K  NILLD      L+DF  +K    E  +
Sbjct: 116 LALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEE 161

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 38.2 bits (89), Expect = 0.004
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 2/59 (3%)

Query: 99  VRQLRRAERLEIVTKMCQDL--AFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           +R+ +     E +  MC D+  A  +      I+RD  A N L+ E     +SDF  A+
Sbjct: 90  LRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLAR 148

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 38.1 bits (89), Expect = 0.004
 Identities = 21/69 (30%), Positives = 26/69 (37%), Gaps = 9/69 (13%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTALDTSSVSAQSG 177
           LA+LHS    +++RD K  NI LD      L DF  A      N       T+       
Sbjct: 112 LAYLHS--HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLK-NNT------TTMGEEVQS 162

Query: 178 KTGMEMKMA 186
             G    MA
Sbjct: 163 LAGTPAYMA 171

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 38.3 bits (89), Expect = 0.004
 Identities = 17/38 (44%), Positives = 22/38 (57%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           LAF +   K +IYRD K  N+LLD      ++DF  AK
Sbjct: 129 LAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAK 166

Length = 329

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	340
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.98
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.98
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.98
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.98
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.98
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.98
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.98
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.98
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.98
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.98
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.98
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.98
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.98
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.98
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.98
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.98
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.98
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.98
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.98
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.98
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.98
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.98
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.98
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.98
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.98
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.98
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.98
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.98
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.98
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.97
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.97
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.97
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.97
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.97
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.97
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.97
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.97
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.97
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.97
PHA03210	501	serine/threonine kinase US3; Provisional	99.97
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.97
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.97
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.97
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.97
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.97
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.97
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.97
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.97
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.97
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.97
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.97
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.97
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.97
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.97
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.97
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.97
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.97
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.97
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.97
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.97
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.97
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.97
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.97
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.97
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.97
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.97
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.97
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.97
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.97
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.97
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.97
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.97
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.97
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.97
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.97
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.97
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.97
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.97
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.97
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.97
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.97
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.97
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.97
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.97
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.97
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.97
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.97
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.97
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.97
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.97
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.97
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.97
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.97
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.97
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.97
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.97
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.97
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.97
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.97
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.97
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.97
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.97
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.97
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.97
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.97
PLN00009	294	cyclin-dependent kinase A; Provisional	99.97
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.97
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.97
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.97
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.97
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.97
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.97
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.97
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.97
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.97
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.97
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.97
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.97
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.97
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.97
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.97
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.97
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.97
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.97
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.97
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.97
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.97
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.97
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.97
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.97
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.97
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.97
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.97
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.97
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.97
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.97
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.97
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.97
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.97
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.97
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.97
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.97
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.97
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.97
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.97
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.97
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.97
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.97
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.97
KOG3653	534	consensus Transforming growth factor beta/activin	99.97
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.96
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.96
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.96
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.96
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.96
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.96
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.96
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.96
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.96
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.96
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.96
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.96
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.96
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.96
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.96
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.96
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.96
PHA02882	294	putative serine/threonine kinase; Provisional	99.96
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.95
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.95
KOG1152	772	consensus Signal transduction serine/threonine kin	99.95
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.95
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.95
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.95
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.94
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.94
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.93
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.93
PRK09188	365	serine/threonine protein kinase; Provisional	99.93
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.92
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.92
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.9
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.9
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.9
PLN00181	793	protein SPA1-RELATED; Provisional	99.9
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.9
PRK10345	210	hypothetical protein; Provisional	99.89
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.88
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.86
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.85
smart00090	237	RIO RIO-like kinase.	99.85
PRK12274	218	serine/threonine protein kinase; Provisional	99.85
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.84
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.83
PRK14879	211	serine/threonine protein kinase; Provisional	99.79
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.79
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.78
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.78
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.78
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.77
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.76
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.76
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.76
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.75
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.72
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.66
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.63
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.61
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.6
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.59
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.56
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.56
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.56
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.55
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.5
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.48
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.46
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.43
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.34
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.32
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.29
KOG3087	229	consensus Serine/threonine protein kinase [General	99.18
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.17
KOG1243	690	consensus Protein kinase [General function predict	99.08
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.08
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.08
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.03
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.99
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.99
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.97
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.72
PRK09902	216	hypothetical protein; Provisional	98.57
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.54
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.51
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.47
PF01636	239	APH: Phosphotransferase enzyme family This family	98.41
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.41
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.34
KOG1235	538	consensus Predicted unusual protein kinase [Genera	98.15
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.14
PLN02876	822	acyl-CoA dehydrogenase	98.13
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	98.05
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	98.03
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.01
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.9
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.88
KOG2137	700	consensus Protein kinase [Signal transduction mech	97.86
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.85
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	97.69
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.6
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.52
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.49
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.44
PLN02236	344	choline kinase	97.44
PRK10593	297	hypothetical protein; Provisional	97.41
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.36
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	97.35
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.17
PRK05231	319	homoserine kinase; Provisional	97.07
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	96.98
KOG2270	520	consensus Serine/threonine protein kinase involved	96.76
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	96.75
COG4248	637	Uncharacterized protein with protein kinase and he	96.73
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	96.36
PRK06148	1013	hypothetical protein; Provisional	96.29
KOG2268	465	consensus Serine/threonine protein kinase [Signal	96.25
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	96.16
PTZ00384	383	choline kinase; Provisional	96.02
PTZ00296	442	choline kinase; Provisional	95.76
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	95.7
PRK11768	325	serine/threonine protein kinase; Provisional	95.6
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	95.6
PRK10271	188	thiK thiamine kinase; Provisional	95.05
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	94.9
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	94.75
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	94.54
PHA03111	444	Ser/Thr kinase; Provisional	94.51
PRK12396	409	5-methylribose kinase; Reviewed	94.48
PLN02756	418	S-methyl-5-thioribose kinase	94.31
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	94.25

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=8.9e-52  Score=354.38  Aligned_cols=243  Identities=19%  Similarity=0.166  Sum_probs=201.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      +|..|+||+++++.|++.+|+|.+....+....+++.+|++++++++||+||++||.|+++..      ...++||||.+
T Consensus        89 ~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~------~isI~mEYMDg  162 (364)
T KOG0581|consen   89 SGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE------EISICMEYMDG  162 (364)
T ss_pred             cCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc------eEEeehhhcCC
Confidence            678899999999999999999999777777888999999999999999999999999975531      36699999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCcc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADL  164 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~  164 (340)
                      |||+++++..++     ++|.....++.+|++||.|||+. .+||||||||+|||+++.|++||||||.++.+... ...
T Consensus       163 GSLd~~~k~~g~-----i~E~~L~~ia~~VL~GL~YLh~~-~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS-~a~  235 (364)
T KOG0581|consen  163 GSLDDILKRVGR-----IPEPVLGKIARAVLRGLSYLHEE-RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS-IAN  235 (364)
T ss_pred             CCHHHHHhhcCC-----CCHHHHHHHHHHHHHHHHHHhhc-cCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-hcc
Confidence            999999998876     99999999999999999999941 66999999999999999999999999999988776 678


Q ss_pred             eeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhcc
Q 019481          165 TALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTIT  243 (340)
Q Consensus       165 ~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  243 (340)
                      ++.||..||+||.+.+--+- -.|+||.|.+..+.+.+.++++..              ..++...      .++...|.
T Consensus       236 tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~--------------~~~~~~~------~~Ll~~Iv  295 (364)
T KOG0581|consen  236 TFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPP--------------NPPYLDI------FELLCAIV  295 (364)
T ss_pred             cccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCc--------------CCCCCCH------HHHHHHHh
Confidence            99999999999877764332 357888887777777766555422              0111111      22334455


Q ss_pred             ccccCcCCcc-ccc-------cccccCCCCchHHHHhhcCcceee
Q 019481          244 FLSALKITGC-KSE-------EGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       244 ~~~~~~~p~~-~~~-------~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                      .+.+|.+|.. +|+       .||++||++||++++|++|||+.+
T Consensus       296 ~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~  340 (364)
T KOG0581|consen  296 DEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKK  340 (364)
T ss_pred             cCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhh
Confidence            6777888886 666       589999999999999999999943

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.4e-52  Score=359.96  Aligned_cols=241  Identities=17%  Similarity=0.164  Sum_probs=188.6

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchh------hHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQ------LRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWK   77 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~------~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~   77 (340)
                      .+|+||.|.+|..++|++.||+|++++.....      ....+.+|+++|++|+|||||+++++|+       +..+.|+
T Consensus       181 GsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~-------~~ds~Ym  253 (475)
T KOG0615|consen  181 GSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFE-------VPDSSYM  253 (475)
T ss_pred             cCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeee-------cCCceEE
Confidence            37999999999999999999999999733221      2344689999999999999999999775       4557799


Q ss_pred             eeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCC---CceEEeccccc
Q 019481           78 NKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDET---FKCNLSDFSTA  154 (340)
Q Consensus        78 ~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~---~~~kl~DFGla  154 (340)
                      ||||++||+|.+.+-.++.     +.+..-+.+++|++.|+.|||+  +||+||||||+|||+..+   ..+||+|||+|
T Consensus       254 VlE~v~GGeLfd~vv~nk~-----l~ed~~K~~f~Qll~avkYLH~--~GI~HRDiKPeNILl~~~~e~~llKItDFGlA  326 (475)
T KOG0615|consen  254 VLEYVEGGELFDKVVANKY-----LREDLGKLLFKQLLTAVKYLHS--QGIIHRDIKPENILLSNDAEDCLLKITDFGLA  326 (475)
T ss_pred             EEEEecCccHHHHHHhccc-----cccchhHHHHHHHHHHHHHHHH--cCcccccCCcceEEeccCCcceEEEecccchh
Confidence            9999999999999999887     9999999999999999999999  889999999999999765   78999999999


Q ss_pred             eeecccCCcceeeccceeeccCccccchhhhh----HhHhCCccccccccccccCCCCCCcccc-cCCCccCCch-----
Q 019481          155 KVSAVENADLTALDTSSVSAQSGKTGMEMKMA----QLESGGWRAHDEAEKAFQWPYKSSHLKN-TRPNLKTENE-----  224 (340)
Q Consensus       155 ~~~~~~~~~~~~~gt~~~~~p~~~~~~~~~~~----~~~s~g~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~-----  224 (340)
                      +...+..-..|+|||+.|.|||...+.++-.+    |+||.|+..+....+.  .||..+.... +..++.+|..     
T Consensus       327 K~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~--pPFS~~~~~~sl~eQI~~G~y~f~p~  404 (475)
T KOG0615|consen  327 KVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGY--PPFSEEYTDPSLKEQILKGRYAFGPL  404 (475)
T ss_pred             hccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccC--CCcccccCCccHHHHHhcCcccccCh
Confidence            99998888899999999999977665554422    4555555554444433  4444443332 3333333322     


Q ss_pred             hHHHHHHHHHHHHhhhhccccccCcCCccccccccccCCCCchHHHHhhcCcce
Q 019481          225 TWNNFLYLLLIATLLSTITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .|......+                  .++...+|..||++|||++++|+|||+
T Consensus       405 ~w~~Iseea------------------~dlI~~mL~VdP~~R~s~~eaL~hpW~  440 (475)
T KOG0615|consen  405 QWDRISEEA------------------LDLINWMLVVDPENRPSADEALNHPWF  440 (475)
T ss_pred             hhhhhhHHH------------------HHHHHHhhEeCcccCcCHHHHhcChhh
Confidence            222222221                  122336699999999999999999999

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=8.9e-49  Score=354.38  Aligned_cols=234  Identities=19%  Similarity=0.212  Sum_probs=185.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeec--cCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHEL--ITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~--~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|||+.||++++..+|+.||+|++.+  ..+....+.+.+|++|.++|+|||||+++++|+       |.+++|++.|+|
T Consensus        28 kGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FE-------Ds~nVYivLELC  100 (592)
T KOG0575|consen   28 KGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFE-------DSNNVYIVLELC  100 (592)
T ss_pred             cCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEee-------cCCceEEEEEec
Confidence            69999999999999999999999986  233455677999999999999999999999887       445888999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc-cC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-EN  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-~~  161 (340)
                      +.|+|.++++.++.     ++|.+++.+++||+.||.|||+  ++|+|||||..|++++++.++||+|||||..+.. ++
T Consensus       101 ~~~sL~el~Krrk~-----ltEpEary~l~QIv~GlkYLH~--~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~E  173 (592)
T KOG0575|consen  101 HRGSLMELLKRRKP-----LTEPEARYFLRQIVEGLKYLHS--LGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGE  173 (592)
T ss_pred             CCccHHHHHHhcCC-----CCcHHHHHHHHHHHHHHHHHHh--cCceecccchhheeecCcCcEEecccceeeeecCccc
Confidence            99999999997665     9999999999999999999999  8899999999999999999999999999999885 48


Q ss_pred             CcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHH-HHHHHhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYL-LLIATLLS  240 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~  240 (340)
                      ...|.||||.|.|||.....             .+.++.|.  |+     .||+.+.++.|.+||..-.-. ...+.-  
T Consensus       174 rk~TlCGTPNYIAPEVl~k~-------------gHsfEvDi--WS-----lGcvmYtLL~G~PPFetk~vkety~~Ik--  231 (592)
T KOG0575|consen  174 RKKTLCGTPNYIAPEVLNKS-------------GHSFEVDI--WS-----LGCVMYTLLVGRPPFETKTVKETYNKIK--  231 (592)
T ss_pred             ccceecCCCcccChhHhccC-------------CCCCchhh--hh-----hhhHHHhhhhCCCCcccchHHHHHHHHH--
Confidence            88999999999999543322             22222222  55     555555555555555542111 110101  


Q ss_pred             hccccccCcCC-------ccccccccccCCCCchHHHHhhcCcce
Q 019481          241 TITFLSALKIT-------GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~~~~~p-------~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                          ...-.+|       .++....|++||++|||+++++.|+|+
T Consensus       232 ----~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff  272 (592)
T KOG0575|consen  232 ----LNEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFF  272 (592)
T ss_pred             ----hcCcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhh
Confidence                1111222       234446799999999999999999999

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=6e-47  Score=327.59  Aligned_cols=237  Identities=21%  Similarity=0.178  Sum_probs=192.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .+|+||+||+|+++.++..||||.+.+.. ..+..+.+..|+.+|+.++|||||++++.       ..+++++|+|||||
T Consensus        19 G~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~-------~~~~~~i~lVMEyC   91 (429)
T KOG0595|consen   19 GSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDC-------IEDDDFIYLVMEYC   91 (429)
T ss_pred             cCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEE-------EecCCeEEEEEEeC
Confidence            47999999999999999999999998754 45667888999999999999999999994       34666999999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCC------CceEEecccccee
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDET------FKCNLSDFSTAKV  156 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~------~~~kl~DFGla~~  156 (340)
                      .||||.++|+.++.     ++|.+++.++.||+.||++||+  ++||||||||+||||+.+      -.+||+|||+||.
T Consensus        92 ~gGDLs~yi~~~~~-----l~e~t~r~Fm~QLA~alq~L~~--~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~  164 (429)
T KOG0595|consen   92 NGGDLSDYIRRRGR-----LPEATARHFMQQLASALQFLHE--NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARF  164 (429)
T ss_pred             CCCCHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeeeccCCcceEEeccCCCCCCCceEEecccchhhh
Confidence            99999999999887     9999999999999999999999  999999999999999875      4589999999999


Q ss_pred             ecccCCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHH
Q 019481          157 SAVENADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIA  236 (340)
Q Consensus       157 ~~~~~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (340)
                      +.++.-..+.||++.||||      |+++..       -|+-  ..+.|+     .|++..++.+|..||+......+. 
T Consensus       165 L~~~~~a~tlcGSplYMAP------EV~~~~-------~YdA--KADLWS-----iG~Ilyq~l~g~~Pf~a~t~~eL~-  223 (429)
T KOG0595|consen  165 LQPGSMAETLCGSPLYMAP------EVIMSQ-------QYDA--KADLWS-----IGTILYQCLTGKPPFDAETPKELL-  223 (429)
T ss_pred             CCchhHHHHhhCCccccCH------HHHHhc-------cccc--hhhHHH-----HHHHHHHHHhCCCCccccCHHHHH-
Confidence            9998888999999999999      555321       1111  233466     777777777777777754333111 


Q ss_pred             Hhhhhccccc--cCcCCcccccc-------ccccCCCCchHHHHhhcCcce
Q 019481          237 TLLSTITFLS--ALKITGCKSEE-------GYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       237 ~~~~~~~~~~--~~~~p~~~~~~-------~l~~dP~~R~t~~~ll~hp~~  278 (340)
                         ..+....  .|.+|...+..       .+++||..|.+..+-..|+++
T Consensus       224 ---~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l  271 (429)
T KOG0595|consen  224 ---LYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFL  271 (429)
T ss_pred             ---HHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhc
Confidence               1222222  25555555443       388999999998888889888

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=6.7e-47  Score=324.27  Aligned_cols=236  Identities=22%  Similarity=0.169  Sum_probs=181.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc--CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI--TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.|+.++.++|++.+|+|++++.  ......+...+|..+|.+++||+||+++..|+       +....|+|+||
T Consensus        34 GkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQ-------t~~kLylVld~  106 (357)
T KOG0598|consen   34 GKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQ-------TEEKLYLVLDY  106 (357)
T ss_pred             eccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecc-------cCCeEEEEEec
Confidence            3699999999999999999999999873  22345677899999999999999999999887       45588899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee-eccc
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV-SAVE  160 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~-~~~~  160 (340)
                      ++||+|+.+|.+++.     ++|..++.|+.+|+.||.|||+  ++||||||||+|||+|.+|+++|+|||+|+. ...+
T Consensus       107 ~~GGeLf~hL~~eg~-----F~E~~arfYlaEi~lAL~~LH~--~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~  179 (357)
T KOG0598|consen  107 LNGGELFYHLQREGR-----FSEDRARFYLAEIVLALGYLHS--KGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG  179 (357)
T ss_pred             cCCccHHHHHHhcCC-----cchhHHHHHHHHHHHHHHHHHh--CCeeeccCCHHHeeecCCCcEEEeccccchhcccCC
Confidence            999999999999888     9999999999999999999999  8899999999999999999999999999995 4445


Q ss_pred             CCcceeeccceeeccCccccchhhhh-HhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMKMA-QLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~~~-~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      ....++|||+.|||||.....++... |.||.|...|++.++.  .||.......+...                     
T Consensus       180 ~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~--pPF~~~~~~~~~~~---------------------  236 (357)
T KOG0598|consen  180 DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGK--PPFYAEDVKKMYDK---------------------  236 (357)
T ss_pred             CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCC--CCCcCccHHHHHHH---------------------
Confidence            67778999999999954333333221 3333333333332222  33333333222222                     


Q ss_pred             hhccccccCcCCccccc-------cccccCCCCch----HHHHhhcCcce
Q 019481          240 STITFLSALKITGCKSE-------EGYKNNSSLNP----ICQIVNQHPFY  278 (340)
Q Consensus       240 ~~~~~~~~~~~p~~~~~-------~~l~~dP~~R~----t~~~ll~hp~~  278 (340)
                        |..+..+.+|..++.       ..|++||++|.    .++++.+|||+
T Consensus       237 --I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF  284 (357)
T KOG0598|consen  237 --ILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFF  284 (357)
T ss_pred             --HhcCcCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCccc
Confidence              222222344443333       55999999996    48899999999

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-45  Score=318.86  Aligned_cols=241  Identities=22%  Similarity=0.221  Sum_probs=190.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||+||++.+.++++..|+|.+....... .+.+.+|+++|++++|||||+++|.....     +...+++.|||+++
T Consensus        27 ~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~-----~~~~~~i~mEy~~~  100 (313)
T KOG0198|consen   27 RGSFGSVYLATNKKTGELMAVKSVELEDSPT-SESLEREIRILSRLNHPNIVQYYGSSSSR-----ENDEYNIFMEYAPG  100 (313)
T ss_pred             CccceEEEEEEecCCCcceeeeeeecccchh-HHHHHHHHHHHHhCCCCCEEeeCCccccc-----cCeeeEeeeeccCC
Confidence            4999999999999999999999998653333 67789999999999999999999943211     11368899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC-CCceEEeccccceeecc----
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE-TFKCNLSDFSTAKVSAV----  159 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~-~~~~kl~DFGla~~~~~----  159 (340)
                      |||.+++.+.+.    .+++..++.+++||++||.|||+  ++|+||||||+|||++. ++.+||+|||+++....    
T Consensus       101 GsL~~~~~~~g~----~l~E~~v~~ytr~iL~GL~ylHs--~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~  174 (313)
T KOG0198|consen  101 GSLSDLIKRYGG----KLPEPLVRRYTRQILEGLAYLHS--KGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTK  174 (313)
T ss_pred             CcHHHHHHHcCC----CCCHHHHHHHHHHHHHHHHHHHh--CCEeccCcccceEEEeCCCCeEEeccCcccccccccccc
Confidence            999999998873    29999999999999999999999  88999999999999999 79999999999987763    


Q ss_pred             cCCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHH-HHHHHHHHh
Q 019481          160 ENADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNF-LYLLLIATL  238 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~  238 (340)
                      ........||+.||||+.+..-+..       +       ...|.|+     +||+..+|.+|.+||... ...    ..
T Consensus       175 ~~~~~~~~Gtp~~maPEvi~~g~~~-------~-------~~sDiWS-----lGCtVvEM~Tg~~PW~~~~~~~----~~  231 (313)
T KOG0198|consen  175 SDSELSVQGTPNYMAPEVIRNGEVA-------R-------RESDIWS-----LGCTVVEMLTGKPPWSEFFEEA----EA  231 (313)
T ss_pred             ccccccccCCccccCchhhcCCCcC-------C-------ccchhhh-----cCCEEEeccCCCCcchhhcchH----HH
Confidence            2234467789888888444321111       0       1334488     899999999999999885 221    12


Q ss_pred             hhhcccc-ccCcCCccccc-------cccccCCCCchHHHHhhcCcceee
Q 019481          239 LSTITFL-SALKITGCKSE-------EGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       239 ~~~~~~~-~~~~~p~~~~~-------~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                      +..+... ..|.+|..++.       .|+++||.+||||++||+|||+..
T Consensus       232 ~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~  281 (313)
T KOG0198|consen  232 LLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ  281 (313)
T ss_pred             HHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence            2222222 34677766654       689999999999999999999944

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-45  Score=327.23  Aligned_cols=246  Identities=16%  Similarity=0.149  Sum_probs=193.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+|++|++|+++.+++.||+|+++++.  .+...+-+.+|-++|.+| .||.|++||.+|+       |+..+|.++||
T Consensus        83 eGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQ-------D~~sLYFvLe~  155 (604)
T KOG0592|consen   83 EGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQ-------DEESLYFVLEY  155 (604)
T ss_pred             cccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEee-------cccceEEEEEe
Confidence            5999999999999999999999998632  233345578999999999 7999999999887       44578899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.++|++.+.     |++..++.|+.||+.||+|||+  +|||||||||||||||.+|++||+|||.|+.+.+..
T Consensus       156 A~nGdll~~i~K~Gs-----fde~caR~YAAeIldAleylH~--~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~  228 (604)
T KOG0592|consen  156 APNGDLLDLIKKYGS-----FDETCARFYAAEILDALEYLHS--NGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQ  228 (604)
T ss_pred             cCCCcHHHHHHHhCc-----chHHHHHHHHHHHHHHHHHHHh--cCceeccCChhheeEcCCCcEEEeeccccccCChhh
Confidence            999999999999988     9999999999999999999999  779999999999999999999999999999886533


Q ss_pred             Cc--------------ceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHH
Q 019481          162 AD--------------LTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWN  227 (340)
Q Consensus       162 ~~--------------~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (340)
                      ..              .+++||..|++|      |++...       ....  ..+.|.     +||+..+|..|.+||.
T Consensus       229 ~~~~~~~~~~~a~s~~~SFVGTAeYVSP------ElL~~~-------~~~~--~sDiWA-----lGCilyQmlaG~PPFr  288 (604)
T KOG0592|consen  229 KSQENPVDPNQASSRRSSFVGTAEYVSP------ELLNDS-------PAGP--SSDLWA-----LGCILYQMLAGQPPFR  288 (604)
T ss_pred             ccccCccCcccccCcccceeeeecccCH------HHhcCC-------CCCc--ccchHH-----HHHHHHHHhcCCCCCc
Confidence            22              335566655555      655322       1122  334488     8999999999999998


Q ss_pred             HHHHHHHHHHhhhhccccccCcCC---ccccccccccCCCCchHHHHhhcCcceeeeehhhH
Q 019481          228 NFLYLLLIATLLSTITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYIRLVTTFN  286 (340)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~~~~~~~~  286 (340)
                      ...+..... -+..+.+.-++..|   .++.+..|.+||+.|+|+++|..|||| ....+.|
T Consensus       289 a~NeyliFq-kI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF-~~Vdw~n  348 (604)
T KOG0592|consen  289 AANEYLIFQ-KIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFF-EGVDWEN  348 (604)
T ss_pred             cccHHHHHH-HHHHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCccc-ccCChhh
Confidence            755543332 23334444443333   445667899999999999999999999 4343333

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=4.1e-45  Score=304.67  Aligned_cols=242  Identities=16%  Similarity=0.173  Sum_probs=182.1

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeec-cCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHEL-ITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~-~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||+||+|++++||+.||||.+-. .++....+-.+||+++|++++|+|+|.|.+.|.       .....++|+|||
T Consensus        11 GEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFr-------rkrklhLVFE~~   83 (396)
T KOG0593|consen   11 GEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFR-------RKRKLHLVFEYC   83 (396)
T ss_pred             ccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHH-------hcceeEEEeeec
Confidence            469999999999999999999999865 333445566789999999999999999999775       444788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec-ccC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA-VEN  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~-~~~  161 (340)
                      +. ++.+.+.....    +++.+.+..++.|++.|+.|+|+  +++|||||||+|||++.+|.+||||||.||.+. +++
T Consensus        84 dh-TvL~eLe~~p~----G~~~~~vk~~l~Q~l~ai~~cHk--~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd  156 (396)
T KOG0593|consen   84 DH-TVLHELERYPN----GVPSELVKKYLYQLLKAIHFCHK--NNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGD  156 (396)
T ss_pred             ch-HHHHHHHhccC----CCCHHHHHHHHHHHHHHhhhhhh--cCeecccCChhheEEecCCcEEeccchhhHhhcCCcc
Confidence            86 66666666654    49999999999999999999999  889999999999999999999999999999887 333


Q ss_pred             CcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHH---HHHHHh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYL---LLIATL  238 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~  238 (340)
                      .-+.      |.|+..|.+||...      |-+.|.-.++  .|+     .||+..|+.+|++-||.-..+   ..+...
T Consensus       157 ~YTD------YVATRWYRaPELLv------GDtqYG~pVD--iWA-----iGCv~aEl~~G~pL~PG~SDiDQLy~I~kt  217 (396)
T KOG0593|consen  157 NYTD------YVATRWYRAPELLV------GDTQYGKPVD--IWA-----IGCVFAELLTGEPLWPGRSDIDQLYLIRKT  217 (396)
T ss_pred             hhhh------hhhhhhccChhhhc------ccCcCCCccc--chh-----hhHHHHHHhcCCcCCCCcchHHHHHHHHHH
Confidence            3323      55555566667664      3333333334  488     889999999988888763332   222111


Q ss_pred             hhhc-----------cccccCcC-----Ccc--------------ccccccccCCCCchHHHHhhcCcce
Q 019481          239 LSTI-----------TFLSALKI-----TGC--------------KSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       239 ~~~~-----------~~~~~~~~-----p~~--------------~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ....           .+-....+     |+.              +-..||+.||++|+++++|++||||
T Consensus       218 LG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yF  287 (396)
T KOG0593|consen  218 LGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYF  287 (396)
T ss_pred             HcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHH
Confidence            1111           00011111     111              1236899999999999999999999

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-45  Score=321.44  Aligned_cols=247  Identities=19%  Similarity=0.153  Sum_probs=180.9

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|+.+.+++.||||..+++........-+||+..|++|+ |||||++++.|.+      ....+|+|||||
T Consensus        19 GDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d------~~~~L~fVfE~M   92 (538)
T KOG0661|consen   19 GDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRD------NDRILYFVFEFM   92 (538)
T ss_pred             cCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhc------cCceEeeeHHhh
Confidence            369999999999999999999999986443333444579999999999 9999999995532      222789999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      +. +|+++++.+++    .|++..++.|+.||++||+|+|.  +|+.|||+||||||+..+..+||+|||+||.+....+
T Consensus        93 d~-NLYqLmK~R~r----~fse~~irnim~QilqGL~hiHk--~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpP  165 (538)
T KOG0661|consen   93 DC-NLYQLMKDRNR----LFSESDIRNIMYQILQGLAHIHK--HGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPP  165 (538)
T ss_pred             hh-hHHHHHhhcCC----cCCHHHHHHHHHHHHHHHHHHHh--cCcccccCChhheEecccceeEecccccccccccCCC
Confidence            75 99999999865    69999999999999999999999  8899999999999999999999999999999998888


Q ss_pred             cceeeccceeeccC------------ccccchhhhhHhHhCCccccccccccccCCCCCCccc--ccCCCccC-CchhHH
Q 019481          163 DLTALDTSSVSAQS------------GKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLK--NTRPNLKT-ENETWN  227 (340)
Q Consensus       163 ~~~~~gt~~~~~p~------------~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~-~~~~~~  227 (340)
                      -+.++.|++|.|||            |+|+.|++++|+.+          ....+|...+..+  .+..-+.+ +...|+
T Consensus       166 YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~s----------LrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~  235 (538)
T KOG0661|consen  166 YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYS----------LRPLFPGASEIDQIYKICEVLGTPDKDSWP  235 (538)
T ss_pred             cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHH----------hcccCCCCcHHHHHHHHHHHhCCCccccch
Confidence            88888999999985            44455555555444          2222332222111  11111111 222333


Q ss_pred             HHHHHHHHHHhhhhccccccCcCCcc-------c-------cccccccCCCCchHHHHhhcCccee
Q 019481          228 NFLYLLLIATLLSTITFLSALKITGC-------K-------SEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~p~~-------~-------~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      .....      -..+++.-++-.|..       .       ...++.+||.+||||+++++|||+.
T Consensus       236 eg~~L------a~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq  295 (538)
T KOG0661|consen  236 EGYNL------ASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQ  295 (538)
T ss_pred             hHHHH------HHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccc
Confidence            32221      122233222111111       1       2256999999999999999999993

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-44  Score=324.32  Aligned_cols=237  Identities=18%  Similarity=0.191  Sum_probs=190.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc---h-hhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP---L-QLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~---~-~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      ..|+||.|+.|++..+++.||+|++++...   . ...+.+.+|+.++++++ ||||+++++++.+.       ...+++
T Consensus        26 G~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~-------~~~~iv   98 (370)
T KOG0583|consen   26 GSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATP-------TKIYIV   98 (370)
T ss_pred             cCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecC-------CeEEEE
Confidence            479999999999999999999998876311   1 34566779999999999 99999999977643       358899


Q ss_pred             eccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCC-CceEEeccccceee
Q 019481           79 KWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDET-FKCNLSDFSTAKVS  157 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~-~~~kl~DFGla~~~  157 (340)
                      |||+.||+|.+++...++     +.|..++.+++|+++|++|||+  ++|+||||||+|||+|.+ +++||+|||++...
T Consensus        99 mEy~~gGdL~~~i~~~g~-----l~E~~ar~~F~Qlisav~y~H~--~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~  171 (370)
T KOG0583|consen   99 MEYCSGGDLFDYIVNKGR-----LKEDEARKYFRQLISAVAYCHS--RGIVHRDLKPENILLDGNEGNLKLSDFGLSAIS  171 (370)
T ss_pred             EEecCCccHHHHHHHcCC-----CChHHHHHHHHHHHHHHHHHHh--CCEeeCCCCHHHEEecCCCCCEEEecccccccc
Confidence            999999999999999665     9999999999999999999999  889999999999999999 99999999999988


Q ss_pred             -cccCCcceeeccceeeccCccccch-hh--hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHH
Q 019481          158 -AVENADLTALDTSSVSAQSGKTGME-MK--MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLL  233 (340)
Q Consensus       158 -~~~~~~~~~~gt~~~~~p~~~~~~~-~~--~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (340)
                       ..+....+.|||+.|+|||.+.+.+ +.  ..|+||.|...|.+..+.  +||.+.....+...+..+.          
T Consensus       172 ~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~--~PF~d~~~~~l~~ki~~~~----------  239 (370)
T KOG0583|consen  172 PGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGR--LPFDDSNVPNLYRKIRKGE----------  239 (370)
T ss_pred             CCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCC--CCCCCccHHHHHHHHhcCC----------
Confidence             4667788999999999998777766 43  446777776666665555  5555543322222222222          


Q ss_pred             HHHHhhhhccccccCcCCccc-cc-------cccccCCCCchHHHHhhcCcceee
Q 019481          234 LIATLLSTITFLSALKITGCK-SE-------EGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       234 ~~~~~~~~~~~~~~~~~p~~~-~~-------~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                                    ..+|..+ |.       .+|..||.+|+|+++++.|||+..
T Consensus       240 --------------~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  240 --------------FKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             --------------ccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence                          3333333 33       559999999999999999999943

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=8.1e-44  Score=296.08  Aligned_cols=239  Identities=16%  Similarity=0.123  Sum_probs=182.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||+|.+++++.++..+|+|++++..  ..+..+...+|..+|+.+.||++++++++|.       |..+.|++|||.
T Consensus        54 tGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~-------d~~~lymvmeyv  126 (355)
T KOG0616|consen   54 TGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFK-------DNSNLYMVMEYV  126 (355)
T ss_pred             cCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeec-------cCCeEEEEEecc
Confidence            6999999999999999999999998632  2344567889999999999999999999776       445888999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      +||.|+.++++.++     +++..++.++.||+.||+|||+  +.|++|||||||||+|++|.+||+|||.|+.....  
T Consensus       127 ~GGElFS~Lrk~~r-----F~e~~arFYAAeivlAleylH~--~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r--  197 (355)
T KOG0616|consen  127 PGGELFSYLRKSGR-----FSEPHARFYAAEIVLALEYLHS--LDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR--  197 (355)
T ss_pred             CCccHHHHHHhcCC-----CCchhHHHHHHHHHHHHHHHHh--cCeeeccCChHHeeeccCCcEEEEeccceEEecCc--
Confidence            99999999999887     9999999999999999999999  67999999999999999999999999999987654  


Q ss_pred             cceeeccceeeccCccccchhhhh-HhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMKMA-QLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~~~-~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      ..+.||||.|+|||-..+.++--+ |.|+.|.-.|++..+-  .||.....-.+...|..++..||.+.....       
T Consensus       198 T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~--pPF~~~~~~~iY~KI~~~~v~fP~~fs~~~-------  268 (355)
T KOG0616|consen  198 TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGY--PPFYDDNPIQIYEKILEGKVKFPSYFSSDA-------  268 (355)
T ss_pred             EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCC--CCCcCCChHHHHHHHHhCcccCCcccCHHH-------
Confidence            789999999999964333332211 3333333332222222  444443333444455555555554333221       


Q ss_pred             ccccccCcCCccccccccccCCCCch-----HHHHhhcCcce
Q 019481          242 ITFLSALKITGCKSEEGYKNNSSLNP-----ICQIVNQHPFY  278 (340)
Q Consensus       242 ~~~~~~~~~p~~~~~~~l~~dP~~R~-----t~~~ll~hp~~  278 (340)
                                .++....|++|-++|.     -.+++.+|||+
T Consensus       269 ----------kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF  300 (355)
T KOG0616|consen  269 ----------KDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWF  300 (355)
T ss_pred             ----------HHHHHHHHhhhhHhhhcCcCCCccccccCccc
Confidence                      2233456888888883     35689999999

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=6.2e-43  Score=312.93  Aligned_cols=234  Identities=17%  Similarity=0.150  Sum_probs=187.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeec-cCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHEL-ITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~-~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||+||||+.+.+.+.||+|.+.+ ...++..+.+.+|++|++.++|||||.+++||++..       ..|+|.||+.
T Consensus        12 ~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~-------~~~vVte~a~   84 (808)
T KOG0597|consen   12 EGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSA-------HLWVVTEYAV   84 (808)
T ss_pred             CCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccc-------eEEEEehhhh
Confidence            68999999999999999999999997 455667888999999999999999999999998654       6779999998


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      | +|+.++.+.+.     ++|+.++.++.|+++||.|||+  ++|+|||+||.|||++..|.+|+||||+||.+..+...
T Consensus        85 g-~L~~il~~d~~-----lpEe~v~~~a~~LVsaL~yLhs--~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~v  156 (808)
T KOG0597|consen   85 G-DLFTILEQDGK-----LPEEQVRAIAYDLVSALYYLHS--NRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSV  156 (808)
T ss_pred             h-hHHHHHHhccC-----CCHHHHHHHHHHHHHHHHHHHh--cCcccccCCcceeeecCCCceeechhhhhhhcccCcee
Confidence            6 99999999888     9999999999999999999999  88999999999999999999999999999988775543


Q ss_pred             c-eeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhc
Q 019481          164 L-TALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTI  242 (340)
Q Consensus       164 ~-~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  242 (340)
                      . ...|||.||||+.+.+-.+.             ...+.  |+     +||+.+++-.|.+||-...-.     ...+.
T Consensus       157 ltsikGtPlYmAPElv~e~pyd-------------~~sDl--Ws-----lGcilYE~~~G~PPF~a~si~-----~Lv~~  211 (808)
T KOG0597|consen  157 LTSIKGTPLYMAPELVEEQPYD-------------HTSDL--WS-----LGCILYELYVGQPPFYARSIT-----QLVKS  211 (808)
T ss_pred             eeeccCcccccCHHHHcCCCcc-------------chhhH--HH-----HHHHHHHHhcCCCCchHHHHH-----HHHHH
Confidence            3 34699999999655433322             22222  55     666666666666665432222     11122


Q ss_pred             cccccCcCCccccc-------cccccCCCCchHHHHhhcCcce
Q 019481          243 TFLSALKITGCKSE-------EGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       243 ~~~~~~~~p~~~~~-------~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ....++.+|...+.       ..|++||.+|.|..+|+.|||.
T Consensus       212 I~~d~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~  254 (808)
T KOG0597|consen  212 ILKDPVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFW  254 (808)
T ss_pred             HhcCCCCCcccccHHHHHHHHHHhhcChhhcccHHHHhcChHH
Confidence            23344444444333       4599999999999999999999

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-42  Score=302.31  Aligned_cols=239  Identities=20%  Similarity=0.195  Sum_probs=190.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|..++||+|++..++++||||+++.++.....+.+.+|++.|+.++||||++++..|..+.       ..|+||.||.+
T Consensus        36 ~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~-------~LWvVmpfMa~  108 (516)
T KOG0582|consen   36 VGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDS-------ELWVVMPFMAG  108 (516)
T ss_pred             ccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecc-------eeEEeehhhcC
Confidence            35569999999999999999999998777777899999999999999999999999886443       67899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-Cc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-AD  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~~  163 (340)
                      ||+.++++....   .+++|..+..+.+++++||.|||+  +|-||||||+.||||+.+|.|||+|||.+..+.+.. ..
T Consensus       109 GS~ldIik~~~~---~Gl~E~~Ia~iLre~LkaL~YLH~--~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~  183 (516)
T KOG0582|consen  109 GSLLDIIKTYYP---DGLEEASIATILREVLKALDYLHQ--NGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQ  183 (516)
T ss_pred             CcHHHHHHHHcc---ccccHHHHHHHHHHHHHHHHHHHh--cCceecccccccEEEcCCCcEEEcCceeeeeecccCcee
Confidence            999999998766   569999999999999999999999  889999999999999999999999999887655432 21


Q ss_pred             ----ceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          164 ----LTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       164 ----~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                          .++.||+.||||      |+.+..+-  |     |....++|+     .|++.-|+..|..||..+.....+... 
T Consensus       184 ~~rf~tfvgtp~wmAP------Evl~q~~~--G-----YdfKaDIwS-----fGITA~ELA~G~aPf~k~pPmkvLl~t-  244 (516)
T KOG0582|consen  184 VTRFNTFVGTPCWMAP------EVLMQQLH--G-----YDFKADIWS-----FGITACELAHGHAPFSKYPPMKVLLLT-  244 (516)
T ss_pred             eEeeccccCcccccCh------HHhhhccc--C-----ccchhhhhh-----hhHHHHHHhcCCCCcccCChHHHHHHH-
Confidence                455788888888      55543321  2     222445577     777888888888888777665322211 


Q ss_pred             hhccccccCc------CCc-----------cccccccccCCCCchHHHHhhcCcce
Q 019481          240 STITFLSALK------ITG-----------CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       240 ~~~~~~~~~~------~p~-----------~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                          .+.+|.      ++.           .+...||++||++||||++|++|+||
T Consensus       245 ----Lqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FF  296 (516)
T KOG0582|consen  245 ----LQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFF  296 (516)
T ss_pred             ----hcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHH
Confidence                122221      111           12347899999999999999999999

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=6.2e-43  Score=302.04  Aligned_cols=245  Identities=13%  Similarity=0.071  Sum_probs=197.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeec--cCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHEL--ITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~--~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .+|.||.|.+|+....|+.||+|.+++  ..++++.-.+.+|++||+.|+||||+++|+.|+       +.+...+||||
T Consensus        62 GkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFE-------NkdKIvivMEY  134 (668)
T KOG0611|consen   62 GKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFE-------NKDKIVIVMEY  134 (668)
T ss_pred             cCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhc-------CCceEEEEEEe
Confidence            369999999999999999999999986  445667777899999999999999999999776       44477799999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      .++|+|++++..++.     ++|.+++.+++||.+|+.|||.  ++++|||||.+|||+|+|+++||+|||++..+.+..
T Consensus       135 aS~GeLYDYiSer~~-----LsErEaRhfFRQIvSAVhYCHk--nrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~k  207 (668)
T KOG0611|consen  135 ASGGELYDYISERGS-----LSEREARHFFRQIVSAVHYCHK--NRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKK  207 (668)
T ss_pred             cCCccHHHHHHHhcc-----ccHHHHHHHHHHHHHHHHHHhh--ccceecccchhheeecCCCCeeeeccchhhhhcccc
Confidence            999999999999887     9999999999999999999999  889999999999999999999999999999888877


Q ss_pred             CcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      -..++||++.|.+|+-+-|.++.            .-.++.  |+     +|.+.+.+.-|..||+......++. ++..
T Consensus       208 fLqTFCGSPLYASPEIvNG~PY~------------GPEVDs--Ws-----LGvLLYtLVyGtMPFDG~Dhk~lvr-QIs~  267 (668)
T KOG0611|consen  208 FLQTFCGSPLYASPEIVNGTPYK------------GPEVDS--WS-----LGVLLYTLVYGTMPFDGRDHKRLVR-QISR  267 (668)
T ss_pred             HHHHhcCCcccCCccccCCCCCC------------CCccch--hh-----HHHHHHHHhhcccccCCchHHHHHH-Hhhc
Confidence            78899999999998543333222            222233  66     7777777777777777765543322 3333


Q ss_pred             ccccccCcCC--ccccccccccCCCCchHHHHhhcCcceeeee
Q 019481          242 ITFLSALKIT--GCKSEEGYKNNSSLNPICQIVNQHPFYIRLV  282 (340)
Q Consensus       242 ~~~~~~~~~p--~~~~~~~l~~dP~~R~t~~~ll~hp~~~~~~  282 (340)
                      -.|.+++.+.  ..+..-+|..||++|.|.+++..|-|+...+
T Consensus       268 GaYrEP~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvNwgy  310 (668)
T KOG0611|consen  268 GAYREPETPSDASGLIRWMLMVNPERRATIEDIASHWWVNWGY  310 (668)
T ss_pred             ccccCCCCCchHHHHHHHHHhcCcccchhHHHHhhhheeeccc
Confidence            3333332222  2344456899999999999999999995433

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=4e-43  Score=288.99  Aligned_cols=246  Identities=16%  Similarity=0.218  Sum_probs=193.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC-------chhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT-------PLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCW   76 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~-------~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~   76 (340)
                      .|..++|-++.++.|++.+|+|++....       .....+...+|++||+++. ||+|+++.++|++++       +.+
T Consensus        27 rgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s-------F~F   99 (411)
T KOG0599|consen   27 RGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA-------FVF   99 (411)
T ss_pred             ccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc-------hhh
Confidence            4667889999999999999999998511       1233456778999999995 999999999887665       667


Q ss_pred             eeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481           77 KNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus        77 ~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      +|+|.|+.|.|+|++...-.     ++|+.++.+++|+.+|+.|||.  ++|+||||||+|||+|++.++||+|||.|..
T Consensus       100 lVFdl~prGELFDyLts~Vt-----lSEK~tR~iMrqlfegVeylHa--~~IVHRDLKpENILlddn~~i~isDFGFa~~  172 (411)
T KOG0599|consen  100 LVFDLMPRGELFDYLTSKVT-----LSEKETRRIMRQLFEGVEYLHA--RNIVHRDLKPENILLDDNMNIKISDFGFACQ  172 (411)
T ss_pred             hhhhhcccchHHHHhhhhee-----ecHHHHHHHHHHHHHHHHHHHH--hhhhhcccChhheeeccccceEEeccceeec
Confidence            99999999999999998766     9999999999999999999999  8899999999999999999999999999999


Q ss_pred             ecccCCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhH-HHHHHHHHH
Q 019481          157 SAVENADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETW-NNFLYLLLI  235 (340)
Q Consensus       157 ~~~~~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~  235 (340)
                      +.++.+....||||.|.||+.      +...+.- +-+-|...++.  |+     .|.+...+..|.+|| .....+++.
T Consensus       173 l~~GekLrelCGTPgYLAPEt------ikC~m~e-~~pGYs~EVD~--Wa-----~GVImyTLLaGcpPFwHRkQmlMLR  238 (411)
T KOG0599|consen  173 LEPGEKLRELCGTPGYLAPET------IKCSMYE-NHPGYSKEVDE--WA-----CGVIMYTLLAGCPPFWHRKQMLMLR  238 (411)
T ss_pred             cCCchhHHHhcCCCcccChhh------eeeeccc-CCCCccchhhH--HH-----HHHHHHHHHcCCCchhHHHHHHHHH
Confidence            999999999999999999943      3222221 44444444444  76     776666666666664 333333333


Q ss_pred             HHhhhhcccccc-----CcCCccccccccccCCCCchHHHHhhcCcce
Q 019481          236 ATLLSTITFLSA-----LKITGCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       236 ~~~~~~~~~~~~-----~~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ..+..+-.|..+     ..-++++...+|+.||++|.|+++.|.|||+
T Consensus       239 ~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff  286 (411)
T KOG0599|consen  239 MIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFF  286 (411)
T ss_pred             HHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHH
Confidence            444444444433     1223445567899999999999999999999

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-42  Score=310.70  Aligned_cols=235  Identities=19%  Similarity=0.164  Sum_probs=190.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+.|.||.|....+++.||+|.+++.. ....+.+.+|+.+|+..+|+|||++++.|-..       +..|+|||||+
T Consensus       282 gqgaSG~vy~A~~~~~~~~VaiK~m~l~~-Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~-------deLWVVMEym~  353 (550)
T KOG0578|consen  282 GQGATGGVYVARKISTKQEVAIKRMDLRK-QPKKELLLNEILVMRDLHHPNIVNFLDSYLVG-------DELWVVMEYME  353 (550)
T ss_pred             ccccccceeeeeeccCCceEEEEEEEecc-CCchhhhHHHHHHHHhccchHHHHHHHHhccc-------ceeEEEEeecC
Confidence            46889999999999999999999998643 23456688999999999999999999977532       36789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-C
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-A  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~  162 (340)
                      ||+|.+.+....      ++|.++..+++++++||+|||.  ++|+|||||.+|||++.+|.+||+|||++..+...+ .
T Consensus       354 ggsLTDvVt~~~------~~E~qIA~Icre~l~aL~fLH~--~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~K  425 (550)
T KOG0578|consen  354 GGSLTDVVTKTR------MTEGQIAAICREILQGLKFLHA--RGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSK  425 (550)
T ss_pred             CCchhhhhhccc------ccHHHHHHHHHHHHHHHHHHHh--cceeeeccccceeEeccCCcEEEeeeeeeeccccccCc
Confidence            999999998754      8999999999999999999999  889999999999999999999999999999887765 6


Q ss_pred             cceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhc
Q 019481          163 DLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTI  242 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  242 (340)
                      ..+.+|||.||||      |++.       ...|+...  +.|+     +|++..||.+|++||=......  +  +..|
T Consensus       426 R~TmVGTPYWMAP------EVvt-------rk~YG~KV--DIWS-----LGIMaIEMveGEPPYlnE~Plr--A--lyLI  481 (550)
T KOG0578|consen  426 RSTMVGTPYWMAP------EVVT-------RKPYGPKV--DIWS-----LGIMAIEMVEGEPPYLNENPLR--A--LYLI  481 (550)
T ss_pred             cccccCCCCccch------hhhh-------hcccCccc--cchh-----hhhHHHHHhcCCCCccCCChHH--H--HHHH
Confidence            6788999999999      5552       22333334  4498     9999999999999976432221  1  1111


Q ss_pred             cccccCc--CCc-------cccccccccCCCCchHHHHhhcCcce
Q 019481          243 TFLSALK--ITG-------CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       243 ~~~~~~~--~p~-------~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .-...|.  -|+       +|...||+.|+.+|++|.+||+|||+
T Consensus       482 a~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl  526 (550)
T KOG0578|consen  482 ATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFL  526 (550)
T ss_pred             hhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhh
Confidence            1122222  222       33447899999999999999999999

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=8.2e-43  Score=288.22  Aligned_cols=233  Identities=18%  Similarity=0.139  Sum_probs=177.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeec-cCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHEL-ITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~-~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||+||++.+..+++.+|.|-++- ..+.+..+.+..|+.+|++|+|||||+++++-     ..++...++++||+|.
T Consensus        29 ~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~-----f~~~~evlnivmE~c~  103 (375)
T KOG0591|consen   29 RGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHS-----FIEDNEVLNIVMELCD  103 (375)
T ss_pred             CCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHh-----hhccchhhHHHHHhhc
Confidence            58999999999999999999999873 23445677889999999999999999999832     2334445889999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhc--CCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHS--SEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~--~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      .|||.+.|+.... .++.++|.+++.++.|++.||.++|+  ..+-|+||||||.||+++.+|.+||+|||+++.+....
T Consensus       104 ~GDLsqmIk~~K~-qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~  182 (375)
T KOG0591|consen  104 AGDLSQMIKHFKK-QKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKT  182 (375)
T ss_pred             ccCHHHHHHHHHh-ccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchh
Confidence            9999999976543 23569999999999999999999999  44459999999999999999999999999999887654


Q ss_pred             C-cceeeccceeeccCccccchhhh-hHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          162 A-DLTALDTSSVSAQSGKTGMEMKM-AQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       162 ~-~~~~~gt~~~~~p~~~~~~~~~~-~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      . +.+++|||.||+|+.+.+-++.. +|+|+.|+..+++....  .||.+.+.-                       .+|
T Consensus       183 tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~--~PF~g~n~~-----------------------~L~  237 (375)
T KOG0591|consen  183 TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQ--SPFYGDNLL-----------------------SLC  237 (375)
T ss_pred             HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcC--CCcccccHH-----------------------HHH
Confidence            3 45678999999996665555442 25555555554443322  444444332                       344


Q ss_pred             hhccccccCcCC-ccccc-------cccccCCCCchH
Q 019481          240 STITFLSALKIT-GCKSE-------EGYKNNSSLNPI  268 (340)
Q Consensus       240 ~~~~~~~~~~~p-~~~~~-------~~l~~dP~~R~t  268 (340)
                      .+|.-+..|++| .-+|.       -|+..||..||+
T Consensus       238 ~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~  274 (375)
T KOG0591|consen  238 KKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPD  274 (375)
T ss_pred             HHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCC
Confidence            455555555555 22333       468899999997

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-43  Score=306.72  Aligned_cols=238  Identities=21%  Similarity=0.187  Sum_probs=200.4

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|.+..+++.||+|+++........+++++|+.+|.+++++||.++|+.|..+.       .+|++||||.|
T Consensus        23 rGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~-------~LwiiMey~~g   95 (467)
T KOG0201|consen   23 RGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGT-------KLWIIMEYCGG   95 (467)
T ss_pred             ccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecc-------cHHHHHHHhcC
Confidence            68999999999999999999999998777777888999999999999999999999886443       66799999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-Cc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-AD  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~~  163 (340)
                      |++.++++....     ++|..+.-++++++.||.|||+  ++.+|||||+.|||+..+|.+|++|||++.++.... ..
T Consensus        96 Gsv~~lL~~~~~-----~~E~~i~~ilre~l~~l~ylH~--~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr  168 (467)
T KOG0201|consen   96 GSVLDLLKSGNI-----LDEFEIAVILREVLKGLDYLHS--EKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR  168 (467)
T ss_pred             cchhhhhccCCC-----CccceeeeehHHHHHHhhhhhh--cceecccccccceeEeccCcEEEEecceeeeeechhhcc
Confidence            999999998775     6999999999999999999999  889999999999999999999999999999887654 34


Q ss_pred             ceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhcc
Q 019481          164 LTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTIT  243 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  243 (340)
                      .+++||+.|||||.+.+-++.             .  .++.|+     +|++..+|.+|.+|+....++    .....|.
T Consensus       169 ~tfvGTPfwMAPEVI~~~~Y~-------------~--KADIWS-----LGITaiEla~GePP~s~~hPm----rvlflIp  224 (467)
T KOG0201|consen  169 KTFVGTPFWMAPEVIKQSGYD-------------T--KADIWS-----LGITAIELAKGEPPHSKLHPM----RVLFLIP  224 (467)
T ss_pred             ccccccccccchhhhcccccc-------------c--hhhhhh-----hhHHHHHHhcCCCCCcccCcc----eEEEecc
Confidence            789999999999544433322             2  334466     777777777777777776664    2445566


Q ss_pred             ccccCcCCccccc-------cccccCCCCchHHHHhhcCcceee
Q 019481          244 FLSALKITGCKSE-------EGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       244 ~~~~~~~p~~~~~-------~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                      ...+|.+...+++       .||++||+.||+|.+|++|+|+.+
T Consensus       225 k~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~  268 (467)
T KOG0201|consen  225 KSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR  268 (467)
T ss_pred             CCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence            6666777666655       689999999999999999999944

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=6.7e-42  Score=280.67  Aligned_cols=248  Identities=18%  Similarity=0.139  Sum_probs=177.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchh-hHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQ-LRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|.||.||+|++..||+.||+|.++...... ......||+..|+.++|+||+.+.+.|-+.       ....+|+|||
T Consensus        11 GEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~-------~~l~lVfEfm   83 (318)
T KOG0659|consen   11 GEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHK-------SNLSLVFEFM   83 (318)
T ss_pred             cCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCC-------CceEEEEEec
Confidence            36999999999999999999999998743322 235578999999999999999999977544       3566999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      +. +|+..|++...    .++..++..|+.++++||+|||+  +.|+||||||.|+|++++|.+||+|||+|+.+.....
T Consensus        84 ~t-dLe~vIkd~~i----~l~pa~iK~y~~m~LkGl~y~H~--~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~  156 (318)
T KOG0659|consen   84 PT-DLEVVIKDKNI----ILSPADIKSYMLMTLKGLAYCHS--KWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR  156 (318)
T ss_pred             cc-cHHHHhccccc----ccCHHHHHHHHHHHHHHHHHHHh--hhhhcccCCccceEEcCCCcEEeecccchhccCCCCc
Confidence            85 99999998876    59999999999999999999999  8899999999999999999999999999998876444


Q ss_pred             cce-eeccceeeccC------------ccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccC-CchhHHH
Q 019481          163 DLT-ALDTSSVSAQS------------GKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKT-ENETWNN  228 (340)
Q Consensus       163 ~~~-~~gt~~~~~p~------------~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~  228 (340)
                      ..+ .+-|.+|.|||            |+|+-|++++|++- +.++..-.+++++       +..+...+.+ ....|++
T Consensus       157 ~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELll-r~P~fpG~sDidQ-------L~~If~~LGTP~~~~WP~  228 (318)
T KOG0659|consen  157 IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLL-RVPFFPGDSDIDQ-------LSKIFRALGTPTPDQWPE  228 (318)
T ss_pred             ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHc-cCCCCCCCchHHH-------HHHHHHHcCCCCcccCcc
Confidence            333 35677777775            45555555555543 3333222222211       1122222222 2223333


Q ss_pred             HHHHHHHHHhhhhccccccCcCCcc------------ccccccccCCCCchHHHHhhcCccee
Q 019481          229 FLYLLLIATLLSTITFLSALKITGC------------KSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~p~~------------~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ........      .++..|.++..            +-...+..||.+|.||++.++|+|+.
T Consensus       229 ~~~lpdY~------~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~  285 (318)
T KOG0659|consen  229 MTSLPDYV------KIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFK  285 (318)
T ss_pred             ccccccHH------HHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhh
Confidence            32221111      11111222221            12245999999999999999999994

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=7e-43  Score=317.93  Aligned_cols=240  Identities=15%  Similarity=0.147  Sum_probs=190.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc--CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI--TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+.|.|.+|++..||+.+|||++.+.  ........+.+|+-+|+-+.||||+++|+.|+       +..+.|++.||+
T Consensus        22 ~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe-------~~~~lylvlEyv   94 (786)
T KOG0588|consen   22 KGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWE-------NKQHLYLVLEYV   94 (786)
T ss_pred             CCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeec-------cCceEEEEEEec
Confidence            578899999999999999999999863  22334567899999999999999999999655       556889999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      +||.|++++...++     +++.+++.+++||+.|+.|||.  .+|+||||||+|+|||..+++||+|||+|..-.++.-
T Consensus        95 ~gGELFdylv~kG~-----l~e~eaa~ff~QIi~gv~yCH~--~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gkl  167 (786)
T KOG0588|consen   95 PGGELFDYLVRKGP-----LPEREAAHFFRQILDGVSYCHA--FNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKL  167 (786)
T ss_pred             CCchhHHHHHhhCC-----CCCHHHHHHHHHHHHHHHHHhh--hcceeccCCchhhhhhcccCEeeeccceeecccCCcc
Confidence            99999999999887     9999999999999999999999  7799999999999999999999999999998777777


Q ss_pred             cceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhc
Q 019481          163 DLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTI  242 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  242 (340)
                      ..+.||+|+|.+||.++|-.|.       |.+.       +.|+     .|.+...+++|..||++-.-..+ .....+-
T Consensus       168 LeTSCGSPHYA~PEIV~G~pYd-------G~~s-------DVWS-----CGVILfALLtG~LPFdDdNir~L-LlKV~~G  227 (786)
T KOG0588|consen  168 LETSCGSPHYAAPEIVSGRPYD-------GRPS-------DVWS-----CGVILFALLTGKLPFDDDNIRVL-LLKVQRG  227 (786)
T ss_pred             ccccCCCcccCCchhhcCCCCC-------CCcc-------ccch-----hHHHHHHHHhCCCCCCCccHHHH-HHHHHcC
Confidence            8899999999999555544433       2222       3366     66666666666666664222111 1122233


Q ss_pred             cccccCcCCcc---ccccccccCCCCchHHHHhhcCcce
Q 019481          243 TFLSALKITGC---KSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       243 ~~~~~~~~p~~---~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .|+.+-.++.+   +...+|..||++|.|.+++++|||+
T Consensus       228 ~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l  266 (786)
T KOG0588|consen  228 VFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFL  266 (786)
T ss_pred             cccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchh
Confidence            34444344332   2335699999999999999999999

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=7.4e-44  Score=289.10  Aligned_cols=276  Identities=13%  Similarity=0.065  Sum_probs=195.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeec-cCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHEL-ITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~-~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+|+.|+++.+..+|+.+|+|+++. .......+.+.+|++|.+.|+||||++|++++       .+..+.|+++|+|.
T Consensus        21 kG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti-------~~~~~~ylvFe~m~   93 (355)
T KOG0033|consen   21 KGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-------QEESFHYLVFDLVT   93 (355)
T ss_pred             cCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhh-------cccceeEEEEeccc
Confidence            69999999999999999999999985 23334678899999999999999999999954       45568899999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC---CCceEEeccccceeeccc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE---TFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~---~~~~kl~DFGla~~~~~~  160 (340)
                      ||+|..-|-.+.-     ++|..+..+++||++||.|+|.  ++|+|||+||+|+|+.+   ..-+||+|||+|..+..+
T Consensus        94 G~dl~~eIV~R~~-----ySEa~aSH~~rQiLeal~yCH~--n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g  166 (355)
T KOG0033|consen   94 GGELFEDIVAREF-----YSEADASHCIQQILEALAYCHS--NGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDG  166 (355)
T ss_pred             chHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHh--cCceeccCChhheeeeeccCCCceeecccceEEEeCCc
Confidence            9999887776654     8999999999999999999999  88999999999999965   345999999999999877


Q ss_pred             CCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCch-----hHHHHHHHHH
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENE-----TWNNFLYLLL  234 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~  234 (340)
                      ...-.+.|||.||+|+...--.+- ..|+|+.|+..+....+.  .||.++...-+.+.+..+..     .|+.....+ 
T Consensus       167 ~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~--~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~A-  243 (355)
T KOG0033|consen  167 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY--PPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEA-  243 (355)
T ss_pred             cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCC--CCCCCccHHHHHHHHhccccCCCCcccCcCCHHH-
Confidence            766778899999999522211111 123333333333222222  44444333333333333222     222222221 


Q ss_pred             HHHhhhhccccccCcCCccccccccccCCCCchHHHHhhcCcceeeeehhhHHHHHHHHHHHHHHHHcCCCchHHHHHHH
Q 019481          235 IATLLSTITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFYIRLVTTFNSVAFFLSIALMMILFNKLPLRPLLLVSA  314 (340)
Q Consensus       235 ~~~~~~~~~~~~~~~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~~~~~~~~~~~~f~~s~~~~~~~~~~~pl~~~~~~~~  314 (340)
                                       +++...+|..||++|.||.+.|+|||++.-..+.....    ..-..--..+|.-++.+.-++
T Consensus       244 -----------------k~LvrrML~~dP~kRIta~EAL~HpWi~~r~~~As~~H----~~dtvd~lrkfNarRKLKgav  302 (355)
T KOG0033|consen  244 -----------------KSLIRRMLTVNPKKRITADEALKHPWICNRERVASAIH----RQDTVDCLKKFNARRKLKGAI  302 (355)
T ss_pred             -----------------HHHHHHHhccChhhhccHHHHhCCchhcchHHHHHHhh----hHHHHHHHHHhhHHHHHHHHH
Confidence                             23344668899999999999999999954333322221    111111226777788877766


Q ss_pred             HHHH
Q 019481          315 FSML  318 (340)
Q Consensus       315 ~~m~  318 (340)
                      ++-+
T Consensus       303 Ltav  306 (355)
T KOG0033|consen  303 LTTV  306 (355)
T ss_pred             HHHH
Confidence            6644

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-42  Score=302.67  Aligned_cols=249  Identities=12%  Similarity=0.038  Sum_probs=182.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCch-------------hhHHHHHHHHHHhhhcCCCccccccccccccccccC
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPL-------------QLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTG   70 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~-------------~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~   70 (340)
                      .+|.||.|.+|++..+++.||+|++.+....             ...+.+.+|+.+|++|+|||||+|++.-     ...
T Consensus       106 G~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvL-----DDP  180 (576)
T KOG0585|consen  106 GSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVL-----DDP  180 (576)
T ss_pred             cCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEee-----cCc
Confidence            3799999999999999999999999862211             1135789999999999999999999943     234


Q ss_pred             CcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEec
Q 019481           71 DRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSD  150 (340)
Q Consensus        71 ~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~D  150 (340)
                      ..+++|+|+|||..|.+...=.....     +++.+++.|+++++.||+|||.  ++||||||||+|+||+++|++||+|
T Consensus       181 ~s~~~YlVley~s~G~v~w~p~d~~e-----ls~~~Ar~ylrDvv~GLEYLH~--QgiiHRDIKPsNLLl~~~g~VKIsD  253 (576)
T KOG0585|consen  181 ESDKLYLVLEYCSKGEVKWCPPDKPE-----LSEQQARKYLRDVVLGLEYLHY--QGIIHRDIKPSNLLLSSDGTVKISD  253 (576)
T ss_pred             ccCceEEEEEeccCCccccCCCCccc-----ccHHHHHHHHHHHHHHHHHHHh--cCeeccccchhheEEcCCCcEEeec
Confidence            66689999999999988654433322     9999999999999999999999  8899999999999999999999999


Q ss_pred             cccceeeccc------CCcceeeccceeeccCcccc---c--hhhhhHhHhCCccccccccccccCCCCCCcccccCCCc
Q 019481          151 FSTAKVSAVE------NADLTALDTSSVSAQSGKTG---M--EMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNL  219 (340)
Q Consensus       151 FGla~~~~~~------~~~~~~~gt~~~~~p~~~~~---~--~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l  219 (340)
                      ||.+.....+      .......|||.++||+-.++   .  --...|+|+.|++.|.+..+.  .||.+...-++...|
T Consensus       254 FGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~--~PF~~~~~~~l~~KI  331 (576)
T KOG0585|consen  254 FGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQ--LPFFDDFELELFDKI  331 (576)
T ss_pred             cceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhcc--CCcccchHHHHHHHH
Confidence            9999766222      11223579999999964433   1  111346677777766655544  555555444444444


Q ss_pred             cCCchhHHHHHHHHHHHHhhhhccccccCcCCccccccccccCCCCchHHHHhhcCcceeee
Q 019481          220 KTENETWNNFLYLLLIATLLSTITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFYIRL  281 (340)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~~~~  281 (340)
                      ......|+........               ..++...+|++||.+|.+..++..|||+.+.
T Consensus       332 vn~pL~fP~~pe~~e~---------------~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  332 VNDPLEFPENPEINED---------------LKDLIKRLLEKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             hcCcccCCCcccccHH---------------HHHHHHHHhhcChhheeehhhheecceeccC
Confidence            4333322222111000               0233446799999999999999999999655

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.8e-43  Score=282.90  Aligned_cols=240  Identities=17%  Similarity=0.124  Sum_probs=189.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      +.|-||.||.|+.++++-.||+|++.+..  ..+...++.+|++|-+.|+||||+++|+||.+.       ...|+++||
T Consensus        31 gkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~-------~riyLilEy  103 (281)
T KOG0580|consen   31 GKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDS-------KRIYLILEY  103 (281)
T ss_pred             cCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecc-------ceeEEEEEe
Confidence            35999999999999999999999997522  223457799999999999999999999998743       367799999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      .++|+|+..+.....   ..+++..+..+++|++.||.|+|.  ++||||||||+|+|++.++.+||+|||.+..-+ ..
T Consensus       104 a~~gel~k~L~~~~~---~~f~e~~~a~Yi~q~A~Al~y~h~--k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-~~  177 (281)
T KOG0580|consen  104 APRGELYKDLQEGRM---KRFDEQRAATYIKQLANALLYCHL--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-SN  177 (281)
T ss_pred             cCCchHHHHHHhccc---ccccccchhHHHHHHHHHHHHhcc--CCcccCCCCHHHhccCCCCCeeccCCCceeecC-CC
Confidence            999999999995544   459999999999999999999999  889999999999999999999999999997765 66


Q ss_pred             CcceeeccceeeccCccccchhhhh-HhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMKMA-QLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~~~-~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      ...+.|||..|.+|+-..+.+.... |+|+.|.-.+++.++.  .||.....+.+..++...+..++             
T Consensus       178 kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~--ppFes~~~~etYkrI~k~~~~~p-------------  242 (281)
T KOG0580|consen  178 KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGL--PPFESQSHSETYKRIRKVDLKFP-------------  242 (281)
T ss_pred             CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcC--CchhhhhhHHHHHHHHHccccCC-------------
Confidence            7789999999999966555554433 6666666555555544  55555554444433333222222             


Q ss_pred             hccccccCcCCc---cccccccccCCCCchHHHHhhcCcce
Q 019481          241 TITFLSALKITG---CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                             ..++.   ++...|+..+|.+|.+..+++.||||
T Consensus       243 -------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI  276 (281)
T KOG0580|consen  243 -------STISGGAADLISRLLVKNPIERLALTEVMDHPWI  276 (281)
T ss_pred             -------cccChhHHHHHHHHhccCccccccHHHHhhhHHH
Confidence                   22222   23346799999999999999999999

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=7.7e-41  Score=296.30  Aligned_cols=243  Identities=15%  Similarity=0.126  Sum_probs=183.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc-hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP-LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+|+.||+|.+..... .....-..|||.||++|+||||++|.+....     .....+|+|+|||+
T Consensus       127 eGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~-----~~~~siYlVFeYMd  201 (560)
T KOG0600|consen  127 EGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTS-----KLSGSIYLVFEYMD  201 (560)
T ss_pred             CcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEe-----cCCceEEEEEeccc
Confidence            59999999999999999999999986432 2334556799999999999999999994432     23458899999998


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC-
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA-  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~-  162 (340)
                      . ||.-++....-    .|++.++..|++|+++||+|||+  ++|+|||||.+|||||.+|.+||+|||||+.+..... 
T Consensus       202 h-DL~GLl~~p~v----kft~~qIKc~mkQLl~Gl~~cH~--~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~  274 (560)
T KOG0600|consen  202 H-DLSGLLSSPGV----KFTEPQIKCYMKQLLEGLEYCHS--RGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSA  274 (560)
T ss_pred             c-hhhhhhcCCCc----ccChHHHHHHHHHHHHHHHHHhh--cCeeeccccccceEEcCCCCEEeccccceeeccCCCCc
Confidence            6 99999987553    49999999999999999999999  8899999999999999999999999999998776543 


Q ss_pred             -cceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHH---HHHHHHHHHh
Q 019481          163 -DLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNN---FLYLLLIATL  238 (340)
Q Consensus       163 -~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~  238 (340)
                       .+..+-|.+|.+|      |.++      |.+-|..++|.  |+     .||+..||..|.+.++.   ..++..+-.+
T Consensus       275 ~~T~rVvTLWYRpP------ELLL------G~t~Yg~aVDl--WS-----~GCIl~El~~gkPI~~G~tEveQl~kIfkl  335 (560)
T KOG0600|consen  275 PYTSRVVTLWYRPP------ELLL------GATSYGTAVDL--WS-----VGCILAELFLGKPILQGRTEVEQLHKIFKL  335 (560)
T ss_pred             ccccceEEeeccCh------HHhc------CCcccccceee--hh-----hhHHHHHHHcCCCCcCCccHHHHHHHHHHH
Confidence             3344557767766      5443      55555555555  88     88888888776666543   3333333334


Q ss_pred             hhhcc--ccccCcCCc------------cc--------------cccccccCCCCchHHHHhhcCcce
Q 019481          239 LSTIT--FLSALKITG------------CK--------------SEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       239 ~~~~~--~~~~~~~p~------------~~--------------~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      |...+  +-....+|.            ++              .+..|..||++|.||.+.|+++||
T Consensus       336 cGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF  403 (560)
T KOG0600|consen  336 CGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYF  403 (560)
T ss_pred             hCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccc
Confidence            43322  111112221            11              113499999999999999999999

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=6.8e-42  Score=292.97  Aligned_cols=245  Identities=20%  Similarity=0.165  Sum_probs=179.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .+|+||.||+|+...+++.||||.+-.     +.+--.+|+++|++++|||||+|..+|.....-  |+-+..+|+||||
T Consensus        33 G~GsFg~Vyq~~~~e~~~~vAIKKv~~-----d~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~--d~~~lnlVleymP  105 (364)
T KOG0658|consen   33 GSGSFGVVYQAKLRETEEEVAIKKVLQ-----DKRYKNRELQIMRKLDHPNIVRLLYFFSSSTES--DEVYLNLVLEYMP  105 (364)
T ss_pred             eecccceEEEEEEcCCCceeEEEEecC-----CCCcCcHHHHHHHhcCCcCeeeEEEEEEecCCC--chhHHHHHHHhch
Confidence            479999999999999999999999852     222346899999999999999999999865432  4567889999998


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCC-CceEEeccccceeecccCC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDET-FKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~-~~~kl~DFGla~~~~~~~~  162 (340)
                      . +|.+.++.... .+..++...++-++.||++||.|||+  .+|+||||||+|+|+|.+ |.+||||||.|+.+..+++
T Consensus       106 ~-tL~~~~r~~~~-~~~~mp~~~iKLYt~Qlfrgl~yLh~--~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ep  181 (364)
T KOG0658|consen  106 E-TLYRVIRHYTR-ANQRMPLLEIKLYTYQLFRGLAYLHS--HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEP  181 (364)
T ss_pred             H-HHHHHHHHHhh-cCCCCceeeeHHHHHHHHHHHHHHHh--cCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCC
Confidence            6 99999996311 12348999999999999999999999  779999999999999985 9999999999999999999


Q ss_pred             cceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHH---HHHHHHHHhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNF---LYLLLIATLL  239 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~  239 (340)
                      ..++.-|+.|.|||-..            |..-|.  ..++.|+     .||+..|+..|.+-|+..   .+..++....
T Consensus       182 niSYicSRyYRaPELif------------ga~~Yt--~~IDiWS-----aGCV~aELl~g~plFpG~s~~dQL~eIik~l  242 (364)
T KOG0658|consen  182 NISYICSRYYRAPELIF------------GATEYT--TSIDIWS-----AGCVMAELLKGQPLFPGDSSVDQLVEIIKVL  242 (364)
T ss_pred             ceeEEEeccccCHHHHc------------CccccC--ceeEEhh-----hhHHHHHHhcCCcccCCCCHHHHHHHHHHHh
Confidence            99998899888885332            222222  2333365     666666665555555432   1221111111


Q ss_pred             hhcccc------------ccCcC---C----------c---cccccccccCCCCchHHHHhhcCcce
Q 019481          240 STITFL------------SALKI---T----------G---CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       240 ~~~~~~------------~~~~~---p----------~---~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ..-+..            ..|.+   +          .   ++-..+|+++|++|.++.+++.|||+
T Consensus       243 G~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fF  309 (364)
T KOG0658|consen  243 GTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFF  309 (364)
T ss_pred             CCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhh
Confidence            111000            00111   1          0   01224599999999999999999999

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.2e-41  Score=285.82  Aligned_cols=246  Identities=16%  Similarity=0.128  Sum_probs=177.4

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeec-cCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHEL-ITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~-~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.|+.|.++.+++.||+|.+.. .......++..||+.+|+.++|+||+.+.+.+...  ...+-+.+|+|+|+|
T Consensus        31 G~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~--~~~~f~DvYiV~elM  108 (359)
T KOG0660|consen   31 GRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPP--SRDKFNDVYLVFELM  108 (359)
T ss_pred             cCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccc--cccccceeEEehhHH
Confidence            369999999999999999999999874 34455668889999999999999999999988652  223455789999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc--
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE--  160 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~--  160 (340)
                      + .+|.+.++.+..     +++..+..++.||+.||+|+|+++  |+||||||+|+|++.+..+||+|||+||.....  
T Consensus       109 e-tDL~~iik~~~~-----L~d~H~q~f~YQiLrgLKyiHSAn--ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~  180 (359)
T KOG0660|consen  109 E-TDLHQIIKSQQD-----LTDDHAQYFLYQILRGLKYIHSAN--VIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFE  180 (359)
T ss_pred             h-hHHHHHHHcCcc-----ccHHHHHHHHHHHHHhcchhhccc--ccccccchhheeeccCCCEEeccccceeeccccCc
Confidence            5 599999999876     999999999999999999999955  999999999999999999999999999988643  


Q ss_pred             -CCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHH---HHHHH
Q 019481          161 -NADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLY---LLLIA  236 (340)
Q Consensus       161 -~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~  236 (340)
                       ...+.      |.++..|.+||+.+.        ...+...++.|+     .||+..+|.++.+-|+....   +-.+.
T Consensus       181 ~~~mTe------YVaTRWYRAPElll~--------~~~Yt~aiDiWS-----vGCI~AEmL~gkplFpG~d~v~Ql~lI~  241 (359)
T KOG0660|consen  181 DGFMTE------YVATRWYRAPELLLN--------SSEYTKAIDIWS-----VGCILAEMLTGKPLFPGKDYVHQLQLIL  241 (359)
T ss_pred             ccchhc------ceeeeeecCHHHHhc--------cccccchhhhhh-----hhHHHHHHHcCCCCCCCCchHHHHHHHH
Confidence             21223      444444444454421        222333344466     66666666665555544221   11111


Q ss_pred             Hhhhh--------cc--------ccccCcCCccc--------------cccccccCCCCchHHHHhhcCcce
Q 019481          237 TLLST--------IT--------FLSALKITGCK--------------SEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       237 ~~~~~--------~~--------~~~~~~~p~~~--------------~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ..+..        +.        .+.+..++..+              .+.+|..||.+|+||++.|.|||+
T Consensus       242 ~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl  313 (359)
T KOG0660|consen  242 ELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYL  313 (359)
T ss_pred             HhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhh
Confidence            11111        00        00111111111              234599999999999999999999

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=2.3e-41  Score=301.92  Aligned_cols=139  Identities=17%  Similarity=0.145  Sum_probs=126.9

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc--CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI--TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      +.||||.||+|+-+.||+.+|+|++++.  ......+.++.|-++|...++|.||+||.+|+       |..++|++|||
T Consensus       150 gkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQ-------D~~~LYLiMEy  222 (550)
T KOG0605|consen  150 GKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQ-------DKEYLYLIMEY  222 (550)
T ss_pred             ccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEec-------CCCeeEEEEEe
Confidence            5799999999999999999999999862  12234567889999999999999999999886       55689999999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      ++|||+..+|...+.     |++..++.|+.+++.|+.-||+  .|+|||||||+|+|||..|++||+|||||..
T Consensus       223 lPGGD~mTLL~~~~~-----L~e~~arfYiaE~vlAI~~iH~--~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~g  290 (550)
T KOG0605|consen  223 LPGGDMMTLLMRKDT-----LTEDWARFYIAETVLAIESIHQ--LGYIHRDIKPDNLLIDAKGHIKLSDFGLSTG  290 (550)
T ss_pred             cCCccHHHHHHhcCc-----CchHHHHHHHHHHHHHHHHHHH--cCcccccCChhheeecCCCCEeeccccccch
Confidence            999999999999887     9999999999999999999999  8899999999999999999999999999853

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-40  Score=300.52  Aligned_cols=241  Identities=17%  Similarity=0.109  Sum_probs=185.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCch--hhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPL--QLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|.||.||+|+.+.||+.+|+|++++....  ...+.+.+|+++|++++ |||||+++++|++       ....+++||+
T Consensus        45 ~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~-------~~~~~lvmEL  117 (382)
T KOG0032|consen   45 RGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFED-------PDSVYLVMEL  117 (382)
T ss_pred             CCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEc-------CCeEEEEEEe
Confidence            699999999999999999999999874332  24578999999999999 9999999997764       4478899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCC----CceEEeccccceee
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDET----FKCNLSDFSTAKVS  157 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~----~~~kl~DFGla~~~  157 (340)
                      |.||+|++.+... .     ++|..+..+++|++.|++|||+  .+|+||||||+|+|+...    +.+|++|||+|...
T Consensus       118 ~~GGeLfd~i~~~-~-----~sE~da~~~~~~il~av~~lH~--~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~  189 (382)
T KOG0032|consen  118 CEGGELFDRIVKK-H-----YSERDAAGIIRQILEAVKYLHS--LGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFI  189 (382)
T ss_pred             cCCchHHHHHHHc-c-----CCHHHHHHHHHHHHHHHHHHHh--CCceeccCCHHHeeeccccCCCCcEEEeeCCCceEc
Confidence            9999999999987 3     8999999999999999999999  779999999999999653    57999999999998


Q ss_pred             cccCCcceeeccceeeccCccccchhhh-hHhHhCCccccccccccccCCCCCCcccccCCCccCC-----chhHHHHHH
Q 019481          158 AVENADLTALDTSSVSAQSGKTGMEMKM-AQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTE-----NETWNNFLY  231 (340)
Q Consensus       158 ~~~~~~~~~~gt~~~~~p~~~~~~~~~~-~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~  231 (340)
                      ..+....+.+||+.|+||+...+-++.. .|+|+.|...|.+..+.  .||..........++..+     .++|+....
T Consensus       190 ~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~--~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~  267 (382)
T KOG0032|consen  190 KPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGV--PPFWGETEFEIFLAILRGDFDFTSEPWDDISE  267 (382)
T ss_pred             cCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCC--CCCcCCChhHHHHHHHcCCCCCCCCCccccCH
Confidence            8866778889999999997555333332 25666555555543333  455444432222222221     222222222


Q ss_pred             HHHHHHhhhhccccccCcCCccccccccccCCCCchHHHHhhcCcceee
Q 019481          232 LLLIATLLSTITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                      .+                  +++...++..||.+|+||.++|+|||+..
T Consensus       268 ~a------------------kd~i~~ll~~dp~~R~ta~~~L~HpWi~~  298 (382)
T KOG0032|consen  268 SA------------------KDFIRKLLEFDPRKRLTAAQALQHPWIKS  298 (382)
T ss_pred             HH------------------HHHHHHhcccCcccCCCHHHHhcCccccC
Confidence            21                  23344679999999999999999999943

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.1e-39  Score=275.51  Aligned_cols=161  Identities=16%  Similarity=0.128  Sum_probs=135.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhH-HHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLR-RDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~-~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|+++.|++.||+|.++........ -.-+|||.+|.+++|||||.+.+..     +-.+.+.+|+|||||
T Consensus        85 ~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVV-----vG~~~d~iy~VMe~~  159 (419)
T KOG0663|consen   85 EEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVV-----VGSNMDKIYIVMEYV  159 (419)
T ss_pred             ccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEE-----eccccceeeeeHHHH
Confidence            5799999999999999999999999864433322 2358999999999999999999844     334556799999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      +. ||..++...+.    ++...+++.++.|+++|++|||+  +.|+||||||+|+|++..|.+||+|||+||.+.....
T Consensus       160 Eh-DLksl~d~m~q----~F~~~evK~L~~QlL~glk~lH~--~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k  232 (419)
T KOG0663|consen  160 EH-DLKSLMETMKQ----PFLPGEVKTLMLQLLRGLKHLHD--NWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLK  232 (419)
T ss_pred             Hh-hHHHHHHhccC----CCchHHHHHHHHHHHHHHHHHhh--ceeEecccchhheeeccCCcEEecccchhhhhcCCcc
Confidence            86 99999998774    49999999999999999999999  8899999999999999999999999999999877533


Q ss_pred             c-ceeeccceeeccC
Q 019481          163 D-LTALDTSSVSAQS  176 (340)
Q Consensus       163 ~-~~~~gt~~~~~p~  176 (340)
                      . +..+-|.+|.||+
T Consensus       233 ~~T~lVVTLWYRaPE  247 (419)
T KOG0663|consen  233 PYTPLVVTLWYRAPE  247 (419)
T ss_pred             cCcceEEEeeecCHH
Confidence            3 2334566666664

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-40  Score=303.05  Aligned_cols=240  Identities=16%  Similarity=0.128  Sum_probs=184.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.|+++..+.+++.+|||++++..  ...+.+....|.+|+.... ||.+++|+..|++..       +++.||||
T Consensus       378 kGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~-------~l~fvmey  450 (694)
T KOG0694|consen  378 RGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE-------HLFFVMEY  450 (694)
T ss_pred             cCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC-------eEEEEEEe
Confidence            6999999999999999999999999732  3345677888999888775 999999999988654       77799999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec-cc
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA-VE  160 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~-~~  160 (340)
                      +.||++..+.+. ..     +++..++.|+.+|+.||+|||+  ++|||||||.+|||||.+|++||+|||+++... .+
T Consensus       451 ~~Ggdm~~~~~~-~~-----F~e~rarfyaAev~l~L~fLH~--~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g  522 (694)
T KOG0694|consen  451 VAGGDLMHHIHT-DV-----FSEPRARFYAAEVVLGLQFLHE--NGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQG  522 (694)
T ss_pred             cCCCcEEEEEec-cc-----ccHHHHHHHHHHHHHHHHHHHh--cCceeeecchhheEEcccCcEEecccccccccCCCC
Confidence            999995544443 33     9999999999999999999999  889999999999999999999999999999755 67


Q ss_pred             CCcceeeccceeeccCccccchhhhh-HhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMKMA-QLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~~~-~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      ..+.|+||||.|+||+...+..|-.+ |.|+.|+-.|++..+.  .||.+....++...|...++.||..........+ 
T Consensus       523 ~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq--~PF~gddEee~FdsI~~d~~~yP~~ls~ea~~il-  599 (694)
T KOG0694|consen  523 DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGE--SPFPGDDEEEVFDSIVNDEVRYPRFLSKEAIAIM-  599 (694)
T ss_pred             CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCC--CCCCCCCHHHHHHHHhcCCCCCCCcccHHHHHHH-
Confidence            78899999999999963333333322 3333333333332233  6666666666666666666666554333222211 


Q ss_pred             hhccccccCcCCccccccccccCCCCchHH-----HHhhcCcce
Q 019481          240 STITFLSALKITGCKSEEGYKNNSSLNPIC-----QIVNQHPFY  278 (340)
Q Consensus       240 ~~~~~~~~~~~p~~~~~~~l~~dP~~R~t~-----~~ll~hp~~  278 (340)
                                      +..|.+||++|.-+     +++..|||+
T Consensus       600 ----------------~~ll~k~p~kRLG~~e~d~~~i~~hpFF  627 (694)
T KOG0694|consen  600 ----------------RRLLRKNPEKRLGSGERDAEDIKKHPFF  627 (694)
T ss_pred             ----------------HHHhccCcccccCCCCCCchhhhhCCcc
Confidence                            25588999999875     699999999

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-40  Score=300.87  Aligned_cols=241  Identities=18%  Similarity=0.149  Sum_probs=201.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|+.+.++...|.|+|.. .+....+++.-||+||..|+||+||+|++.|+..+       .+|+..|||.|
T Consensus        42 DGAFGKVyKA~nket~~lAAaKvIet-kseEELEDylVEIeILa~CdHP~ivkLl~ayy~en-------kLwiliEFC~G  113 (1187)
T KOG0579|consen   42 DGAFGKVYKAVNKETKLLAAAKVIET-KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFEN-------KLWILIEFCGG  113 (1187)
T ss_pred             Cccchhhhhhhcccchhhhhhhhhcc-cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC-------ceEEEEeecCC
Confidence            69999999999999999999999974 34567788999999999999999999999887543       56788999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc-cCCc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-ENAD  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-~~~~  163 (340)
                      |-...++-.-+.    ++++.++..+++|++.||.|||+  ++|||||||..|||++.+|.++|+|||.+..... -+..
T Consensus       114 GAVDaimlEL~r----~LtE~QIqvvc~q~ldALn~LHs--~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkR  187 (1187)
T KOG0579|consen  114 GAVDAIMLELGR----VLTEDQIQVVCYQVLDALNWLHS--QNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKR  187 (1187)
T ss_pred             chHhHHHHHhcc----ccchHHHHHHHHHHHHHHHHHhh--cchhhhhccccceEEEecCcEeeecccccccchhHHhhh
Confidence            999999988776    59999999999999999999999  8899999999999999999999999998865433 4566


Q ss_pred             ceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhcc
Q 019481          164 LTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTIT  243 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  243 (340)
                      .+++|||.||||      |+.+.+.+  .-.+|++..++  |+     +|++..+|..+.+|..+...+-+    +.+|.
T Consensus       188 DsFIGTPYWMAP------EVvmCET~--KD~PYDykaDi--WS-----lGITLIEMAqiEPPHhelnpMRV----llKia  248 (1187)
T KOG0579|consen  188 DSFIGTPYWMAP------EVVMCETF--KDQPYDYKADI--WS-----LGITLIEMAQIEPPHHELNPMRV----LLKIA  248 (1187)
T ss_pred             ccccCCcccccc------hheeeccc--cCCCchhhhhH--Hh-----hhhHHHHHhccCCCccccchHHH----HHHHh
Confidence            789999999999      66666544  45567776666  88     99999999999999888777632    33444


Q ss_pred             ccccCcC--Cccc-------cccccccCCCCchHHHHhhcCcce
Q 019481          244 FLSALKI--TGCK-------SEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       244 ~~~~~~~--p~~~-------~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ...+|.+  |..+       ...||.+||..||++.+|++|||+
T Consensus       249 KSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv  292 (1187)
T KOG0579|consen  249 KSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFV  292 (1187)
T ss_pred             hcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCccc
Confidence            5555444  2223       337899999999999999999999

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=3.1e-39  Score=276.76  Aligned_cols=252  Identities=15%  Similarity=0.112  Sum_probs=179.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc-hhhHHHHHHHHHHhhhcCCCc-cccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP-LQLRRDDDGKLDSLEEIFHPN-QVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpn-Iv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||+||+|+.+.+|+.||+|.+..... +.......+|+.+|++++|+| ||+|++++.+... .......++++||
T Consensus        20 GeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~-~~~~~~l~lvfe~   98 (323)
T KOG0594|consen   20 GEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNN-HRGIGKLYLVFEF   98 (323)
T ss_pred             CCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccc-ccccceEEEEEEe
Confidence            369999999999999999999999987443 233455789999999999999 9999998765543 3344478899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-  160 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-  160 (340)
                      +.. +|.+++....... ..++...++.+++||+.||+|||+  ++|+||||||+|||++++|.+||+|||+|+..... 
T Consensus        99 ~d~-DL~~ymd~~~~~~-~g~~~~~ik~~m~Qll~gl~~~H~--~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~  174 (323)
T KOG0594|consen   99 LDR-DLKKYMDSLPKKP-QGLPPRLIKSFMRQLLRGLAFLHS--HGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPM  174 (323)
T ss_pred             ecc-cHHHHHHhccccc-cCCCHHHHHHHHHHHHHHHHHHHh--CCeecccCCcceEEECCCCcEeeeccchHHHhcCCc
Confidence            975 9999999877310 248889999999999999999999  88999999999999999999999999999977633 


Q ss_pred             CCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHH---HHHH
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLL---LIAT  237 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~  237 (340)
                      ....+..+|..|.||+...            |...|.-.++.  |+     .||+..+|.+..+-|+......   .+-.
T Consensus       175 ~~yt~evvTlWYRaPEvLl------------Gs~~Ys~~vDi--Ws-----~GcIfaEm~~~~~LFpG~se~~ql~~If~  235 (323)
T KOG0594|consen  175 RTYTPEVVTLWYRAPEVLL------------GSTSYSTSVDI--WS-----LGCIFAEMFTRRPLFPGDSEIDQLFRIFR  235 (323)
T ss_pred             ccccccEEEeeccCHHHhc------------CCCcCCCCcch--Hh-----HHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            3355667888887774322            33332222222  55     6666665555444444322211   1111


Q ss_pred             hhhhc---c---------cccc-CcC--Cccc--------------cccccccCCCCchHHHHhhcCccee
Q 019481          238 LLSTI---T---------FLSA-LKI--TGCK--------------SEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       238 ~~~~~---~---------~~~~-~~~--p~~~--------------~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ....-   .         +... +..  |..+              -.++|+.||.+|.||+..+.|||+.
T Consensus       236 ~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~  306 (323)
T KOG0594|consen  236 LLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFS  306 (323)
T ss_pred             HcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhc
Confidence            11110   0         0000 000  1111              1145999999999999999999993

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=2.2e-39  Score=291.67  Aligned_cols=235  Identities=14%  Similarity=0.080  Sum_probs=177.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|++++..  .......+.+|++++++++||||++++++|.       +..+.+++|||+
T Consensus         5 ~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-------~~~~~~lv~e~~   77 (323)
T cd05571           5 KGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQ-------THDRLCFVMEYA   77 (323)
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEE-------cCCEEEEEEeCC
Confidence            5899999999999999999999997522  2234456788999999999999999999665       344778999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc-cC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-EN  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-~~  161 (340)
                      ++|+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.... ..
T Consensus        78 ~~~~L~~~l~~~~~-----~~~~~~~~~~~qi~~~L~~lH~--~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~  150 (323)
T cd05571          78 NGGELFFHLSRERV-----FSEDRARFYGAEIVSALGYLHS--CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGA  150 (323)
T ss_pred             CCCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCC
Confidence            99999999987665     9999999999999999999999  7899999999999999999999999999976432 33


Q ss_pred             CcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      .....+||+.|+||+.+.+.++               ....+.|+     +|++..++.+|..||............   
T Consensus       151 ~~~~~~gt~~y~aPE~~~~~~~---------------~~~~DiwS-----lG~il~elltg~~Pf~~~~~~~~~~~~---  207 (323)
T cd05571         151 TMKTFCGTPEYLAPEVLEDNDY---------------GRAVDWWG-----LGVVMYEMMCGRLPFYNQDHEKLFELI---  207 (323)
T ss_pred             cccceecCccccChhhhcCCCC---------------CccccCcc-----cchhhhhhhcCCCCCCCCCHHHHHHHH---
Confidence            3445678888888854432211               11234466     666666666666665432211111100   


Q ss_pred             ccccccCcCCcc-------ccccccccCCCCch-----HHHHhhcCcce
Q 019481          242 ITFLSALKITGC-------KSEEGYKNNSSLNP-----ICQIVNQHPFY  278 (340)
Q Consensus       242 ~~~~~~~~~p~~-------~~~~~l~~dP~~R~-----t~~~ll~hp~~  278 (340)
                        ....+.+|..       +...||++||++||     +++++++|||+
T Consensus       208 --~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f  254 (323)
T cd05571         208 --LMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFF  254 (323)
T ss_pred             --HcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCc
Confidence              0111222332       23467999999999     89999999999

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-39  Score=288.94  Aligned_cols=235  Identities=18%  Similarity=0.145  Sum_probs=173.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcc-eeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRR-YCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~-~~~~~~e~~   82 (340)
                      .|+||+||+|....+ ..||+|++... ......+.+.+|+.+|++++|||||+++|+..       +.. .+.+||||+
T Consensus        51 ~G~~g~V~~~~~~g~-~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~-------~~~~~~~iVtEy~  122 (362)
T KOG0192|consen   51 SGSFGTVYKGKWRGT-DVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACT-------SPPGSLCIVTEYM  122 (362)
T ss_pred             cCCceeEEEEEeCCc-eeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEc-------CCCCceEEEEEeC
Confidence            699999999998643 23999999852 22233678999999999999999999999443       222 567999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCc-eecCCCCCCcEEecCCC-ceEEeccccceeeccc
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQ-VIYRDFKAPNILLDETF-KCNLSDFSTAKVSAVE  160 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~-iiHrDlKp~NILl~~~~-~~kl~DFGla~~~~~~  160 (340)
                      ++|+|.++++....   ..+++..+..++.||+.|+.|||+  ++ ||||||||+|||++.++ ++||+|||+++.....
T Consensus       123 ~~GsL~~~l~~~~~---~~l~~~~~l~~aldiArGm~YLH~--~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~  197 (362)
T KOG0192|consen  123 PGGSLSVLLHKKRK---RKLPLKVRLRIALDIARGMEYLHS--EGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS  197 (362)
T ss_pred             CCCcHHHHHhhccc---CCCCHHHHHHHHHHHHHHHHHHhc--CCCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence            99999999988411   349999999999999999999999  77 99999999999999998 9999999999987654


Q ss_pred             -CCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          161 -NADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       161 -~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                       .......||..|||||.+..      +     ...++.  ..+.|+     .|++..++.++..||..........   
T Consensus       198 ~~~~~~~~GT~~wMAPEv~~~------~-----~~~~~~--K~DvyS-----FgIvlWEl~t~~~Pf~~~~~~~~~~---  256 (362)
T KOG0192|consen  198 KTSMTSVAGTYRWMAPEVLRG------E-----KSPYTE--KSDVYS-----FGIVLWELLTGEIPFEDLAPVQVAS---  256 (362)
T ss_pred             cccccCCCCCccccChhhhcC------C-----CCcCCc--cchhhh-----HHHHHHHHHHCCCCCCCCCHHHHHH---
Confidence             33334688999999844431      1     112222  222355     5666677777777777655532111   


Q ss_pred             hhccccccCcCCccc-------cccccccCCCCchHHHHhh
Q 019481          240 STITFLSALKITGCK-------SEEGYKNNSSLNPICQIVN  273 (340)
Q Consensus       240 ~~~~~~~~~~~p~~~-------~~~~l~~dP~~R~t~~~ll  273 (340)
                      ..+.....|.+|.+.       .+.|+..||..||+..++.
T Consensus       257 ~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~  297 (362)
T KOG0192|consen  257 AVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIV  297 (362)
T ss_pred             HHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHH
Confidence            112233445555533       3368999999999987664

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.7e-39  Score=288.62  Aligned_cols=240  Identities=18%  Similarity=0.172  Sum_probs=187.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.++.++++..++.+++|.++... .....+...+|+.++++++|||||.+.+.|+.+      ..+.+++|+||
T Consensus        13 G~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~------~~~l~Ivm~Y~   86 (426)
T KOG0589|consen   13 GRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEED------GQLLCIVMEYC   86 (426)
T ss_pred             CccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcC------CceEEEEEeec
Confidence            46999999999999999999999998733 334455788999999999999999999988644      33678999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-  161 (340)
                      +||+|.+.|..+..   ..++|+.+..|+.|++.|++|||+  ++|+|||||+.||+++.++.|||+|||+|+.+.... 
T Consensus        87 eGg~l~~~i~~~k~---~~f~E~~i~~~~~Q~~~av~ylH~--~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~  161 (426)
T KOG0589|consen   87 EGGDLAQLIKEQKG---VLFPEERILKWFVQILLAVNYLHE--NRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDS  161 (426)
T ss_pred             CCCCHHHHHHHHhh---ccccHHHHHHHHHHHHHHHHHHHh--hhhhcccchhhhhhccccCceeecchhhhhhcCCchh
Confidence            99999999998874   569999999999999999999999  899999999999999999999999999999998876 


Q ss_pred             CcceeeccceeeccCccccchhhh-hHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMKM-AQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~~-~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      .+.+..||+.|+.|+-..+.++-. .|+|+                     +||...++.+-.++|......    .++.
T Consensus       162 ~a~tvvGTp~YmcPEil~d~pYn~KSDiWs---------------------LGC~~yEm~~lk~aF~a~~m~----~Li~  216 (426)
T KOG0589|consen  162 LASTVVGTPYYMCPEILSDIPYNEKSDIWS---------------------LGCCLYEMCTLKPAFKASNMS----ELIL  216 (426)
T ss_pred             hhheecCCCcccCHHHhCCCCCCccCcchh---------------------hcchHHHHHhcccccCccchH----HHHH
Confidence            778889999999985433333221 14444                     444444444444444433322    1222


Q ss_pred             hccccccCcCCccccc-------cccccCCCCchHHHHhhcCccee
Q 019481          241 TITFLSALKITGCKSE-------EGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       241 ~~~~~~~~~~p~~~~~-------~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ++.-..-..+|..++.       .+++.+|..||+|.+||.+|.+.
T Consensus       217 ki~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~  262 (426)
T KOG0589|consen  217 KINRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLL  262 (426)
T ss_pred             HHhhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhh
Confidence            2222223444444433       56999999999999999999883

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-39  Score=271.59  Aligned_cols=281  Identities=14%  Similarity=0.050  Sum_probs=204.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|-.|.|-.|.++.|++.+|+|++.      +.....+|+++.-.. .|||||++++.|+..   +.+...+.+|||.|+
T Consensus        72 ~GinGkV~~C~~k~T~ekfALKvL~------Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs---~~~rkcLLiVmE~me  142 (400)
T KOG0604|consen   72 AGINGKVVQCVHKRTQEKFALKVLL------DSPKARREVELHWMASGHPHIVSIIDVYENS---YQGRKCLLIVMECME  142 (400)
T ss_pred             cccCCceEEEEeccchhhhHHHHHh------cCHHHHhHhhhhhhhcCCCceEEeehhhhhh---ccCceeeEeeeeccc
Confidence            4778999999999999999999984      233457889886666 499999999999753   556667889999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC---CCceEEeccccceeeccc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE---TFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~---~~~~kl~DFGla~~~~~~  160 (340)
                      ||+|++.+++++.   ..++|.++.+|++||+.|++|||+  .+|.||||||+|+|...   |..+||+|||+|+.-...
T Consensus       143 GGeLfsriq~~g~---~afTErea~eI~~qI~~Av~~lH~--~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~  217 (400)
T KOG0604|consen  143 GGELFSRIQDRGD---QAFTEREASEIMKQIGLAVRYLHS--MNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEP  217 (400)
T ss_pred             chHHHHHHHHccc---ccchHHHHHHHHHHHHHHHHHHHh--cchhhccCChhheeeecCCCCcceEecccccccccCCC
Confidence            9999999999887   689999999999999999999999  77999999999999965   567999999999987766


Q ss_pred             CCcceeeccceeeccC-----------ccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHH
Q 019481          161 NADLTALDTSSVSAQS-----------GKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNF  229 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~-----------~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (340)
                      ....+-|-||.|.||+           +.|+++++|+-+++ |++++.-..+.-.       ...+...|.+|...|+..
T Consensus       218 ~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLC-GyPPFYS~hg~ai-------spgMk~rI~~gqy~FP~p  289 (400)
T KOG0604|consen  218 GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC-GYPPFYSNHGLAI-------SPGMKRRIRTGQYEFPEP  289 (400)
T ss_pred             ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhc-CCCcccccCCccC-------ChhHHhHhhccCccCCCh
Confidence            6677888999999994           67788888888887 4443221111111       113445555666555543


Q ss_pred             HHHHHHHHhhhhccccccCcCCccccccccccCCCCchHHHHhhcCcceeeeehhhHHHHHHHHHHHHHHHHcCCCchHH
Q 019481          230 LYLLLIATLLSTITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFYIRLVTTFNSVAFFLSIALMMILFNKLPLRPL  309 (340)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~~~~~~~~~~~~f~~s~~~~~~~~~~~pl~~~  309 (340)
                      .+.-+....             +++.+..|+.||++|.|.+++++|||+.......+.. .+++..+.-....=--...+
T Consensus       290 EWs~VSe~a-------------KdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~tp-l~t~~~l~~a~e~w~dvqee  355 (400)
T KOG0604|consen  290 EWSCVSEAA-------------KDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVPQTP-LSTSRMLKEAVEAWDDVQEE  355 (400)
T ss_pred             hHhHHHHHH-------------HHHHHHHhcCCchhheeHHHhhcCchhcccccCCCCC-chhhhhcchhhhhhHHHHHH
Confidence            333222222             4455677999999999999999999995544444332 23333332222221124444


Q ss_pred             HHHHHHHHHhhh
Q 019481          310 LLVSAFSMLGAY  321 (340)
Q Consensus       310 ~~~~~~~m~~~~  321 (340)
                      ..-.+-+|...|
T Consensus       356 m~~~lA~mrv~~  367 (400)
T KOG0604|consen  356 MTETLATMRVDP  367 (400)
T ss_pred             HHHHHHhcccCc
Confidence            555555555443

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.2e-38  Score=283.79  Aligned_cols=237  Identities=24%  Similarity=0.282  Sum_probs=176.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|...++ +.||||.++.....+ .++|.+|++++.+++|||+|+|+||+...     ++ ...+|.|||++
T Consensus        85 ~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~-----~~-~~~LVYEym~n  156 (361)
T KOG1187|consen   85 EGGFGTVYKGVLSDG-TVVAVKRLSSNSGQG-EREFLNEVEILSRLRHPNLVKLLGYCLEG-----GE-HRLLVYEYMPN  156 (361)
T ss_pred             cCCCeEEEEEEECCC-CEEEEEEecCCCCcc-hhHHHHHHHHHhcCCCcCcccEEEEEecC-----Cc-eEEEEEEccCC
Confidence            578999999998765 789999886533322 55699999999999999999999976532     11 36699999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhc-CCCceecCCCCCCcEEecCCCceEEeccccceeecc-cCC
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHS-SEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-ENA  162 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-~~~  162 (340)
                      |||.++++....   ..++|..+..|+.++|+||+|||. +..+|+||||||+|||||+++++||+|||+|+.... ...
T Consensus       157 GsL~d~L~~~~~---~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~  233 (361)
T KOG1187|consen  157 GSLEDHLHGKKG---EPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTS  233 (361)
T ss_pred             CCHHHHhCCCCC---CCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccc
Confidence            999999998764   159999999999999999999999 666899999999999999999999999999977665 443


Q ss_pred             ccee-eccceeeccC-----------ccccchhhhhHhHhCCccccccc-----cccccCC--C--CCCcccccCCCccC
Q 019481          163 DLTA-LDTSSVSAQS-----------GKTGMEMKMAQLESGGWRAHDEA-----EKAFQWP--Y--KSSHLKNTRPNLKT  221 (340)
Q Consensus       163 ~~~~-~gt~~~~~p~-----------~~~~~~~~~~~~~s~g~~~~~~~-----~~~~~~~--~--~~~~~~~~~~~l~~  221 (340)
                      ..+. .||..|++|+           |++|+|+++.++.++. .+.+..     .....|.  .  ......++++.+..
T Consensus       234 ~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr-~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~  312 (361)
T KOG1187|consen  234 VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGR-KAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKE  312 (361)
T ss_pred             eeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCC-cccCCCCCcccccHHHHHHHHHHCcchhheeCCCccC
Confidence            3444 8999999994           7789999999999854 333321     1112232  1  11233355555553


Q ss_pred             Cchh-HHHHHHHHHHHHhhhhccccccCcCCccccccccccCCCCchHHHHh
Q 019481          222 ENET-WNNFLYLLLIATLLSTITFLSALKITGCKSEEGYKNNSSLNPICQIV  272 (340)
Q Consensus       222 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~dP~~R~t~~~l  272 (340)
                      +..+ .......+..+                   ..|++.+|..||+..++
T Consensus       313 ~~~~~~~~~~~~~~~a-------------------~~C~~~~~~~RP~m~~V  345 (361)
T KOG1187|consen  313 GEYPDEKEVKKLAELA-------------------LRCLRPDPKERPTMSQV  345 (361)
T ss_pred             CCCChHHHHHHHHHHH-------------------HHHcCcCCCcCcCHHHH
Confidence            2222 12222222222                   26788999999998775

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5e-39  Score=288.01  Aligned_cols=237  Identities=17%  Similarity=0.097  Sum_probs=173.6

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc--CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI--TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|++..+++.||+|+++..  ........+.+|++++++++||||++++++|.       +....+++|||
T Consensus         2 g~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------~~~~~~lv~e~   74 (312)
T cd05585           2 GKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQ-------SPEKLYLVLAF   74 (312)
T ss_pred             CcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEe-------cCCeEEEEEcC
Confidence            3689999999999999999999999752  22334566789999999999999999999664       34478899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc-c
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-E  160 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-~  160 (340)
                      +++|+|.+++.....     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.... .
T Consensus        75 ~~~g~L~~~l~~~~~-----~~~~~~~~~~~qi~~~l~~lH~--~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~  147 (312)
T cd05585          75 INGGELFHHLQREGR-----FDLSRARFYTAELLCALENLHK--FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD  147 (312)
T ss_pred             CCCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC
Confidence            999999999987665     9999999999999999999999  8899999999999999999999999999986433 2


Q ss_pred             CCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      ......+||+.|+||+.+.+.++.               ...+.|+     .|++..++.+|..||.......... .. 
T Consensus       148 ~~~~~~~gt~~y~aPE~~~~~~~~---------------~~~Dvws-----lGvil~el~tg~~pf~~~~~~~~~~-~~-  205 (312)
T cd05585         148 DKTNTFCGTPEYLAPELLLGHGYT---------------KAVDWWT-----LGVLLYEMLTGLPPFYDENVNEMYR-KI-  205 (312)
T ss_pred             CccccccCCcccCCHHHHcCCCCC---------------Cccceec-----hhHHHHHHHhCCCCcCCCCHHHHHH-HH-
Confidence            233456788888888543322211               1223344     4555555555555443211110000 00 


Q ss_pred             hccccccCcCCc-------cccccccccCCCCch---HHHHhhcCccee
Q 019481          241 TITFLSALKITG-------CKSEEGYKNNSSLNP---ICQIVNQHPFYI  279 (340)
Q Consensus       241 ~~~~~~~~~~p~-------~~~~~~l~~dP~~R~---t~~~ll~hp~~~  279 (340)
                         ....+.+|.       ++...||+.||.+||   +++++++|||+.
T Consensus       206 ---~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~  251 (312)
T cd05585         206 ---LQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFS  251 (312)
T ss_pred             ---HcCCCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcC
Confidence               011122222       234478999999997   478999999993

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=8.8e-39  Score=277.14  Aligned_cols=245  Identities=16%  Similarity=0.113  Sum_probs=185.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc--CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI--TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|.-|+||+|..+.++..+|+|++++.  ...+...+.+.|.+||+.++||.+.+||..|++       +.+.+++||||
T Consensus        87 ~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet-------~~~~cl~meyC  159 (459)
T KOG0610|consen   87 CGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFET-------DKYSCLVMEYC  159 (459)
T ss_pred             CCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeec-------cceeEEEEecC
Confidence            588899999999999999999999862  223445677889999999999999999998764       34778999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc---
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV---  159 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~---  159 (340)
                      +||+|..+.+++..   +.+++..++.|+.+|+.||+|||-  .|||+||||||||||-++|++.|+||.|+.....   
T Consensus       160 pGGdL~~LrqkQp~---~~fse~~aRFYaAEvl~ALEYLHm--lGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt  234 (459)
T KOG0610|consen  160 PGGDLHSLRQKQPG---KRFSESAARFYAAEVLLALEYLHM--LGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPT  234 (459)
T ss_pred             CCccHHHHHhhCCC---CccchhhHHHHHHHHHHHHHHHHh--hceeeccCCcceeEEecCCcEEeeeccccccCCCCCe
Confidence            99999999999886   689999999999999999999999  7799999999999999999999999998642100   


Q ss_pred             ------------------------------c------------------------CCcceeeccceeeccCccccchhhh
Q 019481          160 ------------------------------E------------------------NADLTALDTSSVSAQSGKTGMEMKM  185 (340)
Q Consensus       160 ------------------------------~------------------------~~~~~~~gt~~~~~p~~~~~~~~~~  185 (340)
                                                    .                        ....+++||-.|.|||.+.|-|--.
T Consensus       235 ~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgs  314 (459)
T KOG0610|consen  235 LVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGS  314 (459)
T ss_pred             eeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCc
Confidence                                          0                        0112346777777775333322222


Q ss_pred             h-HhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhccccccCcCCccccccccccCCC
Q 019481          186 A-QLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTITFLSALKITGCKSEEGYKNNSS  264 (340)
Q Consensus       186 ~-~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~dP~  264 (340)
                      + |.|+.|.-.|++.-+.  -||++..-..+..++...+..|+....+...+               .++.+..|.+||+
T Consensus       315 AVDWWtfGIflYEmLyG~--TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~a---------------kDLIr~LLvKdP~  377 (459)
T KOG0610|consen  315 AVDWWTFGIFLYEMLYGT--TPFKGSNNKETLRNIVGQPLKFPEEPEVSSAA---------------KDLIRKLLVKDPS  377 (459)
T ss_pred             hhhHHHHHHHHHHHHhCC--CCcCCCCchhhHHHHhcCCCcCCCCCcchhHH---------------HHHHHHHhccChh
Confidence            2 4454444444443333  56677666666666665555555443221111               4556678999999


Q ss_pred             CchH----HHHhhcCcce
Q 019481          265 LNPI----CQIVNQHPFY  278 (340)
Q Consensus       265 ~R~t----~~~ll~hp~~  278 (340)
                      +|.-    |+++.+|||+
T Consensus       378 kRlg~~rGA~eIK~HpFF  395 (459)
T KOG0610|consen  378 KRLGSKRGAAEIKRHPFF  395 (459)
T ss_pred             hhhccccchHHhhcCccc
Confidence            9998    8999999999

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.9e-39  Score=284.28  Aligned_cols=233  Identities=17%  Similarity=0.123  Sum_probs=171.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|++..+++.||+|++....  .....+.+.+|++++++++||||+++++++.       +..+.+++|||
T Consensus        10 g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-------~~~~~~lv~e~   82 (291)
T cd05612          10 GTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEH-------DQRFLYMLMEY   82 (291)
T ss_pred             ecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhc-------cCCeEEEEEeC
Confidence            36899999999999999999999997422  2234566889999999999999999998654       44578899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+++.....     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++..... 
T Consensus        83 ~~~~~L~~~~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~-  154 (291)
T cd05612          83 VPGGELFSYLRNSGR-----FSNSTGLFYASEIVCALEYLHS--KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR-  154 (291)
T ss_pred             CCCCCHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeeecCCCHHHeEECCCCCEEEEecCcchhccCC-
Confidence            999999999987665     9999999999999999999999  88999999999999999999999999999876432 


Q ss_pred             CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                       ..+.+||+.|+|||.+.+.+.. ..|+|+.|...+.+.++.  .||...........+..                   
T Consensus       155 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~--~pf~~~~~~~~~~~i~~-------------------  212 (291)
T cd05612         155 -TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGY--PPFFDDNPFGIYEKILA-------------------  212 (291)
T ss_pred             -cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCC--CCCCCCCHHHHHHHHHh-------------------
Confidence             3345788989988643322211 124555444444443332  22221111000000000                   


Q ss_pred             hccccccCcCC-------ccccccccccCCCCchH-----HHHhhcCcce
Q 019481          241 TITFLSALKIT-------GCKSEEGYKNNSSLNPI-----CQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~~~~~p-------~~~~~~~l~~dP~~R~t-----~~~ll~hp~~  278 (340)
                           ..+.+|       .++...||+.||.+|++     ++++++|||+
T Consensus       213 -----~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~  257 (291)
T cd05612         213 -----GKLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWF  257 (291)
T ss_pred             -----CCcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccc
Confidence                 011112       23344779999999995     9999999999

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=8.5e-39  Score=288.52  Aligned_cols=234  Identities=15%  Similarity=0.112  Sum_probs=173.1

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|++..+++.||+|+++...  .....+.+.+|++++++++||||++++++|.       +.+..+++|||
T Consensus        27 g~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-------~~~~~~lv~e~   99 (329)
T PTZ00263         27 GTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQ-------DENRVYFLLEF   99 (329)
T ss_pred             EecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEE-------cCCEEEEEEcC
Confidence            36899999999999999999999997521  2234566889999999999999999999765       34478899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+++.....     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++..... 
T Consensus       100 ~~~~~L~~~l~~~~~-----~~~~~~~~~~~qi~~aL~~LH~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-  171 (329)
T PTZ00263        100 VVGGELFTHLRKAGR-----FPNDVAKFYHAELVLAFEYLHS--KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR-  171 (329)
T ss_pred             CCCChHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC-
Confidence            999999999988765     8999999999999999999999  88999999999999999999999999999876443 


Q ss_pred             CcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                       ..+.+||+.|+|||.+.+....               ...+.|+     +|++..++.+|..||.......... .+. 
T Consensus       172 -~~~~~gt~~y~aPE~~~~~~~~---------------~~~Diws-----lG~il~elltg~~pf~~~~~~~~~~-~i~-  228 (329)
T PTZ00263        172 -TFTLCGTPEYLAPEVIQSKGHG---------------KAVDWWT-----MGVLLYEFIAGYPPFFDDTPFRIYE-KIL-  228 (329)
T ss_pred             -cceecCChhhcCHHHHcCCCCC---------------Ccceeec-----hHHHHHHHHcCCCCCCCCCHHHHHH-HHh-
Confidence             3356788888888533221111               1222344     5555555555544443211110000 000 


Q ss_pred             ccccccCcCCc-------cccccccccCCCCchH-----HHHhhcCcce
Q 019481          242 ITFLSALKITG-------CKSEEGYKNNSSLNPI-----CQIVNQHPFY  278 (340)
Q Consensus       242 ~~~~~~~~~p~-------~~~~~~l~~dP~~R~t-----~~~ll~hp~~  278 (340)
                         ...+.+|.       ++...||+.||.+|++     ++++++|||+
T Consensus       229 ---~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f  274 (329)
T PTZ00263        229 ---AGRLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYF  274 (329)
T ss_pred             ---cCCcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCcc
Confidence               01122222       2344789999999997     6999999999

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=2.7e-38  Score=285.11  Aligned_cols=235  Identities=14%  Similarity=0.094  Sum_probs=173.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|.+..+++.||+|++.+..  .......+.+|+++++.++||||++++++|.       +....+++|||+
T Consensus         5 ~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-------~~~~~~lv~Ey~   77 (328)
T cd05593           5 KGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQ-------TKDRLCFVMEYV   77 (328)
T ss_pred             eCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE-------cCCEEEEEEeCC
Confidence            5899999999999999999999997522  2334567889999999999999999998665       344778999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc-cC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-EN  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-~~  161 (340)
                      ++|+|.+.+.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.... ..
T Consensus        78 ~~g~L~~~l~~~~~-----l~~~~~~~~~~qi~~aL~~LH~--~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~  150 (328)
T cd05593          78 NGGELFFHLSRERV-----FSEDRTRFYGAEIVSALDYLHS--GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAA  150 (328)
T ss_pred             CCCCHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCeEecccCHHHeEECCCCcEEEecCcCCccCCCccc
Confidence            99999999987665     9999999999999999999999  8899999999999999999999999999976433 22


Q ss_pred             CcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      .....+||+.|++|+.+.+..+               ....+.|+     +|++..++.+|..||.......... ..  
T Consensus       151 ~~~~~~gt~~y~aPE~~~~~~~---------------~~~~Diws-----lGvil~elltG~~Pf~~~~~~~~~~-~~--  207 (328)
T cd05593         151 TMKTFCGTPEYLAPEVLEDNDY---------------GRAVDWWG-----LGVVMYEMMCGRLPFYNQDHEKLFE-LI--  207 (328)
T ss_pred             ccccccCCcCccChhhhcCCCC---------------CccCCccc-----cchHHHHHhhCCCCCCCCCHHHHHH-Hh--
Confidence            2334578888888854322111               11223355     5555555555555553221110000 00  


Q ss_pred             ccccccCcCCcc-------ccccccccCCCCch-----HHHHhhcCcce
Q 019481          242 ITFLSALKITGC-------KSEEGYKNNSSLNP-----ICQIVNQHPFY  278 (340)
Q Consensus       242 ~~~~~~~~~p~~-------~~~~~l~~dP~~R~-----t~~~ll~hp~~  278 (340)
                        ......+|..       +...||++||.+|+     +++++++|||+
T Consensus       208 --~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~  254 (328)
T cd05593         208 --LMEDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFF  254 (328)
T ss_pred             --ccCCccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCc
Confidence              0111222222       23467999999997     89999999999

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-38  Score=281.65  Aligned_cols=242  Identities=12%  Similarity=0.033  Sum_probs=195.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeec-cCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHEL-ITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~-~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|-|++|.+|++.-||+.||+|++++ +.+......+.+|++.|+-++|||||+||+       +++....+|++.|+=.
T Consensus        28 ~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYE-------ViDTQTKlyLiLELGD  100 (864)
T KOG4717|consen   28 RGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYE-------VIDTQTKLYLILELGD  100 (864)
T ss_pred             CCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeee-------hhcccceEEEEEEecC
Confidence            68899999999999999999999997 334445567899999999999999999999       4556668899999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC-CCceEEeccccceeecccCC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE-TFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~-~~~~kl~DFGla~~~~~~~~  162 (340)
                      +|+|+++|-++..    ++.|+.+.+|++||+.|+.|+|+  ..++||||||+|+++-+ -|-+||+|||++..+.+++.
T Consensus       101 ~GDl~DyImKHe~----Gl~E~La~kYF~QI~~AI~YCHq--LHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~k  174 (864)
T KOG4717|consen  101 GGDLFDYIMKHEE----GLNEDLAKKYFAQIVHAISYCHQ--LHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKK  174 (864)
T ss_pred             CchHHHHHHhhhc----cccHHHHHHHHHHHHHHHHHHhh--hhhhcccCCcceeEEeeecCceEeeeccccccCCCcch
Confidence            9999999988875    49999999999999999999999  88999999999998865 79999999999999999999


Q ss_pred             cceeeccceeeccCccccchhhh--hHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMKM--AQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~~--~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      ..+.||+..|.||+-..|-++..  .|+|+.|+..|.+..+.  .||...+..++...|.......|......  |    
T Consensus       175 L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq--~PFqeANDSETLTmImDCKYtvPshvS~e--C----  246 (864)
T KOG4717|consen  175 LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQ--PPFQEANDSETLTMIMDCKYTVPSHVSKE--C----  246 (864)
T ss_pred             hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCC--CccccccchhhhhhhhcccccCchhhhHH--H----
Confidence            99999999999997666555543  26677666665554433  66666555555555554444444332220  1    


Q ss_pred             hccccccCcCCccccccccccCCCCchHHHHhhcCcce
Q 019481          241 TITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~~~~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                                 .++.+.+|.|||.+|.+.+++..++|+
T Consensus       247 -----------rdLI~sMLvRdPkkRAslEeI~s~~Wl  273 (864)
T KOG4717|consen  247 -----------RDLIQSMLVRDPKKRASLEEIVSTSWL  273 (864)
T ss_pred             -----------HHHHHHHHhcCchhhccHHHHhccccc
Confidence                       223345599999999999999999999

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.3e-38  Score=286.06  Aligned_cols=245  Identities=17%  Similarity=0.155  Sum_probs=198.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      +|.|+.|.+|++..++..||+|++++.. .....+.+.+|+++|+.++|||||+++.+.+       ....+|+||||+.
T Consensus        66 ~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~-------t~~~lylV~eya~  138 (596)
T KOG0586|consen   66 KGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIE-------TEATLYLVMEYAS  138 (596)
T ss_pred             cceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeee-------ecceeEEEEEecc
Confidence            6899999999999999999999998733 2333455899999999999999999999554       4457889999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +|.+++++.+++.     +.+..++.++.|+.+|++|||+  ++|+|||||++||||+.+.++||+|||++..+..+...
T Consensus       139 ~ge~~~yl~~~gr-----~~e~~ar~~F~q~vsaveYcH~--k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~l  211 (596)
T KOG0586|consen  139 GGELFDYLVKHGR-----MKEKEARAKFRQIVSAVEYCHS--KNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLML  211 (596)
T ss_pred             CchhHHHHHhccc-----chhhhhhhhhHHHHHHHHHHhh--cceeccccchhhcccccccceeeeccccceeecccccc
Confidence            9999999999988     8889999999999999999999  99999999999999999999999999999999988888


Q ss_pred             ceeeccceeeccCccccchhhhh--HhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          164 LTALDTSSVSAQSGKTGMEMKMA--QLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~~~~--~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      .++||++.|.||+.+.+.++.-.  |+|+.|...|....+.  -||.+..+..+....+.+..-.+.+...    ..   
T Consensus       212 qt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~Gs--LPFDG~~lk~Lr~rvl~gk~rIp~~ms~----dc---  282 (596)
T KOG0586|consen  212 QTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGS--LPFDGQNLKELRPRVLRGKYRIPFYMSC----DC---  282 (596)
T ss_pred             cccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecc--cccCCcccccccchheeeeecccceeec----hh---
Confidence            99999999999998887775533  6788777777765555  7777777666655544433322221111    00   


Q ss_pred             ccccccCcCCccccccccccCCCCchHHHHhhcCcceeeee
Q 019481          242 ITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFYIRLV  282 (340)
Q Consensus       242 ~~~~~~~~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~~~~~  282 (340)
                                +++..+.|..+|++|++++++.+|+|+....
T Consensus       283 ----------e~lLrk~lvl~Pskr~~~dqim~~~W~n~~~  313 (596)
T KOG0586|consen  283 ----------EDLLRKFLVLNPSKRGPCDQIMKDRWRNDLL  313 (596)
T ss_pred             ----------HHHHHHhhccCccccCCHHHhhhhcccchhh
Confidence                      1112233678999999999999999995433

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-38  Score=266.64  Aligned_cols=246  Identities=14%  Similarity=0.130  Sum_probs=195.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+|+.|--|+...+++.||+|++++. ......++.+|++++.+++ |+||++|+++|+       |+...|+|+|-|.
T Consensus        88 eGAyasVqtcv~i~t~~EYAVKiidKq-~gHsR~RvfREVe~f~~Cqgh~nilqLiefFE-------dd~~FYLVfEKm~  159 (463)
T KOG0607|consen   88 EGAYASVQTCVSIQTGKEYAVKIIDKQ-PGHSRSRVFREVETFYQCQGHKNILQLIEFFE-------DDTRFYLVFEKMR  159 (463)
T ss_pred             CccceeeeeeeeeccchhhhhhhhhcC-CchHHHHHHHHHHHHHHhcCCccHHHHHHHhc-------ccceEEEEEeccc
Confidence            699999999999999999999999875 4456788999999999996 999999999887       5557889999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC---ceEEeccccceeeccc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF---KCNLSDFSTAKVSAVE  160 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~---~~kl~DFGla~~~~~~  160 (340)
                      ||+|.++|.++..     ++|.++.+++++|+.||.|||.  +||.||||||+|||.....   -+|||||.++..+...
T Consensus       160 GGplLshI~~~~~-----F~E~EAs~vvkdia~aLdFlH~--kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~  232 (463)
T KOG0607|consen  160 GGPLLSHIQKRKH-----FNEREASRVVKDIASALDFLHT--KGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLN  232 (463)
T ss_pred             CchHHHHHHHhhh-----ccHHHHHHHHHHHHHHHHHHhh--cCcccccCCccceeecCCCCcCceeeeccccccccccC
Confidence            9999999999887     9999999999999999999999  8899999999999997644   4899999998655432


Q ss_pred             CC--------cceeeccceeeccC----------------ccccchhhhhHhHhCCccccccccccc-cCCCCCCc---c
Q 019481          161 NA--------DLTALDTSSVSAQS----------------GKTGMEMKMAQLESGGWRAHDEAEKAF-QWPYKSSH---L  212 (340)
Q Consensus       161 ~~--------~~~~~gt~~~~~p~----------------~~~~~~~~~~~~~s~g~~~~~~~~~~~-~~~~~~~~---~  212 (340)
                      ..        ..+-+|+..||||+                |.||.|++++-+++ |++++.--.+.+ -|.....-   .
T Consensus       233 ~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLs-GYpPFvG~Cg~dCGWdrGe~Cr~CQ  311 (463)
T KOG0607|consen  233 NDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLS-GYPPFVGHCGADCGWDRGEVCRVCQ  311 (463)
T ss_pred             CCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHh-CCCCccCccCCcCCccCCCccHHHH
Confidence            21        23457888999995                56777887777777 454443322221 35422111   1


Q ss_pred             cccCCCccCCchhHHHHHHHHHHHHhhhhccccccCcCCccccccccccCCCCchHHHHhhcCccee
Q 019481          213 KNTRPNLKTENETWNNFLYLLLIATLLSTITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       213 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      +.+...|..|...||+..+..+..+.             +++....|.+|+..|.+|.+.++|||+.
T Consensus       312 ~~LFesIQEGkYeFPdkdWahIS~ea-------------kdlisnLlvrda~~rlsa~~vlnhPw~~  365 (463)
T KOG0607|consen  312 NKLFESIQEGKYEFPDKDWAHISSEA-------------KDLISNLLVRDAKQRLSAAQVLNHPWVQ  365 (463)
T ss_pred             HHHHHHHhccCCcCChhhhHHhhHHH-------------HHHHHHHHhccHHhhhhhhhccCCcccc
Confidence            13344566688888877776666555             5666788999999999999999999993

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=4.7e-38  Score=282.96  Aligned_cols=235  Identities=15%  Similarity=0.076  Sum_probs=170.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||++++..+++.||+|+++...  .......+.+|++++++++||||++++++|..       ....+++|||+
T Consensus         5 ~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~-------~~~~~lv~E~~   77 (323)
T cd05595           5 KGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-------HDRLCFVMEYA   77 (323)
T ss_pred             eCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEec-------CCEEEEEEeCC
Confidence            6899999999999999999999997521  22344567789999999999999999997653       34678999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc-cC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-EN  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-~~  161 (340)
                      ++|+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.... ..
T Consensus        78 ~~~~L~~~l~~~~~-----~~~~~~~~~~~qi~~aL~~LH~--~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~  150 (323)
T cd05595          78 NGGELFFHLSRERV-----FTEERARFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA  150 (323)
T ss_pred             CCCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCC
Confidence            99999999987665     8999999999999999999999  8899999999999999999999999999876433 22


Q ss_pred             CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      .....+||+.|+||+.+.+..+. ..|+|+.|...+.                     +.+|..||.......... ...
T Consensus       151 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e---------------------ll~g~~Pf~~~~~~~~~~-~~~  208 (323)
T cd05595         151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE---------------------MMCGRLPFYNQDHERLFE-LIL  208 (323)
T ss_pred             ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHH---------------------HHhCCCCCCCCCHHHHHH-HHh
Confidence            23446789999998654322111 1244444444433                     333333332111100000 000


Q ss_pred             hccccccCcCCc-------cccccccccCCCCch-----HHHHhhcCccee
Q 019481          241 TITFLSALKITG-------CKSEEGYKNNSSLNP-----ICQIVNQHPFYI  279 (340)
Q Consensus       241 ~~~~~~~~~~p~-------~~~~~~l~~dP~~R~-----t~~~ll~hp~~~  279 (340)
                          .....+|.       .+...||++||.+|+     ++.++++|||+.
T Consensus       209 ----~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~  255 (323)
T cd05595         209 ----MEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL  255 (323)
T ss_pred             ----cCCCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcC
Confidence                01111222       233478999999998     899999999993

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5e-38  Score=287.24  Aligned_cols=241  Identities=16%  Similarity=0.131  Sum_probs=195.6

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|.||+||-|++..|+...|||-+..++ .+..+-+..|+.+.++++|.|||++.|.+.       +.++.-+.||-++
T Consensus       584 GKGTYG~VYA~RD~~tqvrIaIKEIpekd-sr~~QPLhEEIaLH~~LrHkNIVrYLGs~s-------enGf~kIFMEqVP  655 (1226)
T KOG4279|consen  584 GKGTYGTVYAARDMDTQVRIAIKEIPEKD-SREVQPLHEEIALHSTLRHKNIVRYLGSVS-------ENGFFKIFMEQVP  655 (1226)
T ss_pred             ecCceeEEEeeccccceeEEEeeeccccc-chhhccHHHHHHHHHHHhhHhHHHHhhccC-------CCCeEEEEeecCC
Confidence            47999999999999999999999998544 344566889999999999999999999654       3347778999999


Q ss_pred             CCCHHHHhcccCCCccccC--CHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC-CCceEEeccccceeecc-
Q 019481           84 KKGLENVHIGEHPASVRQL--RRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE-TFKCNLSDFSTAKVSAV-  159 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l--~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~-~~~~kl~DFGla~~~~~-  159 (340)
                      ||||.++++...+    ++  +|.++..|.+||++||.|||+  +.|+|||||-+|+|++. .|.+||+|||.++.+.. 
T Consensus       656 GGSLSsLLrskWG----PlKDNEstm~fYtkQILeGLkYLHe--n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi  729 (1226)
T KOG4279|consen  656 GGSLSSLLRSKWG----PLKDNESTMNFYTKQILEGLKYLHE--NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI  729 (1226)
T ss_pred             CCcHHHHHHhccC----CCccchhHHHHHHHHHHHHhhhhhh--cceeeccccCCcEEEeeccceEEecccccchhhccC
Confidence            9999999998876    36  899999999999999999999  88999999999999975 89999999999987655 


Q ss_pred             cCCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          160 ENADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      +....++.||..||||      |++-.     |..  .++...+.|+     .||+..+|.+|.+||-++-..   ....
T Consensus       730 nP~TETFTGTLQYMAP------EvIDq-----G~R--GYG~aADIWS-----~GCT~vEMATGrPPF~Elgsp---qAAM  788 (1226)
T KOG4279|consen  730 NPCTETFTGTLQYMAP------EVIDQ-----GPR--GYGKAADIWS-----FGCTMVEMATGRPPFVELGSP---QAAM  788 (1226)
T ss_pred             CccccccccchhhhCh------Hhhcc-----CCc--CCCchhhhhh-----ccceeEeeccCCCCeeecCCh---hHhh
Confidence            4445688899988888      55521     333  3344555688     899999999999998764332   1111


Q ss_pred             hhcc-ccccCcCCccccc-------cccccCCCCchHHHHhhcCccee
Q 019481          240 STIT-FLSALKITGCKSE-------EGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       240 ~~~~-~~~~~~~p~~~~~-------~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      .++. |..-|++|+.++.       .|+..||..||+|++||.+||+.
T Consensus       789 FkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq  836 (1226)
T KOG4279|consen  789 FKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQ  836 (1226)
T ss_pred             hhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccc
Confidence            2222 3444899988877       46999999999999999999994

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.4e-38  Score=288.98  Aligned_cols=239  Identities=13%  Similarity=0.140  Sum_probs=177.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEee---ccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHE---LITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~---~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+|-+||+|.|..+|..||.-.++   ........+++..|+.+|+.|+|||||++|++|.+.     +.....++.|
T Consensus        49 GrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~-----~n~~in~iTE  123 (632)
T KOG0584|consen   49 GRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDT-----DNKTINFITE  123 (632)
T ss_pred             ccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecC-----CCceeeeeee
Confidence            47999999999999999999955444   344556678899999999999999999999998644     3356789999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC-CCceEEeccccceeecc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE-TFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~-~~~~kl~DFGla~~~~~  159 (340)
                      ++..|+|..+.++.+.     ++.+.++.|++||++||.|||+.+.+|||||||.+||+|+. .|.|||+|+|||..+..
T Consensus       124 L~TSGtLr~Y~kk~~~-----vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~  198 (632)
T KOG0584|consen  124 LFTSGTLREYRKKHRR-----VNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK  198 (632)
T ss_pred             cccCCcHHHHHHHhcc-----CCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence            9999999999999887     99999999999999999999997789999999999999987 69999999999988766


Q ss_pred             cCCcceeeccceeeccC----------ccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHH
Q 019481          160 ENADLTALDTSSVSAQS----------GKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNF  229 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~----------~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (340)
                      .. ..+.+|||.+|||+          |++++|+.+.+|.++.++.-+-...+           .++.....|..|-. +
T Consensus       199 s~-aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~A-----------QIYKKV~SGiKP~s-l  265 (632)
T KOG0584|consen  199 SH-AKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPA-----------QIYKKVTSGIKPAA-L  265 (632)
T ss_pred             cc-cceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHH-----------HHHHHHHcCCCHHH-h
Confidence            54 44589999999995          44455555555555332221111000           11111111111100 0


Q ss_pred             HHHHHHHHhhhhccccccCcCCccccccccccCCCCchHHHHhhcCcceee
Q 019481          230 LYLLLIATLLSTITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                      ..          +.   .|.. .++.+.|+.. .+.|+||.+||+|||+..
T Consensus       266 ~k----------V~---dPev-r~fIekCl~~-~~~R~sa~eLL~d~Ff~~  301 (632)
T KOG0584|consen  266 SK----------VK---DPEV-REFIEKCLAT-KSERLSAKELLKDPFFDE  301 (632)
T ss_pred             hc----------cC---CHHH-HHHHHHHhcC-chhccCHHHHhhChhhcc
Confidence            00          00   0000 3456678877 999999999999999943

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=4.8e-38  Score=284.49  Aligned_cols=238  Identities=18%  Similarity=0.151  Sum_probs=172.6

Q ss_pred             CCCcceEEEEEEcCCCC-ceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDR-DDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~-~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.||+|++..++ ..||+|.+....  .....+.+.+|+++++.++||||++++++|.       +....+++||
T Consensus        39 g~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-------~~~~~~lv~E  111 (340)
T PTZ00426         39 GTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFK-------DESYLYLVLE  111 (340)
T ss_pred             eecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEE-------eCCEEEEEEe
Confidence            36899999999876654 689999987421  2234566889999999999999999999775       3447889999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      |+++|+|.+++.....     +++..+..++.|++.||+|||+  ++|+||||||+|||++.++++||+|||+++.....
T Consensus       112 y~~~g~L~~~i~~~~~-----~~~~~~~~~~~qi~~aL~~LH~--~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~  184 (340)
T PTZ00426        112 FVIGGEFFTFLRRNKR-----FPNDVGCFYAAQIVLIFEYLQS--LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR  184 (340)
T ss_pred             CCCCCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC
Confidence            9999999999987765     9999999999999999999999  88999999999999999999999999999876432


Q ss_pred             CCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                        ..+.+||+.|+||+.+.+.+.               ....+.|+     .|++..++.+|..||............. 
T Consensus       185 --~~~~~gt~~y~aPE~~~~~~~---------------~~~~DiwS-----lGvil~ell~G~~Pf~~~~~~~~~~~i~-  241 (340)
T PTZ00426        185 --TYTLCGTPEYIAPEILLNVGH---------------GKAADWWT-----LGIFIYEILVGCPPFYANEPLLIYQKIL-  241 (340)
T ss_pred             --cceecCChhhcCHHHHhCCCC---------------Cccccccc-----hhhHHHHHhcCCCCCCCCCHHHHHHHHh-
Confidence              345678888888843322111               11223355     5566666666555554322211111110 


Q ss_pred             hccccccCcCC---ccccccccccCCCCch-----HHHHhhcCcce
Q 019481          241 TITFLSALKIT---GCKSEEGYKNNSSLNP-----ICQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~~~~~p---~~~~~~~l~~dP~~R~-----t~~~ll~hp~~  278 (340)
                      .....-++.++   ..+...|++.||.+|+     +++++++|||+
T Consensus       242 ~~~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f  287 (340)
T PTZ00426        242 EGIIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWF  287 (340)
T ss_pred             cCCCCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCc
Confidence            00000011111   1234477999999995     89999999999

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-38  Score=306.16  Aligned_cols=242  Identities=17%  Similarity=0.144  Sum_probs=199.1

Q ss_pred             CCCCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            3 GSAPSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         3 ~~~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      +.+|.||.||.|.+.++|+..|+|-++... .....+...+|..++..++|||+|++||       +.-.+...++.|||
T Consensus      1243 Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyG-------VEvHRekv~IFMEy 1315 (1509)
T KOG4645|consen 1243 IGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYG-------VEVHREKVYIFMEY 1315 (1509)
T ss_pred             cCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCc-------eeecHHHHHHHHHH
Confidence            457999999999999999999999988622 2455677889999999999999999999       44456678899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      |++|+|.+++...+.     .+|...+.+..|++.|+.|||+  .|||||||||+||+++.+|.+|++|||.|+.+....
T Consensus      1316 C~~GsLa~ll~~gri-----~dE~vt~vyt~qll~gla~LH~--~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1316 CEGGSLASLLEHGRI-----EDEMVTRVYTKQLLEGLAYLHE--HGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred             hccCcHHHHHHhcch-----hhhhHHHHHHHHHHHHHHHHHh--cCceecCCCccceeeecCCcEEeecccceeEecCch
Confidence            999999999998765     8888999999999999999999  779999999999999999999999999999876642


Q ss_pred             C-----cceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHH
Q 019481          162 A-----DLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIA  236 (340)
Q Consensus       162 ~-----~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (340)
                      .     .....||+.||||+.+.+.-            .-.-.-..+.|+     +||+..||.+|..||.++.....+ 
T Consensus      1389 ~~~~~el~~~~GT~~YMAPEvit~t~------------~kG~~~A~DiWs-----lGCVVlEM~tGkrPW~~~dne~aI- 1450 (1509)
T KOG4645|consen 1389 QTMPGELQSMMGTPMYMAPEVITGTK------------GKGHGGAADIWS-----LGCVVLEMATGKRPWAELDNEWAI- 1450 (1509)
T ss_pred             hcCCHHHHhhcCCchhcCchhhcccc------------cCCCCcchhhhc-----ccceEEEeecCCCchhhccchhHH-
Confidence            1     23457899999884433221            112223445699     999999999999999997665332 


Q ss_pred             HhhhhccccccCcCCccccc-------cccccCCCCchHHHHhhcCcce
Q 019481          237 TLLSTITFLSALKITGCKSE-------EGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       237 ~~~~~~~~~~~~~~p~~~~~-------~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                        ...+.-+..|.+|+.+|+       .||+.||++|+++.||++|-|-
T Consensus      1451 --My~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~ 1497 (1509)
T KOG4645|consen 1451 --MYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFG 1497 (1509)
T ss_pred             --HhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcc
Confidence              234555667888887765       6899999999999999999987

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-39  Score=268.62  Aligned_cols=234  Identities=16%  Similarity=0.122  Sum_probs=189.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|.++.+|.++|+|.+..   ..+.+++.+|+.+|++++.|++|++||.|.-+.       .+|+|||||--
T Consensus        43 EGSYGSV~KAIH~EsG~v~AIK~VPV---~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~s-------DLWIVMEYCGA  112 (502)
T KOG0574|consen   43 EGSYGSVHKAIHRESGHVLAIKKVPV---DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHS-------DLWIVMEYCGA  112 (502)
T ss_pred             CCcchHHHHHHHhccCcEEEEEecCc---cchHHHHHHHHHHHHHcCCchhhhhhhhhccCC-------ceEeehhhcCC
Confidence            58999999999999999999999963   455778999999999999999999999775333       57799999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-CCc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-NAD  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~~~  163 (340)
                      ||..++++.+.+    +++|.++..+++..++||+|||.  ..-||||||..|||++.+|.+||+|||.|.++.+. .+.
T Consensus       113 GSiSDI~R~R~K----~L~E~EIs~iL~~TLKGL~YLH~--~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKR  186 (502)
T KOG0574|consen  113 GSISDIMRARRK----PLSEQEISAVLRDTLKGLQYLHD--LKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKR  186 (502)
T ss_pred             CcHHHHHHHhcC----CccHHHHHHHHHHHHhHHHHHHH--HHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhh
Confidence            999999998875    59999999999999999999999  66999999999999999999999999999887663 345


Q ss_pred             ceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhcc
Q 019481          164 LTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTIT  243 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  243 (340)
                      .+..|||-||||      |++- ++   |     +.+..+.|+     +|++..+|..|.+||.+...+..    +.-|.
T Consensus       187 NTVIGTPFWMAP------EVI~-EI---G-----Y~~~ADIWS-----LGITaIEMAEG~PPYsDIHPMRA----IFMIP  242 (502)
T KOG0574|consen  187 NTVIGTPFWMAP------EVIE-EI---G-----YDTKADIWS-----LGITAIEMAEGRPPYSDIHPMRA----IFMIP  242 (502)
T ss_pred             CccccCcccccH------HHHH-Hh---c-----cchhhhHhh-----hcchhhhhhcCCCCcccccccce----eEecc
Confidence            678899999998      4441 11   2     222445577     88888888888888888776522    22222


Q ss_pred             ccccCc--CCccc-------cccccccCCCCchHHHHhhcCcce
Q 019481          244 FLSALK--ITGCK-------SEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       244 ~~~~~~--~p~~~-------~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      -..+|.  -|+.+       ...||.+.|++|.||-+|++|||+
T Consensus       243 T~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~Fi  286 (502)
T KOG0574|consen  243 TKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFI  286 (502)
T ss_pred             CCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhh
Confidence            222222  23333       447899999999999999999999

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=4.6e-37  Score=276.86  Aligned_cols=238  Identities=16%  Similarity=0.087  Sum_probs=175.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|++..+++.||+|++++..  .......+.+|+++++.++||||++++++|.       +....+++|||
T Consensus         4 G~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~-------~~~~~~lv~E~   76 (325)
T cd05594           4 GKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ-------THDRLCFVMEY   76 (325)
T ss_pred             eeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEE-------cCCEEEEEEeC
Confidence            36899999999999999999999997521  2234456788999999999999999999665       33477899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc-c
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-E  160 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-~  160 (340)
                      +++|+|.+++.....     +++..+..++.||+.||+|||+. ++|+||||||+|||++.++.+||+|||+++.... .
T Consensus        77 ~~~~~L~~~l~~~~~-----l~~~~~~~~~~qi~~aL~~lH~~-~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~  150 (325)
T cd05594          77 ANGGELFFHLSRERV-----FSEDRARFYGAEIVSALDYLHSE-KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG  150 (325)
T ss_pred             CCCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC
Confidence            999999999987665     99999999999999999999961 3699999999999999999999999999976433 2


Q ss_pred             CCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      ......+||+.|+||+.+.+.+               +....+.|+     +|++..++.+|..||.......... .. 
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~---------------~~~~~Diws-----lG~il~el~tG~~Pf~~~~~~~~~~-~i-  208 (325)
T cd05594         151 ATMKTFCGTPEYLAPEVLEDND---------------YGRAVDWWG-----LGVVMYEMMCGRLPFYNQDHEKLFE-LI-  208 (325)
T ss_pred             cccccccCCcccCCHHHHccCC---------------CCCcccccc-----ccceeeeeccCCCCCCCCCHHHHHH-HH-
Confidence            2333456888888884332211               112234466     6677777777666664322111000 00 


Q ss_pred             hccccccCcCCcc-------ccccccccCCCCch-----HHHHhhcCccee
Q 019481          241 TITFLSALKITGC-------KSEEGYKNNSSLNP-----ICQIVNQHPFYI  279 (340)
Q Consensus       241 ~~~~~~~~~~p~~-------~~~~~l~~dP~~R~-----t~~~ll~hp~~~  279 (340)
                         ......+|..       +...||++||.+|+     +++++++|||+.
T Consensus       209 ---~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~  256 (325)
T cd05594         209 ---LMEEIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFA  256 (325)
T ss_pred             ---hcCCCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcC
Confidence               0111222222       23467999999997     899999999993

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=2.5e-37  Score=273.49  Aligned_cols=164  Identities=15%  Similarity=0.066  Sum_probs=136.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc--hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP--LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|.+..+++.||+|.+.+...  ......+.+|++++++++|+||++++++|.       +....++++||
T Consensus         9 g~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~-------~~~~~~lv~e~   81 (285)
T cd05631           9 GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYE-------TKDALCLVLTI   81 (285)
T ss_pred             ecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEc-------cCCeEEEEEEe
Confidence            368999999999999999999999875321  223345788999999999999999999664       33467899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+++.....   ..+++..+..++.|++.||+|||+  ++|+||||||+|||++.++.+||+|||+++......
T Consensus        82 ~~~g~L~~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~--~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~  156 (285)
T cd05631          82 MNGGDLKFHIYNMGN---PGFDEQRAIFYAAELCCGLEDLQR--ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE  156 (285)
T ss_pred             cCCCcHHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHHh--CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence            999999988865432   248999999999999999999999  889999999999999999999999999998765544


Q ss_pred             CcceeeccceeeccCccc
Q 019481          162 ADLTALDTSSVSAQSGKT  179 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~  179 (340)
                      ......||..|+||+.+.
T Consensus       157 ~~~~~~g~~~y~aPE~~~  174 (285)
T cd05631         157 TVRGRVGTVGYMAPEVIN  174 (285)
T ss_pred             eecCCCCCCCccCHhhhc
Confidence            444567888899886443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=1.1e-37  Score=280.33  Aligned_cols=237  Identities=16%  Similarity=0.108  Sum_probs=171.1

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.||+|+++.+++.||+|++++..  .....+.+.+|..+++.+ +||||++++++|.       +....+++||
T Consensus         4 g~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~-------~~~~~~iv~E   76 (320)
T cd05590           4 GKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQ-------TPDRLFFVME   76 (320)
T ss_pred             eeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEE-------cCCEEEEEEc
Confidence            36899999999999999999999997521  223345677888888876 6999999999765       3447889999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc-
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-  159 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-  159 (340)
                      |+++|+|.+++.....     +++..+..++.|++.||+|||+  ++|+||||||+|||++.++.+||+|||+++.... 
T Consensus        77 y~~~g~L~~~i~~~~~-----l~~~~~~~~~~ql~~~L~~lH~--~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~  149 (320)
T cd05590          77 FVNGGDLMFHIQKSRR-----FDEARARFYAAEITSALMFLHD--KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN  149 (320)
T ss_pred             CCCCchHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC
Confidence            9999999999987765     9999999999999999999999  8899999999999999999999999999976432 


Q ss_pred             cCCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          160 ENADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      .......+||+.|+||+...+..+.               ...+.|+     +|++..++.+|..||............ 
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~~~~---------------~~~Diws-----lG~il~el~~g~~Pf~~~~~~~~~~~i-  208 (320)
T cd05590         150 GKTTSTFCGTPDYIAPEILQEMLYG---------------PSVDWWA-----MGVLLYEMLCGHAPFEAENEDDLFEAI-  208 (320)
T ss_pred             CCcccccccCccccCHHHHcCCCCC---------------Cccchhh-----hHHHHHHHhhCCCCCCCCCHHHHHHHH-
Confidence            2333456788888888533221111               1122344     444444444444444322111111100 


Q ss_pred             hhccccccCcCCc-------cccccccccCCCCchHH------HHhhcCccee
Q 019481          240 STITFLSALKITG-------CKSEEGYKNNSSLNPIC------QIVNQHPFYI  279 (340)
Q Consensus       240 ~~~~~~~~~~~p~-------~~~~~~l~~dP~~R~t~------~~ll~hp~~~  279 (340)
                          ....+..|.       ++...||++||.+|+++      +++++|||+.
T Consensus       209 ----~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~  257 (320)
T cd05590         209 ----LNDEVVYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFK  257 (320)
T ss_pred             ----hcCCCCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcC
Confidence                011112222       23447799999999998      8999999993

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.9e-37  Score=277.63  Aligned_cols=240  Identities=15%  Similarity=0.052  Sum_probs=175.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|++..+++.||+|++++..  .....+.+.+|+++++.++||||++++++|.       +..+.+++|||
T Consensus        10 g~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~-------~~~~~~lv~e~   82 (333)
T cd05600          10 GQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQ-------DDEYLYLAMEY   82 (333)
T ss_pred             eecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEE-------cCCEEEEEEeC
Confidence            46899999999999999999999997532  1234466889999999999999999999665       44478899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+++.....     +++..++.++.||+.||.|||+  ++|+||||||+|||++.++.+||+|||+++....  
T Consensus        83 ~~g~~L~~~l~~~~~-----l~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~--  153 (333)
T cd05600          83 VPGGDFRTLLNNLGV-----LSEDHARFYMAEMFEAVDALHE--LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT--  153 (333)
T ss_pred             CCCCCHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEECCCCCEEEEeCcCCccccc--
Confidence            999999999987665     8999999999999999999999  7899999999999999999999999999986544  


Q ss_pred             CcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHH-Hhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIA-TLLS  240 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~  240 (340)
                      .....+||+.|++|+.+.+.++               ....+.|+     +|++..++.+|..||.......... ....
T Consensus       154 ~~~~~~gt~~y~aPE~~~~~~~---------------~~~~Dvws-----lG~il~ell~g~~pf~~~~~~~~~~~i~~~  213 (333)
T cd05600         154 YANSVVGSPDYMAPEVLRGKGY---------------DFTVDYWS-----LGCMLYEFLCGFPPFSGSTPNETWENLKYW  213 (333)
T ss_pred             ccCCcccCccccChhHhcCCCC---------------CCccceec-----chHHHhhhhhCCCCCCCCCHHHHHHHHHhc
Confidence            2345568888888854332211               11233365     6666666666666654321111000 0000


Q ss_pred             hcccccc--C----cCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          241 TITFLSA--L----KIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       241 ~~~~~~~--~----~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ......+  .    .++   ..+...||+.+|.+||+++++++|||+.
T Consensus       214 ~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~  261 (333)
T cd05600         214 KETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFK  261 (333)
T ss_pred             cccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccC
Confidence            0001111  0    111   1123467999999999999999999993

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=2.3e-37  Score=274.17  Aligned_cols=184  Identities=15%  Similarity=0.087  Sum_probs=148.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|.++..........+.+|++++++++||||+++++++.       +....++++||++ 
T Consensus        15 ~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-------~~~~~~lv~e~~~-   86 (288)
T cd07871          15 EGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIH-------TERCLTLVFEYLD-   86 (288)
T ss_pred             cCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEc-------CCCeEEEEEeCCC-
Confidence            68999999999999999999999975433334456789999999999999999999665       3346789999997 


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-Cc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-AD  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~~  163 (340)
                      |+|.+++.....    .+++..+..++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+++...... ..
T Consensus        87 ~~l~~~l~~~~~----~~~~~~~~~~~~qi~~aL~~LH~--~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~  160 (288)
T cd07871          87 SDLKQYLDNCGN----LMSMHNVKIFMFQLLRGLSYCHK--RKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTY  160 (288)
T ss_pred             cCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccc
Confidence            499999876553    38999999999999999999999  889999999999999999999999999998654322 22


Q ss_pred             ceeeccceeeccCccccch--hhhhHhHhCCcccccccccc
Q 019481          164 LTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~  202 (340)
                      ....||+.|+||+.+.+..  -...|+|+.|...+.+.++.
T Consensus       161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~  201 (288)
T cd07871         161 SNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGR  201 (288)
T ss_pred             cCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCC
Confidence            3456788899997654321  12357777777776665554

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=2.4e-37  Score=278.38  Aligned_cols=240  Identities=18%  Similarity=0.103  Sum_probs=171.5

Q ss_pred             CCCcceEEEEEEcC---CCCceEEEEEeeccC---chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeee
Q 019481            4 SAPSFSVLIHVPFP---DDRDDVMLKLHELIT---PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWK   77 (340)
Q Consensus         4 ~~G~fg~V~~~~~~---~~~~~vAiK~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~   77 (340)
                      ..|+||.||++++.   .+++.||+|+++...   .......+.+|+++++.++||||++++++|..       ....++
T Consensus         5 g~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~-------~~~~~l   77 (323)
T cd05584           5 GKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQT-------GGKLYL   77 (323)
T ss_pred             eecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEec-------CCeEEE
Confidence            36899999999864   478899999997521   12334557889999999999999999997753       346789


Q ss_pred             eeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceee
Q 019481           78 NKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVS  157 (340)
Q Consensus        78 ~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~  157 (340)
                      +|||+++|+|.+.+...+.     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++..
T Consensus        78 v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  150 (323)
T cd05584          78 ILEYLSGGELFMHLEREGI-----FMEDTACFYLSEISLALEHLHQ--QGIIYRDLKPENILLDAQGHVKLTDFGLCKES  150 (323)
T ss_pred             EEeCCCCchHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHeEECCCCCEEEeeCcCCeec
Confidence            9999999999999987665     8999999999999999999999  88999999999999999999999999999754


Q ss_pred             cc-cCCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHH
Q 019481          158 AV-ENADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIA  236 (340)
Q Consensus       158 ~~-~~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (340)
                      .. .......+||+.|+|||.+.+.+..               ...+.|+     +|++..++.+|..||..........
T Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~---------------~~~Diws-----lG~il~ell~G~~pf~~~~~~~~~~  210 (323)
T cd05584         151 IHEGTVTHTFCGTIEYMAPEILMRSGHG---------------KAVDWWS-----LGALMYDMLTGAPPFTAENRKKTID  210 (323)
T ss_pred             ccCCCcccccCCCccccChhhccCCCCC---------------Ccceecc-----cHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            33 2233445788889998644322211               1223344     5555555555554443321111111


Q ss_pred             HhhhhccccccCcCC---ccccccccccCCCCch-----HHHHhhcCcce
Q 019481          237 TLLSTITFLSALKIT---GCKSEEGYKNNSSLNP-----ICQIVNQHPFY  278 (340)
Q Consensus       237 ~~~~~~~~~~~~~~p---~~~~~~~l~~dP~~R~-----t~~~ll~hp~~  278 (340)
                      .. .......++.++   .++...|+++||++||     +++++++|||+
T Consensus       211 ~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~  259 (323)
T cd05584         211 KI-LKGKLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFF  259 (323)
T ss_pred             HH-HcCCCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCc
Confidence            00 000111111111   1234478999999999     89999999999

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-37  Score=279.36  Aligned_cols=240  Identities=22%  Similarity=0.200  Sum_probs=187.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeec--cCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHEL--ITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~--~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||-|++..+.++||||...-  +.+.+.-+++.+|+..|++++|||+|.+.|.|.       .+..||+|||||
T Consensus        36 HGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyL-------re~TaWLVMEYC  108 (948)
T KOG0577|consen   36 HGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYL-------REHTAWLVMEYC  108 (948)
T ss_pred             CCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceee-------ccchHHHHHHHH
Confidence            69999999999999999999999863  334455578999999999999999999999664       444799999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      - ||-.|++.-..+    ++.+.++..|+.+.++||+|||+  .+.||||||..|||+++.|.|||+|||.|....+   
T Consensus       109 l-GSAsDlleVhkK----plqEvEIAAi~~gaL~gLaYLHS--~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P---  178 (948)
T KOG0577|consen  109 L-GSASDLLEVHKK----PLQEVEIAAITHGALQGLAYLHS--HNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP---  178 (948)
T ss_pred             h-ccHHHHHHHHhc----cchHHHHHHHHHHHHHHHHHHHH--hhHHhhhccccceEecCCCeeeeccccchhhcCc---
Confidence            6 598888877665    49999999999999999999999  7799999999999999999999999999987654   


Q ss_pred             cceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhc
Q 019481          163 DLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTI  242 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  242 (340)
                      ..+++|||.||||      |++++.    .-.-|+-  ..+.|+     +|++..++....+|.=...-+    ..+..|
T Consensus       179 AnsFvGTPywMAP------EVILAM----DEGqYdg--kvDvWS-----LGITCIELAERkPPlFnMNAM----SALYHI  237 (948)
T KOG0577|consen  179 ANSFVGTPYWMAP------EVILAM----DEGQYDG--KVDVWS-----LGITCIELAERKPPLFNMNAM----SALYHI  237 (948)
T ss_pred             hhcccCCccccch------hHheec----cccccCC--ccceee-----ccchhhhhhhcCCCccCchHH----HHHHHH
Confidence            6689999999999      555331    0012222  334488     888888888866664333322    112233


Q ss_pred             cccccCcCCcc--------ccccccccCCCCchHHHHhhcCcceeeee
Q 019481          243 TFLSALKITGC--------KSEEGYKNNSSLNPICQIVNQHPFYIRLV  282 (340)
Q Consensus       243 ~~~~~~~~p~~--------~~~~~l~~dP~~R~t~~~ll~hp~~~~~~  282 (340)
                      .-...|.++..        |...||++-|..|||.++|++|+|+.+..
T Consensus       238 AQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~R  285 (948)
T KOG0577|consen  238 AQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRER  285 (948)
T ss_pred             HhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCC
Confidence            33344444432        24479999999999999999999995543

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=1.2e-36  Score=274.85  Aligned_cols=248  Identities=14%  Similarity=0.052  Sum_probs=178.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|++..+++.||+|+++...  .....+.+.+|+.+++.++||||++++++|.       +....+++|||
T Consensus        10 g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~-------~~~~~~lv~e~   82 (330)
T cd05601          10 GRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQ-------DKDNLYLVMEY   82 (330)
T ss_pred             EeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEe-------cCCeEEEEECC
Confidence            36889999999999999999999998532  2234566889999999999999999999664       34478899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+++.....    .+++..+..++.||+.||+|||+  ++|+||||||+|||++.++++||+|||+++.+....
T Consensus        83 ~~~~~L~~~l~~~~~----~l~~~~~~~~~~qi~~aL~~lH~--~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~  156 (330)
T cd05601          83 QPGGDLLSLLNRYED----QFDEDMAQFYLAELVLAIHSVHQ--MGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK  156 (330)
T ss_pred             CCCCCHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH--CCeEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence            999999999987633    39999999999999999999999  889999999999999999999999999998765433


Q ss_pred             Cc--ceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          162 AD--LTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       162 ~~--~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      ..  ....||+.|+|||.+.+...      . +...  +....+.|+     .|++..++.+|..||.............
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~------~-~~~~--~~~~~Diws-----lG~il~el~~g~~Pf~~~~~~~~~~~i~  222 (330)
T cd05601         157 MVNSKLPVGTPDYIAPEVLTTMNG------D-GKGT--YGVECDWWS-----LGVIAYEMIYGRSPFHEGTSAKTYNNIM  222 (330)
T ss_pred             ceeeecccCCccccCHHHhccccc------c-ccCC--CCCcceeec-----ccceeeeeccCCCCCCCCCHHHHHHHHH
Confidence            22  23357888888743321110      0 0111  112334476     6777777777777664322211111111


Q ss_pred             h---hccccccCcCCc---cccccccccCCCCchHHHHhhcCccee
Q 019481          240 S---TITFLSALKITG---CKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       240 ~---~~~~~~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      .   ...+...+.++.   ++...+++ ||.+||+++++++|||+.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~  267 (330)
T cd05601         223 NFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFS  267 (330)
T ss_pred             cCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcC
Confidence            1   111111122222   22335676 999999999999999993

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=2.3e-37  Score=278.27  Aligned_cols=235  Identities=17%  Similarity=0.108  Sum_probs=172.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||+|++..+++.||+|++++..  .....+.+..|.++++.+ +||||++++++|.       +....+++|||
T Consensus         5 ~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~-------~~~~~~lv~E~   77 (321)
T cd05591           5 KGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQ-------TKDRLFFVMEY   77 (321)
T ss_pred             cCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEE-------cCCeEEEEEeC
Confidence            6899999999999999999999997521  223345577899998876 7999999999775       33468899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc-c
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-E  160 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-~  160 (340)
                      +++|+|.+.+.....     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.... .
T Consensus        78 ~~~~~L~~~l~~~~~-----~~~~~~~~~~~qi~~aL~~LH~--~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~  150 (321)
T cd05591          78 VNGGDLMFQIQRSRK-----FDEPRSRFYAAEVTLALMFLHR--HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG  150 (321)
T ss_pred             CCCCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHeEECCCCCEEEeecccceecccCC
Confidence            999999999987665     9999999999999999999999  7899999999999999999999999999976433 2


Q ss_pred             CCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      ......+||+.|+||+.+.+..               +....+.|+     .|++..++.+|..||............  
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~---------------~~~~~Dvws-----lG~il~el~tg~~Pf~~~~~~~~~~~i--  208 (321)
T cd05591         151 VTTTTFCGTPDYIAPEILQELE---------------YGPSVDWWA-----LGVLMYEMMAGQPPFEADNEDDLFESI--  208 (321)
T ss_pred             ccccccccCccccCHHHHcCCC---------------CCCccceec-----hhHHHHHHhcCCCCCCCCCHHHHHHHH--
Confidence            2334556888888874322111               111233355     566666666666655432221111111  


Q ss_pred             hccccccCcCCc-------cccccccccCCCCch-------HHHHhhcCcce
Q 019481          241 TITFLSALKITG-------CKSEEGYKNNSSLNP-------ICQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~~~~~p~-------~~~~~~l~~dP~~R~-------t~~~ll~hp~~  278 (340)
                        . ...+..|.       ++...||++||++|+       +++++++|||+
T Consensus       209 --~-~~~~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~  257 (321)
T cd05591         209 --L-HDDVLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFF  257 (321)
T ss_pred             --H-cCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCcc
Confidence              0 11111222       234467999999999       89999999999

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-37  Score=254.05  Aligned_cols=252  Identities=19%  Similarity=0.149  Sum_probs=188.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      +|+.|.|++++.+.+|...|+|........+..+++++.++++.+.. +|+||+.+|||..+.       .+++.||.|.
T Consensus       102 sGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~-------dV~IcMelMs  174 (391)
T KOG0983|consen  102 SGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNT-------DVFICMELMS  174 (391)
T ss_pred             CCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCc-------hHHHHHHHHH
Confidence            68899999999999999999999998777777888999999987775 999999999997664       3447789885


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                       .-++.+++.-..    +++|..+-.+...+++||.||.+- ++|+|||+||+|||+|+.|++|+||||++..+.++...
T Consensus       175 -~C~ekLlkrik~----piPE~ilGk~tva~v~AL~YLKeK-H~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAh  248 (391)
T KOG0983|consen  175 -TCAEKLLKRIKG----PIPERILGKMTVAIVKALYYLKEK-HGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAH  248 (391)
T ss_pred             -HHHHHHHHHhcC----CchHHhhhhhHHHHHHHHHHHHHh-cceeecccCccceEEccCCCEEeecccccceeeccccc
Confidence             356666665554    599999999999999999999871 34999999999999999999999999999998888878


Q ss_pred             ceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhcc
Q 019481          164 LTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTIT  243 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  243 (340)
                      ....|.+.||||+..-.+.--            .+....+.|+     +|++..++.+|..||+.......   ...++-
T Consensus       249 trsAGC~~YMaPERidp~~~~------------kYDiRaDVWS-----lGITlveLaTg~yPy~~c~tdFe---~ltkvl  308 (391)
T KOG0983|consen  249 TRSAGCAAYMAPERIDPPDKP------------KYDIRADVWS-----LGITLVELATGQYPYKGCKTDFE---VLTKVL  308 (391)
T ss_pred             ccccCCccccCccccCCCCCC------------ccchhhhhhh-----hccchhhhhcccCCCCCCCccHH---HHHHHH
Confidence            888999999999755433211            1111223355     55555555555555554211111   111111


Q ss_pred             ccccCcCCcc--cc-------ccccccCCCCchHHHHhhcCcceeeeehhhHHHH
Q 019481          244 FLSALKITGC--KS-------EEGYKNNSSLNPICQIVNQHPFYIRLVTTFNSVA  289 (340)
Q Consensus       244 ~~~~~~~p~~--~~-------~~~l~~dP~~R~t~~~ll~hp~~~~~~~~~~~~~  289 (340)
                      -.++|.+|..  ||       ..||++|+.+||...+|++|||+.+.....+.|+
T Consensus       309 n~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~a~~dVa  363 (391)
T KOG0983|consen  309 NEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYETAEVDVA  363 (391)
T ss_pred             hcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecchhhccHH
Confidence            2344554432  33       3789999999999999999999976666666554

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=7e-37  Score=276.03  Aligned_cols=159  Identities=18%  Similarity=0.140  Sum_probs=135.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||+|++..+++.||+|++++..  .....+.+.+|..+++++ +||||++++++|.       +....+++|||
T Consensus         5 ~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~-------~~~~~~lv~e~   77 (329)
T cd05588           5 RGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQ-------TESRLFFVIEF   77 (329)
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEE-------cCCEEEEEEeC
Confidence            6889999999999999999999998532  223445678999999998 6999999999765       34477899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceee-ccc
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVS-AVE  160 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~-~~~  160 (340)
                      +++|+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.. ...
T Consensus        78 ~~~g~L~~~~~~~~~-----l~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~  150 (329)
T cd05588          78 VSGGDLMFHMQRQRK-----LPEEHARFYSAEISLALNFLHE--RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG  150 (329)
T ss_pred             CCCCCHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHeEECCCCCEEECcCccccccccCC
Confidence            999999999987665     9999999999999999999999  88999999999999999999999999999753 233


Q ss_pred             CCcceeeccceeeccCc
Q 019481          161 NADLTALDTSSVSAQSG  177 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~  177 (340)
                      ....+.+||+.|+||+.
T Consensus       151 ~~~~~~~gt~~y~aPE~  167 (329)
T cd05588         151 DTTSTFCGTPNYIAPEI  167 (329)
T ss_pred             CccccccCCccccCHHH
Confidence            34456688999998853

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=1.3e-36  Score=274.52  Aligned_cols=183  Identities=20%  Similarity=0.112  Sum_probs=147.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||++++..++..+|+|++.........+.+.+|++++++++||||++++++|..       ....+++|||++
T Consensus        14 g~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~~~lv~e~~~   86 (331)
T cd06649          14 GAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-------DGEISICMEHMD   86 (331)
T ss_pred             cCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-------CCEEEEEeecCC
Confidence            3689999999999999999999999865444556779999999999999999999997653       346789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCC-ceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEK-QVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~-~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      +|+|.+++.....     +++..+..++.|++.||.|||+  + +|+||||||+|||++.++.+||+|||+++..... .
T Consensus        87 ~~~L~~~l~~~~~-----~~~~~~~~~~~~i~~~l~~lH~--~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~  158 (331)
T cd06649          87 GGSLDQVLKEAKR-----IPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-M  158 (331)
T ss_pred             CCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHhh--cCCEEcCCCChhhEEEcCCCcEEEccCccccccccc-c
Confidence            9999999987665     8999999999999999999998  5 4999999999999999999999999999866443 2


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccc
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEK  201 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~  201 (340)
                      .....||+.|++|+...+..+. ..|+|+.|...+.+.++
T Consensus       159 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg  198 (331)
T cd06649         159 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIG  198 (331)
T ss_pred             cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhC
Confidence            3345788899999644322211 23555555555544433

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=1.3e-36  Score=279.75  Aligned_cols=139  Identities=16%  Similarity=0.064  Sum_probs=123.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||+||+|++..+++.||+|++++..  .....+.+.+|++++++++||||++++++|.       +..+.+++|||
T Consensus        10 G~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~-------~~~~~~lv~E~   82 (381)
T cd05626          10 GIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQ-------DKDNLYFVMDY   82 (381)
T ss_pred             eecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEe-------cCCEEEEEEec
Confidence            36999999999999999999999997522  2234567889999999999999999999765       34478899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      ++||+|.+++.....     +++..++.++.||+.||+|||+  .+|+||||||+|||++.++++||+|||+++.
T Consensus        83 ~~gg~L~~~l~~~~~-----~~e~~~~~~~~qi~~aL~~LH~--~givHrDlKp~Nili~~~~~~kL~DFGl~~~  150 (381)
T cd05626          83 IPGGDMMSLLIRMEV-----FPEVLARFYIAELTLAIESVHK--MGFIHRDIKPDNILIDLDGHIKLTDFGLCTG  150 (381)
T ss_pred             CCCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCeeecCCcHHHEEECCCCCEEEeeCcCCcc
Confidence            999999999987665     9999999999999999999999  8899999999999999999999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=6e-37  Score=272.62  Aligned_cols=247  Identities=14%  Similarity=0.147  Sum_probs=194.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeec-cCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHEL-ITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~-~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .+|.||+||-|+++++|+.||+|++++ ....+...++.+|+.||+++.||.||.+...|++       .+.+++|||-+
T Consensus       573 GSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET-------~ervFVVMEKl  645 (888)
T KOG4236|consen  573 GSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFET-------PERVFVVMEKL  645 (888)
T ss_pred             cCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecC-------CceEEEEehhh
Confidence            479999999999999999999999997 3444556789999999999999999999886664       44677999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCC---CceEEeccccceeecc
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDET---FKCNLSDFSTAKVSAV  159 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~---~~~kl~DFGla~~~~~  159 (340)
                      . |+..+.|-....   .++++.....++.||+.||+|||.  ++|+|+||||+|||+.+.   -.+||||||.||.+.+
T Consensus       646 ~-GDMLEMILSsEk---gRL~er~TkFlvtQIL~ALr~LH~--knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE  719 (888)
T KOG4236|consen  646 H-GDMLEMILSSEK---GRLPERITKFLVTQILVALRYLHF--KNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE  719 (888)
T ss_pred             c-chHHHHHHHhhc---ccchHHHHHHHHHHHHHHHHHhhh--cceeeccCCchheeeccCCCCCceeeccccceeecch
Confidence            5 576666655443   469999999999999999999999  899999999999999764   3699999999999998


Q ss_pred             cCCcceeeccceeeccCccccchhhhh-HhHhCCccccccccccccCCCCCCcc---cccCCCccCCchhHHHHHHHHHH
Q 019481          160 ENADLTALDTSSVSAQSGKTGMEMKMA-QLESGGWRAHDEAEKAFQWPYKSSHL---KNTRPNLKTENETWNNFLYLLLI  235 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~~~~~~~~~~~-~~~s~g~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~  235 (340)
                      ..-..+..|||.|.||+.....|+-.. |+|+.|+..|.-..+.  +||+....   ++.-....-...||.+....+..
T Consensus       720 ksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGT--FPFNEdEdIndQIQNAaFMyPp~PW~eis~~Aid  797 (888)
T KOG4236|consen  720 KSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGT--FPFNEDEDINDQIQNAAFMYPPNPWSEISPEAID  797 (888)
T ss_pred             hhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEeccc--ccCCCccchhHHhhccccccCCCchhhcCHHHHH
Confidence            887788899999999988888887755 8998887776655555  77654321   11111222245566665554332


Q ss_pred             HHhhhhccccccCcCCccccccccccCCCCchHHHHhhcCcceeeeehh
Q 019481          236 ATLLSTITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFYIRLVTT  284 (340)
Q Consensus       236 ~~~~~~~~~~~~~~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~~~~~~~  284 (340)
                      .                  ....|+..-.+|.|++.-+.|||+ +.+++
T Consensus       798 l------------------In~LLqVkm~kRysvdk~lsh~Wl-q~yq~  827 (888)
T KOG4236|consen  798 L------------------INNLLQVKMRKRYSVDKSLSHPWL-QDYQT  827 (888)
T ss_pred             H------------------HHHHHHHHHHHhcchHhhccchhh-hcchH
Confidence            2                  225678888999999999999999 44443

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=1.5e-36  Score=268.73  Aligned_cols=183  Identities=14%  Similarity=0.131  Sum_probs=141.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|+++.+++.||+|+++... .....+.+.+|++++++++||||++++++|.       +....+++|||+
T Consensus        10 g~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------~~~~~~lv~e~~   82 (287)
T cd07848          10 GEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFR-------RRGKLYLVFEYV   82 (287)
T ss_pred             cccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEe-------cCCEEEEEEecC
Confidence            36889999999999999999999997532 2234566789999999999999999999765       344788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-  161 (340)
                      +++++..+......     +++..++.++.|++.||+|||+  .+|+||||||+||+++.++.+||+|||+++...... 
T Consensus        83 ~~~~l~~~~~~~~~-----~~~~~~~~~~~qi~~~L~~lH~--~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~  155 (287)
T cd07848          83 EKNMLELLEEMPNG-----VPPEKVRSYIYQLIKAIHWCHK--NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN  155 (287)
T ss_pred             CCCHHHHHHhcCCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc
Confidence            98777665544333     9999999999999999999999  779999999999999999999999999998765432 


Q ss_pred             -CcceeeccceeeccCccccchhh-hhHhHhCCcccccccc
Q 019481          162 -ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAE  200 (340)
Q Consensus       162 -~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~  200 (340)
                       ......||+.|++|+...+.++. ..|+|+.|...+.+..
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~  196 (287)
T cd07848         156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSD  196 (287)
T ss_pred             ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHh
Confidence             22345688888888643322211 2345554444444433

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=3.3e-36  Score=274.31  Aligned_cols=237  Identities=16%  Similarity=0.165  Sum_probs=170.4

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|++..+++.||+|++.........+.+.+|++++++++|+||++++++|.       +....++++||++
T Consensus        83 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------~~~~~~lv~e~~~  155 (353)
T PLN00034         83 GSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFD-------HNGEIQVLLEFMD  155 (353)
T ss_pred             cCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEec-------cCCeEEEEEecCC
Confidence            368899999999999999999999975444455677899999999999999999999765       3446789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-C
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-A  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~  162 (340)
                      +|+|.+..         ..++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.+.... .
T Consensus       156 ~~~L~~~~---------~~~~~~~~~i~~qi~~aL~~LH~--~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~  224 (353)
T PLN00034        156 GGSLEGTH---------IADEQFLADVARQILSGIAYLHR--RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDP  224 (353)
T ss_pred             CCcccccc---------cCCHHHHHHHHHHHHHHHHHHHH--CCEeecCCCHHHEEEcCCCCEEEcccccceeccccccc
Confidence            99986432         26778889999999999999999  789999999999999999999999999998765432 2


Q ss_pred             cceeeccceeeccCccccc---h-h--hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHH
Q 019481          163 DLTALDTSSVSAQSGKTGM---E-M--KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIA  236 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~---~-~--~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (340)
                      .....||..|++||.+...   + .  ...|+|+.|...+.+..+...|.  ....           ..|.....     
T Consensus       225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~--~~~~-----------~~~~~~~~-----  286 (353)
T PLN00034        225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFG--VGRQ-----------GDWASLMC-----  286 (353)
T ss_pred             ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCC--CCCC-----------ccHHHHHH-----
Confidence            3345789999999754210   0 0  13466666655555444332221  1000           01111100     


Q ss_pred             HhhhhccccccCcCCc-------cccccccccCCCCchHHHHhhcCcceee
Q 019481          237 TLLSTITFLSALKITG-------CKSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       237 ~~~~~~~~~~~~~~p~-------~~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                          .+.....+..+.       ++...||+.||++||+++++++|||+..
T Consensus       287 ----~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~  333 (353)
T PLN00034        287 ----AICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILR  333 (353)
T ss_pred             ----HHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCccccc
Confidence                011111122221       2344789999999999999999999943

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=1.3e-36  Score=277.94  Aligned_cols=140  Identities=18%  Similarity=0.109  Sum_probs=124.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||+||+|.+..+++.||+|++++..  .......+.+|+.++++++||||+++++.|.       +....+++|||+
T Consensus        11 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~-------~~~~~~lv~E~~   83 (363)
T cd05628          11 RGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQ-------DKLNLYLIMEFL   83 (363)
T ss_pred             eCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEe-------cCCeEEEEEcCC
Confidence            6899999999999999999999997522  2233456788999999999999999999765       444788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      +||+|.+++.+...     +++..++.++.|++.||+|||+  ++|+||||||+|||++.++++||+|||+++.+.
T Consensus        84 ~gg~L~~~l~~~~~-----l~~~~~~~~~~qi~~aL~~lH~--~givHrDlKp~NILi~~~~~vkL~DFGla~~~~  152 (363)
T cd05628          84 PGGDMMTLLMKKDT-----LTEEETQFYIAETVLAIDSIHQ--LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLK  152 (363)
T ss_pred             CCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCeEecCCCHHHeEECCCCCEEEeeccCccccc
Confidence            99999999987665     9999999999999999999999  889999999999999999999999999997653

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=2.7e-36  Score=272.12  Aligned_cols=160  Identities=17%  Similarity=0.124  Sum_probs=135.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc--CchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI--TPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||+|++..+++.||+|++++.  ......+.+.+|+.++.++ +||||++++++|..       ....+++|||
T Consensus         5 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~-------~~~~~lv~E~   77 (329)
T cd05618           5 RGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-------ESRLFFVIEY   77 (329)
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEe-------CCEEEEEEeC
Confidence            688999999999999999999999853  2234456678899998877 79999999997653       3477899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc-c
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-E  160 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-~  160 (340)
                      +++|+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.... .
T Consensus        78 ~~~~~L~~~~~~~~~-----l~~~~~~~i~~qi~~~l~~lH~--~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~  150 (329)
T cd05618          78 VNGGDLMFHMQRQRK-----LPEEHARFYSAEISLALNYLHE--RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG  150 (329)
T ss_pred             CCCCCHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC
Confidence            999999999887665     9999999999999999999999  7899999999999999999999999999975432 3


Q ss_pred             CCcceeeccceeeccCcc
Q 019481          161 NADLTALDTSSVSAQSGK  178 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~  178 (340)
                      ......+||+.|+||+..
T Consensus       151 ~~~~~~~gt~~y~aPE~~  168 (329)
T cd05618         151 DTTSTFCGTPNYIAPEIL  168 (329)
T ss_pred             CccccccCCccccCHHHH
Confidence            334456788889888543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=6.4e-37  Score=273.27  Aligned_cols=184  Identities=15%  Similarity=0.082  Sum_probs=145.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|+++..........+.+|++++++++||||+++++++.       +....++++||++ 
T Consensus        15 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-------~~~~~~lv~e~~~-   86 (303)
T cd07869          15 EGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIH-------TKETLTLVFEYVH-   86 (303)
T ss_pred             ecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEe-------cCCeEEEEEECCC-
Confidence            58999999999999999999999975433334456788999999999999999999765       3447789999996 


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-CCc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-NAD  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~~~  163 (340)
                      ++|.+++.....    .+++..++.++.||+.||+|||+  ++|+||||||+|||++.++++||+|||+++..... ...
T Consensus        87 ~~l~~~~~~~~~----~~~~~~~~~~~~qi~~al~~lH~--~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~  160 (303)
T cd07869          87 TDLCQYMDKHPG----GLHPENVKLFLFQLLRGLSYIHQ--RYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTY  160 (303)
T ss_pred             cCHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccC
Confidence            688888876543    38999999999999999999999  88999999999999999999999999999765432 222


Q ss_pred             ceeeccceeeccCccccch-hh-hhHhHhCCcccccccccc
Q 019481          164 LTALDTSSVSAQSGKTGME-MK-MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~-~~-~~~~~s~g~~~~~~~~~~  202 (340)
                      ....||+.|+||+.+.+.. +. ..|+|+.|...+.+.++.
T Consensus       161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~  201 (303)
T cd07869         161 SNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGV  201 (303)
T ss_pred             CCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            3456788899987554321 11 346777666666655444

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=2e-36  Score=278.03  Aligned_cols=138  Identities=17%  Similarity=0.078  Sum_probs=122.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|++.+..  .....+.+.+|++++++++||||+++++.|.       +.+..+++|||+
T Consensus        11 ~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~-------~~~~~~lv~E~~   83 (376)
T cd05598          11 IGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQ-------DKDNLYFVMDYI   83 (376)
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEE-------cCCEEEEEEeCC
Confidence            6899999999999999999999996421  1223456789999999999999999999765       344788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      ++|+|.+++...+.     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+|..
T Consensus        84 ~~g~L~~~i~~~~~-----~~~~~~~~~~~qi~~al~~lH~--~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~  150 (376)
T cd05598          84 PGGDMMSLLIRLGI-----FEEDLARFYIAELTCAIESVHK--MGFIHRDIKPDNILIDRDGHIKLTDFGLCTG  150 (376)
T ss_pred             CCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeEeCCCCHHHEEECCCCCEEEEeCCCCcc
Confidence            99999999988665     8999999999999999999999  8899999999999999999999999999853

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=1.4e-36  Score=279.67  Aligned_cols=138  Identities=15%  Similarity=0.065  Sum_probs=122.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|++.+..  .....+.+.+|++++++++||||+++++.|.       +..+.+++|||+
T Consensus        11 ~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~-------~~~~~~lv~E~~   83 (382)
T cd05625          11 IGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQ-------DKDNLYFVMDYI   83 (382)
T ss_pred             eCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEE-------eCCEEEEEEeCC
Confidence            6899999999999999999999997522  2234567889999999999999999999775       344788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      ++|+|.+++.+.+.     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+|+.
T Consensus        84 ~gg~L~~~l~~~~~-----~~e~~~~~~~~qi~~al~~lH~--~~ivHrDlKp~NILl~~~g~~kL~DFGla~~  150 (382)
T cd05625          84 PGGDMMSLLIRMGI-----FPEDLARFYIAELTCAVESVHK--MGFIHRDIKPDNILIDRDGHIKLTDFGLCTG  150 (382)
T ss_pred             CCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEECCCCCEEEeECCCCcc
Confidence            99999999987665     8999999999999999999999  7899999999999999999999999999853

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-36  Score=275.65  Aligned_cols=240  Identities=15%  Similarity=0.092  Sum_probs=175.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|++..+++.||+|+++...  .......+.+|+++++.++||||++++++|.       +..+.+++|||
T Consensus        10 g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-------~~~~~~lv~e~   82 (350)
T cd05573          10 GRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQ-------DEEHLYLVMEY   82 (350)
T ss_pred             EeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhee-------cCCeEEEEEcC
Confidence            36899999999999999999999997522  1234566889999999999999999999665       44478899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++......
T Consensus        83 ~~~~~L~~~l~~~~~-----l~~~~~~~i~~qi~~aL~~LH~--~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~  155 (350)
T cd05573          83 MPGGDLMNLLIRKDV-----FPEETARFYIAELVLALDSVHK--LGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK  155 (350)
T ss_pred             CCCCCHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence            999999999988755     9999999999999999999999  889999999999999999999999999998765433


Q ss_pred             ------------------------------CcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCc
Q 019481          162 ------------------------------ADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSH  211 (340)
Q Consensus       162 ------------------------------~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~  211 (340)
                                                    ......||+.|+||      |+....       .  +....+.|+     
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP------E~~~~~-------~--~~~~~DiwS-----  215 (350)
T cd05573         156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAP------EVLRGT-------P--YGLECDWWS-----  215 (350)
T ss_pred             cccccccccccccccccccccccccccccccccccccCccccCH------HHHcCC-------C--CCCceeeEe-----
Confidence                                          12234577777777      433211       1  112334476     


Q ss_pred             ccccCCCccCCchhHHHHHHHHHHHHhhh---hccccccCcCCc---cccccccccCCCCchH-HHHhhcCcce
Q 019481          212 LKNTRPNLKTENETWNNFLYLLLIATLLS---TITFLSALKITG---CKSEEGYKNNSSLNPI-CQIVNQHPFY  278 (340)
Q Consensus       212 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~p~---~~~~~~l~~dP~~R~t-~~~ll~hp~~  278 (340)
                      +|++..++.+|..||..............   .......+.++.   .+...|++ ||.+|++ ++++++|||+
T Consensus       216 lG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~  288 (350)
T cd05573         216 LGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFF  288 (350)
T ss_pred             cchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCc
Confidence            77777777777776654322211111100   011111111122   22335676 9999999 9999999999

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=2e-36  Score=271.83  Aligned_cols=240  Identities=20%  Similarity=0.158  Sum_probs=174.2

Q ss_pred             CCcceEEEEEEc---CCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVPF---PDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~~---~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|+||.||++++   ..+++.||+|+++... .......+.+|++++++++||||++++++|.       +....++++|
T Consensus         6 ~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-------~~~~~~lv~e   78 (318)
T cd05582           6 QGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQ-------TEGKLYLILD   78 (318)
T ss_pred             eCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEE-------cCCEEEEEEc
Confidence            588999999876   4578999999997522 2233456788999999999999999999765       3447789999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      |+++|+|.+++.+...     +++..+..++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+++.....
T Consensus        79 ~~~~~~L~~~l~~~~~-----l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~  151 (318)
T cd05582          79 FLRGGDLFTRLSKEVM-----FTEEDVKFYLAELALALDHLHS--LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH  151 (318)
T ss_pred             CCCCCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC
Confidence            9999999999987655     9999999999999999999999  77999999999999999999999999999865443


Q ss_pred             -CCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          161 -NADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       161 -~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                       ......+||+.|++|+...+.+.               ....+.|+     .|++..++.+|..||.......... .+
T Consensus       152 ~~~~~~~~g~~~y~aPE~~~~~~~---------------~~~~Diws-----lG~il~el~tg~~p~~~~~~~~~~~-~i  210 (318)
T cd05582         152 EKKAYSFCGTVEYMAPEVVNRRGH---------------TQSADWWS-----FGVLMFEMLTGSLPFQGKDRKETMT-MI  210 (318)
T ss_pred             CCceecccCChhhcCHHHHcCCCC---------------CCccceec-----cceEeeeeccCCCCCCCCCHHHHHH-HH
Confidence             23345578888888743322111               11234466     6666666666666654322211111 11


Q ss_pred             hhccccccCcCC---ccccccccccCCCCchH-----HHHhhcCccee
Q 019481          240 STITFLSALKIT---GCKSEEGYKNNSSLNPI-----CQIVNQHPFYI  279 (340)
Q Consensus       240 ~~~~~~~~~~~p---~~~~~~~l~~dP~~R~t-----~~~ll~hp~~~  279 (340)
                      .......+..++   ..+...||+.||.+||+     ++++++|||+.
T Consensus       211 ~~~~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~  258 (318)
T cd05582         211 LKAKLGMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFS  258 (318)
T ss_pred             HcCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcC
Confidence            111111111122   12344789999999999     67799999993

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.3e-36  Score=275.38  Aligned_cols=189  Identities=16%  Similarity=0.119  Sum_probs=146.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|++..+++.||+|.++.. ........+.+|++++++++||||+++++++....  ..+....++++||+
T Consensus         9 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~~~~~~lv~e~~   86 (338)
T cd07859           9 GKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPS--RREFKDIYVVFELM   86 (338)
T ss_pred             eecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccC--CCCCceEEEEEecC
Confidence            3588999999999999999999998742 22234456889999999999999999999764321  11223578999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      . ++|.+.+.....     +++..+..++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+++.......
T Consensus        87 ~-~~L~~~l~~~~~-----~~~~~~~~i~~qi~~aL~~LH~--~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~  158 (338)
T cd07859          87 E-SDLHQVIKANDD-----LTPEHHQFFLYQLLRALKYIHT--ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP  158 (338)
T ss_pred             C-CCHHHHHHhccc-----CCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHeEECCCCcEEEccCccccccccccC
Confidence            5 699999987665     9999999999999999999999  7899999999999999999999999999986533221


Q ss_pred             c----ceeeccceeeccCcccc---chhhhhHhHhCCcccccccccc
Q 019481          163 D----LTALDTSSVSAQSGKTG---MEMKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 ~----~~~~gt~~~~~p~~~~~---~~~~~~~~~s~g~~~~~~~~~~  202 (340)
                      .    ....||+.|+|||...+   .--...|+|+.|...+.+.++.
T Consensus       159 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~  205 (338)
T cd07859         159 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK  205 (338)
T ss_pred             ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCC
Confidence            1    23468888888864332   1111347777777766665544

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=7e-37  Score=275.40  Aligned_cols=240  Identities=16%  Similarity=0.088  Sum_probs=171.6

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHH-HhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLD-SLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~-~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||+||+|++..+++.||+|++....  .....+.+.+|.. +++.++||||++++++|.       +....+++||
T Consensus         4 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~-------~~~~~~lv~e   76 (323)
T cd05575           4 GKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQ-------TADKLYFVLD   76 (323)
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEE-------eCCEEEEEEc
Confidence            35899999999999999999999997521  1222344555655 467899999999999665       3447789999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc-
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-  159 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-  159 (340)
                      |+++|+|.+++.....     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.... 
T Consensus        77 ~~~~g~L~~~l~~~~~-----~~~~~~~~~~~qi~~~l~~lH~--~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~  149 (323)
T cd05575          77 YVNGGELFFHLQRERS-----FPEPRARFYAAEIASALGYLHS--LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH  149 (323)
T ss_pred             CCCCCCHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC
Confidence            9999999999987665     9999999999999999999999  8899999999999999999999999999976433 


Q ss_pred             cCCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          160 ENADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      .......+||+.|++|+.+.+..+             .  ...+.|+     +|++..++.+|..||.......... .+
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~~~-------------~--~~~Dvws-----lG~il~ell~g~~pf~~~~~~~~~~-~i  208 (323)
T cd05575         150 SKTTSTFCGTPEYLAPEVLRKQPY-------------D--RTVDWWC-----LGAVLYEMLYGLPPFYSRDTAEMYD-NI  208 (323)
T ss_pred             CCccccccCChhhcChhhhcCCCC-------------C--ccccccc-----cchhhhhhhcCCCCCCCCCHHHHHH-HH
Confidence            233345678888888854332211             1  1233466     6666666666666654321110000 00


Q ss_pred             hhccccccCcCCc---cccccccccCCCCchHH----HHhhcCcce
Q 019481          240 STITFLSALKITG---CKSEEGYKNNSSLNPIC----QIVNQHPFY  278 (340)
Q Consensus       240 ~~~~~~~~~~~p~---~~~~~~l~~dP~~R~t~----~~ll~hp~~  278 (340)
                      ........+.++.   ++...||++||.+||++    .++++|||+
T Consensus       209 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~  254 (323)
T cd05575         209 LNKPLRLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFF  254 (323)
T ss_pred             HcCCCCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCc
Confidence            0111111122222   23447799999999997    599999999

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=4.4e-37  Score=275.79  Aligned_cols=236  Identities=14%  Similarity=0.101  Sum_probs=169.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.||+|+++.+++.||+|+++...  .....+....|..++... +||||++++++|.       +.++.+++||
T Consensus         4 g~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-------~~~~~~lv~E   76 (316)
T cd05620           4 GKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQ-------TKEHLFFVME   76 (316)
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEE-------eCCEEEEEEC
Confidence            36899999999999999999999997522  122345567788888764 8999999999765       3447889999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc-
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-  159 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-  159 (340)
                      |+++|+|.+++.....     +++..+..++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+++.... 
T Consensus        77 ~~~~g~L~~~i~~~~~-----~~~~~~~~~~~qi~~~l~~lH~--~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  149 (316)
T cd05620          77 FLNGGDLMFHIQDKGR-----FDLYRATFYAAEIVCGLQFLHS--KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG  149 (316)
T ss_pred             CCCCCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHeEECCCCCEEeCccCCCeecccC
Confidence            9999999999987655     8999999999999999999999  8899999999999999999999999999975432 


Q ss_pred             cCCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHh
Q 019481          160 ENADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATL  238 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (340)
                      .....+.+||+.|+|||.+.+..+. ..|+                |+     +|++..++.+|..||.......... .
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di----------------ws-----lGvil~el~~g~~Pf~~~~~~~~~~-~  207 (316)
T cd05620         150 DNRASTFCGTPDYIAPEILQGLKYTFSVDW----------------WS-----FGVLLYEMLIGQSPFHGDDEDELFE-S  207 (316)
T ss_pred             CCceeccCCCcCccCHHHHcCCCCCcccch----------------hh-----hHHHHHHHHhCCCCCCCCCHHHHHH-H
Confidence            2333456788888888543322211 1234                44     4444444444444432211110000 0


Q ss_pred             hhhccccccCcCCcc-------ccccccccCCCCchHH-HHhhcCccee
Q 019481          239 LSTITFLSALKITGC-------KSEEGYKNNSSLNPIC-QIVNQHPFYI  279 (340)
Q Consensus       239 ~~~~~~~~~~~~p~~-------~~~~~l~~dP~~R~t~-~~ll~hp~~~  279 (340)
                      +    ....+..|..       +...||++||++|+++ +++++|||+.
T Consensus       208 ~----~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~  252 (316)
T cd05620         208 I----RVDTPHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFK  252 (316)
T ss_pred             H----HhCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcC
Confidence            0    0111223332       3447899999999996 5899999993

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=2.1e-36  Score=273.38  Aligned_cols=183  Identities=19%  Similarity=0.109  Sum_probs=147.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|.+..+++.+|+|++.........+.+.+|++++++++||||++++++|..       .+..+++|||++
T Consensus        14 g~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~~~lv~e~~~   86 (333)
T cd06650          14 GAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-------DGEISICMEHMD   86 (333)
T ss_pred             cCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEE-------CCEEEEEEecCC
Confidence            4689999999999999999999999765444556778999999999999999999997753       347789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCC-ceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEK-QVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~-~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      +|+|.+++...+.     +++..+..++.|++.||.|||+  + +|+||||||+|||++.++.+||+|||++...... .
T Consensus        87 ~~~L~~~l~~~~~-----~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-~  158 (333)
T cd06650          87 GGSLDQVLKKAGR-----IPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-M  158 (333)
T ss_pred             CCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh-c
Confidence            9999999987665     8999999999999999999997  4 5999999999999999999999999999765432 2


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccc
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEK  201 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~  201 (340)
                      .....||..|++||...+.... ..|+|+.|...+.+..+
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g  198 (333)
T cd06650         159 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIG  198 (333)
T ss_pred             cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHC
Confidence            2345688889999754332221 23566655555554433

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-36  Score=234.02  Aligned_cols=246  Identities=16%  Similarity=0.144  Sum_probs=170.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCch-hhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPL-QLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|.||+|++|++.++++.||+|.++..++. .......+|+.+|+.++|.|||++++..       -.+....+|+|||.
T Consensus        12 egtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvl-------hsdkkltlvfe~cd   84 (292)
T KOG0662|consen   12 EGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL-------HSDKKLTLVFEFCD   84 (292)
T ss_pred             CCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhh-------ccCceeEEeHHHhh
Confidence            589999999999999999999999874433 3346678999999999999999999943       34446779999997


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      . +|..+....+.    .++.+.++.++.|+++||.|+|+  ++++||||||+|.|++.+|++|++|||+|+.+.-....
T Consensus        85 q-dlkkyfdslng----~~d~~~~rsfmlqllrgl~fchs--hnvlhrdlkpqnllin~ngelkladfglarafgipvrc  157 (292)
T KOG0662|consen   85 Q-DLKKYFDSLNG----DLDPEIVRSFMLQLLRGLGFCHS--HNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRC  157 (292)
T ss_pred             H-HHHHHHHhcCC----cCCHHHHHHHHHHHHhhhhhhhh--hhhhhccCCcceEEeccCCcEEecccchhhhcCCceEe
Confidence            5 99999887665    39999999999999999999999  88999999999999999999999999999976543321


Q ss_pred             -ceeeccceeecc------------CccccchhhhhHhHhCCcccccc---------------ccccccCCCCCCccccc
Q 019481          164 -LTALDTSSVSAQ------------SGKTGMEMKMAQLESGGWRAHDE---------------AEKAFQWPYKSSHLKNT  215 (340)
Q Consensus       164 -~~~~gt~~~~~p------------~~~~~~~~~~~~~~s~g~~~~~~---------------~~~~~~~~~~~~~~~~~  215 (340)
                       ....-|..|.+|            .++|+.+++.+++-..|++.+.-               ....+.||.-.......
T Consensus       158 ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk  237 (292)
T KOG0662|consen  158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYK  237 (292)
T ss_pred             eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCc
Confidence             122335555555            45556666666555555554321               01112344111111000


Q ss_pred             CCCccCCchhHHHHHHHHHHHHhhhhccccccCcCCccccccccccCCCCchHHHHhhcCcce
Q 019481          216 RPNLKTENETWNNFLYLLLIATLLSTITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       216 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ..-+--....|.+....+..              --.++.++.|.-+|.+|.+|+..++|||+
T Consensus       238 ~yp~ypattswsqivp~lns--------------~grdllqkll~cnp~qrisaeaalqhpyf  286 (292)
T KOG0662|consen  238 PYPIYPATTSWSQIVPKLNS--------------TGRDLLQKLLKCNPAQRISAEAALQHPYF  286 (292)
T ss_pred             ccCCccccchHHHHhhhhcc--------------hhHHHHHHHhccCcccccCHHHHhcCccc
Confidence            00000011112221111000              01234456688899999999999999999

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.4e-38  Score=273.23  Aligned_cols=241  Identities=16%  Similarity=0.091  Sum_probs=201.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc--CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI--TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .||||.||-++.+.||+.+|+|.++++  +..+.....++|-++|++++.+.||.+-..|++.       +...+|+..|
T Consensus       195 kGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTk-------d~LClVLtlM  267 (591)
T KOG0986|consen  195 KGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETK-------DALCLVLTLM  267 (591)
T ss_pred             cccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCC-------CceEEEEEee
Confidence            689999999999999999999998862  2234456678999999999999999998877754       3566899999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      .||+|.-+|.+.+.   ..+++..++.|+.+|+.||++||+  .+||+|||||+|||+|+.|+++|+|+|+|..+.++++
T Consensus       268 NGGDLkfHiyn~g~---~gF~e~ra~FYAAEi~cGLehlH~--~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~  342 (591)
T KOG0986|consen  268 NGGDLKFHIYNHGN---PGFDEQRARFYAAEIICGLEHLHR--RRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKP  342 (591)
T ss_pred             cCCceeEEeeccCC---CCCchHHHHHHHHHHHhhHHHHHh--cceeeccCChhheeeccCCCeEeeccceEEecCCCCc
Confidence            99999999998875   569999999999999999999999  8899999999999999999999999999999999988


Q ss_pred             cceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhc
Q 019481          163 DLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTI  242 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  242 (340)
                      ....+||..||||      |++..+.       |++..+.  |+     +||+..+|..|..||.+.-...... -+.+.
T Consensus       343 ~~~rvGT~GYMAP------Evl~ne~-------Y~~s~Dw--f~-----lGCllYemi~G~sPFr~~KeKvk~e-Evdrr  401 (591)
T KOG0986|consen  343 IRGRVGTVGYMAP------EVLQNEV-------YDFSPDW--FS-----LGCLLYEMIAGHSPFRQRKEKVKRE-EVDRR  401 (591)
T ss_pred             cccccCcccccCH------HHHcCCc-------ccCCccH--HH-----HHhHHHHHHcccCchhhhhhhhhHH-HHHHH
Confidence            8888999999999      6654332       3333444  77     9999999999999998866654433 23445


Q ss_pred             cccccCcCCccccccc-------cccCCCCchH-----HHHhhcCcce
Q 019481          243 TFLSALKITGCKSEEG-------YKNNSSLNPI-----CQIVNQHPFY  278 (340)
Q Consensus       243 ~~~~~~~~p~~~~~~~-------l~~dP~~R~t-----~~~ll~hp~~  278 (340)
                      +...+...|..+|+++       |++||++|.-     ++++.+|||+
T Consensus       402 ~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfF  449 (591)
T KOG0986|consen  402 TLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFF  449 (591)
T ss_pred             HhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCccc
Confidence            5555666667777754       9999999965     5699999999

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-36  Score=277.13  Aligned_cols=237  Identities=15%  Similarity=0.111  Sum_probs=171.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|++..+++.||+|++....  .......+.+|+++++.++||||++++++|.       +..+.+++|||
T Consensus        10 G~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~-------~~~~~~lv~E~   82 (364)
T cd05599          10 GRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQ-------DENYLYLIMEY   82 (364)
T ss_pred             EecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE-------cCCeEEEEECC
Confidence            36899999999999999999999997521  2233456788999999999999999999775       34478899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.+....
T Consensus        83 ~~~g~L~~~l~~~~~-----l~~~~~~~~~~qi~~aL~~lH~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  155 (364)
T cd05599          83 LPGGDMMTLLMKKDT-----FTEEETRFYIAETILAIDSIHK--LGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH  155 (364)
T ss_pred             CCCcHHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence            999999999987665     9999999999999999999999  889999999999999999999999999997653221


Q ss_pred             C---------------------------------------cceeeccceeeccCccccchhhhhHhHhCCcccccccccc
Q 019481          162 A---------------------------------------DLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       162 ~---------------------------------------~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~  202 (340)
                      .                                       ..+.+||+.|+||      |+....       .+  ....
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP------E~~~~~-------~~--~~~~  220 (364)
T cd05599         156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAP------EVFLQT-------GY--NKEC  220 (364)
T ss_pred             cccccccccccccccccccccccccccccccchhhcccccccccccCccccCH------HHHcCC-------CC--CCee
Confidence            1                                       1123577777777      433110       11  1233


Q ss_pred             ccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhccccccCcCCcc--c-------cccccccCCCCchH---HH
Q 019481          203 FQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTITFLSALKITGC--K-------SEEGYKNNSSLNPI---CQ  270 (340)
Q Consensus       203 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~-------~~~~l~~dP~~R~t---~~  270 (340)
                      +.|+     +|++..++.+|..||............   .........|..  +       ...++. ||.+|++   ++
T Consensus       221 DiwS-----lG~il~el~~G~~Pf~~~~~~~~~~~i---~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~  291 (364)
T cd05599         221 DWWS-----LGVIMYEMLVGYPPFCSDNPQETYRKI---INWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVN  291 (364)
T ss_pred             eeec-----chhHHHHhhcCCCCCCCCCHHHHHHHH---HcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHH
Confidence            4466     677777777766666442222111101   111111111111  1       223454 8999998   99


Q ss_pred             HhhcCcce
Q 019481          271 IVNQHPFY  278 (340)
Q Consensus       271 ~ll~hp~~  278 (340)
                      ++++|||+
T Consensus       292 ~ll~h~~~  299 (364)
T cd05599         292 EIKSHPFF  299 (364)
T ss_pred             HHhcCCCc
Confidence            99999999

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.5e-36  Score=277.50  Aligned_cols=138  Identities=19%  Similarity=0.111  Sum_probs=122.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|++.+..  .....+.+.+|++++++++||||++++++|.       +..+.+++|||+
T Consensus        11 ~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~-------~~~~~~lv~E~~   83 (377)
T cd05629          11 KGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQ-------DAQYLYLIMEFL   83 (377)
T ss_pred             ecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEE-------cCCeeEEEEeCC
Confidence            6889999999999999999999986421  2234566889999999999999999999775       344788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      ++|+|.+++.....     +++..++.++.|++.||+|||+  .+|+||||||+|||++.++.+||+|||+|+.
T Consensus        84 ~gg~L~~~l~~~~~-----~~~~~~~~~~~ql~~aL~~LH~--~givHrDlkp~NIll~~~~~~kl~DfGla~~  150 (377)
T cd05629          84 PGGDLMTMLIKYDT-----FSEDVTRFYMAECVLAIEAVHK--LGFIHRDIKPDNILIDRGGHIKLSDFGLSTG  150 (377)
T ss_pred             CCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHEEECCCCCEEEeecccccc
Confidence            99999999987665     9999999999999999999999  7799999999999999999999999999964

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=8.6e-37  Score=274.20  Aligned_cols=235  Identities=14%  Similarity=0.088  Sum_probs=169.9

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.||+|++..+++.||+|++++..  .......+.+|.++++.+ +||||++++++|.       +....+++||
T Consensus         4 G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~-------~~~~~~lv~e   76 (318)
T cd05570           4 GKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQ-------TKDRLFFVME   76 (318)
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEE-------cCCEEEEEEc
Confidence            36889999999999999999999997522  223345677899999888 6999999999765       3447889999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc-
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-  159 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-  159 (340)
                      |+++|+|.+++.....     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.... 
T Consensus        77 ~~~~~~L~~~~~~~~~-----l~~~~~~~~~~qi~~~l~~LH~--~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~  149 (318)
T cd05570          77 YVNGGDLMFHIQRSGR-----FDEPRARFYAAEIVLGLQFLHE--RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG  149 (318)
T ss_pred             CCCCCCHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCeEccCCCHHHeEECCCCcEEecccCCCeecCcC
Confidence            9999999999987765     9999999999999999999999  8899999999999999999999999999975332 


Q ss_pred             cCCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHh
Q 019481          160 ENADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATL  238 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (340)
                      .......+||+.|++|+.+.+..+. ..|+|+.|+..                     .++.+|..||............
T Consensus       150 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil---------------------~~l~~G~~pf~~~~~~~~~~~i  208 (318)
T cd05570         150 GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLL---------------------YEMLAGQSPFEGDDEDELFQSI  208 (318)
T ss_pred             CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHH---------------------HHHhhCCCCCCCCCHHHHHHHH
Confidence            2333455788888888543322111 12444444444                     3333333333221111000000


Q ss_pred             hhhccccccCcCCc-------cccccccccCCCCchHH-----HHhhcCcce
Q 019481          239 LSTITFLSALKITG-------CKSEEGYKNNSSLNPIC-----QIVNQHPFY  278 (340)
Q Consensus       239 ~~~~~~~~~~~~p~-------~~~~~~l~~dP~~R~t~-----~~ll~hp~~  278 (340)
                       .    ...+..|.       ++...||++||.+||++     +++++|||+
T Consensus       209 -~----~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~  255 (318)
T cd05570         209 -L----EDEVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFF  255 (318)
T ss_pred             -H----cCCCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCc
Confidence             0    01111222       33457899999999999     999999999

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=8.5e-37  Score=273.97  Aligned_cols=236  Identities=16%  Similarity=0.098  Sum_probs=168.4

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||+|++..+++.||+|+++...  .....+....|..++..+ +||||++++++|.       +..+.+++|||
T Consensus         5 ~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~-------~~~~~~lv~e~   77 (316)
T cd05592           5 KGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQ-------TKEHLFFVMEY   77 (316)
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEE-------cCCEEEEEEcC
Confidence            6899999999999999999999997522  123344556777777654 7999999999765       34478899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc-c
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-E  160 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-~  160 (340)
                      ++||+|.+++.....     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.... .
T Consensus        78 ~~gg~L~~~~~~~~~-----~~~~~~~~~~~qi~~al~~LH~--~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~  150 (316)
T cd05592          78 LNGGDLMFHIQSSGR-----FDEARARFYAAEIICGLQFLHK--KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE  150 (316)
T ss_pred             CCCCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC
Confidence            999999999987665     9999999999999999999999  8899999999999999999999999999986543 2


Q ss_pred             CCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      ......+||+.|++|+.+.+..+.               ...+.|+     +|++..++.+|..||............  
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~---------------~~~Dvws-----lG~il~ell~G~~Pf~~~~~~~~~~~i--  208 (316)
T cd05592         151 GKASTFCGTPDYIAPEILKGQKYN---------------ESVDWWS-----FGVLLYEMLIGQSPFHGEDEDELFDSI--  208 (316)
T ss_pred             CccccccCCccccCHHHHcCCCCC---------------Ccccchh-----HHHHHHHHHhCCCCCCCCCHHHHHHHH--
Confidence            333456788888888533221111               1122344     444444444444444321111100100  


Q ss_pred             hccccccCcCCc-------cccccccccCCCCchHH-HHhhcCccee
Q 019481          241 TITFLSALKITG-------CKSEEGYKNNSSLNPIC-QIVNQHPFYI  279 (340)
Q Consensus       241 ~~~~~~~~~~p~-------~~~~~~l~~dP~~R~t~-~~ll~hp~~~  279 (340)
                         ....+.+|.       ++...||++||++|+++ +++++|||+.
T Consensus       209 ---~~~~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~  252 (316)
T cd05592         209 ---LNDRPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFR  252 (316)
T ss_pred             ---HcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccC
Confidence               011222222       23347799999999985 5899999993

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=2.8e-36  Score=276.20  Aligned_cols=244  Identities=15%  Similarity=0.078  Sum_probs=173.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|++++..  .....+.+.+|+.+++.++||||++++++|.       +..+.+++|||+
T Consensus        53 ~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~-------~~~~~~lv~Ey~  125 (370)
T cd05596          53 RGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQ-------DDKYLYMVMEYM  125 (370)
T ss_pred             eCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEe-------cCCEEEEEEcCC
Confidence            6899999999999999999999997421  1223455778999999999999999998665       444788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-  161 (340)
                      +||+|.+++... .     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++...... 
T Consensus       126 ~gg~L~~~l~~~-~-----l~~~~~~~~~~qi~~aL~~LH~--~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~  197 (370)
T cd05596         126 PGGDLVNLMSNY-D-----IPEKWARFYTAEVVLALDAIHS--MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGM  197 (370)
T ss_pred             CCCcHHHHHHhc-C-----CCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCc
Confidence            999999998753 2     8899999999999999999999  889999999999999999999999999998765432 


Q ss_pred             -CcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          162 -ADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       162 -~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                       ...+.+||+.|+||+.+.+...           ...+....+.|+     +|++..++.+|..||..............
T Consensus       198 ~~~~~~~gt~~y~aPE~~~~~~~-----------~~~~~~~~DiwS-----lGvilyelltG~~Pf~~~~~~~~~~~i~~  261 (370)
T cd05596         198 VRCDTAVGTPDYISPEVLKSQGG-----------DGYYGRECDWWS-----VGVFLYEMLVGDTPFYADSLVGTYSKIMD  261 (370)
T ss_pred             ccCCCCCCCcCeECHHHhccCCC-----------CCCCCCceeeee-----hhHHHHHHHhCCCCcCCCCHHHHHHHHHc
Confidence             2235678998998854322110           000111223355     55555555555555543222111111100


Q ss_pred             ---hccccccCcCCc---cccccccccCCCC--chHHHHhhcCccee
Q 019481          241 ---TITFLSALKITG---CKSEEGYKNNSSL--NPICQIVNQHPFYI  279 (340)
Q Consensus       241 ---~~~~~~~~~~p~---~~~~~~l~~dP~~--R~t~~~ll~hp~~~  279 (340)
                         ...+...+.++.   ++...+|+.+|.+  |++++++++|||+.
T Consensus       262 ~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~  308 (370)
T cd05596         262 HKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFK  308 (370)
T ss_pred             CCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccC
Confidence               111111111221   2234668888987  99999999999993

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.6e-37  Score=257.65  Aligned_cols=181  Identities=16%  Similarity=0.096  Sum_probs=159.1

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|.||.|-+++.+.+++.+|+|++++..  .......-+.|-++|+.++||.+..|..+|+++.       ..+.||||
T Consensus       177 GkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~d-------rlCFVMey  249 (516)
T KOG0690|consen  177 GKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQD-------RLCFVMEY  249 (516)
T ss_pred             cCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCc-------eEEEEEEE
Confidence            36999999999999999999999998632  2233445678999999999999999999887543       45589999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee-eccc
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV-SAVE  160 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~-~~~~  160 (340)
                      ..||.|+-++.+...     ++|..++.+-.+|+.||.|||+  ++|+.||||.+|.|+|.+|++||+|||+++. +..+
T Consensus       250 anGGeLf~HLsrer~-----FsE~RtRFYGaEIvsAL~YLHs--~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g  322 (516)
T KOG0690|consen  250 ANGGELFFHLSRERV-----FSEDRTRFYGAEIVSALGYLHS--RNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYG  322 (516)
T ss_pred             ccCceEeeehhhhhc-----ccchhhhhhhHHHHHHhhhhhh--CCeeeeechhhhheeccCCceEeeecccchhccccc
Confidence            999999999998765     9999999999999999999999  8899999999999999999999999999985 4557


Q ss_pred             CCcceeeccceeeccC-----------ccccchhhhhHhHhCCcccccc
Q 019481          161 NADLTALDTSSVSAQS-----------GKTGMEMKMAQLESGGWRAHDE  198 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~-----------~~~~~~~~~~~~~s~g~~~~~~  198 (340)
                      ....++||||.|.||+           ++||.|++|+++.||..++|..
T Consensus       323 ~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~  371 (516)
T KOG0690|consen  323 DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK  371 (516)
T ss_pred             ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccccc
Confidence            7788999999999995           7899999999999987777543

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=8.9e-37  Score=274.86  Aligned_cols=238  Identities=12%  Similarity=0.041  Sum_probs=166.4

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHh---hhcCCCccccccccccccccccCCcceeeeee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSL---EEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l---~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      .|+||.||+|.+..+++.||+|++++..  .....+.+.+|++++   ++++||||++++++|.       +....+++|
T Consensus         9 ~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~-------~~~~~~lv~   81 (324)
T cd05589           9 RGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQ-------TEDHVCFVM   81 (324)
T ss_pred             ecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEE-------cCCEEEEEE
Confidence            6899999999999999999999997522  122345566676654   5678999999999775       334788999


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      ||+++|+|...+... .     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++....
T Consensus        82 E~~~~~~L~~~~~~~-~-----l~~~~~~~~~~qi~~al~~lH~--~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~  153 (324)
T cd05589          82 EYAAGGDLMMHIHTD-V-----FSEPRAVFYAACVVLGLQYLHE--NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG  153 (324)
T ss_pred             cCCCCCcHHHHhhcC-C-----CCHHHHHHHHHHHHHHHHHHHh--CCeEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence            999999999888653 2     8999999999999999999999  8899999999999999999999999999875432


Q ss_pred             -cCCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHH
Q 019481          160 -ENADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIAT  237 (340)
Q Consensus       160 -~~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (340)
                       .....+.+||+.|+||+.+.+..+. ..|+|+.|                     ++..++.+|..||...........
T Consensus       154 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG---------------------~il~el~~G~~pf~~~~~~~~~~~  212 (324)
T cd05589         154 FGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLG---------------------VLIYEMLVGESPFPGDDEEEVFDS  212 (324)
T ss_pred             CCCcccccccCccccCHhHhcCCCCCcccchhhHH---------------------HHHHHHHhCCCCCCCCCHHHHHHH
Confidence             2334456789999998644332211 12444444                     444444444443322111100000


Q ss_pred             hhhhccccccCcCCc---cccccccccCCCCch-----HHHHhhcCccee
Q 019481          238 LLSTITFLSALKITG---CKSEEGYKNNSSLNP-----ICQIVNQHPFYI  279 (340)
Q Consensus       238 ~~~~~~~~~~~~~p~---~~~~~~l~~dP~~R~-----t~~~ll~hp~~~  279 (340)
                      . .......+..++.   .+...||++||.+||     +++++++|||+.
T Consensus       213 i-~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~  261 (324)
T cd05589         213 I-VNDEVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFR  261 (324)
T ss_pred             H-HhCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcC
Confidence            0 0000001111121   234478999999999     689999999993

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=2.5e-36  Score=267.63  Aligned_cols=166  Identities=18%  Similarity=0.137  Sum_probs=131.8

Q ss_pred             CCCcceEEEEEEcCC-CCceEEEEEeeccCc-hhhHHHHHHHHHHhhhc---CCCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPFPD-DRDDVMLKLHELITP-LQLRRDDDGKLDSLEEI---FHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~-~~~~vAiK~~~~~~~-~~~~~~~~~E~~~l~~l---~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      ..|+||.||+|++.. +++.||+|.++.... ......+.+|+++++.+   +||||+++++++....  ..+....+++
T Consensus        10 g~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~--~~~~~~~~lv   87 (290)
T cd07862          10 GEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR--TDRETKLTLV   87 (290)
T ss_pred             ccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEeccc--CCCCCcEEEE
Confidence            468999999999854 578899999875322 22234466788777766   6999999999764321  1234467899


Q ss_pred             eccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec
Q 019481           79 KWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      +||++ ++|.+++.....   ..+++..+..++.||+.||.|||+  ++|+||||||+|||++.++.+||+|||+++...
T Consensus        88 ~e~~~-~~l~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~lH~--~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  161 (290)
T cd07862          88 FEHVD-QDLTTYLDKVPE---PGVPTETIKDMMFQLLRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLARIYS  161 (290)
T ss_pred             EccCC-CCHHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeeCCCCHHHEEEcCCCCEEEccccceEecc
Confidence            99996 699999976543   348999999999999999999999  889999999999999999999999999998776


Q ss_pred             ccCCcceeeccceeeccCc
Q 019481          159 VENADLTALDTSSVSAQSG  177 (340)
Q Consensus       159 ~~~~~~~~~gt~~~~~p~~  177 (340)
                      .........||+.|+||+.
T Consensus       162 ~~~~~~~~~~~~~y~aPE~  180 (290)
T cd07862         162 FQMALTSVVVTLWYRAPEV  180 (290)
T ss_pred             CCcccccccccccccChHH
Confidence            5544556678888999863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=2.1e-36  Score=276.76  Aligned_cols=245  Identities=15%  Similarity=0.067  Sum_probs=170.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc--CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI--TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|++..+++.||+|++.+.  ......+.+.+|+.+++.++||||++++++|.       +..+.+++|||
T Consensus        52 G~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~-------~~~~~~lv~Ey  124 (370)
T cd05621          52 GRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQ-------DDKYLYMVMEY  124 (370)
T ss_pred             EecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE-------cCCEEEEEEcC
Confidence            3689999999999999999999999742  12233456788999999999999999999765       44578899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+++... .     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+|+......
T Consensus       125 ~~gg~L~~~l~~~-~-----~~~~~~~~~~~qil~aL~~LH~--~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~  196 (370)
T cd05621         125 MPGGDLVNLMSNY-D-----VPEKWAKFYTAEVVLALDAIHS--MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG  196 (370)
T ss_pred             CCCCcHHHHHHhc-C-----CCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHEEECCCCCEEEEecccceecccCC
Confidence            9999999999754 2     8999999999999999999999  889999999999999999999999999998765432


Q ss_pred             C--cceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          162 A--DLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       162 ~--~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      .  ..+.+||+.|+||+.+.+.+.         ...  +....+.|+     +|++..++.+|..||.............
T Consensus       197 ~~~~~~~~gt~~Y~aPE~~~~~~~---------~~~--~~~~~DiwS-----lG~ilyell~G~~Pf~~~~~~~~~~~i~  260 (370)
T cd05621         197 MVRCDTAVGTPDYISPEVLKSQGG---------DGY--YGRECDWWS-----VGVFLFEMLVGDTPFYADSLVGTYSKIM  260 (370)
T ss_pred             ceecccCCCCcccCCHHHHhccCC---------CCC--CCcccCEEe-----ehHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            1  235678888888853322110         000  111233355     5666666666666654322211111110


Q ss_pred             h---hccccccCcCC---ccccccccccCCC--CchHHHHhhcCccee
Q 019481          240 S---TITFLSALKIT---GCKSEEGYKNNSS--LNPICQIVNQHPFYI  279 (340)
Q Consensus       240 ~---~~~~~~~~~~p---~~~~~~~l~~dP~--~R~t~~~ll~hp~~~  279 (340)
                      .   ...+.....++   ..+...+|+.+|.  .|++++++++|||+.
T Consensus       261 ~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~  308 (370)
T cd05621         261 DHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFK  308 (370)
T ss_pred             hCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccC
Confidence            0   01111111111   1122244654443  388999999999993

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5e-36  Score=270.66  Aligned_cols=239  Identities=17%  Similarity=0.097  Sum_probs=170.1

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhc---CCCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEI---FHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l---~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      ..|+||.||+|++..+++.||+|++.+..  .........+|..++...   +||||++++++|.       +....+++
T Consensus         2 G~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~-------~~~~~~lv   74 (330)
T cd05586           2 GKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQ-------TDSDLYLV   74 (330)
T ss_pred             CCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEe-------cCCeEEEE
Confidence            36899999999999999999999997421  112234455677777665   6999999999765       33477899


Q ss_pred             eccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec
Q 019481           79 KWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      |||+++|+|.+++.....     +++..++.++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+++...
T Consensus        75 ~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~qil~al~~LH~--~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~  147 (330)
T cd05586          75 TDYMSGGELFWHLQKEGR-----FSEDRAKFYIAELVLALEHLHK--YDIVYRDLKPENILLDATGHIALCDFGLSKANL  147 (330)
T ss_pred             EcCCCCChHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeEeccCCHHHeEECCCCCEEEecCCcCcCCC
Confidence            999999999999987665     9999999999999999999999  889999999999999999999999999997643


Q ss_pred             c-cCCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHH
Q 019481          159 V-ENADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIAT  237 (340)
Q Consensus       159 ~-~~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (340)
                      . .......+||..|++||.+.+..            .+.  ...+.|+     +|++..++.+|..||.......... 
T Consensus       148 ~~~~~~~~~~gt~~y~aPE~~~~~~------------~~~--~~~Dvws-----lGvil~elltG~~Pf~~~~~~~~~~-  207 (330)
T cd05586         148 TDNKTTNTFCGTTEYLAPEVLLDEK------------GYT--KHVDFWS-----LGVLVFEMCCGWSPFYAEDTQQMYR-  207 (330)
T ss_pred             CCCCCccCccCCccccCHHHHcCCC------------CCC--Cccceec-----cccEEEEeccCCCCCCCCCHHHHHH-
Confidence            3 23344567888888885442211            011  1223355     5555566665555543211110000 


Q ss_pred             hhhhcccccc--C--cCC---ccccccccccCCCCch----HHHHhhcCccee
Q 019481          238 LLSTITFLSA--L--KIT---GCKSEEGYKNNSSLNP----ICQIVNQHPFYI  279 (340)
Q Consensus       238 ~~~~~~~~~~--~--~~p---~~~~~~~l~~dP~~R~----t~~~ll~hp~~~  279 (340)
                         .+.....  +  .++   ..+...||++||.+||    +++++++|||+.
T Consensus       208 ---~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~  257 (330)
T cd05586         208 ---NIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFA  257 (330)
T ss_pred             ---HHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCcccc
Confidence               1111111  0  111   1234578999999998    688999999993

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=9e-36  Score=268.60  Aligned_cols=161  Identities=17%  Similarity=0.148  Sum_probs=136.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.||+|++..+++.||+|++++..  .....+.+.+|..++.++ +||||++++++|.       +....+++||
T Consensus         4 G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-------~~~~~~lv~e   76 (327)
T cd05617           4 GRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQ-------TTSRLFLVIE   76 (327)
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEE-------eCCEEEEEEe
Confidence            36889999999999999999999998532  223456688999999888 5999999999765       3347889999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec-c
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA-V  159 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~-~  159 (340)
                      |+++|+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++... .
T Consensus        77 ~~~~~~L~~~~~~~~~-----l~~~~~~~~~~qi~~al~~lH~--~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~  149 (327)
T cd05617          77 YVNGGDLMFHMQRQRK-----LPEEHARFYAAEICIALNFLHE--RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP  149 (327)
T ss_pred             CCCCCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHEEEeCCCCEEEeccccceeccCC
Confidence            9999999999887665     9999999999999999999999  889999999999999999999999999997533 2


Q ss_pred             cCCcceeeccceeeccCcc
Q 019481          160 ENADLTALDTSSVSAQSGK  178 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~~~  178 (340)
                      .....+.+||+.|+||+.+
T Consensus       150 ~~~~~~~~gt~~y~aPE~~  168 (327)
T cd05617         150 GDTTSTFCGTPNYIAPEIL  168 (327)
T ss_pred             CCceecccCCcccCCHHHH
Confidence            3334456789989988643

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=1.5e-36  Score=273.08  Aligned_cols=236  Identities=17%  Similarity=0.101  Sum_probs=170.1

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHH-HhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLD-SLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~-~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.||+|++..+++.||+|++.+..  .......+.+|.. +++.++||||++++++|.       +.+..+++||
T Consensus         4 g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~-------~~~~~~lv~e   76 (321)
T cd05603           4 GKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQ-------TAEKLYFVLD   76 (321)
T ss_pred             eeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEE-------cCCEEEEEEc
Confidence            36899999999999999999999997522  1223344555654 578899999999999665       3447789999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc-
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-  159 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-  159 (340)
                      |+++|+|.+.+.....     +++..+..++.||++||+|||+  ++|+||||||+||+++.++.+||+|||+++.... 
T Consensus        77 ~~~~~~L~~~l~~~~~-----~~~~~~~~~~~qi~~~L~~lH~--~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~  149 (321)
T cd05603          77 YVNGGELFFHLQRERC-----FLEPRARFYAAEVASAIGYLHS--LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP  149 (321)
T ss_pred             CCCCCCHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC
Confidence            9999999999887655     8999999999999999999999  7899999999999999999999999999975422 


Q ss_pred             cCCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          160 ENADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      .......+||+.|++|+.+.+..             +..  ..+.|+     +|++..++.+|..||............ 
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~~-------------~~~--~~Diws-----lG~il~el~~g~~pf~~~~~~~~~~~i-  208 (321)
T cd05603         150 EETTSTFCGTPEYLAPEVLRKEP-------------YDR--TVDWWC-----LGAVLYEMLYGLPPFYSRDVSQMYDNI-  208 (321)
T ss_pred             CCccccccCCcccCCHHHhcCCC-------------CCC--cCcccc-----cchhhhhhhcCCCCCCCCCHHHHHHHH-
Confidence            22334557888888885432211             111  233466     666666666666665432111111101 


Q ss_pred             hhccccccCcCCc-------cccccccccCCCCchHH----HHhhcCcce
Q 019481          240 STITFLSALKITG-------CKSEEGYKNNSSLNPIC----QIVNQHPFY  278 (340)
Q Consensus       240 ~~~~~~~~~~~p~-------~~~~~~l~~dP~~R~t~----~~ll~hp~~  278 (340)
                          ......+|.       ++...||++||.+|+++    .++++|||+
T Consensus       209 ----~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~  254 (321)
T cd05603         209 ----LHKPLQLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFF  254 (321)
T ss_pred             ----hcCCCCCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCc
Confidence                011122222       23447799999999985    489999999

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=1.4e-36  Score=272.43  Aligned_cols=235  Identities=16%  Similarity=0.076  Sum_probs=168.4

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.||+|++..+++.||+|+++...  .....+....|..+++.. +||||++++++|.       +....+++||
T Consensus         4 G~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~-------~~~~~~lv~e   76 (316)
T cd05619           4 GKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQ-------TKENLFFVME   76 (316)
T ss_pred             eeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEE-------eCCEEEEEEe
Confidence            36899999999999999999999997532  122345567788888764 8999999999765       3347889999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc-
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-  159 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-  159 (340)
                      |+++|+|.+++.....     +++..+..++.|++.||+|||+  ++|+||||||+|||++.++.+||+|||+++.... 
T Consensus        77 y~~~g~L~~~l~~~~~-----~~~~~~~~~~~qi~~al~~LH~--~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~  149 (316)
T cd05619          77 YLNGGDLMFHIQSCHK-----FDLPRATFYAAEIICGLQFLHS--KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG  149 (316)
T ss_pred             CCCCCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC
Confidence            9999999999987655     8999999999999999999999  8899999999999999999999999999975432 


Q ss_pred             cCCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHh
Q 019481          160 ENADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATL  238 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (340)
                      .......+||+.|+||+...+..+. ..|+|+                     .|++..++.+|..||.......... .
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws---------------------lG~il~el~~G~~pf~~~~~~~~~~-~  207 (316)
T cd05619         150 DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWS---------------------FGVLLYEMLIGQSPFHGHDEEELFQ-S  207 (316)
T ss_pred             CCceeeecCCccccCHHHHcCCCCCchhhhhh---------------------HHHHHHHHHhCCCCCCCCCHHHHHH-H
Confidence            2233456788888888543221111 123444                     4444444444444432211110000 0


Q ss_pred             hhhccccccCcCCc-------cccccccccCCCCchHHH-HhhcCcce
Q 019481          239 LSTITFLSALKITG-------CKSEEGYKNNSSLNPICQ-IVNQHPFY  278 (340)
Q Consensus       239 ~~~~~~~~~~~~p~-------~~~~~~l~~dP~~R~t~~-~ll~hp~~  278 (340)
                         +.. ..+..|.       ++...||++||.+|+++. ++++|||+
T Consensus       208 ---i~~-~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~  251 (316)
T cd05619         208 ---IRM-DNPCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFF  251 (316)
T ss_pred             ---HHh-CCCCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCccc
Confidence               000 1122222       334477999999999986 99999999

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=4.7e-36  Score=264.70  Aligned_cols=247  Identities=13%  Similarity=0.054  Sum_probs=169.1

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||+||++.+..+++.||+|.+....  .....+.+..|++++++++||||+++.++|.       +....+++|||
T Consensus         2 g~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-------~~~~~~lv~e~   74 (280)
T cd05608           2 GKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQ-------TKTDLCLVMTI   74 (280)
T ss_pred             CCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEc-------CCCeEEEEEeC
Confidence            36899999999999999999999987422  1223456788999999999999999998665       33467899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+.+..... ....+++..++.++.||+.||+|||+  ++|+||||||+||+++.++.+||+|||+++.+....
T Consensus        75 ~~~g~L~~~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~  151 (280)
T cd05608          75 MNGGDLRYHIYNVDE-ENPGFPEPRACFYTAQIISGLEHLHQ--RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ  151 (280)
T ss_pred             CCCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC
Confidence            999999988754221 01348999999999999999999999  889999999999999999999999999998765533


Q ss_pred             C-cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          162 A-DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       162 ~-~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      . .....||+.|++|+.+.+..+. ..|+|+.|...+.+.++..+|.......               .....   ...+
T Consensus       152 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~---------------~~~~~---~~~~  213 (280)
T cd05608         152 SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV---------------ENKEL---KQRI  213 (280)
T ss_pred             ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch---------------hHHHH---HHhh
Confidence            2 2345688888888644332211 2345554444444433332222100000               00000   0000


Q ss_pred             hhccccccCcCC---ccccccccccCCCCch-----HHHHhhcCcce
Q 019481          240 STITFLSALKIT---GCKSEEGYKNNSSLNP-----ICQIVNQHPFY  278 (340)
Q Consensus       240 ~~~~~~~~~~~p---~~~~~~~l~~dP~~R~-----t~~~ll~hp~~  278 (340)
                      ...........+   ..+-..||+.||++|+     +++++++|||+
T Consensus       214 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~  260 (280)
T cd05608         214 LNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLF  260 (280)
T ss_pred             cccCCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhh
Confidence            000000001111   1233467999999999     88999999999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=7.6e-36  Score=272.63  Aligned_cols=238  Identities=16%  Similarity=0.130  Sum_probs=171.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|++..+++.||+|+++...  .......+.+|++++.+++||||++++++|.       +....+++|||
T Consensus        10 G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~-------~~~~~~lv~E~   82 (360)
T cd05627          10 GRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQ-------DKRNLYLIMEF   82 (360)
T ss_pred             eeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE-------cCCEEEEEEeC
Confidence            36889999999999999999999997421  2234566888999999999999999999765       44478899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      ++||+|.+++.+...     +++..++.++.|++.||+|||+  ++|+||||||+|||++.++++||+|||+++.+....
T Consensus        83 ~~gg~L~~~l~~~~~-----l~~~~~~~~~~qi~~~L~~lH~--~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~  155 (360)
T cd05627          83 LPGGDMMTLLMKKDT-----LSEEATQFYIAETVLAIDAIHQ--LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH  155 (360)
T ss_pred             CCCccHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence            999999999987665     9999999999999999999999  889999999999999999999999999987543211


Q ss_pred             C------------------------------------cceeeccceeeccCccccchhhhhHhHhCCccccccccccccC
Q 019481          162 A------------------------------------DLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQW  205 (340)
Q Consensus       162 ~------------------------------------~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~  205 (340)
                      .                                    ..+.+||+.|+||      |++...    +   +  ....+.|
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP------E~~~~~----~---~--~~~~Diw  220 (360)
T cd05627         156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAP------EVFMQT----G---Y--NKLCDWW  220 (360)
T ss_pred             ccccccccccCCcccccccccccccccccccccccccccccCCCccccCH------HHHcCC----C---C--CCcceec
Confidence            0                                    1134577777777      443211    1   1  1233447


Q ss_pred             CCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhccccccCcCCcc--ccccc------cccCCCCchH---HHHhhc
Q 019481          206 PYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTITFLSALKITGC--KSEEG------YKNNSSLNPI---CQIVNQ  274 (340)
Q Consensus       206 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~------l~~dP~~R~t---~~~ll~  274 (340)
                      +     +|++..++.+|..||............   .........|..  +++++      +..||.+|++   ++++++
T Consensus       221 S-----lGvilyel~tG~~Pf~~~~~~~~~~~i---~~~~~~~~~p~~~~~s~~~~~li~~l~~~p~~R~~~~~~~ei~~  292 (360)
T cd05627         221 S-----LGVIMYEMLIGYPPFCSETPQETYRKV---MNWKETLVFPPEVPISEKAKDLILRFCTDSENRIGSNGVEEIKS  292 (360)
T ss_pred             c-----ccceeeecccCCCCCCCCCHHHHHHHH---HcCCCceecCCCCCCCHHHHHHHHHhccChhhcCCCCCHHHHhc
Confidence            7     777777777777776543222111111   111111111111  12211      3358999985   789999


Q ss_pred             Ccce
Q 019481          275 HPFY  278 (340)
Q Consensus       275 hp~~  278 (340)
                      |||+
T Consensus       293 hp~f  296 (360)
T cd05627         293 HPFF  296 (360)
T ss_pred             CCCC
Confidence            9999

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=6.2e-36  Score=270.32  Aligned_cols=237  Identities=15%  Similarity=0.085  Sum_probs=170.0

Q ss_pred             CCCcceEEEEEEcC---CCCceEEEEEeeccC---chhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceee
Q 019481            4 SAPSFSVLIHVPFP---DDRDDVMLKLHELIT---PLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCW   76 (340)
Q Consensus         4 ~~G~fg~V~~~~~~---~~~~~vAiK~~~~~~---~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~   76 (340)
                      ..|+||.||++++.   .+++.||+|++.+..   .....+.+.+|++++++++ ||||++++++|.       +....+
T Consensus         9 g~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~-------~~~~~~   81 (332)
T cd05614           9 GTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQ-------TEAKLH   81 (332)
T ss_pred             eecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEe-------cCCEEE
Confidence            36899999998864   578899999997421   2233456788999999995 999999998665       344778


Q ss_pred             eeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481           77 KNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus        77 ~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      ++|||+++|+|.+++.....     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.
T Consensus        82 lv~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~qi~~~l~~lH~--~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~  154 (332)
T cd05614          82 LILDYVSGGEMFTHLYQRDN-----FSEDEVRFYSGEIILALEHLHK--LGIVYRDIKLENILLDSEGHVVLTDFGLSKE  154 (332)
T ss_pred             EEEeCCCCCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCcEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence            99999999999999987665     9999999999999999999999  7899999999999999999999999999986


Q ss_pred             ecccC--CcceeeccceeeccCccccchh--hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHH-
Q 019481          157 SAVEN--ADLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLY-  231 (340)
Q Consensus       157 ~~~~~--~~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-  231 (340)
                      .....  .....+||+.|++||...+...  ...|+                |+     +|++..++.+|..+|..... 
T Consensus       155 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di----------------ws-----lG~il~elltg~~pf~~~~~~  213 (332)
T cd05614         155 FLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDW----------------WS-----LGILIFELLTGASPFTLEGER  213 (332)
T ss_pred             ccccCCCccccccCCccccCHHHhcCCCCCCCcccc----------------cc-----chhhhhhhhcCCCCCCCCCCC
Confidence            54332  2334578888888854432110  11244                44     45555555555444421000 


Q ss_pred             --HHHHHHhhhhccccccCcCCc-------cccccccccCCCCch-----HHHHhhcCccee
Q 019481          232 --LLLIATLLSTITFLSALKITG-------CKSEEGYKNNSSLNP-----ICQIVNQHPFYI  279 (340)
Q Consensus       232 --~~~~~~~~~~~~~~~~~~~p~-------~~~~~~l~~dP~~R~-----t~~~ll~hp~~~  279 (340)
                        ........    ....+.+|.       ++...||+.||++||     +++++++|||+.
T Consensus       214 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~  271 (332)
T cd05614         214 NTQSEVSRRI----LKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFK  271 (332)
T ss_pred             CCHHHHHHHH----hcCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcC
Confidence              00000000    011122222       234478999999999     788999999993

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=2.1e-36  Score=272.37  Aligned_cols=236  Identities=13%  Similarity=0.079  Sum_probs=169.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCC-ccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHP-NQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp-nIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.||+|++..+++.||+|++.+..  .....+.+..|.++++.++|+ +|++++++|.       +.+.++++||
T Consensus         9 g~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-------~~~~~~lv~E   81 (324)
T cd05587           9 GKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ-------TMDRLYFVME   81 (324)
T ss_pred             eeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEE-------cCCEEEEEEc
Confidence            36899999999999999999999997521  233456678899999999865 5788888664       3347889999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc-
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-  159 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-  159 (340)
                      |+++|+|.+++.....     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.... 
T Consensus        82 ~~~~g~L~~~~~~~~~-----~~~~~~~~~~~qi~~al~~lH~--~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~  154 (324)
T cd05587          82 YVNGGDLMYHIQQVGK-----FKEPHAVFYAAEIAIGLFFLHS--KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG  154 (324)
T ss_pred             CCCCCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence            9999999999987665     8999999999999999999999  8899999999999999999999999999875432 


Q ss_pred             cCCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHh
Q 019481          160 ENADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATL  238 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (340)
                      .......+||+.|++|+.+.+..+- ..|+                |+     .|++..++.+|..||............
T Consensus       155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di----------------ws-----lGvil~elltG~~pf~~~~~~~~~~~i  213 (324)
T cd05587         155 GKTTRTFCGTPDYIAPEIIAYQPYGKSVDW----------------WA-----FGVLLYEMLAGQPPFDGEDEDELFQSI  213 (324)
T ss_pred             CCceeeecCCccccChhhhcCCCCCcccch----------------hh-----hHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            2333456788888888543322111 1233                44     444444444444444321111000000


Q ss_pred             hhhccccccCcCCcc-------ccccccccCCCCchHH-----HHhhcCccee
Q 019481          239 LSTITFLSALKITGC-------KSEEGYKNNSSLNPIC-----QIVNQHPFYI  279 (340)
Q Consensus       239 ~~~~~~~~~~~~p~~-------~~~~~l~~dP~~R~t~-----~~ll~hp~~~  279 (340)
                       .    ...+..|..       +...||.+||.+|+++     +++++|||+.
T Consensus       214 -~----~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~  261 (324)
T cd05587         214 -M----EHNVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFR  261 (324)
T ss_pred             -H----cCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcC
Confidence             0    111222222       3346799999999986     7999999993

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=7.6e-36  Score=268.91  Aligned_cols=241  Identities=16%  Similarity=0.096  Sum_probs=171.6

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHH-HhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLD-SLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~-~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.||+|++..+++.||+|++.+..  .....+.+.+|.. +++.++||||++++++|.       +.+..+++||
T Consensus         4 G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~-------~~~~~~lv~e   76 (325)
T cd05604           4 GKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQ-------TTEKLYFVLD   76 (325)
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEe-------cCCEEEEEEc
Confidence            35899999999999999999999997521  1233345566655 467899999999999765       3347789999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc-
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-  159 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-  159 (340)
                      |+++|+|.+.+.....     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.... 
T Consensus        77 ~~~~~~L~~~l~~~~~-----~~~~~~~~~~~qi~~al~~lH~--~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~  149 (325)
T cd05604          77 FVNGGELFFHLQRERS-----FPEPRARFYAAEIASALGYLHS--INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ  149 (325)
T ss_pred             CCCCCCHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC
Confidence            9999999999987665     9999999999999999999999  8899999999999999999999999999975432 


Q ss_pred             cCCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          160 ENADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      .......+||+.|++|+.+.+..             +.  ...+.|+     +|++..++.+|..+|............ 
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~~-------------~~--~~~Dvws-----lG~il~el~~G~~pf~~~~~~~~~~~~-  208 (325)
T cd05604         150 SDTTTTFCGTPEYLAPEVIRKQP-------------YD--NTVDWWC-----LGAVLYEMLYGLPPFYCRDVAEMYDNI-  208 (325)
T ss_pred             CCCcccccCChhhCCHHHHcCCC-------------CC--CcCcccc-----ccceehhhhcCCCCCCCCCHHHHHHHH-
Confidence            23334567888888885332211             11  1233466     666666776666665432111111101 


Q ss_pred             hhccccccCcCCc---cccccccccCCCCchHH----HHhhcCccee
Q 019481          240 STITFLSALKITG---CKSEEGYKNNSSLNPIC----QIVNQHPFYI  279 (340)
Q Consensus       240 ~~~~~~~~~~~p~---~~~~~~l~~dP~~R~t~----~~ll~hp~~~  279 (340)
                      ........+..+.   .+...++++||.+||++    +++++|||+.
T Consensus       209 ~~~~~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~  255 (325)
T cd05604         209 LHKPLVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFE  255 (325)
T ss_pred             HcCCccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcC
Confidence            0001111112211   23446799999999986    5899999993

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=8.4e-36  Score=272.27  Aligned_cols=188  Identities=17%  Similarity=0.088  Sum_probs=145.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|++..+++.||+|.+... ........+.+|+.+++.++||||++++++|...... .+....+++|||+
T Consensus        30 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~~~~~~lv~e~~  108 (359)
T cd07876          30 GSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSL-EEFQDVYLVMELM  108 (359)
T ss_pred             ecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCc-cccceeEEEEeCC
Confidence            3689999999999999999999999752 2234456678999999999999999999988654322 2233568999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      ++ +|.+.+..  .     +++..+..++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+++.......
T Consensus       109 ~~-~l~~~~~~--~-----~~~~~~~~~~~qi~~~L~~LH~--~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~  178 (359)
T cd07876         109 DA-NLCQVIHM--E-----LDHERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFM  178 (359)
T ss_pred             Cc-CHHHHHhc--c-----CCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEEECCCCCEEEecCCCccccccCcc
Confidence            75 77776642  2     7889999999999999999999  8899999999999999999999999999987655444


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCcccccccccc
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~  202 (340)
                      .....||+.|+||+...+..+. ..|+|+.|...+.+.++.
T Consensus       179 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~  219 (359)
T cd07876         179 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGS  219 (359)
T ss_pred             CCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCC
Confidence            4556788999999754432222 235666555555554443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-35  Score=263.11  Aligned_cols=241  Identities=13%  Similarity=0.042  Sum_probs=170.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||++.+..+++.||+|.+....  .......+.+|++++++++||||+++++.|.       +....+++|||
T Consensus         9 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------~~~~~~lv~e~   81 (285)
T cd05605           9 GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE-------TKDALCLVLTL   81 (285)
T ss_pred             ecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeec-------CCCeEEEEEec
Confidence            46899999999999999999999997422  1223355778999999999999999999664       33478899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+++.....   ..+++..+..++.|++.||+|||+  ++|+||||||+||++++++.++|+|||+++......
T Consensus        82 ~~~~~L~~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~  156 (285)
T cd05605          82 MNGGDLKFHIYNMGN---PGFDEERAVFYAAEITCGLEDLHR--ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE  156 (285)
T ss_pred             cCCCcHHHHHHhcCc---CCCCHHHHHHHHHHHHHHHHHHHH--CCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence            999999998876432   348999999999999999999999  889999999999999999999999999998775544


Q ss_pred             CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      ......|+..|++|+.+.+.+.. ..|+|+.|...+.+..                     |..+|..............
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~---------------------g~~pf~~~~~~~~~~~~~~  215 (285)
T cd05605         157 TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIE---------------------GKSPFRQRKEKVKREEVER  215 (285)
T ss_pred             ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHH---------------------CCCCCCCCchhhHHHHHHH
Confidence            44456788888888643321111 1244444444433333                     2222221100000000000


Q ss_pred             hccccccCcCC-------ccccccccccCCCCch-----HHHHhhcCcce
Q 019481          241 TITFLSALKIT-------GCKSEEGYKNNSSLNP-----ICQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~~~~~p-------~~~~~~~l~~dP~~R~-----t~~~ll~hp~~  278 (340)
                      .+ ....+..+       ..+...|++.||.+||     +++++++|||+
T Consensus       216 ~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~  264 (285)
T cd05605         216 RV-KEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFF  264 (285)
T ss_pred             Hh-hhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCc
Confidence            00 00111111       1234478999999999     89999999999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=7.3e-36  Score=263.06  Aligned_cols=247  Identities=15%  Similarity=0.057  Sum_probs=169.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc--hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP--LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+++++.+++.||+|.+.....  ....+....|++++++++||||++++++|.       +..+.+++|||
T Consensus         2 g~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~-------~~~~~~lv~e~   74 (277)
T cd05607           2 GKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFE-------SKTHLCLVMSL   74 (277)
T ss_pred             CCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEe-------cCCeEEEEEec
Confidence            368999999999999999999999864221  122344567999999999999999999665       34478899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      ++||+|.+++.....   ..+++..+..++.||+.||+|||+  .+|+||||||+||+++.++.+||+|||++.......
T Consensus        75 ~~g~~L~~~~~~~~~---~~~~~~~~~~~~~qi~~al~~lH~--~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~  149 (277)
T cd05607          75 MNGGDLKYHIYNVGE---RGLEMERVIHYSAQITCGILHLHS--MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK  149 (277)
T ss_pred             CCCCCHHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHH--CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc
Confidence            999999998876543   348999999999999999999999  789999999999999999999999999998776544


Q ss_pred             CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      ......|+..|++|+.+.+..+. ..|+|+.|+..+.+.++..+|.  .....            .  ............
T Consensus       150 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~--~~~~~------------~--~~~~~~~~~~~~  213 (277)
T cd05607         150 TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFK--DHKEK------------V--AKEELKRRTLED  213 (277)
T ss_pred             eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCC--CCcch------------h--hHHHHHHHhhcc
Confidence            43445678888888543322211 2245554444444433331121  10000            0  000000000000


Q ss_pred             hcccc--ccCcCCccccccccccCCCCchHH----HHhhcCcce
Q 019481          241 TITFL--SALKITGCKSEEGYKNNSSLNPIC----QIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~--~~~~~p~~~~~~~l~~dP~~R~t~----~~ll~hp~~  278 (340)
                      .+...  ..+....++...||+.||.+||++    ++++.|||+
T Consensus       214 ~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f  257 (277)
T cd05607         214 EVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFF  257 (277)
T ss_pred             ccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhh
Confidence            00000  001111233457899999999998    678899999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=1.1e-35  Score=267.95  Aligned_cols=240  Identities=15%  Similarity=0.092  Sum_probs=170.6

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHH-HhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLD-SLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~-~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.||+|++..+++.||+|++.+..  .......+.+|.. +++.++||||++++++|.       +.+..+++||
T Consensus         4 g~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~-------~~~~~~lv~e   76 (325)
T cd05602           4 GKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQ-------TADKLYFVLD   76 (325)
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEE-------cCCeEEEEEe
Confidence            36899999999999999999999997522  1222334444544 568899999999999765       3346789999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc-
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-  159 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-  159 (340)
                      |+++|+|.+++.....     +++..++.++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+++.... 
T Consensus        77 ~~~~~~L~~~~~~~~~-----~~~~~~~~~~~qi~~~L~~lH~--~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~  149 (325)
T cd05602          77 YINGGELFYHLQRERC-----FLEPRARFYAAEIASALGYLHS--LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH  149 (325)
T ss_pred             CCCCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHeEECCCCCEEEccCCCCcccccC
Confidence            9999999999987665     8999999999999999999999  8899999999999999999999999999976433 


Q ss_pred             cCCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          160 ENADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      .......+||+.|++|+...+..             +.  ...+.|+     +|++..++.+|..+|............ 
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~~-------------~~--~~~Diws-----lG~il~el~~g~~pf~~~~~~~~~~~i-  208 (325)
T cd05602         150 NGTTSTFCGTPEYLAPEVLHKQP-------------YD--RTVDWWC-----LGAVLYEMLYGLPPFYSRNTAEMYDNI-  208 (325)
T ss_pred             CCCcccccCCccccCHHHHcCCC-------------CC--Ccccccc-----ccHHHHHHhcCCCCCCCCCHHHHHHHH-
Confidence            23334567888888885332211             11  1233466     666666666666665432211111101 


Q ss_pred             hhccccccCcCCc---cccccccccCCCCchHHH----HhhcCcce
Q 019481          240 STITFLSALKITG---CKSEEGYKNNSSLNPICQ----IVNQHPFY  278 (340)
Q Consensus       240 ~~~~~~~~~~~p~---~~~~~~l~~dP~~R~t~~----~ll~hp~~  278 (340)
                      ........+.++.   ++...|+++||.+|+++.    ++++|+|+
T Consensus       209 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~  254 (325)
T cd05602         209 LNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFF  254 (325)
T ss_pred             HhCCcCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCccc
Confidence            1111111223332   234478999999999965    89999998

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.8e-35  Score=272.24  Aligned_cols=174  Identities=17%  Similarity=0.166  Sum_probs=138.1

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|.+..+++.||+|...       .+.+.+|++++++++||||++++++|..       ....++++|++.
T Consensus       101 g~G~~g~V~~~~d~~~~~~vaiK~~~-------~~~~~~E~~il~~l~HpnIv~~~~~~~~-------~~~~~lv~e~~~  166 (391)
T PHA03212        101 TPGAEGFAFACIDNKTCEHVVIKAGQ-------RGGTATEAHILRAINHPSIIQLKGTFTY-------NKFTCLILPRYK  166 (391)
T ss_pred             cCCCCeEEEEEEECCCCCEEEEechh-------hhhhHHHHHHHHhCCCCCCCCEeEEEEE-------CCeeEEEEecCC
Confidence            36999999999999999999999763       2346789999999999999999997753       235678899985


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc--C
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE--N  161 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~--~  161 (340)
                       ++|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+|+.....  .
T Consensus       167 -~~L~~~l~~~~~-----l~~~~~~~i~~qi~~aL~ylH~--~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~  238 (391)
T PHA03212        167 -TDLYCYLAAKRN-----IAICDILAIERSVLRAIQYLHE--NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINAN  238 (391)
T ss_pred             -CCHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCcccCCCChHhEEEcCCCCEEEEeCCccccccccccc
Confidence             699999887655     8999999999999999999999  78999999999999999999999999999754322  2


Q ss_pred             CcceeeccceeeccCccccchhh-hhHhHhCCccccccc
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEA  199 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~  199 (340)
                      .....+||+.|++|+.+.+..+- ..|+|+.|...+.+.
T Consensus       239 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell  277 (391)
T PHA03212        239 KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMA  277 (391)
T ss_pred             ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHH
Confidence            23346799999999743322211 235555555554443

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=3.5e-36  Score=281.08  Aligned_cols=260  Identities=15%  Similarity=0.079  Sum_probs=174.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCcccccccccccccccc-CCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLT-GDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~-~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|.+....     ....+|+.+|++++||||++++++|....... ....+.+++|||++
T Consensus        76 ~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~  150 (440)
T PTZ00036         76 NGSFGVVYEAICIDTSEKVAIKKVLQDP-----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIP  150 (440)
T ss_pred             eCCCEEEEEEEECCCCCEEEEEEEecCc-----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCC
Confidence            6899999999999999999999885321     23457999999999999999999876543222 22336779999997


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC-ceEEeccccceeecccCC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF-KCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~-~~kl~DFGla~~~~~~~~  162 (340)
                      + +|.+++..... ....+++..++.++.||+.||+|||+  ++|+||||||+|||++.++ .+||+|||+|+.+.....
T Consensus       151 ~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~gL~yLH~--~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~  226 (440)
T PTZ00036        151 Q-TVHKYMKHYAR-NNHALPLFLVKLYSYQLCRALAYIHS--KFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQR  226 (440)
T ss_pred             c-cHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHH--CCEecCCcCHHHEEEcCCCCceeeeccccchhccCCCC
Confidence            5 78777653211 01349999999999999999999999  8899999999999999764 799999999998766665


Q ss_pred             cceeeccceeeccCccccch-h-hhhHhHhCCccccccccccccCCCCCCcccccCCCccC--CchhHHHHHHHHHHHHh
Q 019481          163 DLTALDTSSVSAQSGKTGME-M-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKT--ENETWNNFLYLLLIATL  238 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~-~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~  238 (340)
                      .....||+.|+||+.+.+.. + ...|+|+.|+..+.+.++.  .||.+.........+..  +.+........   ...
T Consensus       227 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~--~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~---~~~  301 (440)
T PTZ00036        227 SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGY--PIFSGQSSVDQLVRIIQVLGTPTEDQLKEM---NPN  301 (440)
T ss_pred             cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCC--CCCCCCChHHHHHHHHHHhCCCCHHHHHHh---chh
Confidence            66678899999997654321 1 2347777777776665544  44433221110000000  11111100000   000


Q ss_pred             hhhcccccc------CcCC-------ccccccccccCCCCchHHHHhhcCcce
Q 019481          239 LSTITFLSA------LKIT-------GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       239 ~~~~~~~~~------~~~p-------~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ...+.+...      ..+|       .++...||++||.+|+|+.++++|||+
T Consensus       302 ~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f  354 (440)
T PTZ00036        302 YADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFF  354 (440)
T ss_pred             hhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhH
Confidence            000000000      0011       123447899999999999999999998

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=1.9e-35  Score=271.12  Aligned_cols=189  Identities=20%  Similarity=0.175  Sum_probs=145.4

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|.+..+++.||+|.+... ......+.+.+|+++++.++||||+++++++.....  ......++++||+
T Consensus         9 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~~~~~~lv~e~~   86 (372)
T cd07853           9 GYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHI--DPFEEIYVVTELM   86 (372)
T ss_pred             eeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCc--cccceEEEEeecc
Confidence            3689999999999999999999998642 223345678899999999999999999998764321  1122678999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-  161 (340)
                      . ++|.+.+.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++...... 
T Consensus        87 ~-~~l~~~~~~~~~-----l~~~~~~~~~~qi~~aL~~LH~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~  158 (372)
T cd07853          87 Q-SDLHKIIVSPQP-----LSSDHVKVFLYQILRGLKYLHS--AGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDES  158 (372)
T ss_pred             c-cCHHHHHhcCCC-----CCHHHHHHHHHHHHHHHHHHHh--CCeeCCCCChHHEEECCCCCEEeccccceeecccCcc
Confidence            6 589988877655     9999999999999999999999  789999999999999999999999999998654322 


Q ss_pred             -CcceeeccceeeccCccccchh--hhhHhHhCCcccccccccc
Q 019481          162 -ADLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       162 -~~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~~  202 (340)
                       ......+|+.|++|+.+.+...  ...|+|+.|...+.+.++.
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~  202 (372)
T cd07853         159 KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRR  202 (372)
T ss_pred             ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCC
Confidence             1223456777888864443221  1246666666555554433

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=6e-36  Score=269.33  Aligned_cols=236  Identities=13%  Similarity=0.071  Sum_probs=169.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.||+|++..+++.||+|++++..  .....+....|..++..+ +|++|++++++|.       +.+..+++||
T Consensus         9 g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-------~~~~~~lv~E   81 (323)
T cd05616           9 GKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQ-------TMDRLYFVME   81 (323)
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEe-------cCCEEEEEEc
Confidence            36889999999999999999999997532  223345567788888887 4889999998664       3447889999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc-
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-  159 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-  159 (340)
                      |+++|+|.+.+.....     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.... 
T Consensus        82 ~~~~g~L~~~~~~~~~-----~~~~~~~~~~~qi~~aL~~LH~--~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~  154 (323)
T cd05616          82 YVNGGDLMYQIQQVGR-----FKEPHAVFYAAEIAIGLFFLHS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD  154 (323)
T ss_pred             CCCCCCHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCEEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence            9999999999987665     9999999999999999999999  7899999999999999999999999999986442 


Q ss_pred             cCCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          160 ENADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      .......+||+.|+||+.+.+.++.               ...+.|+     .|++..++.+|..||............ 
T Consensus       155 ~~~~~~~~gt~~y~aPE~~~~~~~~---------------~~~DiwS-----lGvil~elltg~~Pf~~~~~~~~~~~i-  213 (323)
T cd05616         155 GVTTKTFCGTPDYIAPEIIAYQPYG---------------KSVDWWA-----FGVLLYEMLAGQAPFEGEDEDELFQSI-  213 (323)
T ss_pred             CCccccCCCChhhcCHHHhcCCCCC---------------Cccchhc-----hhHHHHHHHhCCCCCCCCCHHHHHHHH-
Confidence            2233456788888888533322111               1223344     455555555555544332111111100 


Q ss_pred             hhccccccCcCCcc-------ccccccccCCCCchHH-----HHhhcCcce
Q 019481          240 STITFLSALKITGC-------KSEEGYKNNSSLNPIC-----QIVNQHPFY  278 (340)
Q Consensus       240 ~~~~~~~~~~~p~~-------~~~~~l~~dP~~R~t~-----~~ll~hp~~  278 (340)
                      ..    ..+..|..       +...|+++||++|+++     +++++|||+
T Consensus       214 ~~----~~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~  260 (323)
T cd05616         214 ME----HNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFF  260 (323)
T ss_pred             Hh----CCCCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCc
Confidence            00    11122222       2346799999999984     799999999

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=1.9e-35  Score=261.68  Aligned_cols=166  Identities=19%  Similarity=0.162  Sum_probs=132.4

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc-hhhHHHHHHHHHHhhhc---CCCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP-LQLRRDDDGKLDSLEEI---FHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~~E~~~l~~l---~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|+||.||+|+++.+++.||+|.++.... ........+|+++++.+   +||||++++++|....  .......++++|
T Consensus        10 ~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~--~~~~~~~~lv~e   87 (288)
T cd07863          10 VGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSR--TDRETKVTLVFE   87 (288)
T ss_pred             ecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeecccc--CCCCceEEEEEc
Confidence            58899999999999999999999875322 12223456777777665   6999999999775432  123446789999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      |++ ++|.+++.....   ..+++..++.++.|++.||+|||+  ++|+||||||+|||++.++.+||+|||+++.....
T Consensus        88 ~~~-~~l~~~~~~~~~---~~~~~~~~~~~~~qi~~al~~lH~--~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~  161 (288)
T cd07863          88 HVD-QDLRTYLDKVPP---PGLPAETIKDLMRQFLRGLDFLHA--NCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQ  161 (288)
T ss_pred             ccc-cCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEECCCCCEEECccCccccccCc
Confidence            997 599998876543   348999999999999999999999  88999999999999999999999999999877654


Q ss_pred             CCcceeeccceeeccCcc
Q 019481          161 NADLTALDTSSVSAQSGK  178 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~  178 (340)
                      .......||..|++||.+
T Consensus       162 ~~~~~~~~~~~y~aPE~~  179 (288)
T cd07863         162 MALTPVVVTLWYRAPEVL  179 (288)
T ss_pred             ccCCCccccccccCchHh
Confidence            444455678888888643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=2e-35  Score=269.40  Aligned_cols=188  Identities=16%  Similarity=0.096  Sum_probs=147.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|.+..+++.||+|.+... ......+.+.+|+.+++.++||||++++++|...... .+....+++|||+
T Consensus        26 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~~~~~~lv~e~~  104 (355)
T cd07874          26 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSL-EEFQDVYLVMELM  104 (355)
T ss_pred             eecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccc-cccceeEEEhhhh
Confidence            3689999999999999999999998753 2233456778999999999999999999988654322 2334578999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      ++ +|.+.+..  .     +++..+..++.|+++||+|||+  ++|+||||||+|||++.++.+||+|||+++.......
T Consensus       105 ~~-~l~~~~~~--~-----l~~~~~~~~~~qi~~aL~~LH~--~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~  174 (355)
T cd07874         105 DA-NLCQVIQM--E-----LDHERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM  174 (355)
T ss_pred             cc-cHHHHHhh--c-----CCHHHHHHHHHHHHHHHHHHHh--CCcccCCCChHHEEECCCCCEEEeeCcccccCCCccc
Confidence            75 77777753  2     7889999999999999999999  8899999999999999999999999999987665544


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCcccccccccc
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~  202 (340)
                      .....||+.|+||+.+.+.++. ..|+|+.|...+.+.++.
T Consensus       175 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~  215 (355)
T cd07874         175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK  215 (355)
T ss_pred             cCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCC
Confidence            4566789999999754433322 236666666655554443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=2.6e-35  Score=269.57  Aligned_cols=188  Identities=16%  Similarity=0.092  Sum_probs=147.4

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|++..+++.||+|++... ......+.+.+|+.+++.++||||++++++|...... .+....+++|||+
T Consensus        33 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~-~~~~~~~lv~e~~  111 (364)
T cd07875          33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL-EEFQDVYIVMELM  111 (364)
T ss_pred             ecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccc-cccCeEEEEEeCC
Confidence            3689999999999999999999998752 2233456688999999999999999999987654322 2334678999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      ++ +|.+.+..  .     +++..+..++.|++.||+|||+  ++|+||||||+|||++.++.+||+|||+++.......
T Consensus       112 ~~-~l~~~~~~--~-----~~~~~~~~~~~qi~~aL~~LH~--~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~  181 (364)
T cd07875         112 DA-NLCQVIQM--E-----LDHERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM  181 (364)
T ss_pred             CC-CHHHHHHh--c-----CCHHHHHHHHHHHHHHHHHHhh--CCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCCc
Confidence            64 78877753  2     7889999999999999999999  8899999999999999999999999999987655444


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCcccccccccc
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~  202 (340)
                      .....||..|+||+.+.+.++. ..|+|+.|...+.+.++.
T Consensus       182 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~  222 (364)
T cd07875         182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG  222 (364)
T ss_pred             ccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCC
Confidence            4556788999999654433322 246666666665554444

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=2.9e-35  Score=264.23  Aligned_cols=188  Identities=18%  Similarity=0.141  Sum_probs=142.1

Q ss_pred             CCCcceEEEEEEcC--CCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFP--DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~--~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|+++  .+++.||+|.+....   ......+|++++++++||||++++++|..     .....+++++||
T Consensus        10 G~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~~~~lv~e~   81 (317)
T cd07868          10 GRGTYGHVYKAKRKDGKDDRDYALKQIEGTG---ISMSACREIALLRELKHPNVISLQKVFLS-----HADRKVWLLFDY   81 (317)
T ss_pred             ccCCCeEEEEEEEccCCCCceEEEEEECCCC---CcHHHHHHHHHHHhcCCCCCcceeeeEec-----CCCcEEEEEEec
Confidence            46899999999965  467889999986422   23456789999999999999999997743     234468899999


Q ss_pred             ccCCCHHHHhcccCCC----ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEe----cCCCceEEecccc
Q 019481           82 MQKKGLENVHIGEHPA----SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILL----DETFKCNLSDFST  153 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~----~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl----~~~~~~kl~DFGl  153 (340)
                      +. ++|.+++......    ....+++..++.++.||+.||+|||+  ++|+||||||+|||+    +.++.+||+|||+
T Consensus        82 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~--~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~  158 (317)
T cd07868          82 AE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA--NWVLHRDLKPANILVMGEGPERGRVKIADMGF  158 (317)
T ss_pred             cC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh--CCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence            96 5898887643210    01248999999999999999999999  889999999999999    4568899999999


Q ss_pred             ceeecccC----CcceeeccceeeccCccccch-h-hhhHhHhCCcccccccccc
Q 019481          154 AKVSAVEN----ADLTALDTSSVSAQSGKTGME-M-KMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       154 a~~~~~~~----~~~~~~gt~~~~~p~~~~~~~-~-~~~~~~s~g~~~~~~~~~~  202 (340)
                      |+......    ......||+.|+|||.+.+.. + ...|+|+.|...+.+.++.
T Consensus       159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~  213 (317)
T cd07868         159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE  213 (317)
T ss_pred             eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCC
Confidence            98765432    123457888999997554422 1 1347777777666665444

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.4e-35  Score=267.72  Aligned_cols=187  Identities=17%  Similarity=0.136  Sum_probs=145.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|.+..+++.||+|.+.... .....+.+.+|++++++++||||++++++|...... ......+++++++
T Consensus        24 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-~~~~~~~~~~~~~  102 (343)
T cd07878          24 GSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSI-ENFNEVYLVTNLM  102 (343)
T ss_pred             ccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccc-cccCcEEEEeecC
Confidence            36899999999999999999999987522 223345677899999999999999999988643221 2223567889988


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                       +++|.+++... .     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.....  
T Consensus       103 -~~~l~~~~~~~-~-----l~~~~~~~i~~qi~~aL~~LH~--~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~--  171 (343)
T cd07878         103 -GADLNNIVKCQ-K-----LSDEHVQFLIYQLLRGLKYIHS--AGIIHRDLKPSNVAVNEDCELRILDFGLARQADDE--  171 (343)
T ss_pred             -CCCHHHHHhcC-C-----CCHHHHHHHHHHHHHHHHHHHH--CCeecccCChhhEEECCCCCEEEcCCccceecCCC--
Confidence             78999888643 2     8999999999999999999999  88999999999999999999999999999876442  


Q ss_pred             cceeeccceeeccCccccchh--hhhHhHhCCcccccccccc
Q 019481          163 DLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~~  202 (340)
                      .....||+.|+||+.+.+...  ...|+|+.|...+.+..+.
T Consensus       172 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~  213 (343)
T cd07878         172 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGK  213 (343)
T ss_pred             cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCC
Confidence            335578888999875443211  1346666666665554444

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=2.7e-35  Score=278.38  Aligned_cols=249  Identities=15%  Similarity=0.062  Sum_probs=174.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCcccccccccccccccc-CCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLT-GDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~-~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|+++.. ........+.+|+.++..++|+||+++++.|....... ......++++||+
T Consensus        42 ~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~  121 (496)
T PTZ00283         42 SGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYA  121 (496)
T ss_pred             cCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCC
Confidence            589999999999999999999999753 23445567889999999999999999998765332111 1122467999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc--
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE--  160 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~--  160 (340)
                      ++|+|.+++...... ...+++..+..++.|++.||+|||+  ++|+||||||+|||++.++.+||+|||+++.+...  
T Consensus       122 ~~gsL~~~l~~~~~~-~~~l~e~~~~~i~~qll~aL~~lH~--~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~  198 (496)
T PTZ00283        122 NAGDLRQEIKSRAKT-NRTFREHEAGLLFIQVLLAVHHVHS--KHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVS  198 (496)
T ss_pred             CCCcHHHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHEEEeCCCCEEEEecccCeecccccc
Confidence            999999999754321 2358999999999999999999999  88999999999999999999999999999876432  


Q ss_pred             -CCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHh
Q 019481          161 -NADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATL  238 (340)
Q Consensus       161 -~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (340)
                       ....+.+||+.|++|+.+.+..+. ..|+|+.|...+.+.++.  .||......              ....    ...
T Consensus       199 ~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~--~Pf~~~~~~--------------~~~~----~~~  258 (496)
T PTZ00283        199 DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLK--RPFDGENME--------------EVMH----KTL  258 (496)
T ss_pred             ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCC--CCCCCCCHH--------------HHHH----HHh
Confidence             223456799999999654432221 235555555554443333  222211110              0000    000


Q ss_pred             hhhcccc-ccCcCCc---cccccccccCCCCchHHHHhhcCcce
Q 019481          239 LSTITFL-SALKITG---CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       239 ~~~~~~~-~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                        ..... .++.++.   .+...||+.||.+||+++++++|||+
T Consensus       259 --~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~  300 (496)
T PTZ00283        259 --AGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPIC  300 (496)
T ss_pred             --cCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHH
Confidence              00000 0111111   22346799999999999999999997

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=6.4e-35  Score=267.12  Aligned_cols=160  Identities=19%  Similarity=0.173  Sum_probs=135.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-C-----CccccccccccccccccCCcceeee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-H-----PNQVKPSGYWSMNICLTGDRRYCWK   77 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-h-----pnIv~l~~~f~~~~~~~~~~~~~~~   77 (340)
                      .+|+||.|-+|.+..|++.||||++++.  ..-..+-..|+.+|..|+ |     -|+|+++++|...+       +.++
T Consensus       195 GkGtFGQVvk~~d~~T~e~VAIKIiKN~--k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~-------Hlci  265 (586)
T KOG0667|consen  195 GKGSFGQVVKAYDHKTGEIVAIKIIKNK--KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN-------HLCI  265 (586)
T ss_pred             cccccceeEEEEecCCCcEEEEEeeccC--hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc-------ceee
Confidence            4799999999999999999999999743  344566688999999997 4     39999999998554       6679


Q ss_pred             eeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC--CCceEEeccccce
Q 019481           78 NKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE--TFKCNLSDFSTAK  155 (340)
Q Consensus        78 ~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~--~~~~kl~DFGla~  155 (340)
                      |+|.++ -+|+++++.+..   .+++...++.++.||+.||.+||+  .+|||+|||||||||.+  ...+||+|||.|.
T Consensus       266 VfELL~-~NLYellK~n~f---~Glsl~~ir~~~~Qil~~L~~L~~--l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc  339 (586)
T KOG0667|consen  266 VFELLS-TNLYELLKNNKF---RGLSLPLVRKFAQQILTALLFLHE--LGIIHCDLKPENILLKDPKRSRIKVIDFGSSC  339 (586)
T ss_pred             eehhhh-hhHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHh--CCeeeccCChhheeeccCCcCceeEEeccccc
Confidence            999996 499999999876   679999999999999999999999  88999999999999976  3479999999998


Q ss_pred             eecccCCcceeeccceeeccCcccc
Q 019481          156 VSAVENADLTALDTSSVSAQSGKTG  180 (340)
Q Consensus       156 ~~~~~~~~~~~~gt~~~~~p~~~~~  180 (340)
                      .....  ..+++.+..|.|||.+.|
T Consensus       340 ~~~q~--vytYiQSRfYRAPEVILG  362 (586)
T KOG0667|consen  340 FESQR--VYTYIQSRFYRAPEVILG  362 (586)
T ss_pred             ccCCc--ceeeeeccccccchhhcc
Confidence            76543  337888888888864333

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1e-34  Score=262.23  Aligned_cols=161  Identities=14%  Similarity=0.035  Sum_probs=134.6

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||++++..+++.||+|++++..  .....+.+.+|+.+++.++||||++++++|.       +..+.+++|||
T Consensus        10 G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-------~~~~~~lv~e~   82 (331)
T cd05597          10 GRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQ-------DENNLYLVMDY   82 (331)
T ss_pred             EecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEe-------cCCeEEEEEec
Confidence            36999999999999999999999997421  2233456788999999999999999999765       34478899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+++.+...    .+++..++.++.||+.||+|||+  ++|+||||||+|||++.++++||+|||+++.+....
T Consensus        83 ~~g~~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~  156 (331)
T cd05597          83 YVGGDLLTLLSKFED----RLPEDMARFYLAEMVLAIDSVHQ--LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG  156 (331)
T ss_pred             CCCCcHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHh--CCeEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence            999999999976433    38999999999999999999999  889999999999999999999999999998765433


Q ss_pred             C--cceeeccceeeccCc
Q 019481          162 A--DLTALDTSSVSAQSG  177 (340)
Q Consensus       162 ~--~~~~~gt~~~~~p~~  177 (340)
                      .  ....+||+.|++|+.
T Consensus       157 ~~~~~~~~gt~~y~aPE~  174 (331)
T cd05597         157 TVQSNVAVGTPDYISPEI  174 (331)
T ss_pred             CccccceeccccccCHHH
Confidence            2  223468888888843

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=4.9e-35  Score=267.92  Aligned_cols=159  Identities=21%  Similarity=0.103  Sum_probs=134.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|++..+++.||+|++.+..  .....+.+.+|+.+++.++||||++++++|.       +..+.+++|||
T Consensus        52 G~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~-------~~~~~~lv~Ey  124 (371)
T cd05622          52 GRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ-------DDRYLYMVMEY  124 (371)
T ss_pred             eecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-------cCCEEEEEEcC
Confidence            36899999999999999999999997421  2233455788999999999999999999665       44578899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.++++...      +++..+..++.||+.||+|||+  ++|+||||||+|||++.++++||+|||+++......
T Consensus       125 ~~gg~L~~~~~~~~------~~~~~~~~~~~qi~~aL~~LH~--~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~  196 (371)
T cd05622         125 MPGGDLVNLMSNYD------VPEKWARFYTAEVVLALDAIHS--MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG  196 (371)
T ss_pred             CCCCcHHHHHHhcC------CCHHHHHHHHHHHHHHHHHHHH--CCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCC
Confidence            99999999997532      8999999999999999999999  889999999999999999999999999998765432


Q ss_pred             --CcceeeccceeeccCc
Q 019481          162 --ADLTALDTSSVSAQSG  177 (340)
Q Consensus       162 --~~~~~~gt~~~~~p~~  177 (340)
                        ...+.+||+.|+||+.
T Consensus       197 ~~~~~~~~gt~~y~aPE~  214 (371)
T cd05622         197 MVRCDTAVGTPDYISPEV  214 (371)
T ss_pred             cccccCcccCccccCHHH
Confidence              2235678888888854

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=3.1e-35  Score=277.59  Aligned_cols=238  Identities=15%  Similarity=0.026  Sum_probs=169.1

Q ss_pred             CCcceEEEEEEcCCC-CceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDD-RDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~-~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|....+ ++.||+|.+.... ......+.+|+++++.++||||++++++|..       .+..+++|||++
T Consensus        77 ~G~~g~vy~a~~~~~~~~~vv~K~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~-------~~~~~lv~E~~~  148 (478)
T PTZ00267         77 RNPTTAAFVATRGSDPKEKVVAKFVMLND-ERQAAYARSELHCLAACDHFGIVKHFDDFKS-------DDKLLLIMEYGS  148 (478)
T ss_pred             eCCCcEEEEEEEcCCCCeEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEE-------CCEEEEEEECCC
Confidence            589999999998877 7889999875433 3444567889999999999999999997753       347789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC--
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN--  161 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--  161 (340)
                      ||+|.+++..... ....+++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++......  
T Consensus       149 gg~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH~--~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~  225 (478)
T PTZ00267        149 GGDLNKQIKQRLK-EHLPFQEYEVGLLFYQIVLALDEVHS--RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL  225 (478)
T ss_pred             CCCHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHh--CCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc
Confidence            9999998864321 01348999999999999999999999  889999999999999999999999999998765432  


Q ss_pred             -CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          162 -ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       162 -~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                       ...+.+||+.|++|+.+.+..+. ..|+|+.|...+.+.                     ++..||..........   
T Consensus       226 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~---------------------tg~~Pf~~~~~~~~~~---  281 (478)
T PTZ00267        226 DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELL---------------------TLHRPFKGPSQREIMQ---  281 (478)
T ss_pred             ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHH---------------------hCCCCCCCCCHHHHHH---
Confidence             23456789999999644332221 124554444444433                     3333322111110000   


Q ss_pred             hhccccccCcCCcc-------ccccccccCCCCchHHHHhhcCcce
Q 019481          240 STITFLSALKITGC-------KSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       240 ~~~~~~~~~~~p~~-------~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                       .+.....+..|..       +...||+.||++||++++++.|||+
T Consensus       282 -~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~  326 (478)
T PTZ00267        282 -QVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFL  326 (478)
T ss_pred             -HHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHH
Confidence             0001111111211       2346799999999999999999998

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=1.4e-34  Score=262.07  Aligned_cols=167  Identities=18%  Similarity=0.111  Sum_probs=130.5

Q ss_pred             CCCcceEEEEEEc-----CCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeee
Q 019481            4 SAPSFSVLIHVPF-----PDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWK   77 (340)
Q Consensus         4 ~~G~fg~V~~~~~-----~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~   77 (340)
                      ..|+||.||+|.+     ..+++.||+|+++........+.+.+|+++++++ +||||+++++++..      .....++
T Consensus        16 G~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~------~~~~~~l   89 (338)
T cd05102          16 GHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTK------PNGPLMV   89 (338)
T ss_pred             ccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecC------CCCceEE
Confidence            4789999999974     3456789999997544444556789999999999 89999999996642      2235778


Q ss_pred             eeccccCCCHHHHhcccCCC---------------------------------------------------------ccc
Q 019481           78 NKWLMQKKGLENVHIGEHPA---------------------------------------------------------SVR  100 (340)
Q Consensus        78 ~~e~~~~gsL~~~l~~~~~~---------------------------------------------------------~~~  100 (340)
                      +|||+++|+|.+++......                                                         ...
T Consensus        90 v~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (338)
T cd05102          90 IVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKS  169 (338)
T ss_pred             EEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccC
Confidence            99999999999999754210                                                         012


Q ss_pred             cCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC---cceeeccceeeccCc
Q 019481          101 QLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA---DLTALDTSSVSAQSG  177 (340)
Q Consensus       101 ~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~---~~~~~gt~~~~~p~~  177 (340)
                      .+++..+..++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+++.......   ..+..++..|+||+.
T Consensus       170 ~l~~~~~~~~~~qi~~aL~~LH~--~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~  247 (338)
T cd05102         170 PLTMEDLICYSFQVARGMEFLAS--RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPES  247 (338)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHH--CCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHH
Confidence            47888999999999999999999  8899999999999999999999999999986543221   112234566888863


Q ss_pred             c
Q 019481          178 K  178 (340)
Q Consensus       178 ~  178 (340)
                      .
T Consensus       248 ~  248 (338)
T cd05102         248 I  248 (338)
T ss_pred             h
Confidence            3

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.5e-34  Score=263.72  Aligned_cols=174  Identities=18%  Similarity=0.158  Sum_probs=137.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|++..+++.||+|+....       ...+|+.++++++||||++++++|..       ....++++|++.
T Consensus        75 g~G~~g~Vy~~~~~~~~~~valK~~~~~-------~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~~~lv~e~~~  140 (357)
T PHA03209         75 TPGSEGRVFVATKPGQPDPVVLKIGQKG-------TTLIEAMLLQNVNHPSVIRMKDTLVS-------GAITCMVLPHYS  140 (357)
T ss_pred             cCCCCeEEEEEEECCCCceEEEEeCCcc-------ccHHHHHHHHhCCCCCCcChhheEEe-------CCeeEEEEEccC
Confidence            3689999999999999999999986422       23569999999999999999997753       336678999995


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                       |+|.+++.....    .+++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++........
T Consensus       141 -~~l~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~--~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~  213 (357)
T PHA03209        141 -SDLYTYLTKRSR----PLPIDQALIIEKQILEGLRYLHA--QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAF  213 (357)
T ss_pred             -CcHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEECCCCCEEEecCccccccccCccc
Confidence             699998876543    49999999999999999999999  78999999999999999999999999999765444444


Q ss_pred             ceeeccceeeccCccccchhh-hhHhHhCCcccccc
Q 019481          164 LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDE  198 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~  198 (340)
                      ....||..|++|+.+.+..+. ..|+|+.|...+.+
T Consensus       214 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~el  249 (357)
T PHA03209        214 LGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEM  249 (357)
T ss_pred             ccccccccccCCeecCCCCCCchhhHHHHHHHHHHH
Confidence            456789999999744332211 23555555554443

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=1.9e-35  Score=266.10  Aligned_cols=240  Identities=13%  Similarity=0.051  Sum_probs=167.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.||+|+++.+++.||+|++.+..  .....+.+..|..+++.+. |++|++++++|.       +....+++||
T Consensus         9 g~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-------~~~~~~lv~E   81 (323)
T cd05615           9 GKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQ-------TVDRLYFVME   81 (323)
T ss_pred             EecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEe-------cCCEEEEEEc
Confidence            36899999999999999999999997522  1233456778999998886 567788888664       3347889999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      |+++|+|.+++.....     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.....
T Consensus        82 y~~~g~L~~~i~~~~~-----l~~~~~~~i~~qi~~al~~lH~--~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~  154 (323)
T cd05615          82 YVNGGDLMYHIQQVGK-----FKEPQAVFYAAEISVGLFFLHR--RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD  154 (323)
T ss_pred             CCCCCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence            9999999999987665     9999999999999999999999  78999999999999999999999999999864332


Q ss_pred             -CCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          161 -NADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       161 -~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                       ......+||+.|+||+...+..+             .  ...+.|+     .|++..++.+|..||............ 
T Consensus       155 ~~~~~~~~gt~~y~aPE~~~~~~~-------------~--~~~Diws-----lGvil~elltG~~pf~~~~~~~~~~~i-  213 (323)
T cd05615         155 GVTTRTFCGTPDYIAPEIIAYQPY-------------G--KSVDWWA-----YGVLLYEMLAGQPPFDGEDEDELFQSI-  213 (323)
T ss_pred             CccccCccCCccccCHHHHcCCCC-------------C--Cccchhh-----hHHHHHHHHhCCCCCCCCCHHHHHHHH-
Confidence             22334568888888843322111             1  1122344     444444555544444332111111100 


Q ss_pred             hhccccccCcCC---ccccccccccCCCCchH-----HHHhhcCcce
Q 019481          240 STITFLSALKIT---GCKSEEGYKNNSSLNPI-----CQIVNQHPFY  278 (340)
Q Consensus       240 ~~~~~~~~~~~p---~~~~~~~l~~dP~~R~t-----~~~ll~hp~~  278 (340)
                      ......-+..++   .++...||++||.+|++     .+++++|||+
T Consensus       214 ~~~~~~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f  260 (323)
T cd05615         214 MEHNVSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFF  260 (323)
T ss_pred             HhCCCCCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCccc
Confidence            000110011111   12334679999999997     4689999999

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=1.6e-35  Score=264.92  Aligned_cols=260  Identities=15%  Similarity=0.086  Sum_probs=177.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|++..+++.||+|.++..........+.+|++++++++||||+++++++.       +....++++||++
T Consensus        15 g~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------~~~~~~lv~e~~~   87 (309)
T cd07872          15 GEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVH-------TDKSLTLVFEYLD   87 (309)
T ss_pred             cccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEe-------eCCeEEEEEeCCC
Confidence            368999999999999999999999975433334456788999999999999999999664       3346789999997


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-C
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-A  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~  162 (340)
                      + +|.+.+.....    .+++..+..++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+++...... .
T Consensus        88 ~-~l~~~~~~~~~----~~~~~~~~~~~~qi~~aL~~lH~--~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~  160 (309)
T cd07872          88 K-DLKQYMDDCGN----IMSMHNVKIFLYQILRGLAYCHR--RKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKT  160 (309)
T ss_pred             C-CHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEECCCCCEEECccccceecCCCccc
Confidence            5 89888876543    38999999999999999999999  889999999999999999999999999997654322 2


Q ss_pred             cceeeccceeeccCccccch--hhhhHhHhCCccccccccccccCCCCCCcccccCCC----ccC-CchhHHHHHHHHHH
Q 019481          163 DLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPN----LKT-ENETWNNFLYLLLI  235 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~-~~~~~~~~~~~~~~  235 (340)
                      .....+|+.|++|+...+..  -...|+|+.|...+.+.++.  .||...........    +.. ....|+........
T Consensus       161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~--~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (309)
T cd07872         161 YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGR--PLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEF  238 (309)
T ss_pred             cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCC--CCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhh
Confidence            23446788899987554321  12357777777776665554  33322221111000    000 11112221111000


Q ss_pred             HHhhhhccc------cccCcCCc---cccccccccCCCCchHHHHhhcCcceee
Q 019481          236 ATLLSTITF------LSALKITG---CKSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       236 ~~~~~~~~~------~~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                      ... ....+      ...+.++.   ++...||+.||.+|||++++++|||+..
T Consensus       239 ~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~  291 (309)
T cd07872         239 KNY-NFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRS  291 (309)
T ss_pred             hhh-hcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhh
Confidence            000 00000      00011222   2344779999999999999999999943

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=8.8e-35  Score=260.06  Aligned_cols=182  Identities=19%  Similarity=0.102  Sum_probs=143.9

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||++.+..+++.+|+|.++..........+.+|++++++++||||+++++.|.       +.+..++++||++
T Consensus        10 g~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------~~~~~~lv~ey~~   82 (308)
T cd06615          10 GAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFY-------SDGEISICMEHMD   82 (308)
T ss_pred             cCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-------eCCEEEEEeeccC
Confidence            468999999999999999999999976444455567889999999999999999999765       3347789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +++|.++++....     +++..+..++.|+++||.|||+. .+++||||||+|||++.++.+||+|||+++...... .
T Consensus        83 ~~~L~~~l~~~~~-----~~~~~~~~~~~~i~~~l~~lH~~-~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-~  155 (308)
T cd06615          83 GGSLDQVLKKAGR-----IPENILGKISIAVLRGLTYLREK-HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-A  155 (308)
T ss_pred             CCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHhh-CCEEECCCChHHEEEecCCcEEEccCCCcccccccc-c
Confidence            9999999987655     89999999999999999999971 259999999999999999999999999987654322 2


Q ss_pred             ceeeccceeeccCccccchhh-hhHhHhCCccccccc
Q 019481          164 LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEA  199 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~  199 (340)
                      ....|+..|++|+.+.+.... ..|+|+.|...+.+.
T Consensus       156 ~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~  192 (308)
T cd06615         156 NSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMA  192 (308)
T ss_pred             ccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHH
Confidence            345678888888643222111 134454444444443

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=7.7e-35  Score=257.57  Aligned_cols=245  Identities=14%  Similarity=0.068  Sum_probs=169.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|.+..+++.||+|.+....  .......+.+|+.++++++|+||+++++.+.       +....++++||+
T Consensus        10 ~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-------~~~~~~lv~e~~   82 (285)
T cd05630          10 KGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYE-------TKDALCLVLTLM   82 (285)
T ss_pred             cCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEe-------cCCEEEEEEEec
Confidence            5899999999999999999999987522  1223355778999999999999999998664       334678999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      ++|+|.+++.....   ..+++..+..++.|++.||.|||+  .+|+||||||+||+++.++.++|+|||++........
T Consensus        83 ~g~~L~~~l~~~~~---~~l~~~~~~~~~~qi~~~l~~lH~--~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~  157 (285)
T cd05630          83 NGGDLKFHIYHMGE---AGFEEGRAVFYAAEICCGLEDLHQ--ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT  157 (285)
T ss_pred             CCCcHHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHh--CCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc
Confidence            99999999865443   348999999999999999999999  7799999999999999999999999999987655444


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      .....|+..|+||+....-... ..|+|+.|...+.+..+.  .||......          ......      ......
T Consensus       158 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~--~Pf~~~~~~----------~~~~~~------~~~~~~  219 (285)
T cd05630         158 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ--SPFQQRKKK----------IKREEV------ERLVKE  219 (285)
T ss_pred             ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCC--CCCCCCCcc----------chHHHH------Hhhhhh
Confidence            3445688888888533211111 124444444443333322  222111000          000000      000000


Q ss_pred             ccccccCcC---CccccccccccCCCCchH-----HHHhhcCccee
Q 019481          242 ITFLSALKI---TGCKSEEGYKNNSSLNPI-----CQIVNQHPFYI  279 (340)
Q Consensus       242 ~~~~~~~~~---p~~~~~~~l~~dP~~R~t-----~~~ll~hp~~~  279 (340)
                      .........   ..++...||+.||.+|||     ++++++|||+.
T Consensus       220 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~  265 (285)
T cd05630         220 VQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFK  265 (285)
T ss_pred             hhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhh
Confidence            000000111   123455789999999999     89999999993

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-34  Score=251.88  Aligned_cols=237  Identities=16%  Similarity=0.146  Sum_probs=169.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc----hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP----LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      ..|++|.||+|.+..+++.||+|.+.....    ....+.+.+|++++++++||||+++++++.       +....++++
T Consensus        11 g~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-------~~~~~~~v~   83 (263)
T cd06625          11 GQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLR-------DDETLSIFM   83 (263)
T ss_pred             cCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEc-------cCCeEEEEE
Confidence            468899999999999999999999874221    123456889999999999999999999765       334788999


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      ||+++++|.+.+.....     +++..+..++.|++.||+|||+  .+|+||||||+||+++.++++||+|||+++....
T Consensus        84 e~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~l~~~l~~lH~--~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~  156 (263)
T cd06625          84 EYMPGGSVKDQLKAYGA-----LTETVTRKYTRQILEGVEYLHS--NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT  156 (263)
T ss_pred             EECCCCcHHHHHHHhCC-----CCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence            99999999999987665     8999999999999999999999  7799999999999999999999999999986643


Q ss_pred             cCCc----ceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHH
Q 019481          160 ENAD----LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLL  234 (340)
Q Consensus       160 ~~~~----~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (340)
                      ....    ....|+..|++|+...+.... ..|+|+                     +|++..++.+|..+|........
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s---------------------lG~il~el~~g~~p~~~~~~~~~  215 (263)
T cd06625         157 ICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWS---------------------VGCTVVEMLTEKPPWAEFEAMAA  215 (263)
T ss_pred             cccccccccCCCcCccccCcceeccCCCCchhhhHH---------------------HHHHHHHHHhCCCCccccchHHH
Confidence            2211    234566777777544332211 123333                     34444444444444332211111


Q ss_pred             HHHhhhhccccccCcCCc-------cccccccccCCCCchHHHHhhcCcce
Q 019481          235 IATLLSTITFLSALKITG-------CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       235 ~~~~~~~~~~~~~~~~p~-------~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ....   ......+..|.       .+...|+..||.+|||+.++++|||+
T Consensus       216 ~~~~---~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         216 IFKI---ATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             HHHH---hccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence            0000   01111122222       23447899999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=7.5e-35  Score=261.14  Aligned_cols=232  Identities=17%  Similarity=0.113  Sum_probs=164.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      +|-||.|+.|....+ ..||+|.++..  ....+.+.+|+++|++|+|+|||+++++..       .+.-+++|||||+.
T Consensus       216 ~G~FG~V~~g~~~~~-~~vavk~ik~~--~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~-------~~~piyIVtE~m~~  285 (468)
T KOG0197|consen  216 SGQFGEVWLGKWNGS-TKVAVKTIKEG--SMSPEAFLREAQIMKKLRHEKLVKLYGVCT-------KQEPIYIVTEYMPK  285 (468)
T ss_pred             CCccceEEEEEEcCC-CcccceEEecc--ccChhHHHHHHHHHHhCcccCeEEEEEEEe-------cCCceEEEEEeccc
Confidence            689999999998654 35999999742  233467889999999999999999999443       33357899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCcc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADL  164 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~  164 (340)
                      |+|.++|+...+   ..+...+.+.++.|||+|++||++  +++|||||-..||||+++..+||+|||+||...++.-..
T Consensus       286 GsLl~yLr~~~~---~~l~~~~Ll~~a~qIaeGM~YLes--~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~  360 (468)
T KOG0197|consen  286 GSLLDYLRTREG---GLLNLPQLLDFAAQIAEGMAYLES--KNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTA  360 (468)
T ss_pred             CcHHHHhhhcCC---CccchHHHHHHHHHHHHHHHHHHh--CCccchhhhhhheeeccCceEEEcccccccccCCCceee
Confidence            999999998333   459999999999999999999999  889999999999999999999999999999655443211


Q ss_pred             eeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccC-CchhHHHHHHHHHHHHhhhhcc
Q 019481          165 TALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKT-ENETWNNFLYLLLIATLLSTIT  243 (340)
Q Consensus       165 ~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~  243 (340)
                          +..-..|.-+.+||.+..-.+|         ...+.|+     .|.+..|+.+ |..|++......    .+..+.
T Consensus       361 ----~~~~kfPIkWtAPEa~~~~~FS---------~kSDVWS-----FGVlL~E~fT~G~~py~~msn~e----v~~~le  418 (468)
T KOG0197|consen  361 ----SEGGKFPIKWTAPEALNYGKFS---------SKSDVWS-----FGVLLWELFTYGRVPYPGMSNEE----VLELLE  418 (468)
T ss_pred             ----cCCCCCCceecCHHHHhhCCcc---------cccceee-----hhhhHHHHhccCCCCCCCCCHHH----HHHHHh
Confidence                1222334445555655433222         2333455     4555555554 555555544332    222233


Q ss_pred             ccccCcCCccc-------cccccccCCCCchHHHHhh
Q 019481          244 FLSALKITGCK-------SEEGYKNNSSLNPICQIVN  273 (340)
Q Consensus       244 ~~~~~~~p~~~-------~~~~l~~dP~~R~t~~~ll  273 (340)
                      .+-...-|..+       -..|++.+|+.|||.+.|.
T Consensus       419 ~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~  455 (468)
T KOG0197|consen  419 RGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLR  455 (468)
T ss_pred             ccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence            33332222222       2378999999999988553

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=100.00  E-value=7.2e-36  Score=245.29  Aligned_cols=244  Identities=18%  Similarity=0.129  Sum_probs=192.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||+|++-.++.+|+..|+|.+.....+..+++++.|.+...+- ++||||++||.       .-.++.||+.||+|.
T Consensus        74 ~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa-------~F~EGdcWiCMELMd  146 (361)
T KOG1006|consen   74 NGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGA-------LFSEGDCWICMELMD  146 (361)
T ss_pred             CCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhh-------hhcCCceeeeHHHHh
Confidence            5899999999999999999999999877778888999999875554 69999999993       335668999999996


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                       -||..+.+.-...-+..++|.....|+...+.||.||-.- ..|||||+||+|||+|..|.+||||||++..+.++-..
T Consensus       147 -~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~-lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAk  224 (361)
T KOG1006|consen  147 -ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE-LKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAK  224 (361)
T ss_pred             -hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH-hhhhhccCChhheEEecCCCEeeecccchHhHHHHHHh
Confidence             4776654321111113499999999999999999999872 44999999999999999999999999999988777666


Q ss_pred             ceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhcc
Q 019481          164 LTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTIT  243 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  243 (340)
                      ....|...||||+..-...-             .+....+.|+     +|++..|+.+|..|++....+   .+++..+.
T Consensus       225 T~daGCrpYmAPERi~p~~~-------------gyDiRSDvWS-----LGITL~EvAtG~fPyr~w~sv---feql~~Vv  283 (361)
T KOG1006|consen  225 TVDAGCRPYMAPERIDPSDK-------------GYDIRSDVWS-----LGITLYEVATGNFPYRKWDSV---FEQLCQVV  283 (361)
T ss_pred             hhccCCccccChhccCCccC-------------Ccchhhhhhh-----hcceEeeeecCCCCcchHHHH---HHHHHHHH
Confidence            67789999999965432221             1222445588     888889999999998888776   44555666


Q ss_pred             ccccCcCCccc-----c-------ccccccCCCCchHHHHhhcCcce
Q 019481          244 FLSALKITGCK-----S-------EEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       244 ~~~~~~~p~~~-----~-------~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .+.+|.+-.+.     +       --||.+|-+.||...+|+++||+
T Consensus       284 ~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fy  330 (361)
T KOG1006|consen  284 IGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFY  330 (361)
T ss_pred             cCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcCchh
Confidence            66665553321     1       25799999999999999999999

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=9.7e-36  Score=280.53  Aligned_cols=249  Identities=17%  Similarity=0.122  Sum_probs=172.4

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|||+.||.|++..++..||+|+.-.. ++...+.+.+|+++|++|+ |||||.+++..........+...+++.||||
T Consensus        46 AEGGFa~VYla~~~~~~~~~AlKrm~~~-de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC  124 (738)
T KOG1989|consen   46 AEGGFAQVYLAQDVKGGKKYALKRMYVN-DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYC  124 (738)
T ss_pred             ccCCcEEEEEEEecCCCceeeeeeeecC-CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhc
Confidence            4699999999999998899999997654 5677888999999999998 9999999995433221222234688999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-  161 (340)
                      .||+|-|++..+..   ..|+|.++++|+.|+++|+.+||.++.+|||||||-|||||+.+|+.||||||.|...-... 
T Consensus       125 ~gg~Lvd~mn~Rlq---~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~  201 (738)
T KOG1989|consen  125 KGGSLVDFMNTRLQ---TRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPT  201 (738)
T ss_pred             cCCcHHHHHHHHHh---ccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCc
Confidence            99999999997665   35999999999999999999999977889999999999999999999999999885322111 


Q ss_pred             C---------cceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHH
Q 019481          162 A---------DLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYL  232 (340)
Q Consensus       162 ~---------~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (340)
                      .         .....-|+.|.+|      |++  |+++ |+++   ....|+|.     +||+++.++-...||..--..
T Consensus       202 ~~~e~~~ve~eI~k~TTp~YRsP------EMI--Dlys-g~pI---~eKsDIWA-----LGclLYkLCy~t~PFe~sg~l  264 (738)
T KOG1989|consen  202 SAQEVNYVEEEIEKYTTPQYRSP------EMI--DLYS-GLPI---GEKSDIWA-----LGCLLYKLCYFTTPFEESGKL  264 (738)
T ss_pred             cHHHHHHHHHHHHhhCCccccCh------HHH--hhhc-CCCC---cchhHHHH-----HHHHHHHHHHhCCCcCcCcce
Confidence            0         0111236666666      533  3443 3332   12233355     555555554444444332222


Q ss_pred             HHHHHhhhhccccccC--cCC---ccccccccccCCCCchHHHHhhcCcce
Q 019481          233 LLIATLLSTITFLSAL--KIT---GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       233 ~~~~~~~~~~~~~~~~--~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      +     +....|.-++  +..   .++...||+.||++||++-+++.+-+.
T Consensus       265 a-----Ilng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~  310 (738)
T KOG1989|consen  265 A-----ILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFE  310 (738)
T ss_pred             e-----EEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHH
Confidence            0     0011111111  111   233557899999999998777665433

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=2.9e-35  Score=256.35  Aligned_cols=245  Identities=18%  Similarity=0.187  Sum_probs=173.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhh-HHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQL-RRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~-~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .+|+||+||++++..+++.||+|++........ .....+|+.++++++||||+++++++..       ..++++++|++
T Consensus         8 g~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-------~~~~~~v~~~~   80 (260)
T PF00069_consen    8 GSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD-------DNYLYIVMEYC   80 (260)
T ss_dssp             EEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-------SSEEEEEEEEE
T ss_pred             EeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-------ccccccccccc
Confidence            368999999999999999999999986443333 2344669999999999999999997753       44778999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceee-cccC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVS-AVEN  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~-~~~~  161 (340)
                      ++++|.+++.....     +++..+..++.||++||.+||+  ++|+||||||+||+++.+++++|+|||.+... ....
T Consensus        81 ~~~~L~~~l~~~~~-----~~~~~~~~~~~qi~~~L~~Lh~--~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~  153 (260)
T PF00069_consen   81 PGGSLQDYLQKNKP-----LSEEEILKIAYQILEALAYLHS--KGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNE  153 (260)
T ss_dssp             TTEBHHHHHHHHSS-----BBHHHHHHHHHHHHHHHHHHHH--TTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTS
T ss_pred             cccccccccccccc-----cccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccc
Confidence            99999999995554     9999999999999999999999  78999999999999999999999999999864 2233


Q ss_pred             CcceeeccceeeccCccc--cchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHH-HHHh
Q 019481          162 ADLTALDTSSVSAQSGKT--GMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLL-IATL  238 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~--~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~  238 (340)
                      ......++..|++|+...  ..-....|+|+.|...+.+.++..+|.  ..              .......... ....
T Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~--~~--------------~~~~~~~~~~~~~~~  217 (260)
T PF00069_consen  154 NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFE--ES--------------NSDDQLEIIEKILKR  217 (260)
T ss_dssp             EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSST--TS--------------SHHHHHHHHHHHHHT
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccc--cc--------------cchhhhhhhhhcccc
Confidence            334556788888886544  222223466766666655544442232  11              0000000000 0000


Q ss_pred             hhhccccccC---cCCccccccccccCCCCchHHHHhhcCcce
Q 019481          239 LSTITFLSAL---KITGCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       239 ~~~~~~~~~~---~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ..........   ..-..+...||+.||++||++.++++|||+
T Consensus       218 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  218 PLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             HHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             cccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence            0000000000   111223457899999999999999999996

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=6.2e-35  Score=261.19  Aligned_cols=250  Identities=14%  Similarity=0.074  Sum_probs=191.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      +||.+.||++.....+.++++|+.....+.+....+.+|+..|.+|+ |.+||+|++|-.       .++++|+|||+=+
T Consensus       371 ~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv-------~d~~lYmvmE~Gd  443 (677)
T KOG0596|consen  371 SGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEV-------TDGYLYMVMECGD  443 (677)
T ss_pred             CCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeec-------cCceEEEEeeccc
Confidence            45568999999876666566666656777888899999999999996 999999999654       3558999999864


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                       -+|.++|++....    ++.-.++.|..||+.|+.++|+  .||||.||||.|+|+- .|.+||+|||+|..+..+...
T Consensus       444 -~DL~kiL~k~~~~----~~~~~lk~ywkqML~aV~~IH~--~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTs  515 (677)
T KOG0596|consen  444 -IDLNKILKKKKSI----DPDWFLKFYWKQMLLAVKTIHQ--HGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTS  515 (677)
T ss_pred             -ccHHHHHHhccCC----CchHHHHHHHHHHHHHHHHHHH--hceeecCCCcccEEEE-eeeEEeeeechhcccCccccc
Confidence             4999999988762    4434899999999999999999  7799999999999995 689999999999988775543


Q ss_pred             ---ceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          164 ---LTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       164 ---~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                         .+.+||+.||+||.+.....-    --.+.+-...+...+.|+     +||+.++|.-|.+||.++.........+.
T Consensus       516 I~kdsQvGT~NYMsPEAl~~~~s~----~~~~~~k~Ki~r~SDvWS-----LGCILYqMvYgktPf~~~~n~~aKl~aI~  586 (677)
T KOG0596|consen  516 IVKDSQVGTVNYMSPEALTDMSSS----RENGKSKIKISRKSDVWS-----LGCILYQMVYGKTPFGQIINQIAKLHAIT  586 (677)
T ss_pred             eeeccccCcccccCHHHHhhcccc----ccCCCcceeecCccchhh-----hhhHHHHHHhcCCchHHHHHHHHHHHhhc
Confidence               467999999999654433322    012333334456667799     99999999999999999874432222221


Q ss_pred             hc-cccccCcCCccc-----cccccccCCCCchHHHHhhcCcce
Q 019481          241 TI-TFLSALKITGCK-----SEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       241 ~~-~~~~~~~~p~~~-----~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .- ..-+.|.+|...     -..||.|||.+||++.+||+|||+
T Consensus       587 ~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl  630 (677)
T KOG0596|consen  587 DPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFL  630 (677)
T ss_pred             CCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCccc
Confidence            11 112335555433     458999999999999999999999

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=2.2e-34  Score=254.69  Aligned_cols=242  Identities=13%  Similarity=0.041  Sum_probs=169.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||+||+|.+..+++.||+|.+....  .......+.+|++++++++|+||+++++.|.       ++...++++||
T Consensus         9 g~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-------~~~~~~lv~e~   81 (285)
T cd05632           9 GKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYE-------TKDALCLVLTI   81 (285)
T ss_pred             ecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEe-------cCCEEEEEEEe
Confidence            35899999999999999999999997522  1223455788999999999999999998664       33467899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+++...+.   ..+++..+..++.|++.||.|||+  ++|+||||||+||+++.++.+||+|||++.......
T Consensus        82 ~~~~~L~~~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~--~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~  156 (285)
T cd05632          82 MNGGDLKFHIYNMGN---PGFEEERALFYAAEILCGLEDLHR--ENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE  156 (285)
T ss_pred             ccCccHHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHh--CCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC
Confidence            999999998876443   349999999999999999999999  889999999999999999999999999998765444


Q ss_pred             CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      ......|+..|++|+...+.+.. ..|+|+.|...+.                     +.++..||..............
T Consensus       157 ~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~---------------------l~~g~~P~~~~~~~~~~~~~~~  215 (285)
T cd05632         157 SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYE---------------------MIEGQSPFRGRKEKVKREEVDR  215 (285)
T ss_pred             cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHH---------------------HHhCCCCCCCCCHHHHHHHHHH
Confidence            44455678888888543221111 1244444433333                     3333333321111000000000


Q ss_pred             hc---cccccCcCC---ccccccccccCCCCchH-----HHHhhcCcce
Q 019481          241 TI---TFLSALKIT---GCKSEEGYKNNSSLNPI-----CQIVNQHPFY  278 (340)
Q Consensus       241 ~~---~~~~~~~~p---~~~~~~~l~~dP~~R~t-----~~~ll~hp~~  278 (340)
                      .+   ...-.+..+   ..+...|++.||.+||+     ++++++|||+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~  264 (285)
T cd05632         216 RVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFF  264 (285)
T ss_pred             hhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhh
Confidence            00   000001111   22344689999999999     8899999999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=9.3e-35  Score=271.03  Aligned_cols=173  Identities=16%  Similarity=0.122  Sum_probs=136.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|...       ...+.+|+++|++++|||||++++++..       ....++++|++. 
T Consensus       179 ~G~~G~Vy~a~~~~~~~~vavK~~~-------~~~~~~E~~iL~~L~HpnIv~l~~~~~~-------~~~~~lv~e~~~-  243 (461)
T PHA03211        179 PGSEGCVFESSHPDYPQRVVVKAGW-------YASSVHEARLLRRLSHPAVLALLDVRVV-------GGLTCLVLPKYR-  243 (461)
T ss_pred             cCCCeEEEEEEECCCCCEEEEeccc-------ccCHHHHHHHHHHCCCCCCCcEEEEEEE-------CCEEEEEEEccC-
Confidence            5899999999999999999999653       1235789999999999999999996643       336678899985 


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC--
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA--  162 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~--  162 (340)
                      ++|.+++.....    .+++..++.++.||+.||.|||+  ++|+||||||+|||++.++.+||+|||+++.......  
T Consensus       244 ~~L~~~l~~~~~----~l~~~~~~~i~~qi~~aL~yLH~--~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~  317 (461)
T PHA03211        244 SDLYTYLGARLR----PLGLAQVTAVARQLLSAIDYIHG--EGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTP  317 (461)
T ss_pred             CCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHH--CCEEECcCCHHHEEECCCCCEEEcccCCceecccccccc
Confidence            699998876543    39999999999999999999999  8899999999999999999999999999987644321  


Q ss_pred             -cceeeccceeeccCccccchhh-hhHhHhCCcccccc
Q 019481          163 -DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDE  198 (340)
Q Consensus       163 -~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~  198 (340)
                       .....||..|++|+.+.+..+. ..|+|+.|+..+++
T Consensus       318 ~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El  355 (461)
T PHA03211        318 FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEA  355 (461)
T ss_pred             cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHH
Confidence             2235689999999744332222 23555555555544

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-34  Score=268.94  Aligned_cols=247  Identities=16%  Similarity=0.149  Sum_probs=202.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|.+|.||+++.+++++.+|+|+....  ....++++.|.++|+.. .|||++.+|++|.-...  ..++.+|+|||||.
T Consensus        29 ~Gtygkv~k~k~~~~~~~aa~kI~~~~--~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~--~~~DqLWLVMEfC~  104 (953)
T KOG0587|consen   29 NGTYGKVYKGRHVKTGQLAAIKIMDPT--EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDP--GNGDQLWLVMEFCG  104 (953)
T ss_pred             eccceeEEEEeeeecCceeeeEeecCC--ccccHHHHHHHHHHHhccCCCCcceEEEEEEEecC--CCCCeEEEEeeccC
Confidence            488999999999999999999999743  33456678889999887 59999999999975432  56668999999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-CC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-NA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~~  162 (340)
                      |||.-|+++....   ..+.|+.+..|++.++.|+.+||.  +.++|||||-.|||++.++.+||+|||++.++... ..
T Consensus       105 gGSVTDLVKn~~g---~rl~E~~IaYI~re~lrgl~HLH~--nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~gr  179 (953)
T KOG0587|consen  105 GGSVTDLVKNTKG---NRLKEEWIAYILREILRGLAHLHN--NKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGR  179 (953)
T ss_pred             CccHHHHHhhhcc---cchhhHHHHHHHHHHHHHHHHHhh--cceeeecccCceEEEeccCcEEEeeeeeeeeeeccccc
Confidence            9999999998764   679999999999999999999999  88999999999999999999999999999988764 44


Q ss_pred             cceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhc
Q 019481          163 DLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTI  242 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  242 (340)
                      ..+++||+.+|||      |++..+    -..-..+....|.|+     +|++..++..|.+|+-+.....    .+..|
T Consensus       180 RnT~iGtP~WMAP------EViac~----e~~d~tyd~R~D~Ws-----LGITaIEladG~PPl~DmHPmr----aLF~I  240 (953)
T KOG0587|consen  180 RNTFIGTPYWMAP------EVIACD----ESPDATYDYRSDLWS-----LGITAIEMAEGAPPLCDMHPMR----ALFLI  240 (953)
T ss_pred             ccCcCCCcccccc------eeeecc----cCCCCCcccccchhh-----ccceeehhcCCCCCccCcchhh----hhccC
Confidence            5688999999999      555433    223445566778899     9999999999999988877762    33444


Q ss_pred             cccccCcC--Cccc-------cccccccCCCCchHHHHhhcCccee
Q 019481          243 TFLSALKI--TGCK-------SEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       243 ~~~~~~~~--p~~~-------~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      .-..+|.+  |+.+       ...||.+|-.+||+..+|++|||+.
T Consensus       241 pRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~  286 (953)
T KOG0587|consen  241 PRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFIT  286 (953)
T ss_pred             CCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCccc
Confidence            44444444  2323       3378999999999999999999994

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=4.2e-34  Score=252.90  Aligned_cols=249  Identities=15%  Similarity=0.117  Sum_probs=172.1

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|.+..+++.||+|.+...........+.+|++++++++||||+++++.|..       .+..++++||++
T Consensus        10 g~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-------~~~~~lv~e~~~   82 (286)
T cd06622          10 GKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFI-------EGAVYMCMEYMD   82 (286)
T ss_pred             cccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheec-------CCeEEEEEeecC
Confidence            4689999999999999999999998754344445678899999999999999999997653       347789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +++|.+++.....  ...+++..+..++.|+++||.|||+. .+|+||||||+||+++.++.+||+|||++..+.... .
T Consensus        83 ~~~l~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~-~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-~  158 (286)
T cd06622          83 AGSLDKLYAGGVA--TEGIPEDVLRRITYAVVKGLKFLKEE-HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL-A  158 (286)
T ss_pred             CCCHHHHHHhccc--cCCCCHHHHHHHHHHHHHHHHHHHhc-CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc-c
Confidence            9999999876421  12489999999999999999999961 369999999999999999999999999997664322 2


Q ss_pred             ceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhcc
Q 019481          164 LTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTIT  243 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  243 (340)
                      .+..|+..|++|+.+.+...-.         ...+....+.|+     .|++..++.+|..||+....... ......+.
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~---------~~~~~~~~Diws-----lG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~  223 (286)
T cd06622         159 KTNIGCQSYMAPERIKSGGPNQ---------NPTYTVQSDVWS-----LGLSILEMALGRYPYPPETYANI-FAQLSAIV  223 (286)
T ss_pred             ccCCCccCccCcchhcCCCCCc---------cCCCCcccchHh-----HHHHHHHHHhCCCCCCCcchhhH-HHHHHHHh
Confidence            3345677788886443222100         000011122233     34444444444444322111100 00111122


Q ss_pred             ccccCcCCccc-------cccccccCCCCchHHHHhhcCcce
Q 019481          244 FLSALKITGCK-------SEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       244 ~~~~~~~p~~~-------~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ....+..|..+       -..|++.||++||++++++.|||+
T Consensus       224 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~  265 (286)
T cd06622         224 DGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWL  265 (286)
T ss_pred             hcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhh
Confidence            22223333322       346799999999999999999999

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=3.1e-34  Score=253.39  Aligned_cols=181  Identities=16%  Similarity=0.127  Sum_probs=138.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc-hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP-LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|++..+++.||+|.++.... ......+.+|++++++++||||++++++|.       +....++++||+
T Consensus         9 ~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~~   81 (284)
T cd07839           9 GEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLH-------SDKKLTLVFEYC   81 (284)
T ss_pred             cccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhc-------cCCceEEEEecC
Confidence            358899999999999999999999975322 223356788999999999999999999765       344678999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      + ++|.+.+.....    .+++..++.++.||++||.|||+  ++|+||||||+||+++.++++||+|||+++.......
T Consensus        82 ~-~~l~~~~~~~~~----~~~~~~~~~~~~qi~~al~~LH~--~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~  154 (284)
T cd07839          82 D-QDLKKYFDSCNG----DIDPEIVKSFMFQLLKGLAFCHS--HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR  154 (284)
T ss_pred             C-CCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHH--CCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC
Confidence            7 588888765433    38999999999999999999999  7799999999999999999999999999986544322


Q ss_pred             -cceeeccceeeccCccccchh--hhhHhHhCCcccccc
Q 019481          163 -DLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDE  198 (340)
Q Consensus       163 -~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~  198 (340)
                       .....++..|++|+.+.+...  ...|+|+.|...+.+
T Consensus       155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l  193 (284)
T cd07839         155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL  193 (284)
T ss_pred             CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHH
Confidence             223456777888864332111  123555555444444

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=5.1e-34  Score=254.31  Aligned_cols=185  Identities=14%  Similarity=0.077  Sum_probs=145.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|++..+++.||+|.++..........+.+|++++++++||||++++++|.       +....++++||++
T Consensus        15 g~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~-------~~~~~~lv~e~~~   87 (301)
T cd07873          15 GEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH-------TEKSLTLVFEYLD   87 (301)
T ss_pred             ccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEe-------cCCeEEEEEeccc
Confidence            368999999999999999999999975443334456788999999999999999999765       3447889999997


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC-
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA-  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~-  162 (340)
                       ++|.+.+.....    .+++..+..++.||++||+|||+  ++|+||||||+||+++.++.+||+|||+++....... 
T Consensus        88 -~~l~~~l~~~~~----~~~~~~~~~~~~qi~~aL~~lH~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~  160 (301)
T cd07873          88 -KDLKQYLDDCGN----SINMHNVKLFLFQLLRGLNYCHR--RKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT  160 (301)
T ss_pred             -cCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHh--CCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCc
Confidence             599998876543    38999999999999999999999  8899999999999999999999999999976543221 


Q ss_pred             cceeeccceeeccCccccchh--hhhHhHhCCcccccccccc
Q 019481          163 DLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~~  202 (340)
                      .....+++.|++|+...+...  ...|+|+.|...+.+.++.
T Consensus       161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~  202 (301)
T cd07873         161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGR  202 (301)
T ss_pred             ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCC
Confidence            223456777888864432111  1346666666666655544

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=1.7e-34  Score=260.31  Aligned_cols=186  Identities=13%  Similarity=0.082  Sum_probs=141.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||+||+++++.+++.||+|.++... .....+.+.+|+++++.++||||++++++|..       +...++++||++
T Consensus        10 ~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~-------~~~~~lv~e~~~   82 (327)
T cd08227          10 FEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIA-------DNELWVVTSFMA   82 (327)
T ss_pred             ccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEE-------CCEEEEEEeccC
Confidence            4589999999999999999999997532 23445667889999999999999999997753       346789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC-
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA-  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~-  162 (340)
                      +|+|.+++.....   ..+++..++.++.|++.||+|||+  ++|+||||||+|||++.++.++++||+.+........ 
T Consensus        83 ~~~l~~~~~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~--~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~  157 (327)
T cd08227          83 YGSAKDLICTHFM---DGMSELAIAYILQGVLKALDYIHH--MGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR  157 (327)
T ss_pred             CCcHHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHH--CCEecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence            9999999976433   248999999999999999999999  7899999999999999999999999986543322111 


Q ss_pred             -------cceeeccceeeccCccccc--hh-hhhHhHhCCcccccccccc
Q 019481          163 -------DLTALDTSSVSAQSGKTGM--EM-KMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 -------~~~~~gt~~~~~p~~~~~~--~~-~~~~~~s~g~~~~~~~~~~  202 (340)
                             .....++..|++|+.+.+.  .+ ...|+|+.|...+.+.++.
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~  207 (327)
T cd08227         158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGH  207 (327)
T ss_pred             ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCC
Confidence                   1122455667777544321  11 1246666665555554433

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=2.1e-34  Score=255.36  Aligned_cols=233  Identities=15%  Similarity=0.097  Sum_probs=170.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||++.+..+++.||+|++....  .....+.+.+|++++++++||||+++++++.       +....++++||
T Consensus        10 g~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~~v~e~   82 (290)
T cd05580          10 GTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQ-------DDSNLYLVMEY   82 (290)
T ss_pred             ecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEE-------cCCeEEEEEec
Confidence            35889999999999999999999987422  2234566889999999999999999999664       44478899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++++|.+++.....     +++..+..++.|+++||.|||+  ++|+||||||+||+++.++.+||+|||+++..... 
T Consensus        83 ~~~~~L~~~~~~~~~-----l~~~~~~~~~~qil~~l~~lH~--~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~-  154 (290)
T cd05580          83 VPGGELFSHLRKSGR-----FPEPVARFYAAQVVLALEYLHS--LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR-  154 (290)
T ss_pred             CCCCCHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-
Confidence            999999999988765     9999999999999999999999  78999999999999999999999999999876544 


Q ss_pred             CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                       ....+|++.|++|+.+.+.+.. ..|+|+.|...+.+..+.                     .+|............ .
T Consensus       155 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~---------------------~p~~~~~~~~~~~~~-~  211 (290)
T cd05580         155 -TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGY---------------------PPFFDDNPIQIYEKI-L  211 (290)
T ss_pred             -CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCC---------------------CCCCCCCHHHHHHHH-h
Confidence             3345678888888644322211 124555444444443332                     222111100000000 0


Q ss_pred             hccccccCcCCc-------cccccccccCCCCch-----HHHHhhcCcce
Q 019481          241 TITFLSALKITG-------CKSEEGYKNNSSLNP-----ICQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~~~~~p~-------~~~~~~l~~dP~~R~-----t~~~ll~hp~~  278 (340)
                          ...+.+|.       .+...|++.||.+|+     +++++++|||+
T Consensus       212 ----~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~  257 (290)
T cd05580         212 ----EGKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWF  257 (290)
T ss_pred             ----cCCccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCccc
Confidence                11111221       234478999999999     89999999999

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=6.8e-34  Score=248.97  Aligned_cols=237  Identities=17%  Similarity=0.159  Sum_probs=169.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|++..+++.||+|+++... ......+.+|+.+++.++||||+++++++.       +....++++||++
T Consensus        18 g~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~-------~~~~~~lv~e~~~   89 (267)
T cd06645          18 GSGTYGDVYKARNVNTGELAAIKVIKLEP-GEDFAVVQQEIIMMKDCKHSNIVAYFGSYL-------RRDKLWICMEFCG   89 (267)
T ss_pred             CCCCCeEEEEEEEcCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhCCCCCeeeEEEEEE-------eCCEEEEEEeccC
Confidence            46899999999999999999999987543 233456788999999999999999999664       3447789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-C
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-A  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~  162 (340)
                      +++|.+++...+.     +++.+++.++.|++.||+|||+  .+++||||||+||+++.++.+||+|||++....... .
T Consensus        90 ~~~L~~~~~~~~~-----~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~  162 (267)
T cd06645          90 GGSLQDIYHVTGP-----LSESQIAYVSRETLQGLYYLHS--KGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAK  162 (267)
T ss_pred             CCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccc
Confidence            9999999987665     9999999999999999999999  789999999999999999999999999997664322 2


Q ss_pred             cceeeccceeeccCcccc----chhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHh
Q 019481          163 DLTALDTSSVSAQSGKTG----MEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATL  238 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~----~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (340)
                      .....|+..|+||+....    .--...|+|+.|+..+.+.+                     +..+|............
T Consensus       163 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~---------------------~~~p~~~~~~~~~~~~~  221 (267)
T cd06645         163 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAE---------------------LQPPMFDLHPMRALFLM  221 (267)
T ss_pred             cccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhc---------------------CCCCcccccchhhHHhh
Confidence            234467888888864320    01112355555554444433                     32222111000000000


Q ss_pred             hhhcccccc-----CcCC---ccccccccccCCCCchHHHHhhcCcc
Q 019481          239 LSTITFLSA-----LKIT---GCKSEEGYKNNSSLNPICQIVNQHPF  277 (340)
Q Consensus       239 ~~~~~~~~~-----~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~  277 (340)
                       ........     ...+   ..+...|+++||.+||+++++++|||
T Consensus       222 -~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         222 -TKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             -hccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence             00000000     0111   12344789999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.5e-34  Score=283.20  Aligned_cols=248  Identities=11%  Similarity=0.043  Sum_probs=172.4

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|++... ........+.+|+.++++++|||||+++++|..     .+...+|++|||++
T Consensus        23 ~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~d-----e~~~~lyIVMEY~~   97 (1021)
T PTZ00266         23 NGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLN-----KANQKLYILMEFCD   97 (1021)
T ss_pred             cCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEe-----cCCCEEEEEEeCCC
Confidence            689999999999999999999999753 233455678999999999999999999997742     23447889999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCC-----CceecCCCCCCcEEecC----------------
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSE-----KQVIYRDFKAPNILLDE----------------  142 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~-----~~iiHrDlKp~NILl~~----------------  142 (340)
                      +|+|.++|...... ...+++..++.|+.||+.||+|||+.+     ++|+||||||+||||+.                
T Consensus        98 gGSL~~lL~k~~~~-~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~n  176 (1021)
T PTZ00266         98 AGDLSRNIQKCYKM-FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLN  176 (1021)
T ss_pred             CCcHHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccC
Confidence            99999999763210 124999999999999999999999822     34999999999999964                


Q ss_pred             -CCceEEeccccceeecccCCcceeeccceeeccCccccch--h-hhhHhHhCCccccccccccccCCCCCCcccccCCC
Q 019481          143 -TFKCNLSDFSTAKVSAVENADLTALDTSSVSAQSGKTGME--M-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPN  218 (340)
Q Consensus       143 -~~~~kl~DFGla~~~~~~~~~~~~~gt~~~~~p~~~~~~~--~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (340)
                       .+.+||+|||+++.+..........||+.|+||+.+.+-.  + ...|+|+.|+.++.+.+                  
T Consensus       177 g~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLT------------------  238 (1021)
T PTZ00266        177 GRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCS------------------  238 (1021)
T ss_pred             CCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHH------------------
Confidence             2348999999998776554445567899898886442211  0 12355555555544443                  


Q ss_pred             ccCCchhHHHHHHHHHHHHhhhhccccccCcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          219 LKTENETWNNFLYLLLIATLLSTITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       219 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                         +..||.....................+..+   ..+...||+.||.+||++.+++.|||+.
T Consensus       239 ---Gk~PF~~~~~~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik  299 (1021)
T PTZ00266        239 ---GKTPFHKANNFSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIK  299 (1021)
T ss_pred             ---CCCCCCcCCcHHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHh
Confidence               333332111100000000000000000111   1234478999999999999999999993

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=5e-34  Score=251.58  Aligned_cols=240  Identities=15%  Similarity=0.123  Sum_probs=167.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|++..+++.||+|++.........+.+.+|++++++++||||++++++|..       .+..++++||++
T Consensus        10 g~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~~~lv~e~~~   82 (279)
T cd06619          10 GHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFV-------ENRISICTEFMD   82 (279)
T ss_pred             ccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE-------CCEEEEEEecCC
Confidence            3688999999999999999999999764444455678899999999999999999997753       335679999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +|+|..+.    .     +++..+..++.|++.||+|||+  .+|+|+||||+|||++.++.+||+|||++...... ..
T Consensus        83 ~~~l~~~~----~-----~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~-~~  150 (279)
T cd06619          83 GGSLDVYR----K-----IPEHVLGRIAVAVVKGLTYLWS--LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS-IA  150 (279)
T ss_pred             CCChHHhh----c-----CCHHHHHHHHHHHHHHHHHHHH--CCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc-cc
Confidence            99996542    2     7889999999999999999999  78999999999999999999999999999876443 23


Q ss_pred             ceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhc
Q 019481          164 LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTI  242 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  242 (340)
                      ....||..|++|+...+.+.. ..|+|+.|...+.+.++.  .||.......       +.........    +     +
T Consensus       151 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~--~pf~~~~~~~-------~~~~~~~~~~----~-----~  212 (279)
T cd06619         151 KTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGR--FPYPQIQKNQ-------GSLMPLQLLQ----C-----I  212 (279)
T ss_pred             cCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCC--CCchhhcccc-------cccchHHHHH----H-----H
Confidence            345788889988644322211 234555444444443332  2221100000       0000000000    0     0


Q ss_pred             cccccCc-----CC---ccccccccccCCCCchHHHHhhcCcceee
Q 019481          243 TFLSALK-----IT---GCKSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       243 ~~~~~~~-----~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                      .-...+.     .+   .++...|+++||.+||+++++++|||+..
T Consensus       213 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~  258 (279)
T cd06619         213 VDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQ  258 (279)
T ss_pred             hccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccccc
Confidence            0000111     11   12344789999999999999999999943

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=2.8e-34  Score=270.84  Aligned_cols=180  Identities=12%  Similarity=0.140  Sum_probs=136.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCC------ccccccccccccccccCCcceeeee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHP------NQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hp------nIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      .|+||.||+|++..+++.||+|+++..  .........|+++++.++|.      +|++++++|..      +..+.+++
T Consensus       139 ~G~fg~V~~a~~~~~~~~vAvK~i~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~------~~~~~~iv  210 (467)
T PTZ00284        139 EGTFGKVVEAWDRKRKEYCAVKIVRNV--PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN------ETGHMCIV  210 (467)
T ss_pred             eccCEEEEEEEEcCCCeEEEEEEEecc--hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc------CCceEEEE
Confidence            689999999999999999999999642  22334456788888777654      57888887753      23356788


Q ss_pred             eccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCC-ceecCCCCCCcEEecCCC-------------
Q 019481           79 KWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEK-QVIYRDFKAPNILLDETF-------------  144 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~-~iiHrDlKp~NILl~~~~-------------  144 (340)
                      +|++ +++|.+++.+.+.     +++..+..++.||+.||+|||+  + +|+||||||+|||++.++             
T Consensus       211 ~~~~-g~~l~~~l~~~~~-----l~~~~~~~i~~qi~~aL~yLH~--~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~  282 (467)
T PTZ00284        211 MPKY-GPCLLDWIMKHGP-----FSHRHLAQIIFQTGVALDYFHT--ELHLMHTDLKPENILMETSDTVVDPVTNRALPP  282 (467)
T ss_pred             Eecc-CCCHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHh--cCCeecCCCCHHHEEEecCCcccccccccccCC
Confidence            9988 7799999987665     9999999999999999999997  4 699999999999998765             


Q ss_pred             ---ceEEeccccceeecccCCcceeeccceeeccCccccchhhh-hHhHhCCcccccccccc
Q 019481          145 ---KCNLSDFSTAKVSAVENADLTALDTSSVSAQSGKTGMEMKM-AQLESGGWRAHDEAEKA  202 (340)
Q Consensus       145 ---~~kl~DFGla~~~~~~~~~~~~~gt~~~~~p~~~~~~~~~~-~~~~s~g~~~~~~~~~~  202 (340)
                         .+||+|||.+....  ......+||+.|+|||.+.+.++.. .|+|+.|+..+++.++.
T Consensus       283 ~~~~vkl~DfG~~~~~~--~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~  342 (467)
T PTZ00284        283 DPCRVRICDLGGCCDER--HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGK  342 (467)
T ss_pred             CCceEEECCCCccccCc--cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCC
Confidence               49999999886432  2334568999999997554433322 36666666665554443

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=4.8e-34  Score=250.57  Aligned_cols=245  Identities=16%  Similarity=0.137  Sum_probs=171.1

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|.+..+++.||+|+++...  .....+.+|+.+++++ +||||++++++|..... ......+++++||+
T Consensus        15 g~g~~g~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~-~~~~~~~~iv~e~~   91 (272)
T cd06637          15 GNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP-PGMDDQLWLVMEFC   91 (272)
T ss_pred             eecCCeEEEEEEEcCCCcEEEEEEEEcCC--ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCC-CCCCcEEEEEEEcC
Confidence            35889999999999999999999997432  3345688999999998 69999999998764321 11234688999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-C
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-N  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~  161 (340)
                      ++|+|.+++.....   ..+++..+..++.|++.||+|||+  ++|+||||||+||++++++.+||+|||+++..... .
T Consensus        92 ~~~~L~~~l~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~--~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~  166 (272)
T cd06637          92 GAGSVTDLIKNTKG---NTLKEEWIAYICREILRGLSHLHQ--HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG  166 (272)
T ss_pred             CCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHH--CCCccCCCCHHHEEECCCCCEEEccCCCceecccccc
Confidence            99999999987442   348999999999999999999999  78999999999999999999999999999876543 2


Q ss_pred             CcceeeccceeeccCccccch------hhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHH
Q 019481          162 ADLTALDTSSVSAQSGKTGME------MKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLI  235 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~------~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (340)
                      ...+..|+..|++|+.+.+-+      -...|+|+.|...+.                     +.+|..++.........
T Consensus       167 ~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~e---------------------l~~g~~p~~~~~~~~~~  225 (272)
T cd06637         167 RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIE---------------------MAEGAPPLCDMHPMRAL  225 (272)
T ss_pred             cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHH---------------------HHhCCCCccccCHHHHH
Confidence            233456788788885442110      012344444444433                     33333333221111000


Q ss_pred             HHhhhhccccc--cCcCC---ccccccccccCCCCchHHHHhhcCcce
Q 019481          236 ATLLSTITFLS--ALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       236 ~~~~~~~~~~~--~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ... .......  ....+   .++...|+..||.+|||++++++|||+
T Consensus       226 ~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         226 FLI-PRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             HHH-hcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            000 0000000  01111   123447899999999999999999996

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=2.7e-34  Score=253.79  Aligned_cols=237  Identities=14%  Similarity=0.096  Sum_probs=163.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|++|.||+|.+  +++.||+|.++...  .....+.+.+|+++|++++||||++++++|.+.   .++..+.++++||
T Consensus        29 ~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~---~~~~~~~~lv~Ey  103 (283)
T PHA02988         29 KENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDI---VDDLPRLSLILEY  103 (283)
T ss_pred             eeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEec---ccCCCceEEEEEe
Confidence            3688999999997  57899999997532  222346788999999999999999999977531   1233467899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+++.....     +++.....++.|++.||.|||+. .+++||||||+|||++.++.+||+|||+++..... 
T Consensus       104 ~~~g~L~~~l~~~~~-----~~~~~~~~i~~~i~~~l~~lH~~-~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~-  176 (283)
T PHA02988        104 CTRGYLREVLDKEKD-----LSFKTKLDMAIDCCKGLYNLYKY-TNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP-  176 (283)
T ss_pred             CCCCcHHHHHhhCCC-----CChhHHHHHHHHHHHHHHHHHhc-CCCCCCcCChhhEEECCCCcEEEcccchHhhhccc-
Confidence            999999999988665     89999999999999999999982 25899999999999999999999999999865432 


Q ss_pred             CcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                       .....|+..|+||+...+..           ..  +....+.|+     .|++..++.+|..||............   
T Consensus       177 -~~~~~~~~~y~aPE~~~~~~-----------~~--~~~k~Di~S-----lGvil~el~~g~~Pf~~~~~~~~~~~i---  234 (283)
T PHA02988        177 -PFKNVNFMVYFSYKMLNDIF-----------SE--YTIKDDIYS-----LGVVLWEIFTGKIPFENLTTKEIYDLI---  234 (283)
T ss_pred             -cccccCcccccCHHHhhhcc-----------cc--ccchhhhhH-----HHHHHHHHHHCCCCCCCCCHHHHHHHH---
Confidence             23445777788875332100           00  111222244     444444444444444332111100000   


Q ss_pred             ccccccCcCC----c---cccccccccCCCCchHHHHhhc
Q 019481          242 ITFLSALKIT----G---CKSEEGYKNNSSLNPICQIVNQ  274 (340)
Q Consensus       242 ~~~~~~~~~p----~---~~~~~~l~~dP~~R~t~~~ll~  274 (340)
                      +.....+..|    .   ++-..||+.||.+|||++++++
T Consensus       235 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~  274 (283)
T PHA02988        235 INKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILY  274 (283)
T ss_pred             HhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence            0111112222    1   2344789999999999998865

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=6.4e-34  Score=249.12  Aligned_cols=239  Identities=17%  Similarity=0.163  Sum_probs=168.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC----chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT----PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      ..|+||.||+|.+..+++.||+|.+....    ..+..+.+.+|++++++++||||+++++.+...     .....++++
T Consensus        11 g~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~~~l~~   85 (266)
T cd06651          11 GQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDR-----AEKTLTIFM   85 (266)
T ss_pred             cCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcC-----CCCEEEEEE
Confidence            46899999999999999999999986421    123346688999999999999999999966421     234678999


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      ||+++++|.+.+.....     +++...+.++.|++.||+|||+  .+|+||||||+||+++.++.+||+|||+++.+..
T Consensus        86 e~~~~~~L~~~l~~~~~-----l~~~~~~~~~~qi~~~l~~LH~--~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~  158 (266)
T cd06651          86 EYMPGGSVKDQLKAYGA-----LTESVTRKYTRQILEGMSYLHS--NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT  158 (266)
T ss_pred             eCCCCCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCeeeCCCCHHHEEECCCCCEEEccCCCcccccc
Confidence            99999999999987655     8999999999999999999999  7799999999999999999999999999976543


Q ss_pred             cC----CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHH
Q 019481          160 EN----ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLL  234 (340)
Q Consensus       160 ~~----~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (340)
                      ..    ......++..|++|+.+.+.+.. ..|+                |+     .|++..++.+|..+|........
T Consensus       159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv----------------~s-----lG~i~~el~~g~~pf~~~~~~~~  217 (266)
T cd06651         159 ICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADV----------------WS-----LGCTVVEMLTEKPPWAEYEAMAA  217 (266)
T ss_pred             ccccCCccccCCccccccCHHHhCCCCCCchhhh----------------HH-----HHHHHHHHHHCCCCccccchHHH
Confidence            11    11223466667777533221110 1233                43     44444444444444433222111


Q ss_pred             HHHhhhhccccccCcCCccccc------cccccCCCCchHHHHhhcCcce
Q 019481          235 IATLLSTITFLSALKITGCKSE------EGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       235 ~~~~~~~~~~~~~~~~p~~~~~------~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ....   ......+.+|....+      .|+..||++||+++++++|||+
T Consensus       218 ~~~~---~~~~~~~~~~~~~~~~~~~li~~~~~~p~~Rp~~~eil~hp~~  264 (266)
T cd06651         218 IFKI---ATQPTNPQLPSHISEHARDFLGCIFVEARHRPSAEELLRHPFA  264 (266)
T ss_pred             HHHH---hcCCCCCCCchhcCHHHHHHHHHhcCChhhCcCHHHHhcCccc
Confidence            1111   111112333322211      4677899999999999999998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=5.6e-34  Score=257.48  Aligned_cols=160  Identities=14%  Similarity=0.046  Sum_probs=133.4

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+++++.+++.+|+|++.+..  .......+.+|+.++..++|+||+++++.|.       +....+++|||
T Consensus        10 G~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-------~~~~~~lv~ey   82 (332)
T cd05623          10 GRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQ-------DENNLYLVMDY   82 (332)
T ss_pred             EeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEe-------cCCEEEEEEec
Confidence            36899999999999999999999997421  1223345788999999999999999999665       34477899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+++.+...    .+++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++......
T Consensus        83 ~~~g~L~~~l~~~~~----~l~~~~~~~~~~qi~~al~~lH~--~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~  156 (332)
T cd05623          83 YVGGDLLTLLSKFED----RLPEDMARFYLAEMVIAIDSVHQ--LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG  156 (332)
T ss_pred             cCCCcHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence            999999999987443    38999999999999999999999  889999999999999999999999999997654432


Q ss_pred             C--cceeeccceeeccC
Q 019481          162 A--DLTALDTSSVSAQS  176 (340)
Q Consensus       162 ~--~~~~~gt~~~~~p~  176 (340)
                      .  ....+||+.|++||
T Consensus       157 ~~~~~~~~gt~~y~aPE  173 (332)
T cd05623         157 TVQSSVAVGTPDYISPE  173 (332)
T ss_pred             cceecccccCccccCHH
Confidence            2  22356888888884

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=1.7e-33  Score=245.76  Aligned_cols=242  Identities=17%  Similarity=0.119  Sum_probs=173.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .+|+||.||+|.+..+++.||+|.++.. ......+.+.+|++++++++||||+++++++..     .+....++++||+
T Consensus         9 g~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~~~~~~e~~   83 (265)
T cd08217           9 GKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIID-----RSNQTLYIVMEYC   83 (265)
T ss_pred             ccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeec-----CCCCEEEEEehhc
Confidence            4689999999999999999999998752 234455678899999999999999999986642     2444678999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhh-----cCCCceecCCCCCCcEEecCCCceEEeccccceee
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLH-----SSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVS  157 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH-----~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~  157 (340)
                      ++++|.+++..... ....+++..++.++.||+.||.|||     +  .+++|+||||+||+++.++.+||+|||++...
T Consensus        84 ~~~~L~~~l~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~--~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~  160 (265)
T cd08217          84 EGGDLAQLIQKCKK-ERKYIEEEFIWRILTQLLLALYECHNRSDPG--NTVLHRDLKPANIFLDANNNVKLGDFGLAKIL  160 (265)
T ss_pred             cCCCHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhcCcccc--CcceecCCCHHHEEEecCCCEEEecccccccc
Confidence            99999999976421 1134899999999999999999999     7  77999999999999999999999999999877


Q ss_pred             cccCC-cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHH
Q 019481          158 AVENA-DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLI  235 (340)
Q Consensus       158 ~~~~~-~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (340)
                      ..... .....|+..|++|+.+.+.... ..|+|+.|...+.+..+.  .|+......              ...     
T Consensus       161 ~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~--~p~~~~~~~--------------~~~-----  219 (265)
T cd08217         161 GHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALS--PPFTARNQL--------------QLA-----  219 (265)
T ss_pred             cCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCC--CcccCcCHH--------------HHH-----
Confidence            65443 3345678888888654332221 235555555544443332  222111100              000     


Q ss_pred             HHhhhhccccccCcCCc-------cccccccccCCCCchHHHHhhcCcce
Q 019481          236 ATLLSTITFLSALKITG-------CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       236 ~~~~~~~~~~~~~~~p~-------~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                          ..+.....+.+|.       .+...|++.||++||+++++++|||+
T Consensus       220 ----~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         220 ----SKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             ----HHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence                0011111122222       22447799999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=4.6e-34  Score=254.96  Aligned_cols=186  Identities=13%  Similarity=0.089  Sum_probs=137.5

Q ss_pred             CCCcceEEEEEEcCC----------------CCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCcccccccccccccc
Q 019481            4 SAPSFSVLIHVPFPD----------------DRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNIC   67 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~----------------~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~   67 (340)
                      ..|+||.||+|.+..                ++..||+|++...........+.+|++++++++||||++++++|..   
T Consensus        14 g~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~---   90 (304)
T cd05096          14 GEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVD---   90 (304)
T ss_pred             cccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEec---
Confidence            369999999998533                3457999999765445556779999999999999999999997653   


Q ss_pred             ccCCcceeeeeeccccCCCHHHHhcccCCC--------------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCC
Q 019481           68 LTGDRRYCWKNKWLMQKKGLENVHIGEHPA--------------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDF  133 (340)
Q Consensus        68 ~~~~~~~~~~~~e~~~~gsL~~~l~~~~~~--------------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDl  133 (340)
                          ....++++||+++|+|.+++......              ....+++..+..++.||+.||+|||+  .+|+||||
T Consensus        91 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~--~~ivH~dl  164 (304)
T cd05096          91 ----EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS--LNFVHRDL  164 (304)
T ss_pred             ----CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH--CCccccCc
Confidence                23567999999999999998654210              01237888999999999999999999  77999999


Q ss_pred             CCCcEEecCCCceEEeccccceeecccCC---cceeeccceeeccCccccchh-hhhHhHhCCcccccc
Q 019481          134 KAPNILLDETFKCNLSDFSTAKVSAVENA---DLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDE  198 (340)
Q Consensus       134 Kp~NILl~~~~~~kl~DFGla~~~~~~~~---~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~  198 (340)
                      ||+|||++.++.+||+|||+++.......   .....++..|++|+.+.+-.+ ...|+|+.|...+.+
T Consensus       165 kp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el  233 (304)
T cd05096         165 ATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEI  233 (304)
T ss_pred             chhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHH
Confidence            99999999999999999999986644321   112233556777753221111 123555555555444

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=9.7e-34  Score=255.78  Aligned_cols=197  Identities=14%  Similarity=0.047  Sum_probs=150.1

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc--CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI--TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||++++..+++.||+|++++.  ......+.+.+|..++..++|+||++++++|.       +.++.+++|||
T Consensus        10 G~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~-------~~~~~~lv~Ey   82 (331)
T cd05624          10 GRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQ-------DENYLYLVMDY   82 (331)
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-------cCCEEEEEEeC
Confidence            3689999999999999999999999742  12233455788999999999999999999665       44578899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      ++||+|.+++.....    .+++..+..++.|++.||+|||+  ++|+||||||+|||++.++.+||+|||+++......
T Consensus        83 ~~gg~L~~~l~~~~~----~l~~~~~~~~~~qi~~~L~~lH~--~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~  156 (331)
T cd05624          83 YVGGDLLTLLSKFED----RLPEDMARFYIAEMVLAIHSIHQ--LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG  156 (331)
T ss_pred             CCCCcHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH--CCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence            999999999987433    38999999999999999999999  889999999999999999999999999998765433


Q ss_pred             Cc--ceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHH
Q 019481          162 AD--LTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNN  228 (340)
Q Consensus       162 ~~--~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (340)
                      ..  ...+||+.|+||+.+.+...        +...  +....+.|+     .|++..++.+|..||..
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~--------~~~~--~~~~~DiwS-----lGvil~ell~g~~Pf~~  210 (331)
T cd05624         157 TVQSSVAVGTPDYISPEILQAMED--------GMGK--YGPECDWWS-----LGVCMYEMLYGETPFYA  210 (331)
T ss_pred             ceeeccccCCcccCCHHHHhcccc--------CCCC--CCCcccEEe-----eehhhhhhhhCCCCccC
Confidence            22  23468888888853321100        0001  111234466     66666666666666643

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=4.3e-34  Score=249.53  Aligned_cols=239  Identities=17%  Similarity=0.113  Sum_probs=173.4

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|++..+++.||+|++....  .....+.+.+|++++++++||||+++++++.       +....++++||
T Consensus         2 g~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~   74 (262)
T cd05572           2 GVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFK-------DKKYIYMLMEY   74 (262)
T ss_pred             CCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEE-------cCCccEEEEec
Confidence            36789999999999999999999997532  2234567899999999999999999999664       34467899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++++|.+++.+...     +++..+..++.||++||+|||+  ++++|+||||+||+++.++.+||+|||+++......
T Consensus        75 ~~~~~L~~~l~~~~~-----l~~~~~~~~~~~i~~~l~~lH~--~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~  147 (262)
T cd05572          75 CLGGELWTILRDRGL-----FDEYTARFYIACVVLAFEYLHN--RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ  147 (262)
T ss_pred             CCCCcHHHHHhhcCC-----CCHHHHHHHHHHHHHHHHHHhh--CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc
Confidence            999999999987655     8999999999999999999999  779999999999999999999999999998776554


Q ss_pred             CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      ......|++.|++|+.+.+.+.. ..|+|+.|...+.+..+.  .|+.....           .+.......     .  
T Consensus       148 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~--~p~~~~~~-----------~~~~~~~~~-----~--  207 (262)
T cd05572         148 KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGR--PPFGEDDE-----------DPMEIYNDI-----L--  207 (262)
T ss_pred             ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCC--CCcCCCCC-----------CHHHHHHHH-----h--
Confidence            44455678888888644332221 235555554444443332  22221110           000000000     0  


Q ss_pred             hccccccCcCCc-------cccccccccCCCCchH-----HHHhhcCcce
Q 019481          241 TITFLSALKITG-------CKSEEGYKNNSSLNPI-----CQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~~~~~p~-------~~~~~~l~~dP~~R~t-----~~~ll~hp~~  278 (340)
                        .....+..|.       .+-..|+++||.+||+     ++++++|||+
T Consensus       208 --~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~  255 (262)
T cd05572         208 --KGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWF  255 (262)
T ss_pred             --ccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhh
Confidence              0011111121       2344789999999999     9999999999

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=6e-34  Score=251.64  Aligned_cols=186  Identities=18%  Similarity=0.113  Sum_probs=143.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc-hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP-LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      +.|+||.||+|++..+++.||+|.+..... ....+.+.+|+.++++++||||+++++++.       ++...++++||+
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~~v~e~~   81 (285)
T cd07861           9 GEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLM-------QESRLYLIFEFL   81 (285)
T ss_pred             cccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEe-------eCCeEEEEEecC
Confidence            468899999999999999999999875322 223466789999999999999999999765       344778999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      + ++|.+++.....  +..+++..++.++.||++||+|||+  ++|+||||||+||+++.++.+||+|||+++.......
T Consensus        82 ~-~~l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  156 (285)
T cd07861          82 S-MDLKKYLDSLPK--GQYMDAELVKSYLYQILQGILFCHS--RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR  156 (285)
T ss_pred             C-CCHHHHHhcCCC--CCcCCHHHHHHHHHHHHHHHHHHHh--CCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcc
Confidence            7 689888876442  1348999999999999999999999  8899999999999999999999999999976543221


Q ss_pred             -cceeeccceeeccCccccch--hhhhHhHhCCccccccccc
Q 019481          163 -DLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEK  201 (340)
Q Consensus       163 -~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~  201 (340)
                       .....+++.|++|+.+.+..  -...|+|+.|...+.+.++
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg  198 (285)
T cd07861         157 VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATK  198 (285)
T ss_pred             cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHC
Confidence             22335677788886443211  1234666666666555443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5e-36  Score=265.60  Aligned_cols=158  Identities=20%  Similarity=0.166  Sum_probs=145.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeec--cCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHEL--ITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~--~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      -||||+|-++........+|+|++++  ..+....+.+..|-+||..++.|.||++|.+|.       |..|+|+.||-|
T Consensus       430 vGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfr-------d~kyvYmLmEaC  502 (732)
T KOG0614|consen  430 VGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFR-------DSKYVYMLMEAC  502 (732)
T ss_pred             cCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhc-------cchhhhhhHHhh
Confidence            38999999999877666799999986  334455677889999999999999999999775       556899999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      -||.|...+++++.     +++.+++.++..+++|++|||+  ++||+|||||+|.++|.+|-+||.|||.|+.+..+.+
T Consensus       503 lGGElWTiLrdRg~-----Fdd~tarF~~acv~EAfeYLH~--k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~K  575 (732)
T KOG0614|consen  503 LGGELWTILRDRGS-----FDDYTARFYVACVLEAFEYLHR--KGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRK  575 (732)
T ss_pred             cCchhhhhhhhcCC-----cccchhhhhHHHHHHHHHHHHh--cCceeccCChhheeeccCCceEEeehhhHHHhccCCc
Confidence            99999999999988     9999999999999999999999  8899999999999999999999999999999999999


Q ss_pred             cceeeccceeeccC
Q 019481          163 DLTALDTSSVSAQS  176 (340)
Q Consensus       163 ~~~~~gt~~~~~p~  176 (340)
                      +.|+||||.|.||+
T Consensus       576 TwTFcGTpEYVAPE  589 (732)
T KOG0614|consen  576 TWTFCGTPEYVAPE  589 (732)
T ss_pred             eeeecCCcccccch
Confidence            99999999999995

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=5.9e-35  Score=244.79  Aligned_cols=268  Identities=15%  Similarity=0.132  Sum_probs=180.3

Q ss_pred             CCCcceEEEEEEcCCCC----ceEEEEEeeccCch-hhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPFPDDR----DDVMLKLHELITPL-QLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~----~~vAiK~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      +.|.||.||+|+.++++    +.+|+|.++-..+. ......-||+.+++.++|||++.|...|..      .+..++++
T Consensus        33 g~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~------~d~~v~l~  106 (438)
T KOG0666|consen   33 GRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLS------HDKKVWLL  106 (438)
T ss_pred             cccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhc------cCceEEEE
Confidence            57999999999765543    37899999753222 223556899999999999999999997642      24478899


Q ss_pred             eccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCC----CceEEeccccc
Q 019481           79 KWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDET----FKCNLSDFSTA  154 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~----~~~kl~DFGla  154 (340)
                      +||.+. +|.++|+-........++...++.++.||+.|+.|||+  +-|+||||||.|||+..+    |.+||+|||+|
T Consensus       107 fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~--NWvlHRDLKPaNIlvmgdgperG~VKIaDlGla  183 (438)
T KOG0666|consen  107 FDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS--NWVLHRDLKPANILVMGDGPERGRVKIADLGLA  183 (438)
T ss_pred             ehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh--hheeeccCCcceEEEeccCCccCeeEeecccHH
Confidence            999986 99999987665444569999999999999999999999  999999999999999877    99999999999


Q ss_pred             eeecccCC----cceeeccceeeccC------------ccccchhhhhHhHhCCcccccccccccc-CCCCCCcccccCC
Q 019481          155 KVSAVENA----DLTALDTSSVSAQS------------GKTGMEMKMAQLESGGWRAHDEAEKAFQ-WPYKSSHLKNTRP  217 (340)
Q Consensus       155 ~~~~~~~~----~~~~~gt~~~~~p~------------~~~~~~~~~~~~~s~g~~~~~~~~~~~~-~~~~~~~~~~~~~  217 (340)
                      |.+...-.    ....+-|..|.|||            |.|+-|++.+|+++...-+...+.++.. -||....+.-+..
T Consensus       184 R~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~  263 (438)
T KOG0666|consen  184 RLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFE  263 (438)
T ss_pred             HHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHH
Confidence            97755321    12234466666664            7777888888877643333332222211 1333322222222


Q ss_pred             CccC-CchhHHHHHHHHHHHHhhhhcc-----------c----cccCcCCccccccccccCCCCchHHHHhhcCcceee
Q 019481          218 NLKT-ENETWNNFLYLLLIATLLSTIT-----------F----LSALKITGCKSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       218 ~l~~-~~~~~~~~~~~~~~~~~~~~~~-----------~----~~~~~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                      -+.+ ....|+.+...-....++....           +    +....-+-++....|++||.+|.||++.++|+||..
T Consensus       264 vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~  342 (438)
T KOG0666|consen  264 VLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTE  342 (438)
T ss_pred             HcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccccccc
Confidence            2222 2223443322211111111111           0    000111223344679999999999999999999943

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=1.5e-33  Score=245.06  Aligned_cols=238  Identities=16%  Similarity=0.090  Sum_probs=169.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|++|.||+|++..+++.||+|.++.. ......+.+.+|++++++++||||+++++++.       +....++++||+
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~~   81 (256)
T cd08529           9 GKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFL-------DKGKLNIVMEYA   81 (256)
T ss_pred             cCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeec-------cCCEEEEEEEeC
Confidence            3689999999999999999999998752 23455677899999999999999999999665       334778999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      ++++|.+++.....   ..+++..+..++.|++.||.|||+  ++++||||||+||+++.++.+||+|||+++.......
T Consensus        82 ~~~~L~~~l~~~~~---~~~~~~~~~~i~~~l~~al~~lH~--~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~  156 (256)
T cd08529          82 ENGDLHKLLKMQRG---RPLPEDQVWRFFIQILLGLAHLHS--KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN  156 (256)
T ss_pred             CCCcHHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCcceEEEeCCCCEEEcccccceeccCccc
Confidence            99999999987532   348999999999999999999999  8899999999999999999999999999987655322


Q ss_pred             -cceeeccceeeccCccccchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          163 -DLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       163 -~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                       .....|++.|++|+...+... ...|+|+                     .|++..++.+|..||.........    .
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s---------------------lG~il~~l~~g~~p~~~~~~~~~~----~  211 (256)
T cd08529         157 FANTIVGTPYYLSPELCEDKPYNEKSDVWA---------------------LGVVLYECCTGKHPFDANNQGALI----L  211 (256)
T ss_pred             hhhccccCccccCHHHhcCCCCCCccchHH---------------------HHHHHHHHHhCCCCCCCCCHHHHH----H
Confidence             233456777777753322111 1123333                     333333333333333221111000    0


Q ss_pred             hccccccCcCCc-------cccccccccCCCCchHHHHhhcCcce
Q 019481          241 TITFLSALKITG-------CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~~~~~p~-------~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .+.....+.++.       ++...|++.||++||++.+++.|||+
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         212 KIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             HHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence            011111122221       23447899999999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-34  Score=264.53  Aligned_cols=193  Identities=18%  Similarity=0.092  Sum_probs=155.4

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .||||.||+++++.+|+.||+|..+........+.--+|+++|++++|||||++++.=++..... -...-.++||||+|
T Consensus        23 ~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~-~~~~~vlvmEyC~g  101 (732)
T KOG4250|consen   23 KGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGL-VTRLPVLVMEYCSG  101 (732)
T ss_pred             CCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCc-ccccceEEEeecCC
Confidence            69999999999999999999999987655666777889999999999999999999655443211 12245689999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC--CCc--eEEeccccceeeccc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE--TFK--CNLSDFSTAKVSAVE  160 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~--~~~--~kl~DFGla~~~~~~  160 (340)
                      |||+..+.+-.+  ..+|+|.+.+.+..++..||.|||+  ++|+||||||.||++-.  +|+  -||+|||.||.++++
T Consensus       102 GsL~~~L~~PEN--~~GLpE~e~l~lL~d~~~al~~LrE--n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~  177 (732)
T KOG4250|consen  102 GSLRKVLNSPEN--AYGLPESEFLDLLSDLVSALRHLRE--NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDN  177 (732)
T ss_pred             CcHHHHhcCccc--ccCCCHHHHHHHHHHHHHHHHHHHH--cCceeccCCCCcEEEeecCCCceEEeeecccccccCCCC
Confidence            999999987544  2569999999999999999999999  77999999999999943  344  799999999999999


Q ss_pred             CCcceeeccceeeccCccc--cchhhhhHhHhCCcccccccccc
Q 019481          161 NADLTALDTSSVSAQSGKT--GMEMKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~--~~~~~~~~~~s~g~~~~~~~~~~  202 (340)
                      ....+..||+.|.+|+-|-  ++--...|+||.|.++|..+++.
T Consensus       178 s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~  221 (732)
T KOG4250|consen  178 SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGE  221 (732)
T ss_pred             CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccC
Confidence            9889999999999995433  11111235566566555554444

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=1.7e-33  Score=247.88  Aligned_cols=235  Identities=20%  Similarity=0.147  Sum_probs=168.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      +.|+||.||+|.+..+++.||+|.++........+.+.+|++++++++||||+++++.|.       +....++++||++
T Consensus        13 ~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~~~   85 (277)
T cd06642          13 GKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYL-------KGTKLWIIMEYLG   85 (277)
T ss_pred             cCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccc-------cCCceEEEEEccC
Confidence            468999999999999999999999875444455677899999999999999999999765       3346779999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-C
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-A  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~  162 (340)
                      +++|.+++... .     +++..+..++.|+++||.|||+  ++++|+||+|+||+++.++.+||+|||+++.+.... .
T Consensus        86 ~~~L~~~~~~~-~-----~~~~~~~~~~~~i~~~l~~lH~--~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~  157 (277)
T cd06642          86 GGSALDLLKPG-P-----LEETYIATILREILKGLDYLHS--ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK  157 (277)
T ss_pred             CCcHHHHhhcC-C-----CCHHHHHHHHHHHHHHHHHHhc--CCeeccCCChheEEEeCCCCEEEccccccccccCcchh
Confidence            99999998653 2     8999999999999999999999  889999999999999999999999999998765432 2


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      .....|+..|++|+.+.+.+.. ..|+|+.|...+.+.++.  .|+...........                       
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~--~p~~~~~~~~~~~~-----------------------  212 (277)
T cd06642         158 RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE--PPNSDLHPMRVLFL-----------------------  212 (277)
T ss_pred             hhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCC--CCCcccchhhHHhh-----------------------
Confidence            2234567778887543332211 234444444443333222  22111100000000                       


Q ss_pred             ccccccCcCC-------ccccccccccCCCCchHHHHhhcCcce
Q 019481          242 ITFLSALKIT-------GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       242 ~~~~~~~~~p-------~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      +.....+.++       .++...|++.||++||+++++++|||+
T Consensus       213 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  256 (277)
T cd06642         213 IPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFI  256 (277)
T ss_pred             hhcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHH
Confidence            0000011111       123446899999999999999999998

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=3.4e-33  Score=243.07  Aligned_cols=238  Identities=16%  Similarity=0.192  Sum_probs=169.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|++|.||++++..+++.||+|.+.... .....+.+.+|++++++++||||+++++.|..      +....++++||++
T Consensus        10 ~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~~~~~lv~e~~~   83 (257)
T cd08223          10 KGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEG------EDGLLYIVMGFCE   83 (257)
T ss_pred             CCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecC------CCCEEEEEecccC
Confidence            5889999999999999999999997532 23445678899999999999999999986532      2336789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-CC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-NA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~~  162 (340)
                      +++|.+.+.....   ..+++.++..++.|++.||+|||+  ++++||||||+||+++.++.++|+|||++...... ..
T Consensus        84 ~~~l~~~l~~~~~---~~l~~~~~~~~~~~l~~~l~~lH~--~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~  158 (257)
T cd08223          84 GGDLYHKLKEQKG---KLLPENQVVEWFVQIAMALQYLHE--KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDM  158 (257)
T ss_pred             CCcHHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCchhEEEecCCcEEEecccceEEecccCCc
Confidence            9999999986433   348999999999999999999999  88999999999999999999999999999876542 22


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      .....|++.|++|+...+...- ..|+|+.|...+.+.+..  .||.....              ......         
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~--~~~~~~~~--------------~~~~~~---------  213 (257)
T cd08223         159 ASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLK--HAFNAKDM--------------NSLVYR---------  213 (257)
T ss_pred             cccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCC--CCCCCCCH--------------HHHHHH---------
Confidence            3345678888888644332211 235555444444433322  22211100              000000         


Q ss_pred             ccccccCcCCc-------cccccccccCCCCchHHHHhhcCcce
Q 019481          242 ITFLSALKITG-------CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       242 ~~~~~~~~~p~-------~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      +.....+.++.       ++-..|++.||.+||+++++++|||+
T Consensus       214 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         214 IIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             HHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            00000111111       22346799999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=8.2e-34  Score=247.22  Aligned_cols=159  Identities=21%  Similarity=0.183  Sum_probs=135.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      +.|+||.||+|.+..+++.||+|++.+..  .....+.+.+|++++++++||||+++++.|.       +....++++||
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~   81 (258)
T cd05578           9 GKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQ-------DEENMYLVVDL   81 (258)
T ss_pred             ccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhc-------CCCeEEEEEeC
Confidence            46899999999999999999999997522  2244677899999999999999999999664       44578899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++++|.+++.....     +++..+..++.|+++||.|||+  ++++|+||||+||++++++.++|+|||++.......
T Consensus        82 ~~~~~L~~~l~~~~~-----l~~~~~~~~~~~i~~~l~~lh~--~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~  154 (258)
T cd05578          82 LLGGDLRYHLSQKVK-----FSEEQVKFWICEIVLALEYLHS--KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT  154 (258)
T ss_pred             CCCCCHHHHHHhcCC-----cCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence            999999999987644     8999999999999999999999  779999999999999999999999999998765543


Q ss_pred             CcceeeccceeeccC
Q 019481          162 ADLTALDTSSVSAQS  176 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~  176 (340)
                      ......|+..|++|+
T Consensus       155 ~~~~~~~~~~y~~PE  169 (258)
T cd05578         155 LTTSTSGTPGYMAPE  169 (258)
T ss_pred             cccccCCChhhcCHH
Confidence            334455666777774

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=5e-33  Score=245.53  Aligned_cols=242  Identities=16%  Similarity=0.114  Sum_probs=169.4

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|++..+++.+|+|+....  ......+.+|+.+++++ +||||++++++|..... .....+.+++|||+
T Consensus        25 g~g~~~~v~~~~~~~~~~~~a~K~~~~~--~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~-~~~~~~~~iv~e~~  101 (282)
T cd06636          25 GNGTYGQVYKGRHVKTGQLAAIKVMDVT--EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSP-PGHDDQLWLVMEFC  101 (282)
T ss_pred             ccCCCeEEEEEEEcCCCcEEEEEEEecC--hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccc-cCCCCEEEEEEEeC
Confidence            4688999999999999999999998643  23445688899999998 69999999998753321 12345788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-C
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-N  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~  161 (340)
                      ++|+|.+++.....   ..+++..+..++.||++||+|||+  ++|+||||||+||+++.++.+||+|||++...... .
T Consensus       102 ~~~~L~~~~~~~~~---~~~~~~~~~~~~~qi~~al~~LH~--~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~  176 (282)
T cd06636         102 GAGSVTDLVKNTKG---NALKEDWIAYICREILRGLAHLHA--HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG  176 (282)
T ss_pred             CCCcHHHHHHHccC---CCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEEEeeCcchhhhhcccc
Confidence            99999999986543   348899999999999999999999  78999999999999999999999999998765432 2


Q ss_pred             CcceeeccceeeccCccccc-----hh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHH
Q 019481          162 ADLTALDTSSVSAQSGKTGM-----EM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLI  235 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~-----~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (340)
                      ......|+..|++|+....-     .+ ...|+|+.|...                     .++.++..||.........
T Consensus       177 ~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l---------------------~el~~g~~p~~~~~~~~~~  235 (282)
T cd06636         177 RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITA---------------------IEMAEGAPPLCDMHPMRAL  235 (282)
T ss_pred             CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHH---------------------HHHHhCCCCccccCHHhhh
Confidence            23345677778888543210     00 012444433333                     3333333333221111000


Q ss_pred             HHhhhhccccccCc-----CC---ccccccccccCCCCchHHHHhhcCcce
Q 019481          236 ATLLSTITFLSALK-----IT---GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       236 ~~~~~~~~~~~~~~-----~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ...    .....+.     .+   .++-..||+.||.+||++++|++|||+
T Consensus       236 ~~~----~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         236 FLI----PRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             hhH----hhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence            000    0000011     11   123447899999999999999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=2.6e-33  Score=251.42  Aligned_cols=188  Identities=18%  Similarity=0.147  Sum_probs=140.8

Q ss_pred             CCCcceEEEEEEcCC--CCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPD--DRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~--~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|++..  +++.||+|.+....   ....+.+|++++++++||||++++++|..     .+....++++||
T Consensus        10 G~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~~~~lv~e~   81 (317)
T cd07867          10 GRGTYGHVYKAKRKDGKDEKEYALKQIEGTG---ISMSACREIALLRELKHPNVIALQKVFLS-----HSDRKVWLLFDY   81 (317)
T ss_pred             ccCCCeeEEEEEecCCCccceEEEEEecCCC---CcHHHHHHHHHHHhCCCCCeeeEEEEEec-----cCCCeEEEEEee
Confidence            468999999999654  56789999986422   23457789999999999999999997642     244577899999


Q ss_pred             ccCCCHHHHhcccCCC----ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEe----cCCCceEEecccc
Q 019481           82 MQKKGLENVHIGEHPA----SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILL----DETFKCNLSDFST  153 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~----~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl----~~~~~~kl~DFGl  153 (340)
                      +. ++|.+++......    ....+++..+..++.||+.||+|||+  ++|+||||||+|||+    +.++.+||+|||+
T Consensus        82 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~--~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~  158 (317)
T cd07867          82 AE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA--NWVLHRDLKPANILVMGEGPERGRVKIADMGF  158 (317)
T ss_pred             eC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh--CCEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence            86 5888887532110    11348999999999999999999999  889999999999999    5678999999999


Q ss_pred             ceeecccCC----cceeeccceeeccCccccchh--hhhHhHhCCcccccccccc
Q 019481          154 AKVSAVENA----DLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       154 a~~~~~~~~----~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~~  202 (340)
                      |+.......    .....||+.|+||+.+.+...  ...|+|+.|...+.+.++.
T Consensus       159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~  213 (317)
T cd07867         159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE  213 (317)
T ss_pred             eeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCC
Confidence            987654321    234567888999975543221  2346777666666655443

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=8.5e-33  Score=242.22  Aligned_cols=238  Identities=15%  Similarity=0.079  Sum_probs=165.6

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|++..+++.||+|.+.... ....+.+.+|++++++++|+||+++++++.       +....++++||++
T Consensus        17 g~g~~g~v~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-------~~~~~~lv~e~~~   88 (268)
T cd06624          17 GKGTYGIVYAARDLSTQVRIAIKEIPERD-SRYVQPLHEEIALHSYLKHRNIVQYLGSDS-------ENGFFKIFMEQVP   88 (268)
T ss_pred             ecCCceEEEEeEecCCCcEEEEEEecCCC-HHHHHHHHHHHHHHHhcCCCCeeeeeeeec-------cCCEEEEEEecCC
Confidence            46899999999999999999999987433 344567899999999999999999999664       3347789999999


Q ss_pred             CCCHHHHhcccCCCccccC--CHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC-CCceEEeccccceeeccc
Q 019481           84 KKGLENVHIGEHPASVRQL--RRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE-TFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l--~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~-~~~~kl~DFGla~~~~~~  160 (340)
                      +++|.+++.....    .+  ++..+..++.||+.||+|||+  ++|+||||||+||+++. ++.+||+|||++......
T Consensus        89 ~~~L~~~l~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~--~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~  162 (268)
T cd06624          89 GGSLSALLRSKWG----PLKDNEQTIIFYTKQILEGLKYLHD--NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI  162 (268)
T ss_pred             CCCHHHHHHHhcc----cCCCcHHHHHHHHHHHHHHHHHHHH--CCEeecCCCHHHEEEcCCCCeEEEecchhheecccC
Confidence            9999999986532    25  888999999999999999999  88999999999999986 679999999999766432


Q ss_pred             CC-cceeeccceeeccCccccch--h-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHH
Q 019481          161 NA-DLTALDTSSVSAQSGKTGME--M-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIA  236 (340)
Q Consensus       161 ~~-~~~~~gt~~~~~p~~~~~~~--~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (340)
                      .. .....|+..|++|+.+....  . ...|+|+.|...+....                     +..+|........  
T Consensus       163 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~---------------------g~~p~~~~~~~~~--  219 (268)
T cd06624         163 NPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMAT---------------------GKPPFIELGEPQA--  219 (268)
T ss_pred             CCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHh---------------------CCCCCccccChhh--
Confidence            22 22335677777775432110  0 12344444444333322                     2222211100000  


Q ss_pred             HhhhhccccccCcCCc-------cccccccccCCCCchHHHHhhcCcce
Q 019481          237 TLLSTITFLSALKITG-------CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       237 ~~~~~~~~~~~~~~p~-------~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ...........+.+|.       .+...|++.||.+|||+++++.|||+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         220 AMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             hHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence            0000000111122222       23447799999999999999999996

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=1.4e-33  Score=246.92  Aligned_cols=159  Identities=20%  Similarity=0.157  Sum_probs=133.9

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|++..+++.||+|++.... ......+.+|+.++++++||||+++++++.       +....++++||++
T Consensus        18 g~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~-------~~~~~~iv~e~~~   89 (267)
T cd06646          18 GSGTYGDVYKARNLHTGELAAVKIIKLEP-GDDFSLIQQEIFMVKECKHCNIVAYFGSYL-------SREKLWICMEYCG   89 (267)
T ss_pred             ecCCCeEEEEEEECCCCeEEEEEEEecCc-cchHHHHHHHHHHHHhcCCCCeeeeeEEEE-------eCCEEEEEEeCCC
Confidence            36899999999999999999999997432 233456789999999999999999999764       3346789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-C
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-A  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~  162 (340)
                      +++|.+++.....     +++..+..++.|++.||+|||+  .+|+||||||+||+++.++.+||+|||+++...... .
T Consensus        90 ~~~L~~~~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~  162 (267)
T cd06646          90 GGSLQDIYHVTGP-----LSELQIAYVCRETLQGLAYLHS--KGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAK  162 (267)
T ss_pred             CCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEECCCCCEEECcCccceeecccccc
Confidence            9999999987655     8999999999999999999999  889999999999999999999999999998764332 2


Q ss_pred             cceeeccceeeccCc
Q 019481          163 DLTALDTSSVSAQSG  177 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~  177 (340)
                      .....|+..|++|+.
T Consensus       163 ~~~~~~~~~y~~PE~  177 (267)
T cd06646         163 RKSFIGTPYWMAPEV  177 (267)
T ss_pred             cCccccCccccCHhH
Confidence            234567777888754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=7.6e-34  Score=254.89  Aligned_cols=221  Identities=17%  Similarity=0.203  Sum_probs=167.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      +|+-|.||+|+..  ++.||||.++.        .-..+|.-|++|+|||||.+.|+...      ..-|| ++||||+.
T Consensus       134 SGaQGAVF~Grl~--netVAVKKV~e--------lkETdIKHLRkLkH~NII~FkGVCtq------sPcyC-IiMEfCa~  196 (904)
T KOG4721|consen  134 SGAQGAVFLGRLH--NETVAVKKVRE--------LKETDIKHLRKLKHPNIITFKGVCTQ------SPCYC-IIMEFCAQ  196 (904)
T ss_pred             cCcccceeeeecc--CceehhHHHhh--------hhhhhHHHHHhccCcceeeEeeeecC------CceeE-Eeeecccc
Confidence            6889999999975  56799999852        12457888999999999999995532      33355 79999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCcc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADL  164 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~  164 (340)
                      |.|...|+....     +.......|..+|+.|++|||.  +.|||||||.-||||..+..+||+|||.++...+.....
T Consensus       197 GqL~~VLka~~~-----itp~llv~Wsk~IA~GM~YLH~--hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkM  269 (904)
T KOG4721|consen  197 GQLYEVLKAGRP-----ITPSLLVDWSKGIAGGMNYLHL--HKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKM  269 (904)
T ss_pred             ccHHHHHhccCc-----cCHHHHHHHHHHhhhhhHHHHH--hhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhh
Confidence            999999998876     8999999999999999999999  779999999999999999999999999999988888888


Q ss_pred             eeeccceeeccC-----------ccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHH
Q 019481          165 TALDTSSVSAQS-----------GKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLL  233 (340)
Q Consensus       165 ~~~gt~~~~~p~-----------~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (340)
                      +++||..||||+           |+|++|+++.+++++..+..+......+|--....+...                  
T Consensus       270 SFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~Lp------------------  331 (904)
T KOG4721|consen  270 SFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLP------------------  331 (904)
T ss_pred             hhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCccccc------------------
Confidence            999999999994           444555555555543333333333333333111111100                  


Q ss_pred             HHHHhhhhccccccCcCCccc---cccccccCCCCchHHHHhhcCccee
Q 019481          234 LIATLLSTITFLSALKITGCK---SEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       234 ~~~~~~~~~~~~~~~~~p~~~---~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                                  .+...|..|   .+.||+-.|..||+..+++.|--|+
T Consensus       332 ------------vPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa  368 (904)
T KOG4721|consen  332 ------------VPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA  368 (904)
T ss_pred             ------------CcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence                        011112221   3478889999999999999997774

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.2e-33  Score=247.46  Aligned_cols=235  Identities=18%  Similarity=0.135  Sum_probs=166.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc--------hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP--------LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCW   76 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~--------~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~   76 (340)
                      .|+||.||+|.+..+++.+|+|.+.....        .+..+.+.+|++++++++||||+++++++.       +..+.+
T Consensus        10 ~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~   82 (267)
T cd06628          10 SGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSL-------DADHLN   82 (267)
T ss_pred             cCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE-------eCCccE
Confidence            58999999999998999999998864211        122356889999999999999999999665       334677


Q ss_pred             eeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481           77 KNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus        77 ~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      +++||+++++|.+++.....     +++..+..++.|++.||+|||+  ++++||||||+||+++.++.+||+|||+++.
T Consensus        83 lv~e~~~~~~L~~~l~~~~~-----l~~~~~~~~~~~l~~~l~~lH~--~~ivH~di~p~nil~~~~~~~~l~dfg~~~~  155 (267)
T cd06628          83 IFLEYVPGGSVAALLNNYGA-----FEETLVRNFVRQILKGLNYLHN--RGIIHRDIKGANILVDNKGGIKISDFGISKK  155 (267)
T ss_pred             EEEEecCCCCHHHHHHhccC-----ccHHHHHHHHHHHHHHHHHHHh--cCcccccCCHHHEEEcCCCCEEecccCCCcc
Confidence            99999999999999987665     8999999999999999999999  7799999999999999999999999999987


Q ss_pred             ecccC-------CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHH
Q 019481          157 SAVEN-------ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNN  228 (340)
Q Consensus       157 ~~~~~-------~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (340)
                      .....       ......|+..|++|+.+.+.... ..|+|+.|..                     ..++.+|..||..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~i---------------------l~~l~~g~~p~~~  214 (267)
T cd06628         156 LEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCL---------------------VVEMLTGKHPFPD  214 (267)
T ss_pred             cccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHH---------------------HHHHhhCCCCCCC
Confidence            65321       11123466667777533221111 1244443333                     3333333333322


Q ss_pred             HHHHHHHHHhhhhccccccCcCCc-------cccccccccCCCCchHHHHhhcCcce
Q 019481          229 FLYLLLIATLLSTITFLSALKITG-------CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~p~-------~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ........    .+.....+.+|.       .+-+.|++.||.+||+++++++|||+
T Consensus       215 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         215 CTQLQAIF----KIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             ccHHHHHH----HHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence            11110000    000011122222       23447899999999999999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.1e-33  Score=246.85  Aligned_cols=237  Identities=18%  Similarity=0.109  Sum_probs=172.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|++..+++.||+|.+...........+.+|+++++.++||||++++++|.       +..+.++++||++
T Consensus        10 g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~~v~e~~~   82 (274)
T cd06609          10 GKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFL-------KGSKLWIIMEYCG   82 (274)
T ss_pred             cCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEE-------ECCeEEEEEEeeC
Confidence            368899999999999999999999976443445567889999999999999999999664       3347889999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-CC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-NA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~~  162 (340)
                      +++|.+++... .     +++..+..++.|++.||.|||+  ++++||||+|+||+++.++.++|+|||+++.+... ..
T Consensus        83 ~~~L~~~~~~~-~-----~~~~~~~~~~~ql~~~l~~lh~--~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~  154 (274)
T cd06609          83 GGSCLDLLKPG-K-----LDETYIAFILREVLLGLEYLHE--EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSK  154 (274)
T ss_pred             CCcHHHHHhhc-C-----CCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEEECCCCCEEEcccccceeecccccc
Confidence            99999999865 3     8999999999999999999999  78999999999999999999999999999887654 23


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      .....|+..|++|+...+.... ..|+|+.|...+.+.++.  .||....                   .....    ..
T Consensus       155 ~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~--~p~~~~~-------------------~~~~~----~~  209 (274)
T cd06609         155 RNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGE--PPLSDLH-------------------PMRVL----FL  209 (274)
T ss_pred             cccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCC--CCcccCc-------------------hHHHH----HH
Confidence            3345677778888644332211 234555444444433322  2221111                   00000    00


Q ss_pred             ccccccCcCC--------ccccccccccCCCCchHHHHhhcCcceee
Q 019481          242 ITFLSALKIT--------GCKSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       242 ~~~~~~~~~p--------~~~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                      +.....+.++        .++-..|+..||++|||++++++|||+.+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~  256 (274)
T cd06609         210 IPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKK  256 (274)
T ss_pred             hhhcCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcC
Confidence            0001111111        12234679999999999999999999943

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-33  Score=252.74  Aligned_cols=143  Identities=19%  Similarity=0.146  Sum_probs=124.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCch--hhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPL--QLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|.+..+++.||+|.+......  ...+.+.+|++++++++||||+++++.+.       +....++++||
T Consensus        10 g~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-------~~~~~~lv~e~   82 (316)
T cd05574          10 GKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQ-------TETYLCLVMDY   82 (316)
T ss_pred             cCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeee-------cCCEEEEEEEe
Confidence            4688999999999999999999999763322  34567889999999999999999999664       34477899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      +++++|.+++.....   ..+++..+..++.|+++||+|||+  .+++||||||+||+++.++.++|+|||++....
T Consensus        83 ~~~~~L~~~~~~~~~---~~l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~  154 (316)
T cd05574          83 CPGGELFRLLQRQPG---KCLSEEVARFYAAEVLLALEYLHL--LGIVYRDLKPENILLHESGHIMLSDFDLSKQSD  154 (316)
T ss_pred             cCCCCHHHHHHhCCC---CccCHHHHHHHHHHHHHHHHHHHH--CCeeccCCChHHeEEcCCCCEEEeecchhhccc
Confidence            999999999986533   358999999999999999999999  789999999999999999999999999987543

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=3.2e-33  Score=243.20  Aligned_cols=236  Identities=19%  Similarity=0.145  Sum_probs=170.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC----chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT----PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      ..|+||.||+|++..+++.||+|.+....    ..+..+.+.+|++++++++||||+++++++.       +...+++++
T Consensus         9 g~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-------~~~~~~lv~   81 (258)
T cd06632           9 GSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTER-------EEDNLYIFL   81 (258)
T ss_pred             eecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEe-------cCCeEEEEE
Confidence            36899999999999899999999987522    1234567899999999999999999999654       344788999


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      ||+++++|.+++.+...     +++..+..++.||++||+|||+  .+|+|+||||+||+++.++.+||+|||++.....
T Consensus        82 e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~  154 (258)
T cd06632          82 ELVPGGSLAKLLKKYGS-----FPEPVIRLYTRQILLGLEYLHD--RNTVHRDIKGANILVDTNGVVKLADFGMAKQVVE  154 (258)
T ss_pred             EecCCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence            99999999999987655     8999999999999999999999  7799999999999999999999999999987655


Q ss_pred             cCCcceeeccceeeccCccccch--hhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHH
Q 019481          160 ENADLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIAT  237 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (340)
                      ........|+..|++|+.+....  -...|+|+.|...                     .++.++..+|.........  
T Consensus       155 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l---------------------~~l~~g~~pf~~~~~~~~~--  211 (258)
T cd06632         155 FSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTV---------------------LEMATGKPPWSQLEGVAAV--  211 (258)
T ss_pred             cccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHH---------------------HHHHhCCCCcccCcHHHHH--
Confidence            44344556777788875432211  1113444433333                     3333333333221111000  


Q ss_pred             hhhhccc-cccCcCCcc-------ccccccccCCCCchHHHHhhcCcce
Q 019481          238 LLSTITF-LSALKITGC-------KSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       238 ~~~~~~~-~~~~~~p~~-------~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                        ..+.. ...+.+|..       +...|++.||.+||++++++.|||+
T Consensus       212 --~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         212 --FKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             --HHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence              00011 111222222       2347899999999999999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=1.4e-33  Score=253.18  Aligned_cols=159  Identities=14%  Similarity=0.156  Sum_probs=129.5

Q ss_pred             CCCcceEEEEEEcCCCCce----EEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            4 SAPSFSVLIHVPFPDDRDD----VMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~----vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      ..|+||.||+|++..+++.    ||+|.++........+.+.+|+.+++.++||||+++++++...        ..++++
T Consensus        16 g~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~--------~~~~v~   87 (316)
T cd05108          16 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS--------TVQLIT   87 (316)
T ss_pred             ecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC--------Cceeee
Confidence            3688999999997666554    8999987544445567788999999999999999999966422        345889


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      ||+++|+|.+++.....    .+++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++....
T Consensus        88 e~~~~g~l~~~l~~~~~----~~~~~~~~~~~~qi~~~L~~LH~--~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~  161 (316)
T cd05108          88 QLMPFGCLLDYVREHKD----NIGSQYLLNWCVQIAKGMNYLEE--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA  161 (316)
T ss_pred             ecCCCCCHHHHHHhccc----cCCHHHHHHHHHHHHHHHHHHHh--cCeeccccchhheEecCCCcEEEccccccccccC
Confidence            99999999999987653    38999999999999999999999  8899999999999999999999999999987754


Q ss_pred             cCCccee---eccceeeccC
Q 019481          160 ENADLTA---LDTSSVSAQS  176 (340)
Q Consensus       160 ~~~~~~~---~gt~~~~~p~  176 (340)
                      .......   .++..|++|+
T Consensus       162 ~~~~~~~~~~~~~~~y~apE  181 (316)
T cd05108         162 DEKEYHAEGGKVPIKWMALE  181 (316)
T ss_pred             CCcceeccCCccceeecChH
Confidence            4332222   2345577774

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=1e-33  Score=249.37  Aligned_cols=241  Identities=15%  Similarity=0.060  Sum_probs=168.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|.+..+++.||+|.+....  .....+.+.+|++++++++||||++++++|.       +.+..++++||
T Consensus         2 g~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-------~~~~~~lv~e~   74 (277)
T cd05577           2 GKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFE-------TKDDLCLVMTL   74 (277)
T ss_pred             CCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEe-------cCCeEEEEEec
Confidence            36889999999999999999999987522  1223455678999999999999999999664       33467899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++++|.+++.....   ..+++..+..++.|++.||.|||+  .+++||||||+||+++.++.+||+|||++.......
T Consensus        75 ~~~~~L~~~l~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~--~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~  149 (277)
T cd05577          75 MNGGDLKYHIYNVGE---PGFPEARAIFYAAQIICGLEHLHQ--RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK  149 (277)
T ss_pred             CCCCcHHHHHHHcCc---CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC
Confidence            999999999987653   248999999999999999999999  779999999999999999999999999997665433


Q ss_pred             CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      ......++..|++|+...+-... ..|+|+.|...+.+..+..+|.  .....             ......       .
T Consensus       150 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~--~~~~~-------------~~~~~~-------~  207 (277)
T cd05577         150 KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFR--QRKEK-------------VEKEEL-------K  207 (277)
T ss_pred             ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCC--CCccc-------------ccHHHH-------H
Confidence            33344566677777543222111 2345554444444433221121  11000             000000       0


Q ss_pred             hccccccCcCC-------ccccccccccCCCCch-----HHHHhhcCcce
Q 019481          241 TITFLSALKIT-------GCKSEEGYKNNSSLNP-----ICQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~~~~~p-------~~~~~~~l~~dP~~R~-----t~~~ll~hp~~  278 (340)
                      ..........|       .++-..||+.||++||     ++++++.|||+
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~  257 (277)
T cd05577         208 RRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLF  257 (277)
T ss_pred             hccccccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhh
Confidence            00011111111       1234477999999999     89999999999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=2.1e-33  Score=245.88  Aligned_cols=240  Identities=17%  Similarity=0.174  Sum_probs=167.4

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc-----hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP-----LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-----~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      ..|+||.||+|.+..+++.||+|.+.....     ....+.+.+|++++++++||||+++++++.       +....+++
T Consensus         9 g~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-------~~~~~~~v   81 (268)
T cd06630           9 GTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATC-------EDSHFNLF   81 (268)
T ss_pred             cCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceec-------cCCeEEEE
Confidence            468999999999999999999999874221     123567899999999999999999999664       34467799


Q ss_pred             eccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC-ceEEeccccceee
Q 019481           79 KWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF-KCNLSDFSTAKVS  157 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~-~~kl~DFGla~~~  157 (340)
                      +||+++++|.+++.+...     +++..+..++.|++.||+|||+  ++++||||||+||+++.++ .+||+|||++...
T Consensus        82 ~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~ql~~al~~LH~--~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~  154 (268)
T cd06630          82 VEWMAGGSVSHLLSKYGA-----FKEAVIINYTEQLLRGLSYLHE--NQIIHRDVKGANLLIDSTGQRLRIADFGAAARL  154 (268)
T ss_pred             EeccCCCcHHHHHHHhCC-----CCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence            999999999999987655     8999999999999999999999  7899999999999998876 5999999999776


Q ss_pred             cccCC-----cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHH
Q 019481          158 AVENA-----DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLY  231 (340)
Q Consensus       158 ~~~~~-----~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (340)
                      .....     .....|+..|++|+...+.... ..|+|+.|...+.+..+.  .|+......              ....
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~--~p~~~~~~~--------------~~~~  218 (268)
T cd06630         155 AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAK--PPWNAEKHS--------------NHLA  218 (268)
T ss_pred             ccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCC--CCCCCCCCc--------------chHH
Confidence            54311     1223567778887643322111 124444444444433322  222111100              0000


Q ss_pred             HHHHHHhhhhccccccCcCCcc-------ccccccccCCCCchHHHHhhcCcce
Q 019481          232 LLLIATLLSTITFLSALKITGC-------KSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~p~~-------~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      . ... .   ......+..|..       +...|++.||++||++.++++|||+
T Consensus       219 ~-~~~-~---~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~  267 (268)
T cd06630         219 L-IFK-I---ASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVF  267 (268)
T ss_pred             H-HHH-H---hccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCccc
Confidence            0 000 0   000111222222       2346799999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.2e-33  Score=260.72  Aligned_cols=175  Identities=18%  Similarity=0.123  Sum_probs=135.0

Q ss_pred             CCCcceEEEEEEcC--CCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFP--DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~--~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|...  .+++.||+|.+...      +...+|++++++++||||++++++|.       +....+++||+
T Consensus       101 g~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~------~~~~~E~~il~~l~h~~iv~~~~~~~-------~~~~~~lv~e~  167 (392)
T PHA03207        101 TPGSEGEVFVCTKHGDEQRKKVIVKAVTGG------KTPGREIDILKTISHRAIINLIHAYR-------WKSTVCMVMPK  167 (392)
T ss_pred             cCCCCeEEEEEEEcCCccceeEEEEecccc------ccHHHHHHHHHhcCCCCccceeeeEe-------eCCEEEEEehh
Confidence            36899999999753  45678999998532      23568999999999999999999765       33367789999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +. ++|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++......
T Consensus       168 ~~-~~l~~~l~~~~~-----l~~~~~~~i~~ql~~aL~~LH~--~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~  239 (392)
T PHA03207        168 YK-CDLFTYVDRSGP-----LPLEQAITIQRRLLEALAYLHG--RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP  239 (392)
T ss_pred             cC-CCHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence            95 699999865544     9999999999999999999999  889999999999999999999999999998665432


Q ss_pred             C---cceeeccceeeccCccccchhh-hhHhHhCCccccccc
Q 019481          162 A---DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEA  199 (340)
Q Consensus       162 ~---~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~  199 (340)
                      .   .....||..|++|+.+.+..+. ..|+|+.|+..+.+.
T Consensus       240 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~  281 (392)
T PHA03207        240 DTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMS  281 (392)
T ss_pred             ccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHH
Confidence            2   2245689999999643322111 235555555554443

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=1.8e-33  Score=246.40  Aligned_cols=181  Identities=13%  Similarity=0.114  Sum_probs=137.2

Q ss_pred             CCCcceEEEEEEcC---CCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFP---DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~---~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.||+|++.   ..+..||+|.++..........+.+|+.++++++||||+++++++.       +....+++||
T Consensus        14 g~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-------~~~~~~lv~e   86 (266)
T cd05064          14 GTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVIT-------RGNTMMIVTE   86 (266)
T ss_pred             cccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEe-------cCCCcEEEEE
Confidence            36889999999764   4567899999986544455667899999999999999999999664       3346789999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      |+++|+|.+++.....    .+++..++.++.||+.||+|||+  ++++||||||+||+++.++.+|++|||.+......
T Consensus        87 ~~~~~~L~~~l~~~~~----~l~~~~~~~~~~~i~~al~~lH~--~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~  160 (266)
T cd05064          87 YMSNGALDSFLRKHEG----QLVAGQLMGMLPGLASGMKYLSE--MGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSE  160 (266)
T ss_pred             eCCCCcHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHH--CCEeeccccHhhEEEcCCCcEEECCCccccccccc
Confidence            9999999999987543    38999999999999999999999  88999999999999999999999999987654322


Q ss_pred             CCc--ceeeccceeeccCccccchhh-hhHhHhCCccccc
Q 019481          161 NAD--LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHD  197 (340)
Q Consensus       161 ~~~--~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~  197 (340)
                      ...  ....++..|++|+.+.+..+. ..|+|+.|...++
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~e  200 (266)
T cd05064         161 AIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWE  200 (266)
T ss_pred             chhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHH
Confidence            111  112234557777533221111 2355554444443

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=2.8e-33  Score=244.87  Aligned_cols=237  Identities=16%  Similarity=0.138  Sum_probs=165.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC----chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT----PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|+||.||+|.+..+++.||+|.+....    .....+.+.+|++++++++||||+++++.|...     .....++++|
T Consensus        12 ~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~~~~v~e   86 (265)
T cd06652          12 QGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP-----MERTLSIFME   86 (265)
T ss_pred             cCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC-----CCceEEEEEE
Confidence            5889999999999999999999986421    123356788999999999999999999966432     2346778999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      |+++|+|.+++.+...     +++..+..++.|++.||+|||+  ++|+|+||||+||+++.++.+||+|||+++.....
T Consensus        87 ~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~l~~~l~~lH~--~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~  159 (265)
T cd06652          87 HMPGGSIKDQLKSYGA-----LTENVTRKYTRQILEGVSYLHS--NMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTI  159 (265)
T ss_pred             ecCCCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHEEecCCCCEEECcCccccccccc
Confidence            9999999999987655     8999999999999999999999  77999999999999999999999999999765421


Q ss_pred             ----CCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHH
Q 019481          161 ----NADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLI  235 (340)
Q Consensus       161 ----~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (340)
                          .......|+..|++|+.+.+.... ..|+|+.                     |++..++.+|..+|.........
T Consensus       160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~sl---------------------G~il~el~~g~~p~~~~~~~~~~  218 (265)
T cd06652         160 CLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSV---------------------GCTVVEMLTEKPPWAEFEAMAAI  218 (265)
T ss_pred             cccccccccCCCCccccChhhhcCCCCCcchhHHHH---------------------HHHHHHHhhCCCCCCccchHHHH
Confidence                112234577778888644322211 1234443                     33333344444443322111111


Q ss_pred             HHhhhhccccccCcCCccc-------cccccccCCCCchHHHHhhcCcce
Q 019481          236 ATLLSTITFLSALKITGCK-------SEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       236 ~~~~~~~~~~~~~~~p~~~-------~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ...   ......+..|...       ...|+ .+|.+||+++++++|||+
T Consensus       219 ~~~---~~~~~~~~~~~~~~~~~~~~i~~~l-~~p~~Rp~~~~il~~~~~  264 (265)
T cd06652         219 FKI---ATQPTNPVLPPHVSDHCRDFLKRIF-VEAKLRPSADELLRHTFV  264 (265)
T ss_pred             HHH---hcCCCCCCCchhhCHHHHHHHHHHh-cChhhCCCHHHHhcCccc
Confidence            101   0001112223222       22445 489999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.7e-33  Score=246.92  Aligned_cols=242  Identities=19%  Similarity=0.134  Sum_probs=169.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|++..+++.+|+|++.... ....+.+.+|++++++++||||++++++|.       +....+++|||++
T Consensus        14 ~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~~~   85 (280)
T cd06611          14 GDGAFGKVYKAQHKETGLFAAAKIIQIES-EEELEDFMVEIDILSECKHPNIVGLYEAYF-------YENKLWILIEFCD   85 (280)
T ss_pred             cCCCCceEEEEEEcCCCcEEEEEEEeeCC-HHHHHHHHHHHHHHHhCCCCceeEEEEEEe-------cCCeEEEEeeccC
Confidence            46889999999998899999999997432 344567889999999999999999999765       3447789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-CC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-NA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~~  162 (340)
                      +++|.+++.....    .+++..++.++.|++.||.|||+  ++|+||||||+||+++.++.+||+|||++...... ..
T Consensus        86 ~~~L~~~~~~~~~----~l~~~~~~~~~~ql~~~l~~lh~--~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~  159 (280)
T cd06611          86 GGALDSIMLELER----GLTEPQIRYVCRQMLEALNFLHS--HKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQK  159 (280)
T ss_pred             CCcHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCChhhEEECCCCCEEEccCccchhhcccccc
Confidence            9999999987543    39999999999999999999999  88999999999999999999999999998765432 22


Q ss_pred             cceeeccceeeccCcccc------chhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHH
Q 019481          163 DLTALDTSSVSAQSGKTG------MEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIA  236 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~------~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (340)
                      .....|+..|++|+....      +.-...|+|+.|...+                     ++.++..+|..........
T Consensus       160 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~---------------------~l~~g~~p~~~~~~~~~~~  218 (280)
T cd06611         160 RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLI---------------------ELAQMEPPHHELNPMRVLL  218 (280)
T ss_pred             cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHH---------------------HHHhCCCCcccCCHHHHHH
Confidence            234457777777743210      0001234444444433                     3333333332221110000


Q ss_pred             -Hh-hhhccccccCcCC---ccccccccccCCCCchHHHHhhcCcceee
Q 019481          237 -TL-LSTITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       237 -~~-~~~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                       .. ........+...+   .++-..|++.||.+||+++++++|||+..
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~  267 (280)
T cd06611         219 KILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSD  267 (280)
T ss_pred             HHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcc
Confidence             00 0000000001111   12234789999999999999999999943

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=3.7e-33  Score=242.22  Aligned_cols=143  Identities=22%  Similarity=0.270  Sum_probs=125.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|++..+++.||+|.+...........+.+|++++++++||||+++++++.       +....++++||++
T Consensus         4 g~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~~~   76 (252)
T cd05084           4 GRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCT-------QKQPIYIVMELVQ   76 (252)
T ss_pred             CcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-------CCCCeEEEEeecc
Confidence            467899999999999999999999875444555677899999999999999999999664       3346789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      +++|.+++.....    .+++..+..++.|+++||.|||+  ++|+||||||+||+++.++.+||+|||+++....
T Consensus        77 ~~~L~~~~~~~~~----~~~~~~~~~~~~qi~~~L~~lH~--~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~  146 (252)
T cd05084          77 GGDFLTFLRTEGP----RLKVKELIQMVENAAAGMEYLES--KHCIHRDLAARNCLVTEKNVLKISDFGMSREEED  146 (252)
T ss_pred             CCcHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHh--CCccccccchheEEEcCCCcEEECccccCccccc
Confidence            9999999976543    38999999999999999999999  8899999999999999999999999999976543

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=3.8e-33  Score=246.33  Aligned_cols=246  Identities=17%  Similarity=0.137  Sum_probs=172.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|.+..++..+|+|.+.... ....+.+.+|+++++.++||||++++++|..       ....++++||++
T Consensus        14 g~g~~g~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~-------~~~~~~v~e~~~   85 (282)
T cd06643          14 GDGAFGKVYKAQNKETGVLAAAKVIDTKS-EEELEDYMVEIDILASCDHPNIVKLLDAFYY-------ENNLWILIEFCA   85 (282)
T ss_pred             ccCCCeEEEEEEECCCCeEEEEEEeCCCC-HHHHHHHHHHHHHHHHCCCCCeeeEEEEEee-------CCEEEEEEEecC
Confidence            35889999999999999999999996433 3455678899999999999999999997653       347789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-CC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-NA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~~  162 (340)
                      +|+|.+++.....    .+++..+..++.|+++||.|||+  .+|+||||||+||+++.++.+||+|||+++..... ..
T Consensus        86 ~~~l~~~~~~~~~----~l~~~~~~~~~~qi~~~L~~LH~--~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~  159 (282)
T cd06643          86 GGAVDAVMLELER----PLTEPQIRVVCKQTLEALNYLHE--NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR  159 (282)
T ss_pred             CCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHH--CCeeecCCCcccEEEccCCCEEEccccccccccccccc
Confidence            9999998865432    38999999999999999999999  77999999999999999999999999998765432 22


Q ss_pred             cceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh-
Q 019481          163 DLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST-  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-  241 (340)
                      .....|+..|++|+........       + ..  +....+.|+     .|++..++.++.++|............... 
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~-------~-~~--~~~~~Dv~s-----lGvil~el~~g~~p~~~~~~~~~~~~~~~~~  224 (282)
T cd06643         160 RDSFIGTPYWMAPEVVMCETSK-------D-RP--YDYKADVWS-----LGITLIEMAQIEPPHHELNPMRVLLKIAKSE  224 (282)
T ss_pred             cccccccccccCHhhccccCCC-------C-CC--CCccchhhh-----HHHHHHHHccCCCCccccCHHHHHHHHhhcC
Confidence            2344577777777433210000       0 00  111223355     555555555555555432221111111000 


Q ss_pred             -ccccccCcCC---ccccccccccCCCCchHHHHhhcCcce
Q 019481          242 -ITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       242 -~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                       .....+...+   .++-..|++.||.+||+++++++|||+
T Consensus       225 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  265 (282)
T cd06643         225 PPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFV  265 (282)
T ss_pred             CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCE
Confidence             0000011111   223447899999999999999999999

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=4.7e-33  Score=245.39  Aligned_cols=241  Identities=17%  Similarity=0.031  Sum_probs=163.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc--hhhHHHHHHHHHHh---hhcCCCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP--LQLRRDDDGKLDSL---EEIFHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~~E~~~l---~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      .+|+||.||++.+..+++.+|+|.+.+...  ........+|..++   ...+||||++++++|..       .+..+++
T Consensus         3 g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~~lv   75 (279)
T cd05633           3 GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHT-------PDKLCFI   75 (279)
T ss_pred             ccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEec-------CCeEEEE
Confidence            478999999999999999999999875321  12223344454443   33479999999986643       3367799


Q ss_pred             eccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec
Q 019481           79 KWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      |||+++|+|.+++.....     +++..+..++.|++.||+|||+  ++|+||||||+|||++.++.+||+|||++....
T Consensus        76 ~e~~~~~~L~~~i~~~~~-----l~~~~~~~i~~qi~~al~~lH~--~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~  148 (279)
T cd05633          76 LDLMNGGDLHYHLSQHGV-----FSEKEMRFYATEIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDFS  148 (279)
T ss_pred             EecCCCCCHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCcCCCCCCHHHEEECCCCCEEEccCCcceecc
Confidence            999999999999987665     9999999999999999999999  789999999999999999999999999997654


Q ss_pred             ccCCcceeeccceeeccCcccc-chh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHH
Q 019481          159 VENADLTALDTSSVSAQSGKTG-MEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIA  236 (340)
Q Consensus       159 ~~~~~~~~~gt~~~~~p~~~~~-~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (340)
                      ... .....||..|++|+.... ... ...|+|+.|...+.+.++..+|.  .....           .   ....   .
T Consensus       149 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~--~~~~~-----------~---~~~~---~  208 (279)
T cd05633         149 KKK-PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFR--QHKTK-----------D---KHEI---D  208 (279)
T ss_pred             ccC-ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcC--CCCCc-----------C---HHHH---H
Confidence            332 223467888888865431 111 12356665555555444332221  11000           0   0000   0


Q ss_pred             HhhhhccccccCcCC---ccccccccccCCCCch-----HHHHhhcCcce
Q 019481          237 TLLSTITFLSALKIT---GCKSEEGYKNNSSLNP-----ICQIVNQHPFY  278 (340)
Q Consensus       237 ~~~~~~~~~~~~~~p---~~~~~~~l~~dP~~R~-----t~~~ll~hp~~  278 (340)
                      ...........+..+   ..+...||++||++|+     +++++++|||+
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~  258 (279)
T cd05633         209 RMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFF  258 (279)
T ss_pred             HHhhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccc
Confidence            000000000011111   1223478999999999     69999999999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=2.9e-33  Score=247.37  Aligned_cols=184  Identities=17%  Similarity=0.142  Sum_probs=149.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc-hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP-LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|++..+++.||+|++..... ....+.+.+|+.++++++||||++++++|.       +....++++||+
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-------~~~~~~~v~e~~   81 (286)
T cd07832           9 GEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFP-------HGSGFVLVMEYM   81 (286)
T ss_pred             ccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEe-------cCCeeEEEeccc
Confidence            468999999999999999999999875332 334567899999999999999999999765       345788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                       +++|.+++.....    .+++..++.++.||++||+|||+  .+++|+||||+||+++.++.++|+|||++........
T Consensus        82 -~~~L~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~  154 (286)
T cd07832          82 -PSDLSEVLRDEER----PLPEAQVKSYMRMLLKGVAYMHA--NGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP  154 (286)
T ss_pred             -CCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHH--CCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence             9999999976543    39999999999999999999999  7899999999999999999999999999987654331


Q ss_pred             --cceeeccceeeccCccccchh--hhhHhHhCCccccccccc
Q 019481          163 --DLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEK  201 (340)
Q Consensus       163 --~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~  201 (340)
                        .....|+..|++|+.+.+...  ...|+|+.|...+.+.++
T Consensus       155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg  197 (286)
T cd07832         155 RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNG  197 (286)
T ss_pred             CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcC
Confidence              234567888999976543221  235677766666665544

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=3.8e-33  Score=242.51  Aligned_cols=238  Identities=16%  Similarity=0.137  Sum_probs=169.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      +.|+||.||+|.+..+++.+|+|.+... ......+.+.+|++++++++||||+++++.|.       +....++++||+
T Consensus         9 g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-------~~~~~~lv~e~~   81 (256)
T cd08220           9 GRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFL-------EDKALMIVMEYA   81 (256)
T ss_pred             cccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEe-------cCCEEEEEEecC
Confidence            3688999999999999999999999753 23344677899999999999999999999664       344778999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCC-CceEEeccccceeecccC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDET-FKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~-~~~kl~DFGla~~~~~~~  161 (340)
                      ++++|.+++.....   ..+++..+..++.|++.||+|||+  ++++||||||+||+++.+ +.+||+|||++.......
T Consensus        82 ~~~~L~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lh~--~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~  156 (256)
T cd08220          82 PGGTLAEYIQKRCN---SLLDEDTILHFFVQILLALHHVHT--KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS  156 (256)
T ss_pred             CCCCHHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence            99999999987543   348999999999999999999999  889999999999999865 468999999998876655


Q ss_pred             CcceeeccceeeccCccccchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      ......|+..|++|+...+... ...|+|+.|...+.+.                     ++..+|..........    
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~---------------------~~~~~~~~~~~~~~~~----  211 (256)
T cd08220         157 KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELA---------------------SLKRAFEAANLPALVL----  211 (256)
T ss_pred             cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHH---------------------hCCCCcccCchHHHHH----
Confidence            4445667778888864322111 1224444443333332                     2222221111000000    


Q ss_pred             hccccccCcCCc-------cccccccccCCCCchHHHHhhcCcce
Q 019481          241 TITFLSALKITG-------CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~~~~~p~-------~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .+.....+.++.       .+...|++.||++|||+++++.|||+
T Consensus       212 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         212 KIMSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             HHHhcCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence            000011111111       23447899999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=1.5e-32  Score=238.85  Aligned_cols=235  Identities=18%  Similarity=0.150  Sum_probs=167.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||++++..+++.+|+|.++........+.+.+|+.++++++||||+++++.|.       +..+.++++||++
T Consensus         9 g~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~~~   81 (255)
T cd08219           9 GEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFE-------ADGHLYIVMEYCD   81 (255)
T ss_pred             eccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEE-------ECCEEEEEEeeCC
Confidence            358899999999999999999999976444455677889999999999999999999765       3347889999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-C
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-A  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~  162 (340)
                      +|+|.+++.....   ..+++..+..++.|++.||.|||+  ++|+|+||||+||+++.++.++|+|||+++...... .
T Consensus        82 ~~~l~~~~~~~~~---~~~~~~~~~~~~~~i~~al~~lH~--~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~  156 (255)
T cd08219          82 GGDLMQKIKLQRG---KLFPEDTILQWFVQMCLGVQHIHE--KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAY  156 (255)
T ss_pred             CCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHhh--CCcccCCCCcceEEECCCCcEEEcccCcceeecccccc
Confidence            9999999876433   348999999999999999999999  889999999999999999999999999998765432 2


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      .....|+..|++|+...+.... ..|+|+.|...+                     ++.++..||..........    .
T Consensus       157 ~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~---------------------~l~~g~~p~~~~~~~~~~~----~  211 (255)
T cd08219         157 ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILY---------------------ELCTLKHPFQANSWKNLIL----K  211 (255)
T ss_pred             cccccCCccccCHHHHccCCcCchhhhhhhchhhe---------------------ehhhccCCCCCCCHHHHHH----H
Confidence            2334567777777543221111 234444444444                     4444433333211110000    0


Q ss_pred             ccccccCcCCc-------cccccccccCCCCchHHHHhhcC
Q 019481          242 ITFLSALKITG-------CKSEEGYKNNSSLNPICQIVNQH  275 (340)
Q Consensus       242 ~~~~~~~~~p~-------~~~~~~l~~dP~~R~t~~~ll~h  275 (340)
                      +.....+.+|.       ++...|+++||.+||++.+++..
T Consensus       212 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         212 VCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            00111111122       23447899999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=1.7e-33  Score=248.86  Aligned_cols=184  Identities=16%  Similarity=0.110  Sum_probs=141.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc-hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP-LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|++..+++.||+|++..... ....+.+.+|++++++++||||++++++|.       +....++++||+
T Consensus        10 ~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-------~~~~~~~v~e~~   82 (286)
T cd07847          10 GEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFR-------RKRKLHLVFEYC   82 (286)
T ss_pred             cccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEe-------eCCEEEEEEecc
Confidence            368899999999999999999999875322 223456789999999999999999999765       334678999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-  161 (340)
                      ++++|..++.....     +++..++.++.|++.||+|||+  ++++||||||+||+++.++.+||+|||++....... 
T Consensus        83 ~~~~l~~~~~~~~~-----~~~~~~~~~~~ql~~~l~~LH~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  155 (286)
T cd07847          83 DHTVLNELEKNPRG-----VPEHLIKKIIWQTLQAVNFCHK--HNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD  155 (286)
T ss_pred             CccHHHHHHhCCCC-----CCHHHHHHHHHHHHHHHHHHHH--CCceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence            99888888776554     9999999999999999999999  889999999999999999999999999998775543 


Q ss_pred             CcceeeccceeeccCccccchh--hhhHhHhCCccccccccc
Q 019481          162 ADLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEK  201 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~  201 (340)
                      ......++..|++|+.+.+...  ...|+|+.|...+.+.++
T Consensus       156 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g  197 (286)
T cd07847         156 DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTG  197 (286)
T ss_pred             cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhC
Confidence            2223345666777754332111  123555555555444443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=6.7e-33  Score=244.15  Aligned_cols=236  Identities=19%  Similarity=0.150  Sum_probs=170.6

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      +.|+||.||+|++..+++.||+|+++........+.+.+|+.++++++||||+++++.+.       +....++++||++
T Consensus        13 g~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~~~   85 (277)
T cd06640          13 GKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-------KGTKLWIIMEYLG   85 (277)
T ss_pred             ccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-------ECCEEEEEEecCC
Confidence            478899999999999999999999986544455677899999999999999999999664       3447789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-C
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-A  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~  162 (340)
                      +|+|.+++... .     +++..+..++.|++.||+|||+  ++++|+||+|+||+++.++.++|+|||++....... .
T Consensus        86 ~~~L~~~i~~~-~-----l~~~~~~~~~~~l~~~l~~lh~--~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~  157 (277)
T cd06640          86 GGSALDLLRAG-P-----FDEFQIATMLKEILKGLDYLHS--EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK  157 (277)
T ss_pred             CCcHHHHHhcC-C-----CCHHHHHHHHHHHHHHHHHHHh--CCccCcCCChhhEEEcCCCCEEEcccccceeccCCccc
Confidence            99999998753 2     8999999999999999999999  889999999999999999999999999998765433 2


Q ss_pred             cceeeccceeeccCccccchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      .....++..|++|+...+... ...|+|+.|...+.+.++.  .|+...........+.                     
T Consensus       158 ~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~--~p~~~~~~~~~~~~~~---------------------  214 (277)
T cd06640         158 RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE--PPNSDMHPMRVLFLIP---------------------  214 (277)
T ss_pred             cccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCC--CCCCCcChHhHhhhhh---------------------
Confidence            223356777777754322211 1235555555554443333  2221111100000000                     


Q ss_pred             ccccccCcCC-------ccccccccccCCCCchHHHHhhcCccee
Q 019481          242 ITFLSALKIT-------GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       242 ~~~~~~~~~p-------~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                        ....+..+       ..+...|++.||.+||+++++++|||+.
T Consensus       215 --~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~  257 (277)
T cd06640         215 --KNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIV  257 (277)
T ss_pred             --cCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhh
Confidence              00011111       1234478999999999999999999993

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=1.3e-32  Score=244.12  Aligned_cols=240  Identities=16%  Similarity=0.115  Sum_probs=169.6

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|++..+++.+|+|.+.... ....+.+.+|++++++++||||+++++.|..       ....+++|||++
T Consensus        21 g~g~~g~vy~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~~lv~e~~~   92 (292)
T cd06644          21 GDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYMVEIEILATCNHPYIVKLLGAFYW-------DGKLWIMIEFCP   92 (292)
T ss_pred             cCCCCeEEEEEEECCCCceEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe-------CCeEEEEEecCC
Confidence            46899999999999999999999997533 3456778899999999999999999997653       336789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-CC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-NA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~~  162 (340)
                      +++|..++.+...    .+++..+..++.|++.||+|||+  .+++||||||+||+++.++++||+|||++...... ..
T Consensus        93 ~~~l~~~~~~~~~----~l~~~~~~~~~~ql~~~l~~lH~--~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~  166 (292)
T cd06644          93 GGAVDAIMLELDR----GLTEPQIQVICRQMLEALQYLHS--MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQR  166 (292)
T ss_pred             CCcHHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhc--CCeeecCCCcceEEEcCCCCEEEccCccceeccccccc
Confidence            9999988866443    38999999999999999999999  78999999999999999999999999998764332 22


Q ss_pred             cceeeccceeeccCccccch------hhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHH
Q 019481          163 DLTALDTSSVSAQSGKTGME------MKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIA  236 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~------~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (340)
                      .....++..|++|+.+.+-.      -...|+|+.                     |++..++.++..+|..........
T Consensus       167 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~sl---------------------G~il~el~~g~~p~~~~~~~~~~~  225 (292)
T cd06644         167 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSL---------------------GITLIEMAQIEPPHHELNPMRVLL  225 (292)
T ss_pred             cceecCCccccCceeeccccccCCCCCchhhhHhH---------------------HHHHHHHhcCCCCCccccHHHHHH
Confidence            23455777788885432110      012344444                     444444444444433221111101


Q ss_pred             Hhhhhcccc---ccCcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          237 TLLSTITFL---SALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       237 ~~~~~~~~~---~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      .. ......   .....+   .++...|++.||++||+++++++|||+.
T Consensus       226 ~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~  273 (292)
T cd06644         226 KI-AKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVS  273 (292)
T ss_pred             HH-hcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence            00 000000   000111   1124478999999999999999999993

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=4.7e-33  Score=245.89  Aligned_cols=186  Identities=19%  Similarity=0.143  Sum_probs=144.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc-hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP-LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      +.|++|.||+|++..+++.||+|.++.... ....+.+.+|++++++++||||+++++++.       +....++++||+
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-------~~~~~~~v~e~~   81 (284)
T cd07860           9 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-------TENKLYLVFEFL   81 (284)
T ss_pred             cCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcc-------cCCcEEEEeecc
Confidence            468999999999999999999999875322 223356889999999999999999999764       344678999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      . ++|.+++.....   ..+++..+..++.|++.||+|||+  .+++||||||+||+++.++.+||+|||+++.......
T Consensus        82 ~-~~l~~~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lh~--~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~  155 (284)
T cd07860          82 H-QDLKKFMDASPL---SGIPLPLIKSYLFQLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR  155 (284)
T ss_pred             c-cCHHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc
Confidence            6 689998876443   348999999999999999999999  7899999999999999999999999999976544322


Q ss_pred             -cceeeccceeeccCccccchh--hhhHhHhCCcccccccccc
Q 019481          163 -DLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 -~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~~  202 (340)
                       .....++..|++|+.+.+...  ...|+|+.|...+.+.++.
T Consensus       156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~  198 (284)
T cd07860         156 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR  198 (284)
T ss_pred             ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCC
Confidence             223356777888875443221  2356666666666555444

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=3e-33  Score=247.66  Aligned_cols=245  Identities=16%  Similarity=0.104  Sum_probs=168.9

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||++++..+++.||+|.+...........+.+|+.++.++. ||||+++++++.       ++...++++||+
T Consensus        13 g~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~-------~~~~~~~~~e~~   85 (288)
T cd06616          13 GRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALF-------REGDCWICMELM   85 (288)
T ss_pred             CCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEe-------cCCcEEEEEecc
Confidence            368999999999999999999999976444455667889999999996 999999999654       344677899998


Q ss_pred             cCCCHHHHhc---ccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           83 QKKGLENVHI---GEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        83 ~~gsL~~~l~---~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      . +++.++..   ....   ..+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||+|||+++....
T Consensus        86 ~-~~l~~l~~~~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~-~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~  160 (288)
T cd06616          86 D-ISLDKFYKYVYEVLK---SVIPEEILGKIAVATVKALNYLKEE-LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVD  160 (288)
T ss_pred             c-CCHHHHHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhhc-CCeeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence            6 46655432   2211   3499999999999999999999971 2699999999999999999999999999986655


Q ss_pred             cCCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          160 ENADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      ........|+..|++|+.+.+..          ...+  ....+.|+     .|++..++.+|..||........   ..
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~----------~~~~--~~~~Di~s-----lG~il~el~~g~~p~~~~~~~~~---~~  220 (288)
T cd06616         161 SIAKTRDAGCRPYMAPERIDPSA----------RDGY--DVRSDVWS-----LGITLYEVATGKFPYPKWNSVFD---QL  220 (288)
T ss_pred             CCccccccCccCccCHHHhcccc----------ccCC--cchhhhhH-----HHHHHHHHHhCCCCchhcchHHH---HH
Confidence            44344446777777775433220          0000  11122344     45555555555555544321110   11


Q ss_pred             hhccccccCcCC-----------ccccccccccCCCCchHHHHhhcCcceee
Q 019481          240 STITFLSALKIT-----------GCKSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       240 ~~~~~~~~~~~p-----------~~~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                      ..+.....+.++           .++...|+++||++|||++++++|||+..
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  272 (288)
T cd06616         221 TQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD  272 (288)
T ss_pred             hhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence            111111111111           12345789999999999999999999933

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=2e-33  Score=245.19  Aligned_cols=159  Identities=19%  Similarity=0.180  Sum_probs=132.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc--hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP--LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||++++..+++.+|+|++.....  ....+.+.+|++++++++||||+++++.+.       +....++++||
T Consensus         2 g~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-------~~~~~~lv~e~   74 (265)
T cd05579           2 SKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQ-------GKKNLYLVMEY   74 (265)
T ss_pred             CCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhee-------cCcEEEEEEec
Confidence            368999999999999999999999975321  244567889999999999999999998654       44477899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++++|.+++.+...     +++..+..++.||++||+|||+  ++++||||+|+||+++.++.+||+|||++.......
T Consensus        75 ~~~~~L~~~l~~~~~-----~~~~~~~~i~~qi~~~L~~lH~--~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~  147 (265)
T cd05579          75 LPGGDLASLLENVGS-----LDEDVARIYIAEIVLALEYLHS--NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRR  147 (265)
T ss_pred             CCCCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--cCeecCCCCHHHeEEcCCCCEEEEecccchhcccCc
Confidence            999999999987665     9999999999999999999999  889999999999999999999999999987543321


Q ss_pred             ---------CcceeeccceeeccC
Q 019481          162 ---------ADLTALDTSSVSAQS  176 (340)
Q Consensus       162 ---------~~~~~~gt~~~~~p~  176 (340)
                               ......++..|++|+
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~Pe  171 (265)
T cd05579         148 QINLNDDEKEDKRIVGTPDYIAPE  171 (265)
T ss_pred             ccccccccccccCcccCccccCHH
Confidence                     112234566677664

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=6e-33  Score=242.58  Aligned_cols=242  Identities=19%  Similarity=0.156  Sum_probs=170.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|.+..+++.+|+|.+.........+.+.+|++++++++||||+++++.+..       ...+++++||++
T Consensus        10 g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-------~~~~~lv~e~~~   82 (265)
T cd06605          10 GAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYN-------NGDISICMEYMD   82 (265)
T ss_pred             cCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeec-------CCEEEEEEEecC
Confidence            4689999999999999999999999865444566778999999999999999999996643       357889999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhc-CCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHS-SEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      +++|.+++.....    .+++..+..++.|+++||+|||+ .+  ++||||||+||+++.++.+||+|||.+........
T Consensus        83 ~~~L~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lH~~~~--i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~  156 (265)
T cd06605          83 GGSLDKILKEVQG----RIPERILGKIAVAVLKGLTYLHEKHK--IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA  156 (265)
T ss_pred             CCcHHHHHHHccC----CCCHHHHHHHHHHHHHHHHHHcCCCC--eecCCCCHHHEEECCCCCEEEeecccchhhHHHHh
Confidence            9999999987632    38999999999999999999999 66  99999999999999999999999999876643322


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      . ...++..|++|+...+.... ..|+|+.|...+.+..+..+|.......              ......      ...
T Consensus       157 ~-~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~--------------~~~~~~------~~~  215 (265)
T cd06605         157 K-TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP--------------DGIFEL------LQY  215 (265)
T ss_pred             h-cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc--------------ccHHHH------HHH
Confidence            2 25677778888533222111 1244444444333332221121100000              000000      000


Q ss_pred             ccccccCcCCc--------cccccccccCCCCchHHHHhhcCccee
Q 019481          242 ITFLSALKITG--------CKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       242 ~~~~~~~~~p~--------~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      +.....+..+.        .+...|+..||.+|||+++++.|||+.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~  261 (265)
T cd06605         216 IVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIK  261 (265)
T ss_pred             HhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhh
Confidence            01111122222        123468999999999999999999993

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=3.9e-33  Score=242.46  Aligned_cols=240  Identities=20%  Similarity=0.164  Sum_probs=167.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|+...+++.+|+|.+....   ..+.+.+|++++++++||||++++++|..       ...+++++||++
T Consensus        12 ~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-------~~~~~l~~e~~~   81 (256)
T cd06612          12 GEGSYGSVYKAIHKETGQVVAIKVVPVEE---DLQEIIKEISILKQCDSPYIVKYYGSYFK-------NTDLWIVMEYCG   81 (256)
T ss_pred             cCCCCeEEEEEEEcCCCcEEEEEEeecHH---HHHHHHHHHHHHHhCCCCcEeeeeeeeec-------CCcEEEEEecCC
Confidence            46889999999999889999999996432   26779999999999999999999997653       347889999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-C
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-A  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~  162 (340)
                      +++|.+++.....    .+++..+..++.|++.||.|||+  .+++||||+|+||+++.++.+||+|||++....... .
T Consensus        82 ~~~L~~~l~~~~~----~l~~~~~~~~~~~l~~~l~~lh~--~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~  155 (256)
T cd06612          82 AGSVSDIMKITNK----TLTEEEIAAILYQTLKGLEYLHS--NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAK  155 (256)
T ss_pred             CCcHHHHHHhCcc----CCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCcceEEECCCCcEEEcccccchhcccCccc
Confidence            9999999976543    38999999999999999999999  779999999999999999999999999998765543 2


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      .....|+..|++|+...+.+.. ..|+|+.|...+.+.++.  .|+...........+...                 ..
T Consensus       156 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~--~p~~~~~~~~~~~~~~~~-----------------~~  216 (256)
T cd06612         156 RNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGK--PPYSDIHPMRAIFMIPNK-----------------PP  216 (256)
T ss_pred             cccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCC--CCCCCcchhhhhhhhccC-----------------CC
Confidence            2334567778887533322221 234444444444333222  121111000000000000                 00


Q ss_pred             ccccccCcCC---ccccccccccCCCCchHHHHhhcCcce
Q 019481          242 ITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       242 ~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .........+   .++...|++.||.+|||++++++|||+
T Consensus       217 ~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         217 PTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             CCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence            0000000111   123447889999999999999999996

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=3.3e-33  Score=256.29  Aligned_cols=164  Identities=21%  Similarity=0.155  Sum_probs=129.2

Q ss_pred             CCCcceEEEEEEc-----CCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeee
Q 019481            4 SAPSFSVLIHVPF-----PDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWK   77 (340)
Q Consensus         4 ~~G~fg~V~~~~~-----~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~   77 (340)
                      .+|+||.||+|+.     ..++..||+|+++........+.+.+|+++++.+ +||||+++++++..       ....++
T Consensus        44 G~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~-------~~~~~l  116 (375)
T cd05104          44 GAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTV-------GGPTLV  116 (375)
T ss_pred             cCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc-------CCccee
Confidence            4789999999974     4567789999997544344556788999999999 89999999997653       336779


Q ss_pred             eeccccCCCHHHHhcccCCC------------------------------------------------------------
Q 019481           78 NKWLMQKKGLENVHIGEHPA------------------------------------------------------------   97 (340)
Q Consensus        78 ~~e~~~~gsL~~~l~~~~~~------------------------------------------------------------   97 (340)
                      +|||+++|+|.++++.....                                                            
T Consensus       117 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (375)
T cd05104         117 ITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYID  196 (375)
T ss_pred             eehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecc
Confidence            99999999999999753210                                                            


Q ss_pred             ----------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCcc---
Q 019481           98 ----------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADL---  164 (340)
Q Consensus        98 ----------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~---  164 (340)
                                ....+++..+..++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+++.........   
T Consensus       197 ~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~--~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~  274 (375)
T cd05104         197 QDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS--KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKG  274 (375)
T ss_pred             cccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH--CCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccC
Confidence                      01247889999999999999999999  889999999999999999999999999998765432111   


Q ss_pred             eeeccceeeccC
Q 019481          165 TALDTSSVSAQS  176 (340)
Q Consensus       165 ~~~gt~~~~~p~  176 (340)
                      ...++..|++|+
T Consensus       275 ~~~~~~~y~aPE  286 (375)
T cd05104         275 NARLPVKWMAPE  286 (375)
T ss_pred             CCCCCcceeChh
Confidence            122344577775

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.7e-34  Score=272.50  Aligned_cols=243  Identities=16%  Similarity=0.100  Sum_probs=184.1

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeec-cC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHEL-IT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~-~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.|..++++.|+++||+|++++ .. .......|..|-++|..-+.+=|++++.+|+       |..|.|+||||
T Consensus        84 GrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ-------D~~~LYlVMdY  156 (1317)
T KOG0612|consen   84 GRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ-------DERYLYLVMDY  156 (1317)
T ss_pred             cccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc-------CccceEEEEec
Confidence            369999999999999999999999986 11 1233455788999999999999999999776       66699999999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      |+||+|-.++.+...     +|++.++.|+..|+.||.-||+  -|.|||||||+|||+|..|++||+|||.+-.+..+.
T Consensus       157 ~pGGDlltLlSk~~~-----~pE~~ArFY~aEiVlAldslH~--mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG  229 (1317)
T KOG0612|consen  157 MPGGDLLTLLSKFDR-----LPEDWARFYTAEIVLALDSLHS--MGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADG  229 (1317)
T ss_pred             ccCchHHHHHhhcCC-----ChHHHHHHHHHHHHHHHHHHHh--ccceeccCCcceeEecccCcEeeccchhHHhcCCCC
Confidence            999999999999886     9999999999999999999999  669999999999999999999999999987776433


Q ss_pred             --CcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          162 --ADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       162 --~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                        ...+.+|||.|++|      |+.-..  .+|..-  ++...+=|+     +|.+.++|.-|..||-.-.-+   .+.-
T Consensus       230 ~V~s~~aVGTPDYISP------EvLqs~--~~~~g~--yG~ecDwWS-----lGV~~YEMlyG~TPFYadslv---eTY~  291 (1317)
T KOG0612|consen  230 TVRSSVAVGTPDYISP------EVLQSQ--GDGKGE--YGRECDWWS-----LGVFMYEMLYGETPFYADSLV---ETYG  291 (1317)
T ss_pred             cEEeccccCCCCccCH------HHHHhh--cCCccc--cCCccchhh-----hHHHHHHHHcCCCcchHHHHH---HHHH
Confidence              24456788888877      443221  012122  233333377     777777777777776543333   2222


Q ss_pred             hhccccccCcCC--ccccccc------cccCCCCchH---HHHhhcCcce
Q 019481          240 STITFLSALKIT--GCKSEEG------YKNNSSLNPI---CQIVNQHPFY  278 (340)
Q Consensus       240 ~~~~~~~~~~~p--~~~~~~~------l~~dP~~R~t---~~~ll~hp~~  278 (340)
                      ..+++......|  ...|++.      |--+|+.|..   ++++..||||
T Consensus       292 KIm~hk~~l~FP~~~~VSeeakdLI~~ll~~~e~RLgrngiedik~HpFF  341 (1317)
T KOG0612|consen  292 KIMNHKESLSFPDETDVSEEAKDLIEALLCDREVRLGRNGIEDIKNHPFF  341 (1317)
T ss_pred             HHhchhhhcCCCcccccCHHHHHHHHHHhcChhhhcccccHHHHHhCccc
Confidence            223333334444  2234422      6667999998   9999999999

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=5.2e-33  Score=246.13  Aligned_cols=253  Identities=15%  Similarity=0.084  Sum_probs=170.6

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      +.|++|.||+|.+..+++.+|+|.+...........+.+|++++++++||||++++++|..     .+....++++||++
T Consensus        10 g~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~~~lv~e~~~   84 (287)
T cd06621          10 GEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLD-----ESSSSIGIAMEYCE   84 (287)
T ss_pred             ccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEc-----cCCCeEEEEEEecC
Confidence            4689999999999999999999999864444556778999999999999999999997642     23446789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +++|.+++..... ....+++..+..++.||+.||.|||+  .+++|+||+|+||+++.++.+||+|||++........ 
T Consensus        85 ~~~L~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~~lH~--~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~-  160 (287)
T cd06621          85 GGSLDSIYKKVKK-RGGRIGEKVLGKIAESVLKGLSYLHS--RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA-  160 (287)
T ss_pred             CCCHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEEecCCeEEEeecccccccccccc-
Confidence            9999988754211 01348999999999999999999999  7799999999999999999999999999876543222 


Q ss_pred             ceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhc
Q 019481          164 LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTI  242 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  242 (340)
                      ....++..|++|+...+.... ..|+|+.|...+.+.++.  .|+......     ..   .+.. ....   .......
T Consensus       161 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~--~p~~~~~~~-----~~---~~~~-~~~~---~~~~~~~  226 (287)
T cd06621         161 GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNR--FPFPPEGEP-----PL---GPIE-LLSY---IVNMPNP  226 (287)
T ss_pred             ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCC--CCCCcccCC-----CC---ChHH-HHHH---HhcCCch
Confidence            234567777887543322111 235555554444443333  222111000     00   0000 0000   0000000


Q ss_pred             cccccCc----CC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          243 TFLSALK----IT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       243 ~~~~~~~----~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      .....+.    .+   ..+...|+++||++|||++++++|||+.
T Consensus       227 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~  270 (287)
T cd06621         227 ELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIK  270 (287)
T ss_pred             hhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccc
Confidence            0000000    00   1334478999999999999999999993

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=3.9e-33  Score=248.14  Aligned_cols=240  Identities=18%  Similarity=0.105  Sum_probs=171.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|++..+++.||+|.+..... ...+.+.+|+.+++.++||||++++++|.       +..+.++++||++
T Consensus        28 g~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-------~~~~~~lv~e~~~   99 (297)
T cd06656          28 GQGASGTVYTAIDIATGQEVAIKQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSYL-------VGDELWVVMEYLA   99 (297)
T ss_pred             ccCCCeEEEEEEECCCCCEEEEEEEecCcc-chHHHHHHHHHHHHhCCCCCEeeEEEEEe-------cCCEEEEeecccC
Confidence            368899999999999999999999975332 33466789999999999999999999765       3347789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC-
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA-  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~-  162 (340)
                      +++|.+++.+..      +++..+..++.|++.||.|||+  .+++||||||+||+++.++.+||+|||++........ 
T Consensus       100 ~~~L~~~~~~~~------~~~~~~~~~~~~l~~~L~~LH~--~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~  171 (297)
T cd06656         100 GGSLTDVVTETC------MDEGQIAAVCRECLQALDFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK  171 (297)
T ss_pred             CCCHHHHHHhCC------CCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEEECcCccceEccCCccC
Confidence            999999987532      7899999999999999999999  7799999999999999999999999999987654332 


Q ss_pred             cceeeccceeeccCccccchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCcc-CCchh--HHH-HHHHHHHHH
Q 019481          163 DLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLK-TENET--WNN-FLYLLLIAT  237 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~--~~~-~~~~~~~~~  237 (340)
                      .....|++.|++|+...+... ...|+|+.|...+...++.  .||...........+. .+.++  .+. ....     
T Consensus       172 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~--~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  244 (297)
T cd06656         172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE--PPYLNENPLRALYLIATNGTPELQNPERLSAV-----  244 (297)
T ss_pred             cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCC--CCCCCCCcchheeeeccCCCCCCCCccccCHH-----
Confidence            223467778888864433222 1345666555555544433  3332211110000000 01000  000 0000     


Q ss_pred             hhhhccccccCcCCccccccccccCCCCchHHHHhhcCccee
Q 019481          238 LLSTITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       238 ~~~~~~~~~~~~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                                   -.++...|++.||++||+++++++|||+.
T Consensus       245 -------------~~~li~~~l~~~p~~Rps~~~il~~~~~~  273 (297)
T cd06656         245 -------------FRDFLNRCLEMDVDRRGSAKELLQHPFLK  273 (297)
T ss_pred             -------------HHHHHHHHccCChhhCcCHHHHhcCchhc
Confidence                         01234478999999999999999999994

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=5.2e-33  Score=243.13  Aligned_cols=237  Identities=16%  Similarity=0.070  Sum_probs=166.1

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC-----chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT-----PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~-----~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      ..|+||.||+|.. .+++.+|+|.++...     .....+.+.+|++++++++|+||+++++++.       +....+++
T Consensus         9 g~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-------~~~~~~lv   80 (265)
T cd06631           9 GKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCL-------DDNTISIF   80 (265)
T ss_pred             eccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEee-------cCCeEEEE
Confidence            4689999999987 467889999987422     1223456889999999999999999999764       33478899


Q ss_pred             eccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec
Q 019481           79 KWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      +||+++++|.+++.+...     +++..+..++.|++.||+|||+  .+|+|+||||+||++++++.+||+|||+++...
T Consensus        81 ~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  153 (265)
T cd06631          81 MEFVPGGSISSILNRFGP-----LPEPVFCKYTKQILDGVAYLHN--NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLA  153 (265)
T ss_pred             EecCCCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCcccCCcCHHhEEECCCCeEEeccchhhHhhh
Confidence            999999999999987665     8999999999999999999999  789999999999999999999999999987543


Q ss_pred             cc-------CCcceeeccceeeccCccccchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHH
Q 019481          159 VE-------NADLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFL  230 (340)
Q Consensus       159 ~~-------~~~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  230 (340)
                      ..       .......|+..|++|+.+.+... ...|+|+.|...+.+.+                     |..||....
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~---------------------g~~p~~~~~  212 (265)
T cd06631         154 WVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMAT---------------------GKPPLASMD  212 (265)
T ss_pred             hccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHh---------------------CCCccccCC
Confidence            21       11123356777777764433222 12355554444444333                     333332211


Q ss_pred             HHHHHHHhhhhccccccCcCCc-------cccccccccCCCCchHHHHhhcCcce
Q 019481          231 YLLLIATLLSTITFLSALKITG-------CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~p~-------~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .........  ......+.++.       .+...|++.||++||++.++++|||+
T Consensus       213 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         213 RLAAMFYIG--AHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             hHHHHHHhh--hccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            110000000  00001122222       23457899999999999999999996

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=2.8e-33  Score=247.15  Aligned_cols=245  Identities=18%  Similarity=0.137  Sum_probs=164.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHH-hhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDS-LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~-l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|++..+++.||+|+++..........+..|+.+ ++.++||||+++++++..       ....++++||+
T Consensus        10 g~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~-------~~~~~lv~e~~   82 (283)
T cd06617          10 GRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFR-------EGDVWICMEVM   82 (283)
T ss_pred             cccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEec-------CCcEEEEhhhh
Confidence            3689999999999999999999999764333334556667765 666789999999997653       33677999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCC-ceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEK-QVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~-~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      + |+|.+++...... ...+++..+..++.||+.||+|||+  + +++||||||+||+++.++.+||+|||+++......
T Consensus        83 ~-~~l~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~--~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~  158 (283)
T cd06617          83 D-TSLDKFYKKVYDK-GLTIPEDILGKIAVSIVKALEYLHS--KLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV  158 (283)
T ss_pred             c-ccHHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHhh--cCCeecCCCCHHHEEECCCCCEEEeeccccccccccc
Confidence            7 6888887653211 1358999999999999999999999  6 79999999999999999999999999998765433


Q ss_pred             CcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      ......|+..|++|+.+.+....           ..+....+.|+     .|++..++.++..||........   ....
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~~~~-----------~~~~~~~Di~s-----lG~~l~~l~~g~~p~~~~~~~~~---~~~~  219 (283)
T cd06617         159 AKTIDAGCKPYMAPERINPELNQ-----------KGYDVKSDVWS-----LGITMIELATGRFPYDSWKTPFQ---QLKQ  219 (283)
T ss_pred             ccccccCCccccChhhcCCcccc-----------cccCccccchh-----hHHHHHHHHhCCCCCCccccCHH---HHHH
Confidence            33334577777777543221100           00001122244     44444444444444322110000   0000


Q ss_pred             ccccccCcC-----Cc---cccccccccCCCCchHHHHhhcCcce
Q 019481          242 ITFLSALKI-----TG---CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       242 ~~~~~~~~~-----p~---~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ......+.+     |.   .+...|+..||.+||+++++++|||+
T Consensus       220 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~  264 (283)
T cd06617         220 VVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFF  264 (283)
T ss_pred             HHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchh
Confidence            000111111     11   22346899999999999999999999

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=1e-32  Score=244.62  Aligned_cols=184  Identities=15%  Similarity=0.096  Sum_probs=141.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|.+..+++.||+|++...........+.+|+++++.++|+||+++++++.       +....++++||+. 
T Consensus        15 ~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~-------~~~~~~lv~e~~~-   86 (291)
T cd07870          15 EGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIH-------TKETLTFVFEYMH-   86 (291)
T ss_pred             ecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEe-------cCCeEEEEEeccc-
Confidence            68899999999999999999999975433333446788999999999999999999764       3346779999996 


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-CCc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-NAD  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~~~  163 (340)
                      ++|.+.+.....    .+++..+..++.|+++||.|||+  .+|+||||||+||+++.++++||+|||+++..... ...
T Consensus        87 ~~l~~~~~~~~~----~~~~~~~~~~~~qi~~~L~~lH~--~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~  160 (291)
T cd07870          87 TDLAQYMIQHPG----GLHPYNVRLFMFQLLRGLAYIHG--QHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTY  160 (291)
T ss_pred             CCHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCC
Confidence            688777665432    37888999999999999999999  78999999999999999999999999999764332 222


Q ss_pred             ceeeccceeeccCccccch--hhhhHhHhCCcccccccccc
Q 019481          164 LTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~  202 (340)
                      ....++..|++|+...+..  -...|+|+.|...+.+.++.
T Consensus       161 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~  201 (291)
T cd07870         161 SSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQ  201 (291)
T ss_pred             CCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            3345678888887543211  11346666666666554443

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=5e-33  Score=243.21  Aligned_cols=243  Identities=19%  Similarity=0.188  Sum_probs=168.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|....++..+|+|++.........+.+.+|+++++.++|+||+++++.+.       +....++++|+++
T Consensus        10 g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-------~~~~~~iv~e~~~   82 (267)
T cd06610          10 GVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFV-------VGDELWLVMPYLS   82 (267)
T ss_pred             cCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEe-------eCCEEEEEEeccC
Confidence            468899999999988999999999976443446678899999999999999999998654       3447789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +++|.+++.....  ...+++..+..++.|++.||.|||+  ++|+||||||+||++++++.+||+|||++..+......
T Consensus        83 ~~~l~~~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lh~--~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~  158 (267)
T cd06610          83 GGSLLDIMKSSYP--RGGLDEAIIATVLKEVLKGLEYLHS--NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR  158 (267)
T ss_pred             CCcHHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc
Confidence            9999999976432  1248999999999999999999999  77999999999999999999999999998766543222


Q ss_pred             -----ceeeccceeeccCccccc--hhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHH
Q 019481          164 -----LTALDTSSVSAQSGKTGM--EMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIA  236 (340)
Q Consensus       164 -----~~~~gt~~~~~p~~~~~~--~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (340)
                           ....|+..|++|+.....  .-...|+                |+     .|++..++.+|..||..........
T Consensus       159 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv----------------~s-----lG~i~~~l~~g~~p~~~~~~~~~~~  217 (267)
T cd06610         159 TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADI----------------WS-----FGITAIELATGAAPYSKYPPMKVLM  217 (267)
T ss_pred             cccccccccCChhhcChHHHccccCcCcccch----------------Hh-----HhHHHHHHHhCCCCccccChhhhHH
Confidence                 234567777777432211  0001133                33     3333333333333332211110000


Q ss_pred             Hhhhhc--ccccc---CcCC---ccccccccccCCCCchHHHHhhcCcce
Q 019481          237 TLLSTI--TFLSA---LKIT---GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       237 ~~~~~~--~~~~~---~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ......  .....   ..++   .++...|+++||++||+++++++|||+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         218 LTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             HHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence            000000  00000   0111   123447899999999999999999996

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=1.4e-33  Score=250.36  Aligned_cols=240  Identities=17%  Similarity=0.124  Sum_probs=168.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      +.|+||.||++.+..+++.||+|.++... ....+.+.+|+.++++++||||+++++.|.       +.++.++++||++
T Consensus        31 g~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-------~~~~~~lv~e~~~  102 (292)
T cd06658          31 GEGSTGIVCIATEKHTGKQVAVKKMDLRK-QQRRELLFNEVVIMRDYHHENVVDMYNSYL-------VGDELWVVMEFLE  102 (292)
T ss_pred             cCCCCeEEEEEEECCCCCEEEEEEEecch-HHHHHHHHHHHHHHHhCCCCcHHHHHHhee-------cCCeEEEEEeCCC
Confidence            47899999999999999999999986432 344566889999999999999999999664       3346789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-C
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-A  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~  162 (340)
                      +++|.+++... .     +++..+..++.||+.||+|||+  ++|+||||||+||+++.++.+||+|||++....... .
T Consensus       103 ~~~L~~~~~~~-~-----l~~~~~~~~~~qi~~~l~~LH~--~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~  174 (292)
T cd06658         103 GGALTDIVTHT-R-----MNEEQIATVCLSVLRALSYLHN--QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK  174 (292)
T ss_pred             CCcHHHHHhcC-C-----CCHHHHHHHHHHHHHHHHHHHH--CCEeecCCCHHHEEEcCCCCEEEccCcchhhccccccc
Confidence            99999988643 2     8999999999999999999999  889999999999999999999999999987654322 2


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      .....|+..|++|+...+.... ..|+|+.|...+.+..+.  .|+.....             ......   .. ....
T Consensus       175 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~--~p~~~~~~-------------~~~~~~---~~-~~~~  235 (292)
T cd06658         175 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE--PPYFNEPP-------------LQAMRR---IR-DNLP  235 (292)
T ss_pred             CceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCC--CCCCCCCH-------------HHHHHH---HH-hcCC
Confidence            3345678888888644322111 235555555554443333  22211100             000000   00 0000


Q ss_pred             ccccccCcCC---ccccccccccCCCCchHHHHhhcCcce
Q 019481          242 ITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       242 ~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .........+   .++-..|++.||.+|||++++++|||+
T Consensus       236 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  275 (292)
T cd06658         236 PRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFL  275 (292)
T ss_pred             CccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhh
Confidence            0000000011   122346788999999999999999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=6.2e-33  Score=252.79  Aligned_cols=186  Identities=17%  Similarity=0.113  Sum_probs=143.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|++..+++.||+|.+.+. ......+.+.+|+.++++++||||++++++|...... .+....++++||+
T Consensus        25 g~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-~~~~~~~lv~e~~  103 (353)
T cd07850          25 GSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSL-EEFQDVYLVMELM  103 (353)
T ss_pred             ccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCc-cccCcEEEEEecc
Confidence            4688999999999999999999998642 2233445677899999999999999999988654322 2334578999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      . ++|.+.+...       +++..+..++.|++.||+|||+  ++|+||||||+||+++.++.+||+|||+++.......
T Consensus       104 ~-~~l~~~~~~~-------l~~~~~~~~~~ql~~aL~~LH~--~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~  173 (353)
T cd07850         104 D-ANLCQVIQMD-------LDHERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM  173 (353)
T ss_pred             C-CCHHHHHhhc-------CCHHHHHHHHHHHHHHHHHHHh--CCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCCC
Confidence            6 5888887632       7889999999999999999999  7899999999999999999999999999987765444


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCcccccccc
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAE  200 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~  200 (340)
                      .....++..|++|+...+.++. ..|+|+.|...+.+..
T Consensus       174 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~  212 (353)
T cd07850         174 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR  212 (353)
T ss_pred             CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHH
Confidence            4455678888888643322221 1255555555444433

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=3.9e-33  Score=252.24  Aligned_cols=185  Identities=17%  Similarity=0.163  Sum_probs=142.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|++.... .....+.+.+|+.++++++||||++++++|....   .+....++++||+.
T Consensus        15 ~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---~~~~~~~lv~e~~~   91 (334)
T cd07855          15 SGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG---ADFKDVYVVMDLME   91 (334)
T ss_pred             cCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC---CCCceEEEEEehhh
Confidence            5889999999999999999999987532 2234566788999999999999999999876432   23457889999995


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                       |+|.+++.....     +++..+..++.||+.||+|||+  ++|+||||||+||+++.++.+||+|||+++........
T Consensus        92 -~~l~~~~~~~~~-----~~~~~~~~i~~qi~~aL~~LH~--~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~  163 (334)
T cd07855          92 -SDLHHIIHSDQP-----LTEEHIRYFLYQLLRGLKYIHS--ANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTE  163 (334)
T ss_pred             -hhHHHHhccCCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEEcCCCcEEecccccceeecccCcC
Confidence             699999987655     9999999999999999999999  77999999999999999999999999999876543211


Q ss_pred             -----ceeeccceeeccCccccchh--hhhHhHhCCcccccccc
Q 019481          164 -----LTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAE  200 (340)
Q Consensus       164 -----~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~  200 (340)
                           ....|+..|++|+.+.+...  ...|+|+.|...+.+..
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~  207 (334)
T cd07855         164 HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLG  207 (334)
T ss_pred             CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHc
Confidence                 23356777777754332111  12355555555544433

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=6e-33  Score=245.34  Aligned_cols=249  Identities=16%  Similarity=0.120  Sum_probs=173.1

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||++.+..+++.||+|++.........+.+.+|+++++.++||||+++++++..       ....++++||++
T Consensus        14 g~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~~~~~lv~e~~~   86 (284)
T cd06620          14 GAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLN-------ENNICMCMEFMD   86 (284)
T ss_pred             CCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEec-------CCEEEEEEecCC
Confidence            4688999999999999999999998765445556788999999999999999999997653       347789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +|+|.+++...+.     +++..+..++.|++.||.|||+. .+++||||||+||+++.++.++|+|||++....... .
T Consensus        87 ~~~L~~~~~~~~~-----~~~~~~~~~~~~i~~~l~~LH~~-~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~-~  159 (284)
T cd06620          87 CGSLDRIYKKGGP-----IPVEILGKIAVAVVEGLTYLYNV-HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI-A  159 (284)
T ss_pred             CCCHHHHHHhccC-----CCHHHHHHHHHHHHHHHHHHHHh-cCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc-c
Confidence            9999999987655     89999999999999999999961 359999999999999999999999999987653322 2


Q ss_pred             ceeeccceeeccCccccchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhc
Q 019481          164 LTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTI  242 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  242 (340)
                      ....|+..|++|+...+... ...|+|+.|...+.+.++..+|.  .......      ...........      ...+
T Consensus       160 ~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~--~~~~~~~------~~~~~~~~~~~------~~~~  225 (284)
T cd06620         160 DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFA--FSNIDDD------GQDDPMGILDL------LQQI  225 (284)
T ss_pred             CccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCc--ccchhhh------hhhhhhHHHHH------HHHH
Confidence            24467777888754332211 12355555555544433332222  1110000      00000000000      0011


Q ss_pred             cccccCcCC--------ccccccccccCCCCchHHHHhhcCcceee
Q 019481          243 TFLSALKIT--------GCKSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       243 ~~~~~~~~p--------~~~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                      .....+.++        .++...|++.||.+|||++++++|||+.+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~  271 (284)
T cd06620         226 VQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ  271 (284)
T ss_pred             hhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence            111112111        12345789999999999999999998844

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=5e-33  Score=268.36  Aligned_cols=169  Identities=20%  Similarity=0.210  Sum_probs=135.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCcccccccccccc-------------------
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMN-------------------   65 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~-------------------   65 (340)
                      .||||.||+++++-+|+.||||.|....+.+....+.+|+..|++|+|||||++|..|...                   
T Consensus       489 kGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~~~~~sQ  568 (1351)
T KOG1035|consen  489 KGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVASDSESRSQ  568 (1351)
T ss_pred             CCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccccchhhhcc
Confidence            6999999999999999999999998765566667799999999999999999999988111                   


Q ss_pred             ----------------------------------cc------ccC-----------------------------------
Q 019481           66 ----------------------------------IC------LTG-----------------------------------   70 (340)
Q Consensus        66 ----------------------------------~~------~~~-----------------------------------   70 (340)
                                                        ++      .++                                   
T Consensus       569 s~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d~~~es  648 (1351)
T KOG1035|consen  569 SASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVILDDTSES  648 (1351)
T ss_pred             cCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccccCcchhh
Confidence                                              00      000                                   


Q ss_pred             ------------------CcceeeeeeccccCCCHHHHhcccCCCccccC-CHHHHHHHHHHHHHHHHHhhcCCCceecC
Q 019481           71 ------------------DRRYCWKNKWLMQKKGLENVHIGEHPASVRQL-RRAERLEIVTKMCQDLAFLHSSEKQVIYR  131 (340)
Q Consensus        71 ------------------~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l-~~~~~~~i~~qi~~~L~yLH~~~~~iiHr  131 (340)
                                        ...+.|+-||||+...|.++++++..     . ....++++++||++||.|+|+  +|||||
T Consensus       649 s~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~-----~~~~d~~wrLFreIlEGLaYIH~--~giIHR  721 (1351)
T KOG1035|consen  649 SESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHF-----NSQRDEAWRLFREILEGLAYIHD--QGIIHR  721 (1351)
T ss_pred             hhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhccc-----chhhHHHHHHHHHHHHHHHHHHh--Cceeec
Confidence                              00356788899998778888887664     2 467899999999999999999  779999


Q ss_pred             CCCCCcEEecCCCceEEeccccceeec-------------------ccCCcceeeccceeeccCcccc
Q 019481          132 DFKAPNILLDETFKCNLSDFSTAKVSA-------------------VENADLTALDTSSVSAQSGKTG  180 (340)
Q Consensus       132 DlKp~NILl~~~~~~kl~DFGla~~~~-------------------~~~~~~~~~gt~~~~~p~~~~~  180 (340)
                      ||||.||++|+++.|||+|||+|....                   .....+..+||..|+|||..-+
T Consensus       722 DLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~  789 (1351)
T KOG1035|consen  722 DLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSD  789 (1351)
T ss_pred             cCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcc
Confidence            999999999999999999999997621                   0112345689999999964443

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=2.1e-32  Score=237.95  Aligned_cols=240  Identities=15%  Similarity=0.132  Sum_probs=169.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||.+++..+++.+++|.++.. ......+.+.+|++++++++|+||++++++|.       +....++++||++
T Consensus        10 ~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-------~~~~~~~~~e~~~   82 (256)
T cd08221          10 KGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFM-------DDNTLLIEMEYAN   82 (256)
T ss_pred             ccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEe-------cCCeEEEEEEecC
Confidence            588999999999999999999998753 23445567889999999999999999999775       3347789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-C
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-A  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~  162 (340)
                      +|+|.+++.....   ..+++..+..++.|++.||.|||+  .+++||||||+||+++.++.+||+|||+++...... .
T Consensus        83 ~~~L~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~--~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~  157 (256)
T cd08221          83 GGTLYDKIVRQKG---QLFEEEMVLWYLFQIVSAVSYIHK--AGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSM  157 (256)
T ss_pred             CCcHHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHh--CCccccCCChHhEEEeCCCCEEECcCcceEEccccccc
Confidence            9999999987632   348999999999999999999999  779999999999999999999999999998765433 2


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      .....|++.|.+|+...+.... ..|+|+.|...+.+..+                     ..+|.......... ....
T Consensus       158 ~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g---------------------~~~~~~~~~~~~~~-~~~~  215 (256)
T cd08221         158 AETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTL---------------------KRTFDATNPLNLVV-KIVQ  215 (256)
T ss_pred             ccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHC---------------------CCCCCCCCHHHHHH-HHHc
Confidence            3345677888888643322211 12444444444333222                     22221100000000 0000


Q ss_pred             cccccc-CcCC---ccccccccccCCCCchHHHHhhcCcce
Q 019481          242 ITFLSA-LKIT---GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       242 ~~~~~~-~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ..+... +..+   ..+...|++.||.+||+++++++|||+
T Consensus       216 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         216 GNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             CCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence            000000 1111   123447899999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=5.3e-33  Score=254.79  Aligned_cols=163  Identities=20%  Similarity=0.137  Sum_probs=127.9

Q ss_pred             CCcceEEEEEEcCC-----CCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeee
Q 019481            5 APSFSVLIHVPFPD-----DRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         5 ~G~fg~V~~~~~~~-----~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      .|+||.||+|++..     +++.||+|+++........+.+.+|+++++.+ +||||++++++|..       ....+++
T Consensus        48 ~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~-------~~~~~lv  120 (374)
T cd05106          48 AGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTH-------GGPVLVI  120 (374)
T ss_pred             CCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecC-------CCCeEEe
Confidence            58899999998543     34579999997644444566788999999999 89999999997653       3367799


Q ss_pred             eccccCCCHHHHhcccCC--------------------------------------------------------------
Q 019481           79 KWLMQKKGLENVHIGEHP--------------------------------------------------------------   96 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~--------------------------------------------------------------   96 (340)
                      |||+++|+|.++++....                                                              
T Consensus       121 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (374)
T cd05106         121 TEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDE  200 (374)
T ss_pred             HhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccch
Confidence            999999999999865321                                                              


Q ss_pred             ---CccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCcc---eeeccc
Q 019481           97 ---ASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADL---TALDTS  170 (340)
Q Consensus        97 ---~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~---~~~gt~  170 (340)
                         .....+++..++.++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+++.........   +..++.
T Consensus       201 ~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~--~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~  278 (374)
T cd05106         201 EDTEDSWPLDLDDLLRFSSQVAQGMDFLAS--KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPV  278 (374)
T ss_pred             hccCCCCCcCHHHHHHHHHHHHHHHHHHHH--CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCcc
Confidence               001247889999999999999999999  889999999999999999999999999998764432111   112334


Q ss_pred             eeeccC
Q 019481          171 SVSAQS  176 (340)
Q Consensus       171 ~~~~p~  176 (340)
                      .|+||+
T Consensus       279 ~y~aPE  284 (374)
T cd05106         279 KWMAPE  284 (374)
T ss_pred             ceeCHH
Confidence            577774

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-33  Score=253.66  Aligned_cols=238  Identities=14%  Similarity=0.094  Sum_probs=170.3

Q ss_pred             CCCcceEEEEEEcCCCCc---e-EEEEEeec--cCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeee
Q 019481            4 SAPSFSVLIHVPFPDDRD---D-VMLKLHEL--ITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWK   77 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~---~-vAiK~~~~--~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~   77 (340)
                      ..|+||.||+|+.+..+.   . ||+|..+.  ........++.+|.++|++++|||||++||+       ..++.-.++
T Consensus       166 GeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGV-------a~~~~Pl~i  238 (474)
T KOG0194|consen  166 GEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGV-------AVLEEPLML  238 (474)
T ss_pred             ecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEE-------EcCCCccEE
Confidence            369999999999865422   3 89999874  3446677889999999999999999999993       334456779


Q ss_pred             eeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceee
Q 019481           78 NKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVS  157 (340)
Q Consensus        78 ~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~  157 (340)
                      +||+|+||+|.++|++.+.    .++..+...++.+.+.||+|||+  +++|||||-..|+|++.++.+||+|||+++.-
T Consensus       239 vmEl~~gGsL~~~L~k~~~----~v~~~ek~~~~~~AA~Gl~YLh~--k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~  312 (474)
T KOG0194|consen  239 VMELCNGGSLDDYLKKNKK----SLPTLEKLRFCYDAARGLEYLHS--KNCIHRDIAARNCLYSKKGVVKISDFGLSRAG  312 (474)
T ss_pred             EEEecCCCcHHHHHHhCCC----CCCHHHHHHHHHHHHhHHHHHHH--CCCcchhHhHHHheecCCCeEEeCccccccCC
Confidence            9999999999999999874    39999999999999999999999  88999999999999999999999999998764


Q ss_pred             cccCCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccC-CchhHHHHHHHHHHH
Q 019481          158 AVENADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKT-ENETWNNFLYLLLIA  236 (340)
Q Consensus       158 ~~~~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~  236 (340)
                      ..-...     ...-..|..+.+||.+...       .+...++.  |+     .|++..|+-+ |..||+......+..
T Consensus       313 ~~~~~~-----~~~~klPirWLAPEtl~~~-------~~s~kTDV--~s-----fGV~~~Eif~~g~~Py~g~~~~~v~~  373 (474)
T KOG0194|consen  313 SQYVMK-----KFLKKLPIRWLAPETLNTG-------IFSFKTDV--WS-----FGVLLWEIFENGAEPYPGMKNYEVKA  373 (474)
T ss_pred             cceeec-----cccccCcceecChhhhccC-------ccccccch--hh-----eeeeEEeeeccCCCCCCCCCHHHHHH
Confidence            311111     1011345556666665322       22233333  66     6666666665 555666644432222


Q ss_pred             Hhhhhcccccc--CcCCcc---ccccccccCCCCchHHHHhhc
Q 019481          237 TLLSTITFLSA--LKITGC---KSEEGYKNNSSLNPICQIVNQ  274 (340)
Q Consensus       237 ~~~~~~~~~~~--~~~p~~---~~~~~l~~dP~~R~t~~~ll~  274 (340)
                       .+....+...  +..|..   ....|+.+||+.||+..++.+
T Consensus       374 -kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  374 -KIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             -HHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence             2112122222  222222   244899999999999886643

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.7e-33  Score=241.80  Aligned_cols=239  Identities=18%  Similarity=0.121  Sum_probs=169.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      +.|+||.||+|.+..+++.+|+|++..... ...+.+.+|++++++++||||+++++++.       +....++++||++
T Consensus        12 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-------~~~~~~l~~e~~~   83 (262)
T cd06613          12 GSGTYGDVYKARDIATGELVAIKVIKLEPG-DDFEIIQQEISMLKECRHPNIVAYFGSYL-------RRDKLWIVMEYCG   83 (262)
T ss_pred             cCCCceEEEEeEecCCCCEEEEEEEEcCch-hhHHHHHHHHHHHHhCCCCChhceEEEEE-------eCCEEEEEEeCCC
Confidence            478999999999999999999999975432 25577899999999999999999999664       3447889999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-C
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-A  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~  162 (340)
                      +++|.+++.....    .+++..+..++.|++.||+|||+  ++|+|+||||+||+++.++.+||+|||++....... .
T Consensus        84 ~~~l~~~~~~~~~----~l~~~~~~~~~~ql~~~l~~lh~--~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~  157 (262)
T cd06613          84 GGSLQDIYQVTRG----PLSELQIAYVCRETLKGLAYLHE--TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAK  157 (262)
T ss_pred             CCcHHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHh--CCceecCCChhhEEECCCCCEEECccccchhhhhhhhc
Confidence            9999999987632    39999999999999999999999  889999999999999999999999999997665432 2


Q ss_pred             cceeeccceeeccCccccc---hh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHH-
Q 019481          163 DLTALDTSSVSAQSGKTGM---EM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIAT-  237 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~---~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-  237 (340)
                      .....++..|++|+.+.+.   .. ...|+|+.|...+.+.++.                     .+|........... 
T Consensus       158 ~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~---------------------~p~~~~~~~~~~~~~  216 (262)
T cd06613         158 RKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQ---------------------PPMFDLHPMRALFLI  216 (262)
T ss_pred             cccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCC---------------------CCCCCCCHHHHHHHH
Confidence            3345677778888654322   11 1235555444444443332                     22211100000000 


Q ss_pred             -hh--hhccccccCcCC---ccccccccccCCCCchHHHHhhcCcc
Q 019481          238 -LL--STITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPF  277 (340)
Q Consensus       238 -~~--~~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~  277 (340)
                       ..  ........+..+   ..+-..|++.||.+|||+++++.|||
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         217 SKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             HhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence             00  000000001111   23345789999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=3.2e-33  Score=247.90  Aligned_cols=184  Identities=16%  Similarity=0.077  Sum_probs=140.6

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|+++.+++.||+|.+...........+.+|++++++++||||+++++++.       +..+.++++||++
T Consensus        14 g~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~~~   86 (291)
T cd07844          14 GEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIH-------TKKTLTLVFEYLD   86 (291)
T ss_pred             eecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEe-------cCCeEEEEEecCC
Confidence            358999999999999999999999975433333345678999999999999999999665       3447789999997


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-C
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-A  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~  162 (340)
                       ++|.+++.....    .+++..++.++.|+++||.|||+  .+|+||||||+||+++.++.+||+|||+++...... .
T Consensus        87 -~~L~~~~~~~~~----~~~~~~~~~~~~ql~~al~~lH~--~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~  159 (291)
T cd07844          87 -TDLKQYMDDCGG----GLSMHNVRLFLFQLLRGLAYCHQ--RRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKT  159 (291)
T ss_pred             -CCHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHh--CCeecccCCHHHEEEcCCCCEEECccccccccCCCCcc
Confidence             499999876543    38999999999999999999999  789999999999999999999999999987543221 1


Q ss_pred             cceeeccceeeccCccccchh--hhhHhHhCCccccccccc
Q 019481          163 DLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEK  201 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~  201 (340)
                      .....++..|++|+.+.+...  ...|+|+.|...+.+..+
T Consensus       160 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g  200 (291)
T cd07844         160 YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATG  200 (291)
T ss_pred             ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhC
Confidence            122345666777764432111  123566655555554433

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=7.5e-33  Score=246.32  Aligned_cols=184  Identities=18%  Similarity=0.118  Sum_probs=144.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc----hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP----LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      ..|+||.||+|.+..+++.||+|.+.....    ......+.+|++++++++|+||+++++++..       ..+.++++
T Consensus         9 g~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-------~~~~~lv~   81 (298)
T cd07841           9 GEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH-------KSNINLVF   81 (298)
T ss_pred             eeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec-------CCEEEEEE
Confidence            368899999999999999999999975322    1234556789999999999999999997653       44788999


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      ||+ +|+|.+++.....    .+++..+..++.||++||+|||+  ++|+||||||+||+++.++.+||+|||+++....
T Consensus        82 e~~-~~~L~~~i~~~~~----~~~~~~~~~~~~qi~~al~~lH~--~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~  154 (298)
T cd07841          82 EFM-ETDLEKVIKDKSI----VLTPADIKSYMLMTLRGLEYLHS--NWILHRDLKPNNLLIASDGVLKLADFGLARSFGS  154 (298)
T ss_pred             ccc-CCCHHHHHhccCC----CCCHHHHHHHHHHHHHHHHHHHh--CCeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence            999 8999999987652    39999999999999999999999  7899999999999999999999999999987655


Q ss_pred             cC-CcceeeccceeeccCccccch--hhhhHhHhCCccccccccc
Q 019481          160 EN-ADLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEK  201 (340)
Q Consensus       160 ~~-~~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~  201 (340)
                      .. ......++..|++|+.+.+..  -...|+|+.|...+.+.++
T Consensus       155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g  199 (298)
T cd07841         155 PNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLR  199 (298)
T ss_pred             CCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcC
Confidence            32 222334567788886443211  1234666666655554443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.7e-33  Score=242.97  Aligned_cols=244  Identities=18%  Similarity=0.174  Sum_probs=169.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|.+..+++.+|+|++....  ...+.+.+|+++++++ +||||++++++|...... .+....++++||+
T Consensus        15 ~~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~-~~~~~~~lv~e~~   91 (275)
T cd06608          15 GEGTYGKVYKARHKKTGQLVAIKIMDIIE--DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPP-GNDDQLWLVMELC   91 (275)
T ss_pred             cCCCCeEEEEEEECCCCcEEEEEEEecCc--hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCC-CcceEEEEEEEcC
Confidence            36889999999999999999999987532  2346789999999999 699999999988654321 2345688999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-  161 (340)
                      ++++|.+++..... .+..+++..+..++.|++.||+|||+  .+++|+||+|+||+++.++.+||+|||++....... 
T Consensus        92 ~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~ql~~al~~lH~--~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~  168 (275)
T cd06608          92 GGGSVTDLVKGLRK-KGKRLKEEWIAYILRETLRGLAYLHE--NKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLG  168 (275)
T ss_pred             CCCcHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHhc--CCcccCCCCHHHEEEccCCeEEECCCccceecccchh
Confidence            99999999876430 01348999999999999999999999  789999999999999999999999999997654422 


Q ss_pred             CcceeeccceeeccCccccchh------hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHH
Q 019481          162 ADLTALDTSSVSAQSGKTGMEM------KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLI  235 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~------~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (340)
                      ......|+..|+||+.+.+.+.      ...|+|+.|...+                     ++.++..||.........
T Consensus       169 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~---------------------~l~~g~~p~~~~~~~~~~  227 (275)
T cd06608         169 RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAI---------------------ELADGKPPLCDMHPMRAL  227 (275)
T ss_pred             hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHH---------------------HHHhCCCCccccchHHHH
Confidence            2234457777888853322110      0124444443333                     333333333221111000


Q ss_pred             HHhhhhccccccCcC--C-------ccccccccccCCCCchHHHHhhcCcce
Q 019481          236 ATLLSTITFLSALKI--T-------GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       236 ~~~~~~~~~~~~~~~--p-------~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ...    .....+..  +       .++...||..||++|||++++++|||+
T Consensus       228 ~~~----~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         228 FKI----PRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             HHh----hccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence            000    00000000  1       133457899999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=1.8e-33  Score=250.26  Aligned_cols=239  Identities=18%  Similarity=0.139  Sum_probs=167.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|.+..+++.||+|.++... ....+.+.+|+.+++.++||||+++++.|..       .+..++++||++
T Consensus        30 g~g~~g~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-------~~~~~iv~e~~~  101 (297)
T cd06659          30 GEGSTGIVCIAREKHSGRQVAVKMMDLRK-QQRRELLFNEVVIMRDYQHQNVVEMYKSYLV-------GEELWVLMEFLQ  101 (297)
T ss_pred             CCCCceeEEEEEEcCCCCEEEEEEEEecc-cchHHHHHHHHHHHHhCCCCchhhhhhheee-------CCeEEEEEecCC
Confidence            46889999999999899999999997533 2334668899999999999999999997653       346789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-C
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-A  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~  162 (340)
                      +++|.+++... .     +++..+..++.|++.||+|||+  ++++||||||+||+++.++.+||+|||++....... .
T Consensus       102 ~~~L~~~~~~~-~-----~~~~~~~~~~~qi~~~L~~LH~--~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~  173 (297)
T cd06659         102 GGALTDIVSQT-R-----LNEEQIATVCESVLQALCYLHS--QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK  173 (297)
T ss_pred             CCCHHHHHhhc-C-----CCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHeEEccCCcEEEeechhHhhccccccc
Confidence            99999987652 2     8999999999999999999999  789999999999999999999999999997654432 2


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHh--h
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATL--L  239 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~  239 (340)
                      .....|+..|++|+...+.+.. ..|+|+.|...+.+..                     |..+|............  .
T Consensus       174 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~---------------------g~~p~~~~~~~~~~~~~~~~  232 (297)
T cd06659         174 RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVD---------------------GEPPYFSDSPVQAMKRLRDS  232 (297)
T ss_pred             ccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHh---------------------CCCCCCCCCHHHHHHHHhcc
Confidence            3345677888888543322211 1244444433333322                     22222110000000000  0


Q ss_pred             hhccccccCcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          240 STITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       240 ~~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ...........+   .++...|++.||.+||+++++++|||+.
T Consensus       233 ~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~  275 (297)
T cd06659         233 PPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLL  275 (297)
T ss_pred             CCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhc
Confidence            000000111111   1234478999999999999999999994

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=2.5e-33  Score=246.08  Aligned_cols=160  Identities=18%  Similarity=0.185  Sum_probs=130.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc---------hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcce
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP---------LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRY   74 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~---------~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~   74 (340)
                      ..|+||.||+|.+..+++.+|+|.++....         ....+.+.+|++++++++||||+++++++.       +...
T Consensus        10 g~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~   82 (272)
T cd06629          10 GKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFET-------TEEY   82 (272)
T ss_pred             cccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEec-------cCCc
Confidence            468899999999998999999998863111         112346788999999999999999999654       3346


Q ss_pred             eeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccc
Q 019481           75 CWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTA  154 (340)
Q Consensus        75 ~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla  154 (340)
                      .++++||+++|+|.++++..+.     +++..+..++.||+.||.|||+  ++++||||||+||+++.++.+||+|||++
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~-----l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~~~nil~~~~~~~~l~d~~~~  155 (272)
T cd06629          83 LSIFLEYVPGGSIGSCLRTYGR-----FEEQLVRFFTEQVLEGLAYLHS--KGILHRDLKADNLLVDADGICKISDFGIS  155 (272)
T ss_pred             eEEEEecCCCCcHHHHHhhccC-----CCHHHHHHHHHHHHHHHHHHhh--CCeeecCCChhhEEEcCCCeEEEeecccc
Confidence            7799999999999999988765     9999999999999999999999  88999999999999999999999999999


Q ss_pred             eeecccC---CcceeeccceeeccCc
Q 019481          155 KVSAVEN---ADLTALDTSSVSAQSG  177 (340)
Q Consensus       155 ~~~~~~~---~~~~~~gt~~~~~p~~  177 (340)
                      +......   ......|+..|++|+.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~y~~PE~  181 (272)
T cd06629         156 KKSDDIYDNDQNMSMQGSVFWMAPEV  181 (272)
T ss_pred             ccccccccccccccccCCccccCHHH
Confidence            7654321   1223346666777753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-32  Score=249.52  Aligned_cols=173  Identities=19%  Similarity=0.197  Sum_probs=141.1

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .+|.||+||+|.+-.   .||||+++... ..+..+.|++|+.++++-+|.||+-+.||+...       .+ .++..+|
T Consensus       401 GsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p-------~~-AIiTqwC  469 (678)
T KOG0193|consen  401 GSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP-------PL-AIITQWC  469 (678)
T ss_pred             ccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC-------ce-eeeehhc
Confidence            479999999999743   39999999743 334678899999999999999999999977532       23 6889999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec---c
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA---V  159 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~---~  159 (340)
                      +|.||+.+++....    .|+..+.+.|++||++|+.|||.  ++|||||||..||++.++++|||+|||++..-.   .
T Consensus       470 eGsSLY~hlHv~et----kfdm~~~idIAqQiaqGM~YLHA--K~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g  543 (678)
T KOG0193|consen  470 EGSSLYTHLHVQET----KFDMNTTIDIAQQIAQGMDYLHA--KNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSG  543 (678)
T ss_pred             cCchhhhhccchhh----hhhHHHHHHHHHHHHHhhhhhhh--hhhhhhhccccceEEccCCcEEEecccceeeeeeecc
Confidence            99999999998765    49999999999999999999999  999999999999999999999999999986432   2


Q ss_pred             cCCcceeeccceeeccC--------------ccccchhhhhHhHhCCc
Q 019481          160 ENADLTALDTSSVSAQS--------------GKTGMEMKMAQLESGGW  193 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~--------------~~~~~~~~~~~~~s~g~  193 (340)
                      +.....-.|...|||||              |++++|++++|+.++.+
T Consensus       544 ~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~l  591 (678)
T KOG0193|consen  544 EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGEL  591 (678)
T ss_pred             ccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcC
Confidence            23333445777788884              55566666666666433

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=4.6e-32  Score=243.11  Aligned_cols=160  Identities=16%  Similarity=0.095  Sum_probs=129.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|++|.||.++...+++.||+|+++.. ......+.+.+|++++++++||||++++++|.       +....++++||++
T Consensus        10 ~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~-------~~~~~~~~~e~~~   82 (314)
T cd08216          10 FEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFI-------VDSELYVVSPLMA   82 (314)
T ss_pred             hcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheee-------cCCeEEEEEeccC
Confidence            355677777777779999999999764 34455677999999999999999999999765       3446789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC-
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA-  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~-  162 (340)
                      +|+|.+++.....   ..+++..+..++.|+++||+|||+  ++|+||||||+||+++.++.+||+|||.+........ 
T Consensus        83 ~~~l~~~l~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~--~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~  157 (314)
T cd08216          83 YGSCEDLLKTHFP---EGLPELAIAFILKDVLNALDYIHS--KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKR  157 (314)
T ss_pred             CCCHHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCcceEEEecCCceEEecCccceeecccccc
Confidence            9999999986543   348999999999999999999999  7899999999999999999999999999876543211 


Q ss_pred             -------cceeeccceeeccC
Q 019481          163 -------DLTALDTSSVSAQS  176 (340)
Q Consensus       163 -------~~~~~gt~~~~~p~  176 (340)
                             .....++..|++|+
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE  178 (314)
T cd08216         158 QRVVHDFPKSSVKNLPWLSPE  178 (314)
T ss_pred             ccccccccccccccccccCHH
Confidence                   12234555677774

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=1e-32  Score=242.91  Aligned_cols=237  Identities=20%  Similarity=0.186  Sum_probs=168.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .+|+||.||+|.+..+++.||+|+..........+.+.+|+.++++++||||++++++|.       +..+.++++||++
T Consensus        13 g~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-------~~~~~~lv~e~~~   85 (277)
T cd06641          13 GKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-------KDTKLWIIMEYLG   85 (277)
T ss_pred             eecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEE-------eCCeEEEEEEeCC
Confidence            358999999999988999999999875444445567889999999999999999999664       3346789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC-
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA-  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~-  162 (340)
                      +++|.+++... .     +++..+..++.|++.|+.|||+  ++++|+||||+||+++.++.++|+|||+++.+..... 
T Consensus        86 ~~~l~~~i~~~-~-----~~~~~~~~~~~~l~~~l~~lh~--~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~  157 (277)
T cd06641          86 GGSALDLLEPG-P-----LDETQIATILREILKGLDYLHS--EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK  157 (277)
T ss_pred             CCcHHHHHhcC-C-----CCHHHHHHHHHHHHHHHHHHcc--CCeecCCCCHHhEEECCCCCEEEeecccceecccchhh
Confidence            99999998753 2     8999999999999999999999  8899999999999999999999999999987654321 


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      .....|+..|++|+...+.+.. ..|+|+.|...+.                     +.+|..++..........    .
T Consensus       158 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~---------------------l~~g~~p~~~~~~~~~~~----~  212 (277)
T cd06641         158 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE---------------------LAKGEPPHSELHPMKVLF----L  212 (277)
T ss_pred             hccccCCccccChhhhccCCCCchhhHHHHHHHHHH---------------------HHcCCCCCCccchHHHHH----H
Confidence            2234566777777533221111 1244444433333                     333333332211110000    0


Q ss_pred             ccccccCcCCc-------cccccccccCCCCchHHHHhhcCcceee
Q 019481          242 ITFLSALKITG-------CKSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       242 ~~~~~~~~~p~-------~~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                      +.....+..+.       ++...|++.||.+||+++++++|||+.+
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~  258 (277)
T cd06641         213 IPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVR  258 (277)
T ss_pred             HhcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhh
Confidence            00111111111       2234689999999999999999999943

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=4.2e-33  Score=247.83  Aligned_cols=239  Identities=18%  Similarity=0.120  Sum_probs=166.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|++..+++.||+|.+..... ...+.+.+|+.+++.++||||+++++.|..       ....++++||++
T Consensus        29 g~g~~~~v~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~-------~~~~~lv~e~~~  100 (296)
T cd06654          29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSYLV-------GDELWVVMEYLA  100 (296)
T ss_pred             cCCCCeEEEEEEECCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhCCCCCEeeEEEEEEe-------CCEEEEeecccC
Confidence            468899999999999999999999975332 234668899999999999999999997653       336789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC-
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA-  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~-  162 (340)
                      +++|.+++... .     +++.++..++.|++.||.|||+  .+|+||||||+||+++.++.+||+|||+++....... 
T Consensus       101 ~~~L~~~~~~~-~-----~~~~~~~~i~~ql~~aL~~LH~--~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~  172 (296)
T cd06654         101 GGSLTDVVTET-C-----MDEGQIAAVCRECLQALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK  172 (296)
T ss_pred             CCCHHHHHHhc-C-----CCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEEcCCCCEEECccccchhccccccc
Confidence            99999998653 2     7899999999999999999999  8899999999999999999999999999876544322 


Q ss_pred             cceeeccceeeccCccccchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      .....|++.|++|+...+... ...|+|+.|...+.+.++.  .||......             ....     ......
T Consensus       173 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~--~pf~~~~~~-------------~~~~-----~~~~~~  232 (296)
T cd06654         173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPL-------------RALY-----LIATNG  232 (296)
T ss_pred             cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCC--CCCCCCCHH-------------HhHH-----HHhcCC
Confidence            233467788888863322111 1234444444443333222  121111000             0000     000000


Q ss_pred             c-cccccCcCC---ccccccccccCCCCchHHHHhhcCcce
Q 019481          242 I-TFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       242 ~-~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      . .......++   .++...|++.||.+|||++++++|||+
T Consensus       233 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~  273 (296)
T cd06654         233 TPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFL  273 (296)
T ss_pred             CCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhh
Confidence            0 000001111   223447899999999999999999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-32  Score=239.97  Aligned_cols=237  Identities=16%  Similarity=0.183  Sum_probs=167.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc----CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI----TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|+||.||+|++..+++.||+|.+...    ...+....+.+|++++++++||||+++++.+.+     .+....++++|
T Consensus        12 ~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~-----~~~~~~~~v~e   86 (264)
T cd06653          12 RGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRD-----PEEKKLSIFVE   86 (264)
T ss_pred             cCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEc-----CCCCEEEEEEE
Confidence            588999999999999999999997532    122345678899999999999999999996542     23346778999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      |+++++|.+++.....     +++..+..++.|++.||.|||+  ++++||||||+||+++.++.++|+|||+++.....
T Consensus        87 ~~~~~~L~~~~~~~~~-----l~~~~~~~~~~~i~~al~~LH~--~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~  159 (264)
T cd06653          87 YMPGGSIKDQLKAYGA-----LTENVTRRYTRQILQGVSYLHS--NMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTI  159 (264)
T ss_pred             eCCCCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHEEEcCCCCEEECccccccccccc
Confidence            9999999999987655     8999999999999999999999  77999999999999999999999999999865431


Q ss_pred             ----CCcceeeccceeeccCccccchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHH
Q 019481          161 ----NADLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLI  235 (340)
Q Consensus       161 ----~~~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (340)
                          .......|+..|++|+...+... ...|+                |+     .|++..++.+|..||.........
T Consensus       160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di----------------~s-----lG~il~~l~~g~~p~~~~~~~~~~  218 (264)
T cd06653         160 CMSGTGIKSVTGTPYWMSPEVISGEGYGRKADV----------------WS-----VACTVVEMLTEKPPWAEYEAMAAI  218 (264)
T ss_pred             cccCccccccCCcccccCHhhhcCCCCCccccH----------------HH-----HHHHHHHHHhCCCCCCccCHHHHH
Confidence                11123456777777753322111 01233                33     444444444444444332221111


Q ss_pred             HHhhhhccccccCcCCccccc-------cccccCCCCchHHHHhhcCcce
Q 019481          236 ATLLSTITFLSALKITGCKSE-------EGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       236 ~~~~~~~~~~~~~~~p~~~~~-------~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .   ........+.+|..+++       .|++ +|.+||++++++.|||+
T Consensus       219 ~---~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         219 F---KIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             H---HHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence            1   11111122344444433       5677 48999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=2.7e-32  Score=237.32  Aligned_cols=238  Identities=16%  Similarity=0.159  Sum_probs=166.9

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||++++..+++.||+|.+... ......+.+.+|++++++++||||++++++|.       +....++++||+
T Consensus         9 g~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-------~~~~~~lv~e~~   81 (256)
T cd08218           9 GEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFE-------ENGNLYIVMDYC   81 (256)
T ss_pred             ccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeec-------CCCeEEEEEecC
Confidence            3689999999999999999999998752 23344567899999999999999999999765       344788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      ++++|.+.+.....   ..+++..+..++.|++.||.|||+  ++++|+||+|+||+++.++.++|+|||++........
T Consensus        82 ~~~~l~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~--~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~  156 (256)
T cd08218          82 EGGDLYKKINAQRG---VLFPEDQILDWFVQICLALKHVHD--RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE  156 (256)
T ss_pred             CCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence            99999999976543   248999999999999999999999  7799999999999999999999999999987654322


Q ss_pred             -cceeeccceeeccCccccchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          163 -DLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       163 -~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                       .....|+..|++|+...+... ...|+|+.|...+.                     +.++..++.......    ...
T Consensus       157 ~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~---------------------l~~g~~~~~~~~~~~----~~~  211 (256)
T cd08218         157 LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYE---------------------MCTLKHAFEAGNMKN----LVL  211 (256)
T ss_pred             hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHH---------------------HHcCCCCccCCCHHH----HHH
Confidence             223346666777753222111 11233333333332                     322222221110000    000


Q ss_pred             hccccccCcCCcc-------ccccccccCCCCchHHHHhhcCcce
Q 019481          241 TITFLSALKITGC-------KSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~~~~~p~~-------~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .+..+..+..|..       +...|++.||++||++.++++|||+
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         212 KIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             HHhcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence            0001111222222       2336799999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=5.6e-33  Score=250.57  Aligned_cols=142  Identities=16%  Similarity=0.161  Sum_probs=122.9

Q ss_pred             CCCCCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            2 GGSAPSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         2 ~~~~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      |...|+||+||+|++..+++.||+|++.... .....+.+.+|+.+++.++||||++++++|..       ..+.++++|
T Consensus         7 g~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~-------~~~~~~v~e   79 (328)
T cd08226           7 GRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTT-------GSWLWVISP   79 (328)
T ss_pred             CCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEec-------CCceEEEEe
Confidence            4446799999999999999999999987532 33445778899999999999999999997753       346789999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccce
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK  155 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~  155 (340)
                      |+.+|+|.+++.+...   ..+++..+..++.|++.||+|||+  ++|+||||||+|||++.++.+|++||+.+.
T Consensus        80 ~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~lH~--~~ivHrDlkp~Nill~~~~~~~~~~~~~~~  149 (328)
T cd08226          80 FMAYGSANSLLKTYFP---EGMSEALIGNILFGALRGLNYLHQ--NGYIHRNIKASHILISGDGLVSLSGLSHLY  149 (328)
T ss_pred             cccCCCHHHHHHhhcc---cCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEeCCCcEEEechHHHh
Confidence            9999999999987643   348999999999999999999999  779999999999999999999999998654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=7.6e-32  Score=238.40  Aligned_cols=167  Identities=19%  Similarity=0.192  Sum_probs=133.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|++..+++.+|+|+++..  ......+.+|+.+++++ +||||+++++++....  ..+....++++||+
T Consensus        27 g~g~~~~vy~~~~~~~~~~~~ik~~~~~--~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~--~~~~~~~~lv~e~~  102 (286)
T cd06638          27 GKGTYGKVFKVLNKKNGSKAAVKILDPI--HDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD--VKNGDQLWLVLELC  102 (286)
T ss_pred             ccCCCcEEEEEEECCCCceeEEEeeccc--cchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc--cCCCCeEEEEEeec
Confidence            3688999999999999999999998642  22345678899999999 6999999999764221  12445788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-  161 (340)
                      ++|+|.+++...... ...+++..+..++.|+++||.|||+  ++|+||||||+||+++.++.+||+|||+++.+.... 
T Consensus       103 ~~~~L~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~  179 (286)
T cd06638         103 NGGSVTDLVKGFLKR-GERMEEPIIAYILHEALMGLQHLHV--NKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL  179 (286)
T ss_pred             CCCCHHHHHHHhhcc-CccccHHHHHHHHHHHHHHHHHHHh--CCccccCCCHHhEEECCCCCEEEccCCceeecccCCC
Confidence            999999987642110 1348999999999999999999999  789999999999999999999999999998765432 


Q ss_pred             CcceeeccceeeccCc
Q 019481          162 ADLTALDTSSVSAQSG  177 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~  177 (340)
                      ......|+..|++|+.
T Consensus       180 ~~~~~~~~~~y~aPE~  195 (286)
T cd06638         180 RRNTSVGTPFWMAPEV  195 (286)
T ss_pred             ccccccCCCcccChhh
Confidence            2234467787888854

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.7e-33  Score=244.26  Aligned_cols=238  Identities=15%  Similarity=0.085  Sum_probs=161.9

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc--hhhHHHHHHHHHHh-hhcCCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP--LQLRRDDDGKLDSL-EEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~~E~~~l-~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.||+|++..+++.||+|++.+...  ......+..|..++ ...+||||++++++|.       +....++++|
T Consensus         5 ~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-------~~~~~~lv~e   77 (260)
T cd05611           5 SKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQ-------SKDYLYLVME   77 (260)
T ss_pred             CcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEE-------cCCeEEEEEe
Confidence            468899999999999999999999874221  12223445555544 4558999999999765       3347789999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      |+++++|.+++.....     +++..+..++.|+++||.|||+  .+++||||+|+||+++.++.+||+|||+++.... 
T Consensus        78 ~~~~~~L~~~l~~~~~-----~~~~~~~~i~~qi~~aL~~lH~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-  149 (260)
T cd05611          78 YLNGGDCASLIKTLGG-----LPEDWAKQYIAEVVLGVEDLHQ--RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-  149 (260)
T ss_pred             ccCCCCHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHeEECCCCcEEEeecccceeccc-
Confidence            9999999999987655     8999999999999999999999  7899999999999999999999999999876543 


Q ss_pred             CCcceeeccceeeccCccccch-hhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          161 NADLTALDTSSVSAQSGKTGME-MKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~-~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                        .....|+..|++|+...+.. -...|+|+.|...+.+.++.  .|+......              ....    ....
T Consensus       150 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~--~p~~~~~~~--------------~~~~----~~~~  207 (260)
T cd05611         150 --NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGY--PPFHAETPD--------------AVFD----NILS  207 (260)
T ss_pred             --cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCC--CCCCCCCHH--------------HHHH----HHHh
Confidence              22345677788775433221 11234444444444433322  232211110              0000    0011


Q ss_pred             hhcccccc--CcCC---ccccccccccCCCCchHH---HHhhcCcce
Q 019481          240 STITFLSA--LKIT---GCKSEEGYKNNSSLNPIC---QIVNQHPFY  278 (340)
Q Consensus       240 ~~~~~~~~--~~~p---~~~~~~~l~~dP~~R~t~---~~ll~hp~~  278 (340)
                      ....+...  +..+   .++..+|++.||++||++   +++++|||+
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~  254 (260)
T cd05611         208 RRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFF  254 (260)
T ss_pred             cccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHh
Confidence            11111111  1122   223457899999999965   799999999

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=2.5e-32  Score=241.39  Aligned_cols=184  Identities=15%  Similarity=0.159  Sum_probs=144.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc-hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP-LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      +.|+||.||+|.+..+++.||+|.+..... ....+.+.+|+++++.++||||++++++|.       +....++++||+
T Consensus        10 g~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~~   82 (286)
T cd07846          10 GEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFR-------RKKRLYLVFEFV   82 (286)
T ss_pred             ccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcc-------cCCeEEEEEecC
Confidence            468999999999999999999999865322 223566889999999999999999999764       445788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      ++++|.++......     +++..+..++.||++||+|||+  ++++||||||+||++++++.+||+|||++........
T Consensus        83 ~~~~l~~~~~~~~~-----~~~~~~~~~~~~i~~~l~~LH~--~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~  155 (286)
T cd07846          83 DHTVLDDLEKYPNG-----LDESRVRKYLFQILRGIEFCHS--HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE  155 (286)
T ss_pred             CccHHHHHHhccCC-----CCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc
Confidence            99999888776544     8999999999999999999999  8899999999999999999999999999987654332


Q ss_pred             -cceeeccceeeccCccccchh--hhhHhHhCCccccccccc
Q 019481          163 -DLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEK  201 (340)
Q Consensus       163 -~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~  201 (340)
                       .....++..|++|+...+...  ...|+|+.|...+.+.++
T Consensus       156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g  197 (286)
T cd07846         156 VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTG  197 (286)
T ss_pred             ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcC
Confidence             223457777888864432111  124666655555555443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=7.8e-32  Score=234.68  Aligned_cols=164  Identities=17%  Similarity=0.181  Sum_probs=135.4

Q ss_pred             CCCcceEEEEEEcCCC---CceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDD---RDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~---~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.||+|.+...   +..||+|++.........+.+.+|+++++.++|+||+++++++..       ....++++|
T Consensus         4 g~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-------~~~~~lv~e   76 (262)
T cd00192           4 GEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTE-------EEPLYLVLE   76 (262)
T ss_pred             ccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecC-------CCceEEEEE
Confidence            4689999999999866   889999999864443456788999999999999999999997653       446789999


Q ss_pred             cccCCCHHHHhcccCCC----ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481           81 LMQKKGLENVHIGEHPA----SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~----~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      |+++++|.+++......    ....+++..+..++.|+++||+|||+  ++++||||||+||+++.++.+||+|||.++.
T Consensus        77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~--~~i~H~di~p~nili~~~~~~~l~dfg~~~~  154 (262)
T cd00192          77 YMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS--KKFVHRDLAARNCLVGEDLVVKISDFGLSRD  154 (262)
T ss_pred             eccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc--CCcccCccCcceEEECCCCcEEEcccccccc
Confidence            99999999999886210    00239999999999999999999999  8899999999999999999999999999987


Q ss_pred             ecccC---CcceeeccceeeccC
Q 019481          157 SAVEN---ADLTALDTSSVSAQS  176 (340)
Q Consensus       157 ~~~~~---~~~~~~gt~~~~~p~  176 (340)
                      .....   ......++..|++|+
T Consensus       155 ~~~~~~~~~~~~~~~~~~y~aPE  177 (262)
T cd00192         155 VYDDDYYRKKTGGKLPIRWMAPE  177 (262)
T ss_pred             cccccccccccCCCcCccccCHH
Confidence            75532   223344567777775

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=1.6e-32  Score=242.03  Aligned_cols=180  Identities=13%  Similarity=0.142  Sum_probs=137.2

Q ss_pred             CCCcceEEEEEEcCCCCc----eEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            4 SAPSFSVLIHVPFPDDRD----DVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~----~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      ..|+||+||+|++..+++    .||+|+++........+.+.+|+.+++.++||||+++++++...        ..++++
T Consensus        16 g~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--------~~~l~~   87 (279)
T cd05109          16 GSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS--------TVQLVT   87 (279)
T ss_pred             CCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC--------CcEEEE
Confidence            368999999999766665    48999987655555567789999999999999999999865421        455889


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      ||+++|+|.++++....    .+++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++....
T Consensus        88 ~~~~~g~l~~~l~~~~~----~~~~~~~~~~~~qi~~~L~~lH~--~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~  161 (279)
T cd05109          88 QLMPYGCLLDYVRENKD----RIGSQDLLNWCVQIAKGMSYLEE--VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI  161 (279)
T ss_pred             EcCCCCCHHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHH--CCeeccccccceEEEcCCCcEEECCCCceeeccc
Confidence            99999999999987543    38999999999999999999999  8899999999999999999999999999987754


Q ss_pred             cCCcce---eeccceeeccCccccchhh-hhHhHhCCccccc
Q 019481          160 ENADLT---ALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHD  197 (340)
Q Consensus       160 ~~~~~~---~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~  197 (340)
                      ......   ..++..|++|+...+.++. ..|+|+.|...++
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~e  203 (279)
T cd05109         162 DETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWE  203 (279)
T ss_pred             ccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHH
Confidence            332211   1234457777543222111 2355555544444

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.98  E-value=1.2e-32  Score=239.42  Aligned_cols=241  Identities=15%  Similarity=0.159  Sum_probs=166.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|.+..+++.+|+|.+.... .....+.+.+|++++++++|+||+++++.+.       +....++++||++
T Consensus        10 ~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~-------~~~~~~lv~e~~~   82 (257)
T cd08225          10 EGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQ-------ENGRLFIVMEYCD   82 (257)
T ss_pred             CCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheec-------cCCeEEEEEecCC
Confidence            6899999999999999999999997521 1234566789999999999999999999664       3447889999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC-ceEEeccccceeecccCC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF-KCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~-~~kl~DFGla~~~~~~~~  162 (340)
                      +++|.+++.....   ..+++..+..++.|+++||.|||+  .+++|+||||+||++++++ .+||+|||.+........
T Consensus        83 ~~~L~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~--~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~  157 (257)
T cd08225          83 GGDLMKRINRQRG---VLFSEDQILSWFVQISLGLKHIHD--RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME  157 (257)
T ss_pred             CCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHH--CCcccccCCHHHEEEcCCCCeEEecccccchhccCCcc
Confidence            9999999986543   348999999999999999999999  7799999999999999876 469999999987654322


Q ss_pred             -cceeeccceeeccCccccchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          163 -DLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       163 -~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                       .....|+..|++|+...+... ...|+|+.|...+.+..+.  .|+.....                 ...  ....+.
T Consensus       158 ~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~--~p~~~~~~-----------------~~~--~~~~~~  216 (257)
T cd08225         158 LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLK--HPFEGNNL-----------------HQL--VLKICQ  216 (257)
T ss_pred             cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCC--CCCCCccH-----------------HHH--HHHHhc
Confidence             223357777887753321111 1235555444444433322  22211100                 000  000000


Q ss_pred             hccccccCcCCc---cccccccccCCCCchHHHHhhcCcce
Q 019481          241 TITFLSALKITG---CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .......+..+.   .+...|++.||++|||++++++|||+
T Consensus       217 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         217 GYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL  257 (257)
T ss_pred             ccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence            000000111121   22347799999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.98  E-value=4.3e-33  Score=248.80  Aligned_cols=139  Identities=16%  Similarity=0.111  Sum_probs=122.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc--hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP--LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      +.|+||.||++.+..+++.||+|.++....  ....+.+.+|+++++.++||||+++++.|.       +..+.++++||
T Consensus        10 ~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-------~~~~~~lv~e~   82 (305)
T cd05609          10 SNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFE-------TKRHLCMVMEY   82 (305)
T ss_pred             ecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEe-------cCCEEEEEEec
Confidence            578999999999999999999999875321  233456889999999999999999999664       34477899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      ++||+|.+++.....     +++..+..++.|++.||+|||+  ++++||||||+||+++.++.+||+|||+++.
T Consensus        83 ~~g~~L~~~l~~~~~-----~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~  150 (305)
T cd05609          83 VEGGDCATLLKNIGA-----LPVDMARMYFAETVLALEYLHN--YGIVHRDLKPDNLLITSMGHIKLTDFGLSKI  150 (305)
T ss_pred             CCCCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCccccCCchHHEEECCCCCEEEeeCCCccc
Confidence            999999999987665     8999999999999999999999  7899999999999999999999999999874

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.98  E-value=1.5e-32  Score=248.59  Aligned_cols=187  Identities=16%  Similarity=0.141  Sum_probs=143.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|.+...........+.+|+.++++++||||+++++++....  .......++++||+. 
T Consensus        15 ~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~~~~~~lv~e~~~-   91 (336)
T cd07849          15 EGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPS--FESFNDVYIVQELME-   91 (336)
T ss_pred             ecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeeccc--ccccceEEEEehhcc-
Confidence            58899999999999999999999865333344566788999999999999999998665332  122335789999996 


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc-
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD-  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~-  163 (340)
                      ++|.+.+....      +++..+..++.|+++||+|||+  .+|+||||||+||+++.++.+||+|||+++........ 
T Consensus        92 ~~l~~~~~~~~------l~~~~~~~i~~ql~~aL~~LH~--~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~  163 (336)
T cd07849          92 TDLYKLIKTQH------LSNDHIQYFLYQILRGLKYIHS--ANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHT  163 (336)
T ss_pred             cCHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHEEECCCCCEEECcccceeecccccccc
Confidence            58988886532      8999999999999999999999  77999999999999999999999999999876442211 


Q ss_pred             ---ceeeccceeeccCccccc--hhhhhHhHhCCcccccccccc
Q 019481          164 ---LTALDTSSVSAQSGKTGM--EMKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       164 ---~~~~gt~~~~~p~~~~~~--~~~~~~~~s~g~~~~~~~~~~  202 (340)
                         ....||..|+||+...+.  --...|+|+.|...+.+.++.
T Consensus       164 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~  207 (336)
T cd07849         164 GFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNR  207 (336)
T ss_pred             CCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence               234678888888643221  112346676666666655444

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.98  E-value=2.5e-32  Score=238.48  Aligned_cols=241  Identities=20%  Similarity=0.188  Sum_probs=169.6

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc-hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP-LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|.+..+++.||+|.++.... ....+.+.+|++++++++|+||+++++.+.       +....++++||+
T Consensus         9 g~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-------~~~~~~lv~e~~   81 (264)
T cd06626           9 GGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEV-------HREKVYIFMEYC   81 (264)
T ss_pred             ecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEe-------cCCEEEEEEecC
Confidence            358999999999998999999999986332 245677899999999999999999999543       444788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      ++++|.+++.....     +++..+..++.|++.||+|||+  .+|+|+||||+||+++.++.+||+|||++........
T Consensus        82 ~~~~L~~~~~~~~~-----~~~~~~~~i~~~i~~~l~~lh~--~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~  154 (264)
T cd06626          82 SGGTLEELLEHGRI-----LDEHVIRVYTLQLLEGLAYLHS--HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT  154 (264)
T ss_pred             CCCcHHHHHhhcCC-----CChHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence            99999999987654     8899999999999999999999  7899999999999999999999999999987654322


Q ss_pred             cc-----eeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHH
Q 019481          163 DL-----TALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIAT  237 (340)
Q Consensus       163 ~~-----~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (340)
                      ..     ...++..|++|+...+..            ........+.|+     .|++..++.+|..||.......... 
T Consensus       155 ~~~~~~~~~~~~~~~~~PE~~~~~~------------~~~~~~~~Dv~s-----~G~il~~l~~g~~pf~~~~~~~~~~-  216 (264)
T cd06626         155 TMGEEVQSLAGTPAYMAPEVITGGK------------GKGHGRAADIWS-----LGCVVLEMATGKRPWSELDNEFQIM-  216 (264)
T ss_pred             cccccccCCcCCcCccChhhccCCC------------CCCCCcccchHH-----HHHHHHHHHhCCCCccCCcchHHHH-
Confidence            11     234556666664322211            000111122243     4444444444444443221110000 


Q ss_pred             hhhhccccccCcCCc---------cccccccccCCCCchHHHHhhcCcce
Q 019481          238 LLSTITFLSALKITG---------CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       238 ~~~~~~~~~~~~~p~---------~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                        ..+.....+.+|.         .+...|++.||.+||++++++.|||+
T Consensus       217 --~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         217 --FHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             --HHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence              0011112222222         23447899999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.98  E-value=2.1e-32  Score=241.60  Aligned_cols=165  Identities=16%  Similarity=0.201  Sum_probs=132.1

Q ss_pred             CCCcceEEEEEEcCCCC-----ceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPFPDDR-----DDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~-----~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      ..|+||.||+|.+...+     +.||+|.++..........+.+|++++++++||||+++++++.       +....+++
T Consensus        14 g~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~-------~~~~~~~~   86 (283)
T cd05048          14 GEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCT-------KEQPTCML   86 (283)
T ss_pred             cCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEc-------CCCceEEE
Confidence            35899999999876554     6899999976544555677899999999999999999999654       33356789


Q ss_pred             eccccCCCHHHHhcccCCCc-----------cccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceE
Q 019481           79 KWLMQKKGLENVHIGEHPAS-----------VRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCN  147 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~k  147 (340)
                      +||+++|+|.+++.......           ...+++..+..++.|++.||+|||+  ++++||||||+||+++.++.+|
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~--~~i~H~dlkp~Nil~~~~~~~~  164 (283)
T cd05048          87 FEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS--HHFVHRDLAARNCLVGEGLTVK  164 (283)
T ss_pred             EecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh--CCeeccccccceEEEcCCCcEE
Confidence            99999999999997653211           1348899999999999999999999  8899999999999999999999


Q ss_pred             EeccccceeecccCC---cceeeccceeeccCc
Q 019481          148 LSDFSTAKVSAVENA---DLTALDTSSVSAQSG  177 (340)
Q Consensus       148 l~DFGla~~~~~~~~---~~~~~gt~~~~~p~~  177 (340)
                      |+|||+++.......   .....+++.|+|||.
T Consensus       165 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  197 (283)
T cd05048         165 ISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEA  197 (283)
T ss_pred             ECCCcceeeccccccccccCCCcccccccCHHH
Confidence            999999986543221   122345667888863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.98  E-value=1.8e-32  Score=239.49  Aligned_cols=159  Identities=16%  Similarity=0.131  Sum_probs=129.9

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|.+..+++.||+|++...  ....+.+.+|++++++++||||+++++++.       +....++++||++
T Consensus        15 g~g~~~~v~~~~~~~~~~~~~~K~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~~~   85 (263)
T cd05052          15 GGGQYGEVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT-------REPPFYIITEFMT   85 (263)
T ss_pred             CCcccceEEEEEEecCCceEEEEEecCC--chHHHHHHHHHHHHHhCCCCChhheEEEEc-------CCCCcEEEEEeCC
Confidence            3688999999999999999999998642  234567889999999999999999999654       3335679999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +|+|.+++.....   ..+++..++.++.|+++||+|||+  ++++||||||+||+++.++.+||+|||+++........
T Consensus        86 ~~~L~~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lH~--~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~  160 (263)
T cd05052          86 YGNLLDYLRECNR---QEVNAVVLLYMATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT  160 (263)
T ss_pred             CCcHHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHHh--CCEeecccCcceEEEcCCCcEEeCCCccccccccceee
Confidence            9999999976543   348999999999999999999999  88999999999999999999999999999876543211


Q ss_pred             c--eeeccceeeccC
Q 019481          164 L--TALDTSSVSAQS  176 (340)
Q Consensus       164 ~--~~~gt~~~~~p~  176 (340)
                      .  ...++..|++|+
T Consensus       161 ~~~~~~~~~~y~aPE  175 (263)
T cd05052         161 AHAGAKFPIKWTAPE  175 (263)
T ss_pred             ccCCCCCccccCCHH
Confidence            1  112244566665

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.98  E-value=1.6e-32  Score=243.69  Aligned_cols=185  Identities=15%  Similarity=0.110  Sum_probs=143.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCch-hhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPL-QLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|++..+++.+|+|.++..... .....+.+|++++++++||||+++++++...     +....++++||+
T Consensus        14 g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~-----~~~~~~lv~e~~   88 (293)
T cd07843          14 EEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGS-----NLDKIYMVMEYV   88 (293)
T ss_pred             cCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEec-----CCCcEEEEehhc
Confidence            4688999999999999999999999753222 2234567899999999999999999976432     235788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-C
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-N  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~  161 (340)
                      + ++|.+++.....    .+++..++.++.||++||+|||+  ++++||||||+||+++.++.+||+|||+++..... .
T Consensus        89 ~-~~L~~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~--~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~  161 (293)
T cd07843          89 E-HDLKSLMETMKQ----PFLQSEVKCLMLQLLSGVAHLHD--NWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK  161 (293)
T ss_pred             C-cCHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHH--CCeeeccCCHHHEEECCCCcEEEeecCceeeccCCcc
Confidence            7 599999876543    38999999999999999999999  77999999999999999999999999999876554 2


Q ss_pred             CcceeeccceeeccCccccchh--hhhHhHhCCcccccccc
Q 019481          162 ADLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAE  200 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~  200 (340)
                      ......++..|++|+.+.+...  ...|+|+.|...+.+..
T Consensus       162 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~  202 (293)
T cd07843         162 PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLT  202 (293)
T ss_pred             ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHh
Confidence            2233456777888865433221  23456665555554433

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.98  E-value=2.2e-32  Score=239.69  Aligned_cols=145  Identities=13%  Similarity=0.090  Sum_probs=119.6

Q ss_pred             CCCcceEEEEEEcCC--CCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPD--DRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~--~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|....  ....+|+|.+...........+.+|+++++.++||||+++++++.       +....+++|||
T Consensus         4 g~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~-------~~~~~~lv~e~   76 (269)
T cd05042           4 GNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCI-------ESIPYLLVLEF   76 (269)
T ss_pred             CccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEEC-------CCCceEEEEEe
Confidence            468999999996533  345788888765444455567889999999999999999999664       33467899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceee
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVS  157 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~  157 (340)
                      +++|+|.+++...........++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++..
T Consensus        77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~  150 (269)
T cd05042          77 CPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ--ADFIHSDLALRNCQLTADLSVKIGDYGLALEQ  150 (269)
T ss_pred             CCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh--cCEecccccHhheEecCCCcEEEecccccccc
Confidence            999999999987543211235788899999999999999999  88999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.98  E-value=2.3e-32  Score=241.78  Aligned_cols=185  Identities=17%  Similarity=0.141  Sum_probs=145.4

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|++..+++.||+|.++... .....+.+.+|++++++++|+||+++++.|..       ....++++||+
T Consensus        10 ~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------~~~~~iv~e~~   82 (288)
T cd07833          10 GEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR-------KGRLYLVFEYV   82 (288)
T ss_pred             cccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE-------CCEEEEEEecC
Confidence            45889999999999999999999987532 23345678999999999999999999997653       34678999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-  161 (340)
                      +++.+..+......     +++..+..++.||+.||.|||+  ++++||||||+||+++.++.+||+|||++....... 
T Consensus        83 ~~~~l~~~~~~~~~-----~~~~~~~~~~~~i~~~l~~LH~--~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~  155 (288)
T cd07833          83 ERTLLELLEASPGG-----LPPDAVRSYIWQLLQAIAYCHS--HNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA  155 (288)
T ss_pred             CCCHHHHHHhcCCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence            98777766665444     8999999999999999999999  889999999999999999999999999998766543 


Q ss_pred             -CcceeeccceeeccCccccc-hh-hhhHhHhCCcccccccccc
Q 019481          162 -ADLTALDTSSVSAQSGKTGM-EM-KMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       162 -~~~~~~gt~~~~~p~~~~~~-~~-~~~~~~s~g~~~~~~~~~~  202 (340)
                       ......++..|++|+...+. .. ...|+|+.|...+.+..+.
T Consensus       156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~  199 (288)
T cd07833         156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGE  199 (288)
T ss_pred             ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCC
Confidence             23345677888888654433 11 1335666555555544433

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.98  E-value=2.5e-32  Score=239.68  Aligned_cols=192  Identities=16%  Similarity=0.114  Sum_probs=136.7

Q ss_pred             CCCcceEEEEEEcCCCCc--eEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRD--DVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~--~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.||+|++..++.  .+|+|.++.. ......+.+.+|++++++++||||+++++++..... .......++++|
T Consensus         8 g~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~~~~~~~v~e   86 (272)
T cd05075           8 GEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVE-SEGYPSPVVILP   86 (272)
T ss_pred             CcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCc-ccCCCCcEEEEE
Confidence            468999999999877765  6899998753 234456778899999999999999999985532211 112224678999


Q ss_pred             cccCCCHHHHhcccCC-CccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           81 LMQKKGLENVHIGEHP-ASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      |+++|+|.+++..... .....+++..+..++.|++.||+|||+  ++|+||||||+|||++.++.+||+|||+++.+..
T Consensus        87 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  164 (272)
T cd05075          87 FMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS--KSFIHRDLAARNCMLNENMNVCVADFGLSKKIYN  164 (272)
T ss_pred             eCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH--CCeeccccchhheEEcCCCCEEECCCCcccccCc
Confidence            9999999988743211 011348999999999999999999999  8899999999999999999999999999987654


Q ss_pred             cCCc---ceeeccceeeccCccccchhh-hhHhHhCCcccccc
Q 019481          160 ENAD---LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDE  198 (340)
Q Consensus       160 ~~~~---~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~  198 (340)
                      ....   ....+++.|++|+...+.... ..|+|+.|...+.+
T Consensus       165 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el  207 (272)
T cd05075         165 GDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEI  207 (272)
T ss_pred             ccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHH
Confidence            3211   112234456666433222111 23555544444443

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.98  E-value=1.8e-33  Score=229.70  Aligned_cols=184  Identities=16%  Similarity=0.155  Sum_probs=146.1

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchh-hHHHHHHHHHHhhhcCCCcccccccccccccccc-CCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQ-LRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLT-GDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~-~~~~~~~~~~e~   81 (340)
                      .+|.||.||+|+.+++++.||+|.+-.+.... --....+|+++|..++|+|++.+++...+...-. .++...|+|+++
T Consensus        26 gqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~  105 (376)
T KOG0669|consen   26 GQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDF  105 (376)
T ss_pred             CCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHH
Confidence            36899999999999999999998865322222 2344689999999999999999888665443322 255678999999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      |+. +|.-++.+..-    .++..++..++.++++||.|+|+  ..|+|||+||+|+||+.+|.+||+|||+++.+....
T Consensus       106 ceh-DLaGlLsn~~v----r~sls~Ikk~Mk~Lm~GL~~iHr--~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~  178 (376)
T KOG0669|consen  106 CEH-DLAGLLSNRKV----RFSLSEIKKVMKGLMNGLYYIHR--NKILHRDMKAANVLITKDGILKLADFGLARAFSTSK  178 (376)
T ss_pred             hhh-hHHHHhcCccc----cccHHHHHHHHHHHHHHHHHHHH--hhHHhhcccHhhEEEcCCceEEeeccccccceeccc
Confidence            985 99999988753    49999999999999999999999  669999999999999999999999999998764422


Q ss_pred             Cc-----ce------------eeccceeeccCccccchhhhhHhHhCCccc
Q 019481          162 AD-----LT------------ALDTSSVSAQSGKTGMEMKMAQLESGGWRA  195 (340)
Q Consensus       162 ~~-----~~------------~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~  195 (340)
                      ..     ..            ..|...|..|.|.||.++++.++|+ +.+.
T Consensus       179 n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwt-rspi  228 (376)
T KOG0669|consen  179 NVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWT-RSPI  228 (376)
T ss_pred             ccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHc-cCcc
Confidence            11     11            1345555666799999999999998 4444

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.98  E-value=2.4e-32  Score=242.31  Aligned_cols=247  Identities=18%  Similarity=0.127  Sum_probs=167.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .+|+||.||+|.+..+++.+|+|++...  ......+.+|+.+++++ +||||++++++|.....  ......++++||+
T Consensus        31 ~~g~~~~vy~~~~~~~~~~~aik~~~~~--~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~--~~~~~~~lv~ey~  106 (291)
T cd06639          31 GKGTYGKVYKVTNKKDGSLAAVKILDPI--SDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADK--LVGGQLWLVLELC  106 (291)
T ss_pred             ecCCCeEEEEEEECCCCCEEEEEEeccc--ccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccc--cCCCeeEEEEEEC
Confidence            3689999999999999999999998642  22345678899999999 79999999998754311  1224678999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-  161 (340)
                      ++|+|.++++.... ....+++..++.++.|++.||+|||+  .+++||||||+||+++.++.+||+|||+++...... 
T Consensus       107 ~~~sL~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~--~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~  183 (291)
T cd06639         107 NGGSVTELVKGLLI-CGQRLDEAMISYILYGALLGLQHLHN--NRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL  183 (291)
T ss_pred             CCCcHHHHHHHhhh-cCCCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHEEEcCCCCEEEeecccchhcccccc
Confidence            99999998864211 01248999999999999999999999  779999999999999999999999999998665432 


Q ss_pred             CcceeeccceeeccCccccch------hhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHH
Q 019481          162 ADLTALDTSSVSAQSGKTGME------MKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLI  235 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~------~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (340)
                      ......|+..|++|+.+..-.      -...|+|+.|...                     .++.+|..|+.........
T Consensus       184 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~---------------------~el~~g~~p~~~~~~~~~~  242 (291)
T cd06639         184 RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITA---------------------IELGDGDPPLFDMHPVKTL  242 (291)
T ss_pred             cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHH---------------------HHHhhCCCCCCCCcHHHHH
Confidence            223345677788775432111      0122344433333                     3333333333221111000


Q ss_pred             HHhhhhcc--ccccCcCC---ccccccccccCCCCchHHHHhhcCcce
Q 019481          236 ATLLSTIT--FLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       236 ~~~~~~~~--~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ........  .......+   ..+...|++.||.+||+++++++|||+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~  290 (291)
T cd06639         243 FKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFI  290 (291)
T ss_pred             HHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCccc
Confidence            00000000  00000000   123447899999999999999999998

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=4e-32  Score=239.09  Aligned_cols=237  Identities=17%  Similarity=0.117  Sum_probs=171.4

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC---CCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF---HPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      +.|+||.||+|.+..+++.||+|.++........+.+.+|++++++++   ||||++++++|.       +....++++|
T Consensus        10 ~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~-------~~~~~~lv~e   82 (277)
T cd06917          10 GRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYL-------KGPRLWIIME   82 (277)
T ss_pred             eccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeee-------eCCEEEEEEe
Confidence            468999999999999999999999875444445567889999999997   999999999664       3346779999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      |+++++|.++++.. .     +++..+..++.|++.||.|||+  .+|+||||+|+||+++.++.++|+|||++......
T Consensus        83 ~~~~~~L~~~~~~~-~-----l~~~~~~~i~~~i~~~l~~lh~--~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~  154 (277)
T cd06917          83 YAEGGSVRTLMKAG-P-----IAEKYISVIIREVLVALKYIHK--VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQN  154 (277)
T ss_pred             cCCCCcHHHHHHcc-C-----CCHHHHHHHHHHHHHHHHHHHh--CCcccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence            99999999998763 3     8999999999999999999999  78999999999999999999999999999876554


Q ss_pred             CC-cceeeccceeeccCccccch--hhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHH
Q 019481          161 NA-DLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIAT  237 (340)
Q Consensus       161 ~~-~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (340)
                      .. .....|+..|++|+...+..  -...|+|+.|...+.+..+.  .|+...........+                  
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~--~p~~~~~~~~~~~~~------------------  214 (277)
T cd06917         155 SSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGN--PPYSDVDAFRAMMLI------------------  214 (277)
T ss_pred             ccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCC--CCCCCCChhhhhhcc------------------
Confidence            32 23446777788886443211  11345555555555444333  222111110000000                  


Q ss_pred             hhhhccccccCcCCc--------cccccccccCCCCchHHHHhhcCcceee
Q 019481          238 LLSTITFLSALKITG--------CKSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       238 ~~~~~~~~~~~~~p~--------~~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                           .....+.++.        .+-..|++.||++||++++++.|||+.+
T Consensus       215 -----~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~  260 (277)
T cd06917         215 -----PKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKA  260 (277)
T ss_pred             -----ccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhc
Confidence                 0001111111        1233689999999999999999999943

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.98  E-value=3.7e-32  Score=238.33  Aligned_cols=143  Identities=18%  Similarity=0.220  Sum_probs=124.1

Q ss_pred             CCCcceEEEEEEcCCCCc---eEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRD---DVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~---~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.||+|.+..+++   .||+|+++........+.+.+|++++++++||||+++++++.       +....++++|
T Consensus        13 g~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~-------~~~~~~lv~e   85 (269)
T cd05065          13 GAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT-------KSRPVMIITE   85 (269)
T ss_pred             cCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEEC-------CCCceEEEEe
Confidence            468999999999877665   599999976544555678999999999999999999999664       3346779999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      |+++|+|.+++.....    .+++.+++.++.|++.||+|||+  ++++||||||+||+++.++.+||+|||+++....
T Consensus        86 ~~~~~~L~~~l~~~~~----~~~~~~~~~i~~~l~~al~~lH~--~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~  158 (269)
T cd05065          86 FMENGALDSFLRQNDG----QFTVIQLVGMLRGIAAGMKYLSE--MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED  158 (269)
T ss_pred             cCCCCcHHHHHhhCCC----CCCHHHHHHHHHHHHHHHHHHHH--CCEeecccChheEEEcCCCcEEECCCcccccccc
Confidence            9999999999986543    38999999999999999999999  8899999999999999999999999999976654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.98  E-value=7.9e-32  Score=243.74  Aligned_cols=165  Identities=19%  Similarity=0.106  Sum_probs=129.6

Q ss_pred             CCCcceEEEEEEcCC-----CCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeee
Q 019481            4 SAPSFSVLIHVPFPD-----DRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWK   77 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~-----~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~   77 (340)
                      ..|+||.||+|++..     +++.||+|+++........+.+.+|+++++++ +||||+++++++..      +....++
T Consensus        16 G~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~------~~~~~~~   89 (337)
T cd05054          16 GRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTK------PGGPLMV   89 (337)
T ss_pred             ccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEec------CCCCEEE
Confidence            368999999997543     45789999997544444456788999999999 79999999996642      2336778


Q ss_pred             eeccccCCCHHHHhcccCCC--------------------------------------------------------cccc
Q 019481           78 NKWLMQKKGLENVHIGEHPA--------------------------------------------------------SVRQ  101 (340)
Q Consensus        78 ~~e~~~~gsL~~~l~~~~~~--------------------------------------------------------~~~~  101 (340)
                      ++||+++|+|.+++......                                                        ....
T Consensus        90 v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (337)
T cd05054          90 IVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEP  169 (337)
T ss_pred             EEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcC
Confidence            99999999999998653210                                                        0125


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC---cceeeccceeeccC
Q 019481          102 LRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA---DLTALDTSSVSAQS  176 (340)
Q Consensus       102 l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~---~~~~~gt~~~~~p~  176 (340)
                      +++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.+.....   .....++..|++|+
T Consensus       170 l~~~~~~~~~~qi~~aL~~lH~--~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE  245 (337)
T cd05054         170 LTLEDLISYSFQVARGMEFLAS--RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE  245 (337)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcH
Confidence            8999999999999999999999  8899999999999999999999999999987643221   11223456688886

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.98  E-value=2e-32  Score=241.51  Aligned_cols=185  Identities=14%  Similarity=0.067  Sum_probs=143.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|.++............+|+.+++++. ||||+++++++.+.     +.+..++++||++
T Consensus         9 ~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~-----~~~~~~lv~e~~~   83 (282)
T cd07831           9 EGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDR-----KTGRLALVFELMD   83 (282)
T ss_pred             ccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecC-----CCCcEEEEEecCC
Confidence            58899999999999999999999875322223334567999999985 99999999976532     2246789999997


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                       |+|.+.+.....    .+++..+..++.|++.||+|||+  .+++||||||+||+++. +.+||+|||+++........
T Consensus        84 -~~l~~~l~~~~~----~~~~~~~~~~~~qi~~~L~~LH~--~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~  155 (282)
T cd07831          84 -MNLYELIKGRKR----PLPEKRVKSYMYQLLKSLDHMHR--NGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPY  155 (282)
T ss_pred             -ccHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHH--CCceecccCHHHEEEcC-CCeEEEecccccccccCCCc
Confidence             588888876543    38999999999999999999999  78999999999999999 99999999999877655444


Q ss_pred             ceeeccceeeccCccccch--hhhhHhHhCCcccccccccc
Q 019481          164 LTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~  202 (340)
                      ....++..|++|+.+.+..  -...|+|+.|...+.+....
T Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~  196 (282)
T cd07831         156 TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLF  196 (282)
T ss_pred             CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCC
Confidence            4556788888887543211  12356777666666655443

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.98  E-value=1.2e-31  Score=235.18  Aligned_cols=164  Identities=13%  Similarity=0.043  Sum_probs=128.2

Q ss_pred             CCCcceEEEEEEcC--CCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFP--DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~--~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|...  .++..+|+|.++..........+.+|+.++++++||||+++++++..       ....+++|||
T Consensus         4 g~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~~~lv~e~   76 (269)
T cd05087           4 GNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTE-------VTPYLLVMEF   76 (269)
T ss_pred             cccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC-------CCCcEEEEEC
Confidence            46889999999854  35567999998764444455678899999999999999999996643       3356799999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+++...........++..+..++.|++.||+|||+  ++++||||||+||+++.++++||+|||+++......
T Consensus        77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~--~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~  154 (269)
T cd05087          77 CPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK--NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKED  154 (269)
T ss_pred             CCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH--CCEeccccCcceEEEcCCCcEEECCccccccccCcc
Confidence            999999999976432112246778889999999999999999  889999999999999999999999999997543322


Q ss_pred             C---cceeeccceeeccC
Q 019481          162 A---DLTALDTSSVSAQS  176 (340)
Q Consensus       162 ~---~~~~~gt~~~~~p~  176 (340)
                      .   .....|+..|++|+
T Consensus       155 ~~~~~~~~~~~~~y~aPE  172 (269)
T cd05087         155 YYVTPDQLWVPLRWIAPE  172 (269)
T ss_pred             eeecCCCcCCcccccCHh
Confidence            1   11223455566664

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.98  E-value=2.6e-32  Score=243.58  Aligned_cols=145  Identities=21%  Similarity=0.307  Sum_probs=120.2

Q ss_pred             CCCcceEEEEEEcCCCCce--EEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRDD--VMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~--vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.||+|.++.++..  +|+|..+........+.+.+|++++.++ +||||+++++++.       +..+.++++|
T Consensus        16 g~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~-------~~~~~~lv~e   88 (303)
T cd05088          16 GEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-------HRGYLYLAIE   88 (303)
T ss_pred             cCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEEC-------CCCCceEEEE
Confidence            3689999999998777654  5777765433444566788999999999 8999999999664       3346789999


Q ss_pred             cccCCCHHHHhcccCCC-----------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEe
Q 019481           81 LMQKKGLENVHIGEHPA-----------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLS  149 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~  149 (340)
                      |+++|+|.+++......           ....+++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+
T Consensus        89 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~--~gi~H~dlkp~Nili~~~~~~kl~  166 (303)
T cd05088          89 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ--KQFIHRDLAARNILVGENYVAKIA  166 (303)
T ss_pred             eCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh--CCccccccchheEEecCCCcEEeC
Confidence            99999999999765320           01248899999999999999999999  889999999999999999999999


Q ss_pred             ccccceee
Q 019481          150 DFSTAKVS  157 (340)
Q Consensus       150 DFGla~~~  157 (340)
                      |||+++..
T Consensus       167 dfg~~~~~  174 (303)
T cd05088         167 DFGLSRGQ  174 (303)
T ss_pred             ccccCccc
Confidence            99998643

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.98  E-value=7.8e-33  Score=246.09  Aligned_cols=238  Identities=18%  Similarity=0.106  Sum_probs=168.6

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|++..+++.||+|.+.... ....+.+.+|+.+++.++||||++++++|.       +....++++||++
T Consensus        28 g~g~~g~vy~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-------~~~~~~lv~e~~~   99 (296)
T cd06655          28 GQGASGTVFTAIDVATGQEVAIKQINLQK-QPKKELIINEILVMKELKNPNIVNFLDSFL-------VGDELFVVMEYLA   99 (296)
T ss_pred             ecCCCeEEEEEEEcCCCcEEEEEEEeccc-CchHHHHHHHHHHHHhcCCCceeeeeeeEe-------cCceEEEEEEecC
Confidence            35889999999999999999999987533 233466889999999999999999999764       3346789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC-
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA-  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~-  162 (340)
                      +++|.+++... .     +++.++..++.|++.||.|||+  .+++||||||+||+++.++.+||+|||++........ 
T Consensus       100 ~~~L~~~~~~~-~-----l~~~~~~~i~~~l~~al~~LH~--~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~  171 (296)
T cd06655         100 GGSLTDVVTET-C-----MDEAQIAAVCRECLQALEFLHA--NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK  171 (296)
T ss_pred             CCcHHHHHHhc-C-----CCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEEEccCccchhccccccc
Confidence            99999998753 2     8999999999999999999999  7899999999999999999999999999886654322 


Q ss_pred             cceeeccceeeccCccccchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHH--Hhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIA--TLL  239 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~  239 (340)
                      .....|+..|++|+.+.+... ...|+|+.|...+.+.+                     |..+|..........  ...
T Consensus       172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~llt---------------------g~~pf~~~~~~~~~~~~~~~  230 (296)
T cd06655         172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVE---------------------GEPPYLNENPLRALYLIATN  230 (296)
T ss_pred             CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHh---------------------CCCCCCCCCHHHHHHHHHhc
Confidence            233467788888864433221 12345544444443333                     222222111000000  000


Q ss_pred             hhccccccCcCC---ccccccccccCCCCchHHHHhhcCcce
Q 019481          240 STITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       240 ~~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ..........++   ..+...|++.||.+||+++++++|||+
T Consensus       231 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~  272 (296)
T cd06655         231 GTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFL  272 (296)
T ss_pred             CCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHh
Confidence            000000111111   123457899999999999999999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.98  E-value=2.8e-32  Score=240.34  Aligned_cols=237  Identities=18%  Similarity=0.082  Sum_probs=163.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc--hhhHHHHHHHH---HHhhhcCCCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP--LQLRRDDDGKL---DSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~~E~---~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      ..|+||.||+|.+..+++.||+|++.....  .........|.   ..++..+||||++++++|.       +....+++
T Consensus         3 g~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~~~~~~~v   75 (278)
T cd05606           3 GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH-------TPDKLSFI   75 (278)
T ss_pred             ccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeee-------cCCEEEEE
Confidence            468899999999999999999999875221  11122233343   3455567999999999765       33467789


Q ss_pred             eccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec
Q 019481           79 KWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      +||++||+|.+++.....     +++..++.++.|++.||.|||+  .+|+||||||+||+++.++.+||+|||+++...
T Consensus        76 ~e~~~g~~L~~~l~~~~~-----l~~~~~~~~~~ql~~~l~~lH~--~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~  148 (278)
T cd05606          76 LDLMNGGDLHYHLSQHGV-----FSEAEMRFYAAEIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDFS  148 (278)
T ss_pred             EecCCCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCEEcCCCCHHHEEECCCCCEEEccCcCccccC
Confidence            999999999999987654     9999999999999999999999  779999999999999999999999999997654


Q ss_pred             ccCCcceeeccceeeccCccccc-hh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHH
Q 019481          159 VENADLTALDTSSVSAQSGKTGM-EM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIA  236 (340)
Q Consensus       159 ~~~~~~~~~gt~~~~~p~~~~~~-~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (340)
                      ... .....|+..|++|+.+.+. .. ...|+|+.|...+.+.++.  .||......              .....    
T Consensus       149 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~--~p~~~~~~~--------------~~~~~----  207 (278)
T cd05606         149 KKK-PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH--SPFRQHKTK--------------DKHEI----  207 (278)
T ss_pred             ccC-CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCC--CCCCCCCcc--------------chHHH----
Confidence            332 2345688888888654321 11 1235555555554444333  222111000              00000    


Q ss_pred             HhhhhccccccCcCCc-------cccccccccCCCCch-----HHHHhhcCcce
Q 019481          237 TLLSTITFLSALKITG-------CKSEEGYKNNSSLNP-----ICQIVNQHPFY  278 (340)
Q Consensus       237 ~~~~~~~~~~~~~~p~-------~~~~~~l~~dP~~R~-----t~~~ll~hp~~  278 (340)
                         ........+..|.       ++...|+++||++|+     +++++++|||+
T Consensus       208 ---~~~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~  258 (278)
T cd05606         208 ---DRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFF  258 (278)
T ss_pred             ---HHHhhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccc
Confidence               0000011112222       233467999999999     99999999999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.98  E-value=1.2e-31  Score=243.32  Aligned_cols=166  Identities=19%  Similarity=0.113  Sum_probs=129.1

Q ss_pred             CCCcceEEEEEEc-----CCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeee
Q 019481            4 SAPSFSVLIHVPF-----PDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWK   77 (340)
Q Consensus         4 ~~G~fg~V~~~~~-----~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~   77 (340)
                      ..|+||.||+|++     ..+++.||+|+++..........+.+|+.++.++ +||||+++++++..      .....++
T Consensus        16 G~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~------~~~~~~l   89 (343)
T cd05103          16 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK------PGGPLMV   89 (343)
T ss_pred             cCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeec------CCCceEE
Confidence            3689999999984     3567899999997644444556788999999999 68999999996532      2335678


Q ss_pred             eeccccCCCHHHHhcccCCC------------------------------------------------------------
Q 019481           78 NKWLMQKKGLENVHIGEHPA------------------------------------------------------------   97 (340)
Q Consensus        78 ~~e~~~~gsL~~~l~~~~~~------------------------------------------------------------   97 (340)
                      ++||+++|+|.+++......                                                            
T Consensus        90 v~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (343)
T cd05103          90 IVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQE  169 (343)
T ss_pred             EEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhh
Confidence            99999999999998753210                                                            


Q ss_pred             --ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC---cceeecccee
Q 019481           98 --SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA---DLTALDTSSV  172 (340)
Q Consensus        98 --~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~---~~~~~gt~~~  172 (340)
                        ....+++..+..++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+++.......   .....++..|
T Consensus       170 ~~~~~~~~~~~~~~~~~qi~~al~~lH~--~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y  247 (343)
T cd05103         170 DLYKKVLTLEDLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW  247 (343)
T ss_pred             hhhhccCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcce
Confidence              01237888899999999999999999  8899999999999999999999999999986533221   1112345567


Q ss_pred             eccCc
Q 019481          173 SAQSG  177 (340)
Q Consensus       173 ~~p~~  177 (340)
                      ++|+.
T Consensus       248 ~aPE~  252 (343)
T cd05103         248 MAPET  252 (343)
T ss_pred             ECcHH
Confidence            88863

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.98  E-value=2.7e-32  Score=237.64  Aligned_cols=142  Identities=16%  Similarity=0.235  Sum_probs=121.6

Q ss_pred             CCCcceEEEEEEcC--CCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFP--DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~--~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|++.  .++..||+|++.........+.+.+|++++++++||||+++++++..        ...++++||
T Consensus         4 g~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~--------~~~~lv~e~   75 (257)
T cd05115           4 GSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA--------EALMLVMEM   75 (257)
T ss_pred             CCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC--------CCeEEEEEe
Confidence            36889999999764  45667999999765444556778999999999999999999996532        256799999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      +++|+|.+++.....    .+++..++.++.|++.||+|||+  ++++||||||+|||++.++.+||+|||+++....
T Consensus        76 ~~~~~L~~~l~~~~~----~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~  147 (257)
T cd05115          76 ASGGPLNKFLSGKKD----EITVSNVVELMHQVSMGMKYLEG--KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGA  147 (257)
T ss_pred             CCCCCHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHh--cCeeecccchheEEEcCCCcEEeccCCccccccC
Confidence            999999999976443    38999999999999999999999  8899999999999999999999999999986544

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.98  E-value=3.1e-32  Score=237.21  Aligned_cols=180  Identities=14%  Similarity=0.122  Sum_probs=135.4

Q ss_pred             CCCcceEEEEEEc--CCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPF--PDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~--~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.||+|.+  ..+++.+|+|+++... .....+.+.+|+.+++.++||||+++++++..        ...++++|
T Consensus         4 g~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------~~~~lv~e   75 (257)
T cd05116           4 GSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA--------ESWMLVME   75 (257)
T ss_pred             CCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC--------CCcEEEEe
Confidence            4688999999964  5677899999987532 23445678999999999999999999985431        24568999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      |+++|+|.+++.....     +++..+..++.|++.||+|||+  ++|+||||||+||+++.++.+||+|||+++.....
T Consensus        76 ~~~~~~L~~~l~~~~~-----~~~~~~~~i~~qi~~al~~lH~--~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~  148 (257)
T cd05116          76 LAELGPLNKFLQKNKH-----VTEKNITELVHQVSMGMKYLEE--TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGAD  148 (257)
T ss_pred             cCCCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCEeecccchhhEEEcCCCeEEECCCccccccCCC
Confidence            9999999999987655     8999999999999999999999  88999999999999999999999999999876543


Q ss_pred             CCc----ceeeccceeeccCccccchh-hhhHhHhCCcccccc
Q 019481          161 NAD----LTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDE  198 (340)
Q Consensus       161 ~~~----~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~  198 (340)
                      ...    ....++..|++|+....... ...|+|+.|...+++
T Consensus       149 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el  191 (257)
T cd05116         149 ENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEA  191 (257)
T ss_pred             CCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHH
Confidence            221    11122355666643221111 123555544444443

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.98  E-value=1.3e-31  Score=236.76  Aligned_cols=183  Identities=19%  Similarity=0.181  Sum_probs=137.9

Q ss_pred             CCCcceEEEEEE----cCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            4 SAPSFSVLIHVP----FPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         4 ~~G~fg~V~~~~----~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      ..|+||.||+|.    +..+++.||+|.+.... ....+.+.+|++++++++||||+++++++..     .+....++++
T Consensus        13 g~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~~~lv~   86 (284)
T cd05081          13 GKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST-AEHLRDFEREIEILKSLQHDNIVKYKGVCYS-----AGRRNLRLVM   86 (284)
T ss_pred             cCCCCceEEEEEecCCcCCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeEEEEEEcc-----CCCCceEEEE
Confidence            468899999997    45678899999987432 3445678999999999999999999986532     2344677999


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      ||+++|+|.+++.....    .+++..+..++.|++.||+|||+  ++|+||||||+||+++.++.+||+|||+++....
T Consensus        87 e~~~~~~L~~~l~~~~~----~l~~~~~~~~~~~l~~aL~~LH~--~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~  160 (284)
T cd05081          87 EYLPYGSLRDYLQKHRE----RLDHRKLLLYASQICKGMEYLGS--KRYVHRDLATRNILVESENRVKIGDFGLTKVLPQ  160 (284)
T ss_pred             EecCCCCHHHHHHhcCc----CCCHHHHHHHHHHHHHHHHHHHH--CCceeccCCHhhEEECCCCeEEECCCcccccccC
Confidence            99999999999976543    38999999999999999999999  8899999999999999999999999999987654


Q ss_pred             cCCcc----eeeccceeeccCccccchh-hhhHhHhCCcccccc
Q 019481          160 ENADL----TALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDE  198 (340)
Q Consensus       160 ~~~~~----~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~  198 (340)
                      .....    ...++..|++|+...+... ...|+|+.|...+.+
T Consensus       161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el  204 (284)
T cd05081         161 DKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL  204 (284)
T ss_pred             CCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHH
Confidence            32211    1112334667753322111 123556555555444

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.98  E-value=4.2e-32  Score=243.39  Aligned_cols=191  Identities=14%  Similarity=0.057  Sum_probs=143.9

Q ss_pred             CCCcceEEEEEEcCC--CCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            4 SAPSFSVLIHVPFPD--DRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~--~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      .+|+||.||+|++..  +++.||+|.+....  .....+.+.+|++++++++||||++++++|...     +....++++
T Consensus         9 g~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~~~lv~   83 (316)
T cd07842           9 GRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH-----ADKSVYLLF   83 (316)
T ss_pred             ccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC-----CCceEEEEE
Confidence            367899999999988  89999999997522  122345678899999999999999999977532     335788999


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC----CCceEEeccccce
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE----TFKCNLSDFSTAK  155 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~----~~~~kl~DFGla~  155 (340)
                      ||+++ +|.+.+..........+++..+..++.||+.||+|||+  ++|+||||||+||+++.    ++.+||+|||+++
T Consensus        84 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~  160 (316)
T cd07842          84 DYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS--NWVLHRDLKPANILVMGEGPERGVVKIGDLGLAR  160 (316)
T ss_pred             eCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh--CCEeeCCCCHHHEEEcCCCCccceEEECCCcccc
Confidence            99974 78777754332111258999999999999999999999  88999999999999999    9999999999998


Q ss_pred             eecccCC----cceeeccceeeccCccccchh--hhhHhHhCCcccccccccc
Q 019481          156 VSAVENA----DLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       156 ~~~~~~~----~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~~  202 (340)
                      .......    .....++..|+||+.+.+...  ...|+|+.|...+.+.++.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~  213 (316)
T cd07842         161 LFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLE  213 (316)
T ss_pred             ccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcC
Confidence            6644322    223456777888865443221  2346676666666554443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.98  E-value=2.7e-32  Score=244.04  Aligned_cols=187  Identities=14%  Similarity=0.109  Sum_probs=142.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCch-hhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPL-QLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|++..+++.||+|.++..... .......+|++++++++|+||++++++|...     +....++++||+
T Consensus        16 g~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~~~lv~e~~   90 (309)
T cd07845          16 GEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGK-----HLDSIFLVMEYC   90 (309)
T ss_pred             eecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecC-----CCCeEEEEEecC
Confidence            3688999999999999999999998753222 2233467899999999999999999976432     234678999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      . ++|.+++.....    .+++..+..++.||++||+|||+  .+++||||||+||+++.++.+||+|||+++.......
T Consensus        91 ~-~~l~~~l~~~~~----~l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~  163 (309)
T cd07845          91 E-QDLASLLDNMPT----PFSESQVKCLMLQLLRGLQYLHE--NFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAK  163 (309)
T ss_pred             C-CCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEECCCCCEEECccceeeecCCccC
Confidence            6 589888876543    38999999999999999999999  7799999999999999999999999999987754322


Q ss_pred             -cceeeccceeeccCccccch--hhhhHhHhCCcccccccccc
Q 019481          163 -DLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 -~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~  202 (340)
                       .....++..|++|+.+.+..  -...|+|+.|...+.+..+.
T Consensus       164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~  206 (309)
T cd07845         164 PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHK  206 (309)
T ss_pred             CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCC
Confidence             22233466688886543321  12346666666665554443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.98  E-value=4.5e-32  Score=236.75  Aligned_cols=243  Identities=17%  Similarity=0.144  Sum_probs=170.4

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      +.|++|.||+|++..+++.||+|++.........+.+.+|++.+++++||||+++++.|.       +....++++||++
T Consensus        10 ~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-------~~~~~~lv~e~~~   82 (264)
T cd06623          10 GQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFY-------KEGEISIVLEYMD   82 (264)
T ss_pred             eecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-------cCCeEEEEEEecC
Confidence            357899999999999999999999976443345677899999999999999999999665       3357889999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhc-CCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHS-SEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      +++|.+++.....     +++..+..++.|+++||+|||+ .+  ++||||+|+||+++.++.++|+|||++........
T Consensus        83 ~~~L~~~l~~~~~-----l~~~~~~~~~~~l~~~l~~lh~~~~--~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~  155 (264)
T cd06623          83 GGSLADLLKKVGK-----IPEPVLAYIARQILKGLDYLHTKRH--IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD  155 (264)
T ss_pred             CCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHhccCC--CccCCCCHHHEEECCCCCEEEccCccceecccCCC
Confidence            9999999987655     9999999999999999999998 77  99999999999999999999999999987755433


Q ss_pred             c-ceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          163 D-LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       163 ~-~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      . ....++..|++|+...+.... ..|+|+.|...+...++.  .|+.....           ..+.+..     .....
T Consensus       156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~--~p~~~~~~-----------~~~~~~~-----~~~~~  217 (264)
T cd06623         156 QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGK--FPFLPPGQ-----------PSFFELM-----QAICD  217 (264)
T ss_pred             cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCC--CCCccccc-----------cCHHHHH-----HHHhc
Confidence            2 245677778887533221111 124444333333333222  22111100           0011111     10110


Q ss_pred             hccccccCc-CCc---cccccccccCCCCchHHHHhhcCcce
Q 019481          241 TITFLSALK-ITG---CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~~~~-~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ......... .+.   .+-..|+..+|++||+++++++|||+
T Consensus       218 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~  259 (264)
T cd06623         218 GPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFI  259 (264)
T ss_pred             CCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHH
Confidence            000000111 111   12346799999999999999999999

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.98  E-value=4.6e-32  Score=237.30  Aligned_cols=142  Identities=17%  Similarity=0.223  Sum_probs=123.3

Q ss_pred             CCCcceEEEEEEcCCC---CceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDD---RDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~---~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      +.|+||.||+|+...+   ...||+|.++..........+.+|+.++++++||||+++++++.       +....++++|
T Consensus        13 g~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~iv~e   85 (266)
T cd05033          13 GGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVT-------KSRPVMIITE   85 (266)
T ss_pred             cCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEe-------cCCceEEEEE
Confidence            4688999999998644   45799999876555555677899999999999999999999654       3345679999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      |+++|+|.+++.....    .+++..+..++.|++.||+|||+  ++|+||||||+||+++.++.+||+|||+++...
T Consensus        86 ~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~Lh~--~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~  157 (266)
T cd05033          86 YMENGSLDKFLRENDG----KFTVGQLVGMLRGIASGMKYLSE--MNYVHRDLAARNILVNSNLVCKVSDFGLSRRLE  157 (266)
T ss_pred             cCCCCCHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCcceEEEcCCCCEEECccchhhccc
Confidence            9999999999987543    38999999999999999999999  889999999999999999999999999998775

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.98  E-value=6.2e-32  Score=236.51  Aligned_cols=185  Identities=17%  Similarity=0.171  Sum_probs=141.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeec--cCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHEL--ITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~--~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|++..+++.||+|.++.  .........+.+|++++++++||||++++++|..       .+..++++||
T Consensus        11 ~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~~~v~e~   83 (267)
T cd08228          11 GRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIE-------DNELNIVLEL   83 (267)
T ss_pred             ccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEE-------CCeEEEEEEe
Confidence            468899999999999999999998864  2233445668899999999999999999997653       3467799999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+++...... ...+++..+..++.|++.||.|||+  ++++||||||+||+++.++.++|+|||++.......
T Consensus        84 ~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~--~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~  160 (267)
T cd08228          84 ADAGDLSQMIKYFKKQ-KRLIPERTVWKYFVQLCSAVEHMHS--RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT  160 (267)
T ss_pred             cCCCcHHHHHHHhhhc-cCCCCHHHHHHHHHHHHHHHHHHhh--CCeeCCCCCHHHEEEcCCCCEEECccccceeccchh
Confidence            9999999988643210 1248999999999999999999999  889999999999999999999999999998765432


Q ss_pred             C-cceeeccceeeccCccccchhh-hhHhHhCCcccccc
Q 019481          162 A-DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDE  198 (340)
Q Consensus       162 ~-~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~  198 (340)
                      . .....|+..|++|+...+.+.. ..|+|+.|...+.+
T Consensus       161 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el  199 (267)
T cd08228         161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM  199 (267)
T ss_pred             HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHH
Confidence            2 2234577778888643322211 23555544444443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.97  E-value=4.8e-32  Score=242.29  Aligned_cols=188  Identities=14%  Similarity=0.111  Sum_probs=140.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc-hhhHHHHHHHHHHhhhcCCCccccccccccccccc-cCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP-LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICL-TGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~-~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|.+..... ......+.+|++++++++||||+++++++...... .......++++||+
T Consensus        22 ~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~  101 (310)
T cd07865          22 QGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFC  101 (310)
T ss_pred             cCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCC
Confidence            58899999999999999999999865322 22234567899999999999999999976543222 12334568999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      . ++|.+.+.....    .+++.+++.++.||++||+|||+  ++++||||||+||+++.++.+||+|||++........
T Consensus       102 ~-~~l~~~l~~~~~----~~~~~~~~~i~~qi~~al~~lH~--~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~  174 (310)
T cd07865         102 E-HDLAGLLSNKNV----KFTLSEIKKVMKMLLNGLYYIHR--NKILHRDMKAANILITKDGILKLADFGLARAFSLSKN  174 (310)
T ss_pred             C-cCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcc
Confidence            6 589888876543    38999999999999999999999  8899999999999999999999999999986644221


Q ss_pred             c-----ceeeccceeeccCccccchh--hhhHhHhCCccccccc
Q 019481          163 D-----LTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEA  199 (340)
Q Consensus       163 ~-----~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~  199 (340)
                      .     ....++..|++|+...+...  ...|+|+.|...+.+.
T Consensus       175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~  218 (310)
T cd07865         175 SKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMW  218 (310)
T ss_pred             cCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHH
Confidence            1     22345667777763322110  1235555555555443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.97  E-value=4.1e-32  Score=250.23  Aligned_cols=166  Identities=16%  Similarity=0.115  Sum_probs=131.1

Q ss_pred             CCCcceEEEEEEcCC-----CCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeee
Q 019481            4 SAPSFSVLIHVPFPD-----DRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWK   77 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~-----~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~   77 (340)
                      ..|+||.||+|++..     ++..||+|+++........+.+.+|++++++++ ||||+++++++.       +...+++
T Consensus        46 G~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~-------~~~~~~l  118 (400)
T cd05105          46 GSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACT-------KSGPIYI  118 (400)
T ss_pred             cCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc-------cCCceEE
Confidence            368899999998643     234699999976544555677999999999996 999999999775       3346789


Q ss_pred             eeccccCCCHHHHhcccCCC------------------------------------------------------------
Q 019481           78 NKWLMQKKGLENVHIGEHPA------------------------------------------------------------   97 (340)
Q Consensus        78 ~~e~~~~gsL~~~l~~~~~~------------------------------------------------------------   97 (340)
                      +||||++|+|.+++..+...                                                            
T Consensus       119 v~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (400)
T cd05105         119 ITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEAS  198 (400)
T ss_pred             EEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhh
Confidence            99999999999998653210                                                            


Q ss_pred             -------------------------------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCce
Q 019481           98 -------------------------------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKC  146 (340)
Q Consensus        98 -------------------------------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~  146 (340)
                                                     ....+++..+..++.||++||+|||+  ++|+||||||+|||++.++.+
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~--~~ivH~dikp~Nill~~~~~~  276 (400)
T cd05105         199 KYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS--KNCVHRDLAARNVLLAQGKIV  276 (400)
T ss_pred             hhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh--CCeeCCCCChHhEEEeCCCEE
Confidence                                           01247888999999999999999999  889999999999999999999


Q ss_pred             EEeccccceeecccCC---cceeeccceeeccCcc
Q 019481          147 NLSDFSTAKVSAVENA---DLTALDTSSVSAQSGK  178 (340)
Q Consensus       147 kl~DFGla~~~~~~~~---~~~~~gt~~~~~p~~~  178 (340)
                      ||+|||+++.......   .....++..|++|+.+
T Consensus       277 kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~  311 (400)
T cd05105         277 KICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESI  311 (400)
T ss_pred             EEEeCCcceeccccccccccCCcCCCcceEChhhh
Confidence            9999999987644321   1223455668887533

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.97  E-value=5.2e-32  Score=264.37  Aligned_cols=189  Identities=17%  Similarity=0.125  Sum_probs=143.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc--CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI--TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|++...  ......+++.+|++++++++||||+++++++.       +.+..+++|||+
T Consensus        12 kGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~-------d~~~lyLVMEY~   84 (932)
T PRK13184         12 KGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICS-------DGDPVYYTMPYI   84 (932)
T ss_pred             cCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEe-------eCCEEEEEEEcC
Confidence            689999999999999999999999752  22334567899999999999999999999654       344778999999


Q ss_pred             cCCCHHHHhcccCCC------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481           83 QKKGLENVHIGEHPA------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      +||+|.+++......      ....+++..+..++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+++.
T Consensus        85 eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs--~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~  162 (932)
T PRK13184         85 EGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS--KGVLHRDLKPDNILLGLFGEVVILDWGAAIF  162 (932)
T ss_pred             CCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH--CCccccCCchheEEEcCCCCEEEEecCccee
Confidence            999999998743110      01235677889999999999999999  8899999999999999999999999999987


Q ss_pred             ecccC-------------------CcceeeccceeeccCccccchhh-hhHhHhCCcccccccccc
Q 019481          157 SAVEN-------------------ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       157 ~~~~~-------------------~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~  202 (340)
                      .....                   .....+||+.|+||+...+.... ..|+|+.|...+.+.++.
T Consensus       163 i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~  228 (932)
T PRK13184        163 KKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLS  228 (932)
T ss_pred             cccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCC
Confidence            62111                   01124688888888644332221 235565555555544443

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.97  E-value=4.2e-32  Score=245.80  Aligned_cols=188  Identities=14%  Similarity=0.121  Sum_probs=143.6

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|++..+++.||+|.+... ........+.+|+.+++.++||||+++++++....  .......++++||+
T Consensus        14 g~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~--~~~~~~~~lv~e~~   91 (337)
T cd07858          14 GRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPH--REAFNDVYIVYELM   91 (337)
T ss_pred             ccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheeccc--ccccCcEEEEEeCC
Confidence            3588999999999999999999998752 22233456778999999999999999999775432  11223578999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-C
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-N  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~  161 (340)
                      . ++|.+++.....     +++..+..++.|++.||.|||+  ++++||||||+||+++.++.+||+|||+++..... .
T Consensus        92 ~-~~L~~~~~~~~~-----l~~~~~~~i~~qi~~aL~~LH~--~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~  163 (337)
T cd07858          92 D-TDLHQIIRSSQT-----LSDDHCQYFLYQLLRGLKYIHS--ANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGD  163 (337)
T ss_pred             C-CCHHHHHhcCCC-----CCHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHEEEcCCCCEEECcCccccccCCCcc
Confidence            5 699999987655     9999999999999999999999  88999999999999999999999999999876443 2


Q ss_pred             CcceeeccceeeccCccccch--hhhhHhHhCCccccccccc
Q 019481          162 ADLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEK  201 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~  201 (340)
                      ......++..|++|+.+....  -...|+|+.|...+.+..+
T Consensus       164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g  205 (337)
T cd07858         164 FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGR  205 (337)
T ss_pred             cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcC
Confidence            223445677777775433211  1124566655555554433

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.97  E-value=1.1e-31  Score=237.17  Aligned_cols=185  Identities=15%  Similarity=0.154  Sum_probs=142.3

Q ss_pred             CCCcceEEEEEEc----CCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            4 SAPSFSVLIHVPF----PDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         4 ~~G~fg~V~~~~~----~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      +.|+||.||+|+.    ..+++.||+|.++........+.+.+|++++++++||||+++++++..     .+....++++
T Consensus        13 g~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~~~lv~   87 (284)
T cd05079          13 GEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE-----DGGNGIKLIM   87 (284)
T ss_pred             CCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEec-----CCCCceEEEE
Confidence            4688999999974    467889999999755445556779999999999999999999996642     2345678999


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      ||++|++|.+++.+...    .+++..+..++.|++.||+|||+  ++|+||||||+||+++.++.+||+|||+++.+..
T Consensus        88 e~~~g~~L~~~l~~~~~----~~~~~~~~~i~~~i~~aL~~lH~--~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~  161 (284)
T cd05079          88 EFLPSGSLKEYLPRNKN----KINLKQQLKYAVQICKGMDYLGS--RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET  161 (284)
T ss_pred             EccCCCCHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHH--CCeeecccchheEEEcCCCCEEECCCcccccccc
Confidence            99999999999976543    38999999999999999999999  8899999999999999999999999999987654


Q ss_pred             cCCc----ceeeccceeeccCccccchhh-hhHhHhCCccccccc
Q 019481          160 ENAD----LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEA  199 (340)
Q Consensus       160 ~~~~----~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~  199 (340)
                      ....    ....++..|++|+...+..+. ..|+|+.|+..+...
T Consensus       162 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ell  206 (284)
T cd05079         162 DKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELL  206 (284)
T ss_pred             CccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhh
Confidence            3221    123345556777543322111 235666665555543

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.97  E-value=4.5e-32  Score=234.94  Aligned_cols=239  Identities=18%  Similarity=0.088  Sum_probs=167.9

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||++++..+++.+|+|+++...  .......+.+|++++++++||||+++++.|.       +....++++||
T Consensus         2 g~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~~v~e~   74 (250)
T cd05123           2 GKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQ-------TEEKLYLVLEY   74 (250)
T ss_pred             CCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHee-------cCCeeEEEEec
Confidence            36899999999999889999999987532  2234567889999999999999999999654       44578899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-  160 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-  160 (340)
                      +++++|.+++.....     +++..+..++.|+++||.|||+  .+++|+||||+||+++.++.++|+|||++...... 
T Consensus        75 ~~~~~L~~~l~~~~~-----l~~~~~~~~~~qi~~~l~~lh~--~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~  147 (250)
T cd05123          75 APGGELFSHLSKEGR-----FSEERARFYAAEIVLALEYLHS--LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG  147 (250)
T ss_pred             CCCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCceecCCCcceEEEcCCCcEEEeecCcceecccCC
Confidence            999999999987765     8999999999999999999999  77999999999999999999999999999876543 


Q ss_pred             CCcceeeccceeeccCccccchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          161 NADLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      .......++..|++|+...+... ...|+|+.|...+....+.                     .+|............ 
T Consensus       148 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~---------------------~p~~~~~~~~~~~~~-  205 (250)
T cd05123         148 SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGK---------------------PPFYAEDRKEIYEKI-  205 (250)
T ss_pred             CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCC---------------------CCCCCCCHHHHHHHH-
Confidence            22334456777777753322111 1124444333333332222                     222111100000000 


Q ss_pred             hhccccccCcCC---ccccccccccCCCCchHH---HHhhcCcce
Q 019481          240 STITFLSALKIT---GCKSEEGYKNNSSLNPIC---QIVNQHPFY  278 (340)
Q Consensus       240 ~~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~---~~ll~hp~~  278 (340)
                      ...........|   ..+-..|+..||.+||++   +++++|||+
T Consensus       206 ~~~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         206 LKDPLRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             hcCCCCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence            000000011111   223447899999999999   999999996

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.97  E-value=1e-31  Score=237.23  Aligned_cols=187  Identities=16%  Similarity=0.093  Sum_probs=144.4

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|++|.||+|++..+++.||+|.++........+.+.+|++++++++||||++++++|..       .+..++++||++
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~~~~~lv~e~~~   81 (284)
T cd07836           9 GEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHT-------ENKLMLVFEYMD   81 (284)
T ss_pred             ccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEee-------CCcEEEEEecCC
Confidence            4678999999999999999999999764433345667889999999999999999997653       336779999998


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-C
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-A  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~  162 (340)
                      + +|.+++.....  ...+++..+..++.|+++||+|||+  ++++||||||+||++++++.+||+|||+++...... .
T Consensus        82 ~-~l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~--~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~  156 (284)
T cd07836          82 K-DLKKYMDTHGV--RGALDPNTVKSFTYQLLKGIAFCHE--NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNT  156 (284)
T ss_pred             c-cHHHHHHhcCC--CCCcCHHHHHHHHHHHHHHHHHHHH--CCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccc
Confidence            5 89988876542  1348999999999999999999999  789999999999999999999999999997654322 1


Q ss_pred             cceeeccceeeccCccccch--hhhhHhHhCCcccccccccc
Q 019481          163 DLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~  202 (340)
                      .....++..|++|+...+..  -...|+|+.|...+....+.
T Consensus       157 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~  198 (284)
T cd07836         157 FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGR  198 (284)
T ss_pred             cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            22345677788886443211  12346666666665554443

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.97  E-value=1.7e-31  Score=232.02  Aligned_cols=239  Identities=18%  Similarity=0.169  Sum_probs=169.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||++.+..+++.+|+|++.... .....+.+.+|++++++++|||++++.+.+..       ....++++|+++
T Consensus        10 ~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~-------~~~~~lv~e~~~   82 (258)
T cd08215          10 KGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEE-------KGKLCIVMEYAD   82 (258)
T ss_pred             cCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEec-------CCEEEEEEEecC
Confidence            5899999999999999999999997532 23456678899999999999999999996653       347789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-C
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-A  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~  162 (340)
                      +++|.+++..... .+..+++..+..++.|+++||.|||+  ++++|+||+|+||+++.++.+||+|||.+....... .
T Consensus        83 ~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~--~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~  159 (258)
T cd08215          83 GGDLSQKIKKQKK-EGKPFPEEQILDWFVQLCLALKYLHS--RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDL  159 (258)
T ss_pred             CCcHHHHHHHhhc-cCCCcCHHHHHHHHHHHHHHHHHHHh--CCEecccCChHHeEEcCCCcEEECCccceeecccCcce
Confidence            9999999987531 01349999999999999999999999  789999999999999999999999999998765533 2


Q ss_pred             cceeeccceeeccCccccchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      .....|++.|++|+...+... ...|+|+.|...+.+..+.  .|+.....              .....      ....
T Consensus       160 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~--~p~~~~~~--------------~~~~~------~~~~  217 (258)
T cd08215         160 AKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLK--HPFEGENL--------------LELAL------KILK  217 (258)
T ss_pred             ecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCC--CCCCCCcH--------------HHHHH------HHhc
Confidence            334567777888864332211 1234444444433332222  22111110              00000      0000


Q ss_pred             ccccccCcCCcc-------ccccccccCCCCchHHHHhhcCcce
Q 019481          242 ITFLSALKITGC-------KSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       242 ~~~~~~~~~p~~-------~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                         ...+.+|..       +...|+..||++|||+.++++|||+
T Consensus       218 ---~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         218 ---GQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             ---CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence               111122211       2336899999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.97  E-value=8e-32  Score=237.88  Aligned_cols=186  Identities=19%  Similarity=0.129  Sum_probs=145.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc-hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP-LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      +.|++|.||+|.+..+++.||+|++..... ....+.+.+|++++++++||||+++++++.       +..+.++++||+
T Consensus         8 ~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~-------~~~~~~iv~e~~   80 (283)
T cd07835           8 GEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVH-------SENKLYLVFEFL   80 (283)
T ss_pred             cCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheec-------cCCeEEEEEecc
Confidence            467899999999999999999999875332 223356788999999999999999999664       345788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      + ++|.+++.....   ..+++..+..++.|+++||+|||+  ++++||||+|+||+++.++.+||+|||+++.......
T Consensus        81 ~-~~l~~~~~~~~~---~~~~~~~~~~~~~~i~~~L~~lH~--~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~  154 (283)
T cd07835          81 D-LDLKKYMDSSPL---TGLDPPLIKSYLYQLLQGIAYCHS--HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR  154 (283)
T ss_pred             C-cCHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence            5 699999987652   238999999999999999999999  8899999999999999999999999999976543221


Q ss_pred             -cceeeccceeeccCccccch--hhhhHhHhCCcccccccccc
Q 019481          163 -DLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 -~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~  202 (340)
                       .....++..|++|+...+..  -...|+|+.|...+.+.++.
T Consensus       155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~  197 (283)
T cd07835         155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRR  197 (283)
T ss_pred             ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCC
Confidence             12334577788887543321  12357777777666665544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.97  E-value=9e-32  Score=237.14  Aligned_cols=166  Identities=16%  Similarity=0.162  Sum_probs=132.7

Q ss_pred             CCCcceEEEEEEcCC-----CCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPFPD-----DRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~-----~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      ..|+||.||+|++..     +++.||+|.++.....+..+.+.+|++++++++||||+++++++..       ....+++
T Consensus        14 g~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------~~~~~lv   86 (280)
T cd05049          14 GEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTE-------GDPPIMV   86 (280)
T ss_pred             cccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEec-------CCCeEEE
Confidence            358899999998753     4678999999765444456789999999999999999999997653       3467899


Q ss_pred             eccccCCCHHHHhcccCC---------CccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEe
Q 019481           79 KWLMQKKGLENVHIGEHP---------ASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLS  149 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~---------~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~  149 (340)
                      +||+++|+|.+++...+.         .....+++..+..++.|++.||+|||+  ++++||||||+||+++.++.+||+
T Consensus        87 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~--~~i~h~dlkp~nili~~~~~~kl~  164 (280)
T cd05049          87 FEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS--QHFVHRDLATRNCLVGYDLVVKIG  164 (280)
T ss_pred             EecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh--CCeeccccccceEEEcCCCeEEEC
Confidence            999999999999976532         112348899999999999999999999  889999999999999999999999


Q ss_pred             ccccceeecccCC---cceeeccceeeccCcc
Q 019481          150 DFSTAKVSAVENA---DLTALDTSSVSAQSGK  178 (340)
Q Consensus       150 DFGla~~~~~~~~---~~~~~gt~~~~~p~~~  178 (340)
                      |||+++.......   .....++..|+||+.+
T Consensus       165 d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  196 (280)
T cd05049         165 DFGMSRDVYTTDYYRVGGHTMLPIRWMPPESI  196 (280)
T ss_pred             CcccceecccCcceecCCCCcccceecChhhh
Confidence            9999986533221   1222345667777643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=2.8e-32  Score=258.57  Aligned_cols=186  Identities=17%  Similarity=0.117  Sum_probs=130.3

Q ss_pred             CCCcceEEEEEEcCCCC-ceEEEE--------------Eeec--cCchhhHHHHHHHHHHhhhcCCCccccccccccccc
Q 019481            4 SAPSFSVLIHVPFPDDR-DDVMLK--------------LHEL--ITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNI   66 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~-~~vAiK--------------~~~~--~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~   66 (340)
                      ..|+||.||+|..+... +.++.|              .+.+  .........+.+|+++|++++||||+++++++..  
T Consensus       157 G~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--  234 (501)
T PHA03210        157 PAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILKIEEILRS--  234 (501)
T ss_pred             cCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCcEeEEEEE--
Confidence            37999999998764322 222222              1111  1122334568899999999999999999997653  


Q ss_pred             cccCCcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCce
Q 019481           67 CLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKC  146 (340)
Q Consensus        67 ~~~~~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~  146 (340)
                           ....|++++++. ++|.+++...............++.++.||+.||+|||+  ++|+||||||+|||++.++.+
T Consensus       235 -----~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~--~gIiHrDLKP~NILl~~~~~v  306 (501)
T PHA03210        235 -----EANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD--KKLIHRDIKLENIFLNCDGKI  306 (501)
T ss_pred             -----CCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEECCCCCE
Confidence                 336678899885 588887764332111224466788999999999999999  889999999999999999999


Q ss_pred             EEeccccceeecccCC--cceeeccceeeccCccccchhh-hhHhHhCCccccccc
Q 019481          147 NLSDFSTAKVSAVENA--DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEA  199 (340)
Q Consensus       147 kl~DFGla~~~~~~~~--~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~  199 (340)
                      ||+|||+++.+.....  .....||..|++|+.+.+.++. ..|+|+.|+..+.+.
T Consensus       307 kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell  362 (501)
T PHA03210        307 VLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDML  362 (501)
T ss_pred             EEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHH
Confidence            9999999987755332  2345789999999744333221 235555555555443

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.97  E-value=5.6e-32  Score=240.32  Aligned_cols=194  Identities=13%  Similarity=0.058  Sum_probs=142.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc-hhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP-LQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      +.|+||.||+|.+..+++.||+|..+.... ......+.+|+.++++++ ||||+++++.+.....  .+....++++||
T Consensus        10 g~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~--~~~~~~~lv~e~   87 (295)
T cd07837          10 GEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEK--NGKPSLYLVFEY   87 (295)
T ss_pred             cccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCC--CCCceEEEEeec
Confidence            468899999999999999999999875322 223456788999999995 6999999997754321  122347899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC-CCceEEeccccceeeccc
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE-TFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~-~~~~kl~DFGla~~~~~~  160 (340)
                      +++ +|.+++..........+++..++.++.||++||+|||+  ++|+||||||+||+++. ++.+||+|||+++.....
T Consensus        88 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~--~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~  164 (295)
T cd07837          88 LDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK--HGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIP  164 (295)
T ss_pred             cCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH--CCeeecCCChHHEEEecCCCeEEEeecccceecCCC
Confidence            985 89888875433112358999999999999999999999  88999999999999998 899999999999865432


Q ss_pred             C-CcceeeccceeeccCccccch--hhhhHhHhCCcccccccccc
Q 019481          161 N-ADLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       161 ~-~~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~  202 (340)
                      . ......+++.|++|+.+.+..  -...|+|+.|...+.+.++.
T Consensus       165 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~  209 (295)
T cd07837         165 VKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQ  209 (295)
T ss_pred             ccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCC
Confidence            2 122234566777776443211  11346666666665554443

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.97  E-value=6.9e-32  Score=236.78  Aligned_cols=144  Identities=22%  Similarity=0.316  Sum_probs=120.6

Q ss_pred             CCCcceEEEEEEcCCCCc--eEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRD--DVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~--~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.||+|++..++.  .+|+|..+........+.+.+|+++++++ +||||+++++++..       ....+++||
T Consensus         4 g~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-------~~~~~lv~e   76 (270)
T cd05047           4 GEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-------RGYLYLAIE   76 (270)
T ss_pred             CCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEec-------CCCceEEEE
Confidence            468899999999987775  46888886544445566788999999999 79999999997653       335679999


Q ss_pred             cccCCCHHHHhcccCCC-----------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEe
Q 019481           81 LMQKKGLENVHIGEHPA-----------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLS  149 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~  149 (340)
                      |+++|+|.+++......           ....+++..++.++.|++.||+|||+  ++++||||||+||+++.++.+||+
T Consensus        77 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~--~~i~H~dikp~nili~~~~~~kl~  154 (270)
T cd05047          77 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ--KQFIHRDLAARNILVGENYVAKIA  154 (270)
T ss_pred             eCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH--CCEeecccccceEEEcCCCeEEEC
Confidence            99999999999764310           01248899999999999999999999  889999999999999999999999


Q ss_pred             cccccee
Q 019481          150 DFSTAKV  156 (340)
Q Consensus       150 DFGla~~  156 (340)
                      |||+++.
T Consensus       155 dfgl~~~  161 (270)
T cd05047         155 DFGLSRG  161 (270)
T ss_pred             CCCCccc
Confidence            9999864

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.97  E-value=6.9e-32  Score=237.97  Aligned_cols=160  Identities=14%  Similarity=0.114  Sum_probs=127.2

Q ss_pred             CCCcceEEEEEEcCCCCc----eEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            4 SAPSFSVLIHVPFPDDRD----DVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~----~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      ..|+||.||+|++..+++    .+|+|.+..........++..|+.++++++||||+++++++.        ....++++
T Consensus        16 g~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~--------~~~~~~i~   87 (279)
T cd05111          16 GSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP--------GASLQLVT   87 (279)
T ss_pred             CccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC--------CCccEEEE
Confidence            368999999999877766    467777754333344567888999999999999999999542        12456789


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      ||+++|+|.+++.....    .+++..+..++.||+.||+|||+  ++++||||||+|||++.++.+||+|||+++....
T Consensus        88 e~~~~gsL~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~lH~--~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~  161 (279)
T cd05111          88 QLSPLGSLLDHVRQHRD----SLDPQRLLNWCVQIAKGMYYLEE--HRMVHRNLAARNILLKSDSIVQIADFGVADLLYP  161 (279)
T ss_pred             EeCCCCcHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHH--CCEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence            99999999999987543    38999999999999999999999  8899999999999999999999999999987654


Q ss_pred             cCCc---ceeeccceeeccCc
Q 019481          160 ENAD---LTALDTSSVSAQSG  177 (340)
Q Consensus       160 ~~~~---~~~~gt~~~~~p~~  177 (340)
                      ....   ....++..|++|+.
T Consensus       162 ~~~~~~~~~~~~~~~y~~pE~  182 (279)
T cd05111         162 DDKKYFYSEHKTPIKWMALES  182 (279)
T ss_pred             CCcccccCCCCCcccccCHHH
Confidence            3221   12234556777753

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.97  E-value=1.6e-31  Score=235.83  Aligned_cols=161  Identities=17%  Similarity=0.114  Sum_probs=133.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|+...+++.||+|.+.............+|+..+++++ ||||+++++++..       ....++++||+ 
T Consensus         9 ~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~-------~~~~~lv~e~~-   80 (283)
T cd07830           9 DGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRE-------NDELYFVFEYM-   80 (283)
T ss_pred             cCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhc-------CCcEEEEEecC-
Confidence            57899999999999999999999875333233344567999999999 9999999997653       44778999999 


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +|+|.+.+.....   ..+++..+..++.|++.||.|||+  ++++|+||||+||+++.++.++|+|||+++........
T Consensus        81 ~~~l~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~Lh~--~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~  155 (283)
T cd07830          81 EGNLYQLMKDRKG---KPFSESVIRSIIYQILQGLAHIHK--HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPY  155 (283)
T ss_pred             CCCHHHHHHhccc---ccCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCc
Confidence            7899999987652   248999999999999999999999  77999999999999999999999999999877654444


Q ss_pred             ceeeccceeeccCcc
Q 019481          164 LTALDTSSVSAQSGK  178 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~  178 (340)
                      ....++..|++|+.+
T Consensus       156 ~~~~~~~~~~aPE~~  170 (283)
T cd07830         156 TDYVSTRWYRAPEIL  170 (283)
T ss_pred             CCCCCcccccCceee
Confidence            455677778888643

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=8.9e-32  Score=234.30  Aligned_cols=142  Identities=16%  Similarity=0.162  Sum_probs=122.8

Q ss_pred             CCCcceEEEEEEcCCCC---ceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDR---DDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~---~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.||+|++..++   ..+|+|.+.........+.+.+|++++++++||||+++++++..        ...++++|
T Consensus         4 g~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--------~~~~~v~e   75 (257)
T cd05060           4 GHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG--------EPLMLVME   75 (257)
T ss_pred             CccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC--------CceEEEEE
Confidence            35889999999876554   78999999764433456778999999999999999999986532        24679999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      |+++|+|.+++.....     +++..+..++.|++.||+|||+  .+++||||||+|||++.++.+||+|||+++.....
T Consensus        76 ~~~~~~L~~~l~~~~~-----~~~~~~~~~~~qi~~~l~~lh~--~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~  148 (257)
T cd05060          76 LAPLGPLLKYLKKRRE-----IPVSDLKELAHQVAMGMAYLES--KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAG  148 (257)
T ss_pred             eCCCCcHHHHHHhCCC-----CCHHHHHHHHHHHHHHHHHHhh--cCeeccCcccceEEEcCCCcEEeccccccceeecC
Confidence            9999999999987765     8999999999999999999999  77999999999999999999999999999876543

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=9.8e-32  Score=233.18  Aligned_cols=236  Identities=19%  Similarity=0.157  Sum_probs=169.1

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc-hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP-LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .+|++|.||++++..+++.||+|.+..... ....+.+.+|++++++++|||++++++++.       +....++++||+
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-------~~~~~~~v~e~~   81 (254)
T cd06627           9 GRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIE-------TSDSLYIILEYA   81 (254)
T ss_pred             cccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEE-------eCCEEEEEEecC
Confidence            468999999999999999999999976322 245577899999999999999999999664       334788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      ++++|.+++.....     +++..+..++.|++.||.|||+  .+|+||||||+||+++.++.+||+|||++........
T Consensus        82 ~~~~L~~~~~~~~~-----l~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~  154 (254)
T cd06627          82 ENGSLRQIIKKFGP-----FPESLVAVYVYQVLQGLAYLHE--QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK  154 (254)
T ss_pred             CCCcHHHHHHhccC-----CCHHHHHHHHHHHHHHHHHHhh--CCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence            99999999987755     9999999999999999999999  8899999999999999999999999999987765433


Q ss_pred             -cceeeccceeeccCccccchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          163 -DLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       163 -~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                       .....++..|++|+...+... ...|+|+.|...+.+.                     ++..++............  
T Consensus       155 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~---------------------~g~~p~~~~~~~~~~~~~--  211 (254)
T cd06627         155 DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELL---------------------TGNPPYYDLNPMAALFRI--  211 (254)
T ss_pred             cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHH---------------------hCCCCCCCccHHHHHHHH--
Confidence             223456777777753322111 1124444333333332                     222222111111000000  


Q ss_pred             hccccccCcCCc-------cccccccccCCCCchHHHHhhcCcce
Q 019481          241 TITFLSALKITG-------CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~~~~~p~-------~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                        .....+.+|.       .+...||..||++||++.++++|||+
T Consensus       212 --~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         212 --VQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             --hccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence              0111112221       23447799999999999999999996

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.97  E-value=9.9e-32  Score=237.39  Aligned_cols=160  Identities=21%  Similarity=0.166  Sum_probs=129.0

Q ss_pred             CCCcceEEEEEE----cCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            4 SAPSFSVLIHVP----FPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         4 ~~G~fg~V~~~~----~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      ..|+||+||++.    ...+++.||+|.++..........+.+|++++++++||||+++++++..     .+....+++|
T Consensus        13 g~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~~~lv~   87 (283)
T cd05080          13 GEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSE-----QGGKGLQLIM   87 (283)
T ss_pred             ccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-----CCCceEEEEe
Confidence            368999998765    3457788999999754434456678899999999999999999996542     2344678999


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      ||+++|+|.+++....      +++..++.++.|++.||+|||+  ++|+||||||+|||++.++.+||+|||+++....
T Consensus        88 e~~~~~~l~~~~~~~~------l~~~~~~~i~~~l~~~l~~lH~--~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~  159 (283)
T cd05080          88 EYVPLGSLRDYLPKHK------LNLAQLLLFAQQICEGMAYLHS--QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE  159 (283)
T ss_pred             cCCCCCCHHHHHHHcC------CCHHHHHHHHHHHHHHHHHHHH--CCeeccccChheEEEcCCCcEEEeecccccccCC
Confidence            9999999999997632      8999999999999999999999  8899999999999999999999999999987654


Q ss_pred             cCCc----ceeeccceeeccC
Q 019481          160 ENAD----LTALDTSSVSAQS  176 (340)
Q Consensus       160 ~~~~----~~~~gt~~~~~p~  176 (340)
                      ....    ....++..|++|+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~PE  180 (283)
T cd05080         160 GHEYYRVREDGDSPVFWYAVE  180 (283)
T ss_pred             cchhhccCCCCCCCceeeCHh
Confidence            3211    1123445567775

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.97  E-value=4.5e-32  Score=244.89  Aligned_cols=189  Identities=18%  Similarity=0.128  Sum_probs=147.9

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc-hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP-LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      +.|+||.||+|++..+++.||+|.+..... ....+.+.+|+++++.++||||+++++++.....  .+....++++||+
T Consensus         9 g~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~~~~~~lv~e~~   86 (330)
T cd07834           9 GSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSP--EDFNDVYIVTELM   86 (330)
T ss_pred             cCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCc--ccccceEEEecch
Confidence            468999999999999999999999875322 3445678999999999999999999997754321  2234678999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-  161 (340)
                      + ++|.+++.....     +++..+..++.||+.||+|||+  ++|+||||||+||+++.++.++|+|||++....... 
T Consensus        87 ~-~~l~~~l~~~~~-----l~~~~~~~i~~~l~~~l~~LH~--~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~  158 (330)
T cd07834          87 E-TDLHKVIKSPQP-----LTDDHIQYFLYQILRGLKYLHS--ANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDED  158 (330)
T ss_pred             h-hhHHHHHhCCCC-----CCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCCEEEcccCceEeeccccc
Confidence            7 589999987655     9999999999999999999999  889999999999999999999999999998776543 


Q ss_pred             ---CcceeeccceeeccCccccc-hh-hhhHhHhCCcccccccccc
Q 019481          162 ---ADLTALDTSSVSAQSGKTGM-EM-KMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       162 ---~~~~~~gt~~~~~p~~~~~~-~~-~~~~~~s~g~~~~~~~~~~  202 (340)
                         ......++..|++|+.+.+. .. ...|+|+.|...+.+.++.
T Consensus       159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~  204 (330)
T cd07834         159 EKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRK  204 (330)
T ss_pred             ccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCC
Confidence               12344577788888654432 11 1246666666555554443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.97  E-value=7.7e-32  Score=239.80  Aligned_cols=186  Identities=18%  Similarity=0.191  Sum_probs=135.0

Q ss_pred             CCCcceEEEEEEcCCCCc--eEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRD--DVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~--~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.||+|++..++.  .+|+|.++........+.+.+|+++++++ +||||+++++++..       ....++++|
T Consensus        11 g~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-------~~~~~lv~e   83 (297)
T cd05089          11 GEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACEN-------RGYLYIAIE   83 (297)
T ss_pred             cCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc-------CCcceEEEE
Confidence            468999999999877664  46888886433445567789999999999 79999999996643       336779999


Q ss_pred             cccCCCHHHHhcccCCC-----------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEe
Q 019481           81 LMQKKGLENVHIGEHPA-----------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLS  149 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~  149 (340)
                      |+++|+|.+++......           ....+++..++.++.|++.||+|||+  ++|+||||||+|||++.++.+||+
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~--~~ivH~dlkp~Nill~~~~~~kl~  161 (297)
T cd05089          84 YAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE--KQFIHRDLAARNVLVGENLASKIA  161 (297)
T ss_pred             ecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH--CCcccCcCCcceEEECCCCeEEEC
Confidence            99999999999764310           01248899999999999999999999  889999999999999999999999


Q ss_pred             ccccceeecccCCcceeeccceeeccCccccchh-hhhHhHhCCcccccc
Q 019481          150 DFSTAKVSAVENADLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDE  198 (340)
Q Consensus       150 DFGla~~~~~~~~~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~  198 (340)
                      |||++..............+..|++|+...+..+ ...|+|+.|...+.+
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el  211 (297)
T cd05089         162 DFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEI  211 (297)
T ss_pred             CcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHH
Confidence            9999864322111111122334677653322111 123455544444433

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.97  E-value=7.8e-32  Score=239.32  Aligned_cols=241  Identities=20%  Similarity=0.119  Sum_probs=167.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      +|+||.||++.+..+++.||+|.++... ....+.+.+|+.++++++||||++++++|.       +....++++||+++
T Consensus        29 ~g~~g~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-------~~~~~~lv~e~~~~  100 (293)
T cd06647          29 QGASGTVYTAIDVATGQEVAIKQMNLQQ-QPKKELIINEILVMRENKHPNIVNYLDSYL-------VGDELWVVMEYLAG  100 (293)
T ss_pred             CCCCeEEEEEEEcCCCCEEEEEEecccc-chHHHHHHHHHHHHhhcCCCCeeehhheee-------eCCcEEEEEecCCC
Confidence            6889999999998889999999986432 233466889999999999999999999765       33467899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC-c
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA-D  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~-~  163 (340)
                      ++|.+++.+..      +++..+..++.|++.||.|||+  ++++||||||+||+++.++.+||+|||++........ .
T Consensus       101 ~~L~~~~~~~~------l~~~~~~~i~~~l~~al~~LH~--~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~  172 (293)
T cd06647         101 GSLTDVVTETC------MDEGQIAAVCRECLQALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR  172 (293)
T ss_pred             CcHHHHHhhcC------CCHHHHHHHHHHHHHHHHHHHh--CCEeeccCCHHHEEEcCCCCEEEccCcceeccccccccc
Confidence            99999997643      7899999999999999999999  8899999999999999999999999999876654332 2


Q ss_pred             ceeeccceeeccCccccchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCcc-CCchhHHHHHHHHHHHHhhhh
Q 019481          164 LTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLK-TENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      ....|++.|++|+.+..... ...|+|+.|...+....+.  .||...........+. .+.+.+......         
T Consensus       173 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~--~pf~~~~~~~~~~~~~~~~~~~~~~~~~~---------  241 (293)
T cd06647         173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE--PPYLNENPLRALYLIATNGTPELQNPEKL---------  241 (293)
T ss_pred             ccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCC--CCCCCCChhhheeehhcCCCCCCCCcccc---------
Confidence            23457777888864322111 1234555444444443333  2222211111111111 011111000000         


Q ss_pred             ccccccCcCCccccccccccCCCCchHHHHhhcCcce
Q 019481          242 ITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       242 ~~~~~~~~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                            +....++...|+..||.+||++++++.|||+
T Consensus       242 ------~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~  272 (293)
T cd06647         242 ------SAIFRDFLNRCLEMDVEKRGSAKELLQHPFL  272 (293)
T ss_pred             ------CHHHHHHHHHHccCChhhCcCHHHHhcCHHH
Confidence                  0001233457899999999999999999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.97  E-value=7.8e-32  Score=238.04  Aligned_cols=165  Identities=18%  Similarity=0.185  Sum_probs=130.3

Q ss_pred             CCCcceEEEEEEc----CCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            4 SAPSFSVLIHVPF----PDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         4 ~~G~fg~V~~~~~----~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      ..|+||.||+|+.    ..+++.||+|.+...........+.+|++++++++||||+++++++.       +....++++
T Consensus        14 g~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-------~~~~~~lv~   86 (283)
T cd05090          14 GECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVT-------QEQPVCMLF   86 (283)
T ss_pred             cccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEe-------cCCceEEEE
Confidence            3689999999985    34567899999975444455577899999999999999999999654       334678999


Q ss_pred             ccccCCCHHHHhcccCCC------------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceE
Q 019481           80 WLMQKKGLENVHIGEHPA------------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCN  147 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~------------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~k  147 (340)
                      ||+++|+|.+++......            ....+++..+..++.|++.||+|||+  ++|+||||||+|||++.++.+|
T Consensus        87 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~--~~i~H~dlkp~nili~~~~~~k  164 (283)
T cd05090          87 EYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS--HFFVHKDLAARNILIGEQLHVK  164 (283)
T ss_pred             EcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh--cCeehhccccceEEEcCCCcEE
Confidence            999999999998643210            01247899999999999999999999  8899999999999999999999


Q ss_pred             EeccccceeecccCC---cceeeccceeeccCc
Q 019481          148 LSDFSTAKVSAVENA---DLTALDTSSVSAQSG  177 (340)
Q Consensus       148 l~DFGla~~~~~~~~---~~~~~gt~~~~~p~~  177 (340)
                      |+|||+++.......   .....++..|++|+.
T Consensus       165 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  197 (283)
T cd05090         165 ISDLGLSREIYSADYYRVQPKSLLPIRWMPPEA  197 (283)
T ss_pred             eccccccccccCCcceecccCCCccceecChHH
Confidence            999999986543221   222334555777753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.97  E-value=8.5e-32  Score=235.20  Aligned_cols=179  Identities=17%  Similarity=0.156  Sum_probs=134.1

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|++..++ .||+|+++...  ...+.+.+|++++++++||||+++++.+.        ....++++||++
T Consensus        15 g~g~~~~v~~~~~~~~~-~valK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~--------~~~~~lv~e~~~   83 (262)
T cd05071          15 GQGCFGEVWMGTWNGTT-RVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVS--------EEPIYIVTEYMS   83 (262)
T ss_pred             CCCCCCcEEEEEecCCc-eEEEEecccCc--cCHHHHHHHHHHHHhCCCCCcceEEEEEC--------CCCcEEEEEcCC
Confidence            46889999999987654 59999997422  23456889999999999999999998543        225679999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +|+|.+++.....   ..+++..+..++.|+++||+|||+  ++|+||||||+||+++.++.+||+|||.++.+......
T Consensus        84 ~~~L~~~~~~~~~---~~~~~~~~~~~~~~l~~aL~~lH~--~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~  158 (262)
T cd05071          84 KGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVER--MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT  158 (262)
T ss_pred             CCcHHHHHhhccc---cCCCHHHHHHHHHHHHHHHHHHHH--CCccccccCcccEEEcCCCcEEeccCCceeeccccccc
Confidence            9999999986432   248999999999999999999999  88999999999999999999999999999876543221


Q ss_pred             c--eeeccceeeccCccccchhh-hhHhHhCCcccccc
Q 019481          164 L--TALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDE  198 (340)
Q Consensus       164 ~--~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~  198 (340)
                      .  ...++..|++|+.....++. ..|+|+.|...+..
T Consensus       159 ~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~el  196 (262)
T cd05071         159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL  196 (262)
T ss_pred             cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHH
Confidence            1  12344557777533211111 23555544444443

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.97  E-value=1.7e-31  Score=233.68  Aligned_cols=164  Identities=18%  Similarity=0.202  Sum_probs=134.1

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc--CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI--TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|++..+++.+|+|.+...  ......+.+.+|+++++.++||||++++++|.       +....++++||
T Consensus        11 g~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-------~~~~~~~v~e~   83 (267)
T cd08229          11 GRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI-------EDNELNIVLEL   83 (267)
T ss_pred             cccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeE-------eCCeEEEEEEe
Confidence            4688999999999999999999988642  22334567889999999999999999999765       33477899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++++|.+++..... ....+++..+..++.||+.||.|||+  ++++|+||||+||+++.++.++|+|||++.......
T Consensus        84 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~--~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd08229          84 ADAGDLSRMIKHFKK-QKRLIPEKTVWKYFVQLCSALEHMHS--RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT  160 (267)
T ss_pred             cCCCCHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC
Confidence            999999999874221 01348999999999999999999999  889999999999999999999999999988765432


Q ss_pred             C-cceeeccceeeccCc
Q 019481          162 A-DLTALDTSSVSAQSG  177 (340)
Q Consensus       162 ~-~~~~~gt~~~~~p~~  177 (340)
                      . .....|+..|++|+.
T Consensus       161 ~~~~~~~~~~~~~ape~  177 (267)
T cd08229         161 TAAHSLVGTPYYMSPER  177 (267)
T ss_pred             cccccccCCcCccCHHH
Confidence            2 223467777888853

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.97  E-value=7.5e-32  Score=237.40  Aligned_cols=239  Identities=17%  Similarity=0.123  Sum_probs=168.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc--CchhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI--TPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.||+|++..+++.||+|+++..  ......+.+.+|.+++++++ ||||++++++|.       +....+++||
T Consensus        10 g~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~-------~~~~~~lv~e   82 (280)
T cd05581          10 GEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQ-------DEENLYFVLE   82 (280)
T ss_pred             cCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhc-------CCceEEEEEc
Confidence            4688999999999999999999999752  12334567889999999999 999999999664       3346779999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      ++++++|.+++.+...     +++..+..++.|++.||.|||+  .+++|+||||+||+++.+++++|+|||++......
T Consensus        83 ~~~~~~L~~~l~~~~~-----l~~~~~~~i~~ql~~~l~~Lh~--~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~  155 (280)
T cd05581          83 YAPNGELLQYIRKYGS-----LDEKCTRFYAAEILLALEYLHS--KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPN  155 (280)
T ss_pred             CCCCCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence            9999999999988765     9999999999999999999999  77999999999999999999999999999865442


Q ss_pred             CC---------------------cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCC
Q 019481          161 NA---------------------DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPN  218 (340)
Q Consensus       161 ~~---------------------~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (340)
                      ..                     .....|+..|++|+...+.... ..|+|+                     +|++..+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~s---------------------lG~~l~~  214 (280)
T cd05581         156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWA---------------------LGCIIYQ  214 (280)
T ss_pred             cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHH---------------------HHHHHHH
Confidence            21                     1122345555555422211111 123443                     3333333


Q ss_pred             ccCCchhHHHHHHHHHHHHhhhhccccccCcCCc---cccccccccCCCCchHH----HHhhcCcce
Q 019481          219 LKTENETWNNFLYLLLIATLLSTITFLSALKITG---CKSEEGYKNNSSLNPIC----QIVNQHPFY  278 (340)
Q Consensus       219 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~~~~~~l~~dP~~R~t~----~~ll~hp~~  278 (340)
                      +.++..+|.......... .+........+.++.   .+-+.|++.||++||++    +++++|||+
T Consensus       215 l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         215 MLTGKPPFRGSNEYLTFQ-KILKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             HHhCCCCCCCccHHHHHH-HHHhcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence            333333333221111111 111111111222222   23447899999999999    999999996

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.97  E-value=6.3e-32  Score=237.90  Aligned_cols=186  Identities=14%  Similarity=0.119  Sum_probs=137.4

Q ss_pred             CCCcceEEEEEEcC-----CCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPFP-----DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      +.|+||.||+|.+.     .+++.||+|.+...........+.+|+.+++.++||||+++++++.       +....+++
T Consensus        15 g~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~-------~~~~~~lv   87 (277)
T cd05062          15 GQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS-------QGQPTLVI   87 (277)
T ss_pred             ccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc-------CCCCeEEE
Confidence            46889999999864     2456799999865444445567889999999999999999999654       33467799


Q ss_pred             eccccCCCHHHHhcccCCC-----ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccc
Q 019481           79 KWLMQKKGLENVHIGEHPA-----SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFST  153 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl  153 (340)
                      +||+++|+|.+++......     ....+++..+..++.|+++||+|||+  ++++||||||+||+++.++.+||+|||+
T Consensus        88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~--~~~vH~dlkp~Nil~~~~~~~~l~dfg~  165 (277)
T cd05062          88 MELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGM  165 (277)
T ss_pred             EecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCcchheEEEcCCCCEEECCCCC
Confidence            9999999999999764321     01236788899999999999999999  7899999999999999999999999999


Q ss_pred             ceeecccCC---cceeeccceeeccCccccchh-hhhHhHhCCcccccc
Q 019481          154 AKVSAVENA---DLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDE  198 (340)
Q Consensus       154 a~~~~~~~~---~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~  198 (340)
                      ++.......   .....++..|++|+.+.+..+ ...|+|+.|...+.+
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el  214 (277)
T cd05062         166 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI  214 (277)
T ss_pred             ccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHH
Confidence            976543221   111234566777764332111 123566655555444

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.97  E-value=1.6e-31  Score=234.52  Aligned_cols=153  Identities=16%  Similarity=0.151  Sum_probs=123.5

Q ss_pred             CCCcceEEEEEEcCC---CCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            4 SAPSFSVLIHVPFPD---DRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~---~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      ..|+||.||+|+...   +++.||+|+++.. ........+.+|++.++.++||||+++++++..... ..+....++++
T Consensus         8 g~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~-~~~~~~~~~v~   86 (273)
T cd05035           8 GEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASS-LQKIPKPMVIL   86 (273)
T ss_pred             CcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCc-cccCcccEEEE
Confidence            468999999998765   3478999998753 233445678999999999999999999986643321 12233578999


Q ss_pred             ccccCCCHHHHhcccCCC-ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec
Q 019481           80 WLMQKKGLENVHIGEHPA-SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      ||+++|+|.+++...... ....+++..+..++.|++.||.|||+  ++|+||||||+||++++++.+||+|||+++...
T Consensus        87 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  164 (273)
T cd05035          87 PFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN--RNFIHRDLAARNCMLREDMTVCVADFGLSKKIY  164 (273)
T ss_pred             eccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh--CCeeccccchheEEECCCCeEEECCccceeecc
Confidence            999999999998553211 11348999999999999999999999  889999999999999999999999999998765


Q ss_pred             c
Q 019481          159 V  159 (340)
Q Consensus       159 ~  159 (340)
                      .
T Consensus       165 ~  165 (273)
T cd05035         165 S  165 (273)
T ss_pred             c
Confidence            4

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.97  E-value=3e-31  Score=230.49  Aligned_cols=239  Identities=20%  Similarity=0.146  Sum_probs=170.9

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      +.|++|.||+|++..+++.|++|+++... .....+.+.+|++++++++||||+++++.+...     .....++++||+
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~~~lv~e~~   83 (260)
T cd06606           9 GRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDE-----EKNTLNIFLEYV   83 (260)
T ss_pred             eecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecC-----CCCeEEEEEEec
Confidence            36899999999999999999999997532 234567789999999999999999999965432     125788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      ++++|.+++.....     +++..+..++.|++.||+|||+  .+++|+||+|+||+++.++.+||+|||.+........
T Consensus        84 ~~~~L~~~~~~~~~-----~~~~~~~~~~~~l~~~l~~lh~--~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~  156 (260)
T cd06606          84 SGGSLSSLLKKFGK-----LPEPVIRKYTRQILEGLAYLHS--NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIET  156 (260)
T ss_pred             CCCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEEcCCCCEEEcccccEEecccccc
Confidence            99999999987765     9999999999999999999999  7899999999999999999999999999987766543


Q ss_pred             ---cceeeccceeeccCccccchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHh
Q 019481          163 ---DLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATL  238 (340)
Q Consensus       163 ---~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (340)
                         .....++..|.+|+...+... ...|+|+.|...+....+..+|.  ....                ....      
T Consensus       157 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~--~~~~----------------~~~~------  212 (260)
T cd06606         157 GEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWS--ELGN----------------PMAA------  212 (260)
T ss_pred             cccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC--CCCc----------------hHHH------
Confidence               344567777877754332211 12244444444433333221121  1100                0000      


Q ss_pred             hhhcc-ccccCcCCcc-------ccccccccCCCCchHHHHhhcCcce
Q 019481          239 LSTIT-FLSALKITGC-------KSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       239 ~~~~~-~~~~~~~p~~-------~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ...+. ....+.+|..       +...|++.||++||+++++++|||+
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         213 LYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             HHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence            00000 0111222222       2336799999999999999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.97  E-value=1.9e-31  Score=237.16  Aligned_cols=251  Identities=18%  Similarity=0.141  Sum_probs=167.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|.+..+++.||+|.++..........+.+|+.++.+.. ||||+++++++..       ....++++||+
T Consensus        24 g~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-------~~~~~~v~e~~   96 (296)
T cd06618          24 GSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFIT-------DSDVFICMELM   96 (296)
T ss_pred             eccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeec-------CCeEEEEeecc
Confidence            468999999999999899999999976443344556677887777775 9999999997653       34678999998


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      + ++|.+++.....    .+++..+..++.|+++||+|||+. ++|+||||||+||+++.++.+||+|||++..+.....
T Consensus        97 ~-~~l~~l~~~~~~----~l~~~~~~~i~~~i~~~l~~lH~~-~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~  170 (296)
T cd06618          97 S-TCLDKLLKRIQG----PIPEDILGKMTVAIVKALHYLKEK-HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA  170 (296)
T ss_pred             C-cCHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhh-CCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc
Confidence            5 588877766432    389999999999999999999971 3699999999999999999999999999987654433


Q ss_pred             cceeeccceeeccCccccch-----hhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHH-HHH
Q 019481          163 DLTALDTSSVSAQSGKTGME-----MKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLL-LIA  236 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~-----~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~  236 (340)
                      .....++..|++|+.+.+..     -...|+|+.|...+.                     +.+|..||....... ...
T Consensus       171 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~e---------------------l~~g~~p~~~~~~~~~~~~  229 (296)
T cd06618         171 KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVE---------------------LATGQFPYKNCKTEFEVLT  229 (296)
T ss_pred             ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHH---------------------HHhCCCCCCcchhHHHHHH
Confidence            33344666777775443221     112344444433333                     333333332111000 000


Q ss_pred             Hhhhhc--cccccCcCC---ccccccccccCCCCchHHHHhhcCcceeeeehhhHHH
Q 019481          237 TLLSTI--TFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYIRLVTTFNSV  288 (340)
Q Consensus       237 ~~~~~~--~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~~~~~~~~~~  288 (340)
                      ......  ........+   ..+...|+..||.+||++++++.|||+.+.......+
T Consensus       230 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~~~  286 (296)
T cd06618         230 KILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYETAEVDV  286 (296)
T ss_pred             HHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccchhHHHH
Confidence            000000  000000111   1234478999999999999999999995545444444

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=2.3e-32  Score=248.02  Aligned_cols=236  Identities=17%  Similarity=0.101  Sum_probs=172.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCch--hhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPL--QLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      -|+||.|.++...+|...||+|.+++.+..  .....++.|-+||..-+++=||+||..|+       |++.+|+||||+
T Consensus       639 vGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQ-------DkdnLYFVMdYI  711 (1034)
T KOG0608|consen  639 VGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQ-------DKDNLYFVMDYI  711 (1034)
T ss_pred             ccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEec-------cCCceEEEEecc
Confidence            489999999999999999999999863322  22345788999999999999999999887       445778999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceee-----
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVS-----  157 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~-----  157 (340)
                      +||++..+|-+.+-     |+|+.++.|+.++.+|+++.|.  -|+|||||||+|||||.+|++||+||||+.-+     
T Consensus       712 PGGDmMSLLIrmgI-----FeE~LARFYIAEltcAiesVHk--mGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHd  784 (1034)
T KOG0608|consen  712 PGGDMMSLLIRMGI-----FEEDLARFYIAELTCAIESVHK--MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD  784 (1034)
T ss_pred             CCccHHHHHHHhcc-----CHHHHHHHHHHHHHHHHHHHHh--ccceecccCccceEEccCCceeeeeccccccceeccc
Confidence            99999999998877     9999999999999999999999  55999999999999999999999999998532     


Q ss_pred             ----cccC----------------------------------CcceeeccceeeccCccccchhh-hhHhHhCCcccccc
Q 019481          158 ----AVEN----------------------------------ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDE  198 (340)
Q Consensus       158 ----~~~~----------------------------------~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~  198 (340)
                          ..++                                  .....+||+.|+||+...-+|+. +.|.|+.|+..+++
T Consensus       785 skYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em  864 (1034)
T KOG0608|consen  785 SKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEM  864 (1034)
T ss_pred             cccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHH
Confidence                1110                                  00123799999999654444433 23555555555444


Q ss_pred             ccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhccccccCcCC--ccccccc------cccCCCCchH--
Q 019481          199 AEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTITFLSALKIT--GCKSEEG------YKNNSSLNPI--  268 (340)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~------l~~dP~~R~t--  268 (340)
                      ..+.  .||-...-+.+...++                      ++.....+|  ..+|++|      |..+++.|.-  
T Consensus       865 ~~g~--~pf~~~tp~~tq~kv~----------------------nw~~~l~~~~~~~ls~e~~~li~kLc~sad~RLGkn  920 (1034)
T KOG0608|consen  865 LVGQ--PPFLADTPGETQYKVI----------------------NWRNFLHIPYQGNLSKEALDLIQKLCCSADSRLGKN  920 (1034)
T ss_pred             hhCC--CCccCCCCCcceeeee----------------------ehhhccccccccccCHHHHHHHHHHhcChhhhhccc
Confidence            4333  4544444443333322                      222222222  2244444      5677888875  


Q ss_pred             -HHHhhcCcce
Q 019481          269 -CQIVNQHPFY  278 (340)
Q Consensus       269 -~~~ll~hp~~  278 (340)
                       ++++..||||
T Consensus       921 g~d~vKaHpfF  931 (1034)
T KOG0608|consen  921 GADQVKAHPFF  931 (1034)
T ss_pred             chhhhhcCccc
Confidence             6789999999

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.97  E-value=1.2e-31  Score=236.06  Aligned_cols=164  Identities=16%  Similarity=0.151  Sum_probs=130.2

Q ss_pred             CCCcceEEEEEEcCCC-----CceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPFPDD-----RDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~-----~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      ..|+||.||+|.+...     ++.||+|.+...........+.+|+++++.++||||+++++++..       ....+++
T Consensus        15 g~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-------~~~~~~v   87 (277)
T cd05032          15 GQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVST-------GQPTLVV   87 (277)
T ss_pred             cCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC-------CCCcEEE
Confidence            3689999999998644     378999998754444555678899999999999999999997653       3467799


Q ss_pred             eccccCCCHHHHhcccCCC-----ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccc
Q 019481           79 KWLMQKKGLENVHIGEHPA-----SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFST  153 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl  153 (340)
                      +||+++|+|.+++......     ....+++..+..++.|++.||.|||+  ++|+||||||+||+++.++.+||+|||+
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~di~p~nill~~~~~~kl~dfg~  165 (277)
T cd05032          88 MELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA--KKFVHRDLAARNCMVAEDLTVKIGDFGM  165 (277)
T ss_pred             EecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh--CCccccccChheEEEcCCCCEEECCccc
Confidence            9999999999999754321     01237888999999999999999999  8899999999999999999999999999


Q ss_pred             ceeecccC---CcceeeccceeeccC
Q 019481          154 AKVSAVEN---ADLTALDTSSVSAQS  176 (340)
Q Consensus       154 a~~~~~~~---~~~~~~gt~~~~~p~  176 (340)
                      ++.+....   ......++..|++|+
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~y~aPE  191 (277)
T cd05032         166 TRDIYETDYYRKGGKGLLPVRWMAPE  191 (277)
T ss_pred             chhhccCcccccCCCCCccccccCHH
Confidence            98654432   112233455666664

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.97  E-value=1.5e-31  Score=234.15  Aligned_cols=143  Identities=18%  Similarity=0.222  Sum_probs=123.1

Q ss_pred             CCCcceEEEEEEcCCCCc---eEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRD---DVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~---~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      +.|+||.||+|++..++.   .+|+|.++........+.+.+|+.++++++||||+++++++.       +.++.++++|
T Consensus        13 g~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e   85 (267)
T cd05066          13 GAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT-------KSKPVMIVTE   85 (267)
T ss_pred             cccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-------cCCccEEEEE
Confidence            468899999999865443   799999875444445677899999999999999999999664       3346789999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      |+++|+|.+++.....    .+++.++..++.|++.||+|||+  ++++||||||+|||++.++.+||+|||+++....
T Consensus        86 ~~~~~~L~~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lH~--~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~  158 (267)
T cd05066          86 YMENGSLDAFLRKHDG----QFTVIQLVGMLRGIASGMKYLSD--MGYVHRDLAARNILVNSNLVCKVSDFGLSRVLED  158 (267)
T ss_pred             cCCCCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHH--CCEeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence            9999999999987643    38999999999999999999999  8899999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.97  E-value=1.6e-31  Score=237.24  Aligned_cols=147  Identities=17%  Similarity=0.200  Sum_probs=122.9

Q ss_pred             CCCcceEEEEEEcCCC-----CceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeee
Q 019481            4 SAPSFSVLIHVPFPDD-----RDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWK   77 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~-----~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~   77 (340)
                      ..|+||.||++.....     ...+|+|.+......+....+.+|+++++++ +||||+++++++..       ....++
T Consensus        21 g~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-------~~~~~l   93 (293)
T cd05053          21 GEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ-------EGPLYV   93 (293)
T ss_pred             cccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC-------CCCeEE
Confidence            3688999999987643     3789999997644445556788999999999 79999999996643       336789


Q ss_pred             eeccccCCCHHHHhcccCC-----------CccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCce
Q 019481           78 NKWLMQKKGLENVHIGEHP-----------ASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKC  146 (340)
Q Consensus        78 ~~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~  146 (340)
                      ++||+++|+|.+++.....           .....+++..+..++.|++.||+|||+  ++|+||||||+||+++.++.+
T Consensus        94 i~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~--~~ivH~dlkp~Nil~~~~~~~  171 (293)
T cd05053          94 VVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS--KKCIHRDLAARNVLVTEDHVM  171 (293)
T ss_pred             EEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH--CCccccccceeeEEEcCCCeE
Confidence            9999999999999975321           012358999999999999999999999  889999999999999999999


Q ss_pred             EEeccccceeecc
Q 019481          147 NLSDFSTAKVSAV  159 (340)
Q Consensus       147 kl~DFGla~~~~~  159 (340)
                      ||+|||+++.+..
T Consensus       172 kL~Dfg~~~~~~~  184 (293)
T cd05053         172 KIADFGLARDIHH  184 (293)
T ss_pred             EeCcccccccccc
Confidence            9999999987654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.97  E-value=1.3e-31  Score=246.72  Aligned_cols=185  Identities=14%  Similarity=0.098  Sum_probs=138.0

Q ss_pred             CCCcceEEEEEEc-----CCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeee
Q 019481            4 SAPSFSVLIHVPF-----PDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWK   77 (340)
Q Consensus         4 ~~G~fg~V~~~~~-----~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~   77 (340)
                      ..|+||.||+|++     ..+++.||+|+++........+.+.+|+++|.+++ ||||+++++++..       ....++
T Consensus        46 G~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~-------~~~~~i  118 (401)
T cd05107          46 GSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTK-------GGPIYI  118 (401)
T ss_pred             cCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc-------CCCcEE
Confidence            3689999999985     34567899999986444444567889999999998 9999999997653       335779


Q ss_pred             eeccccCCCHHHHhcccCCC------------------------------------------------------------
Q 019481           78 NKWLMQKKGLENVHIGEHPA------------------------------------------------------------   97 (340)
Q Consensus        78 ~~e~~~~gsL~~~l~~~~~~------------------------------------------------------------   97 (340)
                      ++||+++|+|.++++.....                                                            
T Consensus       119 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (401)
T cd05107         119 ITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGT  198 (401)
T ss_pred             EEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhh
Confidence            99999999999999754210                                                            


Q ss_pred             ---------------------------------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC
Q 019481           98 ---------------------------------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF  144 (340)
Q Consensus        98 ---------------------------------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~  144 (340)
                                                       ....+++..+..++.||+.||+|||+  ++|+||||||+|||++.++
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~--~~ivHrdlkp~NiLl~~~~  276 (401)
T cd05107         199 VKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS--KNCVHRDLAARNVLICEGK  276 (401)
T ss_pred             hhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc--CCcCcccCCcceEEEeCCC
Confidence                                             01236778889999999999999999  8899999999999999999


Q ss_pred             ceEEeccccceeecccCC---cceeeccceeeccCccccchhh-hhHhHhCCccccc
Q 019481          145 KCNLSDFSTAKVSAVENA---DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHD  197 (340)
Q Consensus       145 ~~kl~DFGla~~~~~~~~---~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~  197 (340)
                      .+||+|||+++.......   .....++..|++|+...+.... ..|+|+.|...++
T Consensus       277 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e  333 (401)
T cd05107         277 LVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWE  333 (401)
T ss_pred             EEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHH
Confidence            999999999986543221   1223456778888643322111 2355554444443

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.97  E-value=4.7e-32  Score=239.78  Aligned_cols=238  Identities=16%  Similarity=0.140  Sum_probs=165.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|++|.||++.+..+++.+|+|.++... ....+.+.+|+.+++.++||||++++++|.       ..++.++++||+++
T Consensus        29 ~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~-------~~~~~~~v~e~~~~  100 (285)
T cd06648          29 EGSTGIVCIATDKSTGRQVAVKKMDLRK-QQRRELLFNEVVIMRDYQHPNIVEMYSSYL-------VGDELWVVMEFLEG  100 (285)
T ss_pred             cCCCeEEEEEEECCCCCEEEEEEEeccc-hhHHHHHHHHHHHHHHcCCCChheEEEEEE-------cCCeEEEEEeccCC
Confidence            5889999999999999999999986432 334456889999999999999999999765       33467899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-Cc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-AD  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~~  163 (340)
                      ++|.+++.. ..     +++..+..++.|++.||+|||+  ++|+||||||+||+++.++.+||+|||.+....... ..
T Consensus       101 ~~L~~~~~~-~~-----~~~~~~~~~~~ql~~~l~~lH~--~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~  172 (285)
T cd06648         101 GALTDIVTH-TR-----MNEEQIATVCLAVLKALSFLHA--QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRR  172 (285)
T ss_pred             CCHHHHHHh-CC-----CCHHHHHHHHHHHHHHHHHHHh--CCeecCCCChhhEEEcCCCcEEEcccccchhhccCCccc
Confidence            999999987 33     8999999999999999999999  789999999999999999999999999887554322 12


Q ss_pred             ceeeccceeeccCccccchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh-
Q 019481          164 LTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST-  241 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-  241 (340)
                      ....|+..|++|+...+... ...|+|+.|...+                     ++.+|..+|............... 
T Consensus       173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~---------------------ell~g~~p~~~~~~~~~~~~~~~~~  231 (285)
T cd06648         173 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVI---------------------EMVDGEPPYFNEPPLQAMKRIRDNL  231 (285)
T ss_pred             ccccCCccccCHHHhcCCCCCCcccHHHHHHHHH---------------------HHHhCCCCCcCCCHHHHHHHHHhcC
Confidence            23457777888753322111 1123333333333                     333333222111100000000000 


Q ss_pred             -ccccccCcCCc---cccccccccCCCCchHHHHhhcCccee
Q 019481          242 -ITFLSALKITG---CKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       242 -~~~~~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                       .........+.   ++-..|++.||.+||+++++++|||+.
T Consensus       232 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~  273 (285)
T cd06648         232 PPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLA  273 (285)
T ss_pred             CCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccc
Confidence             00000011111   234478999999999999999999993

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.97  E-value=6.3e-32  Score=235.11  Aligned_cols=179  Identities=17%  Similarity=0.130  Sum_probs=133.9

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||++.... +..+|+|.+....  ...+.+.+|++++++++||||+++++++.       +....+++|||++
T Consensus        13 g~G~~~~vy~~~~~~-~~~~a~K~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~iv~e~~~   82 (256)
T cd05114          13 GSGQFGVVHLGKWRA-QIKVAIKAINEGA--MSEEDFIEEAKVMMKLSHPKLVQLYGVCT-------QQKPLYIVTEFME   82 (256)
T ss_pred             cCCcCceEEEEEecc-CceEEEEecccCC--ccHHHHHHHHHHHHHCCCCCceeEEEEEc-------cCCCEEEEEEcCC
Confidence            368999999998754 4579999886322  23456889999999999999999999664       3346789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +|+|.+++.....    .+++..+..++.|++.||+|||+  ++|+||||||+||+++.++.+||+|||+++........
T Consensus        83 ~~~L~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~  156 (256)
T cd05114          83 NGCLLNYLRQRQG----KLSKDMLLSMCQDVCEGMEYLER--NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT  156 (256)
T ss_pred             CCcHHHHHHhCcc----CCCHHHHHHHHHHHHHHHHHHHH--CCccccccCcceEEEcCCCeEEECCCCCccccCCCcee
Confidence            9999999976443    38999999999999999999999  88999999999999999999999999999765432211


Q ss_pred             --ceeeccceeeccCccccchh-hhhHhHhCCcccccc
Q 019481          164 --LTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDE  198 (340)
Q Consensus       164 --~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~  198 (340)
                        ....++..|++|+...+.++ ...|+|+.|...+.+
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el  194 (256)
T cd05114         157 SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEV  194 (256)
T ss_pred             ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHH
Confidence              11123445777754332211 123555544444443

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.97  E-value=1.6e-31  Score=229.97  Aligned_cols=151  Identities=15%  Similarity=0.025  Sum_probs=124.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      -|.||.||++++..+++.||+|.+....      ...+|...+....||||+++++++.       +....++++||+++
T Consensus         3 ~g~~~~v~~~~~~~~~~~~~~K~i~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~-------~~~~~~lv~e~~~~   69 (237)
T cd05576           3 LGVIDKVLLVMDTRTQQTFILKGLRKSS------EYSRERLTIIPHCVPNMVCLHKYIV-------SEDSVFLVLQHAEG   69 (237)
T ss_pred             ccccceEEEEEEccCCcEEEEEeecchh------hhhhHHHHHHhcCCCceeehhhhee-------cCCeEEEEEecCCC
Confidence            4899999999999999999999996421      2334555566677999999999765       33467899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCcc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADL  164 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~  164 (340)
                      |+|.+++.....     +++..+..++.|+++||+|||+  ++|+||||||+||+++.++.++++|||.+......  ..
T Consensus        70 ~~L~~~l~~~~~-----l~~~~~~~~~~ql~~~l~~lH~--~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~--~~  140 (237)
T cd05576          70 GKLWSHISKFLN-----IPEECVKRWAAEMVVALDALHR--EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS--CD  140 (237)
T ss_pred             CCHHHHHHHhcC-----CCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHEEEcCCCCEEEecccchhccccc--cc
Confidence            999999987655     9999999999999999999999  88999999999999999999999999988665432  12


Q ss_pred             eeeccceeeccCc
Q 019481          165 TALDTSSVSAQSG  177 (340)
Q Consensus       165 ~~~gt~~~~~p~~  177 (340)
                      ...++..|++|+.
T Consensus       141 ~~~~~~~y~aPE~  153 (237)
T cd05576         141 GEAVENMYCAPEV  153 (237)
T ss_pred             cCCcCccccCCcc
Confidence            3344566777763

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.97  E-value=3.2e-31  Score=236.98  Aligned_cols=236  Identities=20%  Similarity=0.172  Sum_probs=165.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc--CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI--TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|++..+++.||+|.+...  ......+.+.+|+++++.++||||+++++++.       +....++++||
T Consensus        24 g~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~-------~~~~~~lv~e~   96 (307)
T cd06607          24 GHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYL-------REHTAWLVMEY   96 (307)
T ss_pred             cCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEE-------eCCeEEEEHHh
Confidence            4688999999999999999999998642  22344467889999999999999999999665       33467799999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      ++ |+|.+.+.....    .+++..+..++.|++.||.|||+  .+|+||||+|+||+++.++.+||+|||++...... 
T Consensus        97 ~~-g~l~~~~~~~~~----~l~~~~~~~~~~ql~~~L~~LH~--~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~-  168 (307)
T cd06607          97 CL-GSASDILEVHKK----PLQEVEIAAICHGALQGLAYLHS--HERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA-  168 (307)
T ss_pred             hC-CCHHHHHHHccc----CCCHHHHHHHHHHHHHHHHHHHH--CCceecCCCcccEEECCCCCEEEeecCcceecCCC-
Confidence            97 588777765433    38999999999999999999999  77999999999999999999999999999765432 


Q ss_pred             CcceeeccceeeccCccccch----hhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHH
Q 019481          162 ADLTALDTSSVSAQSGKTGME----MKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIAT  237 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~----~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (340)
                        ....|+..|++|+...+.+    -...|+|+.|                     ++..++.+|..+|.......... 
T Consensus       169 --~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G---------------------~il~el~tg~~p~~~~~~~~~~~-  224 (307)
T cd06607         169 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG---------------------ITCIELAERKPPLFNMNAMSALY-  224 (307)
T ss_pred             --CCccCCccccCceeeeccCCCCCCcccchHHHH---------------------HHHHHHHcCCCCCCCccHHHHHH-
Confidence              2345677788776432110    0112333333                     33333333333322211110000 


Q ss_pred             hhhhccccccCcCC--------ccccccccccCCCCchHHHHhhcCcceeee
Q 019481          238 LLSTITFLSALKIT--------GCKSEEGYKNNSSLNPICQIVNQHPFYIRL  281 (340)
Q Consensus       238 ~~~~~~~~~~~~~p--------~~~~~~~l~~dP~~R~t~~~ll~hp~~~~~  281 (340)
                         .+.....+..+        .++...|+..||.+||++++++.|||+.+.
T Consensus       225 ---~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  273 (307)
T cd06607         225 ---HIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRE  273 (307)
T ss_pred             ---HHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccc
Confidence               00011111111        123447899999999999999999999443

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.97  E-value=1.9e-31  Score=235.12  Aligned_cols=143  Identities=17%  Similarity=0.219  Sum_probs=123.6

Q ss_pred             CCCcceEEEEEEcCCCCc----eEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            4 SAPSFSVLIHVPFPDDRD----DVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~----~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      +.|+||.||+|.++.+++    .+|+|..+..........+.+|++++++++||||+++++++..        ...++++
T Consensus        16 g~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------~~~~~v~   87 (279)
T cd05057          16 GSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS--------SQVQLIT   87 (279)
T ss_pred             cCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec--------CceEEEE
Confidence            468999999999876654    5899988765444556778999999999999999999996542        3567899


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      ||+++|+|.+++.....    .+++..+..++.||+.||+|||+  ++|+||||||+||+++.++.+||+|||+++....
T Consensus        88 e~~~~g~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~LH~--~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~  161 (279)
T cd05057          88 QLMPLGCLLDYVRNHKD----NIGSQYLLNWCVQIAKGMSYLEE--KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV  161 (279)
T ss_pred             ecCCCCcHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHh--CCEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence            99999999999987654    38999999999999999999999  7799999999999999999999999999987654


Q ss_pred             c
Q 019481          160 E  160 (340)
Q Consensus       160 ~  160 (340)
                      .
T Consensus       162 ~  162 (279)
T cd05057         162 D  162 (279)
T ss_pred             c
Confidence            3

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.97  E-value=3.8e-31  Score=231.41  Aligned_cols=164  Identities=20%  Similarity=0.207  Sum_probs=134.6

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeec--cCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHEL--ITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~--~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      +.|+||.||+|++..+++.||+|.++.  .......+.+.+|++++++++|+||++++++|..       ....++++||
T Consensus        11 g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~-------~~~~~lv~e~   83 (267)
T cd08224          11 GKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIE-------NNELNIVLEL   83 (267)
T ss_pred             ccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeec-------CCeEEEEEec
Confidence            478899999999998999999999864  2223345678999999999999999999997753       3467899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+++..... ....+++..+..++.|++.||.|||+  .+|+||||||+||+++.++.++|+|||+++......
T Consensus        84 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~--~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~  160 (267)
T cd08224          84 ADAGDLSRMIKHFKK-QKRLIPERTIWKYFVQLCSALEHMHS--KRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT  160 (267)
T ss_pred             CCCCCHHHHHHHhcc-cCCCcCHHHHHHHHHHHHHHHHHHHh--CCEecCCcChhhEEECCCCcEEEeccceeeeccCCC
Confidence            999999999865321 11348999999999999999999999  779999999999999999999999999998665432


Q ss_pred             -CcceeeccceeeccCc
Q 019481          162 -ADLTALDTSSVSAQSG  177 (340)
Q Consensus       162 -~~~~~~gt~~~~~p~~  177 (340)
                       ......|+..|.+|+.
T Consensus       161 ~~~~~~~~~~~y~apE~  177 (267)
T cd08224         161 TAAHSLVGTPYYMSPER  177 (267)
T ss_pred             cccceecCCccccCHHH
Confidence             2233457777888763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.97  E-value=3.8e-32  Score=237.05  Aligned_cols=141  Identities=22%  Similarity=0.329  Sum_probs=120.0

Q ss_pred             CCcceEEEEEEcC----CCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVPFP----DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~~~----~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|+||.||+|...    ..+..|++|.++........+.+.+|++.+++++||||++++|++.       +...+++++|
T Consensus         9 ~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~-------~~~~~~lv~e   81 (259)
T PF07714_consen    9 EGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCI-------ENEPLFLVME   81 (259)
T ss_dssp             EESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEE-------SSSSEEEEEE
T ss_pred             cCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccc-------cccccccccc
Confidence            5899999999987    4567899999976555556788999999999999999999999664       2234779999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceee
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVS  157 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~  157 (340)
                      |+++|+|.+++.....   ..+++..+..++.||++||+|||+  ++++|+||+++||+++.++.+||+|||+++..
T Consensus        82 ~~~~g~L~~~L~~~~~---~~~~~~~~~~i~~~i~~~l~~Lh~--~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~  153 (259)
T PF07714_consen   82 YCPGGSLDDYLKSKNK---EPLSEQQRLSIAIQIAEALSYLHS--NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPI  153 (259)
T ss_dssp             --TTEBHHHHHHHTCT---TTSBHHHHHHHHHHHHHHHHHHHH--TTEEEST-SGGGEEEETTTEEEEESTTTGEET
T ss_pred             cccccccccccccccc---cccccccccccccccccccccccc--cccccccccccccccccccccccccccccccc
Confidence            9999999999998722   349999999999999999999999  88999999999999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.97  E-value=2.2e-31  Score=230.79  Aligned_cols=159  Identities=19%  Similarity=0.189  Sum_probs=128.6

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|... +++.+|+|+++..........+.+|++++++++||||+++++++.       +....++++||++
T Consensus         4 g~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~~~   75 (250)
T cd05085           4 GKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT-------QRQPIYIVMELVP   75 (250)
T ss_pred             CCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEe-------cCCccEEEEECCC
Confidence            46899999999865 577899999876444445567889999999999999999999654       3346789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +|+|.+++.....    .+++..+..++.|++.||.|||+  ++++||||||+||+++.++.+||+|||+++........
T Consensus        76 ~~~L~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~--~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~  149 (250)
T cd05085          76 GGDFLSFLRKKKD----ELKTKQLVKFALDAAAGMAYLES--KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS  149 (250)
T ss_pred             CCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHh--CCeeecccChheEEEcCCCeEEECCCccceeccccccc
Confidence            9999999876543    38999999999999999999999  88999999999999999999999999999765432211


Q ss_pred             c--eeeccceeeccC
Q 019481          164 L--TALDTSSVSAQS  176 (340)
Q Consensus       164 ~--~~~gt~~~~~p~  176 (340)
                      .  ...++..|++|+
T Consensus       150 ~~~~~~~~~~y~aPE  164 (250)
T cd05085         150 SSGLKQIPIKWTAPE  164 (250)
T ss_pred             cCCCCCCcccccCHH
Confidence            1  112234566665

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.97  E-value=1.9e-31  Score=232.78  Aligned_cols=182  Identities=18%  Similarity=0.132  Sum_probs=135.0

Q ss_pred             CCCcceEEEEEEcCC---CCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPD---DRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~---~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      +.|+||.||+|++..   ....||+|.+.........+.+.+|+.+++.++||||+++++++..      .+...++++|
T Consensus         4 g~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~~lv~e   77 (262)
T cd05058           4 GKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLP------SEGSPLVVLP   77 (262)
T ss_pred             cccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeec------CCCCcEEEEe
Confidence            478999999998643   3457999998654444556778899999999999999999985431      2234668999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      |+++|+|.+++.....    ..++..+..++.|+++||+|||+  .+++||||||+|||++.++.+||+|||+++.+...
T Consensus        78 ~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~  151 (262)
T cd05058          78 YMKHGDLRNFIRSETH----NPTVKDLIGFGLQVAKGMEYLAS--KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDK  151 (262)
T ss_pred             cCCCCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHh--CCccccccCcceEEEcCCCcEEECCccccccccCC
Confidence            9999999999986543    26788889999999999999999  88999999999999999999999999999765432


Q ss_pred             CC-----cceeeccceeeccCccccchhh-hhHhHhCCccccc
Q 019481          161 NA-----DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHD  197 (340)
Q Consensus       161 ~~-----~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~  197 (340)
                      ..     .....++..|++|+.+.+.+.. ..|+|+.|...+.
T Consensus       152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~e  194 (262)
T cd05058         152 EYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE  194 (262)
T ss_pred             cceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHH
Confidence            11     1122345567777533222111 2345554444443

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.97  E-value=1.1e-31  Score=237.16  Aligned_cols=164  Identities=16%  Similarity=0.142  Sum_probs=128.8

Q ss_pred             CCcceEEEEEEcCC-----CCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            5 APSFSVLIHVPFPD-----DRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         5 ~G~fg~V~~~~~~~-----~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      .|+||.||+|++..     .++.||+|+++........+.+.+|+.++++++||||+++++++.       +....++++
T Consensus        15 ~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~-------~~~~~~~~~   87 (283)
T cd05091          15 EDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVT-------KEQPLSMIF   87 (283)
T ss_pred             CCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-------CCCceEEEE
Confidence            58899999998754     357899999986544445567889999999999999999999664       333567899


Q ss_pred             ccccCCCHHHHhcccCCC-----------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEE
Q 019481           80 WLMQKKGLENVHIGEHPA-----------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNL  148 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl  148 (340)
                      ||+++++|.+++......           ....+++..+..++.|++.||+|||+  ++|+||||||+||+++.++.+||
T Consensus        88 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~--~gi~H~dlkp~Nil~~~~~~~kl  165 (283)
T cd05091          88 SYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS--HHVVHKDLATRNVLVFDKLNVKI  165 (283)
T ss_pred             EcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH--cCccccccchhheEecCCCceEe
Confidence            999999999998643210           01348889999999999999999999  77999999999999999999999


Q ss_pred             eccccceeecccCCc---ceeeccceeeccCc
Q 019481          149 SDFSTAKVSAVENAD---LTALDTSSVSAQSG  177 (340)
Q Consensus       149 ~DFGla~~~~~~~~~---~~~~gt~~~~~p~~  177 (340)
                      +|||+++........   ....+++.|++|+.
T Consensus       166 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  197 (283)
T cd05091         166 SDLGLFREVYAADYYKLMGNSLLPIRWMSPEA  197 (283)
T ss_pred             cccccccccccchheeeccCccCCccccCHHH
Confidence            999998866443211   12234556777753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.97  E-value=1.4e-31  Score=237.82  Aligned_cols=187  Identities=12%  Similarity=0.061  Sum_probs=138.4

Q ss_pred             CCCcceEEEEEEcCCCC--------------ceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCcccccccccccccccc
Q 019481            4 SAPSFSVLIHVPFPDDR--------------DDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLT   69 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~--------------~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~   69 (340)
                      +.|+||.||+|++..++              ..||+|.++..........+.+|++++++++||||+++++++..     
T Consensus        14 g~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~-----   88 (295)
T cd05097          14 GEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVS-----   88 (295)
T ss_pred             CCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcC-----
Confidence            47999999999875432              35899999765444556678999999999999999999997643     


Q ss_pred             CCcceeeeeeccccCCCHHHHhcccCCC-------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC
Q 019481           70 GDRRYCWKNKWLMQKKGLENVHIGEHPA-------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE  142 (340)
Q Consensus        70 ~~~~~~~~~~e~~~~gsL~~~l~~~~~~-------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~  142 (340)
                        ....+++|||+++++|.+++......       ....+++..+..++.|++.||+|||+  ++++||||||+||+++.
T Consensus        89 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~--~~i~H~dlkp~Nill~~  164 (295)
T cd05097          89 --DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS--LNFVHRDLATRNCLVGN  164 (295)
T ss_pred             --CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh--cCeeccccChhhEEEcC
Confidence              33567999999999999998654210       01137889999999999999999999  88999999999999999


Q ss_pred             CCceEEeccccceeecccCCc---ceeeccceeeccCccccchhh-hhHhHhCCccccccc
Q 019481          143 TFKCNLSDFSTAKVSAVENAD---LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEA  199 (340)
Q Consensus       143 ~~~~kl~DFGla~~~~~~~~~---~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~  199 (340)
                      ++.+||+|||+++........   ....++..|++|+...+..+. ..|+|+.|...+.+.
T Consensus       165 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~  225 (295)
T cd05097         165 HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMF  225 (295)
T ss_pred             CCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHH
Confidence            999999999999765432211   112335567777543322111 235666555555443

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.97  E-value=3.1e-31  Score=239.66  Aligned_cols=187  Identities=17%  Similarity=0.154  Sum_probs=143.4

Q ss_pred             CCcceEEEEEEcCCC--CceEEEEEeeccC-chhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVPFPDD--RDDVMLKLHELIT-PLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~--~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|+||.||++++..+  ++.||+|.+.... .....+.+.+|+++++++ +||||+++++.+...   ..+....++++|
T Consensus        10 ~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~---~~~~~~~~~~~e   86 (332)
T cd07857          10 QGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVF---PGNFNELYLYEE   86 (332)
T ss_pred             ccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeec---cccCCcEEEEEe
Confidence            588999999999887  8899999987422 222345678899999999 599999999854321   123345778899


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      ++. ++|.+.+.....     +++..++.++.||+.||+|||+  ++|+||||||+||+++.++.+||+|||+++.....
T Consensus        87 ~~~-~~L~~~l~~~~~-----~~~~~~~~~~~qi~~aL~~LH~--~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~  158 (332)
T cd07857          87 LME-ADLHQIIRSGQP-----LTDAHFQSFIYQILCGLKYIHS--ANVLHRDLKPGNLLVNADCELKICDFGLARGFSEN  158 (332)
T ss_pred             ccc-CCHHHHHhcCCC-----CCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHeEEcCCCCEEeCcCCCceecccc
Confidence            986 699999987655     9999999999999999999999  88999999999999999999999999999876532


Q ss_pred             CC-----cceeeccceeeccCccccch--hhhhHhHhCCcccccccccc
Q 019481          161 NA-----DLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       161 ~~-----~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~  202 (340)
                      ..     .....||..|++|+...+..  -...|+|+.|...+....+.
T Consensus       159 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~  207 (332)
T cd07857         159 PGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRK  207 (332)
T ss_pred             cccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            21     12346788888887543311  12357777777766654433

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.97  E-value=2.3e-31  Score=236.09  Aligned_cols=240  Identities=15%  Similarity=0.104  Sum_probs=168.1

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||++.+..+++.||+|.+.... ......+.+|+.+++.++||||+++++.|.       +.++.++++||++
T Consensus        29 g~g~~g~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-------~~~~~~lv~e~~~  100 (292)
T cd06657          29 GEGSTGIVCIATVKSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYL-------VGDELWVVMEFLE  100 (292)
T ss_pred             CCCCCeEEEEEEEcCCCeEEEEEEecccc-hhHHHHHHHHHHHHHhcCCcchhheeeEEE-------eCCEEEEEEecCC
Confidence            46899999999999999999999986432 344566889999999999999999999765       3347789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-C
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-A  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~  162 (340)
                      +++|.+++... .     +++..++.++.|++.||+|||+  ++++||||||+||+++.++.++|+|||++....... .
T Consensus       101 ~~~L~~~~~~~-~-----~~~~~~~~~~~ql~~~l~~lH~--~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~  172 (292)
T cd06657         101 GGALTDIVTHT-R-----MNEEQIAAVCLAVLKALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR  172 (292)
T ss_pred             CCcHHHHHhcC-C-----CCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEECCCCCEEEcccccceeccccccc
Confidence            99999987643 2     8999999999999999999999  889999999999999999999999999987664432 2


Q ss_pred             cceeeccceeeccCccccchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      .....|+..|++|+...+... ...|+|+.|...+.+.++..+|.  ....             .. ....  .. ....
T Consensus       173 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~--~~~~-------------~~-~~~~--~~-~~~~  233 (292)
T cd06657         173 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF--NEPP-------------LK-AMKM--IR-DNLP  233 (292)
T ss_pred             ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCC--CCCH-------------HH-HHHH--HH-hhCC
Confidence            233457777888864332111 12355555544444433322121  1000             00 0000  00 0000


Q ss_pred             ccccccCcCC---ccccccccccCCCCchHHHHhhcCcce
Q 019481          242 ITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       242 ~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .........+   .++...|+++||.+||++.+++.|||+
T Consensus       234 ~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~  273 (292)
T cd06657         234 PKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL  273 (292)
T ss_pred             cccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHH
Confidence            0000111111   223457899999999999999999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.97  E-value=2.1e-31  Score=231.52  Aligned_cols=239  Identities=18%  Similarity=0.142  Sum_probs=168.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      +.|+||.||++++..+++.+|+|.+.... .......+.+|++++++++||||++++++|..       ....++++||+
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------~~~~~~v~e~~   81 (256)
T cd08530           9 GKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLD-------GNKLCIVMEYA   81 (256)
T ss_pred             cCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhcc-------CCEEEEEehhc
Confidence            46899999999999999999999987522 23445667889999999999999999997653       34778999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      ++++|.+++.+... .+..+++..+..++.|++.||+|||+  .+++|+||||+||+++.++.+||+|||++...... .
T Consensus        82 ~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lh~--~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-~  157 (256)
T cd08530          82 PFGDLSKAISKRKK-KRKLIPEQEIWRIFIQLLRGLQALHE--QKILHRDLKSANILLVANDLVKIGDLGISKVLKKN-M  157 (256)
T ss_pred             CCCCHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhh--CCcccCCCCcceEEEecCCcEEEeeccchhhhccC-C
Confidence            99999999876321 01348999999999999999999999  78999999999999999999999999999876554 2


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      .....|+..|++|+...+.... ..|+|+.|...+.+..+.  .|+.......              .      ...   
T Consensus       158 ~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~--~p~~~~~~~~--------------~------~~~---  212 (256)
T cd08530         158 AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFA--PPFEARSMQD--------------L------RYK---  212 (256)
T ss_pred             cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCC--CCCCCCCHHH--------------H------HHH---
Confidence            2234567777777544332221 235555554444433222  2222111100              0      000   


Q ss_pred             ccccccCcCCc-------cccccccccCCCCchHHHHhhcCcce
Q 019481          242 ITFLSALKITG-------CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       242 ~~~~~~~~~p~-------~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      +.....+..+.       .+...|++.||.+||+++++++||++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         213 VQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV  256 (256)
T ss_pred             HhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence            00111111211       22347799999999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.97  E-value=2.3e-31  Score=232.21  Aligned_cols=158  Identities=16%  Similarity=0.180  Sum_probs=127.1

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|.+. ++..||+|.+...  ....+.+.+|+.++++++||||+++++.+.       +....++++||++
T Consensus        15 g~g~~g~v~~~~~~-~~~~v~iK~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~~~   84 (261)
T cd05072          15 GAGQFGEVWMGYYN-NSTKVAVKTLKPG--TMSVQAFLEEANLMKTLQHDKLVRLYAVVT-------KEEPIYIITEYMA   84 (261)
T ss_pred             CCcCCceEEEEEec-CCceEEEEEccCC--chhHHHHHHHHHHHHhCCCCCeeeEEEEEc-------CCCCcEEEEecCC
Confidence            35889999999975 4567999988642  223567899999999999999999998654       4456789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +|+|.++++....   ..+++..+..++.|+++||+|||+  .+++||||||+||+++.++.+||+|||+++........
T Consensus        85 ~~~L~~~l~~~~~---~~~~~~~~~~~~~~l~~~l~~LH~--~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~  159 (261)
T cd05072          85 KGSLLDFLKSDEG---GKVLLPKLIDFSAQIAEGMAYIER--KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT  159 (261)
T ss_pred             CCcHHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeccccchhhEEecCCCcEEECCCccceecCCCcee
Confidence            9999999976533   348899999999999999999999  88999999999999999999999999999876543211


Q ss_pred             --ceeeccceeeccC
Q 019481          164 --LTALDTSSVSAQS  176 (340)
Q Consensus       164 --~~~~gt~~~~~p~  176 (340)
                        ....++..|++|+
T Consensus       160 ~~~~~~~~~~y~aPE  174 (261)
T cd05072         160 AREGAKFPIKWTAPE  174 (261)
T ss_pred             ccCCCccceecCCHH
Confidence              1122344566664

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.97  E-value=5e-31  Score=232.60  Aligned_cols=185  Identities=18%  Similarity=0.133  Sum_probs=144.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCch-hhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPL-QLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|++|.||+|++..+++.+|+|.++..... .....+.+|++++++++||||+++++++.       +....++++||+
T Consensus         8 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-------~~~~~~~v~e~~   80 (283)
T cd05118           8 GEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFR-------HKGDLYLVFEFM   80 (283)
T ss_pred             ecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhc-------cCCCEEEEEecc
Confidence            3578999999999999999999998753222 34567889999999999999999999654       335778999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-  161 (340)
                      ++ +|.+.+.....    .+++..+..++.|+++||.|||+  ++|+|+||||+||+++.++.+||+|||.+....... 
T Consensus        81 ~~-~l~~~l~~~~~----~~~~~~~~~~~~~i~~~l~~LH~--~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~  153 (283)
T cd05118          81 DT-DLYKLIKDRQR----GLPESLIKSYLYQLLQGLAFCHS--HGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR  153 (283)
T ss_pred             CC-CHHHHHHhhcc----cCCHHHHHHHHHHHHHHHHHHHH--CCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc
Confidence            75 99888877543    38999999999999999999999  889999999999999999999999999998775543 


Q ss_pred             CcceeeccceeeccCccccc-h-hhhhHhHhCCcccccccccc
Q 019481          162 ADLTALDTSSVSAQSGKTGM-E-MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~-~-~~~~~~~s~g~~~~~~~~~~  202 (340)
                      ......++..|++|+...+. . -...|+|+.|...+.+.++.
T Consensus       154 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~  196 (283)
T cd05118         154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRR  196 (283)
T ss_pred             cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCC
Confidence            22234466777777644332 1 11246666666665554444

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.97  E-value=4.8e-31  Score=238.69  Aligned_cols=184  Identities=16%  Similarity=0.112  Sum_probs=142.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchh-------------hHHHHHHHHHHhhhcCCCccccccccccccccccC
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQ-------------LRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTG   70 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~-------------~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~   70 (340)
                      ..|+||.||+|++..+++.||+|.+.......             ....+.+|++++++++||||++++++|.       
T Consensus        18 g~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------   90 (335)
T PTZ00024         18 GEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYV-------   90 (335)
T ss_pred             cCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEe-------
Confidence            47899999999999999999999987422111             0124678999999999999999999765       


Q ss_pred             CcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEec
Q 019481           71 DRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSD  150 (340)
Q Consensus        71 ~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~D  150 (340)
                      +..+.++++||++ |+|.+++.....     +++..+..++.|++.||+|||+  .+|+||||||+||+++.++.+||+|
T Consensus        91 ~~~~~~lv~e~~~-~~l~~~l~~~~~-----~~~~~~~~~~~ql~~aL~~LH~--~~i~H~dl~~~nill~~~~~~kl~d  162 (335)
T PTZ00024         91 EGDFINLVMDIMA-SDLKKVVDRKIR-----LTESQVKCILLQILNGLNVLHK--WYFMHRDLSPANIFINSKGICKIAD  162 (335)
T ss_pred             cCCcEEEEEeccc-cCHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCeecccccHHHeEECCCCCEEECC
Confidence            3347789999997 699999987655     8999999999999999999999  7799999999999999999999999


Q ss_pred             cccceeeccc---------------CCcceeeccceeeccCccccch--hhhhHhHhCCcccccccccc
Q 019481          151 FSTAKVSAVE---------------NADLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       151 FGla~~~~~~---------------~~~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~  202 (340)
                      ||+++.....               .......++..|++|+...+..  -...|+|+.|...+.+.++.
T Consensus       163 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~  231 (335)
T PTZ00024        163 FGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGK  231 (335)
T ss_pred             ccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            9999866511               1111234566788886554322  12346666666666655443

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.97  E-value=2.8e-31  Score=229.75  Aligned_cols=159  Identities=21%  Similarity=0.258  Sum_probs=134.6

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|++|.||++.+..+++.+++|+++.... ...+.+.+|++++++++||||+++++.|...       ..+++++||++
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-------~~~~l~~e~~~   80 (253)
T cd05122           9 GKGGFGEVYKARHKRTGKEVAIKVIKLESK-EKKEKIINEIQILKKCKHPNIVKYYGSYLKK-------DELWIVMEFCS   80 (253)
T ss_pred             ccCCceEEEEEEECCCCcEEEEEEecccch-hHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-------CeEEEEEecCC
Confidence            357899999999998999999999975332 4567789999999999999999999966533       46789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +++|.+++.....    .+++..+..++.|+++||+|||+  .+++||||+|+||+++.++.+||+|||.+.........
T Consensus        81 ~~~L~~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lh~--~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  154 (253)
T cd05122          81 GGSLKDLLKSTNQ----TLTESQIAYVCKELLKGLEYLHS--NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKAR  154 (253)
T ss_pred             CCcHHHHHhhcCC----CCCHHHHHHHHHHHHHHHHHhhc--CCEecCCCCHHHEEEccCCeEEEeeccccccccccccc
Confidence            9999999987632    38999999999999999999999  78999999999999999999999999999877654433


Q ss_pred             ceeeccceeeccC
Q 019481          164 LTALDTSSVSAQS  176 (340)
Q Consensus       164 ~~~~gt~~~~~p~  176 (340)
                      ....|+..|++|+
T Consensus       155 ~~~~~~~~~~~PE  167 (253)
T cd05122         155 NTMVGTPYWMAPE  167 (253)
T ss_pred             cceecCCcccCHH
Confidence            3445666677664

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.97  E-value=3.2e-31  Score=232.19  Aligned_cols=230  Identities=15%  Similarity=0.086  Sum_probs=159.4

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+++++.+++.+|+|.+.......      .|+.....+ +||||++++++|..       .+..+++|||+
T Consensus        25 g~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~------~e~~~~~~~~~h~~iv~~~~~~~~-------~~~~~iv~e~~   91 (267)
T PHA03390         25 IDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA------IEPMVHQLMKDNPNFIKLYYSVTT-------LKGHVLIMDYI   91 (267)
T ss_pred             cCCCceEEEEEEEcCCCcEEEEEEEehhhcch------hhHHHHHHhhcCCCEEEEEEEEec-------CCeeEEEEEcC
Confidence            57889999999999999999999996422111      122222222 69999999997653       33778999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC-ceEEeccccceeecccC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF-KCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~-~~kl~DFGla~~~~~~~  161 (340)
                      ++|+|.+++.....     +++..+..++.||++||+|||+  .+++||||||+||+++.++ .++|+|||+++..... 
T Consensus        92 ~~~~L~~~l~~~~~-----l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~-  163 (267)
T PHA03390         92 KDGDLFDLLKKEGK-----LSEAEVKKIIRQLVEALNDLHK--HNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP-  163 (267)
T ss_pred             CCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC-
Confidence            99999999987655     9999999999999999999999  7799999999999999988 9999999999876443 


Q ss_pred             CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                        ....|+..|++|+...+.+.. ..|+|+.|...+.+.++.  .||.......+         .......         
T Consensus       164 --~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~--~p~~~~~~~~~---------~~~~~~~---------  221 (267)
T PHA03390        164 --SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGK--HPFKEDEDEEL---------DLESLLK---------  221 (267)
T ss_pred             --ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCC--CCCCCCCcchh---------hHHHHHH---------
Confidence              234678888888644322211 235565555555544433  22221111000         0000000         


Q ss_pred             hccccccCc----CC---ccccccccccCCCCchH-HHHhhcCcce
Q 019481          241 TITFLSALK----IT---GCKSEEGYKNNSSLNPI-CQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~~~~----~p---~~~~~~~l~~dP~~R~t-~~~ll~hp~~  278 (340)
                      ..  ...+.    .+   .++...+|+.||.+|++ ++++++|||+
T Consensus       222 ~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~  265 (267)
T PHA03390        222 RQ--QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFL  265 (267)
T ss_pred             hh--cccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcc
Confidence            00  01111    11   12344779999999996 6999999998

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.97  E-value=2.5e-31  Score=236.92  Aligned_cols=189  Identities=17%  Similarity=0.117  Sum_probs=140.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc-hhhHHHHHHHHHHhhhcCCCccccccccccccc---cccCCcceeeeee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP-LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNI---CLTGDRRYCWKNK   79 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~---~~~~~~~~~~~~~   79 (340)
                      ..|+||.||+|++..+++.||+|.++.... ......+.+|++++++++||||+++++++....   ....+....++++
T Consensus        16 g~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~   95 (302)
T cd07864          16 GEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVF   95 (302)
T ss_pred             cccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEE
Confidence            358899999999999999999999975322 223356778999999999999999999776432   1112334788999


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      ||+++ ++.+.+.....    .+++..++.++.||+.||+|||+  .+|+||||||+||++++++.+||+|||+++....
T Consensus        96 e~~~~-~l~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~--~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~  168 (302)
T cd07864          96 EYMDH-DLMGLLESGLV----HFSEDHIKSFMKQLLEGLNYCHK--KNFLHRDIKCSNILLNNKGQIKLADFGLARLYNS  168 (302)
T ss_pred             cccCc-cHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEECCCCcEEeCcccccccccC
Confidence            99975 77777776532    38999999999999999999999  7899999999999999999999999999987654


Q ss_pred             cCC--cceeeccceeeccCccccch--hhhhHhHhCCccccccc
Q 019481          160 ENA--DLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEA  199 (340)
Q Consensus       160 ~~~--~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~  199 (340)
                      ...  .....++..|++|+.+.+..  -...|+|+.|...+.+.
T Consensus       169 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~  212 (302)
T cd07864         169 EESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF  212 (302)
T ss_pred             CcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHH
Confidence            332  11223456677776443211  11245555555554443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.97  E-value=2.2e-31  Score=236.04  Aligned_cols=186  Identities=16%  Similarity=0.116  Sum_probs=136.2

Q ss_pred             CCCcceEEEEEEcCC-----CCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPFPD-----DRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~-----~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      ..|+||.||+|++..     +...+|+|.+.........+.+.+|+++++.++||||+++++.+.       +....+++
T Consensus         9 g~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------~~~~~~lv   81 (290)
T cd05045           9 GEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACS-------QDGPLLLI   81 (290)
T ss_pred             cCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEe-------cCCCcEEE
Confidence            358899999998743     335799999875444455677899999999999999999999664       33457789


Q ss_pred             eccccCCCHHHHhcccCC-------------------CccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEE
Q 019481           79 KWLMQKKGLENVHIGEHP-------------------ASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNIL  139 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~-------------------~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NIL  139 (340)
                      +||+++|+|.+++.....                   .....+++..+..++.|++.||+|||+  ++|+||||||+|||
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~--~~ivH~dikp~nil  159 (290)
T cd05045          82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE--MKLVHRDLAARNVL  159 (290)
T ss_pred             EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH--CCeehhhhhhheEE
Confidence            999999999999865321                   011348899999999999999999999  88999999999999


Q ss_pred             ecCCCceEEeccccceeecccCC---cceeeccceeeccCccccchhh-hhHhHhCCcccccc
Q 019481          140 LDETFKCNLSDFSTAKVSAVENA---DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDE  198 (340)
Q Consensus       140 l~~~~~~kl~DFGla~~~~~~~~---~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~  198 (340)
                      +++++.+||+|||+++.......   .....++..|++|+...+..+. ..|+|+.|...+.+
T Consensus       160 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el  222 (290)
T cd05045         160 VAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI  222 (290)
T ss_pred             EcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHH
Confidence            99999999999999986533221   1122344557777533222111 22455544444443

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.97  E-value=1.9e-31  Score=236.98  Aligned_cols=165  Identities=15%  Similarity=0.104  Sum_probs=132.0

Q ss_pred             CCCcceEEEEEEcCCCC----------------ceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCcccccccccccccc
Q 019481            4 SAPSFSVLIHVPFPDDR----------------DDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNIC   67 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~----------------~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~   67 (340)
                      ..|+||.||+|++..++                ..||+|.+.........+.+.+|++++++++||||++++++|..   
T Consensus        14 g~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---   90 (296)
T cd05051          14 GEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTV---   90 (296)
T ss_pred             cCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEec---
Confidence            46889999999876543                56899998765545566788999999999999999999997653   


Q ss_pred             ccCCcceeeeeeccccCCCHHHHhcccCCC------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEec
Q 019481           68 LTGDRRYCWKNKWLMQKKGLENVHIGEHPA------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLD  141 (340)
Q Consensus        68 ~~~~~~~~~~~~e~~~~gsL~~~l~~~~~~------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~  141 (340)
                          ....++++|++++++|.+++......      ....+++..++.++.|++.||+|||+  .+|+||||||+||+++
T Consensus        91 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~--~~i~H~dlkp~Nili~  164 (296)
T cd05051          91 ----DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES--LNFVHRDLATRNCLVG  164 (296)
T ss_pred             ----CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH--cCccccccchhceeec
Confidence                24677999999999999999876511      01248999999999999999999999  7899999999999999


Q ss_pred             CCCceEEeccccceeecccCC---cceeeccceeeccCc
Q 019481          142 ETFKCNLSDFSTAKVSAVENA---DLTALDTSSVSAQSG  177 (340)
Q Consensus       142 ~~~~~kl~DFGla~~~~~~~~---~~~~~gt~~~~~p~~  177 (340)
                      .++.+||+|||+++.......   .....++..|++|+.
T Consensus       165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  203 (296)
T cd05051         165 KNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWES  203 (296)
T ss_pred             CCCceEEccccceeecccCcceeecCcCCCCceecCHHH
Confidence            999999999999986543321   112234566777753

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.97  E-value=2e-31  Score=232.49  Aligned_cols=159  Identities=19%  Similarity=0.212  Sum_probs=129.6

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|.+.. ++.+|+|++.... ......+.+|+++++.++||||+++++++.       +....++++||++
T Consensus        15 g~g~~~~vy~~~~~~-~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-------~~~~~~lv~e~~~   85 (261)
T cd05148          15 GSGYFGEVWEGLWKN-RVRVAIKILKSDD-LLKQQDFQKEVQALKRLRHKHLISLFAVCS-------VGEPVYIITELME   85 (261)
T ss_pred             ccCCCccEEEeEecC-CCcEEEEeccccc-hhhHHHHHHHHHHHhcCCCcchhheeeeEe-------cCCCeEEEEeecc
Confidence            468899999999987 7889999987532 234566889999999999999999999664       3346779999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +|+|.+++.....   ..+++..+..++.||+.||+|||+  ++|+||||||+||+++.++.+||+|||++.........
T Consensus        86 ~~~L~~~~~~~~~---~~~~~~~~~~~~~~i~~al~~lH~--~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~  160 (261)
T cd05148          86 KGSLLAFLRSPEG---QVLPVASLIDMACQVAEGMAYLEE--QNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL  160 (261)
T ss_pred             cCCHHHHHhcCCC---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeccccCcceEEEcCCceEEEccccchhhcCCcccc
Confidence            9999999987543   358999999999999999999999  88999999999999999999999999999776443211


Q ss_pred             -ceeeccceeeccC
Q 019481          164 -LTALDTSSVSAQS  176 (340)
Q Consensus       164 -~~~~gt~~~~~p~  176 (340)
                       ....++..|++|+
T Consensus       161 ~~~~~~~~~~~~PE  174 (261)
T cd05148         161 SSDKKIPYKWTAPE  174 (261)
T ss_pred             ccCCCCceEecCHH
Confidence             1122344566664

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.97  E-value=2.6e-31  Score=231.37  Aligned_cols=140  Identities=21%  Similarity=0.237  Sum_probs=119.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|.... +..+|+|.+...  ....+.+.+|++++++++||||+++++++..       ....+++|||++
T Consensus        13 g~G~~~~vy~~~~~~-~~~~aik~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~~lv~e~~~   82 (256)
T cd05113          13 GTGQFGVVKYGKWRG-QYDVAIKMIKEG--SMSEDEFIEEAKVMMKLSHEKLVQLYGVCTK-------QRPIYIVTEYMS   82 (256)
T ss_pred             cCcccceEEEEEecC-CCcEEEEEcCCC--cccHHHHHHHHHHHhcCCCCCeeeEEEEEcc-------CCCcEEEEEcCC
Confidence            358899999998754 446999998642  2234668899999999999999999997643       335689999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      +|+|.+++.....    .+++..+..++.||+.||+|||+  ++++|+||||+||+++.++.+||+|||+++....
T Consensus        83 ~~~l~~~i~~~~~----~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~  152 (256)
T cd05113          83 NGCLLNYLREHGK----RFQPSQLLEMCKDVCEGMAYLES--KQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLD  152 (256)
T ss_pred             CCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHh--CCeeccccCcceEEEcCCCCEEECCCccceecCC
Confidence            9999999986543    38999999999999999999999  8899999999999999999999999999986644

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.97  E-value=9.4e-31  Score=233.35  Aligned_cols=182  Identities=19%  Similarity=0.104  Sum_probs=137.5

Q ss_pred             CCcceEEEEEEc-----CCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeee
Q 019481            5 APSFSVLIHVPF-----PDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         5 ~G~fg~V~~~~~-----~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      .|+||.||+|++     ..++..||+|+++........+.+.+|+++++++ +||||+++++++..       ....+++
T Consensus        45 ~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-------~~~~~lv  117 (302)
T cd05055          45 AGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTI-------GGPILVI  117 (302)
T ss_pred             ccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEec-------CCceEEE
Confidence            588999999975     3355689999987544444556789999999999 79999999996643       3367899


Q ss_pred             eccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec
Q 019481           79 KWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      +||+++|+|.++++....   ..+++.++..++.|++.||+|||+  ++|+|+||||+|||++.++.+||+|||+++...
T Consensus       118 ~e~~~~~~L~~~i~~~~~---~~l~~~~~~~i~~~i~~~l~~lH~--~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~  192 (302)
T cd05055         118 TEYCCYGDLLNFLRRKRE---SFLTLEDLLSFSYQVAKGMAFLAS--KNCIHRDLAARNVLLTHGKIVKICDFGLARDIM  192 (302)
T ss_pred             EEcCCCCcHHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHHH--CCeehhhhccceEEEcCCCeEEECCCccccccc
Confidence            999999999999976443   238999999999999999999999  889999999999999999999999999998664


Q ss_pred             ccCC---cceeeccceeeccCccccchh-hhhHhHhCCcccccc
Q 019481          159 VENA---DLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDE  198 (340)
Q Consensus       159 ~~~~---~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~  198 (340)
                      ....   .....++..|++|+...+... ...|+|+.|...+.+
T Consensus       193 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el  236 (302)
T cd05055         193 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEI  236 (302)
T ss_pred             CCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHH
Confidence            4321   111234566777763321111 123555555444443

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.97  E-value=1.8e-31  Score=234.99  Aligned_cols=146  Identities=18%  Similarity=0.089  Sum_probs=122.3

Q ss_pred             CCCcceEEEEEEcCC-----CCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPFPD-----DRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~-----~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      +.|+||.||+|.+..     ++..||+|.............+.+|+.++++++|+||+++++++..       ....+++
T Consensus        15 g~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------~~~~~lv   87 (277)
T cd05036          15 GHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFE-------RLPRFIL   87 (277)
T ss_pred             CCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc-------CCCcEEE
Confidence            468999999999977     7788999998754445555678999999999999999999996643       2355689


Q ss_pred             eccccCCCHHHHhcccCCC--ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC---ceEEecccc
Q 019481           79 KWLMQKKGLENVHIGEHPA--SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF---KCNLSDFST  153 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~---~~kl~DFGl  153 (340)
                      +||+++|+|.+++......  ....+++..+..++.||+.||+|||+  ++++||||||+||+++.++   .+||+|||+
T Consensus        88 ~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~--~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~  165 (277)
T cd05036          88 LELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE--NHFIHRDIAARNCLLTCKGPGRVAKIADFGM  165 (277)
T ss_pred             EecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH--CCEeecccchheEEEeccCCCcceEeccCcc
Confidence            9999999999999765421  01248999999999999999999999  7899999999999998755   599999999


Q ss_pred             ceeec
Q 019481          154 AKVSA  158 (340)
Q Consensus       154 a~~~~  158 (340)
                      ++.+.
T Consensus       166 ~~~~~  170 (277)
T cd05036         166 ARDIY  170 (277)
T ss_pred             ccccC
Confidence            98763

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.97  E-value=2.5e-31  Score=237.73  Aligned_cols=191  Identities=15%  Similarity=0.106  Sum_probs=141.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc-hhhHHHHHHHHHHhhhcCCCccccccccccccccc-cCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP-LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICL-TGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~-~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|++..+++.+|+|.+..... ........+|++++++++||||+++++.+...... ..+....++++||
T Consensus        17 g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~   96 (311)
T cd07866          17 GEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPY   96 (311)
T ss_pred             ccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEec
Confidence            468899999999999999999999875322 22234567899999999999999999976543222 1234467899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +.+ +|.+.+.....    .+++..+..++.|+++||+|||+  ++|+||||||+||++++++.+||+|||+++......
T Consensus        97 ~~~-~l~~~~~~~~~----~~~~~~~~~i~~~l~~al~~lH~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  169 (311)
T cd07866          97 MDH-DLSGLLENPSV----KLTESQIKCYMLQLLEGINYLHE--NHILHRDIKAANILIDNQGILKIADFGLARPYDGPP  169 (311)
T ss_pred             CCc-CHHHHHhcccc----CCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEECCCCCEEECcCccchhccCCC
Confidence            964 78877765443    39999999999999999999999  889999999999999999999999999998654322


Q ss_pred             Cc------------ceeeccceeeccCccccch--hhhhHhHhCCccccccccc
Q 019481          162 AD------------LTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEK  201 (340)
Q Consensus       162 ~~------------~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~  201 (340)
                      ..            ....|++.|++|+...+..  -...|+|+.|...+.+.++
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g  223 (311)
T cd07866         170 PNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTR  223 (311)
T ss_pred             cccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhC
Confidence            11            1224566677776433211  1124666666555555443

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.97  E-value=8.5e-32  Score=236.72  Aligned_cols=185  Identities=15%  Similarity=0.106  Sum_probs=139.5

Q ss_pred             CCCcceEEEEEEcCC-----CCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPFPD-----DRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~-----~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      ..|+||.||+|+.+.     +.+.+|+|...........+.+.+|++++++++||||+++++++.       +....+++
T Consensus        14 g~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------~~~~~~lv   86 (275)
T cd05046          14 GRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCR-------EAEPHYMI   86 (275)
T ss_pred             cccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEEC-------CCCcceEE
Confidence            358999999999654     356799999875444335677899999999999999999999664       33467899


Q ss_pred             eccccCCCHHHHhcccCCCc----cccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccc
Q 019481           79 KWLMQKKGLENVHIGEHPAS----VRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTA  154 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~~----~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla  154 (340)
                      +||+++|+|.+++.......    ...+++..+..++.|++.||+|||+  ++|+||||||+||+++.++.+||+|||++
T Consensus        87 ~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~--~~i~H~dlkp~Nili~~~~~~~l~~~~~~  164 (275)
T cd05046          87 LEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN--ARFVHRDLAARNCLVSSQREVKVSLLSLS  164 (275)
T ss_pred             EEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh--cCcccCcCccceEEEeCCCcEEEcccccc
Confidence            99999999999998765210    0148999999999999999999999  77999999999999999999999999998


Q ss_pred             eeecccC--CcceeeccceeeccCccccchh-hhhHhHhCCccccc
Q 019481          155 KVSAVEN--ADLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHD  197 (340)
Q Consensus       155 ~~~~~~~--~~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~  197 (340)
                      +......  ......++..|++|+...+.+. ...|+|+.|...+.
T Consensus       165 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~  210 (275)
T cd05046         165 KDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWE  210 (275)
T ss_pred             cccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHH
Confidence            7543211  1122345666888864332221 12355655555444

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.97  E-value=9.9e-31  Score=232.56  Aligned_cols=147  Identities=14%  Similarity=0.152  Sum_probs=121.8

Q ss_pred             CCCcceEEEEEEcCC----------------CCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCcccccccccccccc
Q 019481            4 SAPSFSVLIHVPFPD----------------DRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNIC   67 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~----------------~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~   67 (340)
                      ..|+||.||++.+..                +...||+|.+.........+.+.+|++++++++||||+++++++..   
T Consensus        14 g~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~---   90 (296)
T cd05095          14 GEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCIT---   90 (296)
T ss_pred             cCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec---
Confidence            479999999985432                3457999999754444556788999999999999999999997643   


Q ss_pred             ccCCcceeeeeeccccCCCHHHHhcccCCC------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEec
Q 019481           68 LTGDRRYCWKNKWLMQKKGLENVHIGEHPA------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLD  141 (340)
Q Consensus        68 ~~~~~~~~~~~~e~~~~gsL~~~l~~~~~~------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~  141 (340)
                          ....++++||+++|+|.+++......      ....+++.++..++.|++.||+|||+  .+++||||||+|||++
T Consensus        91 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~--~~i~H~dlkp~Nili~  164 (296)
T cd05095          91 ----SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS--LNFVHRDLATRNCLVG  164 (296)
T ss_pred             ----CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH--CCeecccCChheEEEc
Confidence                33577999999999999999865421      01237788999999999999999999  7799999999999999


Q ss_pred             CCCceEEeccccceeecc
Q 019481          142 ETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus       142 ~~~~~kl~DFGla~~~~~  159 (340)
                      .++.+||+|||+++.+..
T Consensus       165 ~~~~~~l~dfg~~~~~~~  182 (296)
T cd05095         165 KNYTIKIADFGMSRNLYS  182 (296)
T ss_pred             CCCCEEeccCcccccccC
Confidence            999999999999986543

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.97  E-value=2.9e-31  Score=240.83  Aligned_cols=186  Identities=16%  Similarity=0.120  Sum_probs=142.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|.+..+++.||+|.+... ......+.+.+|++++++++||||+++++.|....... .....++++||+
T Consensus        24 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~-~~~~~~lv~e~~  102 (343)
T cd07880          24 GSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD-RFHDFYLVMPFM  102 (343)
T ss_pred             eecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc-ccceEEEEEecC
Confidence            3789999999999999999999998642 22334456889999999999999999999886543221 222457899998


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                       +++|.+++... .     +++..++.++.||++||+|||+  .+|+||||||+||+++.++.+||+|||+++.....  
T Consensus       103 -~~~l~~~~~~~-~-----l~~~~~~~i~~qi~~al~~LH~--~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~--  171 (343)
T cd07880         103 -GTDLGKLMKHE-K-----LSEDRIQFLVYQMLKGLKYIHA--AGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE--  171 (343)
T ss_pred             -CCCHHHHHhcC-C-----CCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCCEEEeecccccccccC--
Confidence             77999888753 2     8999999999999999999999  78999999999999999999999999999865432  


Q ss_pred             cceeeccceeeccCccccch--hhhhHhHhCCccccccccc
Q 019481          163 DLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEK  201 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~  201 (340)
                      .....+++.|++|+...+..  -...|+|+.|...+....+
T Consensus       172 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g  212 (343)
T cd07880         172 MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTG  212 (343)
T ss_pred             ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhC
Confidence            22345677788886443211  1234666666666555443

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.97  E-value=3.6e-31  Score=236.23  Aligned_cols=186  Identities=15%  Similarity=0.097  Sum_probs=140.0

Q ss_pred             CCCcceEEEEEEcC-------CCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCccee
Q 019481            4 SAPSFSVLIHVPFP-------DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYC   75 (340)
Q Consensus         4 ~~G~fg~V~~~~~~-------~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~   75 (340)
                      ..|+||.||+|++.       ..+..||+|..+........+.+.+|+.+++.+ +||||+++++++.       +....
T Consensus        24 g~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~-------~~~~~   96 (304)
T cd05101          24 GEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-------QDGPL   96 (304)
T ss_pred             eccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe-------cCCce
Confidence            36889999999742       234579999987544445567789999999999 8999999999664       33467


Q ss_pred             eeeeccccCCCHHHHhcccCCC-----------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC
Q 019481           76 WKNKWLMQKKGLENVHIGEHPA-----------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF  144 (340)
Q Consensus        76 ~~~~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~  144 (340)
                      ++++||+++|+|.+++......           ....+++..+..++.||++||+|||+  ++|+||||||+||+++.++
T Consensus        97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~--~givH~dlkp~Nili~~~~  174 (304)
T cd05101          97 YVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS--QKCIHRDLAARNVLVTENN  174 (304)
T ss_pred             EEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH--CCeeecccccceEEEcCCC
Confidence            8999999999999999865321           11347888999999999999999999  8899999999999999999


Q ss_pred             ceEEeccccceeecccCC---cceeeccceeeccCccccchhh-hhHhHhCCcccccc
Q 019481          145 KCNLSDFSTAKVSAVENA---DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDE  198 (340)
Q Consensus       145 ~~kl~DFGla~~~~~~~~---~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~  198 (340)
                      .+||+|||+++.......   .....++..|++|+...+..+. ..|+|+.|...+.+
T Consensus       175 ~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el  232 (304)
T cd05101         175 VMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI  232 (304)
T ss_pred             cEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHH
Confidence            999999999987654221   1122345668888654432221 23555555544433

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.97  E-value=2.9e-31  Score=235.07  Aligned_cols=186  Identities=16%  Similarity=0.123  Sum_probs=136.8

Q ss_pred             CCCcceEEEEEEcCC-----CCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPFPD-----DRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~-----~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      ..|+||.||+|.++.     .+..||+|.++..........+.+|+.+++.++||||+++++++.       +....+++
T Consensus        15 g~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-------~~~~~~lv   87 (288)
T cd05061          15 GQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS-------KGQPTLVV   87 (288)
T ss_pred             cCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc-------CCCCcEEE
Confidence            468999999997542     345799999875444444556789999999999999999999654       33467899


Q ss_pred             eccccCCCHHHHhcccCCC-----ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccc
Q 019481           79 KWLMQKKGLENVHIGEHPA-----SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFST  153 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl  153 (340)
                      |||+++|+|.+++......     .....++..+..++.|++.||.|||+  ++|+||||||+||+++.++.+||+|||+
T Consensus        88 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~--~~i~H~dikp~nili~~~~~~~L~Dfg~  165 (288)
T cd05061          88 MELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGM  165 (288)
T ss_pred             EeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh--CCCcCCCCChheEEEcCCCcEEECcCCc
Confidence            9999999999999754321     01235677899999999999999999  8899999999999999999999999999


Q ss_pred             ceeecccCC---cceeeccceeeccCccccchh-hhhHhHhCCcccccc
Q 019481          154 AKVSAVENA---DLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDE  198 (340)
Q Consensus       154 a~~~~~~~~---~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~  198 (340)
                      ++.......   .....++..|++|+...+..+ ...|+|+.|...+.+
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el  214 (288)
T cd05061         166 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI  214 (288)
T ss_pred             cccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHH
Confidence            986543221   111233455777754332111 123666655555544

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.97  E-value=6.8e-32  Score=253.73  Aligned_cols=239  Identities=16%  Similarity=0.135  Sum_probs=174.3

Q ss_pred             CCCcceEEEEEEcCC-----CCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPFPD-----DRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~-----~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      .-|+||+||+|+...     ....||||.++...+.+..++|+||++++..++|||||+|+|...       +++-.+++
T Consensus       495 GegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~-------~~~P~~Mv  567 (774)
T KOG1026|consen  495 GEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCR-------EGDPLCMV  567 (774)
T ss_pred             cCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEc-------cCCeeEEE
Confidence            369999999998643     345799999998877778899999999999999999999999432       33456689


Q ss_pred             eccccCCCHHHHhcccCCCc---------cccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEe
Q 019481           79 KWLMQKKGLENVHIGEHPAS---------VRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLS  149 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~~---------~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~  149 (340)
                      +|||..|||.++|+.+.+..         +.+++..+.+.|+.|||.|+.||-+  +.++||||-..|+||.++..|||+
T Consensus       568 FEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~--~~FVHRDLATRNCLVge~l~VKIs  645 (774)
T KOG1026|consen  568 FEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS--HHFVHRDLATRNCLVGENLVVKIS  645 (774)
T ss_pred             EEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh--CcccccchhhhhceeccceEEEec
Confidence            99999999999998776542         2338999999999999999999999  889999999999999999999999


Q ss_pred             ccccceeecccCCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccC-CchhHHH
Q 019481          150 DFSTAKVSAVENADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKT-ENETWNN  228 (340)
Q Consensus       150 DFGla~~~~~~~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~  228 (340)
                      |||++|.+-..+-..  .+. .-+-|..+++||.+++.-+         .+..|.|+     .|.+..|+-+ |..||-+
T Consensus       646 DfGLsRdiYssDYYk--~~~-~t~lPIRWMppEsIly~kF---------TteSDVWs-----~GVvLWEIFsyG~QPy~g  708 (774)
T KOG1026|consen  646 DFGLSRDIYSSDYYK--VRG-NTLLPIRWMPPESILYGKF---------TTESDVWS-----FGVVLWEIFSYGKQPYYG  708 (774)
T ss_pred             ccccchhhhhhhhhc--ccC-CceeeeecCCHHHhhcCcc---------cchhhhhh-----hhhhhhhhhccccCcccc
Confidence            999998653322111  111 1233455666676655322         23455566     5666666655 6666655


Q ss_pred             HHHHHHHHHhhhhccccccCcCCccc-------cccccccCCCCchHHHHh
Q 019481          229 FLYLLLIATLLSTITFLSALKITGCK-------SEEGYKNNSSLNPICQIV  272 (340)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~p~~~-------~~~~l~~dP~~R~t~~~l  272 (340)
                      +....++..    +.-+.....|+..       -.+|++++|.+||+..+|
T Consensus       709 lSn~EVIe~----i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI  755 (774)
T KOG1026|consen  709 LSNQEVIEC----IRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEI  755 (774)
T ss_pred             cchHHHHHH----HHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence            444332221    1222222333322       337899999999998876

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.97  E-value=2.9e-31  Score=235.23  Aligned_cols=244  Identities=16%  Similarity=0.087  Sum_probs=168.4

Q ss_pred             CCCcceEEEEEEcC---CCCceEEEEEeeccC---chhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceee
Q 019481            4 SAPSFSVLIHVPFP---DDRDDVMLKLHELIT---PLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCW   76 (340)
Q Consensus         4 ~~G~fg~V~~~~~~---~~~~~vAiK~~~~~~---~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~   76 (340)
                      +.|+||.||+|++.   .+++.||+|+++...   .....+.+.+|+++++++ +|+||+++++.|..       ....+
T Consensus         9 g~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~-------~~~~~   81 (290)
T cd05613           9 GTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT-------DTKLH   81 (290)
T ss_pred             ccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeec-------CCeEE
Confidence            47899999999874   478899999997422   123346678899999999 59999999986653       34677


Q ss_pred             eeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481           77 KNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus        77 ~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      +++||+++++|.+++.....     +++..+..++.|++.||.|||+  ++++||||||+|||++.++.+||+|||+++.
T Consensus        82 lv~e~~~~~~L~~~l~~~~~-----l~~~~~~~~~~qi~~al~~lH~--~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~  154 (290)
T cd05613          82 LILDYINGGELFTHLSQRER-----FKEQEVQIYSGEIVLALEHLHK--LGIIYRDIKLENILLDSNGHVVLTDFGLSKE  154 (290)
T ss_pred             EEEecCCCCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHeEECCCCCEEEeeCcccee
Confidence            99999999999999987665     8999999999999999999999  8899999999999999999999999999987


Q ss_pred             ecccC--CcceeeccceeeccCccccch---hhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHH
Q 019481          157 SAVEN--ADLTALDTSSVSAQSGKTGME---MKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLY  231 (340)
Q Consensus       157 ~~~~~--~~~~~~gt~~~~~p~~~~~~~---~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (340)
                      .....  ......|+..|++|+...+..   -...|+|+.|...+.+.++.  +|+......          ........
T Consensus       155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~--~p~~~~~~~----------~~~~~~~~  222 (290)
T cd05613         155 FHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGA--SPFTVDGEK----------NSQAEISR  222 (290)
T ss_pred             cccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCC--CCCCcCCcc----------ccHHHHHH
Confidence            65432  223456778888886543211   01235555555554444333  332111000          00000000


Q ss_pred             HHHHHHhhhhccccccCcCC---ccccccccccCCCCch-----HHHHhhcCccee
Q 019481          232 LLLIATLLSTITFLSALKIT---GCKSEEGYKNNSSLNP-----ICQIVNQHPFYI  279 (340)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~p---~~~~~~~l~~dP~~R~-----t~~~ll~hp~~~  279 (340)
                            .+......-....+   ..+...|++.||++|+     +++++++|||+.
T Consensus       223 ------~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~  272 (290)
T cd05613         223 ------RILKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQ  272 (290)
T ss_pred             ------HhhccCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccc
Confidence                  00000000000111   2234478999999997     789999999993

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.97  E-value=1.2e-30  Score=230.47  Aligned_cols=186  Identities=16%  Similarity=0.123  Sum_probs=143.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|++..+++.+|+|.+.... .....+.+.+|++++++++|||++++++++...     +....++++||+
T Consensus         8 ~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~~~lv~e~~   82 (287)
T cd07840           8 GEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSK-----GKGSIYMVFEYM   82 (287)
T ss_pred             ccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecC-----CCCcEEEEeccc
Confidence            35789999999999999999999998643 223345688999999999999999999966432     135788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      ++ +|.+++.....    .+++..++.++.||++||+|||+  .+++|+||||+||++++++.+||+|||++........
T Consensus        83 ~~-~l~~~~~~~~~----~~~~~~~~~i~~~i~~al~~LH~--~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~  155 (287)
T cd07840          83 DH-DLTGLLDSPEV----KFTESQIKCYMKQLLEGLQYLHS--NGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS  155 (287)
T ss_pred             cc-cHHHHHhccCC----CCCHHHHHHHHHHHHHHHHHHHH--CCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence            74 99999877632    39999999999999999999999  8899999999999999999999999999987655431


Q ss_pred             --cceeeccceeeccCccccch--hhhhHhHhCCccccccccc
Q 019481          163 --DLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEK  201 (340)
Q Consensus       163 --~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~  201 (340)
                        .....++..|++|+.+.+..  -...|+|+.|...+.+.++
T Consensus       156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~  198 (287)
T cd07840         156 ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLG  198 (287)
T ss_pred             ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhC
Confidence              12234566788886443211  1134666666555554443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.97  E-value=3e-31  Score=230.89  Aligned_cols=140  Identities=22%  Similarity=0.246  Sum_probs=119.4

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|.+. +++.+|+|++....  .....+.+|++++++++||||+++++++.       +..+.++++||++
T Consensus        13 g~G~~~~v~~~~~~-~~~~~~iK~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-------~~~~~~lv~e~~~   82 (256)
T cd05059          13 GSGQFGVVHLGKWR-GKIDVAIKMIREGA--MSEDDFIEEAKVMMKLSHPNLVQLYGVCT-------KQRPIFIVTEYMA   82 (256)
T ss_pred             ccCCCceEEEeEec-CCccEEEEEeccCC--CCHHHHHHHHHHHHhCCCCCEEEEEEEEc-------CCCceEEEEecCC
Confidence            36889999999876 46679999986422  23356788999999999999999999654       3346789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      +++|.+++.....    .+++..+..++.|++.||+|||+  ++|+||||||+||+++.++.+||+|||+++....
T Consensus        83 ~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~lH~--~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~  152 (256)
T cd05059          83 NGCLLNYLRERKG----KLGTEWLLDMCSDVCEAMEYLES--NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLD  152 (256)
T ss_pred             CCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHH--CCcccccccHhhEEECCCCcEEECCcccceeccc
Confidence            9999999986543    38999999999999999999999  8899999999999999999999999999986643

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.97  E-value=2.3e-31  Score=231.74  Aligned_cols=175  Identities=14%  Similarity=0.007  Sum_probs=134.9

Q ss_pred             CCCcceEEEEEEcCCCC----------ceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcc
Q 019481            4 SAPSFSVLIHVPFPDDR----------DDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRR   73 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~----------~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~   73 (340)
                      +.|+||.||+|.+..++          ..+++|.+.....  ....+.+|++++++++||||+++++++..        .
T Consensus         4 g~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------~   73 (259)
T cd05037           4 GQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR--DSLAFFETASLMSQLSHKHLVKLYGVCVR--------D   73 (259)
T ss_pred             cccccceEEEEEEeccCCccccCCccceeeeeeccccchh--hHHHHHHHHHHHHcCCCcchhheeeEEec--------C
Confidence            46889999999998776          3578888754322  15778899999999999999999996542        2


Q ss_pred             eeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC-------ce
Q 019481           74 YCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF-------KC  146 (340)
Q Consensus        74 ~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~-------~~  146 (340)
                      ..++++||+++|+|.+++.....    .+++..+..++.||+.||+|||+  ++|+||||||+||+++.++       .+
T Consensus        74 ~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~i~~~l~~LH~--~~i~H~dlkp~Nill~~~~~~~~~~~~~  147 (259)
T cd05037          74 ENIMVEEYVKFGPLDVFLHREKN----NVSLHWKLDVAKQLASALHYLED--KKLVHGNVCGKNILVARYGLNEGYVPFI  147 (259)
T ss_pred             CcEEEEEcCCCCcHHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHhh--CCeecccCccceEEEecCccccCCceeE
Confidence            55799999999999999987663    38999999999999999999999  8899999999999999887       79


Q ss_pred             EEeccccceeecccCCcceeeccceeeccCccccc---hhhhhHhHhCCccccc
Q 019481          147 NLSDFSTAKVSAVENADLTALDTSSVSAQSGKTGM---EMKMAQLESGGWRAHD  197 (340)
Q Consensus       147 kl~DFGla~~~~~~~~~~~~~gt~~~~~p~~~~~~---~~~~~~~~s~g~~~~~  197 (340)
                      ||+|||+++....   .....++..|++|+.+.+.   --...|+|+.|...+.
T Consensus       148 kl~Dfg~a~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~  198 (259)
T cd05037         148 KLSDPGIPITVLS---REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLE  198 (259)
T ss_pred             EeCCCCccccccc---ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHH
Confidence            9999999987544   1223455667777644332   1112355555544443

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.97  E-value=3.7e-31  Score=234.35  Aligned_cols=185  Identities=15%  Similarity=0.133  Sum_probs=136.8

Q ss_pred             CCCcceEEEEEEc-----CCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPF-----PDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~-----~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      ..|+||.||++.+     ..++..+|+|.+.... ....+.+.+|++++++++||||+++++++.       +....+++
T Consensus        14 g~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv   85 (288)
T cd05093          14 GEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCV-------EGDPLIMV   85 (288)
T ss_pred             CCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEe-------cCCccEEE
Confidence            4688999999985     3345679999986432 344567899999999999999999999765       33467899


Q ss_pred             eccccCCCHHHHhcccCCC--------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEec
Q 019481           79 KWLMQKKGLENVHIGEHPA--------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSD  150 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~--------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~D  150 (340)
                      +||+++|+|.+++...+..        ....+++..+..++.|++.||+|||+  ++++||||||+||+++.++.+||+|
T Consensus        86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~--~~i~H~dlkp~Nili~~~~~~kl~d  163 (288)
T cd05093          86 FEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS--QHFVHRDLATRNCLVGENLLVKIGD  163 (288)
T ss_pred             EEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh--CCeeecccCcceEEEccCCcEEecc
Confidence            9999999999999754320        11248999999999999999999999  8899999999999999999999999


Q ss_pred             cccceeecccCC---cceeeccceeeccCccccchhh-hhHhHhCCcccccc
Q 019481          151 FSTAKVSAVENA---DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDE  198 (340)
Q Consensus       151 FGla~~~~~~~~---~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~  198 (340)
                      ||+++.......   .....++..|+||+...+.... ..|+|+.|...+.+
T Consensus       164 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l  215 (288)
T cd05093         164 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI  215 (288)
T ss_pred             CCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHH
Confidence            999986543221   1122235567777533322111 23555544444443

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.97  E-value=4.9e-31  Score=229.54  Aligned_cols=143  Identities=17%  Similarity=0.138  Sum_probs=123.7

Q ss_pred             CCCcceEEEEEEcCC-CCc--eEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPD-DRD--DVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~-~~~--~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      +.|++|.||+|.+.. +++  .||+|.+.........+.+.+|++++++++||||+++++.+..        ...++++|
T Consensus         4 g~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--------~~~~~v~e   75 (257)
T cd05040           4 GDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT--------HPLMMVTE   75 (257)
T ss_pred             CccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC--------CeEEEEEE
Confidence            468999999999755 333  6999999864433566789999999999999999999996642        47789999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      |+++|+|.+.+.+...   ..+++..+..++.|++.||+|||+  ++++||||||+||+++.++.+||+|||+++.+..
T Consensus        76 ~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~--~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~  149 (257)
T cd05040          76 LAPLGSLLDRLRKDAL---GHFLISTLCDYAVQIANGMRYLES--KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQ  149 (257)
T ss_pred             ecCCCcHHHHHHhccc---ccCcHHHHHHHHHHHHHHHHHHHh--CCccccccCcccEEEecCCEEEeccccccccccc
Confidence            9999999999987652   248999999999999999999999  8899999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.97  E-value=3.8e-31  Score=236.04  Aligned_cols=180  Identities=13%  Similarity=0.123  Sum_probs=135.2

Q ss_pred             CCCcceEEEEEEcCCCCc----eEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            4 SAPSFSVLIHVPFPDDRD----DVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~----~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      ..|+||.||+|++..+++    .||+|.+...........+.+|+.++++++||||+++++++...        ..++++
T Consensus        16 g~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~--------~~~~v~   87 (303)
T cd05110          16 GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP--------TIQLVT   87 (303)
T ss_pred             ccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC--------Cceeee
Confidence            468899999999877775    47889887544444445688999999999999999999966422        345789


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      ||+++|+|.+++.....    .+++..+..++.|++.||+|||+  ++|+||||||+||+++.++.+||+|||+++....
T Consensus        88 e~~~~g~l~~~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~--~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~  161 (303)
T cd05110          88 QLMPHGCLLDYVHEHKD----NIGSQLLLNWCVQIAKGMMYLEE--RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG  161 (303)
T ss_pred             hhcCCCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHhh--cCeeccccccceeeecCCCceEEccccccccccC
Confidence            99999999999987553    38999999999999999999999  8899999999999999999999999999987654


Q ss_pred             cCCcc---eeeccceeeccCccccchhh-hhHhHhCCccccc
Q 019481          160 ENADL---TALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHD  197 (340)
Q Consensus       160 ~~~~~---~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~  197 (340)
                      .....   ...++..|++|+...+.+.. ..|+|+.|...+.
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~e  203 (303)
T cd05110         162 DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWE  203 (303)
T ss_pred             cccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHH
Confidence            32211   12234556666533221111 2355555544443

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=4e-31  Score=230.71  Aligned_cols=141  Identities=20%  Similarity=0.257  Sum_probs=120.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|.+.. ++.||+|.++...  ...+.+.+|++++++++||||+++++++.       +.+..++++||++
T Consensus        15 g~g~~~~v~~~~~~~-~~~v~iK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~~~   84 (261)
T cd05068          15 GAGQFGEVWEGLWNN-TTPVAVKTLKPGT--MDPKDFLAEAQIMKKLRHPKLIQLYAVCT-------LEEPIYIVTELMK   84 (261)
T ss_pred             cccCCccEEEEEecC-CeEEEEEeeCCCc--ccHHHHHHHHHHHHHCCCCCccceeEEEe-------cCCCeeeeeeccc
Confidence            368899999999754 5679999986422  23466889999999999999999999664       3346789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      +++|.+++.....   ..+++..+..++.|++.||.|||+  ++|+||||||+||+++.++.+||+|||+++....
T Consensus        85 ~~~L~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~  155 (261)
T cd05068          85 YGSLLEYLQGGAG---RALKLPQLIDMAAQVASGMAYLEA--QNYIHRDLAARNVLVGENNICKVADFGLARVIKE  155 (261)
T ss_pred             CCcHHHHHhccCC---CCCCHHHHHHHHHHHHHHHHHHHh--CCeeeccCCcceEEEcCCCCEEECCcceEEEccC
Confidence            9999999987652   348999999999999999999999  8899999999999999999999999999987753

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.97  E-value=5.6e-31  Score=230.96  Aligned_cols=160  Identities=19%  Similarity=0.136  Sum_probs=128.5

Q ss_pred             CCCcceEEEEEEcCCC---CceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDD---RDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~---~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      +.|+||.||+|.+..+   ...||+|...........+.+.+|++++++++||||+++++++...        ..++++|
T Consensus        15 g~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--------~~~lv~e   86 (270)
T cd05056          15 GEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN--------PVWIVME   86 (270)
T ss_pred             CCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC--------CcEEEEE
Confidence            4699999999987544   4568999987554455567889999999999999999999966422        4568999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      |+++|+|.+++.....    .+++..+..++.|++.||+|||+  .+++||||||+||+++.++.+||+|||+++.....
T Consensus        87 ~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~l~~~l~~lH~--~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~  160 (270)
T cd05056          87 LAPLGELRSYLQVNKY----SLDLASLILYSYQLSTALAYLES--KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE  160 (270)
T ss_pred             cCCCCcHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHh--CCeeccccChheEEEecCCCeEEccCceeeecccc
Confidence            9999999999987543    38999999999999999999999  77999999999999999999999999999876443


Q ss_pred             CCc--ceeeccceeeccCc
Q 019481          161 NAD--LTALDTSSVSAQSG  177 (340)
Q Consensus       161 ~~~--~~~~gt~~~~~p~~  177 (340)
                      ...  ....++..|++|+.
T Consensus       161 ~~~~~~~~~~~~~y~aPE~  179 (270)
T cd05056         161 SYYKASKGKLPIKWMAPES  179 (270)
T ss_pred             cceecCCCCccccccChhh
Confidence            211  11122345666753

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.97  E-value=1.1e-30  Score=231.96  Aligned_cols=186  Identities=16%  Similarity=0.112  Sum_probs=140.1

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc-hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP-LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      +.|++|.||+|++..+++.||+|.+..... ....+.+.+|++++++++||||+++++++.       +..+.++++||+
T Consensus        11 ~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~~   83 (294)
T PLN00009         11 GEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVH-------SEKRLYLVFEYL   83 (294)
T ss_pred             cCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEe-------cCCeEEEEEecc
Confidence            458899999999999999999999865322 233456788999999999999999999765       334788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC-CCceEEeccccceeecccC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE-TFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~-~~~~kl~DFGla~~~~~~~  161 (340)
                      + ++|.+++.....   ..+++..+..++.||+.||+|||+  ++++||||||+||+++. ++.+||+|||+++......
T Consensus        84 ~-~~l~~~~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~--~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~  157 (294)
T PLN00009         84 D-LDLKKHMDSSPD---FAKNPRLIKTYLYQILRGIAYCHS--HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV  157 (294)
T ss_pred             c-ccHHHHHHhCCC---CCcCHHHHHHHHHHHHHHHHHHHh--CCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence            6 588888866543   236888999999999999999999  88999999999999985 5679999999997654322


Q ss_pred             C-cceeeccceeeccCccccch--hhhhHhHhCCcccccccccc
Q 019481          162 A-DLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       162 ~-~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~  202 (340)
                      . .....++..|++|+.+.+..  -...|+|+.|...+.+.++.
T Consensus       158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~  201 (294)
T PLN00009        158 RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQK  201 (294)
T ss_pred             cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            1 22335567788876443211  11346666666555554443

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.97  E-value=4.2e-31  Score=229.93  Aligned_cols=155  Identities=17%  Similarity=0.168  Sum_probs=125.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||++...  ++.||+|..+..   ...+.+.+|+.++++++|+||+++++++.      .+....++++||++
T Consensus        15 g~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~------~~~~~~~lv~e~~~   83 (256)
T cd05082          15 GKGEFGDVMLGDYR--GNKVAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIV------EEKGGLYIVTEYMA   83 (256)
T ss_pred             cccCCCeEEEEEEc--CCcEEEEEeCCC---chHHHHHHHHHHHHhCCCCCeeeEEEEEE------cCCCceEEEEECCC
Confidence            35779999999764  677999998632   23456889999999999999999998542      23346789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +|+|.++++....   ..+++..+..++.|++.||+|||+  ++++||||||+||+++.++.+||+|||+++......  
T Consensus        84 ~~~L~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--  156 (256)
T cd05082          84 KGSLVDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLEA--NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--  156 (256)
T ss_pred             CCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHh--CCEeccccchheEEEcCCCcEEecCCccceeccccC--
Confidence            9999999987553   348899999999999999999999  889999999999999999999999999998654322  


Q ss_pred             ceeeccceeeccC
Q 019481          164 LTALDTSSVSAQS  176 (340)
Q Consensus       164 ~~~~gt~~~~~p~  176 (340)
                      .+..++..|++|+
T Consensus       157 ~~~~~~~~y~aPE  169 (256)
T cd05082         157 DTGKLPVKWTAPE  169 (256)
T ss_pred             CCCccceeecCHH
Confidence            2223345577775

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.97  E-value=4e-30  Score=225.38  Aligned_cols=165  Identities=12%  Similarity=0.031  Sum_probs=127.3

Q ss_pred             CCCcceEEEEEEcCCC--CceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDD--RDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~--~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|....+  ...+++|.++........+.+.+|+.+++.++||||+++++.+..       ....+++|||
T Consensus         4 g~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~-------~~~~~lv~e~   76 (268)
T cd05086           4 GNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVE-------AIPYLLVFEY   76 (268)
T ss_pred             CCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecC-------CCccEEEEec
Confidence            3688999999975433  335667776654444556789999999999999999999996653       3367799999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+++++.... ....++..+..++.||+.||+|||+  .+++||||||+|||++.++.+||+|||++.......
T Consensus        77 ~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~--~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~  153 (268)
T cd05086          77 CELGDLKSYLSQEQWH-RRNSQLLLLQRMACEIAAGVTHMHK--HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKED  153 (268)
T ss_pred             CCCCcHHHHHHhhhcc-cccccHHHHHHHHHHHHHHHHHHHH--CCeeccCCccceEEEcCCccEEecccccccccCcch
Confidence            9999999999864321 1236778889999999999999999  779999999999999999999999999986432211


Q ss_pred             ---CcceeeccceeeccCcc
Q 019481          162 ---ADLTALDTSSVSAQSGK  178 (340)
Q Consensus       162 ---~~~~~~gt~~~~~p~~~  178 (340)
                         .....+++..|++|+..
T Consensus       154 ~~~~~~~~~~~~~y~aPE~~  173 (268)
T cd05086         154 YIETEDDKCVPLRWLAPELV  173 (268)
T ss_pred             hhhcccCCcCcccccCchhc
Confidence               11234566777777543

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.3e-31  Score=227.19  Aligned_cols=232  Identities=17%  Similarity=0.193  Sum_probs=180.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc--CchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI--TPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+|+.|..+++++|.+.+|+|+++++  ...++.+-++.|-.+..+- +||.+|.|+..|++.+       ..+.|.||
T Consensus       260 rgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtes-------rlffviey  332 (593)
T KOG0695|consen  260 RGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTES-------RLFFVIEY  332 (593)
T ss_pred             CcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccc-------eEEEEEEE
Confidence            589999999999999999999999873  3334556678888887776 6999999999888665       55688999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee-eccc
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV-SAVE  160 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~-~~~~  160 (340)
                      ++||+|.-+++++.+     ++|+.++.+..+|+.||.|||+  +|||.||||.+|+|+|..|++||+|+|+++. +.++
T Consensus       333 v~ggdlmfhmqrqrk-----lpeeharfys~ei~lal~flh~--rgiiyrdlkldnvlldaeghikltdygmcke~l~~g  405 (593)
T KOG0695|consen  333 VNGGDLMFHMQRQRK-----LPEEHARFYSAEICLALNFLHE--RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPG  405 (593)
T ss_pred             ecCcceeeehhhhhc-----CcHHHhhhhhHHHHHHHHHHhh--cCeeeeeccccceEEccCCceeecccchhhcCCCCC
Confidence            999999999999887     9999999999999999999999  8899999999999999999999999999985 5567


Q ss_pred             CCcceeeccceeeccC-----------ccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHH
Q 019481          161 NADLTALDTSSVSAQS-----------GKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNF  229 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~-----------~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (340)
                      +...++||||.|.||+           ++|+.++.|.++..|..++...+.              --+++.+.     ++
T Consensus       406 d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm--------------~n~d~nte-----dy  466 (593)
T KOG0695|consen  406 DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGM--------------DNPDMNTE-----DY  466 (593)
T ss_pred             cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecC--------------CCcccchh-----HH
Confidence            7889999999999995           667777777777774433321111              11112221     22


Q ss_pred             HHHHHHHHhhhhccccccCcCCccccc-------cccccCCCCchHH------HHhhcCcce
Q 019481          230 LYLLLIATLLSTITFLSALKITGCKSE-------EGYKNNSSLNPIC------QIVNQHPFY  278 (340)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-------~~l~~dP~~R~t~------~~ll~hp~~  278 (340)
                      .....+.         ....+|..+|-       ..|++||.+|.-+      .++..|+|+
T Consensus       467 lfqvile---------kqiriprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ff  519 (593)
T KOG0695|consen  467 LFQVILE---------KQIRIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFF  519 (593)
T ss_pred             HHHHHhh---------hcccccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhh
Confidence            2222211         12455555544       3499999999653      588999999

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.97  E-value=7.6e-31  Score=229.79  Aligned_cols=143  Identities=16%  Similarity=0.209  Sum_probs=123.0

Q ss_pred             CCCcceEEEEEEcCCCCc---eEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRD---DVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~---~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.||+|+++.+++   .+|+|.++........+.+.+|++++++++||||+++.+++.       +.+..++++|
T Consensus        14 g~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e   86 (268)
T cd05063          14 GAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVT-------KFKPAMIITE   86 (268)
T ss_pred             cCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEc-------cCCCcEEEEE
Confidence            368899999999876554   799999875444455677899999999999999999999664       3346779999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      |+++++|.+++.....    .+++..+..++.|++.||+|||+  .+++||||||+||+++.++.+||+|||+++....
T Consensus        87 ~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~l~~al~~lH~--~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~  159 (268)
T cd05063          87 YMENGALDKYLRDHDG----EFSSYQLVGMLRGIAAGMKYLSD--MNYVHRDLAARNILVNSNLECKVSDFGLSRVLED  159 (268)
T ss_pred             cCCCCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHH--CCeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence            9999999999976543    38999999999999999999999  7899999999999999999999999999986654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.97  E-value=5e-30  Score=226.66  Aligned_cols=165  Identities=16%  Similarity=0.125  Sum_probs=130.4

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCch-hhHHHHHHHHHHhhhc---CCCccccccccccccccccCCcceeeeee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPL-QLRRDDDGKLDSLEEI---FHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~~E~~~l~~l---~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      ..|+||.||+|+++.+++.||+|.++..... .....+.+|+++++++   +||||+++++++.....  .+....++++
T Consensus         8 ~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~--~~~~~~~l~~   85 (287)
T cd07838           8 GEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRT--DRELKLTLVF   85 (287)
T ss_pred             cccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccC--CCCceeEEEe
Confidence            4688999999999988999999999753222 2234566788877666   59999999997764321  1222477999


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      ||+. ++|.+++.....   ..+++..++.++.|+++||+|||+  .+++|+||||+||+++.++.+||+|||++.....
T Consensus        86 e~~~-~~l~~~l~~~~~---~~l~~~~~~~~~~~i~~al~~LH~--~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~  159 (287)
T cd07838          86 EHVD-QDLATYLSKCPK---PGLPPETIKDLMRQLLRGVDFLHS--HRIVHRDLKPQNILVTSDGQVKIADFGLARIYSF  159 (287)
T ss_pred             hhcc-cCHHHHHHHccC---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeeccCChhhEEEccCCCEEEeccCcceeccC
Confidence            9997 489998876543   248999999999999999999999  7899999999999999999999999999988765


Q ss_pred             cCCcceeeccceeeccC
Q 019481          160 ENADLTALDTSSVSAQS  176 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~  176 (340)
                      ........++..|++|+
T Consensus       160 ~~~~~~~~~~~~~~~PE  176 (287)
T cd07838         160 EMALTSVVVTLWYRAPE  176 (287)
T ss_pred             CcccccccccccccChH
Confidence            44434445677777774

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.97  E-value=5.8e-31  Score=238.79  Aligned_cols=188  Identities=17%  Similarity=0.158  Sum_probs=139.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCcccccccccccccc-------ccCCcceeee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNIC-------LTGDRRYCWK   77 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~-------~~~~~~~~~~   77 (340)
                      .|+||.||+|++..+++.||+|.+..... ...+.+.+|++++++++||||+++++.+.....       ...+...+++
T Consensus        15 ~g~~g~vy~~~~~~~~~~v~iK~i~~~~~-~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   93 (342)
T cd07854          15 CGSNGLVFSAVDSDCDKRVAVKKIVLTDP-QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYI   93 (342)
T ss_pred             CCCCEEEEEEEECCCCcEEEEEEEecCCC-chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEE
Confidence            58899999999999999999999875432 445668899999999999999999987654321       1122346789


Q ss_pred             eeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC-CCceEEecccccee
Q 019481           78 NKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE-TFKCNLSDFSTAKV  156 (340)
Q Consensus        78 ~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~-~~~~kl~DFGla~~  156 (340)
                      ++||++ ++|.+.+... .     +++..++.++.||++||+|||+  .+|+||||||+||+++. ++.+||+|||+++.
T Consensus        94 v~e~~~-~~L~~~~~~~-~-----l~~~~~~~~~~qi~~aL~~LH~--~givH~dikp~Nili~~~~~~~kl~dfg~~~~  164 (342)
T cd07854          94 VQEYME-TDLANVLEQG-P-----LSEEHARLFMYQLLRGLKYIHS--ANVLHRDLKPANVFINTEDLVLKIGDFGLARI  164 (342)
T ss_pred             Eeeccc-ccHHHHHHcC-C-----CCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEEEcCCCceEEECCccccee
Confidence            999997 5998888643 2     8999999999999999999999  77999999999999985 56799999999986


Q ss_pred             ecccCCc----ceeeccceeeccCccccchh--hhhHhHhCCcccccccccc
Q 019481          157 SAVENAD----LTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       157 ~~~~~~~----~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~~  202 (340)
                      .......    ....|+..|+||+.+.+...  ...|+|+.|...+.+..+.
T Consensus       165 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~  216 (342)
T cd07854         165 VDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK  216 (342)
T ss_pred             cCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCC
Confidence            6432111    12246677777764322111  1245666555555544333

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.97  E-value=5.8e-31  Score=239.02  Aligned_cols=187  Identities=16%  Similarity=0.123  Sum_probs=142.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .+|+||.||+|.+..+++.||+|+++.. ......+.+.+|++++++++||||++++++|...... ......+++++++
T Consensus        26 g~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~-~~~~~~~lv~~~~  104 (345)
T cd07877          26 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL-EEFNDVYLVTHLM  104 (345)
T ss_pred             eecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccc-cccccEEEEehhc
Confidence            3689999999999999999999998752 2223346678899999999999999999977543221 1223466788887


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                       +++|.+++... .     +++..+..++.|+++||+|||+  ++|+||||||+||+++.++.+||+|||+++.....  
T Consensus       105 -~~~L~~~~~~~-~-----l~~~~~~~i~~qi~~aL~~LH~--~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~--  173 (345)
T cd07877         105 -GADLNNIVKCQ-K-----LTDDHVQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--  173 (345)
T ss_pred             -ccCHHHHHhcC-C-----CCHHHHHHHHHHHHHHHHHHHH--CCeeecCCChHHEEEcCCCCEEEeccccccccccc--
Confidence             78999888653 2     8999999999999999999999  88999999999999999999999999999765432  


Q ss_pred             cceeeccceeeccCccccch--hhhhHhHhCCcccccccccc
Q 019481          163 DLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~  202 (340)
                      .....|+..|++|+.+.+..  -...|+|+.|...+.+..+.
T Consensus       174 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~  215 (345)
T cd07877         174 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR  215 (345)
T ss_pred             ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCC
Confidence            23446777788886443211  11246666666665554443

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.97  E-value=4.2e-31  Score=239.24  Aligned_cols=185  Identities=20%  Similarity=0.144  Sum_probs=143.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|.+..+++.+|+|.+... ........+.+|+++++++ +||||++++++|..     .+....++++||
T Consensus        16 g~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~-----~~~~~~~lv~e~   90 (337)
T cd07852          16 GKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKA-----ENDKDIYLVFEY   90 (337)
T ss_pred             cCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeecc-----CCCceEEEEecc
Confidence            3689999999999989999999988542 2223345677899999999 99999999997642     234467899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      ++ ++|.+++... .     +++..+..++.||+.||+|||+  ++|+||||||+||+++.++.+||+|||+++......
T Consensus        91 ~~-~~L~~~~~~~-~-----~~~~~~~~i~~qi~~~L~~LH~--~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~  161 (337)
T cd07852          91 ME-TDLHAVIRAN-I-----LEDVHKRYIMYQLLKALKYIHS--GNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELE  161 (337)
T ss_pred             cc-cCHHHHHhcC-C-----CCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEEcCCCcEEEeeccchhcccccc
Confidence            97 5999998765 3     8899999999999999999999  779999999999999999999999999998664432


Q ss_pred             ------CcceeeccceeeccCccccchh--hhhHhHhCCcccccccccc
Q 019481          162 ------ADLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       162 ------~~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~~  202 (340)
                            ......||..|++|+.+.+.+.  ...|+|+.|...+.+.++.
T Consensus       162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~  210 (337)
T cd07852         162 ENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGK  210 (337)
T ss_pred             ccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCC
Confidence                  1223467888888875432111  1346666666665554443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=6.7e-31  Score=228.58  Aligned_cols=176  Identities=17%  Similarity=0.180  Sum_probs=135.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|...  ++.||+|.++....  ..+.+.+|+.++++++|+||+++++++.       +....++++||++
T Consensus        15 g~g~~g~v~~~~~~--~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~-------~~~~~~~v~e~~~   83 (256)
T cd05039          15 GKGEFGDVMLGDYR--GQKVAVKCLKDDST--AAQAFLAEASVMTTLRHPNLVQLLGVVL-------QGNPLYIVTEYMA   83 (256)
T ss_pred             ecCCCceEEEEEec--CcEEEEEEeccchh--HHHHHHHHHHHHHhcCCcceeeeEEEEc-------CCCCeEEEEEecC
Confidence            36899999999864  68899999975332  4677899999999999999999999664       2346779999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +++|.+++.....   ..+++..+..++.|++.||.|||+  ++++||||||+||+++.++.+||+|||.++....... 
T Consensus        84 ~~~L~~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lh~--~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~-  157 (256)
T cd05039          84 KGSLVDYLRSRGR---AVITLAQQLGFALDVCEGMEYLEE--KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD-  157 (256)
T ss_pred             CCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHh--CCccchhcccceEEEeCCCCEEEcccccccccccccc-
Confidence            9999999987653   248999999999999999999999  8899999999999999999999999999987643221 


Q ss_pred             ceeeccceeeccCccccchhh-hhHhHhCCccccc
Q 019481          164 LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHD  197 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~  197 (340)
                       ...++..|++|+...+.... ..|+|+.|...+.
T Consensus       158 -~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~  191 (256)
T cd05039         158 -SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWE  191 (256)
T ss_pred             -cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHH
Confidence             22234456666533211111 2355555544443

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.97  E-value=8.7e-31  Score=237.64  Aligned_cols=185  Identities=16%  Similarity=0.125  Sum_probs=141.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|.+.... .......+.+|++++++++||||++++++|....... +....++++||+.
T Consensus        25 ~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~-~~~~~~lv~e~~~  103 (342)
T cd07879          25 SGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGD-EFQDFYLVMPYMQ  103 (342)
T ss_pred             ecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCC-CCceEEEEecccc
Confidence            5889999999999999999999987522 2223456789999999999999999999886543221 2234578999996


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                       .+|.++..  .     .+++..+..++.|++.||+|||+  ++|+||||||+||+++.++.+||+|||+++.....  .
T Consensus       104 -~~l~~~~~--~-----~~~~~~~~~~~~qi~~aL~~LH~--~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~--~  171 (342)
T cd07879         104 -TDLQKIMG--H-----PLSEDKVQYLVYQMLCGLKYIHS--AGIIHRDLKPGNLAVNEDCELKILDFGLARHADAE--M  171 (342)
T ss_pred             -cCHHHHHc--C-----CCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC--C
Confidence             47877653  1     28999999999999999999999  88999999999999999999999999999765332  2


Q ss_pred             ceeeccceeeccCccccch--hhhhHhHhCCcccccccccc
Q 019481          164 LTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~  202 (340)
                      ....++..|++|+...+..  -...|+|+.|...+.+.++.
T Consensus       172 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~  212 (342)
T cd07879         172 TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGK  212 (342)
T ss_pred             CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCC
Confidence            3446778888887543311  12346777666666655444

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.97  E-value=6.9e-31  Score=229.11  Aligned_cols=179  Identities=15%  Similarity=0.140  Sum_probs=133.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|.+..++ .+|+|.+....  ...+.+.+|++++++++||||+++++++.        ....+++|||++
T Consensus        15 g~g~~~~v~~~~~~~~~-~~~lK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------~~~~~~v~e~~~   83 (260)
T cd05069          15 GQGCFGEVWMGTWNGTT-KVAIKTLKPGT--MMPEAFLQEAQIMKKLRHDKLVPLYAVVS--------EEPIYIVTEFMG   83 (260)
T ss_pred             cCcCCCeEEEEEEcCCc-eEEEEEcccCC--ccHHHHHHHHHHHHhCCCCCeeeEEEEEc--------CCCcEEEEEcCC
Confidence            36889999999986654 58999876422  23456889999999999999999998553        225679999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +|+|.+++.....   ..+++..+..++.|++.||.|||+  .+++||||||+||+++.++.+||+|||+++........
T Consensus        84 ~~~L~~~~~~~~~---~~~~~~~~~~~~~~l~~al~~lH~--~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~  158 (260)
T cd05069          84 KGSLLDFLKEGDG---KYLKLPQLVDMAAQIADGMAYIER--MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT  158 (260)
T ss_pred             CCCHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHh--CCEeecccCcceEEEcCCCeEEECCCccceEccCCccc
Confidence            9999999976543   348899999999999999999999  77999999999999999999999999999876443211


Q ss_pred             --ceeeccceeeccCccccchh-hhhHhHhCCcccccc
Q 019481          164 --LTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDE  198 (340)
Q Consensus       164 --~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~  198 (340)
                        ....++..|++|+...+... ...|+|+.|...+.+
T Consensus       159 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el  196 (260)
T cd05069         159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL  196 (260)
T ss_pred             ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHH
Confidence              11223455666652221111 123555555555444

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.97  E-value=8.8e-31  Score=236.88  Aligned_cols=166  Identities=16%  Similarity=0.122  Sum_probs=129.6

Q ss_pred             CCCcceEEEEEEcCC-------CCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCccee
Q 019481            4 SAPSFSVLIHVPFPD-------DRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYC   75 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~-------~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~   75 (340)
                      ..|+||.||+|++..       .+..||+|.++........+.+.+|+++++++ +||||+++++++.       +....
T Consensus        21 g~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-------~~~~~   93 (334)
T cd05100          21 GEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACT-------QDGPL   93 (334)
T ss_pred             ccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc-------cCCce
Confidence            468899999998643       22368999987544455567889999999999 7999999999664       33467


Q ss_pred             eeeeccccCCCHHHHhcccCCC-----------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC
Q 019481           76 WKNKWLMQKKGLENVHIGEHPA-----------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF  144 (340)
Q Consensus        76 ~~~~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~  144 (340)
                      ++++||+++|+|.+++......           ....+++..+..++.|++.||+|||+  ++|+||||||+|||++.++
T Consensus        94 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~--~givH~dlkp~Nill~~~~  171 (334)
T cd05100          94 YVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS--QKCIHRDLAARNVLVTEDN  171 (334)
T ss_pred             EEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH--CCeeccccccceEEEcCCC
Confidence            8999999999999999764320           12347889999999999999999999  8899999999999999999


Q ss_pred             ceEEeccccceeecccCC---cceeeccceeeccCcc
Q 019481          145 KCNLSDFSTAKVSAVENA---DLTALDTSSVSAQSGK  178 (340)
Q Consensus       145 ~~kl~DFGla~~~~~~~~---~~~~~gt~~~~~p~~~  178 (340)
                      .+||+|||+++.......   .....++..|++|+.+
T Consensus       172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  208 (334)
T cd05100         172 VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEAL  208 (334)
T ss_pred             cEEECCcccceecccccccccccCCCcCceEcCHHHh
Confidence            999999999987644221   1112234557777543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.97  E-value=7e-32  Score=235.17  Aligned_cols=177  Identities=15%  Similarity=0.058  Sum_probs=134.5

Q ss_pred             CCCcceEEEEEEcCCCCc-------eEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceee
Q 019481            4 SAPSFSVLIHVPFPDDRD-------DVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCW   76 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~-------~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~   76 (340)
                      ..|+||.||+|.+..++.       .+|+|...... ....+.+.+|+.+++.++||||+++++++..       ....+
T Consensus         4 g~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-------~~~~~   75 (258)
T cd05078           4 GQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH-RNYSESFFEAASMMSQLSHKHLVLNYGVCVC-------GDESI   75 (258)
T ss_pred             CcccchhheeeeecccccccccccchhhHHhhcchh-HHHHHHHHHHHHHHHhCCCCChhheeeEEEe-------CCCcE
Confidence            468899999999865443       48888886422 3345678889999999999999999997653       23567


Q ss_pred             eeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCc--------eEE
Q 019481           77 KNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFK--------CNL  148 (340)
Q Consensus        77 ~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~--------~kl  148 (340)
                      ++|||+++|+|.+++.....    .+++..+..++.||+.||+|||+  ++|+||||||+||+++.++.        +|+
T Consensus        76 lv~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~--~~iiH~dlkp~nili~~~~~~~~~~~~~~~l  149 (258)
T cd05078          76 MVQEYVKFGSLDTYLKKNKN----LINISWKLEVAKQLAWALHFLED--KGLTHGNVCAKNVLLIREEDRKTGNPPFIKL  149 (258)
T ss_pred             EEEecCCCCcHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCccceEEEecccccccCCCceEEe
Confidence            89999999999999987653    38999999999999999999999  88999999999999987765        699


Q ss_pred             eccccceeecccCCcceeeccceeeccCccccchh--hhhHhHhCCccccc
Q 019481          149 SDFSTAKVSAVENADLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHD  197 (340)
Q Consensus       149 ~DFGla~~~~~~~~~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~  197 (340)
                      +|||++......   ....++..|++|+.+.+...  ...|+|+.|...+.
T Consensus       150 ~d~g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~  197 (258)
T cd05078         150 SDPGISITVLPK---EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWE  197 (258)
T ss_pred             cccccccccCCc---hhccccCCccCchhccCCCCCCchhhHHHHHHHHHH
Confidence            999998755432   23456777888865443221  12345554444433

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.97  E-value=9.6e-32  Score=218.93  Aligned_cols=250  Identities=14%  Similarity=0.050  Sum_probs=172.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      -|||+-||+++...+++.||+|.+.... .++.+..++|++..++++|||+++++++-..+.  .+.....|++++|...
T Consensus        31 eGGfsfv~LV~~~s~~~~YAlKkI~c~~-~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~--~D~~~~~yll~Pyy~~  107 (302)
T KOG2345|consen   31 EGGFSFVDLVKGLSTGHLYALKKILCHS-QEDIEEALREIDNHRKFNSPNVLRLVDHQLREE--KDGKHEAYLLLPYYKR  107 (302)
T ss_pred             CCCceeeeeecccCcccchhhheeeccc-hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhh--ccCceeEEEEeehhcc
Confidence            5889999999999999999999998644 567788999999999999999999998554321  1233468899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc-
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD-  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~-  163 (340)
                      |||.+.+...... +..++|.++..|+.+|++||++||+...+.+||||||.|||+.+.+.++|.|||.+....-.-.. 
T Consensus       108 Gsl~d~i~~~k~k-g~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~  186 (302)
T KOG2345|consen  108 GSLLDEIERLKIK-GNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGS  186 (302)
T ss_pred             ccHHHHHHHHhhc-CCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccceEeech
Confidence            9999999876542 23599999999999999999999994345999999999999999999999999998754321111 


Q ss_pred             ---------ceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHH
Q 019481          164 ---------LTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLL  234 (340)
Q Consensus       164 ---------~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (340)
                               ....-|..|.|||-      +....   +.   ......+.|+     +||+...|.-+..||+...+...
T Consensus       187 ~~a~~lQe~a~e~Ct~pyRAPEL------f~vk~---~~---ti~ertDIWS-----LGCtLYa~mf~~sPfe~~~~~Gg  249 (302)
T KOG2345|consen  187 RQALRLQEWAEERCTIPYRAPEL------FNVKS---HC---TITERTDIWS-----LGCTLYAMMFGESPFERIYQQGG  249 (302)
T ss_pred             HHHHHHHHHHHHhCCCcccCchh------eeccc---Cc---ccccccchhh-----hhHHHHHHHHcCCcchHHhhcCC
Confidence                     01123555777742      21110   00   1122333455     55555555555555554333210


Q ss_pred             ---HHHhhhhccccccCcCCccc---cccccccCCCCchHHHHhhcC
Q 019481          235 ---IATLLSTITFLSALKITGCK---SEEGYKNNSSLNPICQIVNQH  275 (340)
Q Consensus       235 ---~~~~~~~~~~~~~~~~p~~~---~~~~l~~dP~~R~t~~~ll~h  275 (340)
                         .+.+...+.+......++.+   ...|++.||.+||++.+|+.+
T Consensus       250 SlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  250 SLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             eEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence               01111122232222233332   336799999999999988754

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.97  E-value=8.5e-31  Score=232.42  Aligned_cols=184  Identities=16%  Similarity=0.142  Sum_probs=136.9

Q ss_pred             CCCcceEEEEEEcC-----CCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPFP-----DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      ..|+||.||+|++.     .++..+|+|.+.... ....+.+.+|++++++++||||+++++++.       +....+++
T Consensus        14 g~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv   85 (291)
T cd05094          14 GEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT-LAARKDFQREAELLTNLQHEHIVKFYGVCG-------DGDPLIMV   85 (291)
T ss_pred             cccCCCeEEEeEeeccCCCCcceeeEEEecCCcc-HHHHHHHHHHHHHHhcCCCCCcceEEEEEc-------cCCceEEE
Confidence            35889999999853     345678999986422 334467889999999999999999999664       33467899


Q ss_pred             eccccCCCHHHHhcccCCC-----------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceE
Q 019481           79 KWLMQKKGLENVHIGEHPA-----------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCN  147 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~k  147 (340)
                      |||+++++|.+++......           ....+++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+|
T Consensus        86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~--~~i~H~dlkp~Nil~~~~~~~~  163 (291)
T cd05094          86 FEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS--QHFVHRDLATRNCLVGANLLVK  163 (291)
T ss_pred             EecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh--CCeeecccCcceEEEccCCcEE
Confidence            9999999999999764320           11348999999999999999999999  8899999999999999999999


Q ss_pred             EeccccceeecccCC---cceeeccceeeccCccccchhh-hhHhHhCCccccc
Q 019481          148 LSDFSTAKVSAVENA---DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHD  197 (340)
Q Consensus       148 l~DFGla~~~~~~~~---~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~  197 (340)
                      |+|||+++.......   .....++..|++|+.+.+.... ..|+|+.|...+.
T Consensus       164 l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  217 (291)
T cd05094         164 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWE  217 (291)
T ss_pred             ECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHH
Confidence            999999976543221   1223456678888644332211 2345554444443

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.97  E-value=5.1e-31  Score=236.28  Aligned_cols=238  Identities=19%  Similarity=0.148  Sum_probs=165.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc--CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI--TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      +.|+||.||+|++..+++.||+|.+...  ......+.+.+|++++++++|||++++++++.       +....++++||
T Consensus        30 g~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------~~~~~~lv~e~  102 (313)
T cd06633          30 GHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYL-------KEHTAWLVMEY  102 (313)
T ss_pred             ccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEE-------eCCEEEEEEec
Confidence            4689999999999999999999998742  22234466889999999999999999999665       33467899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +. |+|.+.+.....    .+++..+..++.||+.||.|||+  ++++||||||+||+++.++.+||+|||++.....  
T Consensus       103 ~~-~~l~~~l~~~~~----~l~~~~~~~~~~qi~~al~~LH~--~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~--  173 (313)
T cd06633         103 CL-GSASDLLEVHKK----PLQEVEIAAITHGALQGLAYLHS--HNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP--  173 (313)
T ss_pred             CC-CCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCChhhEEECCCCCEEEeecCCCcccCC--
Confidence            96 588888766443    38999999999999999999999  7899999999999999999999999999865332  


Q ss_pred             CcceeeccceeeccCcccc--ch--hhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHH
Q 019481          162 ADLTALDTSSVSAQSGKTG--ME--MKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIAT  237 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~--~~--~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (340)
                       .....|+..|++|+.+.+  .+  -...|+|+.|...+.+                     .+|..|+...........
T Consensus       174 -~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el---------------------~~g~~p~~~~~~~~~~~~  231 (313)
T cd06633         174 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL---------------------AERKPPLFNMNAMSALYH  231 (313)
T ss_pred             -CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHH---------------------HhCCCCCCCCChHHHHHH
Confidence             234567778888865421  01  1122444444444333                     222222211110000000


Q ss_pred             hhh-hccccccCcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          238 LLS-TITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       238 ~~~-~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ... .......+..+   .++-..|+++||.+||++.+++.|||+.
T Consensus       232 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~  277 (313)
T cd06633         232 IAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVR  277 (313)
T ss_pred             HHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccC
Confidence            000 00000001111   2234478999999999999999999993

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.97  E-value=9.2e-31  Score=228.68  Aligned_cols=178  Identities=12%  Similarity=0.017  Sum_probs=134.0

Q ss_pred             CCCcceEEEEEEcCC------------CCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCC
Q 019481            4 SAPSFSVLIHVPFPD------------DRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGD   71 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~------------~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~   71 (340)
                      ..|+||.||+|+...            ....||+|.++... ......+.+|+.+++.++||||+++++++..       
T Consensus         4 g~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~-------   75 (262)
T cd05077           4 GRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH-RDISLAFFETASMMRQVSHKHIVLLYGVCVR-------   75 (262)
T ss_pred             ccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh-hhHHHHHHHHHHHHHhCCCCCEeeEEEEEec-------
Confidence            478999999998532            23358899876432 2344567889999999999999999996643       


Q ss_pred             cceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCc------
Q 019481           72 RRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFK------  145 (340)
Q Consensus        72 ~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~------  145 (340)
                      ....++++||+++|+|..++.....    .+++..+..++.||++||+|||+  ++|+||||||+|||++.++.      
T Consensus        76 ~~~~~lv~e~~~~~~l~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~--~~ivH~dlkp~Nill~~~~~~~~~~~  149 (262)
T cd05077          76 DVENIMVEEFVEFGPLDLFMHRKSD----VLTTPWKFKVAKQLASALSYLED--KDLVHGNVCTKNILLAREGIDGECGP  149 (262)
T ss_pred             CCCCEEEEecccCCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHhhh--CCeECCCCCcccEEEecCCccCCCCc
Confidence            3356799999999999999876543    38999999999999999999999  88999999999999987664      


Q ss_pred             -eEEeccccceeecccCCcceeeccceeeccCccccch--hhhhHhHhCCcccccc
Q 019481          146 -CNLSDFSTAKVSAVENADLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDE  198 (340)
Q Consensus       146 -~kl~DFGla~~~~~~~~~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~  198 (340)
                       +|++|||++......   ....|+..|+||+......  -...|+|+.|...+.+
T Consensus       150 ~~~l~d~g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el  202 (262)
T cd05077         150 FIKLSDPGIPITVLSR---QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEI  202 (262)
T ss_pred             eeEeCCCCCCccccCc---ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHH
Confidence             899999998765332   2345677788886432111  1124666666555544

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.97  E-value=7.6e-31  Score=227.51  Aligned_cols=141  Identities=21%  Similarity=0.242  Sum_probs=123.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|.+.. ++.||+|.+.........+.+.+|++++++++||||+++++++.       +....++++||++
T Consensus         4 g~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-------~~~~~~~v~e~~~   75 (251)
T cd05041           4 GKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCV-------QKQPIYIVMELVP   75 (251)
T ss_pred             ccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEe-------cCCCeEEEEEcCC
Confidence            368899999999877 89999999876444445677899999999999999999999664       3346779999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      +++|.+++.....    .+++..+..++.|++.||+|||+  ++++||||||+||+++.++.+||+|||+++...
T Consensus        76 ~~~l~~~l~~~~~----~~~~~~~~~~~~~~~~~l~~lH~--~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~  144 (251)
T cd05041          76 GGSLLTFLRKKKN----RLTVKKLLQMSLDAAAGMEYLES--KNCIHRDLAARNCLVGENNVLKISDFGMSREEE  144 (251)
T ss_pred             CCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHh--CCEehhhcCcceEEEcCCCcEEEeecccccccc
Confidence            9999999976543    38899999999999999999999  889999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.97  E-value=2.8e-30  Score=227.92  Aligned_cols=145  Identities=22%  Similarity=0.246  Sum_probs=124.5

Q ss_pred             CCCcceEEEEEEcC----CCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            4 SAPSFSVLIHVPFP----DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         4 ~~G~fg~V~~~~~~----~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      ..|+||.||+|+..    .+++.+|+|+++........+.+.+|+++++.++||||+++++++..     .+..+.++++
T Consensus        13 g~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~-----~~~~~~~lv~   87 (284)
T cd05038          13 GEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEK-----PGGRSLRLIM   87 (284)
T ss_pred             ccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeec-----CCCCceEEEE
Confidence            46889999999864    34789999999764433356779999999999999999999986642     2344678999


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      ||+++++|.+++.....    .+++..+..++.|++.||+|||+  ++++||||||+||+++.++.+||+|||++.....
T Consensus        88 e~~~~~~l~~~l~~~~~----~~~~~~~~~~~~~l~~aL~~lH~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  161 (284)
T cd05038          88 EYLPSGSLRDYLQRHRD----QINLKRLLLFSSQICKGMDYLGS--QRYIHRDLAARNILVESEDLVKISDFGLAKVLPE  161 (284)
T ss_pred             ecCCCCCHHHHHHhCcc----ccCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence            99999999999987653    38999999999999999999999  8899999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.97  E-value=1.6e-30  Score=233.52  Aligned_cols=157  Identities=24%  Similarity=0.247  Sum_probs=129.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc--CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI--TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|++..+++.+|+|.+...  ......+.+.+|++++++++|||++++++++.       +....++++||
T Consensus        34 g~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-------~~~~~~lv~e~  106 (317)
T cd06635          34 GHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYL-------REHTAWLVMEY  106 (317)
T ss_pred             ccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-------eCCeEEEEEeC
Confidence            4689999999999999999999998742  22334467889999999999999999999664       33467899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      ++ |+|.+.+.....    .+++..+..++.|++.||.|||+  ++|+||||||+||+++.++.+||+|||++...... 
T Consensus       107 ~~-g~l~~~~~~~~~----~l~~~~~~~i~~~i~~~l~~lH~--~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~-  178 (317)
T cd06635         107 CL-GSASDLLEVHKK----PLQEVEIAAITHGALQGLAYLHS--HNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA-  178 (317)
T ss_pred             CC-CCHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCcccEEECCCCCEEEecCCCccccCCc-
Confidence            97 588888765443    38999999999999999999999  88999999999999999999999999998765432 


Q ss_pred             CcceeeccceeeccCc
Q 019481          162 ADLTALDTSSVSAQSG  177 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~  177 (340)
                        ....|+..|++|+.
T Consensus       179 --~~~~~~~~y~aPE~  192 (317)
T cd06635         179 --NSFVGTPYWMAPEV  192 (317)
T ss_pred             --ccccCCccccChhh
Confidence              23456777887754

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.97  E-value=1.1e-30  Score=230.34  Aligned_cols=163  Identities=16%  Similarity=0.155  Sum_probs=127.4

Q ss_pred             CCCcceEEEEEEcC-----CCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPFP-----DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      ..|+||.||++...     .++..+|+|.+... .....+.+.+|+++++.++||||+++++++..       ....+++
T Consensus        14 g~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~~lv   85 (280)
T cd05092          14 GEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTVLQHQHIVRFYGVCTE-------GRPLLMV   85 (280)
T ss_pred             CCccCCeEEEeEEecCCCCCCceEEEEEecCcC-CHHHHHHHHHHHHHHhcCCCCCCceEEEEEec-------CCceEEE
Confidence            45899999999743     35668999988743 23455679999999999999999999996653       3356799


Q ss_pred             eccccCCCHHHHhcccCCC----------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEE
Q 019481           79 KWLMQKKGLENVHIGEHPA----------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNL  148 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~----------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl  148 (340)
                      +||+++|+|.+++......          ....+++..+..++.|++.||+|||+  ++++||||||+|||+++++.+||
T Consensus        86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~--~~i~H~dlkp~nil~~~~~~~kL  163 (280)
T cd05092          86 FEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS--LHFVHRDLATRNCLVGQGLVVKI  163 (280)
T ss_pred             EecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH--CCeecccccHhhEEEcCCCCEEE
Confidence            9999999999999865321          01248899999999999999999999  77999999999999999999999


Q ss_pred             eccccceeecccCC---cceeeccceeeccC
Q 019481          149 SDFSTAKVSAVENA---DLTALDTSSVSAQS  176 (340)
Q Consensus       149 ~DFGla~~~~~~~~---~~~~~gt~~~~~p~  176 (340)
                      +|||+++.......   .....++..|++|+
T Consensus       164 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  194 (280)
T cd05092         164 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPE  194 (280)
T ss_pred             CCCCceeEcCCCceeecCCCccccccccCHH
Confidence            99999976543221   11122345566664

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.97  E-value=1.1e-30  Score=235.42  Aligned_cols=182  Identities=17%  Similarity=0.135  Sum_probs=143.1

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      +.|+||.||+|++..+++.||+|.+.+.. .....+.+.+|++++++++||||++++++|..      +...+++++||+
T Consensus        19 g~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~------~~~~~~lv~e~~   92 (328)
T cd07856          19 GMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFIS------PLEDIYFVTELL   92 (328)
T ss_pred             cccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEec------CCCcEEEEeehh
Confidence            46899999999999999999999886422 22345667899999999999999999997642      233678999998


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                       +++|.++++...      +++..+..++.|+++||+|||+  ++|+||||||+||+++.++.+||+|||+++.....  
T Consensus        93 -~~~L~~~~~~~~------~~~~~~~~~~~ql~~aL~~LH~--~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~--  161 (328)
T cd07856          93 -GTDLHRLLTSRP------LEKQFIQYFLYQILRGLKYVHS--AGVVHRDLKPSNILINENCDLKICDFGLARIQDPQ--  161 (328)
T ss_pred             -ccCHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEeECCCCCEEeCccccccccCCC--
Confidence             569998887532      7888999999999999999999  88999999999999999999999999999765332  


Q ss_pred             cceeeccceeeccCcccc--chhhhhHhHhCCcccccccccc
Q 019481          163 DLTALDTSSVSAQSGKTG--MEMKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~--~~~~~~~~~s~g~~~~~~~~~~  202 (340)
                      .....++..|++|+.+.+  ..-...|+|+.|...+.+.++.
T Consensus       162 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~  203 (328)
T cd07856         162 MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGK  203 (328)
T ss_pred             cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCC
Confidence            234456777888875433  1122457777777776665544

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.97  E-value=7.6e-31  Score=234.52  Aligned_cols=186  Identities=16%  Similarity=0.099  Sum_probs=137.7

Q ss_pred             CCCcceEEEEEEcCC-------CCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCccee
Q 019481            4 SAPSFSVLIHVPFPD-------DRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYC   75 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~-------~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~   75 (340)
                      ..|+||.||+|.+..       +...+|+|.++........+.+.+|+++++++ +||||+++++++.       +....
T Consensus        27 g~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~-------~~~~~   99 (307)
T cd05098          27 GEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-------QDGPL   99 (307)
T ss_pred             ccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe-------cCCce
Confidence            368899999998643       23569999997644445566788999999999 7999999999664       33367


Q ss_pred             eeeeccccCCCHHHHhcccCCC-----------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC
Q 019481           76 WKNKWLMQKKGLENVHIGEHPA-----------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF  144 (340)
Q Consensus        76 ~~~~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~  144 (340)
                      ++++||+++|+|.+++......           ....+++.+++.++.|++.||+|||+  ++++||||||+||+++.++
T Consensus       100 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~--~gi~H~dlkp~Nill~~~~  177 (307)
T cd05098         100 YVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDN  177 (307)
T ss_pred             EEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH--CCcccccccHHheEEcCCC
Confidence            7999999999999999865321           01248899999999999999999999  7899999999999999999


Q ss_pred             ceEEeccccceeecccCC---cceeeccceeeccCccccchh-hhhHhHhCCcccccc
Q 019481          145 KCNLSDFSTAKVSAVENA---DLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDE  198 (340)
Q Consensus       145 ~~kl~DFGla~~~~~~~~---~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~  198 (340)
                      .+||+|||+++.......   .....++..|++|+...+..+ ...|+|+.|...+.+
T Consensus       178 ~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el  235 (307)
T cd05098         178 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI  235 (307)
T ss_pred             cEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHH
Confidence            999999999976543211   111123456888864332211 123555555444443

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.97  E-value=1e-30  Score=227.37  Aligned_cols=161  Identities=18%  Similarity=0.146  Sum_probs=132.5

Q ss_pred             CCCcceEEEEEEcCCCC----ceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            4 SAPSFSVLIHVPFPDDR----DDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~----~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      ..|+||.||+|++..++    ..||+|.+.........+.+.+|++++++++|+||+++++++..       ....++++
T Consensus         8 g~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------~~~~~~i~   80 (258)
T smart00219        8 GEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTE-------EEPLMIVM   80 (258)
T ss_pred             ccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcC-------CCeeEEEE
Confidence            46899999999998766    88999999754443356788999999999999999999996653       34678999


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      ||+++++|.+++.....   ..+++..+..++.|++.||+|||+  .+++||||||+||+++.++.+||+|||+++....
T Consensus        81 e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~--~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~  155 (258)
T smart00219       81 EYMEGGDLLDYLRKNRP---KELSLSDLLSFALQIARGMEYLES--KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYD  155 (258)
T ss_pred             eccCCCCHHHHHHhhhh---ccCCHHHHHHHHHHHHHHHHHHhc--CCeeecccccceEEEccCCeEEEcccCCceeccc
Confidence            99999999999987543   228999999999999999999999  8899999999999999999999999999987655


Q ss_pred             cCCcce--eeccceeeccC
Q 019481          160 ENADLT--ALDTSSVSAQS  176 (340)
Q Consensus       160 ~~~~~~--~~gt~~~~~p~  176 (340)
                      ......  ..++..|++|+
T Consensus       156 ~~~~~~~~~~~~~~y~~Pe  174 (258)
T smart00219      156 DDYYKKKGGKLPIRWMAPE  174 (258)
T ss_pred             ccccccccCCCcccccChH
Confidence            322111  12455666664

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.97  E-value=5.6e-31  Score=231.56  Aligned_cols=177  Identities=14%  Similarity=0.037  Sum_probs=132.7

Q ss_pred             CCcceEEEEEEcCC------------------------CCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccc
Q 019481            5 APSFSVLIHVPFPD------------------------DRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSG   60 (340)
Q Consensus         5 ~G~fg~V~~~~~~~------------------------~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~   60 (340)
                      .|+||.||+|+...                        ....||+|+++... ......+.+|++++++++||||+++++
T Consensus         5 ~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~~~~   83 (274)
T cd05076           5 QGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH-RDIALAFFETASLMSQVSHIHLAFVHG   83 (274)
T ss_pred             cccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH-HHHHHHHHHHHHHHhcCCCCCeeeEEE
Confidence            68999999997532                        12458899886422 233456788999999999999999999


Q ss_pred             cccccccccCCcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEe
Q 019481           61 YWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILL  140 (340)
Q Consensus        61 ~f~~~~~~~~~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl  140 (340)
                      ++.       +....+++|||+++|+|.+++.....    .+++..+..++.||+.||+|||+  ++|+||||||+|||+
T Consensus        84 ~~~-------~~~~~~lv~ey~~~g~L~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~lH~--~~iiH~dlkp~Nill  150 (274)
T cd05076          84 VCV-------RGSENIMVEEFVEHGPLDVCLRKEKG----RVPVAWKITVAQQLASALSYLED--KNLVHGNVCAKNILL  150 (274)
T ss_pred             EEE-------eCCceEEEEecCCCCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHc--CCccCCCCCcccEEE
Confidence            664       33367799999999999999976433    38999999999999999999999  889999999999999


Q ss_pred             cCCC-------ceEEeccccceeecccCCcceeeccceeeccCccccch--hhhhHhHhCCcccccc
Q 019481          141 DETF-------KCNLSDFSTAKVSAVENADLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDE  198 (340)
Q Consensus       141 ~~~~-------~~kl~DFGla~~~~~~~~~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~  198 (340)
                      +..+       .+|++|||++.......   ...++..|++|+.+.+..  -...|+|+.|...+..
T Consensus       151 ~~~~~~~~~~~~~kl~d~g~~~~~~~~~---~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el  214 (274)
T cd05076         151 ARLGLAEGTSPFIKLSDPGVSFTALSRE---ERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEI  214 (274)
T ss_pred             eccCcccCccceeeecCCcccccccccc---ccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHH
Confidence            7644       38999999986543221   234567788886554321  1134666666555443

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.97  E-value=4.1e-31  Score=256.83  Aligned_cols=145  Identities=22%  Similarity=0.206  Sum_probs=125.3

Q ss_pred             CCCcceEEEEEEcCCCCc-----eEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPFPDDRD-----DVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~-----~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      ..|+||.||+|....-.-     .||+|.+++..+.+...+|.+|..+|++++|||||+++|       +.-+..-.+++
T Consensus       701 G~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liG-------v~l~~~~~~i~  773 (1025)
T KOG1095|consen  701 GKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIG-------VCLDSGPPLIL  773 (1025)
T ss_pred             ccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEE-------eecCCCCcEEE
Confidence            369999999998754332     499999988777888899999999999999999999999       23335566789


Q ss_pred             eccccCCCHHHHhcccCCCc--cccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481           79 KWLMQKKGLENVHIGEHPAS--VRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~~--~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      +|||+||+|..+|++.....  ...++......++.|||+|.+||++  ++.|||||...|+||+....+||+|||+||.
T Consensus       774 leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~--~~fvHRDLAaRNCLL~~~r~VKIaDFGlArD  851 (1025)
T KOG1095|consen  774 LEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES--KHFVHRDLAARNCLLDERRVVKIADFGLARD  851 (1025)
T ss_pred             ehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh--CCCcCcchhhhheeecccCcEEEcccchhHh
Confidence            99999999999999873221  1248899999999999999999999  8899999999999999999999999999994


Q ss_pred             e
Q 019481          157 S  157 (340)
Q Consensus       157 ~  157 (340)
                      +
T Consensus       852 i  852 (1025)
T KOG1095|consen  852 I  852 (1025)
T ss_pred             h
Confidence            4

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.97  E-value=2.1e-30  Score=228.55  Aligned_cols=159  Identities=20%  Similarity=0.168  Sum_probs=131.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|++..+++.+|+|.+.... .....+.+.+|++++++++||||+++++++.       +....++++||+
T Consensus         8 g~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-------~~~~~~~v~e~~   80 (282)
T cd07829           8 GEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIH-------TERKLYLVFEYC   80 (282)
T ss_pred             cccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhh-------cCCceEEEecCc
Confidence            35789999999999999999999998533 2233466788999999999999999999665       335788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-  161 (340)
                      + ++|.+++.....    .+++..+..++.|++.||+|||+  ++|+||||+|+||+++.++.+||+|||+++...... 
T Consensus        81 ~-~~l~~~i~~~~~----~~~~~~~~~~~~~i~~~l~~LH~--~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~  153 (282)
T cd07829          81 D-MDLKKYLDKRPG----PLSPNLIKSIMYQLLRGLAYCHS--HRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR  153 (282)
T ss_pred             C-cCHHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence            7 599999987632    39999999999999999999999  889999999999999999999999999998765432 


Q ss_pred             CcceeeccceeeccC
Q 019481          162 ADLTALDTSSVSAQS  176 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~  176 (340)
                      ......++..|++|+
T Consensus       154 ~~~~~~~~~~~~aPE  168 (282)
T cd07829         154 TYTHEVVTLWYRAPE  168 (282)
T ss_pred             ccCccccCcCcCChH
Confidence            222334456677775

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.97  E-value=1.3e-30  Score=227.40  Aligned_cols=157  Identities=18%  Similarity=0.213  Sum_probs=126.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .+|+||.||+|... +++.||+|.+....  ...+.+.+|++++++++||||+++++++.        ...+++++||++
T Consensus        15 g~G~~g~v~~~~~~-~~~~~a~K~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------~~~~~~v~e~~~   83 (260)
T cd05067          15 GAGQFGEVWMGYYN-GHTKVAIKSLKQGS--MSPEAFLAEANLMKQLQHPRLVRLYAVVT--------QEPIYIITEYME   83 (260)
T ss_pred             ccCccceEEeeecC-CCceEEEEEecCCC--CcHHHHHHHHHHHHhcCCcCeeeEEEEEc--------cCCcEEEEEcCC
Confidence            46899999999865 46779999987422  23457889999999999999999998543        235789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +|+|.+++.....   ..+++.++..++.|++.||+|||+  .+++||||||+||+++.++.++|+|||+++........
T Consensus        84 ~~~L~~~~~~~~~---~~~~~~~~~~i~~~i~~al~~LH~--~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~  158 (260)
T cd05067          84 NGSLVDFLKTPEG---IKLTINKLIDMAAQIAEGMAFIER--KNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT  158 (260)
T ss_pred             CCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHhc--CCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcc
Confidence            9999999876543   358999999999999999999999  77999999999999999999999999999876532211


Q ss_pred             --ceeeccceeeccC
Q 019481          164 --LTALDTSSVSAQS  176 (340)
Q Consensus       164 --~~~~gt~~~~~p~  176 (340)
                        ....++..|++|+
T Consensus       159 ~~~~~~~~~~y~~pe  173 (260)
T cd05067         159 AREGAKFPIKWTAPE  173 (260)
T ss_pred             cccCCcccccccCHH
Confidence              1122344566664

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.97  E-value=1.4e-30  Score=233.64  Aligned_cols=147  Identities=18%  Similarity=0.188  Sum_probs=121.7

Q ss_pred             CCCcceEEEEEEcC-------CCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCccee
Q 019481            4 SAPSFSVLIHVPFP-------DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYC   75 (340)
Q Consensus         4 ~~G~fg~V~~~~~~-------~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~   75 (340)
                      ..|+||.||+|++.       .....+|+|+++..........+.+|+++++++ +||||+++++++.       +....
T Consensus        21 g~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-------~~~~~   93 (314)
T cd05099          21 GEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCT-------QEGPL   93 (314)
T ss_pred             cCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc-------cCCce
Confidence            46889999999753       234579999987544445566788999999999 5999999999664       33467


Q ss_pred             eeeeccccCCCHHHHhcccCCC-----------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC
Q 019481           76 WKNKWLMQKKGLENVHIGEHPA-----------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF  144 (340)
Q Consensus        76 ~~~~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~  144 (340)
                      ++++||+++|+|.+++......           ....+++..+..++.||+.||+|||+  ++|+||||||+|||++.++
T Consensus        94 ~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~--~gi~H~dlkp~Nill~~~~  171 (314)
T cd05099          94 YVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES--RRCIHRDLAARNVLVTEDN  171 (314)
T ss_pred             EEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH--CCeeeccccceeEEEcCCC
Confidence            8999999999999999764320           11348899999999999999999999  8899999999999999999


Q ss_pred             ceEEeccccceeecc
Q 019481          145 KCNLSDFSTAKVSAV  159 (340)
Q Consensus       145 ~~kl~DFGla~~~~~  159 (340)
                      .+||+|||+++....
T Consensus       172 ~~kL~Dfg~~~~~~~  186 (314)
T cd05099         172 VMKIADFGLARGVHD  186 (314)
T ss_pred             cEEEccccccccccc
Confidence            999999999986643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.97  E-value=5.2e-30  Score=229.21  Aligned_cols=240  Identities=20%  Similarity=0.182  Sum_probs=165.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc--CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI--TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|++..+++.+|+|.+...  ......+++.+|++++++++|+|++++++++.       +....++++||
T Consensus        24 g~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~   96 (308)
T cd06634          24 GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL-------REHTAWLVMEY   96 (308)
T ss_pred             eeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEE-------cCCeeEEEEEc
Confidence            4689999999999999999999998642  23344566889999999999999999999665       33467899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +. |+|.+.+.....    .+++..+..++.|++.||.|||+  .+++||||||+||+++.++.+||+|||++...... 
T Consensus        97 ~~-~~l~~~~~~~~~----~l~~~~~~~~~~~l~~~l~~LH~--~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~-  168 (308)
T cd06634          97 CL-GSASDLLEVHKK----PLQEVEIAAVTHGALQGLAYLHS--HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-  168 (308)
T ss_pred             cC-CCHHHHHHHcCC----CCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHhEEECCCCcEEECCcccceeecCc-
Confidence            96 688888765443    38999999999999999999999  78999999999999999999999999999766442 


Q ss_pred             CcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                        ....|+..|++|+...+..          .....  ...+.|+     .|++..++.+|..|+.......... .   
T Consensus       169 --~~~~~~~~y~aPE~~~~~~----------~~~~~--~~~Di~s-----lG~il~el~~g~~p~~~~~~~~~~~-~---  225 (308)
T cd06634         169 --NXFVGTPYWMAPEVILAMD----------EGQYD--GKVDVWS-----LGITCIELAERKPPLFNMNAMSALY-H---  225 (308)
T ss_pred             --ccccCCccccCHHHHhhcc----------cCCCC--cccchHH-----HHHHHHHHHcCCCCCccccHHHHHH-H---
Confidence              2345666677774322100          00000  1122244     4444444444444332211110000 0   


Q ss_pred             ccccccCc-----CC---ccccccccccCCCCchHHHHhhcCcceeee
Q 019481          242 ITFLSALK-----IT---GCKSEEGYKNNSSLNPICQIVNQHPFYIRL  281 (340)
Q Consensus       242 ~~~~~~~~-----~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~~~  281 (340)
                      +.....+.     .+   ..+...||+.+|.+||+++++++|||+...
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~  273 (308)
T cd06634         226 IAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE  273 (308)
T ss_pred             HhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence            00011111     11   123447899999999999999999999543

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.97  E-value=6.1e-31  Score=238.71  Aligned_cols=187  Identities=17%  Similarity=0.124  Sum_probs=142.1

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|++..+++.||+|.+.... .....+.+.+|+.++++++||||++++++|...... ......++++||+
T Consensus        24 g~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-~~~~~~~lv~e~~  102 (343)
T cd07851          24 GSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSL-EDFQDVYLVTHLM  102 (343)
T ss_pred             ccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccc-cccccEEEEEecC
Confidence            35889999999999999999999986422 223345678899999999999999999977543221 2223578999998


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                       +++|.+++... .     +++..+..++.|+++||+|||+  .+|+||||||+||+++.++.+||+|||++......  
T Consensus       103 -~~~L~~~~~~~-~-----l~~~~~~~~~~ql~~aL~~LH~--~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~--  171 (343)
T cd07851         103 -GADLNNIVKCQ-K-----LSDDHIQFLVYQILRGLKYIHS--AGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE--  171 (343)
T ss_pred             -CCCHHHHHhcC-C-----CCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHeEECCCCCEEEcccccccccccc--
Confidence             67999998763 2     8999999999999999999999  77999999999999999999999999999876443  


Q ss_pred             cceeeccceeeccCcccc--chhhhhHhHhCCcccccccccc
Q 019481          163 DLTALDTSSVSAQSGKTG--MEMKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~--~~~~~~~~~s~g~~~~~~~~~~  202 (340)
                      .....++..|++|+...+  ..-...|+|+.|...+...++.
T Consensus       172 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~  213 (343)
T cd07851         172 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGK  213 (343)
T ss_pred             ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCC
Confidence            234456777777753321  1112346666665555554443

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.97  E-value=8.6e-31  Score=250.14  Aligned_cols=166  Identities=13%  Similarity=0.056  Sum_probs=116.0

Q ss_pred             CCcceEEEEEEcCCC----CceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVPFPDD----RDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~----~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|+||.||+|++..+    +..||+|.+.....   .+....|  .++...+.++..+...|..... ..+....++++|
T Consensus       142 ~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~---~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~LV~e  215 (566)
T PLN03225        142 EGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA---VEIWMNE--RVRRACPNSCADFVYGFLEPVS-SKKEDEYWLVWR  215 (566)
T ss_pred             eCCCeEEEEEEEcCCccccCcEEEEEEecccch---hHHHHHH--HHHhhchhhHHHHHHhhhcccc-cccCCceEEEEE
Confidence            589999999999988    89999998853221   1111111  2233334444444443332221 234556789999


Q ss_pred             cccCCCHHHHhcccCCC---------------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC-CC
Q 019481           81 LMQKKGLENVHIGEHPA---------------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE-TF  144 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~---------------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~-~~  144 (340)
                      |+.+++|.+++......               ......+..+..++.||+.||+|||+  ++|+||||||+|||++. ++
T Consensus       216 y~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~--~gIiHRDLKP~NILl~~~~~  293 (566)
T PLN03225        216 YEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS--TGIVHRDVKPQNIIFSEGSG  293 (566)
T ss_pred             ecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH--CCEEeCcCCHHHEEEeCCCC
Confidence            99999999999764320               00012234567899999999999999  88999999999999986 68


Q ss_pred             ceEEeccccceeeccc--CCcceeeccceeeccCcc
Q 019481          145 KCNLSDFSTAKVSAVE--NADLTALDTSSVSAQSGK  178 (340)
Q Consensus       145 ~~kl~DFGla~~~~~~--~~~~~~~gt~~~~~p~~~  178 (340)
                      .+||+|||+|+.+...  ....+++||+.|+||+.+
T Consensus       294 ~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~  329 (566)
T PLN03225        294 SFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQY  329 (566)
T ss_pred             cEEEEeCCCccccccccccCCcccccCCCccChHHh
Confidence            9999999999866432  223456789999999743

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.97  E-value=1.3e-30  Score=227.27  Aligned_cols=157  Identities=16%  Similarity=0.178  Sum_probs=125.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      +.|+||.||+|.+. ++..+|+|.+....  ...+.+.+|++++++++||||+++++++.        ....++++||++
T Consensus        15 g~g~~~~v~~~~~~-~~~~~~~k~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~--------~~~~~lv~e~~~   83 (260)
T cd05070          15 GNGQFGEVWMGTWN-GNTKVAVKTLKPGT--MSPESFLEEAQIMKKLRHDKLVQLYAVVS--------EEPIYIVTEYMS   83 (260)
T ss_pred             ccccCceEEEEEec-CCceeEEEEecCCC--CCHHHHHHHHHHHHhcCCCceEEEEeEEC--------CCCcEEEEEecC
Confidence            46999999999876 45569999986432  23456889999999999999999998543        124579999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +++|.+++.....   ..+++..+..++.|++.||+|||+  ++|+||||||+||+++.++.+||+|||++.........
T Consensus        84 ~~~L~~~~~~~~~---~~~~~~~~~~~~~~l~~al~~lH~--~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~  158 (260)
T cd05070          84 KGSLLDFLKDGEG---RALKLPNLVDMAAQVAAGMAYIER--MNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT  158 (260)
T ss_pred             CCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCccceEEEeCCceEEeCCceeeeeccCcccc
Confidence            9999999986543   348999999999999999999999  88999999999999999999999999999876543211


Q ss_pred             c--eeeccceeeccC
Q 019481          164 L--TALDTSSVSAQS  176 (340)
Q Consensus       164 ~--~~~gt~~~~~p~  176 (340)
                      .  ...++..|++|+
T Consensus       159 ~~~~~~~~~~y~aPE  173 (260)
T cd05070         159 ARQGAKFPIKWTAPE  173 (260)
T ss_pred             cccCCCCCccccChH
Confidence            1  112334567665

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.97  E-value=1e-30  Score=231.33  Aligned_cols=158  Identities=20%  Similarity=0.199  Sum_probs=132.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|.+..+++.+|+|+++....  ..+.+.+|++++++++|+||+++++.|..       ....++++||++
T Consensus        28 ~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------~~~~~lv~e~~~   98 (286)
T cd06614          28 GEGASGEVYKATDRATGKEVAIKKMRLRKQ--NKELIINEILIMKDCKHPNIVDYYDSYLV-------GDELWVVMEYMD   98 (286)
T ss_pred             cCCCCeEEEEEEEccCCcEEEEEEEecCch--hHHHHHHHHHHHHHCCCCCeeEEEEEEEE-------CCEEEEEEeccC
Confidence            468899999999998899999999975332  45678899999999999999999997653       347889999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-C
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-A  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~  162 (340)
                      +++|.+++.....    .+++..+..++.|++.||.|||+  ++++|+||||+||+++.++.+||+|||++....... .
T Consensus        99 ~~~L~~~l~~~~~----~l~~~~~~~i~~~i~~~L~~lH~--~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  172 (286)
T cd06614          99 GGSLTDIITQNFV----RMNEPQIAYVCREVLQGLEYLHS--QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSK  172 (286)
T ss_pred             CCcHHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHh--CCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhh
Confidence            9999999998752    39999999999999999999999  889999999999999999999999999987554322 1


Q ss_pred             cceeeccceeeccC
Q 019481          163 DLTALDTSSVSAQS  176 (340)
Q Consensus       163 ~~~~~gt~~~~~p~  176 (340)
                      .....++..|++|+
T Consensus       173 ~~~~~~~~~y~~PE  186 (286)
T cd06614         173 RNSVVGTPYWMAPE  186 (286)
T ss_pred             hccccCCcccCCHh
Confidence            22334566677774

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.7e-32  Score=236.74  Aligned_cols=159  Identities=17%  Similarity=0.074  Sum_probs=137.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc--hhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP--LQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.|-+|..+.+.+.+|+|++++..-  ..+.+--..|-++|.-- +-|.+++++..|++..       .+|.|||
T Consensus       358 GKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmD-------RLyFVME  430 (683)
T KOG0696|consen  358 GKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD-------RLYFVME  430 (683)
T ss_pred             ccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhh-------heeeEEE
Confidence            479999999999999999999999986322  22334456788888776 4679999999887543       5679999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceee-cc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVS-AV  159 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~-~~  159 (340)
                      |+.||+|.-+|++.++     +.|..+..|+.+|+-||=+||+  ++||+||||.+||++|.+|++||+|||+++.- -+
T Consensus       431 yvnGGDLMyhiQQ~Gk-----FKEp~AvFYAaEiaigLFFLh~--kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~  503 (683)
T KOG0696|consen  431 YVNGGDLMYHIQQVGK-----FKEPVAVFYAAEIAIGLFFLHS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD  503 (683)
T ss_pred             EecCchhhhHHHHhcc-----cCCchhhhhhHHHHHHhhhhhc--CCeeeeeccccceEeccCCceEeeecccccccccC
Confidence            9999999999999988     9999999999999999999999  88999999999999999999999999999853 34


Q ss_pred             cCCcceeeccceeeccC
Q 019481          160 ENADLTALDTSSVSAQS  176 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~  176 (340)
                      +....++||||.|+||+
T Consensus       504 ~~TTkTFCGTPdYiAPE  520 (683)
T KOG0696|consen  504 GVTTKTFCGTPDYIAPE  520 (683)
T ss_pred             CcceeeecCCCcccccc
Confidence            56678999999999994

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.97  E-value=5.5e-31  Score=209.14  Aligned_cols=199  Identities=18%  Similarity=0.121  Sum_probs=154.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.|-+-++..+|...|+|.+......+..+++++|+++..+. .+|.+|++||.+.       ++...|+.||.|
T Consensus        55 GrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~-------regdvwIcME~M  127 (282)
T KOG0984|consen   55 GRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALF-------REGDVWICMELM  127 (282)
T ss_pred             cCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhh-------ccccEEEeHHHh
Confidence            36889999999999999999999999877778888899999997776 6999999999654       445778999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      .. ||..+-++--.. +..++|...-+++..+..||.|||+. ..+||||+||+|||+|.+|++||||||++..+.++-.
T Consensus       128 ~t-Sldkfy~~v~~~-g~~ipE~vlGkIa~Svv~al~~L~~k-L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiA  204 (282)
T KOG0984|consen  128 DT-SLDKFYRKVLKK-GGTIPEDVLGKIAVSVVHALEFLHSK-LSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIA  204 (282)
T ss_pred             hh-hHHHHHHHHHhc-CCcCchHHhhHhHHHHHHHHHHHHHH-hhhhhccCCcceEEEccCCcEEEcccccceeehhhhH
Confidence            64 877664432110 13499999999999999999999982 3499999999999999999999999999998877655


Q ss_pred             cceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHH
Q 019481          163 DLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNN  228 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (340)
                      .+-..|...||||+      .+..++-.     ..+....+.|+     +|++..|+.....||+.
T Consensus       205 kt~daGCkpYmaPE------ri~~e~n~-----~gY~vksDvWS-----LGItmiElA~lr~PY~~  254 (282)
T KOG0984|consen  205 KTMDAGCKPYMAPE------RINPELNQ-----KGYSVKSDVWS-----LGITMIEMAILRFPYES  254 (282)
T ss_pred             HHHhcCCCccCChh------hcCcccCc-----ccceeehhhhh-----hhhhhhhhhhccccccc
Confidence            44467888899994      33222111     12333445577     77777777777766665

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.97  E-value=1.8e-30  Score=228.92  Aligned_cols=165  Identities=13%  Similarity=0.045  Sum_probs=130.9

Q ss_pred             CCCcceEEEEEEcCC----CCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            4 SAPSFSVLIHVPFPD----DRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~----~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      ..|+||.||+|.+..    +++.||+|.+.........+.+.+|++++++++||||+++++++..      +....++++
T Consensus        15 ~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~------~~~~~~~~~   88 (280)
T cd05043          15 QEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIE------DGEPPFVLY   88 (280)
T ss_pred             cccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec------CCCCCEEEE
Confidence            378999999999876    3678999998765555566778999999999999999999995432      234677899


Q ss_pred             ccccCCCHHHHhcccCCC---ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481           80 WLMQKKGLENVHIGEHPA---SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~---~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      ||+++|+|.+++......   ....+++..+..++.|++.||+|||+  ++++||||||+||+++.++.+||+|||+++.
T Consensus        89 ~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~--~~i~H~di~p~nil~~~~~~~kl~d~g~~~~  166 (280)
T cd05043          89 PYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK--RGVIHKDIAARNCVIDEELQVKITDNALSRD  166 (280)
T ss_pred             EcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH--CCEeecccCHhhEEEcCCCcEEECCCCCccc
Confidence            999999999998764321   11348999999999999999999999  8899999999999999999999999999987


Q ss_pred             ecccCCc---ceeeccceeeccC
Q 019481          157 SAVENAD---LTALDTSSVSAQS  176 (340)
Q Consensus       157 ~~~~~~~---~~~~gt~~~~~p~  176 (340)
                      +......   ....++..|++|+
T Consensus       167 ~~~~~~~~~~~~~~~~~~y~apE  189 (280)
T cd05043         167 LFPMDYHCLGDNENRPVKWMALE  189 (280)
T ss_pred             ccCCceEEeCCCCCcchhccCHH
Confidence            6443211   1122344566664

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.97  E-value=1.2e-31  Score=244.81  Aligned_cols=245  Identities=19%  Similarity=0.184  Sum_probs=185.4

Q ss_pred             CCCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            3 GSAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         3 ~~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..+|+||.||+|+++.+++..|+|+++... ..+.+.+.+|+-+++.++|||||-+++.|-       .+...|+.||||
T Consensus        23 vgsgTygdvyKaRd~~s~elaavkvVkLep-~dd~~~iqqei~~~~dc~h~nivay~gsyl-------r~dklwicMEyc   94 (829)
T KOG0576|consen   23 VGSGTYGDVYKARDKRSGELAAVKVVKLEP-GDDFSGIQQEIGMLRDCRHPNIVAYFGSYL-------RRDKLWICMEYC   94 (829)
T ss_pred             ecCCcccchhhhcccccCchhhheeeeccC-CccccccccceeeeecCCCcChHHHHhhhh-------hhcCcEEEEEec
Confidence            458999999999999999999999998643 234566788999999999999999999653       334677999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-C
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-N  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~  161 (340)
                      -||+|.+.-+-.+.     ++|.++...+++.++||+|||+  ++-+|||||-.|||++..|.+|++|||.+..+.-. .
T Consensus        95 gggslQdiy~~Tgp-----lselqiayvcRetl~gl~ylhs--~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~  167 (829)
T KOG0576|consen   95 GGGSLQDIYHVTGP-----LSELQIAYVCRETLQGLKYLHS--QGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIA  167 (829)
T ss_pred             CCCcccceeeeccc-----chhHHHHHHHhhhhccchhhhc--CCcccccccccceeecccCceeecccCchhhhhhhhh
Confidence            99999999988776     9999999999999999999999  88999999999999999999999999998776542 3


Q ss_pred             CcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      +..++.||+.+|||      |+...+    ....|.  ...+.|.     .+++..++..-.+|.-+..+.-... +-.+
T Consensus       168 KrksfiGtpywmap------Evaave----rkggyn--qlcdiwa-----~gitAiel~eLqpplfdlhpmr~l~-LmTk  229 (829)
T KOG0576|consen  168 KRKSFIGTPYWMAP------EVAAVE----RKGGYN--QLCDIWA-----LGITAIELGELQPPLFDLHPMRALF-LMTK  229 (829)
T ss_pred             hhhcccCCccccch------hHHHHH----hccccc--ccccccc-----cccchhhhhhcCCcccccchHHHHH-Hhhc
Confidence            45678999999999      555333    112222  2344477     7777777776555433333332211 1222


Q ss_pred             cccccc-CcCCc-------cccccccccCCCCchHHHHhhcCcceee
Q 019481          242 ITFLSA-LKITG-------CKSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       242 ~~~~~~-~~~p~-------~~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                      ..++.+ .+=+.       .|.+.+|.++|.+|||++-++.|||+..
T Consensus       230 S~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~  276 (829)
T KOG0576|consen  230 SGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ  276 (829)
T ss_pred             cCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence            333322 11111       2244679999999999999999999943

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.3e-31  Score=242.94  Aligned_cols=231  Identities=17%  Similarity=0.120  Sum_probs=162.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.|..+.+..+++..++|++.+.     ..+..+|+.++... +||||+++++.       +.+....|++||.+.
T Consensus       332 ~gs~s~~~~~~~~~t~~~~~vkii~~~-----~~~~~~e~~~~~~~~~h~niv~~~~v-------~~~~~~~~~v~e~l~  399 (612)
T KOG0603|consen  332 EGSFSAVKYCESSPTDQEPAVKIISKR-----ADDNQDEIPISLLVRDHPNIVKSHDV-------YEDGKEIYLVMELLD  399 (612)
T ss_pred             CCCccceeeeeccccccchhheecccc-----ccccccccchhhhhcCCCcceeecce-------ecCCceeeeeehhcc
Confidence            689999999999999999999999753     22345678776665 69999999994       456678999999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEe-cCCCceEEeccccceeecccCC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILL-DETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl-~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      ||-|.+.+.....     +. ..+..|++||+.|+.|||+  +||+||||||+|||+ ++.++++|+|||.++.....  
T Consensus       400 g~ell~ri~~~~~-----~~-~e~~~w~~~lv~Av~~LH~--~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~--  469 (612)
T KOG0603|consen  400 GGELLRRIRSKPE-----FC-SEASQWAAELVSAVDYLHE--QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS--  469 (612)
T ss_pred             ccHHHHHHHhcch-----hH-HHHHHHHHHHHHHHHHHHh--cCeeecCCChhheeecCCCCcEEEEEechhhhCchh--
Confidence            9999888887664     33 7888999999999999999  889999999999999 58999999999999887665  


Q ss_pred             cceeeccceeeccCccccchhhhh-HhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMKMA-QLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~~~-~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      ..+-|=|..|.||+.....|+... |+                |+     +|.+..+|.+|..++........+...+..
T Consensus       470 ~~tp~~t~~y~APEvl~~~~yt~acD~----------------WS-----LGvlLy~ML~G~tp~~~~P~~~ei~~~i~~  528 (612)
T KOG0603|consen  470 CDTPALTLQYVAPEVLAIQEYTEACDW----------------WS-----LGVLLYEMLTGRTLFAAHPAGIEIHTRIQM  528 (612)
T ss_pred             hcccchhhcccChhhhccCCCCcchhh----------------HH-----HHHHHHHHHhCCCccccCCchHHHHHhhcC
Confidence            223345677788853322222211 23                33     333333333333333322211111111111


Q ss_pred             cccccc-CcCCccccccccccCCCCchHHHHhhcCcce
Q 019481          242 ITFLSA-LKITGCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       242 ~~~~~~-~~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ..+..- -...+++...+|+.||.+|+++++++.|||+
T Consensus       529 ~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  529 PKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             CccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence            111100 1111344457799999999999999999999

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.97  E-value=4e-30  Score=227.72  Aligned_cols=243  Identities=16%  Similarity=0.091  Sum_probs=166.1

Q ss_pred             CCCcceEEEEEEcC---CCCceEEEEEeeccC---chhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceee
Q 019481            4 SAPSFSVLIHVPFP---DDRDDVMLKLHELIT---PLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCW   76 (340)
Q Consensus         4 ~~G~fg~V~~~~~~---~~~~~vAiK~~~~~~---~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~   76 (340)
                      ..|+||.||++++.   .+++.||+|++++..   .....+.+.+|+++++++ +||||+++++.|.       +....+
T Consensus         9 g~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~-------~~~~~~   81 (288)
T cd05583           9 GTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQ-------TDTKLH   81 (288)
T ss_pred             ccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeee-------cCCEEE
Confidence            46899999999863   467889999987422   123346678999999999 5999999999664       334677


Q ss_pred             eeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481           77 KNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus        77 ~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      +++||+++|+|.+.+.....     +++..++.++.|+++||.|||+  .+++||||||+||+++.++.++|+|||+++.
T Consensus        82 lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~ql~~~l~~lH~--~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~  154 (288)
T cd05583          82 LILDYVNGGELFTHLYQREH-----FTESEVRVYIAEIVLALDHLHQ--LGIIYRDIKLENILLDSEGHVVLTDFGLSKE  154 (288)
T ss_pred             EEEecCCCCcHHHHHhhcCC-----cCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHeEECCCCCEEEEECccccc
Confidence            99999999999999987654     8999999999999999999999  8899999999999999999999999999986


Q ss_pred             ecccCC--cceeeccceeeccCccccch---hhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHH
Q 019481          157 SAVENA--DLTALDTSSVSAQSGKTGME---MKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLY  231 (340)
Q Consensus       157 ~~~~~~--~~~~~gt~~~~~p~~~~~~~---~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (340)
                      ......  .....|+..|++|+...+..   -...|+|+.|...+.+.++.  +|+.....          .........
T Consensus       155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~--~p~~~~~~----------~~~~~~~~~  222 (288)
T cd05583         155 FLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGA--SPFTVDGE----------QNSQSEISR  222 (288)
T ss_pred             cccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCC--CCcccCcc----------cchHHHHHH
Confidence            544322  22345677777776443211   11235666555555544433  22211000          000001100


Q ss_pred             HHHHHHhhhhccccccCcCC---ccccccccccCCCCchH---HHHhhcCcce
Q 019481          232 LLLIATLLSTITFLSALKIT---GCKSEEGYKNNSSLNPI---CQIVNQHPFY  278 (340)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~p---~~~~~~~l~~dP~~R~t---~~~ll~hp~~  278 (340)
                      .     . .......+...+   ..+...|++.||++|||   ++++++|||+
T Consensus       223 ~-----~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~  269 (288)
T cd05583         223 R-----I-LKSKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFF  269 (288)
T ss_pred             H-----H-HccCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCccc
Confidence            0     0 000000111111   12234689999999998   5688999999

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.97  E-value=2.3e-30  Score=229.24  Aligned_cols=146  Identities=19%  Similarity=0.230  Sum_probs=122.3

Q ss_pred             CCCcceEEEEEEcC-----CCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPFP-----DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      ..|+||.||+|.+.     .++..||+|++.........+.+.+|++++++++||||+++++++.       +....+++
T Consensus        14 g~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~-------~~~~~~lv   86 (288)
T cd05050          14 GQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCA-------VGKPMCLL   86 (288)
T ss_pred             cccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEc-------CCCccEEE
Confidence            35889999999874     3678899999976555555677899999999999999999999654       33356799


Q ss_pred             eccccCCCHHHHhcccCCC-----------------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEec
Q 019481           79 KWLMQKKGLENVHIGEHPA-----------------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLD  141 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~-----------------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~  141 (340)
                      +||+++|+|.+++......                 +...+++..+..++.|++.||.|||+  ++++||||||+||+++
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~--~~i~H~dl~p~nil~~  164 (288)
T cd05050          87 FEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE--RKFVHRDLATRNCLVG  164 (288)
T ss_pred             EecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh--CCeecccccHhheEec
Confidence            9999999999999753210                 11247889999999999999999999  8899999999999999


Q ss_pred             CCCceEEeccccceeec
Q 019481          142 ETFKCNLSDFSTAKVSA  158 (340)
Q Consensus       142 ~~~~~kl~DFGla~~~~  158 (340)
                      .++.+||+|||+++...
T Consensus       165 ~~~~~~l~dfg~~~~~~  181 (288)
T cd05050         165 ENMVVKIADFGLSRNIY  181 (288)
T ss_pred             CCCceEECccccceecc
Confidence            99999999999997654

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.97  E-value=1.5e-30  Score=227.95  Aligned_cols=164  Identities=19%  Similarity=0.098  Sum_probs=128.3

Q ss_pred             CCCcceEEEEEEcCCCC------ceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeee
Q 019481            4 SAPSFSVLIHVPFPDDR------DDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWK   77 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~------~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~   77 (340)
                      ..|+||.||+|++....      +.+|+|.+...........+.+|+++++.++||||+++++++.       +....++
T Consensus         4 g~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~~   76 (269)
T cd05044           4 GSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCL-------LNEPQYI   76 (269)
T ss_pred             ccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeec-------CCCCeEE
Confidence            46899999999976543      6899999875443345667889999999999999999999664       3336789


Q ss_pred             eeccccCCCHHHHhcccCCC--ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC-----ceEEec
Q 019481           78 NKWLMQKKGLENVHIGEHPA--SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF-----KCNLSD  150 (340)
Q Consensus        78 ~~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~-----~~kl~D  150 (340)
                      ++||+++|+|.+++......  ....+++..+..++.|++.||+|||+  .+++|+||||+||+++.++     .+||+|
T Consensus        77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~--~~i~H~dl~p~nil~~~~~~~~~~~~~l~d  154 (269)
T cd05044          77 IMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ--MHFIHRDLAARNCLVSEKGYDADRVVKIGD  154 (269)
T ss_pred             EEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh--CCcccCCCChheEEEecCCCCCCcceEECC
Confidence            99999999999999754221  01237899999999999999999999  7799999999999999877     899999


Q ss_pred             cccceeecccCC---cceeeccceeeccC
Q 019481          151 FSTAKVSAVENA---DLTALDTSSVSAQS  176 (340)
Q Consensus       151 FGla~~~~~~~~---~~~~~gt~~~~~p~  176 (340)
                      ||+++.......   .....++..|++|+
T Consensus       155 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE  183 (269)
T cd05044         155 FGLARDIYKSDYYRKEGEGLLPVRWMAPE  183 (269)
T ss_pred             cccccccccccccccCcccCCCccccCHH
Confidence            999976543221   11123345566664

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=3.2e-30  Score=224.88  Aligned_cols=179  Identities=18%  Similarity=0.180  Sum_probs=135.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|.+. +++.+|+|.+....  ...+.+.+|++++++++||||+++++++.       +....++++||++
T Consensus        15 g~g~~~~v~~~~~~-~~~~~~vK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~~v~e~~~   84 (261)
T cd05034          15 GAGQFGEVWMGTWN-GTTKVAVKTLKPGT--MSPEAFLQEAQIMKKLRHDKLVQLYAVCS-------EEEPIYIVTEYMS   84 (261)
T ss_pred             ccCcceEEEEEEEc-CCceEEEEEecCCc--cCHHHHHHHHHHHhhCCCCCEeeeeeeee-------cCCceEEEEeccC
Confidence            46889999999975 45779999987422  23466889999999999999999999654       3346789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +++|.+++.....   ..+++..+..++.|++.||+|||+  ++++|+||||+||+++.++.+||+|||+++........
T Consensus        85 ~~~L~~~i~~~~~---~~~~~~~~~~~~~~i~~al~~lh~--~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~  159 (261)
T cd05034          85 KGSLLDFLKSGEG---KKLRLPQLVDMAAQIAEGMAYLES--RNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT  159 (261)
T ss_pred             CCCHHHHHhcccc---CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCcchheEEEcCCCCEEECccccceeccchhhh
Confidence            9999999987553   348999999999999999999999  88999999999999999999999999999876532111


Q ss_pred             --ceeeccceeeccCccccchhh-hhHhHhCCccccc
Q 019481          164 --LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHD  197 (340)
Q Consensus       164 --~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~  197 (340)
                        ....++..|++|+...+.... ..|+|+.|...+.
T Consensus       160 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~  196 (261)
T cd05034         160 AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTE  196 (261)
T ss_pred             hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHH
Confidence              111223456666533322111 2355554444443

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=4.8e-30  Score=226.22  Aligned_cols=158  Identities=19%  Similarity=0.216  Sum_probs=133.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhh--cCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEE--IFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~--l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ++|.||.||+|+..  ++.||||++.    .+..+.+.+|-+|.+.  ++|+||++++++-...   ..++...++|++|
T Consensus       219 ~~Grfg~V~KaqL~--~~~VAVKifp----~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~---t~~~~eywLVt~f  289 (534)
T KOG3653|consen  219 GRGRFGCVWKAQLD--NRLVAVKIFP----EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRG---TADRMEYWLVTEF  289 (534)
T ss_pred             hcCccceeehhhcc--CceeEEEecC----HHHHHHHHhHHHHHhccCccchhHHHhhchhccC---CccccceeEEeee
Confidence            47999999999975  4889999995    5667778888888665  5799999999854432   2234467899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhc-C------CCceecCCCCCCcEEecCCCceEEeccccc
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHS-S------EKQVIYRDFKAPNILLDETFKCNLSDFSTA  154 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~------~~~iiHrDlKp~NILl~~~~~~kl~DFGla  154 (340)
                      .+.|||.++|+.+.      ++|....+++..+++||+|||+ .      +.+|+|||||..|||+.++++..|+|||+|
T Consensus       290 h~kGsL~dyL~~nt------isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA  363 (534)
T KOG3653|consen  290 HPKGSLCDYLKANT------ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA  363 (534)
T ss_pred             ccCCcHHHHHHhcc------ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence            99999999999865      8999999999999999999997 2      358999999999999999999999999999


Q ss_pred             eeecccCC---cceeeccceeeccC
Q 019481          155 KVSAVENA---DLTALDTSSVSAQS  176 (340)
Q Consensus       155 ~~~~~~~~---~~~~~gt~~~~~p~  176 (340)
                      ..+..+..   ....+||..||||+
T Consensus       364 l~~~p~~~~~d~~~qVGT~RYMAPE  388 (534)
T KOG3653|consen  364 LRLEPGKPQGDTHGQVGTRRYMAPE  388 (534)
T ss_pred             EEecCCCCCcchhhhhhhhhhcCHH
Confidence            98876433   23468999999995

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.96  E-value=5e-30  Score=222.90  Aligned_cols=153  Identities=20%  Similarity=0.172  Sum_probs=123.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||++.  .+++.||+|.++...   ..+.+.+|+.++++++||||+++++++..+        ..++++||++
T Consensus        15 g~g~~g~v~~~~--~~~~~~~iK~~~~~~---~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--------~~~~v~e~~~   81 (254)
T cd05083          15 GEGEFGAVLQGE--YTGQKVAVKNIKCDV---TAQAFLEETAVMTKLHHKNLVRLLGVILHN--------GLYIVMELMS   81 (254)
T ss_pred             ccCCCCceEecc--cCCCceEEEeecCcc---hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC--------CcEEEEECCC
Confidence            368999999987  467789999986422   235688999999999999999999966422        3578999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +|+|.+++.....   ..+++..+..++.|++.||.|||+  .+++||||||+||+++.++.+||+|||+++......  
T Consensus        82 ~~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~al~~lH~--~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~--  154 (254)
T cd05083          82 KGNLVNFLRTRGR---ALVSVIQLLQFSLDVAEGMEYLES--KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV--  154 (254)
T ss_pred             CCCHHHHHHhcCc---CCCCHHHHHHHHHHHHHHHHHHHh--CCeeccccCcceEEEcCCCcEEECCCccceeccccC--
Confidence            9999999986543   348999999999999999999999  779999999999999999999999999997653321  


Q ss_pred             ceeeccceeeccC
Q 019481          164 LTALDTSSVSAQS  176 (340)
Q Consensus       164 ~~~~gt~~~~~p~  176 (340)
                      .....+..|++|+
T Consensus       155 ~~~~~~~~y~~pe  167 (254)
T cd05083         155 DNSKLPVKWTAPE  167 (254)
T ss_pred             CCCCCCceecCHH
Confidence            1112234466664

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=2.3e-30  Score=226.65  Aligned_cols=247  Identities=15%  Similarity=0.129  Sum_probs=176.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCch------hhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPL------QLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~------~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      .|||+.||+|.+...++.||+|+....++-      ...+...+|.+|-+.|+||.||++|++|.-+     .+.+| .|
T Consensus       473 rGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD-----tdsFC-TV  546 (775)
T KOG1151|consen  473 RGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD-----TDSFC-TV  546 (775)
T ss_pred             cccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec-----cccce-ee
Confidence            589999999999999999999998753322      1234467899999999999999999998632     33344 78


Q ss_pred             eccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEec---CCCceEEeccccce
Q 019481           79 KWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLD---ETFKCNLSDFSTAK  155 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~---~~~~~kl~DFGla~  155 (340)
                      .|||+|.+|+-+++.+..     ++|++++.|+-||+.||.||..-..+|||-||||.|||+.   ..|.+||+|||+++
T Consensus       547 LEYceGNDLDFYLKQhkl-----mSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSK  621 (775)
T KOG1151|consen  547 LEYCEGNDLDFYLKQHKL-----MSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSK  621 (775)
T ss_pred             eeecCCCchhHHHHhhhh-----hhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhh
Confidence            999999999999999877     9999999999999999999998557899999999999994   46889999999999


Q ss_pred             eecccCCc--------ceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHH
Q 019481          156 VSAVENAD--------LTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWN  227 (340)
Q Consensus       156 ~~~~~~~~--------~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (340)
                      .+.++...        ....||-+|.+|+-+.-           |..+-......+.|+     .|.+.....-|..||.
T Consensus       622 IMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvV-----------gkePPKIsnKVDVWS-----vGVIFyQClYGrKPFG  685 (775)
T KOG1151|consen  622 IMDDDSYNSVDGMELTSQGAGTYWYLPPECFVV-----------GKEPPKISNKVDVWS-----VGVIFYQCLYGRKPFG  685 (775)
T ss_pred             hccCCccCcccceeeecccCceeeecCcceeec-----------CCCCCccccceeeEe-----eehhhhhhhccCCCCC
Confidence            98764322        23467887877754321           211222222334466     5555555555555543


Q ss_pred             HHHH--HHHHHHhhhhccccccCcCC------ccccccccccCCCCchHHHHhhcCcce
Q 019481          228 NFLY--LLLIATLLSTITFLSALKIT------GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       228 ~~~~--~~~~~~~~~~~~~~~~~~~p------~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ....  .++....+...+--..|.-|      ..|...||.+.-..|..+.+|..|||+
T Consensus       686 hnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyl  744 (775)
T KOG1151|consen  686 HNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYL  744 (775)
T ss_pred             CchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccc
Confidence            2111  11111111111111112222      345668999999999999999999999

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.96  E-value=7.4e-30  Score=222.54  Aligned_cols=239  Identities=15%  Similarity=0.139  Sum_probs=161.1

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc----CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI----TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      ..|+||.||++++..++..+++|+.+..    ........+.+|++++++++||||+++++++..       ....++++
T Consensus         9 g~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~~lv~   81 (260)
T cd08222           9 GKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLE-------RDAFCIIT   81 (260)
T ss_pred             cCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhc-------CCceEEEE
Confidence            3789999999999887777777776531    112233456789999999999999999997653       33567899


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      ||+++++|.+++..... ....+++..+..++.|+++||.|||+  .+++|+||||+||+++. +.+||+|||+++....
T Consensus        82 e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~--~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~  157 (260)
T cd08222          82 EYCEGRDLDCKLEELKH-TGKTLSENQVCEWFIQLLLGVHYMHQ--RRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMG  157 (260)
T ss_pred             EeCCCCCHHHHHHHHhh-cccccCHHHHHHHHHHHHHHHHHHHH--cCccccCCChhheEeec-CCEeecccCceeecCC
Confidence            99999999998864221 01348999999999999999999999  88999999999999975 5799999999987644


Q ss_pred             cC-CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHH
Q 019481          160 EN-ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIAT  237 (340)
Q Consensus       160 ~~-~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (340)
                      .. ......|++.|++|+.+.+.+.. ..|+|+.|...+.+....  .|+.....                   ..... 
T Consensus       158 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~--~~~~~~~~-------------------~~~~~-  215 (260)
T cd08222         158 SCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLA--HAFEGQNF-------------------LSVVL-  215 (260)
T ss_pred             CcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCC--CCCCCccH-------------------HHHHH-
Confidence            32 22344567778777543222111 234555444443332222  22211111                   00000 


Q ss_pred             hhhhccccccCcCCcc-------ccccccccCCCCchHHHHhhcCcce
Q 019481          238 LLSTITFLSALKITGC-------KSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       238 ~~~~~~~~~~~~~p~~-------~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                         .+.....+..+..       +...|++.||++||++.++++|||+
T Consensus       216 ---~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         216 ---RIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             ---HHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence               0001111222222       2336799999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.96  E-value=6.7e-30  Score=231.77  Aligned_cols=177  Identities=18%  Similarity=0.135  Sum_probs=144.0

Q ss_pred             CCcceEEEEEEcCCC----CceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVPFPDD----RDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~----~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|-||.||+|++..-    .--||+|..+........+.|+.|..+|++++|||||+|+|...        +.-.|++||
T Consensus       399 ~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~--------e~P~WivmE  470 (974)
T KOG4257|consen  399 EGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV--------EQPMWIVME  470 (974)
T ss_pred             CCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee--------ccceeEEEe
Confidence            588999999987443    23588999887666677889999999999999999999999443        336789999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      +++-|.|..+++.+..    .++......++.||+.||.|||+  ++.+||||-..|||+.+..-+||+|||++|.+.++
T Consensus       471 L~~~GELr~yLq~nk~----sL~l~tL~ly~~Qi~talaYLeS--krfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~  544 (974)
T KOG4257|consen  471 LAPLGELREYLQQNKD----SLPLRTLTLYCYQICTALAYLES--KRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDD  544 (974)
T ss_pred             cccchhHHHHHHhccc----cchHHHHHHHHHHHHHHHHHHHh--hchhhhhhhhhheeecCcceeeecccchhhhcccc
Confidence            9999999999998876    49999999999999999999999  88999999999999999999999999999988775


Q ss_pred             CCcceeec--cceeeccC-----------ccccchhhhhHhHhCCccc
Q 019481          161 NADLTALD--TSSVSAQS-----------GKTGMEMKMAQLESGGWRA  195 (340)
Q Consensus       161 ~~~~~~~g--t~~~~~p~-----------~~~~~~~~~~~~~s~g~~~  195 (340)
                      .-.....|  ...||+|+           |.|=+++.|.++++.|..+
T Consensus       545 ~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkP  592 (974)
T KOG4257|consen  545 AYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKP  592 (974)
T ss_pred             chhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCc
Confidence            43222222  33467774           5556666666766655444

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.96  E-value=7.3e-30  Score=224.11  Aligned_cols=153  Identities=16%  Similarity=0.130  Sum_probs=120.0

Q ss_pred             CCCcceEEEEEEcC---CCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            4 SAPSFSVLIHVPFP---DDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         4 ~~G~fg~V~~~~~~---~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      ..|+||.||+|.+.   .+++.||+|++... ......+.+.+|++++++++||||+++++++....... .....++++
T Consensus         8 g~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~-~~~~~~~~~   86 (273)
T cd05074           8 GKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKG-RLPIPMVIL   86 (273)
T ss_pred             cCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCC-cccceEEEE
Confidence            46889999999864   35788999998753 23345667889999999999999999999764321100 111346778


Q ss_pred             ccccCCCHHHHhcccCCC-ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec
Q 019481           80 WLMQKKGLENVHIGEHPA-SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      ||+++|+|.+++...... ....+++..+..++.|++.||+|||+  ++|+||||||+||+++.++.+||+|||+++...
T Consensus        87 ~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~--~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~  164 (273)
T cd05074          87 PFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS--KNFIHRDLAARNCMLNENMTVCVADFGLSKKIY  164 (273)
T ss_pred             ecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh--CCEeecccchhhEEEcCCCCEEECccccccccc
Confidence            999999999887532210 01247899999999999999999999  889999999999999999999999999998664


Q ss_pred             c
Q 019481          159 V  159 (340)
Q Consensus       159 ~  159 (340)
                      .
T Consensus       165 ~  165 (273)
T cd05074         165 S  165 (273)
T ss_pred             C
Confidence            3

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.96  E-value=1.1e-29  Score=221.43  Aligned_cols=140  Identities=17%  Similarity=0.239  Sum_probs=118.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      +.|+||.||+|.+. .+..+|+|.+...  ....+.+.+|++++++++|+||+++++.+..        ..+++++||++
T Consensus        15 g~g~~~~vy~~~~~-~~~~~~iK~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------~~~~~v~e~~~   83 (260)
T cd05073          15 GAGQFGEVWMATYN-KHTKVAVKTMKPG--SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK--------EPIYIITEFMA   83 (260)
T ss_pred             cCccceEEEEEEec-CCccEEEEecCCC--hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC--------CCeEEEEEeCC
Confidence            46889999999865 4456999988632  2345678899999999999999999986542        36789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      +|+|.+++.....   ..+++..+..++.|++.||+|||+  .+++||||||+||+++.++.+||+|||++.....
T Consensus        84 ~~~L~~~~~~~~~---~~~~~~~~~~~~~~l~~aL~~lH~--~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~  154 (260)
T cd05073          84 KGSLLDFLKSDEG---SKQPLPKLIDFSAQIAEGMAFIEQ--RNYIHRDLRAANILVSASLVCKIADFGLARVIED  154 (260)
T ss_pred             CCcHHHHHHhCCc---cccCHHHHHHHHHHHHHHHHHHHh--CCccccccCcceEEEcCCCcEEECCCcceeeccC
Confidence            9999999987543   347889999999999999999999  7899999999999999999999999999987644

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.96  E-value=1.8e-30  Score=240.75  Aligned_cols=145  Identities=18%  Similarity=0.226  Sum_probs=130.2

Q ss_pred             CCCcceEEEEEEcCCCC---ceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDR---DDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~---~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .+|.||.||+|+.+..+   ..||||.++....++...+|+.|+.||-+++||||++|.|.       .....-..++.|
T Consensus       638 GaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGV-------VTks~PvMIiTE  710 (996)
T KOG0196|consen  638 GAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGV-------VTKSKPVMIITE  710 (996)
T ss_pred             ecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEE-------EecCceeEEEhh
Confidence            36899999999998766   46999999987778888999999999999999999999994       334446778899


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      ||++|+|+.+|+.+..    .++..+.....+.|+.|++||-+  -+.+||||...|||+|++-..|++|||++|.+.++
T Consensus       711 yMENGsLDsFLR~~DG----qftviQLVgMLrGIAsGMkYLsd--m~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd  784 (996)
T KOG0196|consen  711 YMENGSLDSFLRQNDG----QFTVIQLVGMLRGIASGMKYLSD--MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD  784 (996)
T ss_pred             hhhCCcHHHHHhhcCC----ceEeehHHHHHHHHHHHhHHHhh--cCchhhhhhhhheeeccceEEEeccccceeecccC
Confidence            9999999999999876    49999999999999999999999  66999999999999999999999999999988765


Q ss_pred             C
Q 019481          161 N  161 (340)
Q Consensus       161 ~  161 (340)
                      .
T Consensus       785 ~  785 (996)
T KOG0196|consen  785 P  785 (996)
T ss_pred             C
Confidence            4

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.96  E-value=8.1e-30  Score=219.48  Aligned_cols=177  Identities=16%  Similarity=0.120  Sum_probs=138.4

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCC--C----ccccccccccccccccCCcceeeee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFH--P----NQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~h--p----nIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      .|.||.|-.+.+..++..||+|+++.  ..+..+..+-|+++|+++.+  |    -+|++.+||...+       ...++
T Consensus        99 eGtFGkV~ec~D~~~~~~vAlKIik~--V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrg-------hiCiv  169 (415)
T KOG0671|consen   99 EGTFGKVVECWDRETKEHVALKIIKN--VDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRG-------HICIV  169 (415)
T ss_pred             CCcccceEEEeecCCCceehHHHHHH--HHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccC-------ceEEE
Confidence            59999999999999999999999973  34455667889999999942  2    4788888886433       55589


Q ss_pred             eccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC----------------
Q 019481           79 KWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE----------------  142 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~----------------  142 (340)
                      +|.+ |-|+++++..++.   .+++..+++.+++|++++++|||+  .+++|-||||||||+.+                
T Consensus       170 fell-G~S~~dFlk~N~y---~~fpi~~ir~m~~QL~~sv~fLh~--~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~  243 (415)
T KOG0671|consen  170 FELL-GLSTFDFLKENNY---IPFPIDHIRHMGYQLLESVAFLHD--LKLTHTDLKPENILFVSSEYFKTYNPKKKVCFI  243 (415)
T ss_pred             Eecc-ChhHHHHhccCCc---cccchHHHHHHHHHHHHHHHHHHh--cceeecCCChheEEEeccceEEEeccCCcccee
Confidence            9988 6699999999876   679999999999999999999999  88999999999999942                


Q ss_pred             ----CCceEEeccccceeecccCCcceeeccceeeccCccccchhhhh-HhHhCCcccccc
Q 019481          143 ----TFKCNLSDFSTAKVSAVENADLTALDTSSVSAQSGKTGMEMKMA-QLESGGWRAHDE  198 (340)
Q Consensus       143 ----~~~~kl~DFGla~~~~~~~~~~~~~gt~~~~~p~~~~~~~~~~~-~~~s~g~~~~~~  198 (340)
                          +-.+|++|||.|.....  ...+.+.|..|.|||.+.+.|+... |+||.|+...++
T Consensus       244 r~~ks~~I~vIDFGsAtf~~e--~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~El  302 (415)
T KOG0671|consen  244 RPLKSTAIKVIDFGSATFDHE--HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVEL  302 (415)
T ss_pred             ccCCCcceEEEecCCcceecc--CcceeeeccccCCchheeccCcCCccCceeeeeEEEEe
Confidence                23489999999976543  3456678888888876666554422 444444444333

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.96  E-value=5.7e-30  Score=222.70  Aligned_cols=179  Identities=17%  Similarity=0.148  Sum_probs=134.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|.+.. ++.+|+|.+....  .....+.+|++++++++||||+++++++.       +....++++||++
T Consensus        13 g~g~~g~v~~~~~~~-~~~~~~k~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-------~~~~~~~v~e~~~   82 (256)
T cd05112          13 GSGQFGLVWLGYWLE-KRKVAIKTIREGA--MSEEDFIEEAQVMMKLSHPKLVQLYGVCT-------ERSPICLVFEFME   82 (256)
T ss_pred             cCcccceEEEEEEeC-CCeEEEEECCCCC--CCHHHHHHHHHHHHhCCCCCeeeEEEEEc-------cCCceEEEEEcCC
Confidence            368899999998854 5679999986422  22456889999999999999999999664       3336779999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +|+|.+++.....    .++++.+..++.|++.||+|||+  .+++||||||+||+++.++.+||+|||+++........
T Consensus        83 ~~~L~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lH~--~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~  156 (256)
T cd05112          83 HGCLSDYLRAQRG----KFSQETLLGMCLDVCEGMAYLES--SNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT  156 (256)
T ss_pred             CCcHHHHHHhCcc----CCCHHHHHHHHHHHHHHHHHHHH--CCccccccccceEEEcCCCeEEECCCcceeecccCccc
Confidence            9999999986543    38999999999999999999999  77999999999999999999999999999865432211


Q ss_pred             --ceeeccceeeccCccccchhh-hhHhHhCCcccccc
Q 019481          164 --LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDE  198 (340)
Q Consensus       164 --~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~  198 (340)
                        ....++..|++|+...+..+. ..|+|+.|...+.+
T Consensus       157 ~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el  194 (256)
T cd05112         157 SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEV  194 (256)
T ss_pred             ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHH
Confidence              111234456667533221111 24555555555443

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.96  E-value=2.2e-29  Score=216.36  Aligned_cols=237  Identities=19%  Similarity=0.123  Sum_probs=167.4

Q ss_pred             cceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccCCC
Q 019481            7 SFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKG   86 (340)
Q Consensus         7 ~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~gs   86 (340)
                      +||.||+|++..+++.+|+|++.........+.+.+|++.+++++|+||+++++++..       ....++++|++++++
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-------~~~~~l~~e~~~~~~   73 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFED-------EDKLYLVMEYCDGGD   73 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheee-------CCEEEEEEeCCCCCC
Confidence            5899999999988999999999754333326788999999999999999999996643       246779999999999


Q ss_pred             HHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCccee
Q 019481           87 LENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTA  166 (340)
Q Consensus        87 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~  166 (340)
                      |.+++.....     +++..+..++.+++.++.|||+  .+++|+||+|+||+++.++.++|+|||.+............
T Consensus        74 L~~~~~~~~~-----~~~~~~~~~~~~l~~~l~~lh~--~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~  146 (244)
T smart00220       74 LFDLLKKRGR-----LSEDEARFYARQILSALEYLHS--NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTF  146 (244)
T ss_pred             HHHHHHhccC-----CCHHHHHHHHHHHHHHHHHHHH--cCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccc
Confidence            9999987654     8999999999999999999999  77999999999999999999999999999887665444455


Q ss_pred             eccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhcccc
Q 019481          167 LDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTITFL  245 (340)
Q Consensus       167 ~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (340)
                      .++..|++|+...+.... ..|+|+.|...+....+..+|.  ...                .....   ..........
T Consensus       147 ~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~--~~~----------------~~~~~---~~~~~~~~~~  205 (244)
T smart00220      147 VGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFP--GDD----------------QLLEL---FKKIGKPKPP  205 (244)
T ss_pred             cCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC--CCC----------------cHHHH---HHHHhccCCC
Confidence            677777777533211111 2344544444433322221111  100                00000   0000000000


Q ss_pred             ccCc---CCc---cccccccccCCCCchHHHHhhcCcce
Q 019481          246 SALK---ITG---CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       246 ~~~~---~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ..+.   .+.   .+...|+..||++||+++++++|||+
T Consensus       206 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      206 FPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             CccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence            0000   221   23447899999999999999999996

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.96  E-value=5.1e-29  Score=232.68  Aligned_cols=173  Identities=14%  Similarity=0.067  Sum_probs=122.6

Q ss_pred             CCcceEEEEEEcC----------------CCCceEEEEEeeccCchhhH--------------HHHHHHHHHhhhcCCCc
Q 019481            5 APSFSVLIHVPFP----------------DDRDDVMLKLHELITPLQLR--------------RDDDGKLDSLEEIFHPN   54 (340)
Q Consensus         5 ~G~fg~V~~~~~~----------------~~~~~vAiK~~~~~~~~~~~--------------~~~~~E~~~l~~l~hpn   54 (340)
                      .|+||.||+|.+.                ..++.||+|.++.... ...              +....|+.++.+++|.+
T Consensus       155 ~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~-~~~~~fl~e~~~~~~~~e~~~vE~~~l~~l~~~~  233 (507)
T PLN03224        155 GGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQ-GVRQDFLKTGTLAKGSAETGMVEAYMCAKIKRNP  233 (507)
T ss_pred             cCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccch-hhHHHHHhhhhhhhcccchhHHHHHHHHHhhccc
Confidence            5999999999752                2446799999864221 111              22334677777787665


Q ss_pred             c-----cccccccccccc-ccCCcceeeeeeccccCCCHHHHhcccCCC-------------------ccccCCHHHHHH
Q 019481           55 Q-----VKPSGYWSMNIC-LTGDRRYCWKNKWLMQKKGLENVHIGEHPA-------------------SVRQLRRAERLE  109 (340)
Q Consensus        55 I-----v~l~~~f~~~~~-~~~~~~~~~~~~e~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~  109 (340)
                      +     +++.++|..... ...+....++|+||+++|+|.++++.....                   ....+++..++.
T Consensus       234 l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~  313 (507)
T PLN03224        234 IAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKG  313 (507)
T ss_pred             chhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHH
Confidence            4     677777653211 011233568999999999999998753210                   011256778999


Q ss_pred             HHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCccee--eccceeeccCcccc
Q 019481          110 IVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTA--LDTSSVSAQSGKTG  180 (340)
Q Consensus       110 i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~--~gt~~~~~p~~~~~  180 (340)
                      ++.|+++||.|||+  ++|+||||||+|||++.++.+||+|||+++...........  .+|+.|++||.+..
T Consensus       314 i~~ql~~aL~~lH~--~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~  384 (507)
T PLN03224        314 VMRQVLTGLRKLHR--IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVM  384 (507)
T ss_pred             HHHHHHHHHHHHHH--CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcC
Confidence            99999999999999  78999999999999999999999999999765443322222  34778999976543

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.96  E-value=1.5e-29  Score=204.07  Aligned_cols=174  Identities=13%  Similarity=0.091  Sum_probs=136.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|.|+.|+.|....+++++++|+++.    -..+.+.+|+.||..|+ ||||++|++...+.     ....-.+++||..
T Consensus        48 RGKYSEVFeg~~~~~~eK~ViKiLKP----VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp-----~SktpaLiFE~v~  118 (338)
T KOG0668|consen   48 RGKYSEVFEGINITNNEKCVIKILKP----VKKKKIKREIKILQNLRGGPNIIKLLDIVKDP-----ESKTPSLIFEYVN  118 (338)
T ss_pred             CccHhhHhcccccCCCceEEEeeech----HHHHHHHHHHHHHHhccCCCCeeehhhhhcCc-----cccCchhHhhhhc
Confidence            58899999999999999999999963    33466899999999998 99999999955432     2334457889999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC-CCceEEeccccceeecccCC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE-TFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~-~~~~kl~DFGla~~~~~~~~  162 (340)
                      +.+...+...        ++...++.++.|++.||.|||+  .||+|||+||.|+++|. .-.++|+|+|+|..+-++..
T Consensus       119 n~Dfk~ly~t--------l~d~dIryY~~elLkALdyCHS--~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~e  188 (338)
T KOG0668|consen  119 NTDFKQLYPT--------LTDYDIRYYIYELLKALDYCHS--MGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE  188 (338)
T ss_pred             cccHHHHhhh--------hchhhHHHHHHHHHHHHhHHHh--cCcccccCCcceeeechhhceeeeeecchHhhcCCCce
Confidence            8777766543        7778899999999999999999  77999999999999997 45799999999998877776


Q ss_pred             cceeeccceeeccCccccchhhh--hHhHhCCccccc
Q 019481          163 DLTALDTSSVSAQSGKTGMEMKM--AQLESGGWRAHD  197 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~~--~~~~s~g~~~~~  197 (340)
                      -.....+..+-+|+-.....+.-  .|+||.|+.+..
T Consensus       189 YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~  225 (338)
T KOG0668|consen  189 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS  225 (338)
T ss_pred             eeeeeehhhcCCchheeechhccccHHHHHHHHHHHH
Confidence            66666777777775443333331  255555544433

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.96  E-value=5.4e-30  Score=215.83  Aligned_cols=178  Identities=18%  Similarity=0.120  Sum_probs=139.5

Q ss_pred             EEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccCCCHH
Q 019481           10 VLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLE   88 (340)
Q Consensus        10 ~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~gsL~   88 (340)
                      .|..|.+.-+++.||+|..... ......++..+|...+..++|+||++++.+|....... .....|+|||+|. ++|.
T Consensus        31 ~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~-~~~e~y~v~e~m~-~nl~  108 (369)
T KOG0665|consen   31 IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLE-EFQEVYLVMELMD-ANLC  108 (369)
T ss_pred             eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHH-HHHhHHHHHHhhh-hHHH
Confidence            6888888889999999987652 22333466789999999999999999999997665443 3346789999996 5999


Q ss_pred             HHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCcceeec
Q 019481           89 NVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTALD  168 (340)
Q Consensus        89 ~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~g  168 (340)
                      +.+..  .     ++-+++..+..|++.|++|||+  .+|+||||||+||++..++.+||.|||+|+.-..+-..+.+..
T Consensus       109 ~vi~~--e-----lDH~tis~i~yq~~~~ik~lhs--~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mtpyVv  179 (369)
T KOG0665|consen  109 QVILM--E-----LDHETISYILYQMLCGIKHLHS--AGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMTPYVV  179 (369)
T ss_pred             HHHHH--h-----cchHHHHHHHHHHHHHHHHHHh--cceeecccCcccceecchhheeeccchhhcccCcccccCchhh
Confidence            99983  2     6778999999999999999999  7799999999999999999999999999987655544556677


Q ss_pred             cceeeccCccccchhhhh-HhHhCCcccccc
Q 019481          169 TSSVSAQSGKTGMEMKMA-QLESGGWRAHDE  198 (340)
Q Consensus       169 t~~~~~p~~~~~~~~~~~-~~~s~g~~~~~~  198 (340)
                      |..|.||+...|.++... ++|+.|+...++
T Consensus       180 tRyyrapevil~~~~ke~vdiwSvGci~gEl  210 (369)
T KOG0665|consen  180 TRYYRAPEVILGMGYKENVDIWSVGCIMGEL  210 (369)
T ss_pred             eeeccCchheeccCCcccchhhhhhhHHHHH
Confidence            888888865554442211 455544444444

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.96  E-value=7.6e-29  Score=217.23  Aligned_cols=166  Identities=19%  Similarity=0.205  Sum_probs=130.6

Q ss_pred             CCCcceEEEEEEcCC-CCceEEEEEeecc---------CchhhHHHHHHHHHHhhh-cCCCccccccccccccccccCCc
Q 019481            4 SAPSFSVLIHVPFPD-DRDDVMLKLHELI---------TPLQLRRDDDGKLDSLEE-IFHPNQVKPSGYWSMNICLTGDR   72 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~-~~~~vAiK~~~~~---------~~~~~~~~~~~E~~~l~~-l~hpnIv~l~~~f~~~~~~~~~~   72 (340)
                      ..|+||.||+|.+.. +++.+|+|.+...         .......++.+|+.++.+ ++||||++++++|.       +.
T Consensus         9 g~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~-------~~   81 (269)
T cd08528           9 GSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFL-------EN   81 (269)
T ss_pred             cCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEc-------cC
Confidence            468899999999987 7889999998632         122334557788988865 79999999999765       33


Q ss_pred             ceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccc
Q 019481           73 RYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFS  152 (340)
Q Consensus        73 ~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFG  152 (340)
                      ...++++||+++++|.+++..... ....+++..++.++.|++.||.|||+. .+++|+||||+||+++.++.+||+|||
T Consensus        82 ~~~~lv~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~-~~i~H~dl~~~nil~~~~~~~~l~dfg  159 (269)
T cd08528          82 DRLYIVMDLIEGAPLGEHFNSLKE-KKQRFTEERIWNIFVQMVLALRYLHKE-KRIVHRDLTPNNIMLGEDDKVTITDFG  159 (269)
T ss_pred             CeEEEEEecCCCCcHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHhccC-CceeecCCCHHHEEECCCCcEEEeccc
Confidence            477899999999999998854211 013489999999999999999999951 459999999999999999999999999


Q ss_pred             cceeecccCCcceeeccceeeccCcc
Q 019481          153 TAKVSAVENADLTALDTSSVSAQSGK  178 (340)
Q Consensus       153 la~~~~~~~~~~~~~gt~~~~~p~~~  178 (340)
                      ++.............|+..|++|+..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~Pe~~  185 (269)
T cd08528         160 LAKQKQPESKLTSVVGTILYSCPEIV  185 (269)
T ss_pred             ceeecccccccccccCcccCcChhhh
Confidence            99876654433445677778887543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.96  E-value=2.1e-29  Score=227.07  Aligned_cols=239  Identities=15%  Similarity=0.157  Sum_probs=166.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|-||.|.+|... ++..||+|.++.........+|.+|+++|.+|+|||||+|.|.     |+.++. +| +++|||++
T Consensus       548 eGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGV-----C~~DeP-ic-mI~EYmEn  619 (807)
T KOG1094|consen  548 EGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGV-----CVQDDP-LC-MITEYMEN  619 (807)
T ss_pred             CcccceeEEEEec-CceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEee-----eecCCc-hH-HHHHHHhc
Confidence            6899999999864 4688999999876666667889999999999999999999994     344333 44 78999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCcc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADL  164 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~  164 (340)
                      |+|.+++..+..   +.+..+....++.||++|++||.+  -+++||||.+.|+|+|.++++||+|||++|.+-.++...
T Consensus       620 GDLnqFl~ahea---pt~~t~~~vsi~tqiasgmaYLes--~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~  694 (807)
T KOG1094|consen  620 GDLNQFLSAHEL---PTAETAPGVSICTQIASGMAYLES--LNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYR  694 (807)
T ss_pred             CcHHHHHHhccC---cccccchhHHHHHHHHHHHHHHHh--hchhhccccccceeecCcccEEecCcccccccccCCcee
Confidence            999999998754   124556677799999999999999  669999999999999999999999999998654432111


Q ss_pred             eeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccC--CchhHHHHHHHHHHHHhhhhc
Q 019481          165 TALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKT--ENETWNNFLYLLLIATLLSTI  242 (340)
Q Consensus       165 ~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~  242 (340)
                       .-|  ...-|..+++.|.++.         ..+.+..+.|.     .+.+..|+..  .+.||.+..........+...
T Consensus       695 -vqg--r~vlpiRwmawEsill---------gkFttaSDvWa-----fgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~  757 (807)
T KOG1094|consen  695 -VQG--RAVLPIRWMAWESILL---------GKFTTASDVWA-----FGVTLWEVFMLCREQPYSQLTDEQVVENAGEFF  757 (807)
T ss_pred             -eec--ceeeeeeehhHHHHHh---------ccccchhhhhh-----hHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhc
Confidence             111  1233444555565532         11223334455     3333333333  344555555554444444444


Q ss_pred             ccccc---CcCCcccc-------ccccccCCCCchHHHHhh
Q 019481          243 TFLSA---LKITGCKS-------EEGYKNNSSLNPICQIVN  273 (340)
Q Consensus       243 ~~~~~---~~~p~~~~-------~~~l~~dP~~R~t~~~ll  273 (340)
                      ..+..   +.-|..+.       -.|+.+|..+||+.++|-
T Consensus       758 ~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh  798 (807)
T KOG1094|consen  758 RDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLH  798 (807)
T ss_pred             CCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHH
Confidence            33332   22222221       267999999999999873

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.96  E-value=7.7e-29  Score=231.69  Aligned_cols=240  Identities=20%  Similarity=0.194  Sum_probs=160.0

Q ss_pred             CCCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeecc
Q 019481            3 GSAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         3 ~~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      |+.|+  .||+|...  ++.||||++-    ........+|++.|+..+ |||||++|+       ...++.+.|+..|+
T Consensus       520 Gs~Gt--~Vf~G~ye--~R~VAVKrll----~e~~~~A~rEi~lL~eSD~H~NviRyyc-------~E~d~qF~YIalEL  584 (903)
T KOG1027|consen  520 GSNGT--VVFRGVYE--GREVAVKRLL----EEFFDFAQREIQLLQESDEHPNVIRYYC-------SEQDRQFLYIALEL  584 (903)
T ss_pred             CCCCc--EEEEEeeC--CceehHHHHh----hHhHHHHHHHHHHHHhccCCCceEEEEe-------eccCCceEEEEehH
Confidence            45553  49999974  6789999983    344456789999999995 999999999       45677899999999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC---C--CceEEecccccee
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE---T--FKCNLSDFSTAKV  156 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~---~--~~~kl~DFGla~~  156 (340)
                      |. .+|.+++...... .........+....|+++||++||+  -+|+||||||+||||+.   +  .+++|+|||+++.
T Consensus       585 C~-~sL~dlie~~~~d-~~~~~~i~~~~~l~q~~~GlaHLHs--l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk  660 (903)
T KOG1027|consen  585 CA-CSLQDLIESSGLD-VEMQSDIDPISVLSQIASGLAHLHS--LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK  660 (903)
T ss_pred             hh-hhHHHHHhccccc-hhhcccccHHHHHHHHHHHHHHHHh--cccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence            97 4999999985110 0111114568899999999999999  55999999999999976   3  4699999999999


Q ss_pred             ecccCCcc----eeeccceeeccCccccc-hhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHH
Q 019481          157 SAVENADL----TALDTSSVSAQSGKTGM-EMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLY  231 (340)
Q Consensus       157 ~~~~~~~~----~~~gt~~~~~p~~~~~~-~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (340)
                      +..+....    +..||..|+|||...+- .-...|+++.|+.+|...++ +.-||.+...  -..+|.++......+..
T Consensus       661 l~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltg-G~HpFGd~~~--R~~NIl~~~~~L~~L~~  737 (903)
T KOG1027|consen  661 LAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTG-GSHPFGDSLE--RQANILTGNYTLVHLEP  737 (903)
T ss_pred             cCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecC-CccCCCchHH--hhhhhhcCccceeeecc
Confidence            87765433    34577777777533221 11133566666555543222 1234333211  11122222211111100


Q ss_pred             HHHHHHhhhhccccccCcCCccccccccccCCCCchHHHHhhcCcce
Q 019481          232 LLLIATLLSTITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ..              -....++...++..||..||+|.+++.||+|
T Consensus       738 ~~--------------d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlF  770 (903)
T KOG1027|consen  738 LP--------------DCEAKDLISRMLNPDPQLRPSATDVLNHPLF  770 (903)
T ss_pred             Cc--------------hHHHHHHHHHhcCCCcccCCCHHHHhCCCcc
Confidence            00              0011344557789999999999999999999

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.8e-30  Score=214.55  Aligned_cols=161  Identities=19%  Similarity=0.163  Sum_probs=127.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeec-cCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHEL-ITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~-~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||+||.+++..+|+.||+|.+.. .......+++.+|+.+|...+|.|++...+..+.....+-+  ..|++.|+|.
T Consensus        63 YGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFq--EiYV~TELmQ  140 (449)
T KOG0664|consen   63 YGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQ--ELYVLTELMQ  140 (449)
T ss_pred             ccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHH--HHHHHHHHHH
Confidence            69999999999999999999998864 23334457889999999999999999888754432111111  3567889996


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                       .+|..+|-.-..     ++.+.+.-+.+||++||+|||+  -+|+||||||.|.|+++|..+||||||+||..+.++..
T Consensus       141 -SDLHKIIVSPQ~-----Ls~DHvKVFlYQILRGLKYLHs--A~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~  212 (449)
T KOG0664|consen  141 -SDLHKIIVSPQA-----LTPDHVKVFVYQILRGLKYLHT--ANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRL  212 (449)
T ss_pred             -hhhhheeccCCC-----CCcchhhhhHHHHHhhhHHHhh--cchhhccCCCccEEeccCceEEecccccccccchhhhh
Confidence             599998886544     9999999999999999999999  55999999999999999999999999999976654321


Q ss_pred             --ceeeccceeecc
Q 019481          164 --LTALDTSSVSAQ  175 (340)
Q Consensus       164 --~~~~gt~~~~~p  175 (340)
                        ....-|-.|.||
T Consensus       213 hMTqEVVTQYYRAP  226 (449)
T KOG0664|consen  213 NMTHEVVTQYYRAP  226 (449)
T ss_pred             hhHHHHHHHHhccH
Confidence              122335555555

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.96  E-value=2.4e-28  Score=217.00  Aligned_cols=188  Identities=15%  Similarity=0.128  Sum_probs=129.6

Q ss_pred             CCCcceEEEEEEcCCC---CceEEEEEeeccCchhh----------HHHHHHHHHHhhhcCCCccccccccccccccccC
Q 019481            4 SAPSFSVLIHVPFPDD---RDDVMLKLHELITPLQL----------RRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTG   70 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~---~~~vAiK~~~~~~~~~~----------~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~   70 (340)
                      ..|+||.||+|.+..+   ++.+|+|+.........          ......+...+..++|+||+++++......   .
T Consensus        21 G~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~---~   97 (294)
T PHA02882         21 GCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSFKR---C   97 (294)
T ss_pred             ecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeEec---C
Confidence            3699999999998877   67788887553221110          011223344566778999999998543221   1


Q ss_pred             CcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEec
Q 019481           71 DRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSD  150 (340)
Q Consensus        71 ~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~D  150 (340)
                      ...+.+++++++. .++.+.+.....     .++..+..++.|++.||+|||+  ++|+||||||+|||++.++++||+|
T Consensus        98 ~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~--~~iiHrDiKp~Nill~~~~~~~l~D  169 (294)
T PHA02882         98 RMYYRFILLEKLV-ENTKEIFKRIKC-----KNKKLIKNIMKDMLTTLEYIHE--HGISHGDIKPENIMVDGNNRGYIID  169 (294)
T ss_pred             CceEEEEEEehhc-cCHHHHHHhhcc-----CCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCcEEEEE
Confidence            1224567777764 477777766544     6888999999999999999999  7899999999999999999999999


Q ss_pred             cccceeecccCC--------cceeeccceeeccCccccchhh-hhHhHhCCcccccccccc
Q 019481          151 FSTAKVSAVENA--------DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       151 FGla~~~~~~~~--------~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~  202 (340)
                      ||+|+.+.....        .....||+.|++|+...+..+. ..|+||.|...+.+.++.
T Consensus       170 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~  230 (294)
T PHA02882        170 YGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIK  230 (294)
T ss_pred             cCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            999987643221        1234688888888544333222 236666666555554444

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.95  E-value=6.5e-29  Score=225.40  Aligned_cols=143  Identities=17%  Similarity=0.168  Sum_probs=126.4

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      +|.||.||.|++++-...||+|.++  .+.-..++|+.|..+|+.++|||+|+|+|...       -+--.|++.|||..
T Consensus       277 GGQYGeVYeGvWKkyslTvAVKtLK--EDtMeveEFLkEAAvMKeikHpNLVqLLGVCT-------~EpPFYIiTEfM~y  347 (1157)
T KOG4278|consen  277 GGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT-------HEPPFYIITEFMCY  347 (1157)
T ss_pred             CCcccceeeeeeeccceeeehhhhh--hcchhHHHHHHHHHHHHhhcCccHHHHhhhhc-------cCCCeEEEEecccC
Confidence            6899999999999999999999996  33455788999999999999999999999443       22246799999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      |+|.++|+...+   ..++-...+.++.||.+|+.||..  +++|||||-..|+|+.++.-+|++|||++|.+..+.
T Consensus       348 GNLLdYLRecnr---~ev~avvLlyMAtQIsSaMeYLEk--knFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDT  419 (1157)
T KOG4278|consen  348 GNLLDYLRECNR---SEVPAVVLLYMATQISSAMEYLEK--KNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDT  419 (1157)
T ss_pred             ccHHHHHHHhch---hhcchhHHHHHHHHHHHHHHHHHH--hhhhhhhhhhhhccccccceEEeeccchhhhhcCCc
Confidence            999999999876   457777788899999999999999  999999999999999999999999999999887643

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.95  E-value=1.9e-28  Score=224.94  Aligned_cols=238  Identities=16%  Similarity=0.121  Sum_probs=170.9

Q ss_pred             CCcceEEEEEEcCC-CC--ceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPD-DR--DDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~-~~--~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||+|++|.++. +|  ..||||+++.........+|++|+.+|.+|+|||+|+|||...       + .-..+|+|+
T Consensus       120 ~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl-------~-qp~mMV~EL  191 (1039)
T KOG0199|consen  120 EGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVL-------D-QPAMMVFEL  191 (1039)
T ss_pred             CcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeec-------c-chhhHHhhh
Confidence            69999999998865 33  3589999987666667899999999999999999999999433       2 245588999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      ++.|||.+.|++...   ..|.......|+.||+.|++||.+  ++.|||||-..|+|+.....+||+||||.|.+..++
T Consensus       192 aplGSLldrLrka~~---~~llv~~Lcdya~QiA~aM~YLes--krlvHRDLAARNlllasprtVKI~DFGLmRaLg~ne  266 (1039)
T KOG0199|consen  192 APLGSLLDRLRKAKK---AILLVSRLCDYAMQIAKAMQYLES--KRLVHRDLAARNLLLASPRTVKICDFGLMRALGENE  266 (1039)
T ss_pred             cccchHHHHHhhccc---cceeHHHHHHHHHHHHHHHHHHhh--hhhhhhhhhhhhheecccceeeeecccceeccCCCC
Confidence            999999999998433   458889999999999999999999  999999999999999999999999999999998876


Q ss_pred             CcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccC-CchhHHHHHHHHHHHHhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKT-ENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~  240 (340)
                      ......+  .---|..+.+||.+..-         .+....+.|.     .|.+.+||-+ |+.+|....-..    .+.
T Consensus       267 d~Yvm~p--~rkvPfAWCaPEsLrh~---------kFShaSDvWm-----yGVTiWEMFtyGEePW~G~~g~q----IL~  326 (1039)
T KOG0199|consen  267 DMYVMAP--QRKVPFAWCAPESLRHR---------KFSHASDVWM-----YGVTIWEMFTYGEEPWVGCRGIQ----ILK  326 (1039)
T ss_pred             cceEecC--CCcCcccccCHhHhccc---------cccccchhhh-----hhhhHHhhhccCCCCCCCCCHHH----HHH
Confidence            5543222  12223444555655221         1111223344     4444444444 555555433331    122


Q ss_pred             hccccccCcCCccccc-------cccccCCCCchHHHHhhcC
Q 019481          241 TITFLSALKITGCKSE-------EGYKNNSSLNPICQIVNQH  275 (340)
Q Consensus       241 ~~~~~~~~~~p~~~~~-------~~l~~dP~~R~t~~~ll~h  275 (340)
                      .+..++...-|+.+++       +|+..+|..|||...|...
T Consensus       327 ~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~  368 (1039)
T KOG0199|consen  327 NIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED  368 (1039)
T ss_pred             hccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence            3334444333444433       7899999999997776533

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.95  E-value=2.1e-28  Score=220.43  Aligned_cols=161  Identities=16%  Similarity=0.167  Sum_probs=137.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCch--hh-----HHHHHHHHHHhhhcC---CCccccccccccccccccCCcce
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPL--QL-----RRDDDGKLDSLEEIF---HPNQVKPSGYWSMNICLTGDRRY   74 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~--~~-----~~~~~~E~~~l~~l~---hpnIv~l~~~f~~~~~~~~~~~~   74 (340)
                      .|+||.|+.|+++.+...|++|.+.+..-.  .+     .-.+-.|++||..++   |+||++++++|+       |.++
T Consensus       571 ~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE-------ddd~  643 (772)
T KOG1152|consen  571 EGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE-------DDDY  643 (772)
T ss_pred             ccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee-------cCCe
Confidence            699999999999999999999999763211  11     122567999999998   999999999776       5558


Q ss_pred             eeeeec-cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccc
Q 019481           75 CWKNKW-LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFST  153 (340)
Q Consensus        75 ~~~~~e-~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl  153 (340)
                      .|+.+| .=+|-+|+++|....+     ++|.++..|++||+-|+++||+  ++|+|||||-+|+.++.+|-+||+|||.
T Consensus       644 yyl~te~hg~gIDLFd~IE~kp~-----m~E~eAk~IFkQV~agi~hlh~--~~ivhrdikdenvivd~~g~~klidfgs  716 (772)
T KOG1152|consen  644 YYLETEVHGEGIDLFDFIEFKPR-----MDEPEAKLIFKQVVAGIKHLHD--QGIVHRDIKDENVIVDSNGFVKLIDFGS  716 (772)
T ss_pred             eEEEecCCCCCcchhhhhhccCc-----cchHHHHHHHHHHHhccccccc--cCceecccccccEEEecCCeEEEeeccc
Confidence            889998 4567799999999887     9999999999999999999999  8899999999999999999999999999


Q ss_pred             ceeecccCCcceeeccceeeccCcccc
Q 019481          154 AKVSAVENADLTALDTSSVSAQSGKTG  180 (340)
Q Consensus       154 a~~~~~~~~~~~~~gt~~~~~p~~~~~  180 (340)
                      |...+ +.+-.++.||..|.||+...|
T Consensus       717 aa~~k-sgpfd~f~gtv~~aapevl~g  742 (772)
T KOG1152|consen  717 AAYTK-SGPFDVFVGTVDYAAPEVLGG  742 (772)
T ss_pred             hhhhc-CCCcceeeeeccccchhhhCC
Confidence            87554 455778999999999954443

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.95  E-value=1.8e-27  Score=243.47  Aligned_cols=165  Identities=17%  Similarity=0.201  Sum_probs=131.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|++..+++.||+|.++....     ...+|++++++++|||||++++++.+       ....+++|||++
T Consensus       699 g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~l~~l~HpnIv~~~~~~~~-------~~~~~lv~Ey~~  766 (968)
T PLN00113        699 SRGKKGASYKGKSIKNGMQFVVKEINDVNS-----IPSSEIADMGKLQHPNIVKLIGLCRS-------EKGAYLIHEYIE  766 (968)
T ss_pred             ccCCCeeEEEEEECCCCcEEEEEEccCCcc-----ccHHHHHHHhhCCCCCcceEEEEEEc-------CCCCEEEEeCCC
Confidence            368999999999998999999999864221     12356889999999999999997653       335779999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhc-CCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHS-SEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      +|+|.++++.        ++|..+..++.||++||+|||+ +.++|+||||||+||+++.++..++. ||.+......  
T Consensus       767 ~g~L~~~l~~--------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~--  835 (968)
T PLN00113        767 GKNLSEVLRN--------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD--  835 (968)
T ss_pred             CCcHHHHHhc--------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC--
Confidence            9999999963        7899999999999999999994 22789999999999999999888876 6665543222  


Q ss_pred             cceeeccceeeccC-----------ccccchhhhhHhHhCC
Q 019481          163 DLTALDTSSVSAQS-----------GKTGMEMKMAQLESGG  192 (340)
Q Consensus       163 ~~~~~gt~~~~~p~-----------~~~~~~~~~~~~~s~g  192 (340)
                       .+..||+.|+|||           |+|+.|+++++++++.
T Consensus       836 -~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~  875 (968)
T PLN00113        836 -TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGK  875 (968)
T ss_pred             -CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCC
Confidence             2336788899996           5566666666666643

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=3e-27  Score=207.18  Aligned_cols=158  Identities=16%  Similarity=0.175  Sum_probs=128.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhh--cCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEE--IFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~--l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|-||.||+|.++  |+.||||++..    .+.+...||.+|.+.  |+|+||+.+++.=-.+   -..-...|++.+|
T Consensus       220 GkGRyGEVwrG~wr--Ge~VAVKiF~s----rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~---~gs~TQLwLvTdY  290 (513)
T KOG2052|consen  220 GKGRFGEVWRGRWR--GEDVAVKIFSS----RDERSWFRETEIYQTVMLRHENILGFIAADNKD---NGSWTQLWLVTDY  290 (513)
T ss_pred             cCccccceeecccc--CCceEEEEecc----cchhhhhhHHHHHHHHHhccchhhhhhhccccC---CCceEEEEEeeec
Confidence            36999999999986  67899999963    334556778888766  5999999998832111   1122257999999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhc------CCCceecCCCCCCcEEecCCCceEEeccccce
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHS------SEKQVIYRDFKAPNILLDETFKCNLSDFSTAK  155 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~------~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~  155 (340)
                      -+.|||+|+|..+.      ++.+....++..+++||+|||-      .+..|.|||||+.|||+..+|..-|+|+|||.
T Consensus       291 He~GSL~DyL~r~t------v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv  364 (513)
T KOG2052|consen  291 HEHGSLYDYLNRNT------VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  364 (513)
T ss_pred             ccCCcHHHHHhhcc------CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeE
Confidence            99999999999844      8999999999999999999996      13579999999999999999999999999997


Q ss_pred             eeccc-----CCcceeeccceeeccC
Q 019481          156 VSAVE-----NADLTALDTSSVSAQS  176 (340)
Q Consensus       156 ~~~~~-----~~~~~~~gt~~~~~p~  176 (340)
                      .....     ......+||..|||||
T Consensus       365 ~h~~~t~~idi~~N~rVGTKRYMAPE  390 (513)
T KOG2052|consen  365 RHDSDTDTIDIPPNPRVGTKRYMAPE  390 (513)
T ss_pred             EecccCCcccCCCCCccceeeccChH
Confidence            65443     2345679999999996

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.95  E-value=2.4e-27  Score=231.70  Aligned_cols=175  Identities=15%  Similarity=0.132  Sum_probs=142.9

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|++..+++.||+|+++...  .......+.+|+++++.++||||+++++++.       +..+.+++|||
T Consensus        13 G~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-------~~~~~~lVmEy   85 (669)
T cd05610          13 SRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQ-------SANNVYLVMEY   85 (669)
T ss_pred             ecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEE-------ECCEEEEEEeC
Confidence            36899999999999999999999997522  2334567889999999999999999998654       34478899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++++|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++......
T Consensus        86 ~~g~~L~~li~~~~~-----l~~~~~~~i~~qil~aL~yLH~--~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~~~~  158 (669)
T cd05610          86 LIGGDVKSLLHIYGY-----FDEEMAVKYISEVALALDYLHR--HGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLNRE  158 (669)
T ss_pred             CCCCCHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCEEeCCccHHHEEEcCCCCEEEEeCCCCccccCCc
Confidence            999999999987655     8999999999999999999999  779999999999999999999999999998765432


Q ss_pred             -CcceeeccceeeccCcc--ccchhhhhHhHhCC
Q 019481          162 -ADLTALDTSSVSAQSGK--TGMEMKMAQLESGG  192 (340)
Q Consensus       162 -~~~~~~gt~~~~~p~~~--~~~~~~~~~~~s~g  192 (340)
                       ......+|+.|++|+..  ..++.....+++.|
T Consensus       159 ~~~~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g  192 (669)
T cd05610         159 LNMMDILTTPSMAKPKNDYSRTPGQVLSLISSLG  192 (669)
T ss_pred             ccccccccCccccCccccccCCCCceeeeeeecC
Confidence             33456788889998643  23444444444444

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.94  E-value=1.6e-27  Score=212.44  Aligned_cols=188  Identities=15%  Similarity=0.096  Sum_probs=147.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC------CCccccccccccccccccCCcceeee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF------HPNQVKPSGYWSMNICLTGDRRYCWK   77 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~------hpnIv~l~~~f~~~~~~~~~~~~~~~   77 (340)
                      ..|-||.|.+|.+..-+..||||+|..  .+-..+.=++|+++|++|+      --|+++|+..|.+.+       ++++
T Consensus       441 GkGvFs~Vvra~D~~r~~~vAiKIIRn--NE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hkn-------HLCl  511 (752)
T KOG0670|consen  441 GKGVFSTVVRARDQARGQEVAIKIIRN--NEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKN-------HLCL  511 (752)
T ss_pred             ccceeeeeeeccccCCCCeeEEEEeec--chHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcc-------eeEE
Confidence            368899999999999999999999974  2233455688999999996      348999999887654       5668


Q ss_pred             eeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCC-CceEEecccccee
Q 019481           78 NKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDET-FKCNLSDFSTAKV  156 (340)
Q Consensus        78 ~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~-~~~kl~DFGla~~  156 (340)
                      |+|-+. .+|.+++++.+.+  .+|....++.|+.|+..||..|-.|+  |+|.||||+|||+++. ..+||||||.|..
T Consensus       512 VFE~Ls-lNLRevLKKyG~n--vGL~ikaVRsYaqQLflALklLK~c~--vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~  586 (752)
T KOG0670|consen  512 VFEPLS-LNLREVLKKYGRN--VGLHIKAVRSYAQQLFLALKLLKKCG--VLHADIKPDNILVNESKNILKLCDFGSASF  586 (752)
T ss_pred             Eehhhh-chHHHHHHHhCcc--cceeehHHHHHHHHHHHHHHHHHhcC--eeecccCccceEeccCcceeeeccCccccc
Confidence            999885 5999999998874  67889999999999999999999977  9999999999999985 5689999999988


Q ss_pred             ecccCCcceeeccceeeccCccccchhhhh-HhHhCCccccccccccccCC
Q 019481          157 SAVENADLTALDTSSVSAQSGKTGMEMKMA-QLESGGWRAHDEAEKAFQWP  206 (340)
Q Consensus       157 ~~~~~~~~~~~gt~~~~~p~~~~~~~~~~~-~~~s~g~~~~~~~~~~~~~~  206 (340)
                      ..+++-+ .+.-+.-|.||+-+.|..+... ++||.|++.|++-++...+|
T Consensus       587 ~~eneit-PYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFp  636 (752)
T KOG0670|consen  587 ASENEIT-PYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFP  636 (752)
T ss_pred             ccccccc-HHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecC
Confidence            7665532 2223444677766666555533 67777777777655554444

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.94  E-value=3.5e-27  Score=220.02  Aligned_cols=146  Identities=16%  Similarity=0.211  Sum_probs=127.1

Q ss_pred             CCCcceEEEEEEcCCCCc----eEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            4 SAPSFSVLIHVPFPDDRD----DVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~----~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      .+|+||+||+|.....++    +||+|++......+..++++.|+-+|.+++|||+++|++.-..+        ..-+++
T Consensus       705 GsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s--------~~qlvt  776 (1177)
T KOG1025|consen  705 GSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS--------TLQLVT  776 (1177)
T ss_pred             ccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc--------hHHHHH
Confidence            379999999998754444    68999998766666778899999999999999999999954322        255888


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      +||+.|+|.++++.+..    .+-.+..+.|..||++|++|||.  ++.+||||-..|+|+.+..++||.|||+|+.+..
T Consensus       777 q~mP~G~LlDyvr~hr~----~igsq~lLnw~~QIAkgM~YLe~--qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~  850 (1177)
T KOG1025|consen  777 QLMPLGCLLDYVREHRD----NIGSQDLLNWCYQIAKGMKYLEE--QRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAP  850 (1177)
T ss_pred             HhcccchHHHHHHHhhc----cccHHHHHHHHHHHHHHHHHHHh--cchhhhhhhhhheeecCCCeEEEEecchhhccCc
Confidence            99999999999998776    48889999999999999999999  8899999999999999999999999999998877


Q ss_pred             cCCc
Q 019481          160 ENAD  163 (340)
Q Consensus       160 ~~~~  163 (340)
                      +...
T Consensus       851 d~~e  854 (1177)
T KOG1025|consen  851 DEKE  854 (1177)
T ss_pred             cccc
Confidence            6543

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.93  E-value=5.3e-25  Score=184.63  Aligned_cols=160  Identities=23%  Similarity=0.285  Sum_probs=131.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ++|++|.||++.+..+++.+++|+..........+.+.+|++.++.++|++|+++++++...       ...++++|+++
T Consensus         2 ~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-------~~~~~~~e~~~   74 (215)
T cd00180           2 GEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDE-------NHLYLVMEYCE   74 (215)
T ss_pred             CcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecC-------CeEEEEEecCC
Confidence            47899999999998889999999997543322356789999999999999999999976533       46779999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC-CCceEEeccccceeecccCC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE-TFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~-~~~~kl~DFGla~~~~~~~~  162 (340)
                      +++|.+++.....    .+++..+..++.++++++++||+  .+++|+||+|.||+++. +++++|+|||.+........
T Consensus        75 ~~~l~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh~--~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~  148 (215)
T cd00180          75 GGSLKDLLKENEG----KLSEDEILRILLQILEGLEYLHS--NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS  148 (215)
T ss_pred             CCcHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc
Confidence            9999999987632    28999999999999999999999  78999999999999999 89999999999987654321


Q ss_pred             -cceeeccceeeccC
Q 019481          163 -DLTALDTSSVSAQS  176 (340)
Q Consensus       163 -~~~~~gt~~~~~p~  176 (340)
                       .....+...|++|+
T Consensus       149 ~~~~~~~~~~~~~pe  163 (215)
T cd00180         149 LLKTIVGTPAYMAPE  163 (215)
T ss_pred             hhhcccCCCCccChh
Confidence             11223444455553

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=1.1e-25  Score=199.37  Aligned_cols=126  Identities=17%  Similarity=0.116  Sum_probs=109.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-----C---CccccccccccccccccCCcceee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-----H---PNQVKPSGYWSMNICLTGDRRYCW   76 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-----h---pnIv~l~~~f~~~~~~~~~~~~~~   76 (340)
                      -|-|++||+|.+..+.+.||+|+.+.  .....+....||++|++++     |   ..||+|++.|...   -.++.+++
T Consensus        88 WGHFSTVWLawDtq~~r~VAlKVvKS--AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs---GpNG~HVC  162 (590)
T KOG1290|consen   88 WGHFSTVWLAWDTQNKRYVALKVVKS--AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS---GPNGQHVC  162 (590)
T ss_pred             ccccceeEEEeeccCCeEEEEEEEeh--hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec---CCCCcEEE
Confidence            38899999999999999999999973  2344566789999999984     2   4899999999755   34667888


Q ss_pred             eeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhc-CCCceecCCCCCCcEEec
Q 019481           77 KNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHS-SEKQVIYRDFKAPNILLD  141 (340)
Q Consensus        77 ~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~~~iiHrDlKp~NILl~  141 (340)
                      +|+|++ |-+|..+|.....   ++++...+++|++||+.||.|||. |+  |||-||||+|||+.
T Consensus       163 MVfEvL-GdnLLklI~~s~Y---rGlpl~~VK~I~~qvL~GLdYLH~ecg--IIHTDlKPENvLl~  222 (590)
T KOG1290|consen  163 MVFEVL-GDNLLKLIKYSNY---RGLPLSCVKEICRQVLTGLDYLHRECG--IIHTDLKPENVLLC  222 (590)
T ss_pred             EEehhh-hhHHHHHHHHhCC---CCCcHHHHHHHHHHHHHHHHHHHHhcC--ccccCCCcceeeee
Confidence            999999 6789999988776   679999999999999999999999 88  99999999999994

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.93  E-value=1.4e-25  Score=201.31  Aligned_cols=149  Identities=15%  Similarity=0.024  Sum_probs=113.2

Q ss_pred             CCCcceEEEEEEcCC-CCceEEEEEeecc----CchhhHHHHHHHHHHhhhcCCCcccc-ccccccccccccCCcceeee
Q 019481            4 SAPSFSVLIHVPFPD-DRDDVMLKLHELI----TPLQLRRDDDGKLDSLEEIFHPNQVK-PSGYWSMNICLTGDRRYCWK   77 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~-~~~~vAiK~~~~~----~~~~~~~~~~~E~~~l~~l~hpnIv~-l~~~f~~~~~~~~~~~~~~~   77 (340)
                      ..|+||+||+|++.. +++.||+|++...    ......+.+.+|+++|++++|+||+. ++++           ...++
T Consensus        27 G~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~-----------~~~~L   95 (365)
T PRK09188         27 KRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT-----------GKDGL   95 (365)
T ss_pred             eecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc-----------CCcEE
Confidence            379999999999876 6788899987532    12234566899999999999999985 5441           14679


Q ss_pred             eeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCC-CCCcEEecCCCceEEecccccee
Q 019481           78 NKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDF-KAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus        78 ~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDl-Kp~NILl~~~~~~kl~DFGla~~  156 (340)
                      +|||++|++|... .   .     ..   ...++.|+++||.|||+  ++|+|||| ||+|||++.++++||+|||+|+.
T Consensus        96 VmE~~~G~~L~~~-~---~-----~~---~~~~~~~i~~aL~~lH~--~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~  161 (365)
T PRK09188         96 VRGWTEGVPLHLA-R---P-----HG---DPAWFRSAHRALRDLHR--AGITHNDLAKPQNWLMGPDGEAAVIDFQLASV  161 (365)
T ss_pred             EEEccCCCCHHHh-C---c-----cc---hHHHHHHHHHHHHHHHH--CCCeeCCCCCcceEEEcCCCCEEEEECcccee
Confidence            9999999999732 1   1     11   14678999999999999  88999999 99999999999999999999997


Q ss_pred             ecccCCc---------ceeeccceeeccCc
Q 019481          157 SAVENAD---------LTALDTSSVSAQSG  177 (340)
Q Consensus       157 ~~~~~~~---------~~~~gt~~~~~p~~  177 (340)
                      +......         .+..++..|++|+-
T Consensus       162 ~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~  191 (365)
T PRK09188        162 FRRRGALYRIAAYEDLRHLLKHKRTYAPDA  191 (365)
T ss_pred             cccCcchhhhhhhhhhhhhhccCccCCccc
Confidence            6543211         23345666666643

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.92  E-value=5e-25  Score=212.52  Aligned_cols=184  Identities=16%  Similarity=0.131  Sum_probs=141.4

Q ss_pred             CCCcceEEEEEEcC----C---CCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCccee
Q 019481            4 SAPSFSVLIHVPFP----D---DRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYC   75 (340)
Q Consensus         4 ~~G~fg~V~~~~~~----~---~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~   75 (340)
                      ..|+||.|++|...    .   ....||+|..+........+.+..|+++|+.+ +||||+.+.|+..       +++..
T Consensus       305 g~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t-------~~~~~  377 (609)
T KOG0200|consen  305 GEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACT-------QDGPL  377 (609)
T ss_pred             ecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeec-------cCCce
Confidence            36999999999743    1   25679999998755557778899999999999 5999999999543       24577


Q ss_pred             eeeeccccCCCHHHHhcccC---------CCccc--cCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC
Q 019481           76 WKNKWLMQKKGLENVHIGEH---------PASVR--QLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF  144 (340)
Q Consensus        76 ~~~~e~~~~gsL~~~l~~~~---------~~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~  144 (340)
                      +++.||+..|+|.++++...         .....  .++......++.||+.|++||++  .+++||||-..|||+..+.
T Consensus       378 ~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~--~~~vHRDLAaRNVLi~~~~  455 (609)
T KOG0200|consen  378 YVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS--VPCVHRDLAARNVLITKNK  455 (609)
T ss_pred             EEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh--CCccchhhhhhhEEecCCC
Confidence            78999999999999999887         11111  38899999999999999999999  8899999999999999999


Q ss_pred             ceEEeccccceeecccCCcce--eec--cceeecc-----------CccccchhhhhHhHhCCcccc
Q 019481          145 KCNLSDFSTAKVSAVENADLT--ALD--TSSVSAQ-----------SGKTGMEMKMAQLESGGWRAH  196 (340)
Q Consensus       145 ~~kl~DFGla~~~~~~~~~~~--~~g--t~~~~~p-----------~~~~~~~~~~~~~~s~g~~~~  196 (340)
                      .+||+|||+|+..........  ..|  ...+|||           .|.||+|+.+.++.+.|.++|
T Consensus       456 ~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PY  522 (609)
T KOG0200|consen  456 VIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPY  522 (609)
T ss_pred             EEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCC
Confidence            999999999996544332211  111  1226666           355666666666666555553

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.92  E-value=1.3e-24  Score=179.62  Aligned_cols=136  Identities=13%  Similarity=0.132  Sum_probs=104.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCch-hh------------------------HHHHHHHHHHhhhcCCCccccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPL-QL------------------------RRDDDGKLDSLEEIFHPNQVKP   58 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~-~~------------------------~~~~~~E~~~l~~l~hpnIv~l   58 (340)
                      ..|+||.||+|.+. +|+.||+|+++..... ..                        .....+|+++++++.++++...
T Consensus         6 g~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~~p   84 (190)
T cd05147           6 STGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIPCP   84 (190)
T ss_pred             ccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
Confidence            46999999999997 8999999999753210 00                        1123459999999988877543


Q ss_pred             cccccccccccCCcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHh-hcCCCceecCCCCCCc
Q 019481           59 SGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFL-HSSEKQVIYRDFKAPN  137 (340)
Q Consensus        59 ~~~f~~~~~~~~~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yL-H~~~~~iiHrDlKp~N  137 (340)
                      ....       ..  ..+++|||++|+++.........     +++..+..++.|++.+|.|+ |+  .+|+||||||+|
T Consensus        85 ~~~~-------~~--~~~iVmE~i~g~~l~~~~~~~~~-----~~~~~~~~i~~qi~~~L~~l~H~--~giiHrDlkP~N  148 (190)
T cd05147          85 EPIL-------LK--SHVLVMEFIGDDGWAAPRLKDAP-----LSESKARELYLQVIQIMRILYQD--CRLVHADLSEYN  148 (190)
T ss_pred             cEEE-------ec--CCEEEEEEeCCCCCcchhhhcCC-----CCHHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHH
Confidence            3311       01  23699999998877655433333     89999999999999999999 68  679999999999


Q ss_pred             EEecCCCceEEeccccceee
Q 019481          138 ILLDETFKCNLSDFSTAKVS  157 (340)
Q Consensus       138 ILl~~~~~~kl~DFGla~~~  157 (340)
                      ||++ ++.++|+|||+|...
T Consensus       149 Ili~-~~~v~LiDFG~a~~~  167 (190)
T cd05147         149 LLYH-DGKLYIIDVSQSVEH  167 (190)
T ss_pred             EEEE-CCcEEEEEccccccC
Confidence            9998 588999999999654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.90  E-value=9.4e-25  Score=190.64  Aligned_cols=131  Identities=22%  Similarity=0.193  Sum_probs=114.3

Q ss_pred             CCcceEEEEEEcCC---CCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVPFPD---DRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~~~~---~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|+|++||+|++..   .++.||+|-+..   .....++.+|+++|..+. +.||+++.+.|.       ..+...+++|
T Consensus        46 eGsFssv~~a~~~~~~~~~~~valk~i~~---ts~p~ri~~El~~L~~~gG~~ni~~~~~~~r-------nnd~v~ivlp  115 (418)
T KOG1167|consen   46 EGSFSSVYKATDIEQDTKRRYVALKAIYR---TSSPSRILNELEMLYRLGGSDNIIKLNGCFR-------NNDQVAIVLP  115 (418)
T ss_pred             ccchhhhhhhhHhhhccccceEeeeeccc---ccCchHHHHHHHHHHHhccchhhhcchhhhc-------cCCeeEEEec
Confidence            69999999999988   888999999964   333456899999999996 899999999664       3336669999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC-CCceEEeccccce
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE-TFKCNLSDFSTAK  155 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~-~~~~kl~DFGla~  155 (340)
                      |++.-+..++...        ++...++.+++.++.||+++|+  +|||||||||+|+|.+. .++-.|.|||+|.
T Consensus       116 ~~~H~~f~~l~~~--------l~~~~i~~Yl~~ll~Al~~~h~--~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~  181 (418)
T KOG1167|consen  116 YFEHDRFRDLYRS--------LSLAEIRWYLRNLLKALAHLHK--NGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQ  181 (418)
T ss_pred             ccCccCHHHHHhc--------CCHHHHHHHHHHHHHHhhhhhc--cCccccCCCccccccccccCCceEEechhHH
Confidence            9999888888875        6778999999999999999999  88999999999999986 6788999999987

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.90  E-value=1.6e-23  Score=178.04  Aligned_cols=161  Identities=20%  Similarity=0.156  Sum_probs=133.6

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      +.|++|.||++.+..+++.+|+|.+.........+.+.+|++.+++++|+|++++++++.       .....++++|+++
T Consensus         8 ~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~-------~~~~~~~v~e~~~   80 (225)
T smart00221        8 GEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFE-------DPEPLYLVMEYCE   80 (225)
T ss_pred             ecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeee-------cCCceEEEEeccC
Confidence            468899999999998899999999975433225678899999999999999999999654       2346779999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC--
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN--  161 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--  161 (340)
                      +++|.+++.....    .+++..+..++.|++.++.+||+  .+++|+||+|+||+++.++.++|+|||++.......  
T Consensus        81 ~~~L~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh~--~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~  154 (225)
T smart00221       81 GGDLFDYLRKKGG----KLSEEEARFYLRQILEALEYLHS--LGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA  154 (225)
T ss_pred             CCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc
Confidence            9999999987653    17899999999999999999999  779999999999999999999999999998776543  


Q ss_pred             CcceeeccceeeccCc
Q 019481          162 ADLTALDTSSVSAQSG  177 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~  177 (340)
                      ......++..|++|+.
T Consensus       155 ~~~~~~~~~~~~~pe~  170 (225)
T smart00221      155 LLKTVKGTPFYLAPEV  170 (225)
T ss_pred             cccceeccCCcCCHhH
Confidence            2234455666666643

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.90  E-value=4.4e-23  Score=171.11  Aligned_cols=138  Identities=15%  Similarity=0.126  Sum_probs=107.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCch-------------------------hhHHHHHHHHHHhhhcCCCccccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPL-------------------------QLRRDDDGKLDSLEEIFHPNQVKP   58 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~-------------------------~~~~~~~~E~~~l~~l~hpnIv~l   58 (340)
                      .+|+||.||+|++. +|+.||+|+++.....                         .....+.+|.+.+.++.|++|...
T Consensus         6 g~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p   84 (190)
T cd05145           6 STGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVPVP   84 (190)
T ss_pred             ecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence            47999999999987 8999999999853210                         001234689999999999988554


Q ss_pred             cccccccccccCCcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhc-CCCceecCCCCCCc
Q 019481           59 SGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHS-SEKQVIYRDFKAPN  137 (340)
Q Consensus        59 ~~~f~~~~~~~~~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~~~iiHrDlKp~N  137 (340)
                      ..+..       .  ..+++|||++|+++.........     +++..+..++.|++.++.++|+ .+  |+||||||+|
T Consensus        85 ~~~~~-------~--~~~lVmE~~~g~~~~~~~l~~~~-----~~~~~~~~i~~~l~~~l~~lH~~~g--ivHrDlkP~N  148 (190)
T cd05145          85 EPILL-------K--KNVLVMEFIGDDGSPAPRLKDVP-----LEEEEAEELYEQVVEQMRRLYQEAG--LVHGDLSEYN  148 (190)
T ss_pred             eEEEe-------c--CCEEEEEEecCCCchhhhhhhcc-----CCHHHHHHHHHHHHHHHHHHHHhCC--EecCCCChhh
Confidence            44221       1  23699999998765443223333     7888999999999999999998 66  9999999999


Q ss_pred             EEecCCCceEEeccccceeecc
Q 019481          138 ILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus       138 ILl~~~~~~kl~DFGla~~~~~  159 (340)
                      |+++ +++++|+|||+|+....
T Consensus       149 Ill~-~~~~~liDFG~a~~~~~  169 (190)
T cd05145         149 ILYH-DGKPYIIDVSQAVELDH  169 (190)
T ss_pred             EEEE-CCCEEEEEcccceecCC
Confidence            9999 89999999999987643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.90  E-value=1.6e-24  Score=216.62  Aligned_cols=205  Identities=8%  Similarity=-0.014  Sum_probs=124.6

Q ss_pred             hhcCC-CccccccccccccccccCCcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCC
Q 019481           48 EEIFH-PNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEK  126 (340)
Q Consensus        48 ~~l~h-pnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~  126 (340)
                      +.++| +||++++++|.....-.......+.++|++ +++|.+++.....    .+++.+++.+++||++||+|||+  +
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~al~~lH~--~   99 (793)
T PLN00181         27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDR----SVDAFECFHVFRQIVEIVNAAHS--Q   99 (793)
T ss_pred             chhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccc----cccHHHHHHHHHHHHHHHHHHHh--C
Confidence            34555 588889998854432222223455677887 5699999976433    49999999999999999999999  8


Q ss_pred             ceecCCCCCCcEEecC-------------------CCceEEeccccceeecccC-----------------Ccceeeccc
Q 019481          127 QVIYRDFKAPNILLDE-------------------TFKCNLSDFSTAKVSAVEN-----------------ADLTALDTS  170 (340)
Q Consensus       127 ~iiHrDlKp~NILl~~-------------------~~~~kl~DFGla~~~~~~~-----------------~~~~~~gt~  170 (340)
                      +|+||||||+||||+.                   ++.+||+|||+++......                 ......||+
T Consensus       100 gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  179 (793)
T PLN00181        100 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMS  179 (793)
T ss_pred             CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCc
Confidence            8999999999999954                   4556677777775432100                 011235677


Q ss_pred             eeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhccccccCcC
Q 019481          171 SVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTITFLSALKI  250 (340)
Q Consensus       171 ~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (340)
                      .|+|||...+..+             .  ...+.|+     .|++..+|.++.+++............ ...........
T Consensus       180 ~Y~APE~~~~~~~-------------~--~~sDVwS-----lGviL~ELl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  238 (793)
T PLN00181        180 WYTSPEEDNGSSS-------------N--CASDVYR-----LGVLLFELFCPVSSREEKSRTMSSLRH-RVLPPQILLNW  238 (793)
T ss_pred             ceEChhhhccCCC-------------C--chhhhhh-----HHHHHHHHhhCCCchhhHHHHHHHHHH-hhcChhhhhcC
Confidence            7888754332111             1  1223355     555555555544444332111100000 00000000011


Q ss_pred             Cc--cccccccccCCCCchHHHHhhcCcceee
Q 019481          251 TG--CKSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       251 p~--~~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                      +.  .+...||+.||.+||++.++++|||+..
T Consensus       239 ~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~  270 (793)
T PLN00181        239 PKEASFCLWLLHPEPSCRPSMSELLQSEFINE  270 (793)
T ss_pred             HHHHHHHHHhCCCChhhCcChHHHhhchhhhh
Confidence            11  1223578999999999999999999943

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.90  E-value=2.4e-23  Score=172.17  Aligned_cols=239  Identities=13%  Similarity=0.091  Sum_probs=160.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|.||.+.+|.++.++..+++|.+..  .....++|.+|..---.|. |.||+.-|+.      -++..++.+.++||++
T Consensus        34 eG~FgkIlL~eHr~s~t~ivlKavp~--p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~v------aFqt~d~YvF~qE~aP  105 (378)
T KOG1345|consen   34 EGRFGKILLAEHRQSKTRIVLKAVPR--PQTTQADFVREFHYSFFLSPHQHIIDTYEV------AFQTSDAYVFVQEFAP  105 (378)
T ss_pred             ccceeeEEeeeccCCceEEEeeccCc--chhhHHHHHHHhccceeeccchhhhHHHHH------HhhcCceEEEeeccCc
Confidence            58999999999999999999999974  3345678999998766665 8999988773      2234447778999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEec-C-CCceEEeccccceeecccC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLD-E-TFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~-~-~~~~kl~DFGla~~~~~~~  161 (340)
                      .|||.+-+...+      +.|.....++.|+++||.|+|+  ++++|||||.+|||+- . ..++||||||+.+..+..-
T Consensus       106 ~gdL~snv~~~G------igE~~~K~v~~ql~SAi~fMHs--knlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV  177 (378)
T KOG1345|consen  106 RGDLRSNVEAAG------IGEANTKKVFAQLLSAIEFMHS--KNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTV  177 (378)
T ss_pred             cchhhhhcCccc------ccHHHHHHHHHHHHHHHHHhhc--cchhhcccccceEEEecCCccEEEeeecccccccCcee
Confidence            999999988754      8899999999999999999999  8899999999999993 2 4589999999987654321


Q ss_pred             CcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      ....  -+..|.+|      |....  .-.+.-...  ...+.|-     .|++.....+|.+||......-.  -.-.-
T Consensus       178 ~~~~--~~~~y~~p------e~~~~--~~ne~~~~~--ps~D~Wq-----fGIi~f~cltG~~PWQka~~~d~--~Y~~~  238 (378)
T KOG1345|consen  178 KYLE--YVNNYHAP------ELCDT--VVNEKLVVN--PSTDIWQ-----FGIIFFYCLTGKFPWQKASIMDK--PYWEW  238 (378)
T ss_pred             hhhh--hhcccCCc------HHHhh--ccccceEec--ccccchh-----eeeeeeeeecCCCcchhhhccCc--hHHHH
Confidence            1111  12334444      32211  111111111  1233466     67777777788888763211100  00000


Q ss_pred             ccccc--cCcCCcc---cccc-------ccccCCCCc---hHHHHhhcCcce
Q 019481          242 ITFLS--ALKITGC---KSEE-------GYKNNSSLN---PICQIVNQHPFY  278 (340)
Q Consensus       242 ~~~~~--~~~~p~~---~~~~-------~l~~dP~~R---~t~~~ll~hp~~  278 (340)
                      ..+..  .+..|..   +++.       -|.++|..|   .++....+..|+
T Consensus       239 ~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~  290 (378)
T KOG1345|consen  239 EQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWK  290 (378)
T ss_pred             HHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHH
Confidence            11111  1344443   3442       277888888   667777777776

>PRK10345 hypothetical protein; Provisional

Probab=99.89  E-value=1.2e-22  Score=169.43  Aligned_cols=133  Identities=11%  Similarity=0.044  Sum_probs=103.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-----CCCccccccccccccccccCCcce-eeee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-----FHPNQVKPSGYWSMNICLTGDRRY-CWKN   78 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~l~~~f~~~~~~~~~~~~-~~~~   78 (340)
                      +|+||.||.  ++.++.. ++|++.... ....+.+.+|+++++++     +||||++++++|+++.    ..++ +.++
T Consensus        12 ~G~~~~Vy~--hp~~~~k-~IKv~~~~~-~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~----g~g~v~~~I   83 (210)
T PRK10345         12 TGRHRKCYA--HPEDAQR-CIKIVYHRG-DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDC----GTGYVYDVI   83 (210)
T ss_pred             CCCceEEEE--CCCCcCe-EEEEEeccc-cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCC----CCeEEEEEE
Confidence            588999995  7667665 688886532 23456789999999999     5799999999887652    1124 4478


Q ss_pred             ecc--ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHH-HHhhcCCCceecCCCCCCcEEecC----CCceEEecc
Q 019481           79 KWL--MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDL-AFLHSSEKQVIYRDFKAPNILLDE----TFKCNLSDF  151 (340)
Q Consensus        79 ~e~--~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L-~yLH~~~~~iiHrDlKp~NILl~~----~~~~kl~DF  151 (340)
                      +||  +++|+|.+++++. .     +++.  ..++.|++.++ +|||+  ++|+||||||+|||++.    +++++|+||
T Consensus        84 ~e~~G~~~~tL~~~l~~~-~-----~~e~--~~~~~~~L~~l~~yLh~--~~IvhrDlKp~NILl~~~~~~~~~~~LiDg  153 (210)
T PRK10345         84 ADFDGKPSITLTEFAEQC-R-----YEED--VAQLRQLLKKLKRYLLD--NRIVTMELKPQNILCQRISESEVIPVVCDN  153 (210)
T ss_pred             ecCCCCcchhHHHHHHcc-c-----ccHh--HHHHHHHHHHHHHHHHH--CCEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence            999  6679999999763 2     6666  36788999888 99999  88999999999999974    347999995


Q ss_pred             ccce
Q 019481          152 STAK  155 (340)
Q Consensus       152 Gla~  155 (340)
                      +-++
T Consensus       154 ~G~~  157 (210)
T PRK10345        154 IGES  157 (210)
T ss_pred             CCCc
Confidence            5443

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.88  E-value=1.3e-22  Score=165.18  Aligned_cols=186  Identities=18%  Similarity=0.147  Sum_probs=146.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCC-CccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFH-PNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~h-pnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .+|+||.+|.|....+|+.||+|+-..   .....++..|..+.+.|++ ..|..+..++.       ++.+-.+|||++
T Consensus        24 GsGSFGdIy~~~~i~~ge~VAiK~Es~---~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~-------e~~ynvlVMdLL   93 (341)
T KOG1163|consen   24 GSGSFGDIYLGISITSGEEVAIKLESS---KAKHPQLLYESKVYRILQGGVGIPHIRHYGT-------EKDYNVLVMDLL   93 (341)
T ss_pred             cCCchhheeeeeeccCCceEEEEeecc---cCCCcchhHHHHHHHHhccCCCCchhhhhcc-------ccccceeeeecc
Confidence            379999999999999999999999864   2334568889999999985 45555554332       555788999998


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC---CCceEEeccccceeecc
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE---TFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~---~~~~kl~DFGla~~~~~  159 (340)
                       |.||.+++.-+.+    .++.++++..+-|++.-++|+|.  ++.|||||||+|.|..-   ..++-++|||+|+.+.+
T Consensus        94 -GPsLEdLfnfC~R----~ftmkTvLMLaDQml~RiEyvH~--r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d  166 (341)
T KOG1163|consen   94 -GPSLEDLFNFCSR----RFTMKTVLMLADQMLSRIEYVHL--RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD  166 (341)
T ss_pred             -CccHHHHHHHHhh----hhhHHhHHHHHHHHHHHHHHHHh--hccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence             7899999988775    49999999999999999999999  88999999999999853   46689999999997765


Q ss_pred             cCC--------cceeeccceeeccCccccchhhh-hHhHhCCccccccccccccCC
Q 019481          160 ENA--------DLTALDTSSVSAQSGKTGMEMKM-AQLESGGWRAHDEAEKAFQWP  206 (340)
Q Consensus       160 ~~~--------~~~~~gt~~~~~p~~~~~~~~~~-~~~~s~g~~~~~~~~~~~~~~  206 (340)
                      ...        .....||..|.+-..-.+.|... .|+.|.|.....+..+..+|-
T Consensus       167 ~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQ  222 (341)
T KOG1163|consen  167 IRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQ  222 (341)
T ss_pred             ccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCccc
Confidence            322        12346777777665555555543 378888888877777776674

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.86  E-value=4.7e-22  Score=189.85  Aligned_cols=244  Identities=13%  Similarity=0.036  Sum_probs=168.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEee----c-cCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHE----L-ITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~----~-~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      .+|++|.|+.++.....+..+.|...    . .........+..|..+-..++|||++.....++..     +...  ..
T Consensus       327 g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~-----~~~~--~~  399 (601)
T KOG0590|consen  327 GSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEI-----DGIL--QS  399 (601)
T ss_pred             eecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhc-----ccch--hh
Confidence            46778888888777666666666543    1 11122223366788888889999998777744322     2222  33


Q ss_pred             eccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec
Q 019481           79 KWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      ||||++ +|+.++.....     +....+..+++|++.|++|+|+  .||.|||+||+|++++.+|.+||+|||.+....
T Consensus       400 mE~~~~-Dlf~~~~~~~~-----~~~~e~~c~fKqL~~Gv~y~h~--~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~  471 (601)
T KOG0590|consen  400 MEYCPY-DLFSLVMSNGK-----LTPLEADCFFKQLLRGVKYLHS--MGLAHRDLKLENLLVTENGILKIIDFGAASVFR  471 (601)
T ss_pred             hhcccH-HHHHHHhcccc-----cchhhhhHHHHHHHHHHHHHHh--cCceeccCccccEEEecCCceEEeecCcceeec
Confidence            999998 99999998765     8889999999999999999999  669999999999999999999999999997665


Q ss_pred             ccC-----CcceeeccceeeccCccccchhh--hhHhHhCCccccccccccccCCCCCCcccccCCCccC------Cchh
Q 019481          159 VEN-----ADLTALDTSSVSAQSGKTGMEMK--MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKT------ENET  225 (340)
Q Consensus       159 ~~~-----~~~~~~gt~~~~~p~~~~~~~~~--~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~  225 (340)
                      ...     .....+|+..|+|||.+.+.++.  ..++|+.|..++.+......|-......... .....      ...+
T Consensus       472 ~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-~~~~~~~~~~~~~~~  550 (601)
T KOG0590|consen  472 YPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-KTNNYSDQRNIFEGP  550 (601)
T ss_pred             cCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-hhhccccccccccCh
Confidence            432     23456899999999888877776  4488998888888776666665333222110 00000      0011


Q ss_pred             HHHHHHHHHHHHhhhhccccccCcCCccccccccccCCCCchHHHHhhcCcce
Q 019481          226 WNNFLYLLLIATLLSTITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ++-...+.. .              -...--..|+.||.+|.|++++++.+|+
T Consensus       551 ~~~~~~lp~-~--------------~~~~~~~~l~~~P~~R~ti~~i~~d~W~  588 (601)
T KOG0590|consen  551 NRLLSLLPR-E--------------TRIIIYRMLQLDPTKRITIEQILNDEWI  588 (601)
T ss_pred             HHHHHhchh-h--------------HHHHHHHHccCChhheecHHHHhhChHh
Confidence            110000000 0              0011114589999999999999999999

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.85  E-value=4.3e-21  Score=163.20  Aligned_cols=185  Identities=17%  Similarity=0.153  Sum_probs=152.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      -|+||+.+.|++.-+++.||||.-..+.   ...++..|.+..+.|. .++|...|-+       -..+.+-.+|+|++ 
T Consensus        38 eGsFG~lf~G~Nl~nne~VAIKfEPrkS---~APQLrdEYr~YKlL~g~~GIP~vYYF-------GqeG~~NiLVidLL-  106 (449)
T KOG1165|consen   38 EGSFGVLFLGKNLYNNEPVAIKFEPRKS---EAPQLRDEYRTYKLLGGTEGIPQVYYF-------GQEGKYNILVIDLL-  106 (449)
T ss_pred             cCcceeeecccccccCceEEEEeccccC---CcchHHHHHHHHHHHcCCCCCCceeee-------ccccchhhhhhhhh-
Confidence            4899999999999999999999986432   3455778888888885 6888877652       34555778999998 


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCC-----CceEEeccccceeec
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDET-----FKCNLSDFSTAKVSA  158 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~-----~~~kl~DFGla~~~~  158 (340)
                      |.||+|++.-+++    .|+.+++..++.|++.-++|+|+  +..|.|||||+|+||...     ..+.|+|||+|+.+.
T Consensus       107 GPSLEDLFD~CgR----~FSvKTV~miA~Qmi~rie~vH~--k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Yr  180 (449)
T KOG1165|consen  107 GPSLEDLFDLCGR----RFSVKTVAMIAKQMITRIEYVHE--KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYR  180 (449)
T ss_pred             CcCHHHHHHHhcC----cccHHhHHHHHHHHHHHHHHHHh--cceeecccCccceeecCCCCCCCceEEEEeccchhhhc
Confidence            8899999998886    49999999999999999999999  889999999999999653     348999999999887


Q ss_pred             ccCC--------cceeeccceeeccCccccchhhhh-HhHhCCccccccccccccCC
Q 019481          159 VENA--------DLTALDTSSVSAQSGKTGMEMKMA-QLESGGWRAHDEAEKAFQWP  206 (340)
Q Consensus       159 ~~~~--------~~~~~gt~~~~~p~~~~~~~~~~~-~~~s~g~~~~~~~~~~~~~~  206 (340)
                      +...        ..+..||..||+-..-.|.|.... |+.+.|-.+..+..+..+|-
T Consensus       181 Dp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQ  237 (449)
T KOG1165|consen  181 DPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQ  237 (449)
T ss_pred             CccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccc
Confidence            6432        234579999999888888887755 77778888888877777774

>smart00090 RIO RIO-like kinase

Probab=99.85  E-value=8.4e-21  Score=162.18  Aligned_cols=139  Identities=14%  Similarity=0.115  Sum_probs=105.6

Q ss_pred             CCCcceEEEEEE-cCCCCceEEEEEeeccCch-----------------------hhHHHHHHHHHHhhhcCCCcccccc
Q 019481            4 SAPSFSVLIHVP-FPDDRDDVMLKLHELITPL-----------------------QLRRDDDGKLDSLEEIFHPNQVKPS   59 (340)
Q Consensus         4 ~~G~fg~V~~~~-~~~~~~~vAiK~~~~~~~~-----------------------~~~~~~~~E~~~l~~l~hpnIv~l~   59 (340)
                      ..|+||.||+|+ +..+|+.||+|+++.....                       .....+.+|+++++++.+. ++...
T Consensus        37 g~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~-~i~~p  115 (237)
T smart00090       37 STGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEA-GVPVP  115 (237)
T ss_pred             ccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhc-CCCCC
Confidence            478999999999 6778999999998753210                       0113357899999999763 23322


Q ss_pred             ccccccccccCCcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCc-eecCCCCCCcE
Q 019481           60 GYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQ-VIYRDFKAPNI  138 (340)
Q Consensus        60 ~~f~~~~~~~~~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~-iiHrDlKp~NI  138 (340)
                      ..+..      .  ..+++|||++|++|.........     +....+..++.||+.+|++||+  .+ |+||||||+||
T Consensus       116 ~~~~~------~--~~~lV~E~~~g~~L~~~~~~~~~-----~~~~~~~~i~~qi~~~l~~LH~--~g~iiH~Dikp~NI  180 (237)
T smart00090      116 KPIAW------R--RNVLVMEFIGGDGLPAPRLKDVE-----PEEEEEFELYDDILEEMRKLYK--EGELVHGDLSEYNI  180 (237)
T ss_pred             eeeEe------c--CceEEEEEecCCcccccccccCC-----cchHHHHHHHHHHHHHHHHHHh--cCCEEeCCCChhhE
Confidence            22211      1  23699999999888776543333     6677788999999999999999  99 99999999999


Q ss_pred             EecCCCceEEeccccceeecc
Q 019481          139 LLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus       139 Ll~~~~~~kl~DFGla~~~~~  159 (340)
                      +++ +++++|+|||.|.....
T Consensus       181 li~-~~~i~LiDFg~a~~~~~  200 (237)
T smart00090      181 LVH-DGKVVIIDVSQSVELDH  200 (237)
T ss_pred             EEE-CCCEEEEEChhhhccCC
Confidence            999 88999999999875433

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.85  E-value=7.8e-21  Score=155.90  Aligned_cols=126  Identities=13%  Similarity=0.019  Sum_probs=98.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhH-----HHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLR-----RDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~-----~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      +|+||+|+.+..  .+.+++.+.+..  .....     ..+.+|+++|++|. |++|.+++++.           ..+++
T Consensus        12 ~~~f~~v~~~~~--~~~k~~~~~l~~--~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~-----------~~~lv   76 (218)
T PRK12274         12 SDTFGRILLVRG--GERKFVRRDLSA--APWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD-----------GRHLD   76 (218)
T ss_pred             CCCcceEEEeec--CCceeeeccccc--chhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc-----------CEEEE
Confidence            689999997765  567788777753  22222     25789999999996 57888888741           45799


Q ss_pred             eccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCC-CCCcEEecCCCceEEeccccceee
Q 019481           79 KWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDF-KAPNILLDETFKCNLSDFSTAKVS  157 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDl-Kp~NILl~~~~~~kl~DFGla~~~  157 (340)
                      |||+.|.+|.+.+..           . ...++.|++++|+++|+  +||+|||| ||+|||++.++.++|+|||+|...
T Consensus        77 meyI~G~~L~~~~~~-----------~-~~~~~~qi~~~L~~lH~--~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~  142 (218)
T PRK12274         77 RSYLAGAAMYQRPPR-----------G-DLAYFRAARRLLQQLHR--CGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRG  142 (218)
T ss_pred             EeeecCccHHhhhhh-----------h-hHHHHHHHHHHHHHHHH--CcCccCCCCCcceEEEcCCCCEEEEECCCceec
Confidence            999999898754321           1 13578899999999999  88999999 799999999999999999999855


Q ss_pred             cc
Q 019481          158 AV  159 (340)
Q Consensus       158 ~~  159 (340)
                      ..
T Consensus       143 ~~  144 (218)
T PRK12274        143 NP  144 (218)
T ss_pred             CC
Confidence            43

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.84  E-value=1.4e-20  Score=168.93  Aligned_cols=189  Identities=18%  Similarity=0.157  Sum_probs=135.2

Q ss_pred             CCcceEEEEEEcCCCC-ceEEEEEeeccCchhhHHHHHHHHHHhhhcCC----CccccccccccccccccCCcceeeeee
Q 019481            5 APSFSVLIHVPFPDDR-DDVMLKLHELITPLQLRRDDDGKLDSLEEIFH----PNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~-~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~h----pnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      +|+||.||+|.+..++ +.+|+|+.......... .+..|+.++..+..    +++.++++.+.      ....+.++||
T Consensus        28 ~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~------~~~~~~~iVM  100 (322)
T KOG1164|consen   28 EGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS-VLKIEIQVLKKLEKKNGPSHFPKLLDHGR------STEDFNFIVM  100 (322)
T ss_pred             ccCCceEEEEEecCCCCeeEEEEEEEecccCCCc-cchhHHHHHHHHhhhcCCCCCCEEEEecc------CCCceeEEEE
Confidence            6899999999987774 67999998753322222 67889999999873    57888887442      3555888999


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCC-----CceEEeccccc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDET-----FKCNLSDFSTA  154 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~-----~~~kl~DFGla  154 (340)
                      +.+ |.||.++......   ..++..++..++.|++.+|++||+  .|++||||||+|+++...     ..+.|.|||+|
T Consensus       101 ~l~-G~sL~dl~~~~~~---~~fs~~T~l~ia~q~l~~l~~lH~--~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla  174 (322)
T KOG1164|consen  101 SLL-GPSLEDLRKRNPP---GRFSRKTVLRIAIQNLNALEDLHS--KGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA  174 (322)
T ss_pred             ecc-CccHHHHHHhCCC---CCcCHhHHHHHHHHHHHHHHHHHh--cCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence            988 7899998876652   459999999999999999999999  779999999999999865     46999999999


Q ss_pred             e--eecccC--------C-cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCC
Q 019481          155 K--VSAVEN--------A-DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWP  206 (340)
Q Consensus       155 ~--~~~~~~--------~-~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~  206 (340)
                      +  ......        . ...+.||..|.++..-.+.+.- ..|++|..+...++.....+|.
T Consensus       175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~  238 (322)
T KOG1164|consen  175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWE  238 (322)
T ss_pred             ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCc
Confidence            8  322111        1 1234588888887533333322 2244443333333333334453

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.83  E-value=3e-20  Score=155.68  Aligned_cols=136  Identities=9%  Similarity=0.066  Sum_probs=103.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc--hhhHHH------HHHHHHHhhhcCCCccccccccccccccc-cCCccee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP--LQLRRD------DDGKLDSLEEIFHPNQVKPSGYWSMNICL-TGDRRYC   75 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~------~~~E~~~l~~l~hpnIv~l~~~f~~~~~~-~~~~~~~   75 (340)
                      .|+||.||++..  ++..+|+|++.....  ....+.      +.+|++.+.++.||+|....++|.....- ..-....
T Consensus        41 ~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~  118 (232)
T PRK10359         41 NIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTY  118 (232)
T ss_pred             CCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccccccCCe
Confidence            789999999755  356799999975322  122222      67999999999999999999976532110 0112346


Q ss_pred             eeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccce
Q 019481           76 WKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK  155 (340)
Q Consensus        76 ~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~  155 (340)
                      +++|||++|.+|.+...         +++.    ...+++.+|..+|+  .+++|||+||+||+++.+| ++|+|||..+
T Consensus       119 ~lvmEyi~G~tL~~~~~---------~~~~----~~~~i~~~l~~lH~--~gi~H~Dikp~Nili~~~g-i~liDfg~~~  182 (232)
T PRK10359        119 IMLIEYIEGVELNDMPE---------ISED----VKAKIKASIESLHQ--HGMVSGDPHKGNFIVSKNG-LRIIDLSGKR  182 (232)
T ss_pred             EEEEEEECCccHHHhhh---------ccHH----HHHHHHHHHHHHHH--cCCccCCCChHHEEEeCCC-EEEEECCCcc
Confidence            78999999999988732         3432    45699999999999  8899999999999999988 9999999887


Q ss_pred             eec
Q 019481          156 VSA  158 (340)
Q Consensus       156 ~~~  158 (340)
                      ...
T Consensus       183 ~~~  185 (232)
T PRK10359        183 CTA  185 (232)
T ss_pred             ccc
Confidence            653

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.79  E-value=1.1e-18  Score=147.44  Aligned_cols=132  Identities=17%  Similarity=0.121  Sum_probs=105.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc-------hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP-------LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCW   76 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-------~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~   76 (340)
                      ..|++|.||+|..  .+..+++|.......       ......+.+|++++..+.|++|.....++.       +....+
T Consensus         5 ~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~-------~~~~~~   75 (211)
T PRK14879          5 KRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFV-------DPENFI   75 (211)
T ss_pred             ccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEE-------eCCCCE
Confidence            5799999999987  566788897653111       112345788999999999999877666443       223567


Q ss_pred             eeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481           77 KNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus        77 ~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      ++|||++|++|.+.+...        .+ ....++.+++.+|.++|+  .+++|||++|.|||++ ++.++|+|||+++.
T Consensus        76 lv~e~~~G~~L~~~~~~~--------~~-~~~~i~~~i~~~l~~lH~--~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         76 IVMEYIEGEPLKDLINSN--------GM-EELELSREIGRLVGKLHS--AGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             EEEEEeCCcCHHHHHHhc--------cH-HHHHHHHHHHHHHHHHHh--CCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            899999999999998642        22 788999999999999999  7799999999999999 88999999999875

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.79  E-value=1.2e-18  Score=145.53  Aligned_cols=131  Identities=18%  Similarity=0.154  Sum_probs=100.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCch---------------------hhHHHHHHHHHHhhhcCCCc--cccccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPL---------------------QLRRDDDGKLDSLEEIFHPN--QVKPSG   60 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~---------------------~~~~~~~~E~~~l~~l~hpn--Iv~l~~   60 (340)
                      +.|+||.||+|... +++.||+|+++.....                     .......+|+.++..+.|++  +.+.++
T Consensus        24 ~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~~~~  102 (198)
T cd05144          24 GVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPKPID  102 (198)
T ss_pred             ccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCceee
Confidence            47999999999875 7899999997642100                     01123678999999998874  333333


Q ss_pred             cccccccccCCcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEe
Q 019481           61 YWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILL  140 (340)
Q Consensus        61 ~f~~~~~~~~~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl  140 (340)
                                . ...+++|||++|++|.+....           .....++.++++++.++|+  .+|+||||||+||++
T Consensus       103 ----------~-~~~~lv~e~~~g~~L~~~~~~-----------~~~~~~~~~i~~~l~~lh~--~gi~H~Dl~p~Nill  158 (198)
T cd05144         103 ----------W-NRHAVVMEYIDGVELYRVRVL-----------EDPEEVLDEILEEIVKAYK--HGIIHGDLSEFNILV  158 (198)
T ss_pred             ----------c-CCceEEEEEeCCcchhhcccc-----------ccHHHHHHHHHHHHHHHHH--CCCCcCCCCcccEEE
Confidence                      1 133689999999998765331           2356788999999999999  789999999999999


Q ss_pred             cCCCceEEeccccceeecc
Q 019481          141 DETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus       141 ~~~~~~kl~DFGla~~~~~  159 (340)
                      +.++.++|+|||++.....
T Consensus       159 ~~~~~~~liDfg~~~~~~~  177 (198)
T cd05144         159 DDDEKIYIIDWPQMVSTDH  177 (198)
T ss_pred             cCCCcEEEEECCccccCCC
Confidence            9999999999999965543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.78  E-value=7.3e-20  Score=158.75  Aligned_cols=149  Identities=14%  Similarity=0.106  Sum_probs=117.9

Q ss_pred             CCcceEEEEEEcCC-----CCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            5 APSFSVLIHVPFPD-----DRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         5 ~G~fg~V~~~~~~~-----~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      .|.||+||+|..++     +.+.|-+|.++...+.-....++.|...+..+.|||+....+.     ++ ++...-++..
T Consensus       294 EGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V-----~i-e~~~~P~V~y  367 (563)
T KOG1024|consen  294 EGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV-----SI-EDYATPFVLY  367 (563)
T ss_pred             cCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE-----Ee-eccCcceEEE
Confidence            58999999996543     3455677887766666666778999999999999999999882     22 2333445556


Q ss_pred             ccccCCCHHHHhcccCCC---ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481           80 WLMQKKGLENVHIGEHPA---SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~---~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      .++.-|+|..++......   ..+.++..+....+.|++.|++|||+  .+|||.||...|++||+.-++||+|=.++|.
T Consensus       368 ~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~--~~ViHkDiAaRNCvIdd~LqVkltDsaLSRD  445 (563)
T KOG1024|consen  368 PATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN--HGVIHKDIAARNCVIDDQLQVKLTDSALSRD  445 (563)
T ss_pred             eccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh--cCcccchhhhhcceehhheeEEeccchhccc
Confidence            777789999999833221   12447788889999999999999999  7799999999999999999999999999997


Q ss_pred             ecccC
Q 019481          157 SAVEN  161 (340)
Q Consensus       157 ~~~~~  161 (340)
                      +-+.+
T Consensus       446 LFP~D  450 (563)
T KOG1024|consen  446 LFPGD  450 (563)
T ss_pred             cCccc
Confidence            76543

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.78  E-value=1.7e-18  Score=154.91  Aligned_cols=179  Identities=23%  Similarity=0.187  Sum_probs=142.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchh--hHHHHHHHHHHhhhcCCC-ccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQ--LRRDDDGKLDSLEEIFHP-NQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~~E~~~l~~l~hp-nIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||++.+.   ..+|+|.+.......  ....+.+|+.+++.+.|+ +|+++.+.|..       ....++++++
T Consensus        10 ~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-------~~~~~~~~~~   79 (384)
T COG0515          10 EGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQD-------EGSLYLVMEY   79 (384)
T ss_pred             CCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEec-------CCEEEEEEec
Confidence            6889999999987   779999998643333  467799999999999988 79999997732       2236799999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC-ceEEeccccceeeccc
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF-KCNLSDFSTAKVSAVE  160 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~-~~kl~DFGla~~~~~~  160 (340)
                      +.++++.+++......  ..+++.....++.|++.++.|+|+  .+++|||+||+||+++..+ .++++|||.++.....
T Consensus        80 ~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~H~--~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~  155 (384)
T COG0515          80 VDGGSLEDLLKKIGRK--GPLSESEALFILAQILSALEYLHS--KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP  155 (384)
T ss_pred             CCCCcHHHHHHhcccc--cCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence            9999999888776410  138999999999999999999999  7799999999999999988 7999999999866554


Q ss_pred             C-------CcceeeccceeeccCcccc----chhhhhHhHhCCccccc
Q 019481          161 N-------ADLTALDTSSVSAQSGKTG----MEMKMAQLESGGWRAHD  197 (340)
Q Consensus       161 ~-------~~~~~~gt~~~~~p~~~~~----~~~~~~~~~s~g~~~~~  197 (340)
                      .       ......||..|++|+...+    ......|+|+.|...+.
T Consensus       156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~  203 (384)
T COG0515         156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYE  203 (384)
T ss_pred             CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHH
Confidence            3       2356789999999987765    23334577765644443

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.78  E-value=1.5e-18  Score=145.15  Aligned_cols=130  Identities=17%  Similarity=0.099  Sum_probs=100.4

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC--c-----hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT--P-----LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCW   76 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~-----~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~   76 (340)
                      ..|+||.||+|..  ++..+++|......  .     ....+++.+|+++++.++|+++.....++.       +....+
T Consensus         3 g~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~-------~~~~~~   73 (199)
T TIGR03724         3 AKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDV-------DPDNKT   73 (199)
T ss_pred             CCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE-------ECCCCE
Confidence            5789999999984  45778888854311  1     112356788999999999887654443221       222456


Q ss_pred             eeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481           77 KNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus        77 ~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      ++|||++|++|.+.+....      .      .++.|++.+|.+||+  .+++|||+||+||+++ ++.++++|||+++.
T Consensus        74 lv~e~~~g~~l~~~~~~~~------~------~~~~~i~~~l~~lH~--~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        74 IVMEYIEGKPLKDVIEEGN------D------ELLREIGRLVGKLHK--AGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             EEEEEECCccHHHHHhhcH------H------HHHHHHHHHHHHHHH--CCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            8999999999998875421      1      789999999999999  7899999999999999 89999999999875


Q ss_pred             e
Q 019481          157 S  157 (340)
Q Consensus       157 ~  157 (340)
                      .
T Consensus       139 ~  139 (199)
T TIGR03724       139 S  139 (199)
T ss_pred             C
Confidence            3

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.77  E-value=1.6e-19  Score=147.88  Aligned_cols=155  Identities=15%  Similarity=0.015  Sum_probs=99.9

Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCcc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADL  164 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~  164 (340)
                      |||.++++.++.    .+++..++.++.||++||+|||+  ++      ||+|||++.++.+|+  ||+++......   
T Consensus         1 GsL~~~l~~~~~----~l~~~~~~~i~~qi~~~L~~lH~--~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~---   63 (176)
T smart00750        1 VSLADILEVRGR----PLNEEEIWAVCLQCLRALRELHR--QA------KSGNILLTWDGLLKL--DGSVAFKTPEQ---   63 (176)
T ss_pred             CcHHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHh--cC------CcccEeEcCccceee--ccceEeecccc---
Confidence            699999987543    39999999999999999999999  77      999999999999999  99998765432   


Q ss_pred             eeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHH-HHHHhhhhc
Q 019481          165 TALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLL-LIATLLSTI  242 (340)
Q Consensus       165 ~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~  242 (340)
                       ..||+.|+|||...+..+. ..|+|+.|...+.+.++.                     .||....... .........
T Consensus        64 -~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~---------------------~p~~~~~~~~~~~~~~~~~~  121 (176)
T smart00750       64 -SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYE---------------------LPYNEERELSAILEILLNGM  121 (176)
T ss_pred             -CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCC---------------------CCccccchhcHHHHHHHHHh
Confidence             2578889999644332221 235555554444443333                     2221110000 000000000


Q ss_pred             ccc------ccCcC-----CccccccccccCCCCchHHHHhhcCcce
Q 019481          243 TFL------SALKI-----TGCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       243 ~~~------~~~~~-----p~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ...      .....     -..+...|++.||.+||++.++++|+|.
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~  168 (176)
T smart00750      122 PADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRA  168 (176)
T ss_pred             ccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence            000      00000     1233447899999999999999999998

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.76  E-value=4e-18  Score=163.16  Aligned_cols=132  Identities=16%  Similarity=0.079  Sum_probs=99.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc-----hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP-----LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-----~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      ..|+||.||+|.+......+.++..+....     ....+.+.+|++++++++|++|+....++.       +....+++
T Consensus       342 G~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~-------~~~~~~lv  414 (535)
T PRK09605        342 GKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDV-------DPEEKTIV  414 (535)
T ss_pred             ccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEE-------eCCCCEEE
Confidence            378999999998755443222222221111     122356889999999999999987665432       22245689


Q ss_pred             eccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec
Q 019481           79 KWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      |||++|++|.+++.             ....++.|++++|.|||+  .+++||||||+|||+ .++.++|+|||+|+...
T Consensus       415 ~E~~~g~~L~~~l~-------------~~~~~~~~i~~~L~~lH~--~giiHrDlkp~NILl-~~~~~~liDFGla~~~~  478 (535)
T PRK09605        415 MEYIGGKDLKDVLE-------------GNPELVRKVGEIVAKLHK--AGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYSD  478 (535)
T ss_pred             EEecCCCcHHHHHH-------------HHHHHHHHHHHHHHHHHh--CCCccCCCChHHEEE-ECCcEEEEeCcccccCC
Confidence            99999999998875             246789999999999999  779999999999999 67899999999997643

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.76  E-value=7.8e-18  Score=144.19  Aligned_cols=138  Identities=20%  Similarity=0.112  Sum_probs=102.9

Q ss_pred             CCCCcceEEEEEEcCCCCceEEEEEeeccC------------chhhHHHHHHHHHHhhhcCCCcc--ccccccccccccc
Q 019481            3 GSAPSFSVLIHVPFPDDRDDVMLKLHELIT------------PLQLRRDDDGKLDSLEEIFHPNQ--VKPSGYWSMNICL   68 (340)
Q Consensus         3 ~~~G~fg~V~~~~~~~~~~~vAiK~~~~~~------------~~~~~~~~~~E~~~l~~l~hpnI--v~l~~~f~~~~~~   68 (340)
                      |..||.|+||.+...  +..+++|.+....            .......+.+|++++.+++|++|  ++.+++...... 
T Consensus        40 g~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~-  116 (239)
T PRK01723         40 GSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHG-  116 (239)
T ss_pred             ecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecC-
Confidence            457899999999864  6679999886311            01223567889999999998875  566654322111 


Q ss_pred             cCCcceeeeeeccccC-CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceE
Q 019481           69 TGDRRYCWKNKWLMQK-KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCN  147 (340)
Q Consensus        69 ~~~~~~~~~~~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~k  147 (340)
                        .....++++|+++| .+|.+++... .     +++..    +.||+.+|.+||+  .||+||||||+|||++.++.++
T Consensus       117 --~~~~~~lV~e~l~G~~~L~~~l~~~-~-----l~~~~----~~~i~~~l~~lH~--~GI~HrDlkp~NILv~~~~~v~  182 (239)
T PRK01723        117 --LFYRADILIERIEGARDLVALLQEA-P-----LSEEQ----WQAIGQLIARFHD--AGVYHADLNAHNILLDPDGKFW  182 (239)
T ss_pred             --cceeeeEEEEecCCCCCHHHHHhcC-C-----CCHHH----HHHHHHHHHHHHH--CCCCCCCCCchhEEEcCCCCEE
Confidence              01123489999997 6899988653 2     55543    5789999999999  7799999999999999999999


Q ss_pred             Eeccccceee
Q 019481          148 LSDFSTAKVS  157 (340)
Q Consensus       148 l~DFGla~~~  157 (340)
                      |+|||.++..
T Consensus       183 LIDfg~~~~~  192 (239)
T PRK01723        183 LIDFDRGELR  192 (239)
T ss_pred             EEECCCcccC
Confidence            9999998653

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.76  E-value=3.7e-20  Score=169.87  Aligned_cols=157  Identities=18%  Similarity=0.109  Sum_probs=129.3

Q ss_pred             CCcceEEEEEEc---CCCCceEEEEEeeccCc-hhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeee
Q 019481            5 APSFSVLIHVPF---PDDRDDVMLKLHELITP-LQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         5 ~G~fg~V~~~~~---~~~~~~vAiK~~~~~~~-~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      -|+||.|+++.-   ...+..+|+|+.++... .........|-.++..++ ||.+|+++..|++++       ..+++.
T Consensus         4 ~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~-------kl~l~l   76 (612)
T KOG0603|consen    4 QGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDG-------KLYLIL   76 (612)
T ss_pred             cCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecccc-------chhHhh
Confidence            478888876643   44677899999886222 122225567888999997 999999999887554       566889


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      ++..||+|...+.+...     +++.....+...++-+++++|+  .+|+|||+|++||+++.+|++|+.|||+++..-+
T Consensus        77 d~~rgg~lft~l~~~~~-----f~~~~~~~~~aelaLald~lh~--l~iiyrd~k~enilld~~Ghi~~tdfglske~v~  149 (612)
T KOG0603|consen   77 DFLRGGDLFTRLSKEVM-----FDELDVAFYLAELALALDHLHK--LGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVK  149 (612)
T ss_pred             hhcccchhhhccccCCc-----hHHHHHHHHHHHHHHHHhhcch--hHHHHhcccccceeecccCccccCCchhhhHhHh
Confidence            99999999999998877     8999999999999999999999  8899999999999999999999999999987655


Q ss_pred             cCCcceeeccceeeccCcc
Q 019481          160 ENADLTALDTSSVSAQSGK  178 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~~~  178 (340)
                      ....   |||..||||+..
T Consensus       150 ~~~~---cgt~eymApEI~  165 (612)
T KOG0603|consen  150 EKIA---CGTYEYRAPEII  165 (612)
T ss_pred             hhhc---ccchhhhhhHhh
Confidence            4433   999999999533

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.75  E-value=8e-18  Score=139.31  Aligned_cols=134  Identities=14%  Similarity=0.093  Sum_probs=93.9

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCch-hhHHH----------------------HHHHHHHhhhcCCCc--cccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPL-QLRRD----------------------DDGKLDSLEEIFHPN--QVKP   58 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~-~~~~~----------------------~~~E~~~l~~l~hpn--Iv~l   58 (340)
                      ++|+||+||+|.+. +++.||+|+++..... .....                      ...|.+.+.++.+.+  +.+.
T Consensus         6 g~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~   84 (187)
T cd05119           6 GTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVPKP   84 (187)
T ss_pred             ccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCCce
Confidence            57999999999987 7889999998752211 11111                      135566666665433  3333


Q ss_pred             cccccccccccCCcceeeeeeccccCCCHHH-HhcccCCCccccCCHHHHHHHHHHHHHHHHHhhc-CCCceecCCCCCC
Q 019481           59 SGYWSMNICLTGDRRYCWKNKWLMQKKGLEN-VHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHS-SEKQVIYRDFKAP  136 (340)
Q Consensus        59 ~~~f~~~~~~~~~~~~~~~~~e~~~~gsL~~-~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~~~iiHrDlKp~  136 (340)
                      ++..           ..++++||++++++.. .+....      .. ..+..++.+++.++.++|+ .+  |+||||||+
T Consensus        85 ~~~~-----------~~~lv~e~~~g~~~~~~~l~~~~------~~-~~~~~~~~~~~~~l~~lh~~~~--ivH~Dl~p~  144 (187)
T cd05119          85 IDLN-----------RHVLVMEFIGGDGIPAPRLKDVR------LL-EDPEELYDQILELMRKLYREAG--LVHGDLSEY  144 (187)
T ss_pred             EecC-----------CCEEEEEEeCCCCccChhhhhhh------hc-ccHHHHHHHHHHHHHHHhhccC--cCcCCCChh
Confidence            3311           2468999999865432 222111      11 5688899999999999998 66  999999999


Q ss_pred             cEEecCCCceEEeccccceeecc
Q 019481          137 NILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus       137 NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      ||+++ ++.++|+|||.|.....
T Consensus       145 Nili~-~~~~~liDfg~a~~~~~  166 (187)
T cd05119         145 NILVD-DGKVYIIDVPQAVEIDH  166 (187)
T ss_pred             hEEEE-CCcEEEEECcccccccC
Confidence            99999 99999999999976544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.72  E-value=6.6e-18  Score=147.14  Aligned_cols=192  Identities=18%  Similarity=0.156  Sum_probs=117.4

Q ss_pred             CCCccccccccccccccccC--------------------CcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHH
Q 019481           51 FHPNQVKPSGYWSMNICLTG--------------------DRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEI  110 (340)
Q Consensus        51 ~hpnIv~l~~~f~~~~~~~~--------------------~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  110 (340)
                      +|||||++.++|.+.....+                    .....|++|.-++. +|.+++-.+.      .+....+-+
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~------~s~r~~~~~  346 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH------RSYRTGRVI  346 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC------CchHHHHHH
Confidence            49999999999976643332                    33456788876654 8999998765      567788899


Q ss_pred             HHHHHHHHHHhhcCCCceecCCCCCCcEEec--CCC--ceEEeccccceeecc-------cCCcceeeccceeeccCccc
Q 019481          111 VTKMCQDLAFLHSSEKQVIYRDFKAPNILLD--ETF--KCNLSDFSTAKVSAV-------ENADLTALDTSSVSAQSGKT  179 (340)
Q Consensus       111 ~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~--~~~--~~kl~DFGla~~~~~-------~~~~~~~~gt~~~~~p~~~~  179 (340)
                      +.|+++|+.|||+  ++|.|||+|.+|||+.  .++  .+.|+|||++-.-+.       .......-|-...||||...
T Consensus       347 laQlLEav~hL~~--hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~t  424 (598)
T KOG4158|consen  347 LAQLLEAVTHLHK--HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIAT  424 (598)
T ss_pred             HHHHHHHHHHHHH--ccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhh
Confidence            9999999999999  8899999999999993  333  478999998743222       11111223444566664322


Q ss_pred             cchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhcccccc--CcCCccccc-
Q 019481          180 GMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTITFLSA--LKITGCKSE-  256 (340)
Q Consensus       180 ~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~-  256 (340)
                      +.+         |.....--...+.|.     .|.+.+|+.+...||-.--+     ..+...+|++.  |.+|+.+.+ 
T Consensus       425 a~P---------Gp~avvny~kAD~WA-----~GalaYEIfg~~NPFY~rGe-----m~L~~r~Yqe~qLPalp~~vpp~  485 (598)
T KOG4158|consen  425 AVP---------GPNAVVNYEKADTWA-----AGALAYEIFGRSNPFYKRGE-----MLLDTRTYQESQLPALPSRVPPV  485 (598)
T ss_pred             cCC---------CCceeeccchhhhhh-----hhhhHHHHhccCCcccccch-----heechhhhhhhhCCCCcccCChH
Confidence            110         111111111223355     55555555554444332111     12233335444  445544322 


Q ss_pred             ------cccccCCCCchHHH
Q 019481          257 ------EGYKNNSSLNPICQ  270 (340)
Q Consensus       257 ------~~l~~dP~~R~t~~  270 (340)
                            +.|++||++|++..
T Consensus       486 ~rqlV~~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  486 ARQLVFDLLKRDPSKRVSPN  505 (598)
T ss_pred             HHHHHHHHhcCCccccCCcc
Confidence                  56999999999954

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.66  E-value=6.5e-16  Score=122.83  Aligned_cols=129  Identities=17%  Similarity=0.147  Sum_probs=103.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCC--CccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFH--PNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~h--pnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|.++.||++....  ..+++|.......   ...+.+|+.+++.++|  .++.+++.++..       .+..++++||
T Consensus         7 ~~g~~~~v~~~~~~~--~~~~iK~~~~~~~---~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~-------~~~~~~v~e~   74 (155)
T cd05120           7 KGGLTNRVYLLGTKD--EDYVLKINPSREK---GADREREVAILQLLARKGLPVPKVLASGES-------DGWSYLLMEW   74 (155)
T ss_pred             ccccccceEEEEecC--CeEEEEecCCCCc---hhHHHHHHHHHHHHHHcCCCCCeEEEEcCC-------CCccEEEEEe
Confidence            468899999999754  6799999864332   4568899999999986  488888875542       2457789999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcC-CCceecCCCCCCcEEecCCCceEEecccccee
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSS-EKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~-~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      ++++++..+            +......++.+++++++++|.. ..+++|+|+||+||+++..+.++++|||.++.
T Consensus        75 ~~g~~~~~~------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          75 IEGETLDEV------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             cCCeecccC------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            998777644            3356677889999999999992 23699999999999999989999999999864

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.63  E-value=1.4e-16  Score=154.05  Aligned_cols=243  Identities=15%  Similarity=0.015  Sum_probs=149.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhH---HHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLR---RDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~---~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ++-|=.|.+|++.++-  |++|++-+.++.-..   ++...|++ ....+|||.+.+..+-+       .....|++-+|
T Consensus        33 stRFlKv~r~k~~eG~--vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~-------t~kAAylvRqy  102 (1431)
T KOG1240|consen   33 STRFLKVARAKDREGL--VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLV-------TDKAAYLVRQY  102 (1431)
T ss_pred             chhhhhhhhccCCCce--EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHH-------hhHHHHHHHHH
Confidence            4557778899886543  899998765433333   33444555 55568999998877432       33366777888


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee--ecc
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV--SAV  159 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~--~~~  159 (340)
                      ... +|+|.+..+.-     +...+-+-|+.|++.||..+|.  .+|+|+|||.||||+++=+-+.|+||..-+.  +.+
T Consensus       103 vkh-nLyDRlSTRPF-----L~~iEKkWiaFQLL~al~qcH~--~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe  174 (1431)
T KOG1240|consen  103 VKH-NLYDRLSTRPF-----LVLIEKKWIAFQLLKALSQCHK--LGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPE  174 (1431)
T ss_pred             Hhh-hhhhhhccchH-----HHHHHHHHHHHHHHHHHHHHHH--cCccccccccceEEEeeechhhhhcccccCCccCCC
Confidence            854 99999998876     8888889999999999999999  7799999999999999988999999986542  222


Q ss_pred             cCCc--ceeecc----ceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccC-CchhHHHHHHH
Q 019481          160 ENAD--LTALDT----SSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKT-ENETWNNFLYL  232 (340)
Q Consensus       160 ~~~~--~~~~gt----~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~  232 (340)
                      +++.  .-+..|    ..|.|||.+.+.+-.    .+++.+........+.++     .||+..|+.. |.++|. +.+.
T Consensus       175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~----~~~~q~~~~L~paMDIFS-----~GCViaELf~Eg~PlF~-LSQL  244 (1431)
T KOG1240|consen  175 DNPADFTFFFDTSRRRTCYIAPERFVSALGK----TSVGQDAPLLTPAMDIFS-----AGCVIAELFLEGRPLFT-LSQL  244 (1431)
T ss_pred             CCcccceEEEecCCceeeecChHhhhccccc----cccCCcccccChhhhhhh-----hhHHHHHHHhcCCCccc-HHHH
Confidence            3222  122333    348888766553311    111222221222333344     6666666554 344332 1111


Q ss_pred             HHHHHhhhhccccccCcCC----ccccccccccCCCCchHHHHhhcC
Q 019481          233 LLIATLLSTITFLSALKIT----GCKSEEGYKNNSSLNPICQIVNQH  275 (340)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~p----~~~~~~~l~~dP~~R~t~~~ll~h  275 (340)
                      ......-....-+--..++    ..+...++++||++|.+|++.|+.
T Consensus       245 ~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  245 LAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             HhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence            1100000000000001111    122335689999999999988765

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.61  E-value=1.3e-16  Score=152.77  Aligned_cols=245  Identities=16%  Similarity=0.102  Sum_probs=171.3

Q ss_pred             CCcceEEEEEEcC-CCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFP-DDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~-~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+|+.|-.+... .+...+|.|.+.... .....+....|..+-+.+. |+|++++++       ...+..++++..++
T Consensus        30 ~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~-------~~~~~~~~~~~~~~  102 (601)
T KOG0590|consen   30 KGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIE-------PSSSPRSYLLSLSY  102 (601)
T ss_pred             ccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCC-------ccCCCcccccccCc
Confidence            8899999888774 345567777776532 2333455566888888887 999999999       44566688899999


Q ss_pred             ccCCCHHHHh-cccCCCccccCCHHHHHHHHHHHHHHHHHhh-cCCCceecCCCCCCcEEecCCC-ceEEeccccceeec
Q 019481           82 MQKKGLENVH-IGEHPASVRQLRRAERLEIVTKMCQDLAFLH-SSEKQVIYRDFKAPNILLDETF-KCNLSDFSTAKVSA  158 (340)
Q Consensus        82 ~~~gsL~~~l-~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH-~~~~~iiHrDlKp~NILl~~~~-~~kl~DFGla~~~~  158 (340)
                      ..||++++.+ .....    ..+...+..++.|+..++.|+| .  .++.|||+||+|.+++..+ .+|++|||+|..+.
T Consensus       103 s~g~~~f~~i~~~~~~----~~~~~~~~~~~~ql~s~l~~~H~~--~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~  176 (601)
T KOG0590|consen  103 SDGGSLFSKISHPDST----GTSSSSASRYLPQLNSGLSYLHPE--NGVTHRDIKPSNSLLDESGSALKIADFGLATAYR  176 (601)
T ss_pred             ccccccccccccCCcc----CCCCcchhhhhhhhccCccccCcc--cccccCCCCCccchhccCCCcccCCCchhhcccc
Confidence            9999999999 44431    3788889999999999999999 8  7799999999999999999 99999999998776


Q ss_pred             c-cCC---cceeec-cceeeccCccccchhh--hhHhHhCCccccccccccccCCCCCCcccccCCCccC----CchhHH
Q 019481          159 V-ENA---DLTALD-TSSVSAQSGKTGMEMK--MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKT----ENETWN  227 (340)
Q Consensus       159 ~-~~~---~~~~~g-t~~~~~p~~~~~~~~~--~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~  227 (340)
                      . ...   ....+| ++.|++|+...+.++.  ..++|+.|.....+..+.-+|-+.....+.....+..    ...+|.
T Consensus       177 ~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (601)
T KOG0590|consen  177 NKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWN  256 (601)
T ss_pred             ccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCccc
Confidence            6 222   234578 9999999877775433  2255665666555555554554333322211111100    111222


Q ss_pred             HHHHHHHHHHhhhhccccccCcCCccccccccccCCCCchHHHHhhcCcceee
Q 019481          228 NFLYLLLIATLLSTITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                      .....                  +.++..+.+..+|++|.+.+++..+||+..
T Consensus       257 ~~~~~------------------~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  257 SISDQ------------------AHDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             cCChh------------------hhhcccccccCCchhccccccccccccccc
Confidence            21111                  122334667789999999999999999933

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.60  E-value=2.6e-15  Score=147.27  Aligned_cols=135  Identities=16%  Similarity=0.086  Sum_probs=100.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC---CCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF---HPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      -|+||.||+|...+ ++.||+|+-+....  +  +|--=.+++.+|+   -+.|..+...+     +  -.+.+++++||
T Consensus       708 ~g~y~~vy~a~~~~-~~~~alK~e~P~~~--W--EfYI~~q~~~RLk~~~~~~~~~~~~a~-----~--~~~~S~lv~ey  775 (974)
T KOG1166|consen  708 EGSYGSVYVATHSN-GKLVALKVEKPPNP--W--EFYICLQVMERLKPQMLPSIMHISSAH-----V--FQNASVLVSEY  775 (974)
T ss_pred             cccceEEEEeecCC-CcEEEEEeecCCCc--e--eeeehHHHHHhhchhhhcchHHHHHHH-----c--cCCcceeeeec
Confidence            58999999999987 99999999864221  1  0111133344444   23344444322     2  22357799999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC-------CCceEEeccccc
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE-------TFKCNLSDFSTA  154 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~-------~~~~kl~DFGla  154 (340)
                      .+.|+|.+++...+.     ++|..+..+..|++.-+++||.  .+|||+||||+|.||..       +.-++|+|||.|
T Consensus       776 ~~~Gtlld~~N~~~~-----m~e~lv~~~~~qml~ive~lH~--~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~s  848 (974)
T KOG1166|consen  776 SPYGTLLDLINTNKV-----MDEYLVMFFSCQMLRIVEHLHA--MGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRS  848 (974)
T ss_pred             cccccHHHhhccCCC-----CCchhhhHHHHHHHHHHHHHHh--cceecccCCcceeEeecccCCCCcccceEEEecccc
Confidence            999999999995554     9999999999999999999999  55999999999999942       345999999998


Q ss_pred             eeec
Q 019481          155 KVSA  158 (340)
Q Consensus       155 ~~~~  158 (340)
                      -.+.
T Consensus       849 iDm~  852 (974)
T KOG1166|consen  849 IDMK  852 (974)
T ss_pred             eeee
Confidence            6543

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.59  E-value=2.8e-15  Score=140.93  Aligned_cols=145  Identities=13%  Similarity=0.060  Sum_probs=94.4

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCch---------------------------------hhHHHHHHHHHHhhhc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPL---------------------------------QLRRDDDGKLDSLEEI   50 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~---------------------------------~~~~~~~~E~~~l~~l   50 (340)
                      .+|++|.||+|+.+.+|+.||+|+.+.....                                 +..+.+.+|++..+..
T Consensus       128 asaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea  207 (537)
T PRK04750        128 ASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREA  207 (537)
T ss_pred             cCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHH
Confidence            4799999999999888999999999742110                                 1112233444444443


Q ss_pred             CCCcccccccccccccccc------CCcceeeeeeccccCCCHHHH--hcccCCCccccCCHHHHHHHHHHHHHHHHHhh
Q 019481           51 FHPNQVKPSGYWSMNICLT------GDRRYCWKNKWLMQKKGLENV--HIGEHPASVRQLRRAERLEIVTKMCQDLAFLH  122 (340)
Q Consensus        51 ~hpnIv~l~~~f~~~~~~~------~~~~~~~~~~e~~~~gsL~~~--l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH  122 (340)
                        +|+.++...|.....+.      +-....+++|||++|+++.+.  +...+. ....+.+..+..++.|++       
T Consensus       208 --~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~-d~~~la~~~v~~~~~Qif-------  277 (537)
T PRK04750        208 --ANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGT-DMKLLAERGVEVFFTQVF-------  277 (537)
T ss_pred             --HHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCC-CHHHHHHHHHHHHHHHHH-------
Confidence              35555554443222111      001134599999999999875  332221 011255555666666665       


Q ss_pred             cCCCceecCCCCCCcEEecCCC----ceEEeccccceeeccc
Q 019481          123 SSEKQVIYRDFKAPNILLDETF----KCNLSDFSTAKVSAVE  160 (340)
Q Consensus       123 ~~~~~iiHrDlKp~NILl~~~~----~~kl~DFGla~~~~~~  160 (340)
                      .  .|++|+|+||.||+++.+|    ++++.|||++..+.+.
T Consensus       278 ~--~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~  317 (537)
T PRK04750        278 R--DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE  317 (537)
T ss_pred             h--CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence            4  6799999999999999888    9999999999887654

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.56  E-value=2.7e-14  Score=123.51  Aligned_cols=186  Identities=16%  Similarity=0.110  Sum_probs=103.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCC---C-------ccccccccccc---ccc--
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFH---P-------NQVKPSGYWSM---NIC--   67 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~h---p-------nIv~l~~~f~~---~~~--   67 (340)
                      .|+++.||.+++..|++.+|+|+.-...  .....+.+++|.-....+.+   |       .++--++.-..   ...  
T Consensus        22 ~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~~~~~~  101 (288)
T PF14531_consen   22 KGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGKPPFFE  101 (288)
T ss_dssp             EETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS-SEEE
T ss_pred             cCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCCCccee
Confidence            5789999999999999999999977522  22345666666644444222   1       11111111000   000  


Q ss_pred             ccCCcc-----eeeeeeccccCCCHHHHhcc---cCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEE
Q 019481           68 LTGDRR-----YCWKNKWLMQKKGLENVHIG---EHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNIL  139 (340)
Q Consensus        68 ~~~~~~-----~~~~~~e~~~~gsL~~~l~~---~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NIL  139 (340)
                      ...+..     ..++.++-+. +||.+++..   .... ...+.-.....+..|+++.+++||+  .|++|+||||+|++
T Consensus       102 ~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~-~~~l~~~arl~lT~Q~I~lvA~Lh~--~GlVHgdi~~~nfl  177 (288)
T PF14531_consen  102 RGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQT-HSPLAFAARLSLTVQMIRLVANLHS--YGLVHGDIKPENFL  177 (288)
T ss_dssp             ECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTT-SHHHHHHHHHHHHHHHHHHHHHHHH--TTEEEST-SGGGEE
T ss_pred             cCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccc-cchhHHHHHHHHHHHHHHHHHHHhh--cceEecccceeeEE
Confidence            000000     1234455553 588777542   2220 0123334456677999999999999  88999999999999


Q ss_pred             ecCCCceEEeccccceeecccCCcceeeccceeec-------------------cCccccchhhhhHhHhCCcccc
Q 019481          140 LDETFKCNLSDFSTAKVSAVENADLTALDTSSVSA-------------------QSGKTGMEMKMAQLESGGWRAH  196 (340)
Q Consensus       140 l~~~~~~kl~DFGla~~~~~~~~~~~~~gt~~~~~-------------------p~~~~~~~~~~~~~~s~g~~~~  196 (340)
                      ++.+|.++|+||+.....+.....  ...+..+.+                   ..|-|..|+..+.+||+..++.
T Consensus       178 l~~~G~v~Lg~F~~~~r~g~~~~~--~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~  251 (288)
T PF14531_consen  178 LDQDGGVFLGDFSSLVRAGTRYRC--SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFG  251 (288)
T ss_dssp             E-TTS-EEE--GGGEEETTEEEEG--GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STC
T ss_pred             EcCCCCEEEcChHHHeecCceeec--cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCC
Confidence            999999999999977654332110  011122222                   2356677777777787655543

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.56  E-value=2.7e-16  Score=151.83  Aligned_cols=135  Identities=19%  Similarity=0.195  Sum_probs=92.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      |.|+||.||.++++.+.+.+|+|+-+.   +-    +.|           ||..+-+             .-++|     
T Consensus        92 sngAygavylvrh~~trqrfa~kiNkq---~l----ilR-----------nilt~a~-------------npfvv-----  135 (1205)
T KOG0606|consen   92 SNGAYGAVYLVRHKETRQRFAMKINKQ---NL----ILR-----------NILTFAG-------------NPFVV-----  135 (1205)
T ss_pred             ccCCCCceeeeeccccccchhhccccc---ch----hhh-----------ccccccC-------------Cccee-----
Confidence            789999999999999999999965431   11    111           1333333             11222     


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC--
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN--  161 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--  161 (340)
                       ||-...++.-+.     ++..        ++.+++|||+  .+|+|||+||+|.+|+.-|++|++|||+++..-...  
T Consensus       136 -gDc~tllk~~g~-----lPvd--------mvla~Eylh~--ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at  199 (1205)
T KOG0606|consen  136 -GDCATLLKNIGP-----LPVD--------MVLAVEYLHS--YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT  199 (1205)
T ss_pred             -chhhhhcccCCC-----Ccch--------hhHHhHhhcc--CCeecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence             566666666554     4432        2778999999  889999999999999999999999999987532111  


Q ss_pred             --------------CcceeeccceeeccC-----------ccccchhhhhHhHh
Q 019481          162 --------------ADLTALDTSSVSAQS-----------GKTGMEMKMAQLES  190 (340)
Q Consensus       162 --------------~~~~~~gt~~~~~p~-----------~~~~~~~~~~~~~s  190 (340)
                                    .....|||+.|.||+           |||+.++++++.+-
T Consensus       200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLV  253 (1205)
T KOG0606|consen  200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLV  253 (1205)
T ss_pred             hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHhe
Confidence                          112348999999994           44555555555444

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.56  E-value=1.6e-14  Score=134.17  Aligned_cols=139  Identities=13%  Similarity=0.050  Sum_probs=92.4

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhh---------------------------------------HHHHHHHH
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQL---------------------------------------RRDDDGKL   44 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~---------------------------------------~~~~~~E~   44 (340)
                      .+|++|.||+|+.+ +|+.||||+.+.......                                       .-++.+|.
T Consensus       126 asaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea  204 (437)
T TIGR01982       126 AAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREA  204 (437)
T ss_pred             eeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHHH
Confidence            47899999999975 678999999864211100                                       01244455


Q ss_pred             HHhhhcC-----CCccccccccccccccccCCcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHH-HH
Q 019481           45 DSLEEIF-----HPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQ-DL  118 (340)
Q Consensus        45 ~~l~~l~-----hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~-~L  118 (340)
                      +.+.++.     +++| ..-..|..    .  ....+++|||++|++|.+.......    ..+   ...++.+++. .+
T Consensus       205 ~n~~~~~~~~~~~~~v-~vP~v~~~----~--~~~~vLvmE~i~G~~L~~~~~~~~~----~~~---~~~ia~~~~~~~l  270 (437)
T TIGR01982       205 ANASELGENFKNDPGV-YVPEVYWD----R--TSERVLTMEWIDGIPLSDIAALDEA----GLD---RKALAENLARSFL  270 (437)
T ss_pred             HHHHHHHHhcCCCCCE-EeCCEehh----h--cCCceEEEEeECCcccccHHHHHhc----CCC---HHHHHHHHHHHHH
Confidence            5555542     2332 22221110    0  1134699999999999887654321    122   3345555555 46


Q ss_pred             HHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481          119 AFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus       119 ~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      ..+|.  .|++|+|+||.||+++.+++++++|||++..+.+
T Consensus       271 ~ql~~--~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       271 NQVLR--DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             HHHHh--CCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence            78899  7799999999999999999999999999987754

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.55  E-value=6.5e-16  Score=131.79  Aligned_cols=103  Identities=17%  Similarity=0.253  Sum_probs=87.3

Q ss_pred             HHHhhhcCCCccccccccccccccccCCcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhc
Q 019481           44 LDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHS  123 (340)
Q Consensus        44 ~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~  123 (340)
                      .+.|-++.|.|||+++.||.+.  -+.+.....++.|||+.|+|.++|++..++ ...+......+|+.||++||.|||+
T Consensus       118 FdnllqlvHsnlvkfH~yw~d~--K~~e~~rviFiteymssgs~~~fLkrt~~~-~~a~~~~~wkkw~tqIlsal~yLhs  194 (458)
T KOG1266|consen  118 FDNLLQLVHSNLVKFHKYWTDK--KYEEKPRVIFITEYMSSGSLKQFLKRTKKN-QKALFQKAWKKWCTQILSALSYLHS  194 (458)
T ss_pred             HHHHHHHHHHHHHHHHHhhccc--ccccccceEEEEecccchhHHHHHHHHHHh-hhhhhHHHHHHHHHHHHhhhhhhhc
Confidence            4556677899999999999765  244555677888999999999999876542 3458888999999999999999999


Q ss_pred             CCCceecCCCCCCcEEecCCCceEEe
Q 019481          124 SEKQVIYRDFKAPNILLDETFKCNLS  149 (340)
Q Consensus       124 ~~~~iiHrDlKp~NILl~~~~~~kl~  149 (340)
                      |+.+|+|+++...-|++..+|-+||.
T Consensus       195 ~~PpiihgnlTc~tifiq~ngLIkig  220 (458)
T KOG1266|consen  195 CDPPIIHGNLTCDTIFIQHNGLIKIG  220 (458)
T ss_pred             cCCccccCCcchhheeecCCceEEec
Confidence            98999999999999999999999984

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.50  E-value=4.9e-15  Score=123.37  Aligned_cols=223  Identities=14%  Similarity=0.149  Sum_probs=146.1

Q ss_pred             cceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccCC
Q 019481            7 SFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKK   85 (340)
Q Consensus         7 ~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~g   85 (340)
                      ..|..|+|+.+.+.  ++.|+++.. ......++|..|.-.|+-..||||..+.+...       ..-...++..||+.|
T Consensus       202 hsgelwrgrwqgnd--ivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacn-------sppnlv~isq~mp~g  272 (448)
T KOG0195|consen  202 HSGELWRGRWQGND--IVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACN-------SPPNLVIISQYMPFG  272 (448)
T ss_pred             CCcccccccccCcc--hhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhcc-------CCCCceEeeeeccch
Confidence            35788999987554  667777642 23344567889999999999999999999543       334666888999999


Q ss_pred             CHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEe--ccccceeecccCCc
Q 019481           86 GLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLS--DFSTAKVSAVENAD  163 (340)
Q Consensus        86 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~--DFGla~~~~~~~~~  163 (340)
                      ||+..++....   ..++..++.+++.+|+.|++|||+.+.-|.---|....+++|++.+.+|.  |--++-+  ..   
T Consensus       273 slynvlhe~t~---vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfq--e~---  344 (448)
T KOG0195|consen  273 SLYNVLHEQTS---VVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ--EV---  344 (448)
T ss_pred             HHHHHHhcCcc---EEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeee--cc---
Confidence            99999998876   56888999999999999999999954335555688999999998776653  3222211  10   


Q ss_pred             ceeeccceeeccCcccc-ch---hhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          164 LTALDTSSVSAQSGKTG-ME---MKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~-~~---~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                       ...-.|.+|+|+...- |+   +...|+                |+     ..++..++.+.+.||.+...+.  |.  
T Consensus       345 -gr~y~pawmspealqrkped~n~raadm----------------ws-----faillwel~trevpfadlspme--cg--  398 (448)
T KOG0195|consen  345 -GRAYSPAWMSPEALQRKPEDLNIRAADM----------------WS-----FAILLWELNTREVPFADLSPME--CG--  398 (448)
T ss_pred             -ccccCcccCCHHHHhcCchhcchhhhhH----------------HH-----HHHHHHHhhccccccccCCchh--hh--
Confidence             0111455666643221 11   112233                44     3344555555555655544431  00  


Q ss_pred             hhcc-ccccCcCCccccc-------cccccCCCCchHHHHh
Q 019481          240 STIT-FLSALKITGCKSE-------EGYKNNSSLNPICQIV  272 (340)
Q Consensus       240 ~~~~-~~~~~~~p~~~~~-------~~l~~dP~~R~t~~~l  272 (340)
                      -++. -+..+.+|...+.       .|.+.||.+||..+++
T Consensus       399 mkialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmi  439 (448)
T KOG0195|consen  399 MKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMI  439 (448)
T ss_pred             hhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCccee
Confidence            0111 2334566665544       6799999999987765

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.48  E-value=1.4e-13  Score=111.85  Aligned_cols=124  Identities=15%  Similarity=0.050  Sum_probs=90.9

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccc-cccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQV-KPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv-~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ++|.++.||++...  ++.|++|+......  ....+.+|..+++.+.+.+++ +++.+..       +  ..+++||++
T Consensus         7 ~~G~~~~vy~~~~~--~~~~~lK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~P~~~~~~~-------~--~~~lv~e~i   73 (170)
T cd05151           7 KGGMTNKNYRVEVA--NKKYVVRIPGNGTE--LLINRENEAENSKLAAEAGIGPKLYYFDP-------E--TGVLITEFI   73 (170)
T ss_pred             CCcccCceEEEEEC--CeEEEEEeCCCCcc--cccCHHHHHHHHHHHHHhCCCCceEEEeC-------C--CCeEEEEec
Confidence            46788999999864  67899999864321  223467899999998765544 4444211       1  245899999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCc-----eecCCCCCCcEEecCCCceEEecccccee
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQ-----VIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~-----iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      +|.++.+.     .     .   ....++.+++++|+.||+  .+     ++|+|++|.||+++ ++.++++|||.+..
T Consensus        74 ~G~~l~~~-----~-----~---~~~~~~~~l~~~l~~LH~--~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151          74 EGSELLTE-----D-----F---SDPENLEKIAKLLKKLHS--SPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             CCCccccc-----c-----c---cCHHHHHHHHHHHHHHhC--CCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            99887643     1     1   113456789999999999  55     49999999999999 67899999999864

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.46  E-value=9.6e-13  Score=108.08  Aligned_cols=135  Identities=13%  Similarity=0.016  Sum_probs=95.2

Q ss_pred             CCCcceEEEEEEcCC------CCceEEEEEeeccC------------c---------hhhHHHHH----HHHHHhhhcCC
Q 019481            4 SAPSFSVLIHVPFPD------DRDDVMLKLHELIT------------P---------LQLRRDDD----GKLDSLEEIFH   52 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~------~~~~vAiK~~~~~~------------~---------~~~~~~~~----~E~~~l~~l~h   52 (340)
                      |.|.=+.||.|....      .+..+|+|+.+...            +         ....+.+.    +|.+.|+++..
T Consensus         6 ~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~rl~~   85 (197)
T cd05146           6 STGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKRMQK   85 (197)
T ss_pred             ccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            678889999998654      35789999988311            0         01122333    89999999853


Q ss_pred             --CccccccccccccccccCCcceeeeeeccccCCCHHH-HhcccCCCccccCCHHHHHHHHHHHHHHHHHh-hcCCCce
Q 019481           53 --PNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLEN-VHIGEHPASVRQLRRAERLEIVTKMCQDLAFL-HSSEKQV  128 (340)
Q Consensus        53 --pnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~gsL~~-~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yL-H~~~~~i  128 (340)
                        -++.+.+++.           .-+++|||+.+..+.. .+++ ..     +++.....+..|++.+|..+ |+  .++
T Consensus        86 ~Gv~vP~pi~~~-----------~~~lvME~Ig~~~~~~~~Lkd-~~-----~~~~~~~~i~~~i~~~l~~l~H~--~gl  146 (197)
T cd05146          86 AGIPCPEVVVLK-----------KHVLVMSFIGDDQVPAPKLKD-AK-----LNDEEMKNAYYQVLSMMKQLYKE--CNL  146 (197)
T ss_pred             cCCCCCeEEEec-----------CCEEEEEEcCCCCccchhhhc-cc-----cCHHHHHHHHHHHHHHHHHHHHh--CCe
Confidence              3444444421           3448999997644422 2332 12     56667778889999999999 89  669


Q ss_pred             ecCCCCCCcEEecCCCceEEeccccceeec
Q 019481          129 IYRDFKAPNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus       129 iHrDlKp~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      +|+||++.|||++ ++.+.|+|||.|....
T Consensus       147 VHGDLs~~NIL~~-~~~v~iIDF~qav~~~  175 (197)
T cd05146         147 VHADLSEYNMLWH-DGKVWFIDVSQSVEPT  175 (197)
T ss_pred             ecCCCCHHHEEEE-CCcEEEEECCCceeCC
Confidence            9999999999996 5789999999986553

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.43  E-value=2.2e-14  Score=131.79  Aligned_cols=99  Identities=21%  Similarity=0.218  Sum_probs=86.1

Q ss_pred             hhhcCCCccccccccccccccccCCcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCC
Q 019481           47 LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEK  126 (340)
Q Consensus        47 l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~  126 (340)
                      |+.+.|.|+.+++|...       +....+.+.+||+.|+|.|.+....-    .+++.....++++|+.||+|||+  -
T Consensus         1 l~~l~h~n~~~f~g~~~-------~~~~~~~i~~~c~rGsl~D~i~~~~~----~~d~~F~~s~~rdi~~Gl~ylh~--s   67 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASV-------DGPEMIVIWEYCSRGSLLDILSNEDI----KLDYFFILSFIRDISKGLAYLHN--S   67 (484)
T ss_pred             CcccchhhhhhheeeEe-------cCCceEEEEeeecCccHHhHHhcccc----CccHHHHHHHHHHHHHHHHHHhc--C
Confidence            56789999999999432       33566688899999999999998553    49999999999999999999999  4


Q ss_pred             ce-ecCCCCCCcEEecCCCceEEeccccceeec
Q 019481          127 QV-IYRDFKAPNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus       127 ~i-iHrDlKp~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      +| .|+.+++.|+++|....+||+|||+.....
T Consensus        68 ~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~  100 (484)
T KOG1023|consen   68 PIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLE  100 (484)
T ss_pred             cceeeeeeccccceeeeeEEEEechhhhccccc
Confidence            45 999999999999999999999999987664

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.34  E-value=2.3e-12  Score=118.75  Aligned_cols=177  Identities=17%  Similarity=0.154  Sum_probs=131.5

Q ss_pred             CCcceEEEEEEc--CCCCceEEEEEeec-cCchhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVPF--PDDRDDVMLKLHEL-ITPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~~--~~~~~~vAiK~~~~-~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|.+|.||.+..  ..+...+|+|.-+. .........-.+|+...++++ |+|.++.+..|+       +.+..++-+|
T Consensus       126 ~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e-------~~~~lfiqtE  198 (524)
T KOG0601|consen  126 PGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWE-------GSGILFIQTE  198 (524)
T ss_pred             CCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccc-------cCCcceeeec
Confidence            489999999998  88899999999553 222233344567888888885 999999887554       5556778888


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHH----HHHHhhcCCCceecCCCCCCcEEecCC-CceEEeccccce
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQ----DLAFLHSSEKQVIYRDFKAPNILLDET-FKCNLSDFSTAK  155 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~----~L~yLH~~~~~iiHrDlKp~NILl~~~-~~~kl~DFGla~  155 (340)
                      ++. .+|.++......    -++...++....+..+    ||.++|+  ++++|-|+||+||+...+ ...+++|||+..
T Consensus       199 ~~~-~sl~~~~~~~~~----~~p~~~l~~~~~~~~~~~~~al~~~hs--~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~  271 (524)
T KOG0601|consen  199 LCG-ESLQSYCHTPCN----FLPDNLLWNSLRDWLSRDVTALSHLHS--NNIVHDDLKPANIFTTSDWTSCKLTDFGLVS  271 (524)
T ss_pred             ccc-chhHHhhhcccc----cCCchhhhhHHhhhhhcccccccccCC--CcccccccchhheecccccceeecCCcceeE
Confidence            884 688888776654    3888899999999999    9999999  789999999999999999 889999999998


Q ss_pred             eecccCCcc-ee-----eccceeeccCccccchhhhhHhHhCCccc
Q 019481          156 VSAVENADL-TA-----LDTSSVSAQSGKTGMEMKMAQLESGGWRA  195 (340)
Q Consensus       156 ~~~~~~~~~-~~-----~gt~~~~~p~~~~~~~~~~~~~~s~g~~~  195 (340)
                      .+..+.-.. ..     .|...|++|+..-+.--...++.+.|..+
T Consensus       272 ~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~  317 (524)
T KOG0601|consen  272 KISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVI  317 (524)
T ss_pred             EccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhh
Confidence            887654221 11     45666888864444333344444433333

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.32  E-value=1.9e-13  Score=123.75  Aligned_cols=101  Identities=17%  Similarity=0.237  Sum_probs=84.8

Q ss_pred             cceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecc
Q 019481           72 RRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDF  151 (340)
Q Consensus        72 ~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DF  151 (340)
                      ..+.|+.|++|...+|.++|..+..  ...-++.....++.|++.|+.|     ++.+|||+||.||++..+..+||.||
T Consensus       328 ~~~lyI~Mn~c~~~tledWl~rr~~--~e~~s~s~~~~~~~q~~~~~~y-----k~~ihrdlkp~nif~~~d~q~kIgDF  400 (516)
T KOG1033|consen  328 KVYLYIQMNLCEKETLEDWLRRRRT--GEERSLSLMLDIFKQIAPAVEY-----KGLIHRDLKPSNIFFSDDDQLKIGDF  400 (516)
T ss_pred             ccchhhhhhhhhhhhHHHHhhCCCc--ccccchhHHHHHHHhhccchhh-----ccchhhhccccccccccchhhhhhhh
Confidence            4468899999999999999986554  2457788899999999999999     66999999999999999999999999


Q ss_pred             ccceeecccC-------CcceeeccceeeccCccc
Q 019481          152 STAKVSAVEN-------ADLTALDTSSVSAQSGKT  179 (340)
Q Consensus       152 Gla~~~~~~~-------~~~~~~gt~~~~~p~~~~  179 (340)
                      |+........       ......||..||+|+.+.
T Consensus       401 gl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~  435 (516)
T KOG1033|consen  401 GLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIR  435 (516)
T ss_pred             hheeecccCCcccchhhhhhhcccccccCCHHHHh
Confidence            9987665544       455678999999996433

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.29  E-value=2.6e-11  Score=102.88  Aligned_cols=142  Identities=14%  Similarity=0.073  Sum_probs=104.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCC--ccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHP--NQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hp--nIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      +.|..+.||++...+ |+.+++|+............+.+|.++++.+.+.  ++.+++.+.....    ..+..++++||
T Consensus         7 ~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~----~~~~~~~v~e~   81 (223)
T cd05154           7 SGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS----VLGTPFYVMER   81 (223)
T ss_pred             CCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC----ccCCceEEEEE
Confidence            468899999998754 5789999986432222345688999999999763  3456665432211    01245689999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcC-------------------------------------
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSS-------------------------------------  124 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~-------------------------------------  124 (340)
                      ++|.++.+.+.. ..     +++.....++.+++++|..||+.                                     
T Consensus        82 i~G~~l~~~~~~-~~-----~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (223)
T cd05154          82 VDGRVLRDRLLR-PE-----LSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPP  155 (223)
T ss_pred             eCCEecCCCCCC-CC-----CCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccH
Confidence            999888876643 22     77788888889999999999862                                     


Q ss_pred             -----------------CCceecCCCCCCcEEecC--CCceEEecccccee
Q 019481          125 -----------------EKQVIYRDFKAPNILLDE--TFKCNLSDFSTAKV  156 (340)
Q Consensus       125 -----------------~~~iiHrDlKp~NILl~~--~~~~kl~DFGla~~  156 (340)
                                       ...++|+|+.|.||+++.  ++.+.|+||+.+..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         156 AMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             HHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence                             135699999999999998  56789999998864

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.18  E-value=1.8e-10  Score=91.48  Aligned_cols=139  Identities=14%  Similarity=0.108  Sum_probs=94.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEe-eccC------chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLH-ELIT------PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCW   76 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~-~~~~------~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~   76 (340)
                      +.|+-+.|+++..  .|+.+.+|.- .+..      ..-..++..+|++.|.++.--.|.--.=+|     +  |...-.
T Consensus        16 kQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~-----~--D~~~~~   86 (229)
T KOG3087|consen   16 KQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIF-----I--DTYGGQ   86 (229)
T ss_pred             eccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEE-----E--ecCCCe
Confidence            4578889999886  4566666653 2211      112346678899999998643333211111     1  111233


Q ss_pred             eeeccccC-CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCc---eEEeccc
Q 019481           77 KNKWLMQK-KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFK---CNLSDFS  152 (340)
Q Consensus        77 ~~~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~---~kl~DFG  152 (340)
                      +.|||.+| .++.+++......   .........++++|-+.+.-||.  +.|+|+||..+||++..++.   +.++|||
T Consensus        87 i~ME~~~g~~~vk~~i~~~~~~---~~~d~~~~~~~~~iG~~igklH~--ndiiHGDLTTSNill~~~~~~~~~~lIdfg  161 (229)
T KOG3087|consen   87 IYMEFIDGASTVKDFILSTMED---ESEDEGLAELARRIGELIGKLHD--NDIIHGDLTTSNILLRSDGNQITPILIDFG  161 (229)
T ss_pred             EEEEeccchhHHHHHHHHHccC---cccchhHHHHHHHHHHHHHHhhh--CCeecccccccceEEecCCCcCceEEEeec
Confidence            77999986 4788888776542   22333347899999999999999  77999999999999976554   5799999


Q ss_pred             ccee
Q 019481          153 TAKV  156 (340)
Q Consensus       153 la~~  156 (340)
                      ++..
T Consensus       162 ls~~  165 (229)
T KOG3087|consen  162 LSSV  165 (229)
T ss_pred             chhc
Confidence            9854

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.17  E-value=3.3e-10  Score=98.24  Aligned_cols=137  Identities=11%  Similarity=0.086  Sum_probs=94.5

Q ss_pred             EEEEEcCCCCceEEEEEeeccCchhhHH----------HHHHHHHHhhhcCCCccc--cccccccccccccCCcceeeee
Q 019481           11 LIHVPFPDDRDDVMLKLHELITPLQLRR----------DDDGKLDSLEEIFHPNQV--KPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus        11 V~~~~~~~~~~~vAiK~~~~~~~~~~~~----------~~~~E~~~l~~l~hpnIv--~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      |.+...  .|+.|.+|...........+          ...+|.+.+.+|...+|.  +...+++...  .......+++
T Consensus        38 vvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~--~~~~~~s~LV  113 (268)
T PRK15123         38 TLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGS--NPATRTSFII  113 (268)
T ss_pred             EEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecC--CCccceeEEE
Confidence            445543  56789999775322111112          377999999888644443  3333332211  1112357799


Q ss_pred             eccccCC-CHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC-------CCceEEec
Q 019481           79 KWLMQKK-GLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE-------TFKCNLSD  150 (340)
Q Consensus        79 ~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~-------~~~~kl~D  150 (340)
                      +|++++. +|.+++.....   ...+......++.+++..+.-||+  .||+|+|+++.|||++.       +..+.++|
T Consensus       114 te~l~~~~sL~~~~~~~~~---~~~~~~~~~~ll~~la~~i~~LH~--~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LID  188 (268)
T PRK15123        114 TEDLAPTISLEDYCADWAT---NPPDPRLKRMLIKRVATMVRDMHA--AGINHRDCYICHFLLHLPFPGREEDLKLSVID  188 (268)
T ss_pred             EeeCCCCccHHHHHHhhcc---cCCCHHHHHHHHHHHHHHHHHHHH--CcCccCCCChhhEEEeccccCCCCCceEEEEE
Confidence            9999875 79999864221   125667788999999999999999  77999999999999975       46799999


Q ss_pred             ccccee
Q 019481          151 FSTAKV  156 (340)
Q Consensus       151 FGla~~  156 (340)
                      |+.++.
T Consensus       189 l~r~~~  194 (268)
T PRK15123        189 LHRAQI  194 (268)
T ss_pred             CCcccc
Confidence            998864

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.08  E-value=9.5e-10  Score=102.95  Aligned_cols=128  Identities=13%  Similarity=0.104  Sum_probs=104.4

Q ss_pred             EE-EEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccCCCHHH
Q 019481           11 LI-HVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLEN   89 (340)
Q Consensus        11 V~-~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~gsL~~   89 (340)
                      +| .|..+.++.+|.+...+.... ...+...+-++.|+.++||||+++++.++..       ...|+++|-+.  .|..
T Consensus        27 ~~~~~t~k~~~~~vsVF~~~~~~~-~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~-------~~~ylvTErV~--Pl~~   96 (690)
T KOG1243|consen   27 LWPDGTRKADGGPVSVFVYKRSNG-EVTELAKRAVKRLKTLRHPNILSYLDTTEEE-------GTLYLVTERVR--PLET   96 (690)
T ss_pred             cccccceeccCCceEEEEEeCCCc-hhhHHHHHHHHHhhhccCchhhhhhhhhccc-------CceEEEeeccc--cHHH
Confidence            44 466778888999999876443 4455677888999999999999999976543       36779999874  6888


Q ss_pred             HhcccCCCccccCCHHHHHHHHHHHHHHHHHhhc-CCCceecCCCCCCcEEecCCCceEEeccccceeec
Q 019481           90 VHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHS-SEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus        90 ~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      +++.        +......--+.||+.||.|||+ |+  ++|++|--+.|+++..|+-||++|-++....
T Consensus        97 ~lk~--------l~~~~v~~Gl~qIl~AL~FL~~d~~--lvHgNv~~~SVfVn~~GeWkLggle~v~~~~  156 (690)
T KOG1243|consen   97 VLKE--------LGKEEVCLGLFQILAALSFLNDDCN--LVHGNVCKDSVFVNESGEWKLGGLELVSKAS  156 (690)
T ss_pred             HHHH--------hHHHHHHHHHHHHHHHHHHHhccCC--eeeccEeeeeEEEcCCCcEEEeeeEEEeccc
Confidence            8876        4456778889999999999985 66  9999999999999999999999999875443

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.08  E-value=3.2e-10  Score=104.77  Aligned_cols=139  Identities=19%  Similarity=0.125  Sum_probs=104.9

Q ss_pred             CCCcceEEEEEEcC-CCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFP-DDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~-~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      +.|.|+.|+.+..+ .++..|++|...+.. .......-..|+-+...+. |.++++++..|....       ..|+-.|
T Consensus       274 ~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r-------~~~ip~e  346 (524)
T KOG0601|consen  274 SDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR-------QGYIPLE  346 (524)
T ss_pred             cCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc-------cccCchh
Confidence            45677777776644 678889998876422 1222222356777766664 899999888665321       3447789


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCC-CceEEecccccee
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDET-FKCNLSDFSTAKV  156 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~-~~~kl~DFGla~~  156 (340)
                      ||+++++...+.-..     .+++...+....|++.++.++|+  ..++|+|+||+||++..+ +..++.|||++..
T Consensus       347 ~~~~~s~~l~~~~~~-----~~d~~~~~~~~~q~~~~l~~i~s--~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~  416 (524)
T KOG0601|consen  347 FCEGGSSSLRSVTSQ-----MLDEDPRLRLTAQILTALNVIHS--KLFVHLDVKPSNILISNDGFFSKLGDFGCWTR  416 (524)
T ss_pred             hhcCcchhhhhHHHH-----hcCcchhhhhHHHHHhccccccc--hhhhcccccccceeeccchhhhhccccccccc
Confidence            999998877664333     38889999999999999999999  779999999999999886 8899999999864

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.08  E-value=1e-09  Score=89.87  Aligned_cols=126  Identities=21%  Similarity=0.247  Sum_probs=80.8

Q ss_pred             EEEEEEcCCCCceEEEEEeeccC-------------------------chhhHHHHHHHHHHhhhcCCC--ccccccccc
Q 019481           10 VLIHVPFPDDRDDVMLKLHELIT-------------------------PLQLRRDDDGKLDSLEEIFHP--NQVKPSGYW   62 (340)
Q Consensus        10 ~V~~~~~~~~~~~vAiK~~~~~~-------------------------~~~~~~~~~~E~~~l~~l~hp--nIv~l~~~f   62 (340)
                      .||.|... .+..+|+|+.+...                         .........+|.+.|+++..-  ++.+.+++-
T Consensus         1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~   79 (188)
T PF01163_consen    1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN   79 (188)
T ss_dssp             EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred             CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence            48999874 45689999988311                         001124467899999999755  345555421


Q ss_pred             cccccccCCcceeeeeecccc--CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHH-hhcCCCceecCCCCCCcEE
Q 019481           63 SMNICLTGDRRYCWKNKWLMQ--KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAF-LHSSEKQVIYRDFKAPNIL  139 (340)
Q Consensus        63 ~~~~~~~~~~~~~~~~~e~~~--~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~y-LH~~~~~iiHrDlKp~NIL  139 (340)
                                 .-.++|||++  |..+..+....       ++......++.+++..+.. +|+  .||+|+||.+.|||
T Consensus        80 -----------~~~ivME~I~~~G~~~~~l~~~~-------~~~~~~~~~~~~il~~~~~~~~~--~givHGDLs~~NIl  139 (188)
T PF01163_consen   80 -----------RNVIVMEYIGEDGVPLPRLKDVD-------LSPEEPKELLEEILEEIIKMLHK--AGIVHGDLSEYNIL  139 (188)
T ss_dssp             -----------TTEEEEE--EETTEEGGCHHHCG-------GGGSTHHHHHHHHHHHHHHHHHC--TTEEESS-STTSEE
T ss_pred             -----------CCEEEEEecCCCccchhhHHhcc-------ccchhHHHHHHHHHHHHHHHHHh--cCceecCCChhhEE
Confidence                       2348999998  55554443322       2234566777888886666 578  66999999999999


Q ss_pred             ecCCCceEEeccccceee
Q 019481          140 LDETFKCNLSDFSTAKVS  157 (340)
Q Consensus       140 l~~~~~~kl~DFGla~~~  157 (340)
                      ++.+ .+.|+|||.|...
T Consensus       140 v~~~-~~~iIDf~qav~~  156 (188)
T PF01163_consen  140 VDDG-KVYIIDFGQAVDS  156 (188)
T ss_dssp             EETT-CEEE--GTTEEET
T ss_pred             eecc-eEEEEecCcceec
Confidence            9877 9999999998654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.03  E-value=2.6e-09  Score=85.25  Aligned_cols=128  Identities=13%  Similarity=0.070  Sum_probs=88.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEE-eeccCc------hhhHHHHHHHHHHhhhcCCCcc--ccccccccccccccCCcce
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKL-HELITP------LQLRRDDDGKLDSLEEIFHPNQ--VKPSGYWSMNICLTGDRRY   74 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~-~~~~~~------~~~~~~~~~E~~~l~~l~hpnI--v~l~~~f~~~~~~~~~~~~   74 (340)
                      ..|+=+.+|.+...  +..+++|. +++..-      .-..++..+|..++.++.--.|  ..++++         |...
T Consensus         5 ~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dv---------D~~~   73 (204)
T COG3642           5 KQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDV---------DPDN   73 (204)
T ss_pred             hCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEE---------cCCC
Confidence            46888889988552  33355555 433111      1123556789999999864333  334441         2234


Q ss_pred             eeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccc
Q 019481           75 CWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTA  154 (340)
Q Consensus        75 ~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla  154 (340)
                      -.++|||.+|-.|.+.+...            ...+++.+-.-+.-||.  .+|+|+||.++||++... ++.++|||++
T Consensus        74 ~~I~me~I~G~~lkd~l~~~------------~~~~~r~vG~~vg~lH~--~givHGDLTtsNiIl~~~-~i~~IDfGLg  138 (204)
T COG3642          74 GLIVMEYIEGELLKDALEEA------------RPDLLREVGRLVGKLHK--AGIVHGDLTTSNIILSGG-RIYFIDFGLG  138 (204)
T ss_pred             CEEEEEEeCChhHHHHHHhc------------chHHHHHHHHHHHHHHh--cCeecCCCccceEEEeCC-cEEEEECCcc
Confidence            45889999988888887753            24466677777888999  669999999999999765 4999999999


Q ss_pred             eee
Q 019481          155 KVS  157 (340)
Q Consensus       155 ~~~  157 (340)
                      ..-
T Consensus       139 ~~s  141 (204)
T COG3642         139 EFS  141 (204)
T ss_pred             ccc
Confidence            753

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.99  E-value=4.9e-09  Score=95.51  Aligned_cols=147  Identities=12%  Similarity=0.059  Sum_probs=112.9

Q ss_pred             eEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC-CCH
Q 019481            9 SVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK-KGL   87 (340)
Q Consensus         9 g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~-gsL   87 (340)
                      .+.|++....+|..|++|+++.... +.......=+++++++.|+|+|++.+.|.+...   .+....+|.+|.++ ++|
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~-~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF---~D~SlvlvYDYyP~s~TL  365 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRD-QSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTF---GDLSLVLVYDYYPSSPTL  365 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccc-cCcccchHHHHHHHHhccCceeehhhhhhhhcc---CcceEEEEEecCCCCchH
Confidence            4689999999999999999943211 111122345788999999999999999974422   33356788999875 578


Q ss_pred             HHHhcccCCC----------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceee
Q 019481           88 ENVHIGEHPA----------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVS  157 (340)
Q Consensus        88 ~~~l~~~~~~----------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~  157 (340)
                      .++.-.....          .+...+|...+.|+.|+..||.++|+  .|..-+-|.|.+||++.+.+++|+..|+.-.+
T Consensus       366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs--sGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl  443 (655)
T KOG3741|consen  366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS--SGLACKTLDLKKILVTGKMRIRISGCGIMDVL  443 (655)
T ss_pred             HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh--cCceeecccHhHeEeeCcceEEEecccceeee
Confidence            8776543332          13457899999999999999999999  66999999999999999999999988888766


Q ss_pred             cccC
Q 019481          158 AVEN  161 (340)
Q Consensus       158 ~~~~  161 (340)
                      .++.
T Consensus       444 ~~d~  447 (655)
T KOG3741|consen  444 QEDP  447 (655)
T ss_pred             cCCC
Confidence            5543

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.99  E-value=4.7e-11  Score=116.23  Aligned_cols=246  Identities=15%  Similarity=0.043  Sum_probs=161.7

Q ss_pred             CCCCcceEEEEEEcCCCCceEEEEEeeccCc--hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            3 GSAPSFSVLIHVPFPDDRDDVMLKLHELITP--LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         3 ~~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .++|++|.+..+.-..++-..+.|+..+...  ....+...++-.++-...+|.+++..-.|       ....-.+++++
T Consensus       812 ~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~-------~~rsP~~L~~~  884 (1205)
T KOG0606|consen  812 SQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSF-------PCRSPLPLVGH  884 (1205)
T ss_pred             ccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCC-------CCCCCcchhhH
Confidence            4688999999988877776677777653111  11223344455555555667777666533       23335679999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc-
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-  159 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-  159 (340)
                      |+.+++|...++.-+.     .+.+-++.+...+.++++|||+  ..+.|||+||.|+|...+|+.+++|||+...... 
T Consensus       885 ~~~~~~~~Skl~~~~~-----~saepaRs~i~~~vqs~e~L~s--~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~  957 (1205)
T KOG0606|consen  885 YLNGGDLPSKLHNSGC-----LSAEPARSPILERVQSLESLHS--SLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLI  957 (1205)
T ss_pred             HhccCCchhhhhcCCC-----cccccccchhHHHHhhhhcccc--chhhcccccccchhhcccCCcccCccccccccccc
Confidence            9999999999998876     7777788888999999999999  7799999999999999999999999984332110 


Q ss_pred             -----c--------------------------CCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCC
Q 019481          160 -----E--------------------------NADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPY  207 (340)
Q Consensus       160 -----~--------------------------~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~  207 (340)
                           .                          .......||+.|.+|+...+.+-. ..+.|+.|....+..+++  .||
T Consensus       958 ~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~--pp~ 1035 (1205)
T KOG0606|consen  958 PPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGI--PPF 1035 (1205)
T ss_pred             cCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCC--CCC
Confidence                 0                          001123567777777544433222 234555555554444444  666


Q ss_pred             CCCcccccCCCccCCchhHHHHHHHHHHHHhhhhccccccCcCCccccccccccCCCCchHHH---HhhcCcce
Q 019481          208 KSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTITFLSALKITGCKSEEGYKNNSSLNPICQ---IVNQHPFY  278 (340)
Q Consensus       208 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~dP~~R~t~~---~ll~hp~~  278 (340)
                      +...-..+...+..+..+|+.-....-...              ...+...+..+|.+|..+.   +...|||+
T Consensus      1036 na~tpq~~f~ni~~~~~~~p~g~~~~s~~a--------------q~~~~~ll~~~~~qr~~a~~~~e~k~~~~~ 1095 (1205)
T KOG0606|consen 1036 NAETPQQIFENILNRDIPWPEGPEEGSYEA--------------QDLINRLLTEEPTQRLGAKGAAEVKGHPFF 1095 (1205)
T ss_pred             CCcchhhhhhccccCCCCCCCCccccChhh--------------hhhhhhhhccCchhccCcccccccccCCcc
Confidence            666666666666666666665332211110              1223344677888887765   88888888

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.97  E-value=5.5e-09  Score=87.59  Aligned_cols=111  Identities=16%  Similarity=0.195  Sum_probs=84.5

Q ss_pred             HHHHHHHHHHhhhcCCCcc--ccccccccccccccCCcceeeeeeccccCC-CHHHHhcccCCCccccCCHHHHHHHHHH
Q 019481           37 RRDDDGKLDSLEEIFHPNQ--VKPSGYWSMNICLTGDRRYCWKNKWLMQKK-GLENVHIGEHPASVRQLRRAERLEIVTK  113 (340)
Q Consensus        37 ~~~~~~E~~~l~~l~hpnI--v~l~~~f~~~~~~~~~~~~~~~~~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~q  113 (340)
                      .....+|...+..|..-+|  .+.+++.+....   .....++++|++++. +|.+++.....     .+......++.+
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~---~~~~s~lite~l~~~~~L~~~~~~~~~-----~~~~~~~~ll~~  126 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKG---GGYRSYLITEALPGAQDLRDLLQQWEQ-----LDPSQRRELLRA  126 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCC---CceeEEEEEEeCCCcccHHHHHHhhcc-----cchhhHHHHHHH
Confidence            4557889988888864333  344443332211   113567889999874 79999987554     667788899999


Q ss_pred             HHHHHHHhhcCCCceecCCCCCCcEEecCCC---ceEEeccccceee
Q 019481          114 MCQDLAFLHSSEKQVIYRDFKAPNILLDETF---KCNLSDFSTAKVS  157 (340)
Q Consensus       114 i~~~L~yLH~~~~~iiHrDlKp~NILl~~~~---~~kl~DFGla~~~  157 (340)
                      ++..+.-||+  .||+|+|+++.|||++.++   .+.++||+-++..
T Consensus       127 l~~~i~~lH~--~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~  171 (206)
T PF06293_consen  127 LARLIAKLHD--AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR  171 (206)
T ss_pred             HHHHHHHHHH--CcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence            9999999999  7799999999999999887   8999999988754

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.72  E-value=1.5e-07  Score=79.73  Aligned_cols=126  Identities=17%  Similarity=0.150  Sum_probs=88.1

Q ss_pred             CcceEEEEEEcCCCCceEEEEEeeccCc-----------------h----hhHHHHHHHHHHhhhcCCC--ccccccccc
Q 019481            6 PSFSVLIHVPFPDDRDDVMLKLHELITP-----------------L----QLRRDDDGKLDSLEEIFHP--NQVKPSGYW   62 (340)
Q Consensus         6 G~fg~V~~~~~~~~~~~vAiK~~~~~~~-----------------~----~~~~~~~~E~~~l~~l~hp--nIv~l~~~f   62 (340)
                      |.=|.||.|.+. .+.++|+|+.+....                 .    -.....++|.++|.+|.-.  .+.+.+++=
T Consensus       102 GKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP~P~~~n  180 (304)
T COG0478         102 GKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVPKPIAWN  180 (304)
T ss_pred             CccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCCCccccc
Confidence            566889999987 567799999873110                 0    1123467899999999754  666766621


Q ss_pred             cccccccCCcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC
Q 019481           63 SMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE  142 (340)
Q Consensus        63 ~~~~~~~~~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~  142 (340)
                                 .-.++||+.+|-.|...-          ++.+....++..|++-+.-+=.  .||+|+|+.+-||++++
T Consensus       181 -----------RHaVvMe~ieG~eL~~~r----------~~~en~~~il~~il~~~~~~~~--~GiVHGDlSefNIlV~~  237 (304)
T COG0478         181 -----------RHAVVMEYIEGVELYRLR----------LDVENPDEILDKILEEVRKAYR--RGIVHGDLSEFNILVTE  237 (304)
T ss_pred             -----------cceeeeehcccceeeccc----------CcccCHHHHHHHHHHHHHHHHH--cCccccCCchheEEEec
Confidence                       344899999986665432          1223344455555555555557  67999999999999999


Q ss_pred             CCceEEeccccce
Q 019481          143 TFKCNLSDFSTAK  155 (340)
Q Consensus       143 ~~~~kl~DFGla~  155 (340)
                      +|.+.++||--+.
T Consensus       238 dg~~~vIDwPQ~v  250 (304)
T COG0478         238 DGDIVVIDWPQAV  250 (304)
T ss_pred             CCCEEEEeCcccc
Confidence            9999999996653

>PRK09902 hypothetical protein; Provisional

Probab=98.57  E-value=1.2e-06  Score=72.49  Aligned_cols=141  Identities=9%  Similarity=-0.036  Sum_probs=95.6

Q ss_pred             CcceEEEEEEcCCCCceEEEEEeec--cCc---hhhHHHHHHHHHHhhhcCCCc--cccccccccccccccCCcceeeee
Q 019481            6 PSFSVLIHVPFPDDRDDVMLKLHEL--ITP---LQLRRDDDGKLDSLEEIFHPN--QVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         6 G~fg~V~~~~~~~~~~~vAiK~~~~--~~~---~~~~~~~~~E~~~l~~l~hpn--Iv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      ||-+-|++.....  +.+=+|.-..  ..+   ......+.+|...++++..-+  +.+.. ++...  ........+++
T Consensus        29 gG~SgV~r~~~~g--~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~--k~~~~~rA~LV  103 (216)
T PRK09902         29 NGMSGVQCVERNG--KKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAV--KIEGEWRALLV  103 (216)
T ss_pred             CCcceEEEEEeCC--cEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeee--ccCCceEEEEE
Confidence            5666677765432  2455665441  111   235677999999999986433  33333 22111  11122246688


Q ss_pred             eccccC-CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCc--eEEeccccce
Q 019481           79 KWLMQK-KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFK--CNLSDFSTAK  155 (340)
Q Consensus        79 ~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~--~kl~DFGla~  155 (340)
                      +|-+.| -||.+++.+...   .+.+......+..+++..+.-||+  .|+.|+|+-+.||+++.++.  ++++||--++
T Consensus       104 Te~L~g~~~L~~~l~~~~~---~~~~~~~k~~il~~va~~ia~LH~--~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r  178 (216)
T PRK09902        104 TEDMAGFISIADWYAQHAV---SPYSDEVRQAMLKAVALAFKKMHS--VNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR  178 (216)
T ss_pred             EEeCCCCccHHHHHhcCCc---CCcchHHHHHHHHHHHHHHHHHHH--CCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence            886653 489998866432   236777788999999999999999  77999999999999987677  9999998765


Q ss_pred             e
Q 019481          156 V  156 (340)
Q Consensus       156 ~  156 (340)
                      .
T Consensus       179 ~  179 (216)
T PRK09902        179 R  179 (216)
T ss_pred             h
Confidence            4

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.54  E-value=3.9e-07  Score=85.78  Aligned_cols=137  Identities=11%  Similarity=0.045  Sum_probs=85.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCch---------------------------------------hhHHHHHHHH
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPL---------------------------------------QLRRDDDGKL   44 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~---------------------------------------~~~~~~~~E~   44 (340)
                      .+++-|.||+|+..+ |+.||||+.......                                       ...-++.+|.
T Consensus       134 AsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~EA  212 (517)
T COG0661         134 ASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRREA  212 (517)
T ss_pred             hhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHHHH
Confidence            367889999999865 889999998731110                                       0011134444


Q ss_pred             HHhhhcC-----CCccc--cccccccccccccCCcceeeeeeccccCCCHHHHh--cccCCCccccCCHHHHHHHHHHHH
Q 019481           45 DSLEEIF-----HPNQV--KPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVH--IGEHPASVRQLRRAERLEIVTKMC  115 (340)
Q Consensus        45 ~~l~~l~-----hpnIv--~l~~~f~~~~~~~~~~~~~~~~~e~~~~gsL~~~l--~~~~~~~~~~l~~~~~~~i~~qi~  115 (340)
                      ..+.+++     .|++.  +.+.-|         ...-.++|||++|-.+.+..  +..+. ..+.+.+..+..++.|+.
T Consensus       213 ~n~~~~~~nf~~~~~v~VP~V~we~---------t~~~VLtmE~i~Gi~i~d~~~l~~~g~-d~k~ia~~~~~~f~~q~~  282 (517)
T COG0661         213 ANAERFRENFKDDPDVYVPKVYWEY---------TTRRVLTMEWIDGIKISDIAALKSAGI-DRKELAELLVRAFLRQLL  282 (517)
T ss_pred             HHHHHHHHHcCCCCCeEeceeehhc---------cCCcEEEEEeeCCEecccHHHHHhcCC-CHHHHHHHHHHHHHHHHH
Confidence            4444442     23322  222101         01335899999998888884  44221 011122333344444443


Q ss_pred             HHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481          116 QDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus       116 ~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      .         .|++|.|..|.||+++.+|++.+.|||+...+++.
T Consensus       283 ~---------dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~  318 (517)
T COG0661         283 R---------DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDPK  318 (517)
T ss_pred             h---------cCccccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence            3         66999999999999999999999999999877653

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.51  E-value=9.7e-07  Score=73.27  Aligned_cols=122  Identities=11%  Similarity=0.069  Sum_probs=73.5

Q ss_pred             CCceEEEEEeeccCchhh--H------HHHHHHHHHhhhcCCCcccccccccc-ccccccCCcceeeeeeccccCCCHHH
Q 019481           19 DRDDVMLKLHELITPLQL--R------RDDDGKLDSLEEIFHPNQVKPSGYWS-MNICLTGDRRYCWKNKWLMQKKGLEN   89 (340)
Q Consensus        19 ~~~~vAiK~~~~~~~~~~--~------~~~~~E~~~l~~l~hpnIv~l~~~f~-~~~~~~~~~~~~~~~~e~~~~gsL~~   89 (340)
                      .++.+++|.........+  .      ....+++..+.+++..+...+-+.|. .......-....+++|||++|..|.+
T Consensus        53 ~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d  132 (229)
T PF06176_consen   53 DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEKKIFRYTSSYVLLMEYIEGVELND  132 (229)
T ss_pred             CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeeeeeeccceeEEEEEEEEecCeeccc
Confidence            456778888764322111  1      11334555555554333333322111 11111111124558999999988876


Q ss_pred             HhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481           90 VHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus        90 ~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      ...         +++.    +..++.+++.-||+  .|+.|+|..|.|++++. +.++++||+..+.
T Consensus       133 ~~~---------i~e~----~~~ki~~~ikqlH~--~G~~HGD~hpgNFlv~~-~~i~iID~~~k~~  183 (229)
T PF06176_consen  133 IED---------IDED----LAEKIVEAIKQLHK--HGFYHGDPHPGNFLVSN-NGIRIIDTQGKRM  183 (229)
T ss_pred             chh---------cCHH----HHHHHHHHHHHHHH--cCCccCCCCcCcEEEEC-CcEEEEECccccc
Confidence            532         3432    44567788999999  77999999999999985 4599999987654

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.47  E-value=1.2e-08  Score=100.54  Aligned_cols=141  Identities=13%  Similarity=0.005  Sum_probs=77.0

Q ss_pred             HHHHhhcCCCceecCCCCCC-cEEecCCCceEEeccccceeecccCC---cceeeccceeeccCccccchhh-hhHhHhC
Q 019481          117 DLAFLHSSEKQVIYRDFKAP-NILLDETFKCNLSDFSTAKVSAVENA---DLTALDTSSVSAQSGKTGMEMK-MAQLESG  191 (340)
Q Consensus       117 ~L~yLH~~~~~iiHrDlKp~-NILl~~~~~~kl~DFGla~~~~~~~~---~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~  191 (340)
                      +..|.|.. ..-.|++.+|. |++++..+..++.|||.++....+..   ..+.+||+.|++||.+.+..+- ..|+|+.
T Consensus       488 ~~~~~~~~-~~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~DiwSl  566 (669)
T cd05610         488 GSQSGSYP-AITPTQKPRPHGNLYQTPKQVKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVDWWAL  566 (669)
T ss_pred             ccccCCCc-ccCCCCCCCCCCceeECCccccccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHHHHHH
Confidence            34445541 12345666666 66667777789999999887654322   3456789999999755543322 2356665


Q ss_pred             CccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhcccccc-CcCC---ccccccccccCCCCch
Q 019481          192 GWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTITFLSA-LKIT---GCKSEEGYKNNSSLNP  267 (340)
Q Consensus       192 g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p---~~~~~~~l~~dP~~R~  267 (340)
                      |+.++++.++.  .||...........+                  +...+.+... ...+   ..+...||..||.+||
T Consensus       567 G~il~ElltG~--~pf~~~~~~~~~~~i------------------l~~~~~~p~~~~~~~~~~~~~l~~lL~~dP~~R~  626 (669)
T cd05610         567 GVCLFEFLTGI--PPFNDETPQQVFQNI------------------LNRDIPWPEGEEKLSVNAQNAIEILLTMDPTKRA  626 (669)
T ss_pred             HHHHHHHHHCC--CCCCCCCHHHHHHHH------------------HhcCCCCCcccccCCHHHHHHHHHHcccChhHCc
Confidence            55555544433  333221110000000                  0000111000 0111   1123357999999999


Q ss_pred             HHHHhhcCcce
Q 019481          268 ICQIVNQHPFY  278 (340)
Q Consensus       268 t~~~ll~hp~~  278 (340)
                      ++++++.|||+
T Consensus       627 ta~e~l~h~~~  637 (669)
T cd05610         627 GLKELKQHPLF  637 (669)
T ss_pred             CHHHHHhCHhh
Confidence            99999999999

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.41  E-value=2.6e-06  Score=72.60  Aligned_cols=143  Identities=13%  Similarity=0.069  Sum_probs=78.4

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCc--cccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPN--QVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpn--Iv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ++|..+.||++...+  ..+++|+....   .....+.+|..+++.+....  +.+++.+....    ......+.++++
T Consensus         6 ~~G~~n~~~~v~~~~--~~~vlK~~~~~---~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~----~~~~~~~~~~~~   76 (239)
T PF01636_consen    6 SGGFSNRVYRVTTDD--GRYVLKFYRPP---DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSD----EFNGFPYLLMEY   76 (239)
T ss_dssp             EESSSSEEEEEEETT--SEEEEEEESSH---HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEET----EETSEEEEEEEE
T ss_pred             CCCCeeeEEEEEECC--cEEEEEEeCCC---CCHHHHHHHHHHHHHHHhcCCCCceEEeecccc----cccccceEEEEE
Confidence            457788999998765  47999998532   45567889999998886433  34555422111    122246789999


Q ss_pred             ccCCCHHH----------------Hh---cccCCCccccCCHHH---------HHHH------------HHHHHH-HHHH
Q 019481           82 MQKKGLEN----------------VH---IGEHPASVRQLRRAE---------RLEI------------VTKMCQ-DLAF  120 (340)
Q Consensus        82 ~~~gsL~~----------------~l---~~~~~~~~~~l~~~~---------~~~i------------~~qi~~-~L~y  120 (340)
                      ++|.++..                .+   +..... ........         ....            ...+.. .++.
T Consensus        77 i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (239)
T PF01636_consen   77 IPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPP-FSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQE  155 (239)
T ss_dssp             ESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTT-CCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred             eccccccccccccccccccccchhhhhhccccccc-ccccccccccccccccccccccccccchhhhhhhHHHHHHHHHH
Confidence            98877776                11   111000 00011000         0000            111222 2333


Q ss_pred             hhc-----CCCceecCCCCCCcEEec-CCCceEEecccccee
Q 019481          121 LHS-----SEKQVIYRDFKAPNILLD-ETFKCNLSDFSTAKV  156 (340)
Q Consensus       121 LH~-----~~~~iiHrDlKp~NILl~-~~~~~kl~DFGla~~  156 (340)
                      +++     ....++|+|+.|.||+++ +++++-|+||+.+..
T Consensus       156 ~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  156 LEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             HHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred             HHhhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence            331     226699999999999999 677778999998754

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.41  E-value=4.3e-06  Score=70.29  Aligned_cols=135  Identities=13%  Similarity=-0.015  Sum_probs=92.1

Q ss_pred             CCCCcceEEEEEEcCCCCceEEEEEeeccCchh------------------h-----HHHHHHHHHHhhhcC--CCcccc
Q 019481            3 GSAPSFSVLIHVPFPDDRDDVMLKLHELITPLQ------------------L-----RRDDDGKLDSLEEIF--HPNQVK   57 (340)
Q Consensus         3 ~~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~------------------~-----~~~~~~E~~~l~~l~--hpnIv~   57 (340)
                      .|+|.-+.||+|.. .++..+|+|+.+......                  .     ..-..+|...|+++.  +-.+.+
T Consensus        56 istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~  134 (268)
T COG1718          56 ISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE  134 (268)
T ss_pred             ecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence            58899999999976 457889999998421110                  0     011356777777774  333445


Q ss_pred             ccccccccccccCCcceeeeeeccccCC-CHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhc-CCCceecCCCCC
Q 019481           58 PSGYWSMNICLTGDRRYCWKNKWLMQKK-GLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHS-SEKQVIYRDFKA  135 (340)
Q Consensus        58 l~~~f~~~~~~~~~~~~~~~~~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~~~iiHrDlKp  135 (340)
                      -+..+           ...++|||+... .-.-.|+.-      ++....+..+..++++.+.-|=. ++  ++|+||..
T Consensus       135 Pi~~~-----------~nVLvMEfIg~~g~pAP~LkDv------~~e~~e~~~~~~~~v~~~~~l~~~a~--LVHgDLSE  195 (268)
T COG1718         135 PIAFR-----------NNVLVMEFIGDDGLPAPRLKDV------PLELEEAEGLYEDVVEYMRRLYKEAG--LVHGDLSE  195 (268)
T ss_pred             ceeec-----------CCeEEEEeccCCCCCCCCcccC------CcCchhHHHHHHHHHHHHHHHHHhcC--cccccchh
Confidence            45533           344899998532 112222222      13444677888888888888766 77  99999999


Q ss_pred             CcEEecCCCceEEeccccceeec
Q 019481          136 PNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus       136 ~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      -|||+. ++.+.|+|||-|....
T Consensus       196 yNiL~~-~~~p~iID~~QaV~~~  217 (268)
T COG1718         196 YNILVH-DGEPYIIDVSQAVTID  217 (268)
T ss_pred             hheEEE-CCeEEEEECccccccC
Confidence            999998 8999999999986654

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.34  E-value=5.5e-06  Score=70.42  Aligned_cols=136  Identities=13%  Similarity=0.048  Sum_probs=74.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCcc--ccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQ--VKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnI--v~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .+|..+.||+..    +..+++|+.....   ......+|.++++.+..-++  .+.+++       ..+.+...++||+
T Consensus        10 ~~G~t~~~y~~~----~~~~VlR~~~~~~---~~~~i~~E~~~l~~l~~~glpvP~~~~~-------~~~~~~~glv~e~   75 (226)
T TIGR02172        10 GEGGNGESYTHK----TGKWMLKLYNPGF---DKETIKREFDASRKVFSLGIPTPHPFDL-------VEDGGRLGLIYEL   75 (226)
T ss_pred             cCCCCcceeEec----CCCEEEEeCCCCC---CHHHHHHHHHHHHHHHHcCCCCCceEEE-------EecCCeeeeeeee
Confidence            467888999842    4457889886422   23446889999988864333  344441       1123345678999


Q ss_pred             ccCCC-HHHH---------------------hcccCCCccccCCHHHHHHHHH----------HHHHH-HHHhh--cCCC
Q 019481           82 MQKKG-LENV---------------------HIGEHPASVRQLRRAERLEIVT----------KMCQD-LAFLH--SSEK  126 (340)
Q Consensus        82 ~~~gs-L~~~---------------------l~~~~~~~~~~l~~~~~~~i~~----------qi~~~-L~yLH--~~~~  126 (340)
                      ++|.+ +...                     ++..... ...++... ..+..          ++.+. ..+|.  ....
T Consensus        76 i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~-~~~l~~~~-~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~  153 (226)
T TIGR02172        76 IVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCD-TSTFQSYK-EKIRKFIEEKDFVPKDYKEKARAFIKEVPDTS  153 (226)
T ss_pred             cCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCC-CCcHHHHH-HHHHHHHHhccCCCHHHHHHHHHHHHhCCCCC
Confidence            98753 2111                     1111000 00111100 00000          01111 12222  2224


Q ss_pred             ceecCCCCCCcEEecCCCceEEecccccee
Q 019481          127 QVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus       127 ~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      .++|+|+.|.||+++.++ +.++||+.+..
T Consensus       154 ~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~  182 (226)
T TIGR02172       154 TCLHGDFQIGNLITSGKG-TYWIDLGDFGY  182 (226)
T ss_pred             ceEecCCCCCcEEEcCCC-cEEEechhcCc
Confidence            578999999999999888 99999998753

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=98.15  E-value=1.3e-05  Score=75.45  Aligned_cols=136  Identities=11%  Similarity=0.026  Sum_probs=82.0

Q ss_pred             CcceEEEEEEcCCCCceEEEEEeeccCch------------------------------hhHHH------HHHHHHHhhh
Q 019481            6 PSFSVLIHVPFPDDRDDVMLKLHELITPL------------------------------QLRRD------DDGKLDSLEE   49 (340)
Q Consensus         6 G~fg~V~~~~~~~~~~~vAiK~~~~~~~~------------------------------~~~~~------~~~E~~~l~~   49 (340)
                      -+.|.||+|+.+. |+.||+|+-+.....                              +..+.      |.+|.+...+
T Consensus       172 ASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~  250 (538)
T KOG1235|consen  172 ASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAKNAER  250 (538)
T ss_pred             cchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHHhHHH
Confidence            4679999999877 889999997632111                              11111      3334433333


Q ss_pred             c----CCCc------cccccccccccccccCCcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHH
Q 019481           50 I----FHPN------QVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLA  119 (340)
Q Consensus        50 l----~hpn------Iv~l~~~f~~~~~~~~~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~  119 (340)
                      +    .|-+      |.++|-.+.+         .-.++||||+|..+.|.-.-...    .++...+..-+.+...-. 
T Consensus       251 ~~~~f~~~~~~~~V~VP~Vy~~~st---------~RVLtME~~~G~~i~Dl~~i~~~----gi~~~~i~~~l~~~~~~q-  316 (538)
T KOG1235|consen  251 FRENFKDFSLLTYVLVPKVYWDLST---------KRVLTMEYVDGIKINDLDAIDKR----GISPHDILNKLVEAYLEQ-  316 (538)
T ss_pred             HHHHHHhcccccceeCCeehhhcCc---------ceEEEEEecCCccCCCHHHHHHc----CCCHHHHHHHHHHHHHHH-
Confidence            2    3444      3444432211         34589999999877665332222    255554443333321111 


Q ss_pred             HhhcCCCceecCCCCCCcEEecC----CCceEEeccccceeecc
Q 019481          120 FLHSSEKQVIYRDFKAPNILLDE----TFKCNLSDFSTAKVSAV  159 (340)
Q Consensus       120 yLH~~~~~iiHrDlKp~NILl~~----~~~~kl~DFGla~~~~~  159 (340)
                       +=.  .|.+|.|=.|-||+++.    ++++.+-|||+.+.+..
T Consensus       317 -If~--~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  317 -IFK--TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             -HHh--cCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence             112  66999999999999983    67899999999887654

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.14  E-value=2.8e-05  Score=66.99  Aligned_cols=138  Identities=14%  Similarity=0.079  Sum_probs=78.1

Q ss_pred             CCcc-eEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSF-SVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~f-g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|.. +.||+....  +..+.+|+.....    ...+.+|+++++.+. +--+.+++++..       +.+.-+++||++
T Consensus         8 ~g~~~~~v~~~~~~--~~~~~vk~~~~~~----~~~~~~E~~~l~~l~~~~~vP~v~~~~~-------~~~~~~lv~e~i   74 (244)
T cd05150           8 EGQSGATVYRLDGK--NPGLYLKIAPSGP----TYELEREAERLRWLAGKLPVPEVIDYGS-------DDGRAWLLTSAV   74 (244)
T ss_pred             CCCCcCeEEEEcCC--CCcEEEEecCCCc----ccchHHHHHHHHHHHhcCCCCeEEEEEe-------cCCccEEEEEee
Confidence            3444 789999754  3578888875321    345678999988884 333445555332       112456889999


Q ss_pred             cCCCHHHHh-------------------cccCCCccccCCHH--HHHHH-----------------------HHHHHHHH
Q 019481           83 QKKGLENVH-------------------IGEHPASVRQLRRA--ERLEI-----------------------VTKMCQDL  118 (340)
Q Consensus        83 ~~gsL~~~l-------------------~~~~~~~~~~l~~~--~~~~i-----------------------~~qi~~~L  118 (340)
                      +|.+|.+..                   +..... ..++...  .....                       ..++...|
T Consensus        75 ~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  153 (244)
T cd05150          75 PGVPAAALWEELEPERLVDALAEALRRLHALPVA-DCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAEL  153 (244)
T ss_pred             CCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcc-cCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHH
Confidence            887765432                   111100 0011100  00000                       11122222


Q ss_pred             HHhh--cCCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481          119 AFLH--SSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus       119 ~yLH--~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      .-..  ......+|+|+.|.|||++.++.+.|+||+.|..
T Consensus       154 ~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~  193 (244)
T cd05150         154 EATRPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV  193 (244)
T ss_pred             HhhCCCcCceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence            1111  0115589999999999999987788999998754

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PLN02876 acyl-CoA dehydrogenase

Probab=98.13  E-value=2.9e-05  Score=78.58  Aligned_cols=79  Identities=8%  Similarity=-0.078  Sum_probs=49.3

Q ss_pred             CCCcceEEEEEEcCCCC--ceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CCcc--ccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPFPDDR--DDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HPNQ--VKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~--~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnI--v~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      ++|.++.+|+.....++  ..+++|+............+.+|.++|+.+. |+++  .+.+.+..+..    ..+..|++
T Consensus        47 ~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~----v~G~~flV  122 (822)
T PLN02876         47 GHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDAS----VIGTAFYI  122 (822)
T ss_pred             CCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCC----cCCCceEE
Confidence            36677889988765432  3577777653222223356889999999996 6665  55555333211    11246789


Q ss_pred             eccccCCC
Q 019481           79 KWLMQKKG   86 (340)
Q Consensus        79 ~e~~~~gs   86 (340)
                      |||++|..
T Consensus       123 ME~v~G~~  130 (822)
T PLN02876        123 MEYLEGRI  130 (822)
T ss_pred             EEecCCcc
Confidence            99998754

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=98.05  E-value=1.6e-05  Score=65.46  Aligned_cols=101  Identities=13%  Similarity=-0.020  Sum_probs=77.0

Q ss_pred             HHHHHHhhhcCC-CccccccccccccccccCCcceeeeeeccccCCCHHHH---hcccCCCccccCCHHHHHHHHHHHHH
Q 019481           41 DGKLDSLEEIFH-PNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENV---HIGEHPASVRQLRRAERLEIVTKMCQ  116 (340)
Q Consensus        41 ~~E~~~l~~l~h-pnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~gsL~~~---l~~~~~~~~~~l~~~~~~~i~~qi~~  116 (340)
                      ..|.-+++.+.+ +++.+++|+.           .-+.+.||...+++...   +.+...     -+|..+.+++.++++
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~C-----------G~~~v~E~~~~~~~~~~~~~l~~~~~-----~~w~~R~~iA~~lL~   70 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSC-----------GRFYVVEYVGAGSLYGIYRPLSQFLQ-----SPWEQRAKIALQLLE   70 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeEC-----------CCEEEEEeecCccccccccccccccc-----cCHHHHHHHHHHHHH
Confidence            458888888876 6999999933           12356788877666432   111122     689999999999999


Q ss_pred             HHHHhhc-CCCceecCCCCCCcEEecCCCceEEeccccceee
Q 019481          117 DLAFLHS-SEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVS  157 (340)
Q Consensus       117 ~L~yLH~-~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~  157 (340)
                      .+.++++ ....+.-.|++|+|+.++++|++|++|...+...
T Consensus        71 ~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~  112 (188)
T PF12260_consen   71 LLEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE  112 (188)
T ss_pred             HHHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence            9999998 2234677999999999999999999999876543

Proteins in this uncharacterised family are described as transmembrane proteins.

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=98.03  E-value=6.6e-05  Score=64.32  Aligned_cols=31  Identities=19%  Similarity=0.219  Sum_probs=25.9

Q ss_pred             CceecCCCCCCcEEecCCCceEEecccccee
Q 019481          126 KQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus       126 ~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      ..++|+|+.|.||+++.++..-|+||+.|..
T Consensus       164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~  194 (235)
T cd05155         164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV  194 (235)
T ss_pred             ceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence            4589999999999998765567999998754

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.01  E-value=3.1e-06  Score=79.50  Aligned_cols=148  Identities=18%  Similarity=0.075  Sum_probs=104.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCc-cccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPN-QVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpn-Iv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+++.++|.+...+...+ .+++...      ....-++++|.+++||| .+..++       ..+.+.+.++.++++.
T Consensus       252 K~altknpKkRptaeklL~-h~fvs~~------l~~rl~~eLLdK~n~P~~~v~~~~-------d~~~E~~~~i~~~i~s  317 (829)
T KOG0576|consen  252 KGALTKNPKKRPTAEKLLQ-HPFVSQT------LSRRLAIELLDKVNNPNPVVRYLE-------DYDGEDYLWIPMRICS  317 (829)
T ss_pred             HHHhcCCCccCCChhhhee-ceeeccc------hhhHHHHHHHHHccCCCCcccccc-------cCCcccccchhhhhhc
Confidence            3677888888776655544 6666321      33456889999999999 666666       2345668889999998


Q ss_pred             CC-CHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           84 KK-GLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        84 ~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      +| +-........    ..+.+-+...+.+.-.++++++|+  -.-+|||    ||+..+ +..|..||+.+..+.....
T Consensus       318 ~~rs~~~~~~~se----~~~~~~~~~~~~r~et~~l~~l~~--~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~~  386 (829)
T KOG0576|consen  318 TGRSSALEMTVSE----IALEQYQFAYPLRKETRPLAELHS--SYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTMK  386 (829)
T ss_pred             CCccccccCChhh----Hhhhhhhhhhhhhhhccccccccc--ccccCcc----cccccc-cccccccccCCcccCcccc
Confidence            87 3222222111    125555666777888899999999  4469999    887754 7889999999988877666


Q ss_pred             cceeeccceeeccCc
Q 019481          163 DLTALDTSSVSAQSG  177 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~  177 (340)
                      ..+..+|+..++|+.
T Consensus       387 ~~t~~~~~~~~~pev  401 (829)
T KOG0576|consen  387 PRTAIGTPEPLAPEV  401 (829)
T ss_pred             cccCCCCCCCCCchh
Confidence            677788888888853

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.90  E-value=6.4e-05  Score=65.29  Aligned_cols=137  Identities=10%  Similarity=-0.018  Sum_probs=75.1

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccc-cccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQV-KPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv-~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ++|-.+.+|+..  .+++.+++|+........ .-+..+|.++++.+...+++ +++..         +.  -++++||+
T Consensus         5 ~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~i~~---------~~--~~~v~e~i   70 (256)
T TIGR02721         5 SGGLTNRSWRIE--HPGISFVWRPQSPVCKAL-GVDRQREYQILQALSALGLAPKPILV---------NE--HWLLVEWL   70 (256)
T ss_pred             CCcCcCCeEEEE--eCCccEEEeeCCcccccc-cCcHHHHHHHHHHHHhcCCCCceEEE---------eC--CEEEEEec
Confidence            467778899887  456678899865321111 01357799999988643332 33331         11  13778998


Q ss_pred             cCCCHHHH-----------------hcccCCCccccCCHH-HHHHHHHHH---------HHHHHHhhc------CCCcee
Q 019481           83 QKKGLENV-----------------HIGEHPASVRQLRRA-ERLEIVTKM---------CQDLAFLHS------SEKQVI  129 (340)
Q Consensus        83 ~~gsL~~~-----------------l~~~~~~~~~~l~~~-~~~~i~~qi---------~~~L~yLH~------~~~~ii  129 (340)
                      +|..+...                 ++..... ..+++.. ....+..++         ..-+..+-+      ....++
T Consensus        71 ~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  149 (256)
T TIGR02721        71 EGEVITLDQFVALDLLLELAALLHQLHSQPRF-GYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPL  149 (256)
T ss_pred             cCcccccccccCchhHHHHHHHHHHHhCCCCC-CCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeee
Confidence            87654321                 1221110 1112211 111221111         111111111      113589


Q ss_pred             cCCCCCCcEEecCCCceEEecccccee
Q 019481          130 YRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus       130 HrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      |+|+.|.||+++.++ +.++||..|..
T Consensus       150 H~Dl~~~Nil~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       150 HMDVHAYNLVVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             cCCCCcCcEEEeCCC-CEEEeccccCc
Confidence            999999999999877 78999998854

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.88  E-value=0.00013  Score=62.37  Aligned_cols=31  Identities=19%  Similarity=0.221  Sum_probs=27.2

Q ss_pred             CceecCCCCCCcEEecC-CCceEEecccccee
Q 019481          126 KQVIYRDFKAPNILLDE-TFKCNLSDFSTAKV  156 (340)
Q Consensus       126 ~~iiHrDlKp~NILl~~-~~~~kl~DFGla~~  156 (340)
                      ..++|+|+.+.|||++. ++.+.++||..|..
T Consensus       170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~  201 (235)
T cd05157         170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY  201 (235)
T ss_pred             EEEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence            46999999999999998 57899999988753

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.86  E-value=1.4e-05  Score=75.75  Aligned_cols=48  Identities=21%  Similarity=0.324  Sum_probs=41.1

Q ss_pred             HHHHHHHHHHHhhc-CCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481          110 IVTKMCQDLAFLHS-SEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus       110 i~~qi~~~L~yLH~-~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      =+.+++.|+.|+|. ++  +||++|.|++|.++.++..||+.|+.+.....
T Consensus       104 nl~~v~dgl~flh~sAk--~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~  152 (700)
T KOG2137|consen  104 NLGNVADGLAFLHRSAK--VVHGNIQPEAIVVNANGDWKLAGFSFCVNANG  152 (700)
T ss_pred             hhhcccchhhhhccCcc--eeecccchhheeeccCcceeeccchhhhccCC
Confidence            33456699999998 66  99999999999999999999999998865544

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.85  E-value=0.00011  Score=65.51  Aligned_cols=30  Identities=33%  Similarity=0.270  Sum_probs=27.1

Q ss_pred             CceecCCCCCCcEEecCC----CceEEeccccce
Q 019481          126 KQVIYRDFKAPNILLDET----FKCNLSDFSTAK  155 (340)
Q Consensus       126 ~~iiHrDlKp~NILl~~~----~~~kl~DFGla~  155 (340)
                      ..++|+|+.|.|||++.+    +.++++||..|.
T Consensus       179 ~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~  212 (302)
T cd05156         179 VVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS  212 (302)
T ss_pred             ceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence            568999999999999985    889999999885

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=97.69  E-value=4.6e-05  Score=76.47  Aligned_cols=129  Identities=19%  Similarity=0.096  Sum_probs=86.8

Q ss_pred             HHHHHHHHHHhhhcCCCccccccccccccccccCCcc-eeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHH
Q 019481           37 RRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRR-YCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMC  115 (340)
Q Consensus        37 ~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~-~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~  115 (340)
                      ......|+..+.++.|+|++.++.|-....    ..+ ...+..+++++-++...+..-..     ++..+.+.+..+.+
T Consensus       226 i~~~E~e~~~l~k~~~~n~~~~~~~~le~~----~~g~~~~v~~~~~s~~~~~~~~q~v~~-----i~~~~~r~~~~~~~  296 (1351)
T KOG1035|consen  226 IQTTEIELESLSKIAHDNLGGYFVYGLERL----FRGIVLDVLQEICSKVELRSLLQSVGS-----IPLETLRILHQKLL  296 (1351)
T ss_pred             HHHHHHHHHHHHhhccccccceeEEeehhh----cchHHHHHHHhhcCccchHHHHhhccc-----cCHHHHHHHHHHHh
Confidence            344566777889999999999988543221    111 22234478988899999988776     89999999999999


Q ss_pred             HHHHHhhcCCCceecCCCCCC---cEEecCCCceEEe--ccccceeecccCCcceeeccceeeccC
Q 019481          116 QDLAFLHSSEKQVIYRDFKAP---NILLDETFKCNLS--DFSTAKVSAVENADLTALDTSSVSAQS  176 (340)
Q Consensus       116 ~~L~yLH~~~~~iiHrDlKp~---NILl~~~~~~kl~--DFGla~~~~~~~~~~~~~gt~~~~~p~  176 (340)
                      +||.|+|+  ....|.=+..+   +--.+..+...++  ||+.++............-+..+.+++
T Consensus       297 ~GL~~~h~--~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e  360 (1351)
T KOG1035|consen  297 EGLAYLHS--LSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADE  360 (1351)
T ss_pred             hhHHHHHH--hccceeEEecccccccccCccceeecchhhhcccccCCCcccchhhcCcccccccc
Confidence            99999999  54555444333   3334556667766  888887766544433333333344443

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.60  E-value=0.0009  Score=55.41  Aligned_cols=128  Identities=16%  Similarity=0.152  Sum_probs=79.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC---------------chhhHHHHHHHHHHhhhcC------CCcccccccccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT---------------PLQLRRDDDGKLDSLEEIF------HPNQVKPSGYWS   63 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~---------------~~~~~~~~~~E~~~l~~l~------hpnIv~l~~~f~   63 (340)
                      +|+.=.||.--  . .....||+.....               .....++..+|+.....+.      +.+|.+++|+.+
T Consensus        11 ~G~~R~cy~HP--~-dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~ve   87 (199)
T PF10707_consen   11 QGGERDCYQHP--D-DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYGFVE   87 (199)
T ss_pred             cCCCceEEECC--C-CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeEEEe
Confidence            45556677533  2 2336788886533               1122456677777766666      789999999776


Q ss_pred             ccccccCCcceeeeeecccc------CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCc
Q 019481           64 MNICLTGDRRYCWKNKWLMQ------KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPN  137 (340)
Q Consensus        64 ~~~~~~~~~~~~~~~~e~~~------~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~N  137 (340)
                      ++-       ..-+++|.+.      .-+|.++++...      +++ .....+.   +-.+||-+  .+|+.+|++|.|
T Consensus        88 T~~-------G~Glv~e~I~d~dG~~s~TL~~~l~~~~------~~~-~~~~~L~---~f~~~l~~--~~Iv~~dl~~~N  148 (199)
T PF10707_consen   88 TNL-------GLGLVVELIRDADGNISPTLEDYLKEGG------LTE-ELRQALD---EFKRYLLD--HHIVIRDLNPHN  148 (199)
T ss_pred             cCC-------ceEEEEEEEECCCCCcCccHHHHHHcCC------ccH-HHHHHHH---HHHHHHHH--cCCeecCCCccc
Confidence            653       2234555322      237889886543      555 3333333   33566777  779999999999


Q ss_pred             EEecCC--C--ceEEec-cccc
Q 019481          138 ILLDET--F--KCNLSD-FSTA  154 (340)
Q Consensus       138 ILl~~~--~--~~kl~D-FGla  154 (340)
                      |++..+  +  .+.|+| ||-.
T Consensus       149 Iv~~~~~~~~~~lvlIDG~G~~  170 (199)
T PF10707_consen  149 IVVQRRDSGEFRLVLIDGLGEK  170 (199)
T ss_pred             EEEEecCCCceEEEEEeCCCCc
Confidence            999643  2  477777 4543

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.52  E-value=0.00086  Score=53.68  Aligned_cols=122  Identities=16%  Similarity=0.111  Sum_probs=81.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccc-cccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQV-KPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv-~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|.+|.||++...  +..+|+|+-..   ......+..|.++|..++--++. ++|.|-           .-++.|||..
T Consensus        32 KG~~s~Vyl~~~~--~~~~a~Kvrr~---ds~r~~l~kEakiLeil~g~~~~p~vy~yg-----------~~~i~me~i~   95 (201)
T COG2112          32 KGTTSVVYLGEWR--GGEVALKVRRR---DSPRRNLEKEAKILEILAGEGVTPEVYFYG-----------EDFIRMEYID   95 (201)
T ss_pred             cccccEEEEeecc--CceEEEEEecC---CcchhhHHHHHHHHHHhhhcCCCceEEEec-----------hhhhhhhhhc
Confidence            5899999999874  45789998753   34457789999999999866654 444421           2235599999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCC-CCcEEecCCCceEEecccccee
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFK-APNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlK-p~NILl~~~~~~kl~DFGla~~  156 (340)
                      |-+|.+.-...        +.++    ...+++.---|-.  .||-|..|. |..+++..++.+-|+||.-|..
T Consensus        96 G~~L~~~~~~~--------~rk~----l~~vlE~a~~LD~--~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~  155 (201)
T COG2112          96 GRPLGKLEIGG--------DRKH----LLRVLEKAYKLDR--LGIEHGELSRPWKNVLVNDRDVYIIDFDSATF  155 (201)
T ss_pred             Ccchhhhhhcc--------cHHH----HHHHHHHHHHHHH--hccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence            87887654421        1222    2344455333444  559999886 4455555566999999999873

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.49  E-value=0.00047  Score=61.19  Aligned_cols=145  Identities=17%  Similarity=0.025  Sum_probs=77.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCc--cccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPN--QVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpn--Iv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      +|....+|+....  +..+++|+...    .....+..|++++..+.+.+  +.+.+..- .+..+....+..+.+++++
T Consensus        24 ~G~~n~~y~v~~~--~~~~vLr~~~~----~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~-~g~~~~~~~~~~~~l~~~i   96 (296)
T cd05153          24 AGIENTNYFVTTD--SGRYVLTLFEK----VSAEELPFFLALLDHLAERGLPVPRPIADR-DGEYLSELAGKPAALVEFL   96 (296)
T ss_pred             CccccceEEEEeC--CCcEEEEEcCC----CChHhccHHHHHHHHHHHCCCCCCccccCC-CCcEeeeeCCceEEEEEeC
Confidence            4555789988643  34688898853    22345677888888885332  34444321 1111112233557888998


Q ss_pred             cCCCHHH-----------H---hcccCCC---c---cccCCHHHH----------HHHHHHHHHHHHHhhc-----CCCc
Q 019481           83 QKKGLEN-----------V---HIGEHPA---S---VRQLRRAER----------LEIVTKMCQDLAFLHS-----SEKQ  127 (340)
Q Consensus        83 ~~gsL~~-----------~---l~~~~~~---~---~~~l~~~~~----------~~i~~qi~~~L~yLH~-----~~~~  127 (340)
                      +|.++..           .   ++.....   .   .....|...          ......+..+++++-+     ...+
T Consensus        97 ~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~  176 (296)
T cd05153          97 AGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPRG  176 (296)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCCc
Confidence            8765422           0   1110000   0   000111110          0011112233334332     2246


Q ss_pred             eecCCCCCCcEEecCCCceEEecccccee
Q 019481          128 VIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus       128 iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      ++|+|+.|.||+++.++.+.|+||+.+..
T Consensus       177 l~HgD~~~~Nil~~~~~~~~iIDfe~a~~  205 (296)
T cd05153         177 VIHADLFRDNVLFDGDELSGVIDFYFACT  205 (296)
T ss_pred             CCccCcCcccEEEeCCceEEEeehhhhcC
Confidence            99999999999999887778999998743

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.44  E-value=0.0024  Score=58.70  Aligned_cols=73  Identities=10%  Similarity=-0.019  Sum_probs=49.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc-----Cc-hhhHHHHHHHHHHhhhcC---CCccccccccccccccccCCcce
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI-----TP-LQLRRDDDGKLDSLEEIF---HPNQVKPSGYWSMNICLTGDRRY   74 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~-----~~-~~~~~~~~~E~~~l~~l~---hpnIv~l~~~f~~~~~~~~~~~~   74 (340)
                      ++|.+..||++....+++.+++|.-...     .. ....++...|.+.|+.+.   -.++.+++.+         +...
T Consensus        35 ggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~---------D~~~  105 (401)
T PRK09550         35 GDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY---------DEEL  105 (401)
T ss_pred             CCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE---------CCCC
Confidence            6788899999998765568999985421     10 123456778888888863   2456666662         3335


Q ss_pred             eeeeeccccCC
Q 019481           75 CWKNKWLMQKK   85 (340)
Q Consensus        75 ~~~~~e~~~~g   85 (340)
                      .+++||++++.
T Consensus       106 ~~lVME~L~~~  116 (401)
T PRK09550        106 AVTVMEDLSDH  116 (401)
T ss_pred             CEEEEecCCCc
Confidence            67899988753

>PLN02236 choline kinase

Probab=97.44  E-value=0.00077  Score=61.17  Aligned_cols=140  Identities=14%  Similarity=0.179  Sum_probs=76.4

Q ss_pred             CCCcceEEEEEEcCC----CCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccc-cccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPFPD----DRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQV-KPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~----~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv-~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      ++|-.-.+|++....    +++.|++|+.....  ...-+..+|..+++.+..-++- ++++.|...           .+
T Consensus        45 ~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t--~~~idR~~E~~~~~~l~~~gl~P~~~~~~~~g-----------~v  111 (344)
T PLN02236         45 KGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV--ELFFDRDDEIRTFECMSRHGQGPRLLGRFPNG-----------RV  111 (344)
T ss_pred             CCcccceeEEEEeCCCCCCCCCeEEEEEccCCC--CeeechHHHHHHHHHHHHcCCCCceEEEECCc-----------eE
Confidence            467778899987432    34679999886432  1222236789888888644333 445543211           35


Q ss_pred             eccccCCCHHHH-----------------hcccCCCccc-cCCHHHHHHHHHHHH-----------------HHHHH---
Q 019481           79 KWLMQKKGLENV-----------------HIGEHPASVR-QLRRAERLEIVTKMC-----------------QDLAF---  120 (340)
Q Consensus        79 ~e~~~~gsL~~~-----------------l~~~~~~~~~-~l~~~~~~~i~~qi~-----------------~~L~y---  120 (340)
                      .+|+++.+|...                 ++........ ...+..+..+..++.                 ..+..   
T Consensus       112 ~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~  191 (344)
T PLN02236        112 EEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEK  191 (344)
T ss_pred             EEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHH
Confidence            666665444311                 1121110000 112233333332221                 11111   


Q ss_pred             -hhc--CCCceecCCCCCCcEEecC-CCceEEecccccee
Q 019481          121 -LHS--SEKQVIYRDFKAPNILLDE-TFKCNLSDFSTAKV  156 (340)
Q Consensus       121 -LH~--~~~~iiHrDlKp~NILl~~-~~~~kl~DFGla~~  156 (340)
                       +..  ....++|+|+++.|||+++ ++.+.++||..|..
T Consensus       192 ~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~  231 (344)
T PLN02236        192 ELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY  231 (344)
T ss_pred             HhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence             111  1246899999999999986 57899999998753

>PRK10593 hypothetical protein; Provisional

Probab=97.41  E-value=0.0026  Score=56.43  Aligned_cols=75  Identities=7%  Similarity=-0.106  Sum_probs=47.6

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCC---CccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFH---PNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~h---pnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ++|..+.||+....+ + .+.+|+.+.   ......+.+|.+.|+.+.-   -.+.+++++....    ...+..+++||
T Consensus        23 ~~G~~~~vy~~~~~~-~-~~~~k~~~~---~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~----~~~g~~~LVmE   93 (297)
T PRK10593         23 SEQPYAALWALYDSQ-G-NPMPLMARS---FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHE----QSPGPDVLLLE   93 (297)
T ss_pred             CCccceeEEEEEcCC-C-CEEEEEecc---cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccC----CcCCCeEEEEe
Confidence            578889999986533 2 477788542   1123568899999988853   2455666532211    12235679999


Q ss_pred             cccCCCH
Q 019481           81 LMQKKGL   87 (340)
Q Consensus        81 ~~~~gsL   87 (340)
                      +++|+++
T Consensus        94 ~i~G~~~  100 (297)
T PRK10593         94 RLRGVSV  100 (297)
T ss_pred             ccCCEec
Confidence            9988654

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.36  E-value=0.0037  Score=55.79  Aligned_cols=145  Identities=15%  Similarity=-0.009  Sum_probs=75.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCc--cccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPN--QVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpn--Iv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      +|.-..+|++.. .++ .+++|+.....   ..+.+..|.+++..|...+  +.+.+..-. +..+....+..+.+++|+
T Consensus        32 ~G~~n~~y~v~t-~~~-~~vLK~~~~~~---~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~-g~~~~~~~g~~~~l~e~i  105 (307)
T TIGR00938        32 EGVENSNYLLTT-DVG-RYILTLYEKRV---KAEELPFFLALTTHLAARGLPVPKPVKSRD-GRQLSTLAGKPACLVEFL  105 (307)
T ss_pred             CccccceEEEEe-CCC-cEEEEEecCCC---CHHHHHHHHHHHHHHHHCCCCCCccccCCC-CCeehhcCCeEEEEEEeC
Confidence            444568998864 233 57888875322   1234566777777774322  334433111 111112234567889998


Q ss_pred             cCCCHH-----------HH---hcccCCC---cc-c--cC-CHHHH--H----------HHHHHHHHHHHHhhc-----C
Q 019481           83 QKKGLE-----------NV---HIGEHPA---SV-R--QL-RRAER--L----------EIVTKMCQDLAFLHS-----S  124 (340)
Q Consensus        83 ~~gsL~-----------~~---l~~~~~~---~~-~--~l-~~~~~--~----------~i~~qi~~~L~yLH~-----~  124 (340)
                      +|.++.           ..   ++.....   .. .  .. .|...  .          .....+...++++..     .
T Consensus       106 ~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~  185 (307)
T TIGR00938       106 QGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPRDL  185 (307)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhhcC
Confidence            874431           11   1111000   00 0  00 01100  0          011123334544432     2


Q ss_pred             CCceecCCCCCCcEEecCCCceEEeccccce
Q 019481          125 EKQVIYRDFKAPNILLDETFKCNLSDFSTAK  155 (340)
Q Consensus       125 ~~~iiHrDlKp~NILl~~~~~~kl~DFGla~  155 (340)
                      ..+++|+|+.+.||+++.++...|+||+.+.
T Consensus       186 ~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       186 PRGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             CCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence            3679999999999999988877899999874

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=97.35  E-value=0.0023  Score=56.15  Aligned_cols=32  Identities=31%  Similarity=0.503  Sum_probs=26.6

Q ss_pred             CceecCCCCCCcEEecCCCc-eEEeccccceee
Q 019481          126 KQVIYRDFKAPNILLDETFK-CNLSDFSTAKVS  157 (340)
Q Consensus       126 ~~iiHrDlKp~NILl~~~~~-~kl~DFGla~~~  157 (340)
                      ..++|+|+.|.|||++.+++ .-|+||+.+..-
T Consensus       185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iG  217 (276)
T cd05152         185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKVG  217 (276)
T ss_pred             CeeEeCCCCCCcEEEeCCCCEEEEECcHhcccC
Confidence            45899999999999997565 469999998654

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.17  E-value=0.0021  Score=53.06  Aligned_cols=123  Identities=20%  Similarity=0.196  Sum_probs=74.5

Q ss_pred             CCcc-eEEEEEEcCCCCceEEEEEeec---cCc----------h-------hhHHHHHHHHHHhhhcC---CCcc--ccc
Q 019481            5 APSF-SVLIHVPFPDDRDDVMLKLHEL---ITP----------L-------QLRRDDDGKLDSLEEIF---HPNQ--VKP   58 (340)
Q Consensus         5 ~G~f-g~V~~~~~~~~~~~vAiK~~~~---~~~----------~-------~~~~~~~~E~~~l~~l~---hpnI--v~l   58 (340)
                      .|.- |.||++..  +|+.+|+|+...   ...          .       .....|..|++...+|+   +.++  |++
T Consensus        47 ~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~e~~~Avkc  124 (207)
T PF13095_consen   47 HGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGREGLWAVKC  124 (207)
T ss_pred             CCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccccCceEEEe
Confidence            3555 99999985  567999999331   000          0       11234778998877775   5566  899


Q ss_pred             ccccccc----cc-------ccCCcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCc
Q 019481           59 SGYWSMN----IC-------LTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQ  127 (340)
Q Consensus        59 ~~~f~~~----~~-------~~~~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~  127 (340)
                      +||+.=.    ..       -....-...+|.||.+...                  .....=+.+|.+-+..+|.  .+
T Consensus       125 ~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------------~~~~~~~~~~~~dl~~~~k--~g  184 (207)
T PF13095_consen  125 HGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------------PLQIRDIPQMLRDLKILHK--LG  184 (207)
T ss_pred             eEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------------ccchhHHHHHHHHHHHHHH--CC
Confidence            9966211    00       0000001122333332211                  1233345677788899999  66


Q ss_pred             eecCCCCCCcEEecCCCceEEeccccc
Q 019481          128 VIYRDFKAPNILLDETFKCNLSDFSTA  154 (340)
Q Consensus       128 iiHrDlKp~NILl~~~~~~kl~DFGla  154 (340)
                      |+=+|+|+.|..     .-||+|||.+
T Consensus       185 I~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  185 IVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             eeeccCcccccc-----CCEEEecccC
Confidence            999999999986     4489999864

>PRK05231 homoserine kinase; Provisional

Probab=97.07  E-value=0.01  Score=53.22  Aligned_cols=30  Identities=27%  Similarity=0.288  Sum_probs=25.9

Q ss_pred             CceecCCCCCCcEEecCCCceEEeccccce
Q 019481          126 KQVIYRDFKAPNILLDETFKCNLSDFSTAK  155 (340)
Q Consensus       126 ~~iiHrDlKp~NILl~~~~~~kl~DFGla~  155 (340)
                      .+++|+|+.|.||+++.+...-|+||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             cccCCCCCCCCcEEEECCceEEEEeccccc
Confidence            579999999999999866556899999874

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=96.98  E-value=0.0051  Score=55.52  Aligned_cols=30  Identities=23%  Similarity=0.267  Sum_probs=26.0

Q ss_pred             ceecCCCCCCcEEecC-CCceEEecccccee
Q 019481          127 QVIYRDFKAPNILLDE-TFKCNLSDFSTAKV  156 (340)
Q Consensus       127 ~iiHrDlKp~NILl~~-~~~~kl~DFGla~~  156 (340)
                      ..+|.|+-+.|||+++ ++.++++||..|..
T Consensus       183 v~CHnDl~~~NiL~~~~~~~l~lID~EYag~  213 (330)
T PLN02421        183 VFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY  213 (330)
T ss_pred             EEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence            4799999999999975 57899999998853

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=96.76  E-value=0.018  Score=51.77  Aligned_cols=135  Identities=13%  Similarity=0.083  Sum_probs=88.6

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc----Cch-----------------hhH----HHHHHHHHHhhhcCCCccccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI----TPL-----------------QLR----RDDDGKLDSLEEIFHPNQVKP   58 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~----~~~-----------------~~~----~~~~~E~~~l~~l~hpnIv~l   58 (340)
                      |.|.-+-||.|+.. +|..+|||+++..    .+.                 ...    --...|++.|+++....|.--
T Consensus       153 STGKEANVYHat~~-dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGIP~P  231 (520)
T KOG2270|consen  153 STGKEANVYHATEE-DGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGIPCP  231 (520)
T ss_pred             ccCccceeEeeecC-CCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence            56777889999875 4566999998730    000                 001    113567888888875443211


Q ss_pred             cccccccccccCCcceeeeeeccccCCC-HHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhc-CCCceecCCCCCC
Q 019481           59 SGYWSMNICLTGDRRYCWKNKWLMQKKG-LENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHS-SEKQVIYRDFKAP  136 (340)
Q Consensus        59 ~~~f~~~~~~~~~~~~~~~~~e~~~~gs-L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~~~iiHrDlKp~  136 (340)
                      --..         -..-.+||+|+.+-. -.-.|+..      .++...+..+-.|++.-+.-|-+ |.  .||.||.=-
T Consensus       232 ePIl---------Lk~hVLVM~FlGrdgw~aPkLKd~------~ls~~ka~~~Y~~~v~~MR~lY~~c~--LVHADLSEf  294 (520)
T KOG2270|consen  232 EPIL---------LKNHVLVMEFLGRDGWAAPKLKDA------SLSTSKARELYQQCVRIMRRLYQKCR--LVHADLSEF  294 (520)
T ss_pred             Ccee---------eecceEeeeeccCCCCcCcccccc------cCChHHHHHHHHHHHHHHHHHHHHhc--eeccchhhh
Confidence            1100         002348999984311 22233332      37777888888888888888766 88  999999999


Q ss_pred             cEEecCCCceEEeccccceee
Q 019481          137 NILLDETFKCNLSDFSTAKVS  157 (340)
Q Consensus       137 NILl~~~~~~kl~DFGla~~~  157 (340)
                      |+|+ .+|.+.|+|-+-+...
T Consensus       295 N~Ly-hdG~lyiIDVSQSVE~  314 (520)
T KOG2270|consen  295 NLLY-HDGKLYIIDVSQSVEH  314 (520)
T ss_pred             hheE-ECCEEEEEEccccccC
Confidence            9998 6789999999887543

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=96.75  E-value=0.023  Score=50.58  Aligned_cols=33  Identities=15%  Similarity=0.340  Sum_probs=29.1

Q ss_pred             CceecCCCCCCcEEecCCCceEEeccccceeec
Q 019481          126 KQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus       126 ~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      ..++|+|+.+.|++++.++.+=+.||+++..-.
T Consensus       198 ~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGD  230 (321)
T COG3173         198 PVLVHGDYRPGNLIIDPGRPTGVLDWELATLGD  230 (321)
T ss_pred             ceeeeCCcccCCEEEeCCCeeEEEeccccccCC
Confidence            379999999999999998889999999986543

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=96.73  E-value=0.0052  Score=55.81  Aligned_cols=121  Identities=15%  Similarity=0.124  Sum_probs=79.8

Q ss_pred             eeeeeccccCC-CHHHHhcccCC-CccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccc
Q 019481           75 CWKNKWLMQKK-GLENVHIGEHP-ASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFS  152 (340)
Q Consensus        75 ~~~~~e~~~~g-sL~~~l~~~~~-~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFG  152 (340)
                      .-+.|..++|. -...+.+...+ ......+|....+.++.++.+.+-||.  .|-.-+|+.++|+|+.+++.+.|.|=.
T Consensus        85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~--~Gh~vGDVn~~~~lVsd~~~V~LVdsD  162 (637)
T COG4248          85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE--HGHVVGDVNQNSFLVSDDSKVVLVDSD  162 (637)
T ss_pred             eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh--cCCcccccCccceeeecCceEEEEccc
Confidence            44556655543 23333322111 012348899999999999999999999  669999999999999999999998855


Q ss_pred             cceeecccCCcceeeccceeeccC----------------ccccchhhhhHhHhCCccccc
Q 019481          153 TAKVSAVENADLTALDTSSVSAQS----------------GKTGMEMKMAQLESGGWRAHD  197 (340)
Q Consensus       153 la~~~~~~~~~~~~~gt~~~~~p~----------------~~~~~~~~~~~~~s~g~~~~~  197 (340)
                      .-..-..+....--.|.+.|.+||                |..|..+...+++-+|.-.|.
T Consensus       163 sfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPys  223 (637)
T COG4248         163 SFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYS  223 (637)
T ss_pred             ceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCC
Confidence            433322222222234666666663                556777777777776555543

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=96.36  E-value=0.0078  Score=53.86  Aligned_cols=74  Identities=19%  Similarity=0.187  Sum_probs=53.6

Q ss_pred             CcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEec
Q 019481           71 DRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSD  150 (340)
Q Consensus        71 ~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~D  150 (340)
                      +..|.|+++++- |+++. .++.        -.++++..++.+-+.-+.-+.. +-..-|||+.-.||||+ +|++.|+|
T Consensus       297 e~~y~yl~~kdh-gt~is-~ik~--------~~~~e~lsff~s~~sil~~lek-kf~fehrnlt~~niLId-~GnvtLID  364 (488)
T COG5072         297 ETLYLYLHFKDH-GTPIS-IIKA--------DRSEEELSFFWSCISILDILEK-KFPFEHRNLTLDNILID-EGNVTLID  364 (488)
T ss_pred             CceEEEEEEecC-Cceee-eeec--------ccHHHHHHHHHHHHHHHhhhhh-cCCcccccccccceeee-cCceEEEE
Confidence            344666777664 44443 2222        4567888888887766666654 24589999999999999 99999999


Q ss_pred             ccccee
Q 019481          151 FSTAKV  156 (340)
Q Consensus       151 FGla~~  156 (340)
                      |-++|.
T Consensus       365 fklsRl  370 (488)
T COG5072         365 FKLSRL  370 (488)
T ss_pred             eeeeec
Confidence            999984

>PRK06148 hypothetical protein; Provisional

Probab=96.29  E-value=0.093  Score=54.61  Aligned_cols=31  Identities=39%  Similarity=0.414  Sum_probs=26.1

Q ss_pred             CCceecCCCCCCcEEecCCC--ceE-Eeccccce
Q 019481          125 EKQVIYRDFKAPNILLDETF--KCN-LSDFSTAK  155 (340)
Q Consensus       125 ~~~iiHrDlKp~NILl~~~~--~~k-l~DFGla~  155 (340)
                      ..++||.|+.+.|||++.++  ++. |+|||-+.
T Consensus       202 p~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~  235 (1013)
T PRK06148        202 PAQVIHNDANDYNILVDADDGERISGLIDFGDAV  235 (1013)
T ss_pred             CcceECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence            35699999999999999875  565 99999764

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=96.25  E-value=0.013  Score=51.76  Aligned_cols=125  Identities=18%  Similarity=0.166  Sum_probs=78.6

Q ss_pred             CcceEEEEEEcCCCCceEEEEEeeccCc-------h----------hh----HHHHHHHHHHhhhcC-CC-ccccccccc
Q 019481            6 PSFSVLIHVPFPDDRDDVMLKLHELITP-------L----------QL----RRDDDGKLDSLEEIF-HP-NQVKPSGYW   62 (340)
Q Consensus         6 G~fg~V~~~~~~~~~~~vAiK~~~~~~~-------~----------~~----~~~~~~E~~~l~~l~-hp-nIv~l~~~f   62 (340)
                      |.-+.||.+-+. .|+..++|+.+....       +          .+    .-...+|...|+.|. |. -+.+.++  
T Consensus       103 GKESDIY~v~d~-~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfpVPkpiD--  179 (465)
T KOG2268|consen  103 GKESDIYVVADE-EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFPVPKPID--  179 (465)
T ss_pred             ccccceEEEecC-CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCCCCCccc--
Confidence            444679999875 456789998764110       0          01    112457888888885 32 2334444  


Q ss_pred             cccccccCCcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC
Q 019481           63 SMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE  142 (340)
Q Consensus        63 ~~~~~~~~~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~  142 (340)
                               .+.-.++||++.|-.|.+.-+-..        ..   .+...+..-+.-|-.  .|+||+|..-=||++++
T Consensus       180 ---------~~RH~Vvmelv~g~Pl~~v~~v~d--------~~---~ly~~lm~~Iv~la~--~GlIHgDFNEFNimv~d  237 (465)
T KOG2268|consen  180 ---------HNRHCVVMELVDGYPLRQVRHVED--------PP---TLYDDLMGLIVRLAN--HGLIHGDFNEFNIMVKD  237 (465)
T ss_pred             ---------ccceeeHHHhhcccceeeeeecCC--------hH---HHHHHHHHHHHHHHH--cCceecccchheeEEec
Confidence                     112337899998877766543322        12   222333333444555  77999999999999999


Q ss_pred             CCceEEeccccce
Q 019481          143 TFKCNLSDFSTAK  155 (340)
Q Consensus       143 ~~~~kl~DFGla~  155 (340)
                      ++.++++||--..
T Consensus       238 d~~i~vIDFPQmv  250 (465)
T KOG2268|consen  238 DDKIVVIDFPQMV  250 (465)
T ss_pred             CCCEEEeechHhh
Confidence            9999999997543

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=96.16  E-value=0.078  Score=48.01  Aligned_cols=72  Identities=8%  Similarity=-0.083  Sum_probs=45.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeec--c----CchhhHHHHHHHHHHhhhcC--CC-ccccccccccccccccCCcce
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHEL--I----TPLQLRRDDDGKLDSLEEIF--HP-NQVKPSGYWSMNICLTGDRRY   74 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~--~----~~~~~~~~~~~E~~~l~~l~--hp-nIv~l~~~f~~~~~~~~~~~~   74 (340)
                      ++|-...||++.+..+++.|+||.-..  .    ...-..++...|.+.|+...  -| .+.++|.+         |+..
T Consensus         4 gdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~---------D~e~   74 (370)
T TIGR01767         4 GDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF---------DTEM   74 (370)
T ss_pred             CCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE---------cccc
Confidence            356678899999865557899998542  1    11233455667888887764  34 45556552         4445


Q ss_pred             eeeeeccccC
Q 019481           75 CWKNKWLMQK   84 (340)
Q Consensus        75 ~~~~~e~~~~   84 (340)
                      +.++||+++.
T Consensus        75 ~~~vMEdL~~   84 (370)
T TIGR01767        75 AVTVMEDLSH   84 (370)
T ss_pred             ceehHhhCcc
Confidence            6688887643

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PTZ00384 choline kinase; Provisional

Probab=96.02  E-value=0.033  Score=51.23  Aligned_cols=29  Identities=24%  Similarity=0.054  Sum_probs=24.2

Q ss_pred             CceecCCCCCCcEEecCCCceEEeccccce
Q 019481          126 KQVIYRDFKAPNILLDETFKCNLSDFSTAK  155 (340)
Q Consensus       126 ~~iiHrDlKp~NILl~~~~~~kl~DFGla~  155 (340)
                      ...+|.|+-+.||+.+. +.+.++||-.|.
T Consensus       227 ~VfCHNDL~~gNIL~~~-~~l~lID~EYA~  255 (383)
T PTZ00384        227 VLFCHNDLFFTNILDFN-QGIYFIDFDFAG  255 (383)
T ss_pred             eeeeeccCCcccEEecC-CCEEEEEecccc
Confidence            45799999999999754 569999998874

>PTZ00296 choline kinase; Provisional

Probab=95.76  E-value=0.06  Score=50.51  Aligned_cols=29  Identities=21%  Similarity=0.204  Sum_probs=24.5

Q ss_pred             CceecCCCCCCcEEecCCCceEEeccccce
Q 019481          126 KQVIYRDFKAPNILLDETFKCNLSDFSTAK  155 (340)
Q Consensus       126 ~~iiHrDlKp~NILl~~~~~~kl~DFGla~  155 (340)
                      ...+|.|+-+.|||.+.+ .++++||-.|.
T Consensus       284 ~VfCHNDl~~~NiL~~~~-~l~LIDfEYAg  312 (442)
T PTZ00296        284 IVFCHNDLQENNIINTNK-CLRLIDFEYSG  312 (442)
T ss_pred             eeEEeCCCCccceeecCC-CEEEEeecccc
Confidence            468999999999988654 49999998874

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=95.70  E-value=0.048  Score=47.61  Aligned_cols=49  Identities=16%  Similarity=0.152  Sum_probs=37.3

Q ss_pred             HHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481          108 LEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus       108 ~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      ...+..+-.++.-.|.-..-++|.|+.|+|+|.+..+.++|+||-.|..
T Consensus       135 ~~~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~  183 (269)
T COG0510         135 RKKLKELRRALEEVPKDDLVPCHNDLNPGNLLLTDKGGLFLIDWEYAGL  183 (269)
T ss_pred             HHHHHHHHHHhhhcCCCceeeecCCCCccceEEcCCCcEEEEecccCCC
Confidence            3355555556666665112599999999999999999999999988754

>PRK11768 serine/threonine protein kinase; Provisional

Probab=95.60  E-value=0.21  Score=44.92  Aligned_cols=28  Identities=21%  Similarity=0.218  Sum_probs=24.1

Q ss_pred             CceecCCCCCCcEEecCCCceEEeccccce
Q 019481          126 KQVIYRDFKAPNILLDETFKCNLSDFSTAK  155 (340)
Q Consensus       126 ~~iiHrDlKp~NILl~~~~~~kl~DFGla~  155 (340)
                      .+++|+|+.+.|||++ + .+.|+||+-+.
T Consensus       196 ~~liHgD~h~~NvL~~-d-~~~iIDFDd~~  223 (325)
T PRK11768        196 LLRLHGDCHPGNILWR-D-GPHFVDLDDAR  223 (325)
T ss_pred             ccceecCCCchhcccc-C-CcEEEeCCCCC
Confidence            5689999999999995 4 57899999874

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=95.60  E-value=0.077  Score=46.77  Aligned_cols=69  Identities=10%  Similarity=0.046  Sum_probs=39.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC---CCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF---HPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ++|....+|+..  .+++.+-+|+-.    ......+..|.+-|+.|.   --.+.+.+++-..       .+..++++|
T Consensus        26 ~GG~i~~a~~~~--~~~~~~FvK~~~----~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~-------~~~~fLlle   92 (288)
T PF03881_consen   26 SGGDINEAYRLD--TDGGSYFVKVNS----ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEY-------DDDAFLLLE   92 (288)
T ss_dssp             --SSSSEEEEEE--TTS-EEEEEEEE----GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE--------SSCCEEEEE
T ss_pred             CCCChhheEEEE--CCCccEEEEecC----hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEee-------cCCceEEEE
Confidence            467788999887  567789999985    233456788888888884   2345566663321       224478999


Q ss_pred             cccCC
Q 019481           81 LMQKK   85 (340)
Q Consensus        81 ~~~~g   85 (340)
                      |++.+
T Consensus        93 ~l~~~   97 (288)
T PF03881_consen   93 FLEMG   97 (288)
T ss_dssp             -----
T ss_pred             eecCC
Confidence            88765

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PRK10271 thiK thiamine kinase; Provisional

Probab=95.05  E-value=0.019  Score=46.96  Aligned_cols=31  Identities=19%  Similarity=0.117  Sum_probs=26.7

Q ss_pred             CceecCCCCCCcEEecCCCceEEeccccceee
Q 019481          126 KQVIYRDFKAPNILLDETFKCNLSDFSTAKVS  157 (340)
Q Consensus       126 ~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~  157 (340)
                      ...+|+|+.|.||+++.++ ++++||+.|...
T Consensus        77 ~~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~g  107 (188)
T PRK10271         77 LAPLHMDVHAGNLVHSASG-LRLIDWEYAGDG  107 (188)
T ss_pred             eeeecCCCCCccEEEECCC-EEEEeCCcccCC
Confidence            4579999999999998777 999999998643

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=94.90  E-value=0.028  Score=46.97  Aligned_cols=39  Identities=26%  Similarity=0.249  Sum_probs=34.3

Q ss_pred             HHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccc
Q 019481          115 CQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFST  153 (340)
Q Consensus       115 ~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl  153 (340)
                      +++|.-.|+...+.+|+|-.|+||+-|..|.+||.|=+.
T Consensus       151 i~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKlVDP~~  189 (308)
T PF07387_consen  151 IKDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKLVDPVC  189 (308)
T ss_pred             HHHHHHhhccCCCeecCCCChhheeecCCCCEEecChhh
Confidence            567888897447799999999999999999999999875

The function of this family is unknown.

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=94.75  E-value=0.064  Score=47.85  Aligned_cols=29  Identities=24%  Similarity=0.377  Sum_probs=25.6

Q ss_pred             CceecCCCCCCcEEecCCCceEEeccccce
Q 019481          126 KQVIYRDFKAPNILLDETFKCNLSDFSTAK  155 (340)
Q Consensus       126 ~~iiHrDlKp~NILl~~~~~~kl~DFGla~  155 (340)
                      .+++|+|+.+.||+++. +.+.|+||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence            56999999999999987 678999999764

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=94.54  E-value=0.013  Score=61.53  Aligned_cols=112  Identities=11%  Similarity=-0.011  Sum_probs=79.7

Q ss_pred             HHHHHHHHHhhhcCCCcccccccccccccccc-CCcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHH
Q 019481           38 RDDDGKLDSLEEIFHPNQVKPSGYWSMNICLT-GDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQ  116 (340)
Q Consensus        38 ~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~-~~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~  116 (340)
                      +....|.+.++...|+++...+.      .+. .....-|..++++.+|.+++.|-+.... ...+++.-+.....+...
T Consensus      1274 emll~e~de~~~~~h~~~~~~p~------rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee-~~~ld~~~v~~~~kvsvl 1346 (2724)
T KOG1826|consen 1274 EMLLSERDELREAKHYLTEVDPL------RIPPSESTEEYIRSLYVEFGKLFSIIIKGLEE-SPDLDRSPVHLRHKVSVL 1346 (2724)
T ss_pred             Hhhhhhhhhhhhhhceeeecccc------cCCCCCChHHHHHHHHHHHhHHHHHHHhcccc-CCcchhchHHHHHHHHHh
Confidence            44455666667788999988776      122 2233456788899999999998765431 233454444444455467


Q ss_pred             HHHHhhc---CCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481          117 DLAFLHS---SEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus       117 ~L~yLH~---~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      +..-+|+   .++-.+|+++|+-|.+|+.+.++|++++|+.+.
T Consensus      1347 ~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKI 1389 (2724)
T KOG1826|consen 1347 NRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKI 1389 (2724)
T ss_pred             ccchhhhcccCCccchhhhhhhhccceecCCcccccccccccc
Confidence            7777776   345678999999999999999999999999984

>PHA03111 Ser/Thr kinase; Provisional

Probab=94.51  E-value=0.045  Score=48.49  Aligned_cols=37  Identities=16%  Similarity=0.062  Sum_probs=25.4

Q ss_pred             HHHHHHHHHHHHHHHhhc--CCCceecCCCCCCcEEecC
Q 019481          106 ERLEIVTKMCQDLAFLHS--SEKQVIYRDFKAPNILLDE  142 (340)
Q Consensus       106 ~~~~i~~qi~~~L~yLH~--~~~~iiHrDlKp~NILl~~  142 (340)
                      -++.++.||+--.-.+-.  +-.+.+|-||||+|||+-.
T Consensus       280 YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFd  318 (444)
T PHA03111        280 YIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFD  318 (444)
T ss_pred             HHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEec
Confidence            466778888654423322  1256999999999999943

>PRK12396 5-methylribose kinase; Reviewed

Probab=94.48  E-value=0.39  Score=44.19  Aligned_cols=71  Identities=11%  Similarity=-0.153  Sum_probs=45.9

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeec--c---CchhhHHHHHHHHHHhhhcC--CC-ccccccccccccccccCCccee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHEL--I---TPLQLRRDDDGKLDSLEEIF--HP-NQVKPSGYWSMNICLTGDRRYC   75 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~--~---~~~~~~~~~~~E~~~l~~l~--hp-nIv~l~~~f~~~~~~~~~~~~~   75 (340)
                      ++|--..||++.+..+++.|+||.-..  .   .-.-..++...|.+.|+...  .| .+.++|.+         |+..+
T Consensus        38 gdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~---------D~e~~  108 (409)
T PRK12396         38 GDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF---------DSVMN  108 (409)
T ss_pred             CCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE---------CcHHh
Confidence            456668899999854456799988542  1   11233566777888888764  34 45566652         44466


Q ss_pred             eeeecccc
Q 019481           76 WKNKWLMQ   83 (340)
Q Consensus        76 ~~~~e~~~   83 (340)
                      .++||+++
T Consensus       109 ~~vMEdL~  116 (409)
T PRK12396        109 CCVMEDLS  116 (409)
T ss_pred             hHHHHhCc
Confidence            68888764

>PLN02756 S-methyl-5-thioribose kinase

Probab=94.31  E-value=0.72  Score=42.67  Aligned_cols=28  Identities=11%  Similarity=0.194  Sum_probs=23.5

Q ss_pred             CceecCCCCCCcEEecCCCceEEeccccc
Q 019481          126 KQVIYRDFKAPNILLDETFKCNLSDFSTA  154 (340)
Q Consensus       126 ~~iiHrDlKp~NILl~~~~~~kl~DFGla  154 (340)
                      ...+|+|+.|.||+++.++ .+++|.-.+
T Consensus       230 ~~L~HGDl~~g~i~~~~~~-~~~id~ef~  257 (418)
T PLN02756        230 QALVHGDLHTGSVMVTPDS-TQVIDPEFA  257 (418)
T ss_pred             cceeecCCCCCcEEEcCCC-ceEecchhh
Confidence            5799999999999998865 788886554

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=94.25  E-value=0.032  Score=46.75  Aligned_cols=31  Identities=26%  Similarity=0.291  Sum_probs=22.1

Q ss_pred             CceecCCCCCCcEEe-cCCCceEEecccccee
Q 019481          126 KQVIYRDFKAPNILL-DETFKCNLSDFSTAKV  156 (340)
Q Consensus       126 ~~iiHrDlKp~NILl-~~~~~~kl~DFGla~~  156 (340)
                      ....|.|+.|.|||+ +.++.++++||..|..
T Consensus       143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  143 LVFCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             ceEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            468899999999999 8899999999998864

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	340
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		3e-05
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		3e-05
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		5e-05
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		9e-05
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		1e-04
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		1e-04
2pl0_A	289	Lck Bound To Imatinib Length = 289		2e-04
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		2e-04
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		2e-04
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		3e-04
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		3e-04
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		3e-04
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		3e-04
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		3e-04
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		3e-04
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		3e-04
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		3e-04
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		3e-04
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		3e-04
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		3e-04
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		3e-04
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		3e-04
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		3e-04
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		5e-04
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		7e-04
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		9e-04
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		9e-04

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 94  EHPASVRQLRRAERLEIVTKMCQDLAFLHS-SEKQVIYRDFKAPNILLDETFKCNLSDFS 152
           E P S   L   +R  I     + LA+LH   + ++I+RD KA NILLDE F+  + DF 
Sbjct: 120 ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 179
Query: 153 TAKV 156
            AK+
Sbjct: 180 LAKL 183

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 94  EHPASVRQLRRAERLEIVTKMCQDLAFLHSS-EKQVIYRDFKAPNILLDETFKCNLSDFS 152
           E P S   L   +R  I     + LA+LH   + ++I+RD KA NILLDE F+  + DF 
Sbjct: 128 ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 187
Query: 153 TAKV 156
            AK+
Sbjct: 188 LAKL 191

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Query: 108 LEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTA 166
           L++  ++ + +AF+   E+  I+RD +A NIL+ +T  C ++DF  A++  +E+A+ TA
Sbjct: 112 LDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDAEXTA 166

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 18/65 (27%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 95  HPASVR-QLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFST 153
           H +  R QL    RL +   + + + +LH+    +++RD K+PN+L+D+ +   + DF  
Sbjct: 126 HKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGL 185
Query: 154 AKVSA 158
           +++ A
Sbjct: 186 SRLKA 190

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 77  KNKWLMQKKGLENVHIGEH----PASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRD 132
           +N+ ++  K +EN ++  H          +   +RLEI     + L +LH+  + +I+RD
Sbjct: 107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT--RAIIHRD 164
Query: 133 FKAPNILLDETFKCNLSDFSTAK 155
            K+ NILLDE F   ++DF  +K
Sbjct: 165 VKSINILLDENFVPKITDFGISK 187

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 77  KNKWLMQKKGLENVHIGEH----PASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRD 132
           +N+ ++  K +EN ++  H          +   +RLEI     + L +LH+  + +I+RD
Sbjct: 107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT--RAIIHRD 164
Query: 133 FKAPNILLDETFKCNLSDFSTAK 155
            K+ NILLDE F   ++DF  +K
Sbjct: 165 VKSINILLDENFVPKITDFGISK 187

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 108 LEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTA 166
           L++  ++ + +AF+   E+  I+RD +A NIL+ +T  C ++DF  A++  +E+ + TA
Sbjct: 122 LDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTA 176

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 108 LEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTA 166
           L++  ++ + +AF+   E+  I+RD +A NIL+ +T  C ++DF  A++  +E+ + TA
Sbjct: 120 LDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTA 174

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 108 LEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTA 166
           L++  ++ + +AF+   E+  I+RD +A NIL+ +T  C ++DF  A++  +E+ + TA
Sbjct: 118 LDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTA 172

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 108 LEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTA 166
           L++  ++ + +AF+   E+  I+RD +A NIL+ +T  C ++DF  A++  +E+ + TA
Sbjct: 112 LDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTA 166

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 108 LEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTA 166
           L++  ++ + +AF+   E+  I+RD +A NIL+ +T  C ++DF  A++  +E+ + TA
Sbjct: 121 LDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTA 175

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 108 LEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTA 166
           L++  ++ + +AF+   E+  I+RD +A NIL+ +T  C ++DF  A++  +E+ + TA
Sbjct: 118 LDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTA 172

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 108 LEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTA 166
           L++  ++ + +AF+   E+  I+RD +A NIL+ +T  C ++DF  A++  +E+ + TA
Sbjct: 112 LDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTA 166

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 108 LEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTA 166
           L++  ++ + +AF+   E+  I+RD +A NIL+ +T  C ++DF  A++  +E+ + TA
Sbjct: 117 LDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTA 171

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 108 LEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTA 166
           L++  ++ + +AF+   E+  I+RD +A NIL+ +T  C ++DF  A++  +E+ + TA
Sbjct: 107 LDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTA 161

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 108 LEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTA 166
           L++  ++ + +AF+   E+  I+RD +A NIL+ +T  C ++DF  A++  +E+ + TA
Sbjct: 114 LDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTA 168

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 108 LEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTA 166
           L++  ++ + +AF+   E+  I+RD +A NIL+ +T  C ++DF  A++  +E+ + TA
Sbjct: 112 LDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTA 166

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 108 LEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTA 166
           L++  ++ + +AF+   E+  I+RD +A NIL+ +T  C ++DF  A++  +E+ + TA
Sbjct: 113 LDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTA 167

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVS 157
           R +I       + FLH  E   I+RD K+ NILLDE F   +SDF  A+ S
Sbjct: 126 RCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARAS 174

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVS 157
           R +I       + FLH  E   I+RD K+ NILLDE F   +SDF  A+ S
Sbjct: 129 RCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARAS 177

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVS 157
           R +I       + FLH  E   I+RD K+ NILLDE F   +SDF  A+ S
Sbjct: 135 RCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARAS 183

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/65 (26%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 95  HPASVR-QLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFST 153
           H +  R QL    RL +   + + + +LH+    +++R+ K+PN+L+D+ +   + DF  
Sbjct: 126 HKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGL 185
Query: 154 AKVSA 158
           +++ A
Sbjct: 186 SRLKA 190

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVS 157
           R +I       + FLH  E   I+RD K+ NILLDE F   +SDF  A+ S
Sbjct: 135 RCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARAS 183

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 14/115 (12%)
Query: 47  LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
           L+++ HPN ++  G +           YC     L     L  VH        + L+  E
Sbjct: 108 LQKLRHPNTIQYRGCYLREHTAWLVMEYC-----LGSASDLLEVH-------KKPLQEVE 155
Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN 161
              +     Q LA+LHS    +I+RD KA NILL E     L DF +A + A  N
Sbjct: 156 IAAVTHGALQGLAYLHS--HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 208

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 14/115 (12%)
Query: 47  LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
           L+++ HPN ++  G +           YC     L     L  VH        + L+  E
Sbjct: 69  LQKLRHPNTIQYRGCYLREHTAWLVMEYC-----LGSASDLLEVH-------KKPLQEVE 116
Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN 161
              +     Q LA+LHS    +I+RD KA NILL E     L DF +A + A  N
Sbjct: 117 IAAVTHGALQGLAYLHSH--NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 169

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 8/60 (13%)
Query: 102 LRRAERLE------IVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           LR+++R           ++C  L +LHS  K +IYRD K  NILLD+     ++DF  AK
Sbjct: 97  LRKSQRFPNPVAKFYAAEVCLALEYLHS--KDIIYRDLKPENILLDKNGHIKITDFGFAK 154

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 18/59 (30%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 108 LEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTA 166
           L++  ++ + +AF+   E+  I+R+ +A NIL+ +T  C ++DF  A++  +E+ + TA
Sbjct: 108 LDMAAQIAEGMAFIE--ERNYIHRNLRAANILVSDTLSCKIADFGLARL--IEDNEYTA 162

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	340
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	6e-14
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	3e-12
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	4e-11
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-08
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-07
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-07
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	4e-07
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	6e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-07
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-06
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-06
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-06
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	6e-06
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	7e-06
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	7e-06
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	9e-06
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	9e-06
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	9e-06
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-05
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-05
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	1e-05
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-05
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	1e-05
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-05
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	1e-05
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	3e-05
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	3e-05
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	3e-05
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	3e-05
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	4e-05
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	4e-05
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	4e-05
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	5e-05
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	6e-05
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	8e-05
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-04
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-04
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-04
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-04
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	1e-04
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-04
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-04
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-04
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-04
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-04
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-04
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	3e-04
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	3e-04
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-04
2a19_B	284	Interferon-induced, double-stranded RNA-activated	4e-04
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	4e-04
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	4e-04
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	4e-04
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	4e-04
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	4e-04
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	5e-04
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	5e-04
2dyl_A	318	Dual specificity mitogen-activated protein kinase	5e-04
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	5e-04
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	5e-04
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	6e-04
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	6e-04
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	6e-04
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	6e-04
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	6e-04
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	7e-04
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	7e-04
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	8e-04

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 70.3 bits (173), Expect = 6e-14
 Identities = 31/109 (28%), Positives = 41/109 (37%), Gaps = 21/109 (19%)

Query: 52  HPNQVKPSGYWSMNICLTGDRR-----YCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
           H N V+  G+        GD       Y       M    L +  +         L    
Sbjct: 89  HENLVELLGF-----SSDGDDLCLVYVY-------MPNGSLLD-RLSC-LDGTPPLSWHM 134

Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           R +I       + FLH  E   I+RD K+ NILLDE F   +SDF  A+
Sbjct: 135 RCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLAR 181

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 65.7 bits (161), Expect = 3e-12
 Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 20/115 (17%)

Query: 52  HPNQVKPSGYWSMNICLTGDRR-----YCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
           HP+ V   G+     C   +       Y       M+   L+  H+         +   +
Sbjct: 94  HPHLVSLIGF-----CDERNEMILIYKY-------MENGNLKR-HLYGSDLPTMSMSWEQ 140

Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN 161
           RLEI     + L +LH   + +I+RD K+ NILLDE F   ++DF  +K     +
Sbjct: 141 RLEICIGAARGLHYLH--TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELD 193

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 62.2 bits (152), Expect = 4e-11
 Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 19/110 (17%)

Query: 52  HPNQVKPSGYWSMNICLTGDRR-----YCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
           H N ++  G+     C+T   R     Y       M    + +  + E P S   L   +
Sbjct: 86  HRNLLRLRGF-----CMTPTERLLVYPY-------MANGSVAS-CLRERPESQPPLDWPK 132

Query: 107 RLEIVTKMCQDLAFLH-SSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           R  I     + LA+LH   + ++I+RD KA NILLDE F+  + DF  AK
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 182

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 53.5 bits (129), Expect = 2e-08
 Identities = 15/71 (21%), Positives = 36/71 (50%)

Query: 96  PASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
             +  QL    RL +   + + + +LH+    +++R+ K+PN+L+D+ +   + DF  ++
Sbjct: 128 SGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187

Query: 156 VSAVENADLTA 166
           + A       +
Sbjct: 188 LKASTFLSSKS 198

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 10/62 (16%), Positives = 27/62 (43%)

Query: 95  HPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTA 154
           H  +   + +++ ++    M + +AFLH+ E  +      + ++++DE     +S     
Sbjct: 101 HEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVK 160

Query: 155 KV 156
             
Sbjct: 161 FS 162

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 50.9 bits (122), Expect = 2e-07
 Identities = 30/139 (21%), Positives = 49/139 (35%), Gaps = 28/139 (20%)

Query: 46  SLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL----MQKKGLENVHIGEHPASVRQ 101
           SL  + H N ++  G         G       + WL     +K  L +  +  +  S  +
Sbjct: 71  SLPGMKHENILQFIGA-----EKRGTSV--DVDLWLITAFHEKGSLSD-FLKANVVSWNE 122

Query: 102 LRRAERLEIVTKMCQDLAFLHS--------SEKQVIYRDFKAPNILLDETFKCNLSDFST 153
                   I   M + LA+LH          +  + +RD K+ N+LL       ++DF  
Sbjct: 123 -----LCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL 177

Query: 154 AKVSAVENADLTALDTSSV 172
           A       A  +A DT   
Sbjct: 178 AL---KFEAGKSAGDTHGQ 193

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 50.0 bits (120), Expect = 4e-07
 Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 2/59 (3%)

Query: 100 RQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA 158
            +    + ++I  +  + + +LH+  K +I+RD K+ NI L E     + DF  A   +
Sbjct: 115 TKFEMKKLIDIARQTARGMDYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 49.5 bits (118), Expect = 6e-07
 Identities = 13/85 (15%), Positives = 31/85 (36%), Gaps = 7/85 (8%)

Query: 100 RQLRRAERLEIVTKMCQDLAFLHS-------SEKQVIYRDFKAPNILLDETFKCNLSDFS 152
                     +   + + LA+LH+        +  + +RD  + N+L+     C +SDF 
Sbjct: 106 HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165

Query: 153 TAKVSAVENADLTALDTSSVSAQSG 177
            +             + ++  ++ G
Sbjct: 166 LSMRLTGNRLVRPGEEDNAAISEVG 190

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.2 bits (119), Expect = 6e-07
 Identities = 28/183 (15%), Positives = 55/183 (30%), Gaps = 46/183 (25%)

Query: 7   SFSVLIHVPFPDD----------------RDDVMLKLHELITPLQLRRDDDGKLDSLEEI 50
             SV     FP                  + DVM+ +++L     + +       S+  I
Sbjct: 377 RLSV-----FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI 431

Query: 51  FHPNQVKPSGYWSMNICL----TGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
           +   +VK    ++++  +       + +   +            HIG H   ++ +   E
Sbjct: 432 YLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHH---LKNIEHPE 488

Query: 107 RLEIVTKMCQDLAFL-----HSSEKQV-------------IYRDFKAPNILLDETFKCNL 148
           R+ +   +  D  FL     H S                  Y+ +   N    E     +
Sbjct: 489 RMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAI 548

Query: 149 SDF 151
            DF
Sbjct: 549 LDF 551

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 48.2 bits (115), Expect = 2e-06
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 9/70 (12%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDET-FKCNLSDFSTAKVSAVENADLTALDTSSVSAQS 176
           L +LH+  +++++ D KA N+LL     +  L DF  A     +    + L    +    
Sbjct: 163 LEYLHT--RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI---- 216

Query: 177 GKTGMEMKMA 186
              G E  MA
Sbjct: 217 --PGTETHMA 224

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 47.7 bits (113), Expect = 2e-06
 Identities = 18/136 (13%), Positives = 48/136 (35%), Gaps = 14/136 (10%)

Query: 24  MLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSG----YWSMNICLTGDRRYCWKNK 79
           +L+  +     ++        D +++      ++        W ++      R       
Sbjct: 129 LLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSN--- 185

Query: 80  WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNIL 139
            L     +    +  H ++ + L    RL++  ++ + LA LH     +++   +  +I+
Sbjct: 186 -LQTFGEV----LLSHSSTHKSLVHHARLQLTLQVIRLLASLHH--YGLVHTYLRPVDIV 238

Query: 140 LDETFKCNLSDFSTAK 155
           LD+     L+ F    
Sbjct: 239 LDQRGGVFLTGFEHLV 254

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 46.1 bits (110), Expect = 6e-06
 Identities = 13/67 (19%), Positives = 30/67 (44%), Gaps = 7/67 (10%)

Query: 98  SVRQLRRAERL--EIVTKMCQDLA----FLHSS-EKQVIYRDFKAPNILLDETFKCNLSD 150
            + ++   +R+  +I+      +A    +LH      +I+RD K+ NIL+ +  +     
Sbjct: 92  PLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLS 151

Query: 151 FSTAKVS 157
               K++
Sbjct: 152 NKILKIT 158

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 46.2 bits (109), Expect = 7e-06
 Identities = 21/139 (15%), Positives = 37/139 (26%), Gaps = 18/139 (12%)

Query: 23  VMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSG----YWSMNICLTGDRRYCWKN 78
               L E     + RR      D++     P   + S     Y   N  L          
Sbjct: 116 AARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASV--- 172

Query: 79  KWLMQKKGLENV--HIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAP 136
                   LE +   +                 +  ++ +  A L S  K +++  F   
Sbjct: 173 -------DLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQS--KGLVHGHFTPD 223

Query: 137 NILLDETFKCNLSDFSTAK 155
           N+ +    +  L D S   
Sbjct: 224 NLFIMPDGRLMLGDVSALW 242

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 46.2 bits (110), Expect = 7e-06
 Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 13/112 (11%)

Query: 47  LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
           L  + HPN VK  G     +CL  +           +   L NV  G  P        A 
Sbjct: 55  LSRVNHPNIVKLYGACLNPVCLVME---------YAEGGSLYNVLHGAEPLP--YYTAAH 103

Query: 107 RLEIVTKMCQDLAFLHSSE-KQVIYRDFKAPNILLDETFK-CNLSDFSTAKV 156
            +    +  Q +A+LHS + K +I+RD K PN+LL        + DF TA  
Sbjct: 104 AMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD 155

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 45.9 bits (109), Expect = 9e-06
 Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 10/70 (14%)

Query: 113 KMCQD----LAFLHSSEKQ------VIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA 162
           K+       L  LH+          + +RD K+ NIL+ +   C ++D   A     +  
Sbjct: 138 KLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTN 197

Query: 163 DLTALDTSSV 172
           ++     + V
Sbjct: 198 EVDIPPNTRV 207

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 46.2 bits (109), Expect = 9e-06
 Identities = 13/64 (20%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 92  IGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDF 151
           +  H ++ + L    RL++  ++ + LA LH     +++   +  +I+LD+     L+ F
Sbjct: 198 LLSHSSTHKSLVHHARLQLTLQVIRLLASLHH--YGLVHTYLRPVDIVLDQRGGVFLTGF 255

Query: 152 STAK 155
               
Sbjct: 256 EHLV 259

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 11/60 (18%), Positives = 27/60 (45%), Gaps = 9/60 (15%)

Query: 108 LEIVTKMCQDLA----FLHSSEKQVIYRDFKAPNILLDE-----TFKCNLSDFSTAKVSA 158
             +  ++  D+A    ++ +    +++RD ++PNI L            ++DF  ++ S 
Sbjct: 121 WSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV 180

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)

Query: 110 IVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDF 151
           +   + Q LA+LH+  + VI+RD K+ +ILL    +  LSDF
Sbjct: 146 VCEAVLQALAYLHA--QGVIHRDIKSDSILLTLDGRVKLSDF 185

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 8/72 (11%)

Query: 101 QLRRAERL-EIVTK-----MCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTA 154
            +R+     E  T+     +   L +LH   K +I+RD K  NILL+E     ++DF TA
Sbjct: 120 YIRKIGSFDETCTRFYTAEIVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTA 177

Query: 155 KVSAVENADLTA 166
           KV + E+    A
Sbjct: 178 KVLSPESKQARA 189

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 16/87 (18%), Positives = 34/87 (39%), Gaps = 9/87 (10%)

Query: 102 LRRAER---LEIVTKMCQDLA----FLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTA 154
           ++  +            +D+A    +LHS    +I+RD  + N L+ E     ++DF  A
Sbjct: 98  IKSMDSQYPWSQRVSFAKDIASGMAYLHS--MNIIHRDLNSHNCLVRENKNVVVADFGLA 155

Query: 155 KVSAVENADLTALDTSSVSAQSGKTGM 181
           ++   E      L +     +  +  +
Sbjct: 156 RLMVDEKTQPEGLRSLKKPDRKKRYTV 182

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)

Query: 110 IVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDF 151
           +  +M + L FLHS  K++I+RD KA N+L+       L+DF
Sbjct: 122 VCRQMLEALNFLHS--KRIIHRDLKAGNVLMTLEGDIRLADF 161

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 10/70 (14%)

Query: 113 KMCQD----LAFLHSSEKQ------VIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA 162
           ++       LA LH           + +RD K+ NIL+ +  +C ++D   A + +    
Sbjct: 109 RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTN 168

Query: 163 DLTALDTSSV 172
            L   +   V
Sbjct: 169 QLDVGNNPRV 178

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 2/42 (4%)

Query: 110 IVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDF 151
           +  +  Q L FLHS   QVI+RD K+ NILL       L+DF
Sbjct: 121 VCRECLQALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDF 160

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 44.4 bits (105), Expect = 3e-05
 Identities = 16/75 (21%), Positives = 27/75 (36%), Gaps = 10/75 (13%)

Query: 108 LEIVTKMCQD----LAFLHSSEKQ------VIYRDFKAPNILLDETFKCNLSDFSTAKVS 157
           +E + K+       LA LH           + +RD K+ NIL+ +   C ++D   A   
Sbjct: 138 VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 197

Query: 158 AVENADLTALDTSSV 172
                 +       V
Sbjct: 198 DSATDTIDIAPNHRV 212

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 44.3 bits (105), Expect = 3e-05
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)

Query: 110 IVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDF 151
           I  ++ + L+ LH    +VI+RD K  N+LL E  +  L DF
Sbjct: 134 ICREILRGLSHLHQ--HKVIHRDIKGQNVLLTENAEVKLVDF 173

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 29/141 (20%), Positives = 50/141 (35%), Gaps = 12/141 (8%)

Query: 47  LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL---MQ--KKG-LENVHIGEHPASVR 100
           L  + H   V+    W              K   L   M+  + G L +  I        
Sbjct: 56  LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYD-LIHSEN---L 111

Query: 101 QLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE 160
             +R E   +  ++ + L+++HS  + +I+RD K  NI +DE+    + DF  AK     
Sbjct: 112 NQQRDEYWRLFRQILEALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169

Query: 161 NADLTALDTSSVSAQSGKTGM 181
              L     +   +    T  
Sbjct: 170 LDILKLDSQNLPGSSDNLTSA 190

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 8/60 (13%)

Query: 98  SVRQLRRAERLE------IVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDF 151
           S   L     L+      I+ ++ + L +LHS +K  I+RD KA N+LL E  +  L+DF
Sbjct: 106 SALDLLEPGPLDETQIATILREILKGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADF 163

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 43.9 bits (104), Expect = 4e-05
 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 110 IVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDF 151
           +     Q LA+LHS    +I+RD KA NILL E     L DF
Sbjct: 159 VTHGALQGLAYLHS--HNMIHRDVKAGNILLSEPGLVKLGDF 198

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 43.9 bits (104), Expect = 4e-05
 Identities = 13/56 (23%), Positives = 29/56 (51%), Gaps = 7/56 (12%)

Query: 108 LEIVTKMCQDLA----FLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV 159
           +    ++ Q++     +LH+  K ++++D K+ N+  D   K  ++DF    +S V
Sbjct: 129 VNKTRQIAQEIVKGMGYLHA--KGILHKDLKSKNVFYDN-GKVVITDFGLFSISGV 181

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 43.5 bits (103), Expect = 4e-05
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 110 IVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDF 151
           I+    + L +LH    + I+RD KA NILL+      L+DF
Sbjct: 130 ILQSTLKGLEYLHF--MRKIHRDIKAGNILLNTEGHAKLADF 169

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 43.6 bits (103), Expect = 5e-05
 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 1/74 (1%)

Query: 108 LEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDF-STAKVSAVENADLTA 166
           L+I  + C+ +  +H  +  +I+RD K  N+LL       L DF S   +S   +   +A
Sbjct: 139 LKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSA 198

Query: 167 LDTSSVSAQSGKTG 180
              + V  +  +  
Sbjct: 199 QRRALVEEEITRNT 212

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 43.4 bits (103), Expect = 6e-05
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLT 165
           L  LH     +IYRD K  NILLD      L+DF  +K    +  +  
Sbjct: 172 LEHLHK--LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERA 217

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 43.0 bits (101), Expect = 8e-05
 Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 5/41 (12%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA 158
           L ++H      ++R  KA +IL+    K  LS       + 
Sbjct: 141 LDYIHH--MGYVHRSVKASHILISVDGKVYLSGLR---SNL 176

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)

Query: 108 LEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV 156
           L+   ++C  L  +H   +++++RD K+ NI L +     L DF  A+V
Sbjct: 128 LDWFVQICLALKHVHD--RKILHRDIKSQNIFLTKDGTVQLGDFGIARV 174

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           L +L +  +++I+RD K  NILLDE    +++DF+ A 
Sbjct: 128 LDYLQN--QRIIHRDMKPDNILLDEHGHVHITDFNIAA 163

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 108 LEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV 156
            +   ++C  L  +HS  ++V++RD K  N+ +  T    L D    + 
Sbjct: 139 WKYFVQLCSALEHMHS--RRVMHRDIKPANVFITATGVVKLGDLGLGRF 185

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 42.6 bits (100), Expect = 1e-04
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           L  +H+  + V+YRD K  NILLDE     +SD   A 
Sbjct: 305 LEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLAC 340

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 42.5 bits (100), Expect = 1e-04
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           L  LH   + +IYRD K  N+LLD+     +SD   A 
Sbjct: 302 LEHLHQ--RNIIYRDLKPENVLLDDDGNVRISDLGLAV 337

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           L +LHS EK V+YRD K  N++LD+     ++DF   K
Sbjct: 261 LDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCK 297

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 114 MCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV 156
               LA LHS  + +++ D K  NI L    +C L DF     
Sbjct: 166 TLLALAHLHS--QGLVHLDVKPANIFLGPRGRCKLGDFGLLVE 206

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 3/69 (4%)

Query: 91  HIGEHPASVRQLRRAERLEIVTKMCQDLAFLHS---SEKQVIYRDFKAPNILLDETFKCN 147
            I +     + L     L ++T++   L   H        V++RD K  N+ LD      
Sbjct: 97  VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVK 156

Query: 148 LSDFSTAKV 156
           L DF  A++
Sbjct: 157 LGDFGLARI 165

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           L  LH   ++++YRD K  NILLD+     +SD   A 
Sbjct: 299 LEDLHR--ERIVYRDLKPENILLDDHGHIRISDLGLAV 334

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLT 165
           L  +HS     I+RD K  N+LLD++    L+DF T      E     
Sbjct: 181 LDAIHS--MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 226

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETF-KCNLSDFSTAKVSA 158
           L +LH    Q+++RD K  N+L++       +SDF T+K  A
Sbjct: 135 LKYLHD--NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA 174

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 8/58 (13%)

Query: 100 RQLRRAERL-EIVTK-----MCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDF 151
           R+L++  +  E  T      +   L++ HS  K+VI+RD K  N+LL    +  ++DF
Sbjct: 98  RELQKLSKFDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADF 153

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 20/75 (26%)

Query: 101 QLRRAERL----------EIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSD 150
            LR+++R           E+       L +LHS  K +IYRD K  NILLD+     ++D
Sbjct: 96  LLRKSQRFPNPVAKFYAAEVCLA----LEYLHS--KDIIYRDLKPENILLDKNGHIKITD 149

Query: 151 FSTAKVSAVENADLT 165
           F  AK       D+T
Sbjct: 150 FGFAK----YVPDVT 160

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLD-ETFKCNLSDFSTAKVSAVENA 162
           L FLH+    +I+RD K  NI +   T    + D   A +     A
Sbjct: 142 LQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFA 187

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 40.7 bits (96), Expect = 4e-04
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)

Query: 108 LEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV 156
           LE+  ++ + + ++HS  K++I RD K  NI L +T +  + DF     
Sbjct: 125 LELFEQITKGVDYIHS--KKLINRDLKPSNIFLVDTKQVKIGDFGLVTS 171

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 5/49 (10%)

Query: 110 IVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA 158
           I+ ++ + L +LH      I+RD KA NILL E     ++DF    VSA
Sbjct: 126 ILREVLEGLEYLHK--NGQIHRDVKAGNILLGEDGSVQIADFG---VSA 169

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 40.6 bits (96), Expect = 4e-04
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA 162
           L  LH   K +IYRD K  NI+L+      L+DF   K S  +  
Sbjct: 134 LGHLHQ--KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT 176

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 40.6 bits (96), Expect = 4e-04
 Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA 162
           L  LHS    +IYRD K  NILLDE     L+DF  +K S     
Sbjct: 139 LDHLHS--LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 181

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 40.6 bits (95), Expect = 4e-04
 Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 110 IVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDF 151
           +   + + L +L   + ++++RD K  NIL++   +  L DF
Sbjct: 136 VSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDF 176

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 40.7 bits (96), Expect = 4e-04
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 100 RQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDF 151
            +LR    L++V      + +L S  K  I+RD  A N L+ E     +SDF
Sbjct: 208 ARLRVKTLLQMVGDAAAGMEYLES--KCCIHRDLAARNCLVTEKNVLKISDF 257

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 40.5 bits (95), Expect = 5e-04
 Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 2/38 (5%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           +  +H      ++RD K  NIL+D      L+DF +  
Sbjct: 188 IDSVHQ--LHYVHRDIKPDNILMDMNGHIRLADFGSCL 223

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 40.3 bits (95), Expect = 5e-04
 Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 8/58 (13%)

Query: 100 RQLRRAERL-EIVTK-----MCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDF 151
           ++L++  R  E  +      +   L + H   ++VI+RD K  N+L+    +  ++DF
Sbjct: 103 KELQKHGRFDEQRSATFMEELADALHYCHE--RKVIHRDIKPENLLMGYKGELKIADF 158

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 40.4 bits (95), Expect = 5e-04
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 110 IVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDF 151
           +   + + L +L   +  VI+RD K  NILLDE  +  L DF
Sbjct: 129 MTVAIVKALYYLKE-KHGVIHRDVKPSNILLDERGQIKLCDF 169

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 40.3 bits (95), Expect = 5e-04
 Identities = 19/38 (50%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           L FLH   K +IYRD K  N+LLD    C L+DF   K
Sbjct: 137 LMFLHD--KGIIYRDLKLDNVLLDHEGHCKLADFGMCK 172

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 40.8 bits (95), Expect = 5e-04
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           L FL S  K +IYRD K  N++LD      ++DF   K
Sbjct: 455 LFFLQS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCK 490

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 40.3 bits (95), Expect = 6e-04
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           L FL S  K +IYRD K  N++LD      ++DF   K
Sbjct: 134 LFFLQS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCK 169

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 40.3 bits (95), Expect = 6e-04
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 8/61 (13%)

Query: 101 QLRRAERL-EIVTK-----MCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTA 154
            LRR  R  E   +     +     +LHS    +IYRD K  N+L+D+     ++DF  A
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

Query: 155 K 155
           K
Sbjct: 189 K 189

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 40.3 bits (95), Expect = 6e-04
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 2/38 (5%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           L FLHS  K ++YRD K  NILLD+     ++DF   K
Sbjct: 131 LQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCK 166

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 40.3 bits (95), Expect = 6e-04
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           L +LH   + +IYRD K  N+LLD      L+D+   K
Sbjct: 123 LNYLHE--RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 158

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 40.3 bits (95), Expect = 6e-04
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           L +LHS    ++YRD K  NILLD      L+DF   K
Sbjct: 152 LGYLHS--LNIVYRDLKPENILLDSQGHIVLTDFGLCK 187

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 39.9 bits (94), Expect = 7e-04
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           L +LHS  + V+YRD K  N++LD+     ++DF   K
Sbjct: 118 LEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCK 153

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 40.0 bits (94), Expect = 7e-04
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           L +LH  E+ +IYRD K  N+LLD      L+D+   K
Sbjct: 166 LNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 201

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 40.1 bits (94), Expect = 8e-04
 Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 2/48 (4%)

Query: 118 LAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLT 165
           +  +H      ++RD K  NILLD      L+DF +      +    +
Sbjct: 175 IDSVHR--LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRS 220

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	340
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.98
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.98
3uqc_A	286	Probable conserved transmembrane protein; structur	99.97
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.97
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.93
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.91
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.87
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.75
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.33
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.33
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.25
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.88
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.7
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.67
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.63
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.31
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.21
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.2
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.19
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.16
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.61
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.6
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	97.55
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.49
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.44
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	97.41
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	97.37
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	97.34
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.15
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	97.13
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	97.08
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.89
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	96.75
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	95.57
3mes_A	424	Choline kinase; malaria, structural genomics, stru	95.48
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	91.65
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	89.08
4ann_A	215	ESSB; membrane protein, membrane secretion, ESS ty	85.16

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=7.4e-54  Score=377.56  Aligned_cols=234  Identities=18%  Similarity=0.130  Sum_probs=178.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||+||+|+++.+++.||+|++++..  .....+.+.+|+++|++++|||||+++++|+       +.+++|++||||
T Consensus        42 ~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~-------~~~~~yivmEy~  114 (311)
T 4aw0_A           42 EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ-------DDEKLYFGLSYA  114 (311)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE-------CSSEEEEEECCC
T ss_pred             cccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-------eCCEEEEEEecC
Confidence            5899999999999999999999997532  2234567899999999999999999999776       445788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc--
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE--  160 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~--  160 (340)
                      +||+|.+++++.+.     ++|..++.|+.||+.||+|||+  ++|+||||||+|||++.+|++||+|||+|+.+...  
T Consensus       115 ~gG~L~~~i~~~~~-----l~e~~~~~~~~qi~~al~ylH~--~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~  187 (311)
T 4aw0_A          115 KNGELLKYIRKIGS-----FDETCTRFYTAEIVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK  187 (311)
T ss_dssp             TTEEHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred             CCCCHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence            99999999998776     9999999999999999999999  88999999999999999999999999999987543  


Q ss_pred             -CCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHh
Q 019481          161 -NADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATL  238 (340)
Q Consensus       161 -~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (340)
                       ....+.+||+.|||||.+.+.++- ..|+|+.|+..|.+.++.  .||.......+..                    .
T Consensus       188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~--~PF~~~~~~~~~~--------------------~  245 (311)
T 4aw0_A          188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL--PPFRAGNEGLIFA--------------------K  245 (311)
T ss_dssp             CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSS--CSSCCSSHHHHHH--------------------H
T ss_pred             cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCC--CCCCCCCHHHHHH--------------------H
Confidence             234578999999999654433222 235555555554444433  3333222211110                    0


Q ss_pred             hhhccccccCcCCcccc-------ccccccCCCCchHHHH------hhcCcce
Q 019481          239 LSTITFLSALKITGCKS-------EEGYKNNSSLNPICQI------VNQHPFY  278 (340)
Q Consensus       239 ~~~~~~~~~~~~p~~~~-------~~~l~~dP~~R~t~~~------ll~hp~~  278 (340)
                      +.    ...+.+|..++       ..||++||++|+|+++      +++||||
T Consensus       246 i~----~~~~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F  294 (311)
T 4aw0_A          246 II----KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF  294 (311)
T ss_dssp             HH----HTCCCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGG
T ss_pred             HH----cCCCCCCcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCc
Confidence            01    11123333333       3679999999999987      5889998

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.6e-53  Score=370.40  Aligned_cols=233  Identities=14%  Similarity=0.130  Sum_probs=169.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||+||+|+++.+++.||+|++++..  .....+.+.+|+++|++++|||||+++++|+       +.+..|++||||
T Consensus        23 ~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~-------~~~~~~ivmEy~   95 (275)
T 3hyh_A           23 EGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK-------SKDEIIMVIEYA   95 (275)
T ss_dssp             C---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEE-------CSSEEEEEEECC
T ss_pred             cCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-------ECCEEEEEEeCC
Confidence            6899999999999999999999998632  2334567899999999999999999999776       444788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                       +|+|.+++.+++.     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++++||+|||+|+.......
T Consensus        96 -~g~L~~~l~~~~~-----l~e~~~~~~~~qi~~al~ylH~--~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~  167 (275)
T 3hyh_A           96 -GNELFDYIVQRDK-----MSEQEARRFFQQIISAVEYCHR--HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF  167 (275)
T ss_dssp             -CEEHHHHHHHSCS-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred             -CCCHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCcccccCChHHeEECCCCCEEEeecCCCeecCCCCc
Confidence             6799999988766     9999999999999999999999  8899999999999999999999999999998877776


Q ss_pred             cceeeccceeeccCccccchhh--hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK--MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~--~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      ..+.+||+.|+|||.+.+.++.  ..|+||.|...+.+.++.  .||.......+...+                  .  
T Consensus       168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~--~PF~~~~~~~~~~~i------------------~--  225 (275)
T 3hyh_A          168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR--LPFDDESIPVLFKNI------------------S--  225 (275)
T ss_dssp             -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSS--CSSCCSSHHHHHHHH------------------H--
T ss_pred             cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCC--CCCCCCCHHHHHHHH------------------H--
Confidence            7788999999999776655443  357777777776665554  444332221110000                  0  


Q ss_pred             hccccccCcCCcccc-------ccccccCCCCchHHHHhhcCcce
Q 019481          241 TITFLSALKITGCKS-------EEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~~~~~p~~~~-------~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                          ...+.+|..++       ..||++||++|||++++++|||+
T Consensus       226 ----~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~  266 (275)
T 3hyh_A          226 ----NGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWF  266 (275)
T ss_dssp             ----HTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHH
T ss_pred             ----cCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcCccc
Confidence                11223333333       36799999999999999999999

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1e-52  Score=376.23  Aligned_cols=238  Identities=16%  Similarity=0.139  Sum_probs=176.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||+||+|+++.+++.||+|++++. ......+.+.+|+++|++++|||||+++++|++       .+.+|+|||||+
T Consensus        34 ~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~-------~~~~yiVmEy~~  106 (350)
T 4b9d_A           34 EGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE-------NGSLYIVMDYCE  106 (350)
T ss_dssp             -----CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------TTEEEEEEECCT
T ss_pred             cCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEE-------CCEEEEEEeCCC
Confidence            689999999999999999999999863 344556789999999999999999999998764       447889999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-C
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-A  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~  162 (340)
                      ||+|.++|..+..   ..++|..++.|+.||+.||+|||+  ++|+||||||+|||++.+|++||+|||+|+.+.... .
T Consensus       107 gg~L~~~i~~~~~---~~~~e~~~~~~~~qi~~aL~ylH~--~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~  181 (350)
T 4b9d_A          107 GGDLFKRINAQKG---VLFQEDQILDWFVQICLALKHVHD--RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL  181 (350)
T ss_dssp             TCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHH--TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHH
T ss_pred             CCcHHHHHHHcCC---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeeccCCHHHEEECCCCCEEEcccccceeecCCccc
Confidence            9999999976543   348999999999999999999999  889999999999999999999999999999876543 3


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      ..+.+||+.|||||.+.+-++. ..|+|+.|+..|.+.                     +|..||........    ...
T Consensus       182 ~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyeml---------------------tG~~PF~~~~~~~~----~~~  236 (350)
T 4b9d_A          182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELC---------------------TLKHAFEAGSMKNL----VLK  236 (350)
T ss_dssp             HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH---------------------HSSCSCCCSSHHHH----HHH
T ss_pred             ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHH---------------------HCCCCCCCcCHHHH----HHH
Confidence            4567899999999655443322 235555555544444                     44433332111111    111


Q ss_pred             ccccccCcCCccc-------cccccccCCCCchHHHHhhcCccee
Q 019481          242 ITFLSALKITGCK-------SEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       242 ~~~~~~~~~p~~~-------~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      +.....+.++..+       ...||++||++|||++++++|||+.
T Consensus       237 i~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~  281 (350)
T 4b9d_A          237 IISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIA  281 (350)
T ss_dssp             HHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHH
T ss_pred             HHcCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhh
Confidence            1112223333333       3367999999999999999999994

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=2.8e-52  Score=365.61  Aligned_cols=239  Identities=15%  Similarity=0.102  Sum_probs=178.4

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||+||+|++..+++.||+|.+... ......+.+.+|+++|++++|||||+++++|++.   ..++...|++||||+
T Consensus        36 ~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~---~~~~~~~~lvmEy~~  112 (290)
T 3fpq_A           36 RGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST---VKGKKCIVLVTELMT  112 (290)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEE---ETTEEEEEEEEECCC
T ss_pred             cCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeec---cCCCcEEEEEEeCCC
Confidence            589999999999999999999999753 3445567799999999999999999999988642   223457889999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCc--eecCCCCCCcEEecC-CCceEEeccccceeeccc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQ--VIYRDFKAPNILLDE-TFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~--iiHrDlKp~NILl~~-~~~~kl~DFGla~~~~~~  160 (340)
                      ||+|.+++++...     +++..++.|+.||+.||+|||+  ++  |+||||||+|||++. +|++||+|||+|+... .
T Consensus       113 gg~L~~~l~~~~~-----l~~~~~~~~~~qi~~aL~ylH~--~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~-~  184 (290)
T 3fpq_A          113 SGTLKTYLKRFKV-----MKIKVLRSWCRQILKGLQFLHT--RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR-A  184 (290)
T ss_dssp             SCBHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHT--SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC-T
T ss_pred             CCCHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCCCEEecccChhheeEECCCCCEEEEeCcCCEeCC-C
Confidence            9999999988766     9999999999999999999999  66  999999999999985 8999999999997543 3


Q ss_pred             CCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      ....+.+||+.|||||.+.+.--...|+||                     +|++..+|.+|..||..........   .
T Consensus       185 ~~~~~~~GTp~YmAPE~~~~~y~~~~DiwS---------------------lGvilyelltg~~Pf~~~~~~~~~~---~  240 (290)
T 3fpq_A          185 SFAKAVIGTPEFMAPEMYEEKYDESVDVYA---------------------FGMCMLEMATSEYPYSECQNAAQIY---R  240 (290)
T ss_dssp             TSBEESCSSCCCCCGGGGGTCCCTHHHHHH---------------------HHHHHHHHHHSSCTTTTCSSHHHHH---H
T ss_pred             CccCCcccCccccCHHHcCCCCCcHHHHHH---------------------HHHHHHHHHHCCCCCCCCCcHHHHH---H
Confidence            445678999999999654332111224444                     4444444444444443211110000   0


Q ss_pred             hccccc-cCcCCc-------cccccccccCCCCchHHHHhhcCcce
Q 019481          241 TITFLS-ALKITG-------CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~-~~~~p~-------~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .+.... ++.++.       ++...||++||++|||++++++|||+
T Consensus       241 ~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~  286 (290)
T 3fpq_A          241 RVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF  286 (290)
T ss_dssp             HHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             HHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccc
Confidence            111111 111222       23447899999999999999999999

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=3.6e-52  Score=372.06  Aligned_cols=239  Identities=16%  Similarity=0.156  Sum_probs=178.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||+||+|+++.+|+.||+|+++... ....+.+.+|+++|++++|||||+++++|++       .+.+|+|||||+|
T Consensus        84 ~G~fG~V~~a~~~~tg~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-------~~~~~ivmEy~~g  155 (346)
T 4fih_A           84 EGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLV-------GDELWVVMEFLEG  155 (346)
T ss_dssp             ECSSCEEEEEEETTTCCEEEEEEEEGGG-CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEE-------TTEEEEEECCCTT
T ss_pred             cCcCeEEEEEEECCCCCEEEEEEEecCc-hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-------CCEEEEEEeCCCC
Confidence            5999999999999999999999998533 2334668899999999999999999998764       3478899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-CCc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-NAD  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~~~  163 (340)
                      |+|.+++.+. .     +++..++.|+.||+.||+|||+  ++|+||||||+|||++.+|++||+|||+|+.+... ...
T Consensus       156 g~L~~~l~~~-~-----l~e~~~~~~~~qi~~aL~ylH~--~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~  227 (346)
T 4fih_A          156 GALTDIVTHT-R-----MNEEQIAAVCLAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR  227 (346)
T ss_dssp             EEHHHHHHHS-C-----CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCB
T ss_pred             CcHHHHHHcC-C-----CCHHHHHHHHHHHHHHHHHHHH--CCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcc
Confidence            9999999753 3     9999999999999999999999  88999999999999999999999999999987654 445


Q ss_pred             ceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhc
Q 019481          164 LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTI  242 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  242 (340)
                      .+.+||+.|||||.+.+.++- ..|+                |+     +|++..+|.+|..||................
T Consensus       228 ~~~~GTp~YmAPEvl~~~~y~~~~Di----------------WS-----lGvilyeml~G~~PF~~~~~~~~~~~i~~~~  286 (346)
T 4fih_A          228 KSLVGTPYWMAPELISRLPYGPEVDI----------------WS-----LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL  286 (346)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHH----------------HH-----HHHHHHHHHHSSCTTTTSCHHHHHHHHHHSS
T ss_pred             cccccCcCcCCHHHHCCCCCCcHHHH----------------HH-----HHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC
Confidence            678999999999543322221 1234                44     5555555555555554322211111110000


Q ss_pred             c--ccccCcCC---ccccccccccCCCCchHHHHhhcCcceee
Q 019481          243 T--FLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       243 ~--~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                      .  ....+.++   .++...||++||++|||++++++|||+.+
T Consensus       287 ~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~  329 (346)
T 4fih_A          287 PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK  329 (346)
T ss_dssp             CCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred             CCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcC
Confidence            0  00011111   12344679999999999999999999943

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=5.1e-51  Score=373.34  Aligned_cols=240  Identities=16%  Similarity=0.147  Sum_probs=180.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|+++.+|+.||+|+++... ....+.+.+|+++|++++|||||+++++|++       .+.+|+|||||+|
T Consensus       161 ~G~fG~V~~a~~~~tg~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-------~~~~~iVmEy~~g  232 (423)
T 4fie_A          161 EGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLV-------GDELWVVMEFLEG  232 (423)
T ss_dssp             ECSSCEEEEEEETTTCCEEEEEEEESTT-CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEE-------TTEEEEEEECCTT
T ss_pred             cCcCcEEEEEEECCCCCEEEEEEEeccc-hhHHHHHHHHHHHHHhCCCCCCCceEEEEEE-------CCEEEEEEeCCCC
Confidence            5899999999999999999999998643 2345668999999999999999999998864       3478899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-CCc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-NAD  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~~~  163 (340)
                      |+|.++++.. .     +++..++.|+.||+.||+|||+  ++|+||||||+||||+.+|++||+|||+|+.+... ...
T Consensus       233 G~L~~~i~~~-~-----l~e~~~~~~~~qil~aL~ylH~--~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~  304 (423)
T 4fie_A          233 GALTDIVTHT-R-----MNEEQIAAVCLAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR  304 (423)
T ss_dssp             EEHHHHHHHS-C-----CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCB
T ss_pred             CcHHHHHhcc-C-----CCHHHHHHHHHHHHHHHHHHHH--CCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccc
Confidence            9999999753 3     9999999999999999999999  88999999999999999999999999999987654 445


Q ss_pred             ceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhcc
Q 019481          164 LTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTIT  243 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  243 (340)
                      .+.+||+.|||||.+.+.++             +.  ..|.|+     +|++..+|.+|..||.................
T Consensus       305 ~~~~GTp~YmAPEvl~~~~y-------------~~--~~DiWS-----lGvilyeml~G~~PF~~~~~~~~~~~i~~~~~  364 (423)
T 4fie_A          305 KSLVGTPYWMAPELISRLPY-------------GP--EVDIWS-----LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP  364 (423)
T ss_dssp             CCCEECTTTCCHHHHTTCCB-------------CT--HHHHHH-----HHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC
T ss_pred             cccccCcCcCCHHHHCCCCC-------------Cc--HHHHHH-----HHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC
Confidence            67899999999954332221             12  222355     55555556555555543222211111111000


Q ss_pred             --ccccCcCC---ccccccccccCCCCchHHHHhhcCcceee
Q 019481          244 --FLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       244 --~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                        ......++   .++...||++||++|||++++++|||+.+
T Consensus       365 ~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~  406 (423)
T 4fie_A          365 PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK  406 (423)
T ss_dssp             CCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred             CCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcC
Confidence              00011111   12344789999999999999999999943

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=3e-51  Score=365.05  Aligned_cols=235  Identities=14%  Similarity=0.072  Sum_probs=173.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||+||+|+++.+++.||+|+++....      ..+|+++|++++|||||+++++|++       ...+|++||||+|
T Consensus        68 ~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------~~~E~~il~~l~HpnIV~l~~~~~~-------~~~~~ivmEy~~g  134 (336)
T 4g3f_A           68 RGSFGEVHRMKDKQTGFQCAVKKVRLEVF------RVEELVACAGLSSPRIVPLYGAVRE-------GPWVNIFMELLEG  134 (336)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEETTTC------CTHHHHTTTTCCCTTBCCEEEEEEE-------TTEEEEEECCCTT
T ss_pred             cCCCeEEEEEEECCCCCEEEEEEECHHHh------HHHHHHHHHhCCCCCCCcEEEEEEE-------CCEEEEEEeccCC
Confidence            58999999999999999999999975321      2479999999999999999997764       3478899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC-ceEEeccccceeecccCC-
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF-KCNLSDFSTAKVSAVENA-  162 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~-~~kl~DFGla~~~~~~~~-  162 (340)
                      |+|.+++++.+.     +++..++.|+.||+.||+|||+  ++|+||||||+|||++.+| ++||+|||+|+.+..+.. 
T Consensus       135 g~L~~~l~~~~~-----l~e~~~~~~~~qi~~aL~ylH~--~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~  207 (336)
T 4g3f_A          135 GSLGQLIKQMGC-----LPEDRALYYLGQALEGLEYLHT--RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG  207 (336)
T ss_dssp             CBHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHT--TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred             CcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence            999999998766     9999999999999999999999  8899999999999999988 699999999998765332 


Q ss_pred             -----cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHH
Q 019481          163 -----DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIA  236 (340)
Q Consensus       163 -----~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (340)
                           ..+.+||+.|||||.+.+-++. ..|+|+.|+..|.+.++.  .||.......+...+..+..++.         
T Consensus       208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~--~Pf~~~~~~~~~~~i~~~~~~~~---------  276 (336)
T 4g3f_A          208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC--HPWTQYFRGPLCLKIASEPPPIR---------  276 (336)
T ss_dssp             ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS--CSSTTTCCSCCHHHHHHSCCGGG---------
T ss_pred             cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCc--CCCCCCCHHHHHHHHHcCCCCch---------
Confidence                 2345899999999765544333 236676666666665544  44433332222111111111100         


Q ss_pred             HhhhhccccccCcCCc---cccccccccCCCCchHHHHh-------------hcCcce
Q 019481          237 TLLSTITFLSALKITG---CKSEEGYKNNSSLNPICQIV-------------NQHPFY  278 (340)
Q Consensus       237 ~~~~~~~~~~~~~~p~---~~~~~~l~~dP~~R~t~~~l-------------l~hp~~  278 (340)
                              ...+.++.   ++...||++||.+|||+++|             ++|||+
T Consensus       277 --------~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~  326 (336)
T 4g3f_A          277 --------EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWK  326 (336)
T ss_dssp             --------GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSS
T ss_pred             --------hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCc
Confidence                    00111111   23446799999999999987             679998

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=4.1e-52  Score=366.33  Aligned_cols=234  Identities=21%  Similarity=0.145  Sum_probs=168.3

Q ss_pred             CCcceEEEEEEcC---CCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVPFP---DDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~~~---~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|+||+||+|++.   .+++.||+|++++.. .......+.+|+++|++++|||||+++++|++       .+.+|++||
T Consensus        34 ~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-------~~~~~ivmE  106 (304)
T 3ubd_A           34 QGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT-------EGKLYLILD  106 (304)
T ss_dssp             CGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEE-------TTEEEEEEC
T ss_pred             cCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-------CCEEEEEEE
Confidence            6899999999873   467899999997522 22234468899999999999999999998764       347889999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc-
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-  159 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-  159 (340)
                      ||+||||.+++.+.+.     +++..++.++.||+.||+|||+  ++|+||||||+|||++.+|++||+|||+|+.... 
T Consensus       107 y~~gg~L~~~l~~~~~-----l~e~~~~~~~~qi~~aL~ylH~--~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~  179 (304)
T 3ubd_A          107 FLRGGDLFTRLSKEVM-----FTEEDVKFYLAELALALDHLHS--LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH  179 (304)
T ss_dssp             CCTTCEEHHHHHHHCC-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred             cCCCCCHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence            9999999999998776     9999999999999999999999  8899999999999999999999999999987544 


Q ss_pred             cCCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHh
Q 019481          160 ENADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATL  238 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (340)
                      .....+.+||+.|||||.+.+-++. ..|+||.|+..|.+.+                     |..||.......... .
T Consensus       180 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemlt---------------------G~~PF~~~~~~~~~~-~  237 (304)
T 3ubd_A          180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT---------------------GTLPFQGKDRKETMT-M  237 (304)
T ss_dssp             -CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHH---------------------SSCSSCCSSHHHHHH-H
T ss_pred             CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHh---------------------CCCCCCCcCHHHHHH-H
Confidence            3445678999999999644332222 2255554444444443                     333332211111111 1


Q ss_pred             hhhccccccCcCCcccc-------ccccccCCCCchHH-----HHhhcCcce
Q 019481          239 LSTITFLSALKITGCKS-------EEGYKNNSSLNPIC-----QIVNQHPFY  278 (340)
Q Consensus       239 ~~~~~~~~~~~~p~~~~-------~~~l~~dP~~R~t~-----~~ll~hp~~  278 (340)
                      +.    ...+.+|..++       ..||++||++|||+     +++++|||+
T Consensus       238 i~----~~~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f  285 (304)
T 3ubd_A          238 IL----KAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFF  285 (304)
T ss_dssp             HH----HCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGG
T ss_pred             HH----cCCCCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccc
Confidence            11    11233333333       36799999999994     799999999

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=6.9e-50  Score=353.18  Aligned_cols=243  Identities=16%  Similarity=0.183  Sum_probs=170.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccc-----cCCcceeeeee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICL-----TGDRRYCWKNK   79 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~-----~~~~~~~~~~~   79 (340)
                      .|+||+||+|+++.+++.||+|+++........+.+.+|+++|++++|||||+++++|.+....     ..+..++|++|
T Consensus        15 ~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivm   94 (299)
T 4g31_A           15 RGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQM   94 (299)
T ss_dssp             ECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEE
T ss_pred             cCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEE
Confidence            5899999999999999999999998755556667899999999999999999999998754321     12445689999


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      |||+||+|.+++.....  ....++..++.++.||++||+|||+  ++|+||||||+|||++.++++||+|||+|+.+..
T Consensus        95 E~~~gg~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~al~ylH~--~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~  170 (299)
T 4g31_A           95 QLCRKENLKDWMNGRCT--IEERERSVCLHIFLQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQ  170 (299)
T ss_dssp             ECCCSCCHHHHHHTCCS--GGGSCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCGGGEEECTTCCEEECCCCCC-----
T ss_pred             ecCCCCcHHHHHHhcCC--CChhHHHHHHHHHHHHHHHHHHHHH--CcCccccCcHHHeEECCCCcEEEccCccceecCC
Confidence            99999999999987765  1335677899999999999999999  8899999999999999999999999999998765


Q ss_pred             cCC-------------cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchh
Q 019481          160 ENA-------------DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENET  225 (340)
Q Consensus       160 ~~~-------------~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  225 (340)
                      +..             ..+.+||+.|||||.+.+-.+- ..|+||.|+..+++..     ||....              
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~-----Pf~~~~--------------  231 (299)
T 4g31_A          171 DEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY-----PFSTQM--------------  231 (299)
T ss_dssp             ---------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS-----CCSSHH--------------
T ss_pred             CccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc-----CCCCcc--------------
Confidence            322             2345799999999655443322 2366666665555431     221110              


Q ss_pred             HHHHHHHHHHHHhhhhccccccCcCC-------ccccccccccCCCCchHHHHhhcCcce
Q 019481          226 WNNFLYLLLIATLLSTITFLSALKIT-------GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                       +.. ..   ........   .|..+       ..+...||++||.+|||++++++|||+
T Consensus       232 -~~~-~~---~~~~~~~~---~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~  283 (299)
T 4g31_A          232 -ERV-RT---LTDVRNLK---FPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVF  283 (299)
T ss_dssp             -HHH-HH---HHHHHTTC---CCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGG
T ss_pred             -HHH-HH---HHHHhcCC---CCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhh
Confidence             000 00   00000000   01110       123457899999999999999999999

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.7e-48  Score=354.65  Aligned_cols=189  Identities=17%  Similarity=0.153  Sum_probs=153.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||+||+|+++.+|+.||+|++++. ......+.+.+|+++|++++|||||+++++|..... +.+...+|+|||||+
T Consensus        64 ~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~-~~~~~~~~ivmE~~~  142 (398)
T 4b99_A           64 NGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVP-YGEFKSVYVVLDLME  142 (398)
T ss_dssp             ECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSC-TTTCCCEEEEEECCS
T ss_pred             cccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccc-cccCCEEEEEEeCCC
Confidence            599999999999999999999999753 334455778899999999999999999998765422 335567899999996


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc---
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE---  160 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~---  160 (340)
                       |+|.+++...+.     +++..++.|++||+.||+|||+  ++|+||||||+|||++.+|.+||+|||+|+.+...   
T Consensus       143 -g~L~~~i~~~~~-----l~~~~~~~~~~qil~al~ylH~--~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~  214 (398)
T 4b99_A          143 -SDLHQIIHSSQP-----LTLEHVRYFLYQLLRGLKYMHS--AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAE  214 (398)
T ss_dssp             -EEHHHHHTSSSC-----CCHHHHHHHHHHHHHHHHHHHH--TTCBCCCCCGGGEEECTTCCEEECCCTTCBCC------
T ss_pred             -CCHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CcCcCCCcCccccccCCCCCEEEeecceeeecccCccc
Confidence             689999988765     9999999999999999999999  88999999999999999999999999999876432   


Q ss_pred             --CCcceeeccceeeccCccccchhh--hhHhHhCCcccccccccc
Q 019481          161 --NADLTALDTSSVSAQSGKTGMEMK--MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       161 --~~~~~~~gt~~~~~p~~~~~~~~~--~~~~~s~g~~~~~~~~~~  202 (340)
                        ....+.+||+.|+|||.+.+...+  ..|+||.|+..+.+.++.
T Consensus       215 ~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~  260 (398)
T 4b99_A          215 HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR  260 (398)
T ss_dssp             -CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTS
T ss_pred             cccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCC
Confidence              234567999999999765543321  346676666666655544

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1e-47  Score=339.08  Aligned_cols=158  Identities=18%  Similarity=0.188  Sum_probs=130.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeec-cCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHEL-ITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~-~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||+||+|++..   .||+|+++. ....+..+.+.+|+++|++++|||||++++++..        +..++|||||
T Consensus        45 G~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~--------~~~~iVmEy~  113 (307)
T 3omv_A           45 GSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK--------DNLAIVTQWC  113 (307)
T ss_dssp             CCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--------SSCEEEEECC
T ss_pred             eeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC--------CeEEEEEEcC
Confidence            369999999998753   499999975 3344566789999999999999999999996532        2467999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc--
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE--  160 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~--  160 (340)
                      +||||.++++....    .+++.++..|+.||++||+|||+  ++||||||||+|||+++++++||+|||+|+.....  
T Consensus       114 ~gGsL~~~l~~~~~----~l~~~~~~~i~~qia~gL~yLH~--~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~  187 (307)
T 3omv_A          114 EGSSLYKHLHVQET----KFQMFQLIDIARQTAQGMDYLHA--KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG  187 (307)
T ss_dssp             SSCBHHHHHHTSCC----CCCHHHHHHHHHHHHHHHHHHHH--TTCBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred             CCCCHHHHHhhcCC----CCCHHHHHHHHHHHHHHHHHHHH--CCccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence            99999999987653    39999999999999999999999  88999999999999999999999999999876542  


Q ss_pred             -CCcceeeccceeeccCcc
Q 019481          161 -NADLTALDTSSVSAQSGK  178 (340)
Q Consensus       161 -~~~~~~~gt~~~~~p~~~  178 (340)
                       ....+.+||+.|||||.+
T Consensus       188 ~~~~~~~~GT~~ymAPE~l  206 (307)
T 3omv_A          188 SQQVEQPTGSVLWMAPEVI  206 (307)
T ss_dssp             ------CCCCTTSCCHHHH
T ss_pred             ceeecccccCCCccCHHHh
Confidence             233456899999999543

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1.2e-46  Score=333.30  Aligned_cols=163  Identities=15%  Similarity=0.131  Sum_probs=134.5

Q ss_pred             CCcceEEEEEEcC-----CCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            5 APSFSVLIHVPFP-----DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         5 ~G~fg~V~~~~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      .|+||+||+|+..     .+++.||+|+++........+.|.+|+.+|++++|||||+++|++.       +....++||
T Consensus        36 ~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-------~~~~~~lV~  108 (308)
T 4gt4_A           36 EDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT-------KDQPLSMIF  108 (308)
T ss_dssp             ECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-------SSSSCEEEE
T ss_pred             cCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEE-------ECCEEEEEE
Confidence            5899999999853     4678999999976554555678999999999999999999999664       334677999


Q ss_pred             ccccCCCHHHHhcccCCC-----------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEE
Q 019481           80 WLMQKKGLENVHIGEHPA-----------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNL  148 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl  148 (340)
                      |||++|||.++|..+...           ....+++..+..++.||++||+|||+  ++||||||||+|||+++++++||
T Consensus       109 Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~--~~iiHRDLK~~NILl~~~~~~Ki  186 (308)
T 4gt4_A          109 SYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS--HHVVHKDLATRNVLVYDKLNVKI  186 (308)
T ss_dssp             ECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEECGGGCEEE
T ss_pred             EcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh--CCCCCCCccccceEECCCCCEEE
Confidence            999999999999764321           12359999999999999999999999  88999999999999999999999


Q ss_pred             eccccceeecccC---CcceeeccceeeccC
Q 019481          149 SDFSTAKVSAVEN---ADLTALDTSSVSAQS  176 (340)
Q Consensus       149 ~DFGla~~~~~~~---~~~~~~gt~~~~~p~  176 (340)
                      +|||+|+.+...+   ...+.+||+.|||||
T Consensus       187 ~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE  217 (308)
T 4gt4_A          187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPE  217 (308)
T ss_dssp             CCSCCBCGGGGGGCBCSSSSSCBCGGGCCHH
T ss_pred             CCcccceeccCCCceeEecccccCCcccCHH
Confidence            9999998765433   233457888899885

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=2.6e-47  Score=336.23  Aligned_cols=234  Identities=15%  Similarity=0.129  Sum_probs=164.9

Q ss_pred             CCcceEEEEEEcC-----CCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            5 APSFSVLIHVPFP-----DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         5 ~G~fg~V~~~~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      .|+||+||+|++.     .+++.||+|+++.. .....+++.+|+++|++++|||||++++++.       +.+..+++|
T Consensus        23 ~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~-------~~~~~~lV~   94 (299)
T 4asz_A           23 EGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAELLTNLQHEHIVKFYGVCV-------EGDPLIMVF   94 (299)
T ss_dssp             C--CCCEEEEEECSCC----CEEEEEEEECSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-------SSSSEEEEE
T ss_pred             eCCCcEEEEEEECCcccCCCCEEEEEEEeCCC-ChHHHHHHHHHHHHHHhCCCCCCccEEEEEe-------eCCEEEEEE
Confidence            6999999999865     35788999999753 3455678999999999999999999999765       344678999


Q ss_pred             ccccCCCHHHHhcccCC--------CccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecc
Q 019481           80 WLMQKKGLENVHIGEHP--------ASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDF  151 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~--------~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DF  151 (340)
                      |||++|||.++|+..+.        .....++|.++..++.||++||+|||+  ++|+||||||+|||+++++++||+||
T Consensus        95 Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~--~~iiHRDlKp~NILl~~~~~~Ki~DF  172 (299)
T 4asz_A           95 EYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS--QHFVHRDLATRNCLVGENLLVKIGDF  172 (299)
T ss_dssp             ECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEECGGGCEEECCC
T ss_pred             EcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh--CCcccCccCHhhEEECCCCcEEECCc
Confidence            99999999999986531        112459999999999999999999999  88999999999999999999999999


Q ss_pred             ccceeecccCCc---ceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccC-CchhHH
Q 019481          152 STAKVSAVENAD---LTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKT-ENETWN  227 (340)
Q Consensus       152 Gla~~~~~~~~~---~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~  227 (340)
                      |+|+........   ...+||+.|||||.+.+..+             ..  ..+.|+     .|++..+|.+ |..||.
T Consensus       173 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~-------------~~--k~DVwS-----~Gvvl~Ellt~G~~Pf~  232 (299)
T 4asz_A          173 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKF-------------TT--ESDVWS-----LGVVLWEIFTYGKQPWY  232 (299)
T ss_dssp             SCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCC-------------CH--HHHHHH-----HHHHHHHHHTTTCCTTT
T ss_pred             ccceecCCCCceeecCceecChhhcCHHHHcCCCC-------------Cc--hhhHHH-----HHHHHHHHHcCCCCCCC
Confidence            999876554322   23468888888843221111             11  122244     4444444443 444443


Q ss_pred             HHHHHHHHHHhhhhccccccCcCCccc-------cccccccCCCCchHHHHh
Q 019481          228 NFLYLLLIATLLSTITFLSALKITGCK-------SEEGYKNNSSLNPICQIV  272 (340)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~p~~~-------~~~~l~~dP~~R~t~~~l  272 (340)
                      ........    ..+..+..+..|..+       -..||+.||++|||++++
T Consensus       233 ~~~~~~~~----~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i  280 (299)
T 4asz_A          233 QLSNNEVI----ECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGI  280 (299)
T ss_dssp             TSCHHHHH----HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCCHHHHH----HHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHH
Confidence            32221111    111122233334333       337899999999999998

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=9.3e-47  Score=337.13  Aligned_cols=236  Identities=14%  Similarity=0.101  Sum_probs=160.9

Q ss_pred             CCcceEEEEEEcC-----CCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            5 APSFSVLIHVPFP-----DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         5 ~G~fg~V~~~~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      .|+||+||+|++.     .+++.||+|+++.. .....+++.+|+++|++++|||||++++++.       +....++||
T Consensus        51 ~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~-------~~~~~~lV~  122 (329)
T 4aoj_A           51 EGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIVRFFGVCT-------EGRPLLMVF  122 (329)
T ss_dssp             ECSSEEEEEEEESSSCC---CEEEEEEEESCC-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-------SSSSEEEEE
T ss_pred             cCCCcEEEEEEECCcccCCCCeEEEEEEECcC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-------ECCEEEEEE
Confidence            5899999999864     46889999999753 3456678999999999999999999999765       344678999


Q ss_pred             ccccCCCHHHHhcccCCC----------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEe
Q 019481           80 WLMQKKGLENVHIGEHPA----------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLS  149 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~----------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~  149 (340)
                      |||++|||.++++.....          ...++++.++..|+.||++||+|||+  ++|+||||||+|||+++++++||+
T Consensus       123 Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~--~~iiHRDLKp~NILl~~~~~~Ki~  200 (329)
T 4aoj_A          123 EYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG--LHFVHRDLATRNCLVGQGLVVKIG  200 (329)
T ss_dssp             ECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEEETTTEEEEC
T ss_pred             EcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc--CCeecccccHhhEEECCCCcEEEc
Confidence            999999999999875421          12359999999999999999999999  889999999999999999999999


Q ss_pred             ccccceeecccCC---cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccC-Cch
Q 019481          150 DFSTAKVSAVENA---DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKT-ENE  224 (340)
Q Consensus       150 DFGla~~~~~~~~---~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~  224 (340)
                      |||+|+.....+.   ....+||+.|||||.+.+..+. ..|+||.|...                     .+|.+ |..
T Consensus       201 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl---------------------~Ellt~G~~  259 (329)
T 4aoj_A          201 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL---------------------WEIFTYGKQ  259 (329)
T ss_dssp             CCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHH---------------------HHHHTTSCC
T ss_pred             ccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHH---------------------HHHHcCCCC
Confidence            9999997654332   2345789989998533322211 12344433333                     33333 333


Q ss_pred             hHHHHHHHHHHHHhhhhccccccCcCCccc-------cccccccCCCCchHHHHhhcC
Q 019481          225 TWNNFLYLLLIATLLSTITFLSALKITGCK-------SEEGYKNNSSLNPICQIVNQH  275 (340)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-------~~~~l~~dP~~R~t~~~ll~h  275 (340)
                      ||.........    ..+..+..+..|..+       -..||+.||++|||+++++++
T Consensus       260 Pf~~~~~~~~~----~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          260 PWYQLSNTEAI----DCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             TTCSSCHHHHH----HHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             CCCCCCHHHHH----HHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            33221111111    111112233334333       336899999999999998654

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=1.3e-45  Score=352.35  Aligned_cols=236  Identities=18%  Similarity=0.074  Sum_probs=173.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc--hhhHHHH---HHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP--LQLRRDD---DGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~---~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      .|+||+||+|+++.+|+.||+|++++..-  .......   .+++++++.++|||||+++++|+       +...+|+||
T Consensus       199 ~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~-------~~~~lylVm  271 (689)
T 3v5w_A          199 RGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH-------TPDKLSFIL  271 (689)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE-------CSSEEEEEE
T ss_pred             cccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEE-------ECCEEEEEE
Confidence            59999999999999999999999975211  1112223   34466777889999999999876       445788999


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      |||+||+|.++|.+.+.     +++..++.|+.||+.||+|||+  ++||||||||+||||+.+|++||+|||+|+.+..
T Consensus       272 Ey~~GGdL~~~l~~~~~-----l~E~~a~~y~~qIl~aL~yLH~--~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~  344 (689)
T 3v5w_A          272 DLMNGGDLHYHLSQHGV-----FSEADMRFYAAEIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDFSK  344 (689)
T ss_dssp             CCCCSCBHHHHHHHHCC-----CCHHHHHHHHHHHHHHHHHHHT--TTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             ecCCCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence            99999999999998776     9999999999999999999999  8899999999999999999999999999998755


Q ss_pred             cCCcceeeccceeeccCccc-cchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHH
Q 019481          160 ENADLTALDTSSVSAQSGKT-GMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIAT  237 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~~~~-~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (340)
                      . ...+.+||+.|||||.+. +.++- ..|+|+.|+..|                     +|.+|..||........ . 
T Consensus       345 ~-~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilY---------------------EmLtG~~PF~~~~~~~~-~-  400 (689)
T 3v5w_A          345 K-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLF---------------------KLLRGHSPFRQHKTKDK-H-  400 (689)
T ss_dssp             C-CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHH---------------------HHHHSSCTTCGGGCCCH-H-
T ss_pred             C-CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHH---------------------HHHhCCCCCCCCChHHH-H-
Confidence            4 356789999999996443 22221 234555444444                     44444444422100000 0 


Q ss_pred             hhhhccccccCcCCccccc-------cccccCCCCchH-----HHHhhcCcce
Q 019481          238 LLSTITFLSALKITGCKSE-------EGYKNNSSLNPI-----CQIVNQHPFY  278 (340)
Q Consensus       238 ~~~~~~~~~~~~~p~~~~~-------~~l~~dP~~R~t-----~~~ll~hp~~  278 (340)
                      .+........+..|..+++       .||++||++|++     ++++++|||+
T Consensus       401 ~i~~~i~~~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF  453 (689)
T 3v5w_A          401 EIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF  453 (689)
T ss_dssp             HHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGG
T ss_pred             HHHHhhcCCCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccc
Confidence            0001111222344444444       569999999998     7999999999

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=5.9e-47  Score=362.58  Aligned_cols=239  Identities=13%  Similarity=0.101  Sum_probs=179.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||+||+|+++.+|+.||+|++.... ....+.+.+|+++|++++|||||+++++|+       +...+|++||||+|
T Consensus       167 ~G~fg~V~~~~~~~tg~~~AiK~i~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~-------~~~~~~iv~E~~~g  238 (573)
T 3uto_A          167 TGAFGVVHRVTERATGNNFAAKFVMTPH-ESDKETVRKEIQTMSVLRHPTLVNLHDAFE-------DDNEMVMIYEFMSG  238 (573)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHHHTCCTTBCCEEEEEE-------CSSEEEEEEECCCC
T ss_pred             eccCeEEEEEEECCCCCEEEEEEEeccc-hhhHHHHHHHHHHHHhCCCCCCCeEEEEEE-------ECCEEEEEEeecCC
Confidence            5899999999999999999999997543 344577899999999999999999999776       44578899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCC--CceEEeccccceeecccCC
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDET--FKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~--~~~kl~DFGla~~~~~~~~  162 (340)
                      |+|.+++.....    .+++.+++.+++||++||+|||+  ++|+||||||+|||++.+  +.+||+|||+|+.+.....
T Consensus       239 g~L~~~i~~~~~----~l~e~~~~~~~~qi~~al~ylH~--~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~  312 (573)
T 3uto_A          239 GELFEKVADEHN----KMSEDEAVEYMRQVCKGLCHMHE--NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS  312 (573)
T ss_dssp             CBHHHHHTCTTS----CEEHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE
T ss_pred             CcHHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHH--CCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc
Confidence            999999976543    39999999999999999999999  889999999999999854  8999999999999888777


Q ss_pred             cceeeccceeeccCccccchhhh-hHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMKM-AQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~~-~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      ..+.+||+.|+|||.+.+.++-. .|+|+.|+..|.+                     .+|..||.......... .+..
T Consensus       313 ~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyem---------------------l~G~~Pf~~~~~~~~~~-~i~~  370 (573)
T 3uto_A          313 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYIL---------------------LSGLSPFGGENDDETLR-NVKS  370 (573)
T ss_dssp             EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHH---------------------HHSCCSSCCSSHHHHHH-HHHT
T ss_pred             eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHH---------------------HHCCCCCCCcCHHHHHH-HHHh
Confidence            77889999999996444333221 2455544444443                     33333332211111000 1111


Q ss_pred             ccccccCc----CC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          242 ITFLSALK----IT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       242 ~~~~~~~~----~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ..+...+.    ++   .++...||++||.+|||++++++|||+.
T Consensus       371 ~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~  415 (573)
T 3uto_A          371 CDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLT  415 (573)
T ss_dssp             TCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTS
T ss_pred             CCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcC
Confidence            11111111    11   1234468999999999999999999993

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=3.2e-45  Score=329.83  Aligned_cols=239  Identities=15%  Similarity=0.039  Sum_probs=168.1

Q ss_pred             CCcceEEEEEEcCCC-----CceEEEEEeeccCchhhHHHHHHHHHHhhhcCC-CccccccccccccccccCCcceeeee
Q 019481            5 APSFSVLIHVPFPDD-----RDDVMLKLHELITPLQLRRDDDGKLDSLEEIFH-PNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~-----~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~h-pnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      .|+||+||+|++..+     ++.||+|.++........+.+.+|+++|++++| ||||++++++..      +...++++
T Consensus        74 ~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~------~~~~~~iV  147 (353)
T 4ase_A           74 RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK------PGGPLMVI  147 (353)
T ss_dssp             ECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC------TTSCCEEE
T ss_pred             cCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe------cCCEEEEE
Confidence            599999999987543     468999999875555667789999999999976 899999996532      23357799


Q ss_pred             eccccCCCHHHHhcccCCC-----------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceE
Q 019481           79 KWLMQKKGLENVHIGEHPA-----------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCN  147 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~k  147 (340)
                      ||||++|||.++|+.....           ....+++..+..++.||++||+|||+  ++||||||||+|||+++++.+|
T Consensus       148 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~--~~iiHRDLK~~NILl~~~~~vK  225 (353)
T 4ase_A          148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVK  225 (353)
T ss_dssp             EECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEECGGGCEE
T ss_pred             EEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh--CCeecCccCccceeeCCCCCEE
Confidence            9999999999999764320           02348999999999999999999999  8899999999999999999999


Q ss_pred             EeccccceeecccCC---cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccC-C
Q 019481          148 LSDFSTAKVSAVENA---DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKT-E  222 (340)
Q Consensus       148 l~DFGla~~~~~~~~---~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~  222 (340)
                      |+|||+|+.+..+..   ..+.+||+.|||||.+.+..+. ..|+||.|...                     .+|.+ |
T Consensus       226 i~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l---------------------~El~t~G  284 (353)
T 4ase_A          226 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL---------------------WEIFSLG  284 (353)
T ss_dssp             ECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH---------------------HHHTTTS
T ss_pred             ECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHH---------------------HHHHhCC
Confidence            999999997755432   2345788888888532221111 12344433333                     33332 3


Q ss_pred             chhHHHHHHHHHHHHhhhhccccccCcCCcccc-------ccccccCCCCchHHHHhhcC
Q 019481          223 NETWNNFLYLLLIATLLSTITFLSALKITGCKS-------EEGYKNNSSLNPICQIVNQH  275 (340)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-------~~~l~~dP~~R~t~~~ll~h  275 (340)
                      ..||+.......   ....+..+..+..|..++       ..||+.||++|||++++++|
T Consensus       285 ~~Pf~~~~~~~~---~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          285 ASPYPGVKIDEE---FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             CCSSTTCCCSHH---HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCCHHHH---HHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            333322110000   011111122333443333       36899999999999999887

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=3.4e-45  Score=331.54  Aligned_cols=178  Identities=15%  Similarity=0.067  Sum_probs=141.8

Q ss_pred             CCcceEEEEEEcC---CCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVPFP---DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~~~---~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|+||+||+|+++   .+++.||+|.+....   ...++.+|+++|+.+ +|||||+++++|++       .+++|++||
T Consensus        31 ~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~---~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~-------~~~~~lvmE  100 (361)
T 4f9c_A           31 EGTFSSVYLATAQLQVGPEEKIALKHLIPTS---HPIRIAAELQCLTVAGGQDNVMGVKYCFRK-------NDHVVIAMP  100 (361)
T ss_dssp             ECSSEEEEEEEEEBTTSCEEEEEEEEECTTS---CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE-------TTEEEEEEE
T ss_pred             cccCcEEEEEEEcccCCCCCEEEEEEEcccc---CHHHHHHHHHHHHHhcCCCCCceEEEEEEE-------CCEEEEEEe
Confidence            5999999999864   467899999986432   345678999999998 69999999998764       347889999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCC-CceEEeccccceeecc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDET-FKCNLSDFSTAKVSAV  159 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~-~~~kl~DFGla~~~~~  159 (340)
                      ||+||+|.+++.   .     +++.+++.+++||+.||+|||+  ++|+||||||+|||++.+ +++||+|||+|+...+
T Consensus       101 ~~~g~~L~~~~~---~-----l~~~~~~~~~~qll~al~ylH~--~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~  170 (361)
T 4f9c_A          101 YLEHESFLDILN---S-----LSFQEVREYMLNLFKALKRIHQ--FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD  170 (361)
T ss_dssp             CCCCCCHHHHHT---T-----CCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred             CCCcccHHHHHc---C-----CCHHHHHHHHHHHHHHHHHHHH--CCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence            999999999984   2     8999999999999999999999  889999999999999886 8999999999986543


Q ss_pred             cC-----------------------------CcceeeccceeeccCccccch-hh-hhHhHhCCcccccccccc
Q 019481          160 EN-----------------------------ADLTALDTSSVSAQSGKTGME-MK-MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       160 ~~-----------------------------~~~~~~gt~~~~~p~~~~~~~-~~-~~~~~s~g~~~~~~~~~~  202 (340)
                      ..                             ...+.+||+.|+|||.+.+.. +- ..|+||.|+..+.+.++.
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~  244 (361)
T 4f9c_A          171 TKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR  244 (361)
T ss_dssp             CSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTC
T ss_pred             ccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCC
Confidence            21                             123458999999997554422 22 236777666666665544

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=5.6e-44  Score=316.62  Aligned_cols=183  Identities=15%  Similarity=0.115  Sum_probs=136.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||+||+|++  +|+.||+|+++...  ......++|+..+.+++|||||++++++....   ......++|||||++
T Consensus        13 ~G~fG~Vy~~~~--~g~~VAvK~l~~~~--~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~---~~~~~~~lV~Ey~~~   85 (303)
T 3hmm_A           13 KGRFGEVWRGKW--RGEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAADNKDN---GTWTQLWLVSDYHEH   85 (303)
T ss_dssp             ECSSSEEEEEEE--TTEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC---SSSEEEEEEEECCTT
T ss_pred             eCCCeEEEEEEE--CCEEEEEEEECccc--hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecC---CCceEEEEEecCCCC
Confidence            589999999987  57899999996432  22233456777778899999999999775431   112257899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcC------CCceecCCCCCCcEEecCCCceEEeccccceeec
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSS------EKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~------~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      |||.++++...      ++++.+..++.|+++||+|||+.      .++|+||||||+|||+|.++++||+|||+|+...
T Consensus        86 gsL~~~l~~~~------l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~  159 (303)
T 3hmm_A           86 GSLFDYLNRYT------VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD  159 (303)
T ss_dssp             CBHHHHHHHCC------BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred             CcHHHHHHhCC------CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence            99999998643      89999999999999999999981      1279999999999999999999999999999876


Q ss_pred             ccCC-----cceeeccceeeccCccccc------hh-hhhHhHhCCcccccccc
Q 019481          159 VENA-----DLTALDTSSVSAQSGKTGM------EM-KMAQLESGGWRAHDEAE  200 (340)
Q Consensus       159 ~~~~-----~~~~~gt~~~~~p~~~~~~------~~-~~~~~~s~g~~~~~~~~  200 (340)
                      ....     ..+.+||+.|||||.+.+.      .+ ...|+||.|...+++.+
T Consensus       160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~t  213 (303)
T 3hmm_A          160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR  213 (303)
T ss_dssp             TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHH
Confidence            5432     2345799999999743221      11 12356666655555543

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=2.1e-43  Score=316.94  Aligned_cols=235  Identities=13%  Similarity=0.086  Sum_probs=183.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|++... ......+.+.+|++++++++||||+++++++.       +....+++|||++
T Consensus        25 ~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~-------~~~~~~lv~e~~~   97 (328)
T 3fe3_A           25 KGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIE-------TEKTLYLIMEYAS   97 (328)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-------CSSEEEEEECCCT
T ss_pred             eCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-------ECCEEEEEEECCC
Confidence            589999999999999999999999763 33455677899999999999999999999765       3447889999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +|+|.+++...+.     +++..++.++.||++||+|||+  ++|+||||||+|||++.++++||+|||+|+........
T Consensus        98 ~~~L~~~l~~~~~-----l~~~~~~~~~~qi~~al~~lH~--~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  170 (328)
T 3fe3_A           98 GGEVFDYLVAHGR-----MKEKEARSKFRQIVSAVQYCHQ--KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL  170 (328)
T ss_dssp             TCBHHHHHHHHCC-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGG
T ss_pred             CCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcc
Confidence            9999999988766     9999999999999999999999  88999999999999999999999999999887766666


Q ss_pred             ceeeccceeeccCccccchhh--hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          164 LTALDTSSVSAQSGKTGMEMK--MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~~--~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      .+.+||+.|+|||.+.+..+.  ..|+|+.|...+.+.++.  .||.......              ....      +..
T Consensus       171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~--~pf~~~~~~~--------------~~~~------i~~  228 (328)
T 3fe3_A          171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS--LPFDGQNLKE--------------LRER------VLR  228 (328)
T ss_dssp             GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSS--CSSCCSSHHH--------------HHHH------HHH
T ss_pred             ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCC--CCCCCCCHHH--------------HHHH------HHh
Confidence            778899999999765544432  356777666666655544  4433322110              1000      000


Q ss_pred             ccccccCcCCc-------cccccccccCCCCchHHHHhhcCccee
Q 019481          242 ITFLSALKITG-------CKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       242 ~~~~~~~~~p~-------~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                          ....+|.       ++...||+.||.+|||++++++|||+.
T Consensus       229 ----~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~  269 (328)
T 3fe3_A          229 ----GKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWIN  269 (328)
T ss_dssp             ----CCCCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTT
T ss_pred             ----CCCCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhc
Confidence                1112222       234467999999999999999999993

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=1.2e-42  Score=315.86  Aligned_cols=243  Identities=15%  Similarity=0.107  Sum_probs=179.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCch-----hhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPL-----QLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~-----~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      .|+||.||+|++..+++.||+|++++....     ...+.+.+|+++|++++||||++++++|.       +....+++|
T Consensus        22 ~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-------~~~~~~lv~   94 (361)
T 2yab_A           22 SGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYE-------NRTDVVLIL   94 (361)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEE-------CSSEEEEEE
T ss_pred             eCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEE-------eCCEEEEEE
Confidence            589999999999999999999999863322     13467899999999999999999999775       344788999


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC----ceEEeccccce
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF----KCNLSDFSTAK  155 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~----~~kl~DFGla~  155 (340)
                      ||++||+|.+++.....     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++    .+||+|||+++
T Consensus        95 e~~~gg~L~~~l~~~~~-----l~~~~~~~i~~qi~~aL~~LH~--~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~  167 (361)
T 2yab_A           95 ELVSGGELFDFLAQKES-----LSEEEATSFIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH  167 (361)
T ss_dssp             ECCCSCBHHHHHTTCSC-----CBHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred             EcCCCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence            99999999999987665     9999999999999999999999  8899999999999998877    79999999999


Q ss_pred             eecccCCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHH
Q 019481          156 VSAVENADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLL  234 (340)
Q Consensus       156 ~~~~~~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (340)
                      ...........+||+.|+||+.+.+..+- ..|+|+.|...+.+.++.  .||.......+...+..+...++..     
T Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~--~Pf~~~~~~~~~~~i~~~~~~~~~~-----  240 (361)
T 2yab_A          168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA--SPFLGDTKQETLANITAVSYDFDEE-----  240 (361)
T ss_dssp             ECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSC--CSSCCSSHHHHHHHHHTTCCCCCHH-----
T ss_pred             EcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCC--CCCCCCCHHHHHHHHHhcCCCCCch-----
Confidence            88776666678899999999644322211 235565555555444433  3333222111111111111100000     


Q ss_pred             HHHhhhhccccccCcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          235 IATLLSTITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       235 ~~~~~~~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                                 ..+.++   .++...||+.||.+|||++++++|||+.
T Consensus       241 -----------~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  277 (361)
T 2yab_A          241 -----------FFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT  277 (361)
T ss_dssp             -----------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTS
T ss_pred             -----------hccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcC
Confidence                       001111   2344578999999999999999999994

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=9.9e-42  Score=306.78  Aligned_cols=240  Identities=14%  Similarity=0.128  Sum_probs=189.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc--hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP--LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|++.....  ....+.+.+|+++++.++||||++++++|.+       ....+++|||+
T Consensus        19 ~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-------~~~~~lv~E~~   91 (336)
T 3h4j_B           19 EGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT-------PTDIVMVIEYA   91 (336)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC-------SSEEEEEECCC
T ss_pred             cCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-------CCEEEEEEECC
Confidence            58999999999999999999999974211  1224578899999999999999999997653       34678999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                       +|+|.+++.....     +++..++.++.||++||+|||+  ++|+||||||+|||++.++++||+|||+++....+..
T Consensus        92 -~g~l~~~l~~~~~-----l~~~~~~~i~~qi~~aL~~LH~--~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~  163 (336)
T 3h4j_B           92 -GGELFDYIVEKKR-----MTEDEGRRFFQQIICAIEYCHR--HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF  163 (336)
T ss_dssp             -CEEHHHHHHHHCS-----CCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT
T ss_pred             -CCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcc
Confidence             6899999987766     9999999999999999999999  7899999999999999999999999999998777766


Q ss_pred             cceeeccceeeccCccccchhh--hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK--MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~--~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      ..+.+||+.|+||+.+.+..+.  ..|+|+.|...+.+.++.  .||.......+...+..+....+......       
T Consensus       164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~--~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~-------  234 (336)
T 3h4j_B          164 LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGR--LPFDDEFIPNLFKKVNSCVYVMPDFLSPG-------  234 (336)
T ss_dssp             TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSS--CSSBCSSSTTCBCCCCSSCCCCCTTSCHH-------
T ss_pred             cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCC--CCCCCccHHHHHHHHHcCCCCCcccCCHH-------
Confidence            6778999999999877665542  468888888887776655  55555544444444443322221110000       


Q ss_pred             hccccccCcCCccccccccccCCCCchHHHHhhcCcce
Q 019481          241 TITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~~~~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                                ..++...||+.||.+|||++++++|||+
T Consensus       235 ----------~~~li~~~L~~dP~~Rpt~~eil~hp~~  262 (336)
T 3h4j_B          235 ----------AQSLIRRMIVADPMQRITIQEIRRDPWF  262 (336)
T ss_dssp             ----------HHHHHHTTSCSSGGGSCCHHHHTTCHHH
T ss_pred             ----------HHHHHHHHcCCChhHCcCHHHHHhChhh
Confidence                      0123447899999999999999999999

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=9.5e-42  Score=307.12  Aligned_cols=234  Identities=15%  Similarity=0.087  Sum_probs=177.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|+++.+++.||+|++++..  .....+.+.+|++++++++||||++++++|++       ....+++|||+
T Consensus        15 ~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-------~~~~~lv~E~~   87 (337)
T 1o6l_A           15 KGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-------HDRLCFVMEYA   87 (337)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC-------SSEEEEEEECC
T ss_pred             cCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe-------CCEEEEEEeCC
Confidence            5899999999999999999999997522  22345668899999999999999999997763       34788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec-ccC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA-VEN  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~-~~~  161 (340)
                      +||+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.+|++||+|||+|+... ...
T Consensus        88 ~gg~L~~~l~~~~~-----~~~~~~~~~~~qi~~aL~~LH~--~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~  160 (337)
T 1o6l_A           88 NGGELFFHLSRERV-----FTEERARFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA  160 (337)
T ss_dssp             TTCBHHHHHHHHSC-----CCHHHHHHHHHHHHHHHHHHHH--TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred             CCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence            99999999987665     9999999999999999999999  889999999999999999999999999998643 344


Q ss_pred             CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      ...+.+||+.|+|||...+.++- ..|+|+.|...+.+.++.  .||......              .....    ..  
T Consensus       161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~--~Pf~~~~~~--------------~~~~~----i~--  218 (337)
T 1o6l_A          161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE--------------RLFEL----IL--  218 (337)
T ss_dssp             CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSS--CSSCCSSHH--------------HHHHH----HH--
T ss_pred             cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCC--CCCCCCCHH--------------HHHHH----HH--
Confidence            45677899999999755443322 235666555555544433  333221110              00000    00  


Q ss_pred             hccccccCcCCcc-------ccccccccCCCCch-----HHHHhhcCcce
Q 019481          241 TITFLSALKITGC-------KSEEGYKNNSSLNP-----ICQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~~~~~p~~-------~~~~~l~~dP~~R~-----t~~~ll~hp~~  278 (340)
                          ...+..|..       +...||++||.+||     +++++++|||+
T Consensus       219 ----~~~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f  264 (337)
T 1o6l_A          219 ----MEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF  264 (337)
T ss_dssp             ----HCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGG
T ss_pred             ----cCCCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCc
Confidence                011222222       23467999999999     89999999999

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=7e-42  Score=306.32  Aligned_cols=242  Identities=12%  Similarity=0.043  Sum_probs=178.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|++...  ....+.+.+|+++++.++||||++++++|.+       ....+++|||++|
T Consensus        15 ~G~~g~Vy~~~~~~~~~~~a~K~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-------~~~~~lv~e~~~g   85 (321)
T 1tki_A           15 RGEFGIVHRCVETSSKKTYMAKFVKVK--GTDQVLVKKEISILNIARHRNILHLHESFES-------MEELVMIFEFISG   85 (321)
T ss_dssp             ECSSEEEEEEEETTTTEEEEEEEECCC--THHHHHHHHHHHHHHHSCCTTBCCEEEEEEE-------TTEEEEEECCCCC
T ss_pred             cCCCeEEEEEEECCCCcEEEEEEEecC--cccHHHHHHHHHHHHhCCCCCCCeEeEEEec-------CCEEEEEEEeCCC
Confidence            589999999999999999999999743  3445668899999999999999999997753       3478899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC--CCceEEeccccceeecccCC
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE--TFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~--~~~~kl~DFGla~~~~~~~~  162 (340)
                      |+|.+++.....    .+++..+..++.||+.||+|||+  ++|+||||||+|||++.  ++.+||+|||+++....+..
T Consensus        86 ~~L~~~l~~~~~----~~~~~~~~~i~~qi~~al~~lH~--~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~  159 (321)
T 1tki_A           86 LDIFERINTSAF----ELNEREIVSYVHQVCEALQFLHS--HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN  159 (321)
T ss_dssp             CBHHHHHTSSSC----CCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred             CCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHH--CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc
Confidence            999999987653    39999999999999999999999  88999999999999987  78999999999998877666


Q ss_pred             cceeeccceeeccCccccchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      .....||+.|+||+...+..+ ...|+|+.|...+.+.++.  .||.......+...+..+...++              
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~--~pf~~~~~~~~~~~i~~~~~~~~--------------  223 (321)
T 1tki_A          160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGI--NPFLAETNQQIIENIMNAEYTFD--------------  223 (321)
T ss_dssp             EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSS--CTTCCSSHHHHHHHHHHTCCCCC--------------
T ss_pred             cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCC--CCCcCCCHHHHHHHHHcCCCCCC--------------
Confidence            667789999999964433221 1345666555555554443  33322211111000000000000              


Q ss_pred             ccccccCcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          242 ITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       242 ~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                        ....+.++   .++...||+.||.+|||++++++|||+.
T Consensus       224 --~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~  262 (321)
T 1tki_A          224 --EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLK  262 (321)
T ss_dssp             --HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred             --hhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhc
Confidence              00001122   2334578999999999999999999994

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=4.5e-42  Score=311.19  Aligned_cols=234  Identities=17%  Similarity=0.113  Sum_probs=168.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||+|+++.+++.||+|++++..  .....+.+.+|.++++.+ +||||++++++|.       +....+++|||
T Consensus        33 ~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~-------~~~~~~lv~E~  105 (353)
T 3txo_A           33 KGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQ-------TPDRLFFVMEF  105 (353)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEE-------CSSEEEEEEEC
T ss_pred             eCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEE-------eCCEEEEEEeC
Confidence            5899999999999999999999997521  223456688999999998 6999999999775       34478899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec-cc
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA-VE  160 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~-~~  160 (340)
                      ++||+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.+|++||+|||+|+... ..
T Consensus       106 ~~gg~L~~~l~~~~~-----~~~~~~~~~~~qi~~aL~~LH~--~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~  178 (353)
T 3txo_A          106 VNGGDLMFHIQKSRR-----FDEARARFYAAEIISALMFLHD--KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG  178 (353)
T ss_dssp             CCSCBHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHH--TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--
T ss_pred             CCCCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCCcccCCCHHHEEECCCCCEEEccccceeecccCC
Confidence            999999999988766     9999999999999999999999  889999999999999999999999999998643 33


Q ss_pred             CCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      ....+.+||+.|+|||.+.+..+- ..|+|+.|...+.+.++.  .||.......+...+                  . 
T Consensus       179 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~--~Pf~~~~~~~~~~~i------------------~-  237 (353)
T 3txo_A          179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGH--APFEAENEDDLFEAI------------------L-  237 (353)
T ss_dssp             -------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSS--CSSCCSSHHHHHHHH------------------H-
T ss_pred             ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCC--CCCCCCCHHHHHHHH------------------H-
Confidence            445677899999999643322211 224555444444443333  333222111100000                  0 


Q ss_pred             hhccccccCcCCcc-------ccccccccCCCCchHH------HHhhcCcce
Q 019481          240 STITFLSALKITGC-------KSEEGYKNNSSLNPIC------QIVNQHPFY  278 (340)
Q Consensus       240 ~~~~~~~~~~~p~~-------~~~~~l~~dP~~R~t~------~~ll~hp~~  278 (340)
                           ...+..|..       +...||++||.+||++      +++++|||+
T Consensus       238 -----~~~~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f  284 (353)
T 3txo_A          238 -----NDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFF  284 (353)
T ss_dssp             -----HCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGG
T ss_pred             -----cCCCCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcc
Confidence                 011122222       3346799999999998      899999999

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=7.9e-41  Score=306.74  Aligned_cols=243  Identities=15%  Similarity=0.153  Sum_probs=175.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||+|+++.+++.||+|++++..  .....+.+.+|..+++++ +||||++++++|++       ....+++|||
T Consensus        62 ~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~-------~~~~~lV~E~  134 (396)
T 4dc2_A           62 RGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-------ESRLFFVIEY  134 (396)
T ss_dssp             ECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEEC-------SSEEEEEEEC
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEE-------CCEEEEEEEc
Confidence            5899999999999999999999998532  223345578999999887 89999999997763       4478899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee-eccc
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV-SAVE  160 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~-~~~~  160 (340)
                      ++||+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.+|++||+|||+|+. ....
T Consensus       135 ~~gg~L~~~l~~~~~-----l~~~~~~~~~~qi~~aL~~LH~--~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~  207 (396)
T 4dc2_A          135 VNGGDLMFHMQRQRK-----LPEEHARFYSAEISLALNYLHE--RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG  207 (396)
T ss_dssp             CTTCBHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHH--TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred             CCCCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCEEeccCCHHHEEECCCCCEEEeecceeeecccCC
Confidence            999999999998766     9999999999999999999999  8899999999999999999999999999986 3345


Q ss_pred             CCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      ....+.+||+.|+||+.+.+.++- ..|+|+.|...+.+.++.  .||.........     .... ......     . 
T Consensus       208 ~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~--~Pf~~~~~~~~~-----~~~~-~~~~~~-----~-  273 (396)
T 4dc2_A          208 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR--SPFDIVGSSDNP-----DQNT-EDYLFQ-----V-  273 (396)
T ss_dssp             CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS--CSSTTTTC-----------CC-HHHHHH-----H-
T ss_pred             CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCC--CCCccccccccc-----chhh-HHHHHH-----H-
Confidence            556678999999999644432222 235555555554444433  332211100000     0000 000000     0 


Q ss_pred             hhccccccCcCCccc-------cccccccCCCCchHH------HHhhcCcce
Q 019481          240 STITFLSALKITGCK-------SEEGYKNNSSLNPIC------QIVNQHPFY  278 (340)
Q Consensus       240 ~~~~~~~~~~~p~~~-------~~~~l~~dP~~R~t~------~~ll~hp~~  278 (340)
                         .....+.+|..+       ...||++||.+|+++      +++++|||+
T Consensus       274 ---i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff  322 (396)
T 4dc2_A          274 ---ILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF  322 (396)
T ss_dssp             ---HHHCCCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTT
T ss_pred             ---HhccccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccc
Confidence               011123333333       346799999999985      799999999

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=2e-41  Score=304.03  Aligned_cols=239  Identities=18%  Similarity=0.116  Sum_probs=177.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCch-----hhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPL-----QLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~-----~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      .|+||.||+|++..+++.||+|+++.....     ...+.+.+|++++++++||||++++++|.       +....+++|
T Consensus        21 ~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-------~~~~~~lv~   93 (326)
T 2y0a_A           21 SGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE-------NKTDVILIL   93 (326)
T ss_dssp             CCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE-------CSSEEEEEE
T ss_pred             eCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEE-------eCCEEEEEE
Confidence            689999999999999999999999863221     13567899999999999999999999775       344788999


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC----ceEEeccccce
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF----KCNLSDFSTAK  155 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~----~~kl~DFGla~  155 (340)
                      ||+++|+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++    .+||+|||+++
T Consensus        94 e~~~~~~L~~~l~~~~~-----~~~~~~~~i~~qi~~al~~lH~--~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~  166 (326)
T 2y0a_A           94 ELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH  166 (326)
T ss_dssp             ECCCSCBHHHHHTTSSC-----CBHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             EcCCCCCHHHHHHhcCC-----cCHHHHHHHHHHHHHHHHHHHH--CCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence            99999999999987655     9999999999999999999999  8899999999999999887    89999999999


Q ss_pred             eecccCCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHH
Q 019481          156 VSAVENADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLL  234 (340)
Q Consensus       156 ~~~~~~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (340)
                      ...........+||+.|+||+...+..+. ..|+|+.|...+.+.++.  .||........             ..    
T Consensus       167 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~--~pf~~~~~~~~-------------~~----  227 (326)
T 2y0a_A          167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA--SPFLGDTKQET-------------LA----  227 (326)
T ss_dssp             ECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSC--CSSCCSSHHHH-------------HH----
T ss_pred             ECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCc--CCCCCCCHHHH-------------HH----
Confidence            88766555667899999998643322111 235555555554444333  23222111000             00    


Q ss_pred             HHHhhhhcccccc----CcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          235 IATLLSTITFLSA----LKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       235 ~~~~~~~~~~~~~----~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                         ..........    +..+   .++...||+.||.+|||++++++|||+.
T Consensus       228 ---~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  276 (326)
T 2y0a_A          228 ---NVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK  276 (326)
T ss_dssp             ---HHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTS
T ss_pred             ---HHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCcc
Confidence               0000011000    1111   1234578999999999999999999993

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=1.4e-41  Score=316.64  Aligned_cols=241  Identities=14%  Similarity=0.028  Sum_probs=174.4

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|++.... .....+.+.+|++++++++||||++++++|.       +....+++|||++
T Consensus        21 ~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-------~~~~~~lv~E~~~   93 (444)
T 3soa_A           21 KGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSIS-------EEGHHYLIFDLVT   93 (444)
T ss_dssp             EC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEE-------CSSEEEEEECCCB
T ss_pred             cCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEE-------ECCEEEEEEEeCC
Confidence            5899999999999999999999998633 3345677899999999999999999999765       4457889999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEec---CCCceEEeccccceeeccc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLD---ETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~---~~~~~kl~DFGla~~~~~~  160 (340)
                      ||+|.+.+.....     +++..+..++.||++||+|||+  ++|+||||||+|||++   .++.+||+|||+|+.....
T Consensus        94 gg~L~~~i~~~~~-----~~e~~~~~i~~qil~aL~~lH~--~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~  166 (444)
T 3soa_A           94 GGELFEDIVAREY-----YSEADASHCIQQILEAVLHCHQ--MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE  166 (444)
T ss_dssp             CCBHHHHHHHCSC-----CCHHHHHHHHHHHHHHHHHHHH--TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT
T ss_pred             CCCHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC
Confidence            9999999988765     9999999999999999999999  8899999999999998   4688999999999877654


Q ss_pred             CC-cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHh
Q 019481          161 NA-DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATL  238 (340)
Q Consensus       161 ~~-~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (340)
                      .. ....+||+.|+|||...+..+- ..|+|+.|...+.+.++.  .||.......+              ...    ..
T Consensus       167 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~--~Pf~~~~~~~~--------------~~~----i~  226 (444)
T 3soa_A          167 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGY--PPFWDEDQHRL--------------YQQ----IK  226 (444)
T ss_dssp             CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS--CSCCCSSHHHH--------------HHH----HH
T ss_pred             CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCC--CCCCCccHHHH--------------HHH----HH
Confidence            33 3456899999999644332211 235555555554444333  33222111000              000    00


Q ss_pred             hhhcccccc--CcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          239 LSTITFLSA--LKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       239 ~~~~~~~~~--~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      .....+...  +.++   .++...||+.||.+|||++++++|||+.
T Consensus       227 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~  272 (444)
T 3soa_A          227 AGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWIS  272 (444)
T ss_dssp             HTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTH
T ss_pred             hCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCcccc
Confidence            000011000  1111   1234478999999999999999999993

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=1.1e-41  Score=310.04  Aligned_cols=241  Identities=13%  Similarity=0.061  Sum_probs=177.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|+++.. ......+.+.+|++++++++||||++++++|.       +....+++|||++
T Consensus        39 ~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-------~~~~~~lv~e~~~  111 (362)
T 2bdw_A           39 KGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ-------EESFHYLVFDLVT  111 (362)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-------CSSEEEEEECCCC
T ss_pred             cCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-------eCCEEEEEEecCC
Confidence            589999999999999999999999863 23445677899999999999999999999765       4447789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC---ceEEeccccceeeccc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF---KCNLSDFSTAKVSAVE  160 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~---~~kl~DFGla~~~~~~  160 (340)
                      +|+|.+.+.....     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++   .+||+|||+++.....
T Consensus       112 gg~L~~~l~~~~~-----~~~~~~~~~~~qi~~al~~lH~--~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~  184 (362)
T 2bdw_A          112 GGELFEDIVAREF-----YSEADASHCIQQILESIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS  184 (362)
T ss_dssp             SCBHHHHHTTCSC-----CCHHHHHHHHHHHHHHHHHHHH--TTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred             CCCHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence            9999999987665     9999999999999999999999  8899999999999998654   5999999999887766


Q ss_pred             CCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      ......+||+.|+|||.+.+..+. ..|+|+.|...+.+.++.  .||.......              ....    ...
T Consensus       185 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~--~Pf~~~~~~~--------------~~~~----i~~  244 (362)
T 2bdw_A          185 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY--PPFWDEDQHR--------------LYAQ----IKA  244 (362)
T ss_dssp             CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS--CSSCCSSHHH--------------HHHH----HHH
T ss_pred             cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCC--CCCCCCCHHH--------------HHHH----HHh
Confidence            555667899999999644332211 235555555554444333  3322211100              0000    000


Q ss_pred             hhcccccc--CcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          240 STITFLSA--LKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       240 ~~~~~~~~--~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ....+...  ..++   .++...||+.||.+|||++++++|||+.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  289 (362)
T 2bdw_A          245 GAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWIC  289 (362)
T ss_dssp             TCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHH
T ss_pred             CCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccC
Confidence            00000000  1111   1234478999999999999999999994

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=1.4e-40  Score=298.82  Aligned_cols=246  Identities=15%  Similarity=0.149  Sum_probs=173.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccc----------------
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICL----------------   68 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~----------------   68 (340)
                      .|+||.||+|++..+++.||+|+++........+.+.+|++++++++||||++++++|......                
T Consensus        16 ~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (332)
T 3qd2_B           16 RGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDEST   95 (332)
T ss_dssp             CC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC--------
T ss_pred             CCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhccccc
Confidence            6899999999999999999999998655555667899999999999999999999987543210                


Q ss_pred             ----------------------------------cCCcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHH
Q 019481           69 ----------------------------------TGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKM  114 (340)
Q Consensus        69 ----------------------------------~~~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi  114 (340)
                                                        .....+.+++|||+++|+|.+++.....  ....++..++.++.||
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~i~~qi  173 (332)
T 3qd2_B           96 DWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS--LEDREHGVCLHIFIQI  173 (332)
T ss_dssp             ------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS--GGGSCHHHHHHHHHHH
T ss_pred             cccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC--ccchhhHHHHHHHHHH
Confidence                                              0223358899999999999999998765  2446777899999999


Q ss_pred             HHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-------------CcceeeccceeeccCccccc
Q 019481          115 CQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-------------ADLTALDTSSVSAQSGKTGM  181 (340)
Q Consensus       115 ~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-------------~~~~~~gt~~~~~p~~~~~~  181 (340)
                      +.||+|||+  ++|+||||||+|||++.++.+||+|||+++......             .....+||+.|+||+...+.
T Consensus       174 ~~aL~~LH~--~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  251 (332)
T 3qd2_B          174 AEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGN  251 (332)
T ss_dssp             HHHHHHHHH--TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCC
T ss_pred             HHHHHHHHh--CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCC
Confidence            999999999  889999999999999999999999999998876542             12334688888888533221


Q ss_pred             hhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhcccccc----CcCCccccc
Q 019481          182 EMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTITFLSA----LKITGCKSE  256 (340)
Q Consensus       182 ~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~p~~~~~  256 (340)
                      .+. ..|+|+                     +|++..++.++..++...........   .......    +.--..+..
T Consensus       252 ~~~~~~Di~s---------------------lG~il~el~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~  307 (332)
T 3qd2_B          252 NYSHKVDIFS---------------------LGLILFELLYSFSTQMERVRIITDVR---NLKFPLLFTQKYPQEHMMVQ  307 (332)
T ss_dssp             CCCTHHHHHH---------------------HHHHHHHHHSCCCCHHHHHHHHHHHH---TTCCCHHHHHHCHHHHHHHH
T ss_pred             CCcchhhHHH---------------------HHHHHHHHHHcCCChhHHHHHHHHhh---ccCCCcccccCChhHHHHHH
Confidence            111 123443                     44444444443333332222111100   0000000    000022345


Q ss_pred             cccccCCCCchHHHHhhcCcce
Q 019481          257 EGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       257 ~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .||+.||.+|||++++++|||+
T Consensus       308 ~~l~~~p~~Rps~~~~l~~~~f  329 (332)
T 3qd2_B          308 DMLSPSPTERPEATDIIENAIF  329 (332)
T ss_dssp             HHHCSSGGGSCCHHHHHHSTTC
T ss_pred             HHccCCCCcCCCHHHHhhchhh
Confidence            7899999999999999999999

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=3.7e-40  Score=301.22  Aligned_cols=237  Identities=17%  Similarity=0.112  Sum_probs=181.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|++.+..  .....+.+.+|+++|++++||||++++++|.       +....+++|||+
T Consensus        25 ~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-------~~~~~~lv~e~~   97 (384)
T 4fr4_A           25 KGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQ-------DEEDMFMVVDLL   97 (384)
T ss_dssp             CCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE-------CSSEEEEEECCC
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-------eCCEEEEEEecC
Confidence            6899999999999999999999997522  2233567889999999999999999999776       344778999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      +||+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.+|++||+|||+|+.+.....
T Consensus        98 ~gg~L~~~l~~~~~-----l~~~~~~~~~~qi~~aL~~LH~--~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~  170 (384)
T 4fr4_A           98 LGGDLRYHLQQNVH-----FKEETVKLFICELVMALDYLQN--QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ  170 (384)
T ss_dssp             TTEEHHHHHHTTCC-----CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred             CCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCceeccCcHHHeEECCCCCEEEeccceeeeccCCCc
Confidence            99999999998765     9999999999999999999999  8899999999999999999999999999998877777


Q ss_pred             cceeeccceeeccCccccc---hh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHh
Q 019481          163 DLTALDTSSVSAQSGKTGM---EM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATL  238 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~---~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (340)
                      ..+.+||+.|+||+.+.+.   ++ ...|+|+.|...+.+.++.  .||......           ........   . .
T Consensus       171 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~--~Pf~~~~~~-----------~~~~~~~~---~-~  233 (384)
T 4fr4_A          171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR--RPYHIRSST-----------SSKEIVHT---F-E  233 (384)
T ss_dssp             BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSS--CSSCCCTTS-----------CHHHHHHH---H-H
T ss_pred             eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCC--CCCCCCCCc-----------cHHHHHHH---H-h
Confidence            7788999999999765421   11 1346777666666655544  333211110           00000000   0 0


Q ss_pred             hhhccccccCcCCcc-------ccccccccCCCCchH-HHHhhcCcce
Q 019481          239 LSTITFLSALKITGC-------KSEEGYKNNSSLNPI-CQIVNQHPFY  278 (340)
Q Consensus       239 ~~~~~~~~~~~~p~~-------~~~~~l~~dP~~R~t-~~~ll~hp~~  278 (340)
                            ...+..|..       +...||+.||.+||+ ++++++|||+
T Consensus       234 ------~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f  275 (384)
T 4fr4_A          234 ------TTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYM  275 (384)
T ss_dssp             ------HCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGG
T ss_pred             ------hcccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhh
Confidence                  011222222       234679999999999 8999999999

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=4.9e-41  Score=300.25  Aligned_cols=232  Identities=17%  Similarity=0.149  Sum_probs=172.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|++++..  .....+.+.+|..+++.++||||++++++|.       +....+++|||+
T Consensus        16 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-------~~~~~~lv~e~~   88 (318)
T 1fot_A           16 TGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQ-------DAQQIFMIMDYI   88 (318)
T ss_dssp             ECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEE-------CSSEEEEEECCC
T ss_pred             eCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEE-------eCCEEEEEEeCC
Confidence            5899999999999999999999997522  1233566789999999999999999999775       344788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      +||+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.+|++||+|||+++....  .
T Consensus        89 ~gg~L~~~l~~~~~-----~~~~~~~~~~~qi~~aL~~LH~--~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~--~  159 (318)
T 1fot_A           89 EGGELFSLLRKSQR-----FPNPVAKFYAAEVCLALEYLHS--KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD--V  159 (318)
T ss_dssp             CSCBHHHHHHHTSS-----CCHHHHHHHHHHHHHHHHHHHT--TTEECCCCCGGGEEECTTSCEEECCCSSCEECSS--C
T ss_pred             CCCCHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCccccCCChheEEEcCCCCEEEeecCcceecCC--c
Confidence            99999999988665     9999999999999999999999  8899999999999999999999999999987643  3


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      ..+.+||+.|+|||...+.++. ..|+|+.|...+.+.+                     |..||.......... .+..
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~---------------------g~~pf~~~~~~~~~~-~i~~  217 (318)
T 1fot_A          160 TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLA---------------------GYTPFYDSNTMKTYE-KILN  217 (318)
T ss_dssp             BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHH---------------------SSCTTCCSSHHHHHH-HHHH
T ss_pred             cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHh---------------------CCCCCCCCCHHHHHH-HHHh
Confidence            4467899999988543322211 2244444444444333                     333321110000000 0000


Q ss_pred             ccccccCcCCcc-------ccccccccCCCCch-----HHHHhhcCcce
Q 019481          242 ITFLSALKITGC-------KSEEGYKNNSSLNP-----ICQIVNQHPFY  278 (340)
Q Consensus       242 ~~~~~~~~~p~~-------~~~~~l~~dP~~R~-----t~~~ll~hp~~  278 (340)
                          .....|..       +...||++||++|+     +++++++|||+
T Consensus       218 ----~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f  262 (318)
T 1fot_A          218 ----AELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWF  262 (318)
T ss_dssp             ----CCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGG
T ss_pred             ----CCCCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccc
Confidence                11122222       23467999999999     89999999999

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=2.8e-41  Score=304.93  Aligned_cols=234  Identities=16%  Similarity=0.089  Sum_probs=174.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||+|+++.+++.||+|++++..  .....+.+.+|.++++.+ +||||++++++|+       +....+++|||
T Consensus        27 ~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~-------~~~~~~lv~E~   99 (345)
T 1xjd_A           27 KGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ-------TKENLFFVMEY   99 (345)
T ss_dssp             ECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEE-------CSSEEEEEEEC
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEE-------eCCEEEEEEeC
Confidence            5899999999999999999999997521  123346678899999987 8999999999776       34478899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc-c
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-E  160 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-~  160 (340)
                      ++||+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.+|++||+|||+|+.... .
T Consensus       100 ~~gg~L~~~l~~~~~-----~~~~~~~~~~~qi~~aL~~LH~--~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~  172 (345)
T 1xjd_A          100 LNGGDLMYHIQSCHK-----FDLSRATFYAAEIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD  172 (345)
T ss_dssp             CTTCBHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHH--TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred             CCCCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC
Confidence            999999999988665     9999999999999999999999  8899999999999999999999999999986543 3


Q ss_pred             CCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      ....+.+||+.|+||+...+.++. ..|+|+.|...+.+.++.  .||.......              ....    .. 
T Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~--~Pf~~~~~~~--------------~~~~----i~-  231 (345)
T 1xjd_A          173 AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQDEEE--------------LFHS----IR-  231 (345)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS--CSSCCSSHHH--------------HHHH----HH-
T ss_pred             CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCC--CCCCCCCHHH--------------HHHH----HH-
Confidence            345677899999999644332221 235555555554444333  3322211100              0000    00 


Q ss_pred             hhccccccCcCCcc-------ccccccccCCCCchHHH-HhhcCcce
Q 019481          240 STITFLSALKITGC-------KSEEGYKNNSSLNPICQ-IVNQHPFY  278 (340)
Q Consensus       240 ~~~~~~~~~~~p~~-------~~~~~l~~dP~~R~t~~-~ll~hp~~  278 (340)
                           ...+..|..       +...||++||++||++. ++++|||+
T Consensus       232 -----~~~~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f  273 (345)
T 1xjd_A          232 -----MDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLF  273 (345)
T ss_dssp             -----HCCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGG
T ss_pred             -----hCCCCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccc
Confidence                 011222322       23467999999999998 99999999

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=7.2e-40  Score=295.96  Aligned_cols=243  Identities=16%  Similarity=0.142  Sum_probs=175.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc--CchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI--TPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||+|+++.+++.||+|++++.  ......+.+.+|..+++++ +||||++++++|.+       ....+++|||
T Consensus        19 ~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~-------~~~~~lv~e~   91 (345)
T 3a8x_A           19 RGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-------ESRLFFVIEY   91 (345)
T ss_dssp             ECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-------SSEEEEEECC
T ss_pred             ecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe-------CCEEEEEEeC
Confidence            589999999999999999999999863  2334556788999999998 89999999997753       4478899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec-cc
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA-VE  160 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~-~~  160 (340)
                      ++||+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.+|++||+|||+|+... ..
T Consensus        92 ~~gg~L~~~l~~~~~-----l~~~~~~~~~~qi~~aL~~LH~--~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~  164 (345)
T 3a8x_A           92 VNGGDLMFHMQRQRK-----LPEEHARFYSAEISLALNYLHE--RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG  164 (345)
T ss_dssp             CCSCBHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHH--TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred             CCCCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence            999999999987665     9999999999999999999999  889999999999999999999999999998643 34


Q ss_pred             CCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      ....+.+||+.|+|||...+.++- ..|+|+.|...+.+.++.  .||.......        ..........   ...+
T Consensus       165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~--~pf~~~~~~~--------~~~~~~~~~~---~~~i  231 (345)
T 3a8x_A          165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR--SPFDIVGSSD--------NPDQNTEDYL---FQVI  231 (345)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS--CTTTTTTC---------------CHHHH---HHHH
T ss_pred             CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCC--CCcCCccccc--------ccccccHHHH---HHHH
Confidence            445677899999999644332221 235555555554444333  2322110000        0000000000   0000


Q ss_pred             hhccccccCcCCccc-------cccccccCCCCchHH------HHhhcCcce
Q 019481          240 STITFLSALKITGCK-------SEEGYKNNSSLNPIC------QIVNQHPFY  278 (340)
Q Consensus       240 ~~~~~~~~~~~p~~~-------~~~~l~~dP~~R~t~------~~ll~hp~~  278 (340)
                          ....+.+|..+       ...||++||.+||++      +++++|||+
T Consensus       232 ----~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f  279 (345)
T 3a8x_A          232 ----LEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF  279 (345)
T ss_dssp             ----HHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGG
T ss_pred             ----HcCCCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCcc
Confidence                01112233333       346799999999996      799999999

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=6.1e-41  Score=314.35  Aligned_cols=239  Identities=13%  Similarity=0.123  Sum_probs=182.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc--hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP--LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|+++....  ....+.+.+|+++++.++||||+++++++.       +....+++|||+
T Consensus        26 ~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~-------~~~~~~lv~E~~   98 (476)
T 2y94_A           26 VGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIS-------TPSDIFMVMEYV   98 (476)
T ss_dssp             CCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEE-------CSSEEEEEEECC
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-------ECCEEEEEEeCC
Confidence            68999999999999999999999975221  123467899999999999999999999765       344788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      ++|+|.+++...+.     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++++||+|||+++.......
T Consensus        99 ~gg~L~~~l~~~~~-----l~~~~~~~i~~qi~~aL~~LH~--~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~  171 (476)
T 2y94_A           99 SGGELFDYICKNGR-----LDEKESRRLFQQILSGVDYCHR--HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF  171 (476)
T ss_dssp             SSEEHHHHTTSSSS-----CCHHHHHHHHHHHHHHHHHHHT--TTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC
T ss_pred             CCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCCCcccccHHHEEEecCCCeEEEeccchhhcccccc
Confidence            99999999987665     9999999999999999999999  8899999999999999999999999999998877666


Q ss_pred             cceeeccceeeccCccccchh--hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      ..+.+||+.|+|||...+..+  ...|+|+.|...+.+.++.  .||.......+...+..                   
T Consensus       172 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~--~Pf~~~~~~~~~~~i~~-------------------  230 (476)
T 2y94_A          172 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGT--LPFDDDHVPTLFKKICD-------------------  230 (476)
T ss_dssp             BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSS--CSSCCSSSHHHHHHHHT-------------------
T ss_pred             ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCC--CCCCCCCHHHHHHHHhc-------------------
Confidence            667889999999976554332  2357777666666655544  44333222111000000                   


Q ss_pred             hccccccCcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          241 TITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       241 ~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                       ..+..+...+   .++...||+.||.+|||++++++|||+.
T Consensus       231 -~~~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~  271 (476)
T 2y94_A          231 -GIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFK  271 (476)
T ss_dssp             -TCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHH
T ss_pred             -CCcCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhh
Confidence             0011111111   1234467999999999999999999993

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=1.3e-40  Score=298.32  Aligned_cols=242  Identities=14%  Similarity=0.069  Sum_probs=177.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|+++........+.+.+|+.+++.++||||+++++++.       +....+++|||+++
T Consensus        17 ~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-------~~~~~~lv~e~~~~   89 (323)
T 3tki_A           17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-------EGNIQYLFLEYCSG   89 (323)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEE-------CSSEEEEEEECCTT
T ss_pred             cCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEe-------cCCeEEEEEEcCCC
Confidence            58999999999999999999999976544445577899999999999999999999765       44477899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC---
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN---  161 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~---  161 (340)
                      |+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.+....   
T Consensus        90 ~~L~~~l~~~~~-----~~~~~~~~i~~qi~~aL~~LH~--~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  162 (323)
T 3tki_A           90 GELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER  162 (323)
T ss_dssp             EEGGGGSBTTTB-----CCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred             CcHHHHHhhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence            999999987665     9999999999999999999999  889999999999999999999999999998765332   


Q ss_pred             CcceeeccceeeccCccccchh--hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      .....+||+.|+|||.+.+.+.  ...|+|+.|...+.+.++.  .||........            .....     ..
T Consensus       163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~--~pf~~~~~~~~------------~~~~~-----~~  223 (323)
T 3tki_A          163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQ------------EYSDW-----KE  223 (323)
T ss_dssp             CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSS--CSCSSSCTTSH------------HHHHH-----HT
T ss_pred             ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCC--CCCCCCchHHH------------HHHHH-----hc
Confidence            2345679999999976554433  2357777777777666555  33322111000            00000     00


Q ss_pred             hhccccccCcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          240 STITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       240 ~~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ..........++   ..+...||+.||++|||++++++|||+.
T Consensus       224 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~  266 (323)
T 3tki_A          224 KKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN  266 (323)
T ss_dssp             TCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTT
T ss_pred             ccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhc
Confidence            000000001111   1234478999999999999999999994

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=5e-40  Score=291.17  Aligned_cols=238  Identities=18%  Similarity=0.105  Sum_probs=172.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||++++++|..       ....+++|||+++
T Consensus        30 ~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~~~~lv~e~~~~  101 (297)
T 3fxz_A           30 QGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLV-------GDELWVVMEYLAG  101 (297)
T ss_dssp             EETTEEEEEEEBTTTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------TTEEEEEEECCTT
T ss_pred             cCCCeEEEEEEECCCCcEEEEEEeeccc-ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEE-------CCEEEEEEECCCC
Confidence            5899999999999999999999997532 2335668899999999999999999997763       3367899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-Cc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-AD  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~~  163 (340)
                      |+|.+++....      +++..+..++.|++.||+|||+  ++|+||||||+|||++.++++||+|||+++...... ..
T Consensus       102 ~~L~~~~~~~~------~~~~~~~~~~~qi~~~l~~lH~--~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  173 (297)
T 3fxz_A          102 GSLTDVVTETC------MDEGQIAAVCRECLQALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR  173 (297)
T ss_dssp             CBHHHHHHHSC------CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred             CCHHHHHhhcC------CCHHHHHHHHHHHHHHHHHHHh--CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccccc
Confidence            99999998643      8999999999999999999999  889999999999999999999999999998776543 33


Q ss_pred             ceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHh--hh
Q 019481          164 LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATL--LS  240 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~  240 (340)
                      ...+||+.|+||+.+.+..+. ..|+|+.|...+.+.++                     ..||............  ..
T Consensus       174 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g---------------------~~pf~~~~~~~~~~~~~~~~  232 (297)
T 3fxz_A          174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG---------------------EPPYLNENPLRALYLIATNG  232 (297)
T ss_dssp             CCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHS---------------------SCTTTTSCHHHHHHHHHHHC
T ss_pred             CCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhC---------------------CCCCCCCCHHHHHHHHHhCC
Confidence            456789999988643322211 23455544444444333                     3332211111000000  00


Q ss_pred             hccccccCcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          241 TITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       241 ~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ..........+   .++...||+.||.+|||++++++|||+.
T Consensus       233 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~  274 (297)
T 3fxz_A          233 TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLK  274 (297)
T ss_dssp             SCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGG
T ss_pred             CCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhc
Confidence            00111111112   1234478999999999999999999993

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=9.7e-41  Score=302.17  Aligned_cols=232  Identities=14%  Similarity=0.108  Sum_probs=174.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|++++..  .....+.+.+|++++++++||||++++++|.       +....+++|||+
T Consensus        51 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-------~~~~~~lv~e~~  123 (350)
T 1rdq_E           51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK-------DNSNLYMVMEYV  123 (350)
T ss_dssp             ECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE-------CSSEEEEEEECC
T ss_pred             cCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-------cCCEEEEEEcCC
Confidence            5899999999999999999999997522  1234567889999999999999999999775       344788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      +||+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.+|++||+|||+++.....  
T Consensus       124 ~gg~L~~~l~~~~~-----~~~~~~~~~~~qi~~aL~~LH~--~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~--  194 (350)
T 1rdq_E          124 AGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--  194 (350)
T ss_dssp             TTCBHHHHHHHHCC-----CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred             CCCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCcccccCccceEEECCCCCEEEcccccceeccCC--
Confidence            99999999998765     9999999999999999999999  88999999999999999999999999999876543  


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      ..+.+||+.|+||+.+.+.++. ..|+|+.|...+.+.++.  .||.......+             ....     .  .
T Consensus       195 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~--~Pf~~~~~~~~-------------~~~i-----~--~  252 (350)
T 1rdq_E          195 TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGY--PPFFADQPIQI-------------YEKI-----V--S  252 (350)
T ss_dssp             BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS--CSSCCSSHHHH-------------HHHH-----H--H
T ss_pred             cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCC--CCCCCCCHHHH-------------HHHH-----H--c
Confidence            4467899999999644332222 235555555554444433  33222111000             0000     0  0


Q ss_pred             ccccccCcCCcc-------ccccccccCCCCchH-----HHHhhcCcce
Q 019481          242 ITFLSALKITGC-------KSEEGYKNNSSLNPI-----CQIVNQHPFY  278 (340)
Q Consensus       242 ~~~~~~~~~p~~-------~~~~~l~~dP~~R~t-----~~~ll~hp~~  278 (340)
                          ..+..|..       +...||+.||.+||+     ++++++|||+
T Consensus       253 ----~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f  297 (350)
T 1rdq_E          253 ----GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF  297 (350)
T ss_dssp             ----CCCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGG
T ss_pred             ----CCCCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCc
Confidence                11122222       234679999999998     9999999999

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=2.9e-41  Score=319.03  Aligned_cols=241  Identities=15%  Similarity=0.117  Sum_probs=176.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|++.+. ......+.+.+|++++++++||||++++++|.       +....++++||++
T Consensus        32 ~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-------~~~~~~lv~e~~~  104 (486)
T 3mwu_A           32 KGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE-------DSSSFYIVGELYT  104 (486)
T ss_dssp             CCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEE-------CSSEEEEEECCCC
T ss_pred             ecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEE-------cCCEEEEEEEcCC
Confidence            699999999999999999999999752 12234567899999999999999999999765       4457889999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEec---CCCceEEeccccceeeccc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLD---ETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~---~~~~~kl~DFGla~~~~~~  160 (340)
                      +|+|.+.+.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++   .++.+||+|||+|+.....
T Consensus       105 ~~~L~~~~~~~~~-----~~~~~~~~i~~qi~~al~~lH~--~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~  177 (486)
T 3mwu_A          105 GGELFDEIIKRKR-----FSEHDAARIIKQVFSGITYMHK--HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN  177 (486)
T ss_dssp             SCBHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred             CCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence            9999999987765     9999999999999999999999  8899999999999995   4567999999999877666


Q ss_pred             CCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      ......+||+.|+||+.+.+.--...|+|+.|...+.+.++.  .||.......+              ...    ....
T Consensus       178 ~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~--~pf~~~~~~~~--------------~~~----i~~~  237 (486)
T 3mwu_A          178 TKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGT--PPFYGKNEYDI--------------LKR----VETG  237 (486)
T ss_dssp             ----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSS--CSSCCSSHHHH--------------HHH----HHHT
T ss_pred             CccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCC--CCCCCCCHHHH--------------HHH----HHhC
Confidence            666677899999999765543222346666665555554443  33322211000              000    0000


Q ss_pred             hcccccc--CcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          241 TITFLSA--LKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       241 ~~~~~~~--~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ...+..+  ..++   .++...||+.||.+|||++++++|||+.
T Consensus       238 ~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~  281 (486)
T 3mwu_A          238 KYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ  281 (486)
T ss_dssp             CCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHH
T ss_pred             CCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhc
Confidence            0000000  1111   1234478999999999999999999994

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=1e-40  Score=302.23  Aligned_cols=234  Identities=12%  Similarity=0.039  Sum_probs=173.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||+|+++.+++.||+|++++..  .....+.+.+|.++++.+ +||||++++++|+       +....+++|||
T Consensus        30 ~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~-------~~~~~~lv~E~  102 (353)
T 2i0e_A           30 KGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ-------TMDRLYFVMEY  102 (353)
T ss_dssp             EETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEE-------CSSEEEEEEEC
T ss_pred             eCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEE-------cCCEEEEEEeC
Confidence            5899999999999999999999997522  123356688999999988 7999999999775       34478899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec-cc
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA-VE  160 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~-~~  160 (340)
                      ++||+|.+++...+.     +++..++.++.||+.||+|||+  ++|+||||||+|||++.+|++||+|||+|+... ..
T Consensus       103 ~~gg~L~~~l~~~~~-----~~~~~~~~~~~qi~~aL~~LH~--~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~  175 (353)
T 2i0e_A          103 VNGGDLMYHIQQVGR-----FKEPHAVFYAAEIAIGLFFLQS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG  175 (353)
T ss_dssp             CCSCBHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHH--TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred             CCCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC
Confidence            999999999988765     9999999999999999999999  889999999999999999999999999998643 33


Q ss_pred             CCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      ....+.+||+.|+|||...+.++- ..|+|+.|...+.+.++.  .||.......              ...      .+
T Consensus       176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~--~Pf~~~~~~~--------------~~~------~i  233 (353)
T 2i0e_A          176 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ--APFEGEDEDE--------------LFQ------SI  233 (353)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSS--CSSCCSSHHH--------------HHH------HH
T ss_pred             cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCC--CCCCCCCHHH--------------HHH------HH
Confidence            445677899999999644332221 235555555554444333  3332211100              000      00


Q ss_pred             hhccccccCcCCcc-------ccccccccCCCCch-----HHHHhhcCcce
Q 019481          240 STITFLSALKITGC-------KSEEGYKNNSSLNP-----ICQIVNQHPFY  278 (340)
Q Consensus       240 ~~~~~~~~~~~p~~-------~~~~~l~~dP~~R~-----t~~~ll~hp~~  278 (340)
                      ..    ..+..|..       +...||++||.+||     +++++++|||+
T Consensus       234 ~~----~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f  280 (353)
T 2i0e_A          234 ME----HNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFF  280 (353)
T ss_dssp             HH----CCCCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGG
T ss_pred             Hh----CCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccc
Confidence            00    11222222       23467999999999     57999999999

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.7e-40  Score=294.25  Aligned_cols=241  Identities=15%  Similarity=0.112  Sum_probs=173.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCch-------------------------hhHHHHHHHHHHhhhcCCCcccccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPL-------------------------QLRRDDDGKLDSLEEIFHPNQVKPS   59 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~-------------------------~~~~~~~~E~~~l~~l~hpnIv~l~   59 (340)
                      .|+||.||+|++..+++.||+|++......                         ...+.+.+|++++++++||||++++
T Consensus        23 ~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~  102 (298)
T 2zv2_A           23 KGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLV  102 (298)
T ss_dssp             C--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTTBCCEE
T ss_pred             ecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCCCCeEE
Confidence            689999999999999999999999753211                         1235688999999999999999999


Q ss_pred             ccccccccccCCcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEE
Q 019481           60 GYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNIL  139 (340)
Q Consensus        60 ~~f~~~~~~~~~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NIL  139 (340)
                      +++..     .+....+++|||+++|+|.+++...      .+++..+..++.||++||+|||+  ++|+||||||+|||
T Consensus       103 ~~~~~-----~~~~~~~lv~e~~~~~~l~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~--~~ivH~Dlkp~Nil  169 (298)
T 2zv2_A          103 EVLDD-----PNEDHLYMVFELVNQGPVMEVPTLK------PLSEDQARFYFQDLIKGIEYLHY--QKIIHRDIKPSNLL  169 (298)
T ss_dssp             EEEEC-----SSSSEEEEEEECCTTCBSCCSSCSS------CCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEE
T ss_pred             EEEEc-----CCCCEEEEEEecCCCCcHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHEE
Confidence            97753     2345788999999999998876532      39999999999999999999999  88999999999999


Q ss_pred             ecCCCceEEeccccceeecccCC-cceeeccceeeccCccccch----hhhhHhHhCCccccccccccccCCCCCCcccc
Q 019481          140 LDETFKCNLSDFSTAKVSAVENA-DLTALDTSSVSAQSGKTGME----MKMAQLESGGWRAHDEAEKAFQWPYKSSHLKN  214 (340)
Q Consensus       140 l~~~~~~kl~DFGla~~~~~~~~-~~~~~gt~~~~~p~~~~~~~----~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~  214 (340)
                      ++.++++||+|||+++....... .....||+.|+|||.+.+..    -...|+|+.|...+.+.++.  .||.....  
T Consensus       170 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~--~pf~~~~~--  245 (298)
T 2zv2_A          170 VGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ--CPFMDERI--  245 (298)
T ss_dssp             ECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSS--CSSCCSSH--
T ss_pred             ECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCC--CCCCCccH--
Confidence            99999999999999987765432 23457899999997665432    12347777776666655544  33322111  


Q ss_pred             cCCCccCCchhHHHHHHHHHHHHhhhhccccccCcCCcc---ccccccccCCCCchHHHHhhcCcce
Q 019481          215 TRPNLKTENETWNNFLYLLLIATLLSTITFLSALKITGC---KSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       215 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                                  ......    .......+...+..+..   +...||+.||.+|||++++++|||+
T Consensus       246 ------------~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~  296 (298)
T 2zv2_A          246 ------------MCLHSK----IKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV  296 (298)
T ss_dssp             ------------HHHHHH----HHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHH
T ss_pred             ------------HHHHHH----HhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCccc
Confidence                        000000    00011111111222222   3447899999999999999999998

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=1.7e-39  Score=304.77  Aligned_cols=186  Identities=12%  Similarity=0.026  Sum_probs=136.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|++..+++.||+|++... ......+.+.+|+++|++++||||++++++|....  ..+...+|++|||+
T Consensus        62 G~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~~~~~~lv~e~~  139 (458)
T 3rp9_A           62 GTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKD--VEKFDELYVVLEIA  139 (458)
T ss_dssp             ------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC--TTTCCCEEEEECCC
T ss_pred             eecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCC--cccCceEEEEEecc
Confidence            3689999999999999999999998752 33455677899999999999999999999875432  13345688999998


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-  161 (340)
                       +|+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++++||+|||+|+...... 
T Consensus       140 -~~~L~~~~~~~~~-----l~~~~~~~~~~qi~~aL~~LH~--~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  211 (458)
T 3rp9_A          140 -DSDFKKLFRTPVY-----LTELHIKTLLYNLLVGVKYVHS--AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPEN  211 (458)
T ss_dssp             -SEEHHHHHHSSCC-----CCHHHHHHHHHHHHHHHHHHHH--TTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTT
T ss_pred             -ccchhhhcccCCC-----CCHHHHHHHHHHHHHHHHHHHh--CCcCCCCCChhhEEECCCCCEeecccccchhccCccc
Confidence             4799999988665     9999999999999999999999  779999999999999999999999999998764321 


Q ss_pred             ---------------------------CcceeeccceeeccCcccc-chhh-hhHhHhCCccccccc
Q 019481          162 ---------------------------ADLTALDTSSVSAQSGKTG-MEMK-MAQLESGGWRAHDEA  199 (340)
Q Consensus       162 ---------------------------~~~~~~gt~~~~~p~~~~~-~~~~-~~~~~s~g~~~~~~~  199 (340)
                                                 .....+||+.|+|||.+.. ..+- ..|+|+.|+..+++.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ell  278 (458)
T 3rp9_A          212 GNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL  278 (458)
T ss_dssp             CCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHH
T ss_pred             cccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHH
Confidence                                       1234578998999963311 1111 235555555554443

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=4.3e-41  Score=318.43  Aligned_cols=241  Identities=15%  Similarity=0.115  Sum_probs=173.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|++.+.. .......+.+|+++++.++||||++++++|.       +....+++||||+
T Consensus        47 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-------~~~~~~lv~e~~~  119 (494)
T 3lij_A           47 SGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFE-------DKRNYYLVMECYK  119 (494)
T ss_dssp             CC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEE-------CSSEEEEEEECCC
T ss_pred             cCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEE-------eCCEEEEEEecCC
Confidence            6999999999999999999999998532 2334567899999999999999999999775       4447789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCC---CceEEeccccceeeccc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDET---FKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~---~~~kl~DFGla~~~~~~  160 (340)
                      +|+|.+.+.....     +++..++.++.||++||+|||+  ++|+||||||+|||++.+   +.+||+|||+|+.....
T Consensus       120 ~g~L~~~~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~--~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~  192 (494)
T 3lij_A          120 GGELFDEIIHRMK-----FNEVDAAVIIKQVLSGVTYLHK--HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ  192 (494)
T ss_dssp             SCBHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred             CCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence            9999999987766     9999999999999999999999  789999999999999764   45999999999988776


Q ss_pred             CCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      ......+||+.|+||+.+.+.--...|+|+.|...+.+.++.  .||.......              ...    .....
T Consensus       193 ~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~--~pf~~~~~~~--------------~~~----~i~~~  252 (494)
T 3lij_A          193 KKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGY--PPFGGQTDQE--------------ILR----KVEKG  252 (494)
T ss_dssp             BCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSS--CSSCCSSHHH--------------HHH----HHHHT
T ss_pred             ccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCC--CCCCCCCHHH--------------HHH----HHHhC
Confidence            666677899999999644322112335555555554444333  2322211100              000    00000


Q ss_pred             hcccccc--CcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          241 TITFLSA--LKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       241 ~~~~~~~--~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ...+...  ..++   .++...||+.||.+|||++++++|||+.
T Consensus       253 ~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~  296 (494)
T 3lij_A          253 KYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIK  296 (494)
T ss_dssp             CCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHH
T ss_pred             CCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccc
Confidence            1111000  1111   1234478999999999999999999993

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=5.9e-40  Score=298.47  Aligned_cols=244  Identities=15%  Similarity=0.120  Sum_probs=168.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|++..+++.||+|++...  ....+.+.+|+.++++++||||++++++|.       +....+++|||++
T Consensus        29 G~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-------~~~~~~lv~e~~~   99 (361)
T 3uc3_A           29 GSGNFGVARLMRDKLTKELVAVKYIERG--AAIDENVQREIINHRSLRHPNIVRFKEVIL-------TPTHLAIIMEYAS   99 (361)
T ss_dssp             SSSTTSSEEEEEETTTCCEEEEEEEESS--TTSCHHHHHHHHHHHHCCCTTBCCEEEEEE-------CSSEEEEEEECCC
T ss_pred             ccCCCEEEEEEEECCCCcEEEEEEEecC--ccccHHHHHHHHHHHhCCCCCCCcEEEEEe-------eCCEEEEEEEeCC
Confidence            3689999999999999999999999742  233456889999999999999999999775       3446789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCc--eEEeccccceeecccC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFK--CNLSDFSTAKVSAVEN  161 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~--~kl~DFGla~~~~~~~  161 (340)
                      +|+|.+++...+.     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++.  +||+|||+|+......
T Consensus       100 ~~~L~~~l~~~~~-----~~~~~~~~i~~ql~~~L~~LH~--~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~  172 (361)
T 3uc3_A          100 GGELYERICNAGR-----FSEDEARFFFQQLLSGVSYCHS--MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS  172 (361)
T ss_dssp             SCBHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHH--TTCCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred             CCCHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC
Confidence            9999999987665     9999999999999999999999  88999999999999987765  9999999998665555


Q ss_pred             CcceeeccceeeccCccccchhh--hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMK--MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~--~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      .....+||+.|+||+.+.+.++.  ..|+|+.|...+.+.++.  .||......          ..+......    ...
T Consensus       173 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~--~Pf~~~~~~----------~~~~~~~~~----~~~  236 (361)
T 3uc3_A          173 QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGA--YPFEDPEEP----------RDYRKTIQR----ILS  236 (361)
T ss_dssp             --------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSS--CSCC----C----------CCHHHHHHH----HHT
T ss_pred             CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCC--CCCCCCccH----------HHHHHHHHH----Hhc
Confidence            55667899999999755443332  247777666666655544  333221110          001111100    010


Q ss_pred             hhccccccCcCCc---cccccccccCCCCchHHHHhhcCccee
Q 019481          240 STITFLSALKITG---CKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       240 ~~~~~~~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ..........++.   .+...||+.||.+|||++++++|||+.
T Consensus       237 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~  279 (361)
T 3uc3_A          237 VKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFL  279 (361)
T ss_dssp             TCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHH
T ss_pred             CCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchh
Confidence            0111111111121   234478999999999999999999993

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=3.8e-39  Score=295.32  Aligned_cols=239  Identities=11%  Similarity=0.089  Sum_probs=177.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|+++... ......+.+|+++|++++||||++++++|.       +....+++|||+++
T Consensus        61 ~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-------~~~~~~lv~E~~~g  132 (387)
T 1kob_A           61 SGAFGVVHRCVEKATGRVFVAKFINTPY-PLDKYTVKNEISIMNQLHHPKLINLHDAFE-------DKYEMVLILEFLSG  132 (387)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCSTTBCCEEEEEE-------CSSEEEEEEECCCC
T ss_pred             cCCCEEEEEEEECCCCCEEEEEEecccc-hhhHHHHHHHHHHHHhCCCcCCCeEEEEEE-------eCCEEEEEEEcCCC
Confidence            5899999999999999999999997543 334567899999999999999999999775       34478899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC--CCceEEeccccceeecccCC
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE--TFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~--~~~~kl~DFGla~~~~~~~~  162 (340)
                      |+|.+++.....    .+++..++.++.||+.||+|||+  ++|+||||||+|||++.  ++.+||+|||+|+.......
T Consensus       133 g~L~~~l~~~~~----~l~~~~~~~i~~qi~~aL~~LH~--~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~  206 (387)
T 1kob_A          133 GELFDRIAAEDY----KMSEAEVINYMRQACEGLKHMHE--HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI  206 (387)
T ss_dssp             CBHHHHTTCTTC----CBCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred             CcHHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHh--CCeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence            999999987653    39999999999999999999999  78999999999999974  57899999999998876665


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      ....+||+.|+|||...+..+- ..|+|+.|...+.+.++.  .||.....                   ..... ....
T Consensus       207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~--~Pf~~~~~-------------------~~~~~-~i~~  264 (387)
T 1kob_A          207 VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGL--SPFAGEDD-------------------LETLQ-NVKR  264 (387)
T ss_dssp             EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSC--CSSCCSSH-------------------HHHHH-HHHH
T ss_pred             eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCC--CCCCCCCH-------------------HHHHH-HHHh
Confidence            6667899999999644322211 235555555555444433  23222111                   00000 0011


Q ss_pred             ccccccC----cCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          242 ITFLSAL----KIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       242 ~~~~~~~----~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ..+...+    .++   .++...||+.||.+|||++++++|||+.
T Consensus       265 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~  309 (387)
T 1kob_A          265 CDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK  309 (387)
T ss_dssp             CCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTS
T ss_pred             CCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCcccc
Confidence            1111111    112   1234478999999999999999999994

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=3.8e-40  Score=312.70  Aligned_cols=243  Identities=13%  Similarity=0.124  Sum_probs=177.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCch------------hhHHHHHHHHHHhhhcCCCccccccccccccccccCCc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPL------------QLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDR   72 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~------------~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~   72 (340)
                      .|+||.||+|++..+++.||+|++......            ...+.+.+|++++++++||||++++++|.       +.
T Consensus        46 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-------~~  118 (504)
T 3q5i_A           46 SGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFE-------DK  118 (504)
T ss_dssp             C--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEE-------CS
T ss_pred             ccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-------cC
Confidence            689999999999999999999999753211            23567899999999999999999999775       44


Q ss_pred             ceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC---ceEEe
Q 019481           73 RYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF---KCNLS  149 (340)
Q Consensus        73 ~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~---~~kl~  149 (340)
                      ...+++||||++|+|.+.+.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++   .+||+
T Consensus       119 ~~~~lv~e~~~gg~L~~~l~~~~~-----~~~~~~~~i~~qi~~~l~~lH~--~~ivH~Dlkp~Nil~~~~~~~~~~kl~  191 (504)
T 3q5i_A          119 KYFYLVTEFYEGGELFEQIINRHK-----FDECDAANIMKQILSGICYLHK--HNIVHRDIKPENILLENKNSLLNIKIV  191 (504)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSC-----CCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEESSTTCCSSEEEC
T ss_pred             CEEEEEEecCCCCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeEeCCCcHHHEEEecCCCCccEEEE
Confidence            578899999999999999987765     9999999999999999999999  8899999999999998876   69999


Q ss_pred             ccccceeecccCCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHH
Q 019481          150 DFSTAKVSAVENADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNF  229 (340)
Q Consensus       150 DFGla~~~~~~~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (340)
                      |||+|+...........+||+.|+||+.+.+.--...|+|+.|...+.+.++.  .||.......+...+..+...++  
T Consensus       192 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~--~pf~~~~~~~~~~~i~~~~~~~~--  267 (504)
T 3q5i_A          192 DFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGY--PPFGGQNDQDIIKKVEKGKYYFD--  267 (504)
T ss_dssp             CCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSS--CSSCCSSHHHHHHHHHHCCCCCC--
T ss_pred             ECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCC--CCCCCCCHHHHHHHHHcCCCCCC--
Confidence            99999988776666677899999999644332222345666555555544433  33322221111111111100000  


Q ss_pred             HHHHHHHHhhhhccccccCcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          230 LYLLLIATLLSTITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                                    ......++   .++...||+.||.+|||++++++|||+.
T Consensus       268 --------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~  306 (504)
T 3q5i_A          268 --------------FNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIK  306 (504)
T ss_dssp             --------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             --------------ccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhh
Confidence                          00001111   2234578999999999999999999994

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=7.4e-41  Score=305.59  Aligned_cols=243  Identities=12%  Similarity=0.065  Sum_probs=172.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|++..+++.||+|+++... ....+.+.+|++++++++||||++++++|.       +....+++|||++
T Consensus        98 G~G~~g~Vy~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-------~~~~~~lv~E~~~  169 (373)
T 2x4f_A           98 GGGRFGQVHKCEETATGLKLAAKIIKTRG-MKDKEEVKNEISVMNQLDHANLIQLYDAFE-------SKNDIVLVMEYVD  169 (373)
T ss_dssp             C-----CEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-------CSSEEEEEEECCT
T ss_pred             ecCcCEEEEEEEEcCCCcEEEEEEEcccc-cccHHHHHHHHHHHHhCCCCCCCeEEEEEE-------ECCEEEEEEeCCC
Confidence            36899999999999999999999998533 345677899999999999999999999775       3346789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEe--cCCCceEEeccccceeecccC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILL--DETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl--~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +|+|.+++.....    .+++..++.++.||+.||+|||+  ++|+||||||+|||+  +.++++||+|||+++......
T Consensus       170 ~~~L~~~l~~~~~----~l~~~~~~~i~~qi~~aL~~LH~--~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~  243 (373)
T 2x4f_A          170 GGELFDRIIDESY----NLTELDTILFMKQICEGIRHMHQ--MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE  243 (373)
T ss_dssp             TCEEHHHHHHTGG----GCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC
T ss_pred             CCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHH--CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc
Confidence            9999999876543    49999999999999999999999  889999999999999  567899999999999887766


Q ss_pred             CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      .....+||+.|+|||.+.+..+. ..|+|+.|...+.+.++.  .||......             ......   .....
T Consensus       244 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~--~pf~~~~~~-------------~~~~~i---~~~~~  305 (373)
T 2x4f_A          244 KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGL--SPFLGDNDA-------------ETLNNI---LACRW  305 (373)
T ss_dssp             BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSS--CTTCCSSHH-------------HHHHHH---HHTCC
T ss_pred             ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCC--CCCCCCCHH-------------HHHHHH---HhccC
Confidence            66667899999998643322111 235555555554444333  222211110             000000   00000


Q ss_pred             hccccccCcCCc---cccccccccCCCCchHHHHhhcCcce
Q 019481          241 TITFLSALKITG---CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .......+.++.   ++...||+.||.+|||++++++|||+
T Consensus       306 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~  346 (373)
T 2x4f_A          306 DLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWL  346 (373)
T ss_dssp             CSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHH
T ss_pred             CCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCc
Confidence            000000112221   23457899999999999999999999

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=6.2e-40  Score=302.50  Aligned_cols=161  Identities=15%  Similarity=0.051  Sum_probs=137.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|+++.+++.||+|++++..  .....+.+.+|.+++.+++||||++++++|+       +..+.|++|||+
T Consensus        71 ~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~-------~~~~~~lVmE~~  143 (412)
T 2vd5_A           71 RGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ-------DENYLYLVMEYY  143 (412)
T ss_dssp             ECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE-------CSSEEEEEECCC
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe-------eCCEEEEEEcCC
Confidence            5899999999999999999999997521  1223455889999999999999999999776       444788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      +||+|.+++.+.+.    .+++..++.++.||+.||+|||+  ++|+||||||+|||++.+|++||+|||+|+.......
T Consensus       144 ~gg~L~~~l~~~~~----~l~~~~~~~~~~qi~~aL~~LH~--~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~  217 (412)
T 2vd5_A          144 VGGDLLTLLSKFGE----RIPAEMARFYLAEIVMAIDSVHR--LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT  217 (412)
T ss_dssp             CSCBHHHHHHHHSS----CCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred             CCCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHH--CCeeecccCHHHeeecCCCCEEEeechhheeccCCCc
Confidence            99999999987542    39999999999999999999999  8899999999999999999999999999988765433


Q ss_pred             --cceeeccceeeccCcc
Q 019481          163 --DLTALDTSSVSAQSGK  178 (340)
Q Consensus       163 --~~~~~gt~~~~~p~~~  178 (340)
                        ..+.+||+.|+|||.+
T Consensus       218 ~~~~~~~Gt~~Y~APE~l  235 (412)
T 2vd5_A          218 VRSLVAVGTPDYLSPEIL  235 (412)
T ss_dssp             EECSSCCSCGGGCCHHHH
T ss_pred             cccceeccccCcCCHHHH
Confidence              2346899999988543

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=3.5e-39  Score=299.02  Aligned_cols=241  Identities=13%  Similarity=0.104  Sum_probs=169.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc-------hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP-------LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWK   77 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-------~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~   77 (340)
                      .|+||.||+|++..+++.||+|++.+...       ......+.+|+++|++++||||++++++|...        ..++
T Consensus       145 ~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--------~~~l  216 (419)
T 3i6u_A          145 SGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE--------DYYI  216 (419)
T ss_dssp             ECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS--------EEEE
T ss_pred             eCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC--------ceEE
Confidence            58999999999999999999999975321       12223578999999999999999999976422        4679


Q ss_pred             eeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC---ceEEeccccc
Q 019481           78 NKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF---KCNLSDFSTA  154 (340)
Q Consensus        78 ~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~---~~kl~DFGla  154 (340)
                      +|||+++|+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++   .+||+|||+|
T Consensus       217 v~e~~~~g~L~~~l~~~~~-----~~~~~~~~i~~qi~~~l~~LH~--~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a  289 (419)
T 3i6u_A          217 VLELMEGGELFDKVVGNKR-----LKEATCKLYFYQMLLAVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHS  289 (419)
T ss_dssp             EEECCTTCBGGGGTSSSCC-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred             EEEcCCCCcHHHHHhccCC-----CCHHHHHHHHHHHHHHHHHHHH--CCccccCCChHhEEEecCCCcceEEEeecccc
Confidence            9999999999999987765     9999999999999999999999  7899999999999997644   5999999999


Q ss_pred             eeecccCCcceeeccceeeccCcccc---chh-hhhHhHhCCccccccccccccCCCCCCccc-ccCCCccCCchhHHHH
Q 019481          155 KVSAVENADLTALDTSSVSAQSGKTG---MEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLK-NTRPNLKTENETWNNF  229 (340)
Q Consensus       155 ~~~~~~~~~~~~~gt~~~~~p~~~~~---~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~  229 (340)
                      +.........+.+||+.|+|||.+.+   ..+ ...|+|+.|...+.+.++.  .||...... .+...+..+...+...
T Consensus       290 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~--~pf~~~~~~~~~~~~i~~~~~~~~~~  367 (419)
T 3i6u_A          290 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY--PPFSEHRTQVSLKDQITSGKYNFIPE  367 (419)
T ss_dssp             TSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSS--CSSCCCSSSCCHHHHHHTTCCCCCHH
T ss_pred             eecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCC--CCCCCCcchHHHHHHHhcCCCCCCch
Confidence            98776665667889999999987643   111 2457888777777766655  343322111 0000111111100000


Q ss_pred             HHHHHHHHhhhhccccccCcCC---ccccccccccCCCCchHHHHhhcCcce
Q 019481          230 LYLLLIATLLSTITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .                .+..+   .++...||+.||.+|||++++++|||+
T Consensus       368 ~----------------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~  403 (419)
T 3i6u_A          368 V----------------WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL  403 (419)
T ss_dssp             H----------------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGG
T ss_pred             h----------------hcccCHHHHHHHHHHccCChhHCcCHHHHhCCccc
Confidence            0                00011   123447899999999999999999999

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=2.4e-39  Score=307.96  Aligned_cols=241  Identities=15%  Similarity=0.067  Sum_probs=179.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|++.+..  .......+.+|+++|++++||||++++++|+       +....+++|||+
T Consensus       194 ~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~-------~~~~l~lVmEy~  266 (576)
T 2acx_A          194 KGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE-------TKDALCLVLTLM  266 (576)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEE-------CSSEEEEEECCC
T ss_pred             eCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEe-------eCCEEEEEEEcC
Confidence            5899999999999999999999997521  1233466889999999999999999999775       344788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      +||+|.+++.....   ..+++..++.++.||+.||+|||+  ++|+||||||+|||++.+|++||+|||+|+.......
T Consensus       267 ~gg~L~~~l~~~~~---~~l~e~~~~~i~~qIl~aL~yLH~--~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~  341 (576)
T 2acx_A          267 NGGDLKFHIYHMGQ---AGFPEARAVFYAAEICCGLEDLHR--ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT  341 (576)
T ss_dssp             CSCBHHHHHHSSSS---CCCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred             CCCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHH--CCEeccCCchheEEEeCCCCeEEEecccceecccCcc
Confidence            99999999987653   359999999999999999999999  8899999999999999999999999999998877666


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      ..+.+||+.|+||+.+.+.++. ..|+|+.|...+.+.++.  .||........          .......      +. 
T Consensus       342 ~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~--~PF~~~~~~~~----------~~~i~~~------i~-  402 (576)
T 2acx_A          342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ--SPFQQRKKKIK----------REEVERL------VK-  402 (576)
T ss_dssp             EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSS--CSSSCSSSCCC----------HHHHHHH------HH-
T ss_pred             ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCC--CCCcccccchh----------HHHHHHH------hh-
Confidence            6677899999999644332221 235666555555554443  33322211000          0000000      00 


Q ss_pred             ccccccCcCCcc-------ccccccccCCCCch-----HHHHhhcCccee
Q 019481          242 ITFLSALKITGC-------KSEEGYKNNSSLNP-----ICQIVNQHPFYI  279 (340)
Q Consensus       242 ~~~~~~~~~p~~-------~~~~~l~~dP~~R~-----t~~~ll~hp~~~  279 (340)
                         ...+..|..       +...||++||.+||     +++++++|||+.
T Consensus       403 ---~~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~  449 (576)
T 2acx_A          403 ---EVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFK  449 (576)
T ss_dssp             ---HCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGT
T ss_pred             ---cccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhc
Confidence               011122222       33467999999999     899999999993

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=8.9e-39  Score=297.53  Aligned_cols=163  Identities=14%  Similarity=0.072  Sum_probs=135.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|+++.. ......+.+.+|+++|++++||||+++++++....  ..+....|++|||+.
T Consensus        36 ~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~~~~~~~lv~e~~~  113 (432)
T 3n9x_A           36 RGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDD--LLKFDELYIVLEIAD  113 (432)
T ss_dssp             EETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC--TTTCCCEEEEEECCS
T ss_pred             ecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCC--CCcCCeEEEEEecCC
Confidence            589999999999999999999999752 33455678899999999999999999999876432  112246789999996


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC-
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA-  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~-  162 (340)
                       |+|.++++....     +++..++.++.||+.||+|||+  .+|+||||||+|||++.++.+||+|||+|+....... 
T Consensus       114 -~~L~~~~~~~~~-----l~~~~~~~i~~qil~aL~~LH~--~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~  185 (432)
T 3n9x_A          114 -SDLKKLFKTPIF-----LTEEHIKTILYNLLLGENFIHE--SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDT  185 (432)
T ss_dssp             -EEHHHHHHSSCC-----CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEECTTCCEEECCCTTCEEC------
T ss_pred             -cCHHHHHhccCC-----CCHHHHHHHHHHHHHHHHHHHH--CCCCCCCCCHHHeEECCCCCEEEccCCCcccccccccc
Confidence             599999988665     9999999999999999999999  7799999999999999999999999999987754321 


Q ss_pred             ----------------------cceeeccceeeccCc
Q 019481          163 ----------------------DLTALDTSSVSAQSG  177 (340)
Q Consensus       163 ----------------------~~~~~gt~~~~~p~~  177 (340)
                                            ....+||+.|+|||.
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~  222 (432)
T 3n9x_A          186 NIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPEL  222 (432)
T ss_dssp             -------------------------CCCCCTTCCHHH
T ss_pred             cccccccccccccccccchhccccCCCCCccccCHHH
Confidence                                  245688999999963

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=6e-40  Score=293.82  Aligned_cols=239  Identities=15%  Similarity=0.110  Sum_probs=177.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCch-----hhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPL-----QLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~-----~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      .|+||.||+|++..+++.||+|+++.....     ...+.+.+|++++++++||||++++++|.       +....++++
T Consensus        22 ~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------~~~~~~lv~   94 (321)
T 2a2a_A           22 SGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYE-------NRTDVVLIL   94 (321)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE-------CSSEEEEEE
T ss_pred             ecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEe-------cCCEEEEEE
Confidence            589999999999999999999999863321     13567899999999999999999999765       344788999


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC----ceEEeccccce
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF----KCNLSDFSTAK  155 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~----~~kl~DFGla~  155 (340)
                      ||+++|+|.+++.....     +++..+..++.||+.||+|||+  ++|+||||||+||+++.++    ++||+|||+++
T Consensus        95 e~~~~~~L~~~l~~~~~-----~~~~~~~~i~~qi~~aL~~lH~--~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~  167 (321)
T 2a2a_A           95 ELVSGGELFDFLAQKES-----LSEEEATSFIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH  167 (321)
T ss_dssp             CCCCSCBHHHHHHTCSC-----EEHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred             EcCCCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence            99999999999987655     9999999999999999999999  8899999999999999888    79999999999


Q ss_pred             eecccCCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHH
Q 019481          156 VSAVENADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLL  234 (340)
Q Consensus       156 ~~~~~~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (340)
                      ............||+.|++|+...+..+. ..|+|+.|...+.+.++.  .||...........+               
T Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~--~pf~~~~~~~~~~~i---------------  230 (321)
T 2a2a_A          168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA--SPFLGDTKQETLANI---------------  230 (321)
T ss_dssp             ECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSC--CSSCCSSHHHHHHHH---------------
T ss_pred             ecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCC--CCCCCCCHHHHHHHH---------------
Confidence            88766555667789999999644322211 235666555555544433  222211110000000               


Q ss_pred             HHHhhhhcccccc----CcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          235 IATLLSTITFLSA----LKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       235 ~~~~~~~~~~~~~----~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                           ........    +..+   .++...||+.||.+|||++++++|||+.
T Consensus       231 -----~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~  277 (321)
T 2a2a_A          231 -----TSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT  277 (321)
T ss_dssp             -----HTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTS
T ss_pred             -----HhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCcccc
Confidence                 00001000    1111   2334578999999999999999999993

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=1.1e-39  Score=300.51  Aligned_cols=242  Identities=18%  Similarity=0.084  Sum_probs=173.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|+++.+++.||+|++++..  .....+.+.+|+++++.++||||++++++|.       +....+++|||+
T Consensus        79 ~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-------~~~~~~lV~E~~  151 (410)
T 3v8s_A           79 RGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ-------DDRYLYMVMEYM  151 (410)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEE-------CSSEEEEEECCC
T ss_pred             cCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-------ECCEEEEEEeCC
Confidence            5899999999999999999999997421  1122345789999999999999999999775       445788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-  161 (340)
                      +||+|.++++.. .     +++..++.++.||+.||+|||+  ++|+||||||+|||++.+|++||+|||+|+...... 
T Consensus       152 ~gg~L~~~l~~~-~-----~~e~~~~~~~~qi~~aL~~LH~--~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~  223 (410)
T 3v8s_A          152 PGGDLVNLMSNY-D-----VPEKWARFYTAEVVLALDAIHS--MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM  223 (410)
T ss_dssp             TTEEHHHHHHHC-C-----CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSE
T ss_pred             CCCcHHHHHHcC-C-----CCHHHHHHHHHHHHHHHHHHHH--CCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCc
Confidence            999999999753 3     8999999999999999999999  889999999999999999999999999998776543 


Q ss_pred             -CcceeeccceeeccCccccch----h-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHH
Q 019481          162 -ADLTALDTSSVSAQSGKTGME----M-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLI  235 (340)
Q Consensus       162 -~~~~~~gt~~~~~p~~~~~~~----~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (340)
                       ...+.+||+.|+||+.+.+.+    + ...|+|+.|...+.+.++.  .||.......+             +..+   
T Consensus       224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~--~Pf~~~~~~~~-------------~~~i---  285 (410)
T 3v8s_A          224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD--TPFYADSLVGT-------------YSKI---  285 (410)
T ss_dssp             EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSS--CTTCCSSHHHH-------------HHHH---
T ss_pred             ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCC--CCCCCCChhhH-------------HHHH---
Confidence             234678999999996443221    1 1235555554444444333  33222111000             0000   


Q ss_pred             HHhhhhccccccCcCCc---cccccccccCCCC--chHHHHhhcCccee
Q 019481          236 ATLLSTITFLSALKITG---CKSEEGYKNNSSL--NPICQIVNQHPFYI  279 (340)
Q Consensus       236 ~~~~~~~~~~~~~~~p~---~~~~~~l~~dP~~--R~t~~~ll~hp~~~  279 (340)
                      ........+...+.++.   ++...||+.+|.+  |++++++++|||+.
T Consensus       286 ~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~  334 (410)
T 3v8s_A          286 MNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFK  334 (410)
T ss_dssp             HTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGC
T ss_pred             HhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCcccc
Confidence            00001111111112222   2344678888888  99999999999993

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=4.6e-39  Score=284.19  Aligned_cols=181  Identities=16%  Similarity=0.130  Sum_probs=143.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|+++... .....+.+.+|++++++++||||++++++|.+       ....+++|||++
T Consensus        12 ~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~~~lv~e~~~   84 (292)
T 3o0g_A           12 EGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-------DKKLTLVFEFCD   84 (292)
T ss_dssp             ECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-------TTEEEEEEECCS
T ss_pred             CCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEe-------CCEEEEEEecCC
Confidence            5899999999999999999999998633 33445778899999999999999999997753       346789999997


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-CC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-NA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~~  162 (340)
                      + +|.+.+.....    .+++..++.++.||+.||+|||+  ++|+||||||+|||++.++++||+|||+|+..... ..
T Consensus        85 ~-~l~~~~~~~~~----~l~~~~~~~~~~ql~~~l~~lH~--~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  157 (292)
T 3o0g_A           85 Q-DLKKYFDSCNG----DLDPEIVKSFLFQLLKGLGFCHS--RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC  157 (292)
T ss_dssp             E-EHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC
T ss_pred             C-CHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCCEEEeecccceecCCcccc
Confidence            5 66666655333    39999999999999999999999  88999999999999999999999999999877543 23


Q ss_pred             cceeeccceeeccCccccch--hhhhHhHhCCccccccc
Q 019481          163 DLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEA  199 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~  199 (340)
                      .....||+.|+|||...+..  -...|+|+.|...+.+.
T Consensus       158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~  196 (292)
T 3o0g_A          158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELA  196 (292)
T ss_dssp             CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHT
T ss_pred             ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHH
Confidence            34557899899996443322  11235555555554443

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=3.4e-39  Score=289.45  Aligned_cols=242  Identities=15%  Similarity=0.106  Sum_probs=158.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|++..    .....+.+|+++++.++ ||||++++++|.       +....+++|||++
T Consensus        21 ~G~~g~V~~~~~~~~~~~vavK~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~-------~~~~~~lv~e~~~   89 (325)
T 3kn6_A           21 EGSFSICRKCVHKKSNQAFAVKIISK----RMEANTQKEITALKLCEGHPNIVKLHEVFH-------DQLHTFLVMELLN   89 (325)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEEG----GGHHHHHHHHHHHHHTTTCTTBCCEEEEEE-------CSSEEEEEECCCC
T ss_pred             cCCCeEEEEEEECCCCCEEEEEEECh----hhhhhHHHHHHHHHHhcCCCCeeEEEEEEE-------cCCEEEEEEEccC
Confidence            58999999999999999999999963    33456789999999997 999999999775       4447789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC---ceEEeccccceeeccc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF---KCNLSDFSTAKVSAVE  160 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~---~~kl~DFGla~~~~~~  160 (340)
                      +|+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++   .+||+|||+++.....
T Consensus        90 ~~~L~~~l~~~~~-----~~~~~~~~i~~qi~~~l~~LH~--~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~  162 (325)
T 3kn6_A           90 GGELFERIKKKKH-----FSETEASYIMRKLVSAVSHMHD--VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD  162 (325)
T ss_dssp             SCBHHHHHHHCSC-----CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred             CCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence            9999999988765     9999999999999999999999  8899999999999998765   8999999999876543


Q ss_pred             -CCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHh
Q 019481          161 -NADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATL  238 (340)
Q Consensus       161 -~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (340)
                       ....+.+||+.|+|||.+.+.++. ..|+|+.|...+.+.++.  .||..........      .    ....   ...
T Consensus       163 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~--~pf~~~~~~~~~~------~----~~~~---~~~  227 (325)
T 3kn6_A          163 NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ--VPFQSHDRSLTCT------S----AVEI---MKK  227 (325)
T ss_dssp             ---------------------CCCCHHHHHHHHHHHHHHHHHSS--CTTC-------CC------C----HHHH---HHH
T ss_pred             CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCC--CCCCCCccccccc------c----HHHH---HHH
Confidence             333466789999999755433322 235666555555554433  3322211100000      0    0000   000


Q ss_pred             hhhcccccc----CcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          239 LSTITFLSA----LKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       239 ~~~~~~~~~----~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      +....+...    +.++   .++...||+.||.+|||++++++|||+.
T Consensus       228 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~  275 (325)
T 3kn6_A          228 IKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQ  275 (325)
T ss_dssp             HTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGC
T ss_pred             HHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhc
Confidence            000000000    0111   1234478999999999999999999994

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=9.5e-40  Score=303.29  Aligned_cols=161  Identities=14%  Similarity=0.023  Sum_probs=136.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc--hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP--LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||+||+|+++.+++.||+|++++...  ....+.+.+|..+++.++||||++++++|.       +....+++|||+
T Consensus        84 ~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~-------~~~~~~lV~Ey~  156 (437)
T 4aw2_A           84 RGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ-------DDNNLYLVMDYY  156 (437)
T ss_dssp             ECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE-------CSSEEEEEECCC
T ss_pred             eCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-------eCCEEEEEEecC
Confidence            58999999999999999999999975211  122334889999999999999999999775       444788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      +||+|.+++.....    .+++..++.++.||+.||+|||+  ++|+||||||+|||++.++++||+|||+|+.......
T Consensus       157 ~gg~L~~~l~~~~~----~l~e~~~~~~~~qi~~aL~~LH~--~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~  230 (437)
T 4aw2_A          157 VGGDLLTLLSKFED----RLPEEMARFYLAEMVIAIDSVHQ--LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT  230 (437)
T ss_dssp             TTCBHHHHHHTTTT----CCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred             CCCcHHHHHHHccC----CCCHHHHHHHHHHHHHHHHHHHh--CCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC
Confidence            99999999987433    39999999999999999999999  8899999999999999999999999999987755433


Q ss_pred             --cceeeccceeeccCcc
Q 019481          163 --DLTALDTSSVSAQSGK  178 (340)
Q Consensus       163 --~~~~~gt~~~~~p~~~  178 (340)
                        ....+||+.|+|||.+
T Consensus       231 ~~~~~~~GT~~Y~APE~l  248 (437)
T 4aw2_A          231 VQSSVAVGTPDYISPEIL  248 (437)
T ss_dssp             EECCSCCSCGGGCCHHHH
T ss_pred             cccccccCCcCeeChHHH
Confidence              2346899999888543

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.7e-39  Score=291.26  Aligned_cols=238  Identities=14%  Similarity=0.052  Sum_probs=179.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc-------hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP-------LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCW   76 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-------~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~   76 (340)
                      ..|+||.||+|++..+++.||+|+++....       ....+.+.+|++++++++||||++++++|.       +....+
T Consensus        33 G~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~-------~~~~~~  105 (335)
T 3dls_A           33 GSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFE-------NQGFFQ  105 (335)
T ss_dssp             SSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEE-------CSSEEE
T ss_pred             EecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-------eCCEEE
Confidence            368999999999999999999999985321       113345788999999999999999999775       444778


Q ss_pred             eeeccccCC-CHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccce
Q 019481           77 KNKWLMQKK-GLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK  155 (340)
Q Consensus        77 ~~~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~  155 (340)
                      +++||+.+| +|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++
T Consensus       106 lv~e~~~~g~~l~~~~~~~~~-----l~~~~~~~i~~qi~~~L~~LH~--~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~  178 (335)
T 3dls_A          106 LVMEKHGSGLDLFAFIDRHPR-----LDEPLASYIFRQLVSAVGYLRL--KDIIHRDIKDENIVIAEDFTIKLIDFGSAA  178 (335)
T ss_dssp             EEEECCTTSCBHHHHHHTCCC-----CCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             EEEEeCCCCccHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCeEEeccCHHHEEEcCCCcEEEeecccce
Confidence            999998776 99999998766     9999999999999999999999  889999999999999999999999999999


Q ss_pred             eecccCCcceeeccceeeccCccccchh--hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHH
Q 019481          156 VSAVENADLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLL  233 (340)
Q Consensus       156 ~~~~~~~~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (340)
                      .........+.+||+.|+||+.+.+..+  ...|+|+.|...+.+.++.  .||..... .. .........++...   
T Consensus       179 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~--~pf~~~~~-~~-~~~~~~~~~~~~~l---  251 (335)
T 3dls_A          179 YLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEE--NPFCELEE-TV-EAAIHPPYLVSKEL---  251 (335)
T ss_dssp             ECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSS--CSCSSGGG-GT-TTCCCCSSCCCHHH---
T ss_pred             ECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCC--CchhhHHH-HH-hhccCCCcccCHHH---
Confidence            8877766677889999999975544333  1346777666666555444  33222110 00 00000000000000   


Q ss_pred             HHHHhhhhccccccCcCCccccccccccCCCCchHHHHhhcCcceee
Q 019481          234 LIATLLSTITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       234 ~~~~~~~~~~~~~~~~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                                        ..+...||+.||.+|||++++++|||+..
T Consensus       252 ------------------~~li~~~L~~dP~~Rps~~ell~hp~~~~  280 (335)
T 3dls_A          252 ------------------MSLVSGLLQPVPERRTTLEKLVTDPWVTQ  280 (335)
T ss_dssp             ------------------HHHHHHHTCSSGGGSCCHHHHHHCTTTTC
T ss_pred             ------------------HHHHHHHccCChhhCcCHHHHhcCccccC
Confidence                              12233678999999999999999999943

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=1.5e-39  Score=294.74  Aligned_cols=244  Identities=14%  Similarity=0.046  Sum_probs=172.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc----hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP----LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|+||.||+|+++.+++.||+|+++....    ....+.+.+|++++++++||||++++++|..       ....+++||
T Consensus        34 ~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-------~~~~~lv~e  106 (351)
T 3c0i_A           34 KGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS-------DGMLYMVFE  106 (351)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------TTEEEEEEE
T ss_pred             eCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEe-------CCEEEEEEe
Confidence            58999999999999999999999974211    1235678999999999999999999997753       347789999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCc---eEEeccccceee
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFK---CNLSDFSTAKVS  157 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~---~kl~DFGla~~~  157 (340)
                      |++||+|.+.+...... +..+++..+..++.||++||+|||+  ++|+||||||+|||++.++.   +||+|||+++..
T Consensus       107 ~~~g~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~--~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~  183 (351)
T 3c0i_A          107 FMDGADLCFEIVKRADA-GFVYSEAVASHYMRQILEALRYCHD--NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL  183 (351)
T ss_dssp             CCSSCBHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred             CCCCCCHHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHH--CCceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence            99999999888654210 1248999999999999999999999  88999999999999987655   999999999887


Q ss_pred             cccCC-cceeeccceeeccCccccchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHH
Q 019481          158 AVENA-DLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLI  235 (340)
Q Consensus       158 ~~~~~-~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (340)
                      ..... ....+||+.|+|||.+.+..+ ...|+|+.|...+.+.++.  .||....                   .....
T Consensus       184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~--~pf~~~~-------------------~~~~~  242 (351)
T 3c0i_A          184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGC--LPFYGTK-------------------ERLFE  242 (351)
T ss_dssp             CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS--CSSCSSH-------------------HHHHH
T ss_pred             cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCC--CCCCCcH-------------------HHHHH
Confidence            65433 345679999999964433221 1235555555555444433  2222111                   00000


Q ss_pred             HHhhhhccccc--cCcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          236 ATLLSTITFLS--ALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       236 ~~~~~~~~~~~--~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ...........  .+.++   .++...||+.||++|||++++++|||+.
T Consensus       243 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~  291 (351)
T 3c0i_A          243 GIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK  291 (351)
T ss_dssp             HHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             HHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhc
Confidence            00000000000  01112   2234478999999999999999999993

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=2.2e-39  Score=285.30  Aligned_cols=245  Identities=16%  Similarity=0.134  Sum_probs=170.4

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|++.........+.+.+|++++++++||||++++++|.       +....++++||+++
T Consensus        32 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-------~~~~~~lv~e~~~~  104 (285)
T 3is5_A           32 SGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFE-------DYHNMYIVMETCEG  104 (285)
T ss_dssp             ECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEE-------CSSEEEEEECCCSC
T ss_pred             cCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHhee-------cCCeEEEEEEeCCC
Confidence            58999999999999999999999986544445678899999999999999999999765       34467899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEe---cCCCceEEeccccceeecccC
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILL---DETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl---~~~~~~kl~DFGla~~~~~~~  161 (340)
                      |+|.+.+..... ....+++..++.++.||++||+|||+  ++|+||||||+|||+   +.++.+||+|||+++......
T Consensus       105 ~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~--~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~  181 (285)
T 3is5_A          105 GELLERIVSAQA-RGKALSEGYVAELMKQMMNALAYFHS--QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE  181 (285)
T ss_dssp             CBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred             CcHHHHHHhhhh-cccCCCHHHHHHHHHHHHHHHHHHHh--CCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence            999999865311 01239999999999999999999999  889999999999999   456889999999998877666


Q ss_pred             CcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      ......||+.|++|+.+.+.-....|+|+.|...+.+.++.  .||.....              ......   . ....
T Consensus       182 ~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~--~pf~~~~~--------------~~~~~~---~-~~~~  241 (285)
T 3is5_A          182 HSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGC--LPFTGTSL--------------EEVQQK---A-TYKE  241 (285)
T ss_dssp             -----CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSS--CSSCCSSH--------------HHHHHH---H-HHCC
T ss_pred             cCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCC--CCCCCCCH--------------HHHHhh---h-ccCC
Confidence            56677889999999644332222345555555555444433  23222111              000000   0 0000


Q ss_pred             cccccc-CcCCc---cccccccccCCCCchHHHHhhcCccee
Q 019481          242 ITFLSA-LKITG---CKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       242 ~~~~~~-~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ..+... ...+.   .+...||+.||.+|||++++++|||+.
T Consensus       242 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~  283 (285)
T 3is5_A          242 PNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFK  283 (285)
T ss_dssp             CCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGG
T ss_pred             cccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhh
Confidence            000000 11111   234478999999999999999999993

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=4.5e-39  Score=301.73  Aligned_cols=187  Identities=17%  Similarity=0.095  Sum_probs=143.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|++... ......+.+.+|+.+|+.++||||++++++|...... .+....+++|||++
T Consensus        72 ~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~-~~~~~~~lv~E~~~  150 (464)
T 3ttj_A           72 SGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQDVYLVMELMD  150 (464)
T ss_dssp             ECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCST-TTCCEEEEEEECCS
T ss_pred             cCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcc-ccCCeEEEEEeCCC
Confidence            589999999999999999999999753 2344567788999999999999999999988654322 23446789999997


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      + +|.+.+..  .     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++++||+|||+|+........
T Consensus       151 ~-~l~~~~~~--~-----l~~~~~~~~~~qil~aL~~lH~--~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  220 (464)
T 3ttj_A          151 A-NLCQVIQM--E-----LDHERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM  220 (464)
T ss_dssp             E-EHHHHHTS--C-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCGGGEEECTTSCEEECCCCCC-----CCCC
T ss_pred             C-CHHHHHhh--c-----CCHHHHHHHHHHHHHHHHHHHH--CCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCccc
Confidence            5 67777753  2     8999999999999999999999  78999999999999999999999999999987766666


Q ss_pred             ceeeccceeeccCccccchhh-hhHhHhCCcccccccccc
Q 019481          164 LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~  202 (340)
                      ...+||+.|+|||.+.+.++. ..|+|+.|...+.+..+.
T Consensus       221 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~  260 (464)
T 3ttj_A          221 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK  260 (464)
T ss_dssp             ----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             CCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCC
Confidence            678899999999654433322 235666555555554443

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=6e-40  Score=287.57  Aligned_cols=241  Identities=13%  Similarity=0.055  Sum_probs=177.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|.+.... ....+.+.+|++++++++||||++++++|.       +....+++|||+++
T Consensus        19 ~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~~~~   90 (277)
T 3f3z_A           19 RGSWGEVKIAVQKGTRIRRAAKKIPKYF-VEDVDRFKQEIEIMKSLDHPNIIRLYETFE-------DNTDIYLVMELCTG   90 (277)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEE-------CSSEEEEEEECCCS
T ss_pred             ecCCEEEEEEEeCCCCcEEEEEeehhhc-cchHHHHHHHHHHHHhCCCCCEeeEEEEEe-------cCCeEEEEEeccCC
Confidence            5899999999999999999999997532 234567899999999999999999999775       34467899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEe---cCCCceEEeccccceeecccC
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILL---DETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl---~~~~~~kl~DFGla~~~~~~~  161 (340)
                      ++|.+++.....     +++..+..++.|++.||+|||+  ++|+||||||+||++   +.++.+||+|||+++......
T Consensus        91 ~~L~~~~~~~~~-----~~~~~~~~i~~~i~~~l~~lH~--~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~  163 (277)
T 3f3z_A           91 GELFERVVHKRV-----FRESDAARIMKDVLSAVAYCHK--LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK  163 (277)
T ss_dssp             CBHHHHHHHHCS-----CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred             CcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence            999999988765     9999999999999999999999  889999999999999   788999999999999887766


Q ss_pred             CcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      ......||+.|++|+...+..-...|+|+.|...+.+.++.  .||...........+..+...++              
T Consensus       164 ~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~--~p~~~~~~~~~~~~~~~~~~~~~--------------  227 (277)
T 3f3z_A          164 MMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGY--PPFSAPTDSEVMLKIREGTFTFP--------------  227 (277)
T ss_dssp             CBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSS--CSSCCSSHHHHHHHHHHCCCCCC--------------
T ss_pred             chhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCC--CCCCCCCHHHHHHHHHhCCCCCC--------------
Confidence            66677899999998644332222345555555555444433  22222111100000000000000              


Q ss_pred             ccccccCcCCc---cccccccccCCCCchHHHHhhcCcce
Q 019481          242 ITFLSALKITG---CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       242 ~~~~~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                        ....+..+.   .+...||+.||.+|||++++++|||+
T Consensus       228 --~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~  265 (277)
T 3f3z_A          228 --EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWF  265 (277)
T ss_dssp             --HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHH
T ss_pred             --chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHH
Confidence              000011111   23447899999999999999999999

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=3.8e-39  Score=296.22  Aligned_cols=184  Identities=14%  Similarity=0.088  Sum_probs=148.0

Q ss_pred             cceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccCC
Q 019481            7 SFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKK   85 (340)
Q Consensus         7 ~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~g   85 (340)
                      +||.||+|++..+++.||+|+++.. ......+.+.+|++++++++||||++++++|..       ....+++|||+++|
T Consensus        39 ~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------~~~~~lv~e~~~~~  111 (389)
T 3gni_B           39 DLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA-------DNELWVVTSFMAYG  111 (389)
T ss_dssp             TTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------TTEEEEEEECCTTC
T ss_pred             CceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEE-------CCEEEEEEEccCCC
Confidence            8999999999999999999999863 234456778899999999999999999997763       34678999999999


Q ss_pred             CHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC----
Q 019481           86 GLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN----  161 (340)
Q Consensus        86 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~----  161 (340)
                      +|.+++.....   ..+++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||.+.......    
T Consensus       112 ~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~--~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~  186 (389)
T 3gni_B          112 SAKDLICTHFM---DGMNELAIAYILQGVLKALDYIHH--MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQR  186 (389)
T ss_dssp             BHHHHHHHTCT---TCCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECS
T ss_pred             CHHHHHhhhcc---cCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCCEEEcccccceeecccccccc
Confidence            99999987633   349999999999999999999999  889999999999999999999999999987553321    


Q ss_pred             ----CcceeeccceeeccCcccc--chh-hhhHhHhCCcccccccccc
Q 019481          162 ----ADLTALDTSSVSAQSGKTG--MEM-KMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       162 ----~~~~~~gt~~~~~p~~~~~--~~~-~~~~~~s~g~~~~~~~~~~  202 (340)
                          .....+||+.|+||+.+.+  ..+ ...|+|+.|...+.+.++.
T Consensus       187 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~  234 (389)
T 3gni_B          187 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGH  234 (389)
T ss_dssp             CBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             ccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCC
Confidence                1223468888999865443  111 1346777676666665544

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=1.1e-40  Score=314.84  Aligned_cols=241  Identities=14%  Similarity=0.127  Sum_probs=177.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|++....  .....+.+.+|++++++++||||++++++|.       +....++++||+
T Consensus        36 ~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-------~~~~~~lv~e~~  108 (484)
T 3nyv_A           36 KGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE-------DKGYFYLVGEVY  108 (484)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEE-------CSSEEEEEECCC
T ss_pred             cCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEE-------eCCEEEEEEecC
Confidence            5899999999999999999999997532  2345677899999999999999999999775       445788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEe---cCCCceEEeccccceeecc
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILL---DETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl---~~~~~~kl~DFGla~~~~~  159 (340)
                      ++|+|.+.+.....     +++..++.++.||+.||+|||+  ++|+||||||+|||+   +.++.+||+|||+|+....
T Consensus       109 ~~~~L~~~~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~--~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~  181 (484)
T 3nyv_A          109 TGGELFDEIISRKR-----FSEVDAARIIRQVLSGITYMHK--NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA  181 (484)
T ss_dssp             CSCBHHHHHHTCSC-----CBHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred             CCCCHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence            99999999988765     9999999999999999999999  889999999999999   4678999999999988776


Q ss_pred             cCCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          160 ENADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      .......+||+.|+||+.+.+.--...|+|+.|...+.+.++.  .||.......+             . .    ....
T Consensus       182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~--~pf~~~~~~~~-------------~-~----~i~~  241 (484)
T 3nyv_A          182 SKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGC--PPFNGANEYDI-------------L-K----KVEK  241 (484)
T ss_dssp             CCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSS--CSSCCSSHHHH-------------H-H----HHHH
T ss_pred             ccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCC--CCCCCCCHHHH-------------H-H----HHHc
Confidence            6666677899999999644332122335555555544444333  22222111000             0 0    0000


Q ss_pred             hhcccccc--CcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          240 STITFLSA--LKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       240 ~~~~~~~~--~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ....+..+  ..++   .++...||+.||.+|||++++++|||+.
T Consensus       242 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~  286 (484)
T 3nyv_A          242 GKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ  286 (484)
T ss_dssp             CCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHH
T ss_pred             CCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhc
Confidence            00011000  1111   1234478999999999999999999993

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=3.5e-39  Score=287.62  Aligned_cols=238  Identities=17%  Similarity=0.110  Sum_probs=166.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||+||+|++..+++.||+|++... ..........+|+..+.++ +||||++++++|..       ....++++||+
T Consensus        67 ~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~-------~~~~~lv~e~~  139 (311)
T 3p1a_A           67 HGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE-------GGILYLQTELC  139 (311)
T ss_dssp             EETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------TTEEEEEEECC
T ss_pred             cCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe-------CCEEEEEEecc
Confidence            589999999999999999999998652 2334445566677666666 89999999997753       34678999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                       +|+|.+++.....    .+++..++.++.||+.||+|||+  ++|+||||||+|||++.++++||+|||+++.......
T Consensus       140 -~~~L~~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~--~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~  212 (311)
T 3p1a_A          140 -GPSLQQHCEAWGA----SLPEAQVWGYLRDTLLALAHLHS--QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGA  212 (311)
T ss_dssp             -CCBHHHHHHHHCS----CCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred             -CCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHH--CCEecCCCCHHHEEECCCCCEEEccceeeeecccCCC
Confidence             6799999887654    49999999999999999999999  7899999999999999999999999999988876666


Q ss_pred             cceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhc
Q 019481          163 DLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTI  242 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  242 (340)
                      .....||+.|+|||.+.+.--...|+|+.|...+++.++.. .++.......+.....  ...+                
T Consensus       213 ~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~-~~~~~~~~~~~~~~~~--~~~~----------------  273 (311)
T 3p1a_A          213 GEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNME-LPHGGEGWQQLRQGYL--PPEF----------------  273 (311)
T ss_dssp             --CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCC-CCSSHHHHHHHTTTCC--CHHH----------------
T ss_pred             CcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCC-CCCCccHHHHHhccCC--Cccc----------------
Confidence            66678999999997544322223355555554444433210 1110000000000000  0000                


Q ss_pred             cccccCcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          243 TFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       243 ~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                          ....+   ..+...||+.||.+|||++++++|||+.
T Consensus       274 ----~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~  309 (311)
T 3p1a_A          274 ----TAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLR  309 (311)
T ss_dssp             ----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGS
T ss_pred             ----ccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCcccc
Confidence                01111   1234478999999999999999999993

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=3.1e-40  Score=301.08  Aligned_cols=238  Identities=16%  Similarity=0.082  Sum_probs=164.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHH-hhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDS-LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~-l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||+|+++.+++.||+|++++..  .....+.+.+|..+ ++.++||||++++++|+       +....|++|||
T Consensus        48 ~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~-------~~~~~~lv~E~  120 (373)
T 2r5t_A           48 KGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQ-------TADKLYFVLDY  120 (373)
T ss_dssp             CCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEE-------CSSEEEEEEEC
T ss_pred             eCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEE-------eCCEEEEEEeC
Confidence            6899999999999999999999998632  22334556778777 57789999999999776       34478899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec-cc
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA-VE  160 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~-~~  160 (340)
                      ++||+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.+|++||+|||+|+... ..
T Consensus       121 ~~gg~L~~~l~~~~~-----~~~~~~~~~~~qi~~aL~~LH~--~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~  193 (373)
T 2r5t_A          121 INGGELFYHLQRERC-----FLEPRARFYAAEIASALGYLHS--LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN  193 (373)
T ss_dssp             CCSCBHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred             CCCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence            999999999988665     9999999999999999999999  889999999999999999999999999998643 34


Q ss_pred             CCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      ....+.+||+.|+|||.+.+.++. ..|+|+.|...+.+.++.  .||......              .....    .. 
T Consensus       194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~--~Pf~~~~~~--------------~~~~~----i~-  252 (373)
T 2r5t_A          194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGL--PPFYSRNTA--------------EMYDN----IL-  252 (373)
T ss_dssp             CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS--CTTCCSBHH--------------HHHHH----HH-
T ss_pred             CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCC--CCCCCCCHH--------------HHHHH----HH-
Confidence            445677899999999644332221 235555444444443333  232221110              00000    00 


Q ss_pred             hhccccccCcCCc---cccccccccCCCCchHH----HHhhcCcce
Q 019481          240 STITFLSALKITG---CKSEEGYKNNSSLNPIC----QIVNQHPFY  278 (340)
Q Consensus       240 ~~~~~~~~~~~p~---~~~~~~l~~dP~~R~t~----~~ll~hp~~  278 (340)
                       .-...-.+.++.   ++...||++||.+||++    +++++|||+
T Consensus       253 -~~~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f  297 (373)
T 2r5t_A          253 -NKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFF  297 (373)
T ss_dssp             -HSCCCCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGG
T ss_pred             -hcccCCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccc
Confidence             001111122221   23446799999999996    599999999

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=3.6e-39  Score=287.02  Aligned_cols=187  Identities=18%  Similarity=0.119  Sum_probs=143.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc----hhhHHHHHHHHHHhhhcC---CCccccccccccccccccCCcceee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP----LQLRRDDDGKLDSLEEIF---HPNQVKPSGYWSMNICLTGDRRYCW   76 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~~~E~~~l~~l~---hpnIv~l~~~f~~~~~~~~~~~~~~   76 (340)
                      ..|+||.||+|++..+++.||+|++.....    ......+.+|++++++++   ||||++++++|....  .......+
T Consensus        18 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~--~~~~~~~~   95 (308)
T 3g33_A           18 GVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR--TDREIKVT   95 (308)
T ss_dssp             CCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC--SSSEEEEE
T ss_pred             ecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC--CCCceeEE
Confidence            368999999999999999999999974221    112345677888777765   999999999876431  11223578


Q ss_pred             eeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481           77 KNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus        77 ~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      +++||+. |+|.+++.....   ..+++..++.++.||+.||+|||+  ++|+||||||+|||++.++++||+|||+|+.
T Consensus        96 lv~e~~~-~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~--~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~  169 (308)
T 3g33_A           96 LVFEHVD-QDLRTYLDKAPP---PGLPAETIKDLMRQFLRGLDFLHA--NCIVHRDLKPENILVTSGGTVKLADFGLARI  169 (308)
T ss_dssp             EEEECCC-CBHHHHHHTCCT---TCSCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCTTTEEECTTSCEEECSCSCTTT
T ss_pred             EEehhhh-cCHHHHHhhccC---CCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEEcCCCCEEEeeCccccc
Confidence            9999997 599999987664   359999999999999999999999  8899999999999999999999999999987


Q ss_pred             ecccCCcceeeccceeeccCccccchhh-hhHhHhCCcccccc
Q 019481          157 SAVENADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDE  198 (340)
Q Consensus       157 ~~~~~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~  198 (340)
                      ..........+||+.|+|||.+.+..+. ..|+|+.|...+.+
T Consensus       170 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l  212 (308)
T 3g33_A          170 YSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM  212 (308)
T ss_dssp             STTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHT
T ss_pred             cCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHH
Confidence            7666666667889989988543222111 23455544444443

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=2e-39  Score=289.94  Aligned_cols=188  Identities=17%  Similarity=0.097  Sum_probs=145.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|+++........+.+.+|++++++++||||++++++|.       +.+..+++|||++ 
T Consensus        15 ~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-------~~~~~~lv~e~~~-   86 (317)
T 2pmi_A           15 NGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIH-------TENKLTLVFEFMD-   86 (317)
T ss_dssp             ----CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEEC-------CTTEEEEEEECCC-
T ss_pred             CCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEE-------ECCeEEEEEEecC-
Confidence            68999999999999999999999986544444567889999999999999999999765       3447889999998 


Q ss_pred             CCHHHHhcccCCC-ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-CC
Q 019481           85 KGLENVHIGEHPA-SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-NA  162 (340)
Q Consensus        85 gsL~~~l~~~~~~-~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~~  162 (340)
                      |+|.+++...... ....+++..+..++.||++||+|||+  ++|+||||||+|||++.++++||+|||+++..... ..
T Consensus        87 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~  164 (317)
T 2pmi_A           87 NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE--NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT  164 (317)
T ss_dssp             CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCC
T ss_pred             CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH--CCeeeCCCChHHeEEcCCCCEEECcCccceecCCCccc
Confidence            5999998754311 11248999999999999999999999  88999999999999999999999999999876543 22


Q ss_pred             cceeeccceeeccCccccch--hhhhHhHhCCcccccccccc
Q 019481          163 DLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~  202 (340)
                      .....||+.|+|||.+.+..  -...|+|+.|...+.+.++.
T Consensus       165 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~  206 (317)
T 2pmi_A          165 FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK  206 (317)
T ss_dssp             CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            34557888899986544321  12346666666665555444

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.2e-39  Score=299.47  Aligned_cols=185  Identities=17%  Similarity=0.090  Sum_probs=141.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|++..+++.||+|++... ......+.+.+|+.+++++. ||||++++++|..     .+...++++|||
T Consensus        18 G~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~-----~~~~~~~lv~e~   92 (388)
T 3oz6_A           18 GKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRA-----DNDRDVYLVFDY   92 (388)
T ss_dssp             ------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----TTSSCEEEEEEC
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEec-----CCCCEEEEEecc
Confidence            3689999999999999999999998652 33455677889999999997 9999999997753     244468899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-  160 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-  160 (340)
                      |+ |+|.++++.. .     +++..+..++.||+.||+|||+  .+|+||||||+|||++.++.+||+|||+|+.+... 
T Consensus        93 ~~-~~L~~~~~~~-~-----~~~~~~~~i~~qi~~~L~~LH~--~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  163 (388)
T 3oz6_A           93 ME-TDLHAVIRAN-I-----LEPVHKQYVVYQLIKVIKYLHS--GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR  163 (388)
T ss_dssp             CS-EEHHHHHHHT-C-----CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred             cC-cCHHHHHHcC-C-----CCHHHHHHHHHHHHHHHHHHHh--CCEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence            97 5999999864 2     8999999999999999999999  77999999999999999999999999999876431 


Q ss_pred             ---------------------CCcceeeccceeeccCccccc-hh-hhhHhHhCCcccccccccc
Q 019481          161 ---------------------NADLTALDTSSVSAQSGKTGM-EM-KMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       161 ---------------------~~~~~~~gt~~~~~p~~~~~~-~~-~~~~~~s~g~~~~~~~~~~  202 (340)
                                           ......+||+.|+|||.+.+. .+ ...|+|+.|...+.+.++.
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~  228 (388)
T 3oz6_A          164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK  228 (388)
T ss_dssp             CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCC
Confidence                                 112345789999999755431 11 1346676666666655544

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=3e-39  Score=297.65  Aligned_cols=245  Identities=16%  Similarity=0.090  Sum_probs=167.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhh-cCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEE-IFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|+++.      ...+.+|++++.+ .+||||++++++|..   ...+..+.+++|||++
T Consensus        72 ~G~~g~V~~~~~~~~~~~vAiK~~~~------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~---~~~~~~~~~lv~E~~~  142 (400)
T 1nxk_A           72 LGINGKVLQIFNKRTQEKFALKMLQD------CPKARREVELHWRASQCPHIVRIVDVYEN---LYAGRKCLLIVMECLD  142 (400)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEEC------SHHHHHHHHHHHHHTTSTTBCCEEEEEEE---EETTEEEEEEEEECCC
T ss_pred             eccCeEEEEEEECCCCCEEEEEEeCc------chhHHHHHHHHHHhcCCCCcceEeEEEee---cccCCcEEEEEEEeCC
Confidence            58999999999999999999999963      1346788888754 489999999998763   1234557889999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC---CCceEEeccccceeeccc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE---TFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~---~~~~kl~DFGla~~~~~~  160 (340)
                      ||+|.+++.....   ..+++..++.++.||+.||+|||+  ++|+||||||+|||++.   ++.+||+|||+++.....
T Consensus       143 gg~L~~~l~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~--~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  217 (400)
T 1nxk_A          143 GGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH  217 (400)
T ss_dssp             SEEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--
T ss_pred             CCcHHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHH--CCccccCcCcceEEEecCCCCccEEEEecccccccCCC
Confidence            9999999987643   359999999999999999999999  77999999999999998   789999999999987665


Q ss_pred             CCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      ....+.+||+.|+|||.+.+..+. ..|+|+.|...+.+.++.  .||...........+.          ..    ...
T Consensus       218 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~--~pf~~~~~~~~~~~~~----------~~----i~~  281 (400)
T 1nxk_A          218 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY--PPFYSNHGLAISPGMK----------TR----IRM  281 (400)
T ss_dssp             ---------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSS--CSCCCCTTCSSCCSHH----------HH----HHH
T ss_pred             CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCC--CCCCCCccccccHHHH----------HH----HHc
Confidence            556678899999999755432222 236666666665554443  3333221111100000          00    000


Q ss_pred             hhccccc--cCcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          240 STITFLS--ALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       240 ~~~~~~~--~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ....+..  ...++   .++...||+.||.+|||++++++|||+.
T Consensus       282 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~  326 (400)
T 1nxk_A          282 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM  326 (400)
T ss_dssp             TCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred             CcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccc
Confidence            0000000  01111   1234478999999999999999999994

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=2.5e-39  Score=288.55  Aligned_cols=183  Identities=18%  Similarity=0.151  Sum_probs=144.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++. +++.||+|++.... .....+.+.+|++++++++||||++++++|.       +....+++|||++
T Consensus        31 ~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-------~~~~~~lv~e~~~  102 (311)
T 3niz_A           31 EGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIH-------SERCLTLVFEFME  102 (311)
T ss_dssp             ECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEEC-------CSSCEEEEEECCS
T ss_pred             CCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEc-------cCCEEEEEEcCCC
Confidence            5899999999985 48899999997532 2233467889999999999999999999765       4447789999998


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-CC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-NA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~~  162 (340)
                      + +|.+.+.....    .+++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+|+..... ..
T Consensus       103 ~-~l~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~LH~--~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~  175 (311)
T 3niz_A          103 K-DLKKVLDENKT----GLQDSQIKIYLYQLLRGVAHCHQ--HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS  175 (311)
T ss_dssp             E-EHHHHHHTCTT----CCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred             C-CHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCchHhEEECCCCCEEEccCcCceecCCCccc
Confidence            5 88888877654    49999999999999999999999  88999999999999999999999999999877543 22


Q ss_pred             cceeeccceeeccCccccch--hhhhHhHhCCcccccccccc
Q 019481          163 DLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~  202 (340)
                      .....||+.|+|||.+.+..  -...|+|+.|...+.+.++.
T Consensus       176 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~  217 (311)
T 3niz_A          176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK  217 (311)
T ss_dssp             --CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCC
Confidence            34457899999997554322  12347777777776665554

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=8.6e-40  Score=287.53  Aligned_cols=242  Identities=13%  Similarity=0.060  Sum_probs=176.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|++... ......+.+.+|++++++++||||+++++++.       +....++++||++
T Consensus        16 ~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~~v~e~~~   88 (284)
T 3kk8_A           16 KGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ-------EESFHYLVFDLVT   88 (284)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-------CSSEEEEEECCCC
T ss_pred             CcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEE-------cCCEEEEEEecCC
Confidence            589999999999999999999999753 33445677899999999999999999999765       4446789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCc---eEEeccccceeeccc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFK---CNLSDFSTAKVSAVE  160 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~---~kl~DFGla~~~~~~  160 (340)
                      +|+|.+.+.....     +++..+..++.|++.||+|||+  ++|+||||||+||+++.++.   +||+|||++......
T Consensus        89 ~~~l~~~~~~~~~-----~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~  161 (284)
T 3kk8_A           89 GGELFEDIVAREF-----YSEADASHCIQQILESIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS  161 (284)
T ss_dssp             SCBHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHH--TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred             CCCHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence            9999999987765     9999999999999999999999  78999999999999987655   999999999887766


Q ss_pred             CCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      .......||+.|++|+...+..+. ..|+|+.|...+.+.++.  .||......              .....    ...
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~--~pf~~~~~~--------------~~~~~----~~~  221 (284)
T 3kk8_A          162 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY--PPFWDEDQH--------------RLYAQ----IKA  221 (284)
T ss_dssp             CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS--CSSCCSSHH--------------HHHHH----HHH
T ss_pred             ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCC--CCCCCCchh--------------HHHHH----HHh
Confidence            555567889999998644332221 235555555554444333  222111110              00000    000


Q ss_pred             hhccccc--cCcCCc---cccccccccCCCCchHHHHhhcCcceee
Q 019481          240 STITFLS--ALKITG---CKSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       240 ~~~~~~~--~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                      ....+..  ....+.   .+...||+.||++|||++++++|||+..
T Consensus       222 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~  267 (284)
T 3kk8_A          222 GAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN  267 (284)
T ss_dssp             TCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHS
T ss_pred             ccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccC
Confidence            0000000  011111   2334789999999999999999999943

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=1.1e-38  Score=285.52  Aligned_cols=239  Identities=17%  Similarity=0.127  Sum_probs=172.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|+++... ....+.+.+|+.++++++||||++++++|..       ....+++|||+++
T Consensus        55 ~G~~g~V~~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------~~~~~lv~e~~~~  126 (321)
T 2c30_A           55 EGSTGIVCLAREKHSGRQVAVKMMDLRK-QQRRELLFNEVVIMRDYQHFNVVEMYKSYLV-------GEELWVLMEFLQG  126 (321)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEETTT-CCSHHHHHHHHHHHTTCCCTTBCCEEEEEEE-------TTEEEEEECCCCS
T ss_pred             cCCCeEEEEEEECCCCcEEEEEEEeccc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEE-------CCEEEEEEecCCC
Confidence            5899999999999999999999997533 2345678899999999999999999997753       3367899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-Cc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-AD  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~~  163 (340)
                      |+|.+++... .     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++++||+|||+++...... ..
T Consensus       127 ~~L~~~l~~~-~-----l~~~~~~~i~~qi~~~L~~LH~--~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~  198 (321)
T 2c30_A          127 GALTDIVSQV-R-----LNEEQIATVCEAVLQALAYLHA--QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR  198 (321)
T ss_dssp             CBHHHHHTTC-C-----CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCB
T ss_pred             CCHHHHHHhc-C-----CCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcccc
Confidence            9999998753 2     8999999999999999999999  889999999999999999999999999998776543 33


Q ss_pred             ceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhc
Q 019481          164 LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTI  242 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  242 (340)
                      ....||+.|+||+...+..+. ..|+|+.|...+.+.++.                     .||................
T Consensus       199 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~---------------------~pf~~~~~~~~~~~~~~~~  257 (321)
T 2c30_A          199 KSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE---------------------PPYFSDSPVQAMKRLRDSP  257 (321)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS---------------------CTTTTSCHHHHHHHHHHSS
T ss_pred             ccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCC---------------------CCCCCCCHHHHHHHHhcCC
Confidence            456789989988543322111 235555444444443333                     2221110000000000000


Q ss_pred             --cccccCcCC---ccccccccccCCCCchHHHHhhcCcceee
Q 019481          243 --TFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       243 --~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                        ........+   ..+...||+.||++|||++++++|||+..
T Consensus       258 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~  300 (321)
T 2c30_A          258 PPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQ  300 (321)
T ss_dssp             CCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGG
T ss_pred             CCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcc
Confidence              000011111   12344789999999999999999999943

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=2.8e-39  Score=292.73  Aligned_cols=239  Identities=15%  Similarity=0.101  Sum_probs=156.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|+++..   ...+.+.+|++++++++||||++++++|.       +....+++|||+++
T Consensus        63 ~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~-------~~~~~~lv~e~~~~  132 (349)
T 2w4o_A           63 RGATSIVYRCKQKGTQKPYALKVLKKT---VDKKIVRTEIGVLLRLSHPNIIKLKEIFE-------TPTEISLVLELVTG  132 (349)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEE-------CSSEEEEEECCCCS
T ss_pred             eCCCEEEEEEEECCCCcEEEEEEeccc---hhHHHHHHHHHHHHhCCCCCCcceeeeEe-------cCCeEEEEEEeCCC
Confidence            589999999999999999999999743   23456889999999999999999999775       34467899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC---CCceEEeccccceeecccC
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE---TFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~---~~~~kl~DFGla~~~~~~~  161 (340)
                      |+|.+++.....     +++..+..++.||+.||+|||+  ++|+||||||+|||++.   ++.+||+|||+++......
T Consensus       133 ~~L~~~l~~~~~-----~~~~~~~~i~~qi~~~L~~LH~--~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~  205 (349)
T 2w4o_A          133 GELFDRIVEKGY-----YSERDAADAVKQILEAVAYLHE--NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV  205 (349)
T ss_dssp             CBHHHHHTTCSS-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred             CCHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc
Confidence            999999987665     9999999999999999999999  78999999999999975   8999999999998776655


Q ss_pred             CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      .....+||+.|++||...+..+. ..|+|+.|...+.+.++.  .||......              .....   .....
T Consensus       206 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~--~pf~~~~~~--------------~~~~~---~i~~~  266 (349)
T 2w4o_A          206 LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGF--EPFYDERGD--------------QFMFR---RILNC  266 (349)
T ss_dssp             -------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS--CTTCCTTCH--------------HHHHH---HHHTT
T ss_pred             ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCC--CCCCCCccc--------------HHHHH---HHHhC
Confidence            55567899999999644332211 235555555554443333  222111100              00000   00000


Q ss_pred             hccccc--cCcCCc---cccccccccCCCCchHHHHhhcCccee
Q 019481          241 TITFLS--ALKITG---CKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       241 ~~~~~~--~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ...+..  .+..+.   ++...||+.||++|||++++++|||+.
T Consensus       267 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  310 (349)
T 2w4o_A          267 EYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVT  310 (349)
T ss_dssp             CCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTT
T ss_pred             CCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccC
Confidence            000000  011111   234578999999999999999999993

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=5.4e-39  Score=281.63  Aligned_cols=241  Identities=15%  Similarity=0.154  Sum_probs=161.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc--hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP--LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|+++....  ....+.+.+|++++++++||||++++++|.       +....++++||+
T Consensus        21 ~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~~   93 (278)
T 3cok_A           21 KGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFE-------DSNYVYLVLEMC   93 (278)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEE-------CSSEEEEEEECC
T ss_pred             CCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEc-------cCCeEEEEEecC
Confidence            58999999999999999999999974221  122467899999999999999999999765       344788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-C
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-N  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~  161 (340)
                      ++++|.+++.....    .+++..++.++.|+++||+|||+  ++|+||||||+||+++.++++||+|||++...... .
T Consensus        94 ~~~~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~  167 (278)
T 3cok_A           94 HNGEMNRYLKNRVK----PFSENEARHFMHQIITGMLYLHS--HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE  167 (278)
T ss_dssp             TTEEHHHHHHTCSS----CCCHHHHHHHHHHHHHHHHHHHH--TTEECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred             CCCcHHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence            99999999987643    39999999999999999999999  88999999999999999999999999999876542 2


Q ss_pred             CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      ......||+.|++|+...+.... ..|+|+.|...+.+.++.  .||...........+.......+             
T Consensus       168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~--~p~~~~~~~~~~~~~~~~~~~~~-------------  232 (278)
T 3cok_A          168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGR--PPFDTDTVKNTLNKVVLADYEMP-------------  232 (278)
T ss_dssp             ------------------------CTHHHHHHHHHHHHHHSS--CSSCCCSCC-----CCSSCCCCC-------------
T ss_pred             cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCC--CCCCChhHHHHHHHHhhcccCCc-------------
Confidence            33456789999999754432221 236666666655554443  33332222111111111110000             


Q ss_pred             hccccccCcCC---ccccccccccCCCCchHHHHhhcCcceee
Q 019481          241 TITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       241 ~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                             ...+   ..+...||+.||.+|||++++++|||+..
T Consensus       233 -------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~  268 (278)
T 3cok_A          233 -------SFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSR  268 (278)
T ss_dssp             -------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC-
T ss_pred             -------cccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccC
Confidence                   0001   12334779999999999999999999943

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=2e-39  Score=316.66  Aligned_cols=234  Identities=13%  Similarity=0.051  Sum_probs=175.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||+|++..+++.||+|++++..  .....+.+.+|.+++..+ +||||++++++|+       +....|++|||
T Consensus       351 ~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~-------~~~~~~lV~E~  423 (674)
T 3pfq_A          351 KGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ-------TMDRLYFVMEY  423 (674)
T ss_dssp             BTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECB-------CSSEEEEEEEC
T ss_pred             cCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEE-------eCCEEEEEEeC
Confidence            6899999999999999999999997521  223446678899999988 6999999999775       44478899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec-cc
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA-VE  160 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~-~~  160 (340)
                      ++||+|.+++...+.     +++..++.|+.||+.||+|||+  ++|+||||||+|||++.+|++||+|||+|+... ..
T Consensus       424 ~~gg~L~~~l~~~~~-----~~~~~~~~~~~qi~~aL~~LH~--~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~  496 (674)
T 3pfq_A          424 VNGGDLMYHIQQVGR-----FKEPHAVFYAAEIAIGLFFLQS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG  496 (674)
T ss_dssp             CCSCBHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHH--TSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT
T ss_pred             cCCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCeEeccCChhhEEEcCCCcEEEeecceeeccccCC
Confidence            999999999998766     9999999999999999999999  889999999999999999999999999998643 34


Q ss_pred             CCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      ....+.+||+.|+|||.+.+.++- ..|+|+.|...+++.++.  .||.......+...+.                   
T Consensus       497 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~--~Pf~~~~~~~~~~~i~-------------------  555 (674)
T 3pfq_A          497 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ--APFEGEDEDELFQSIM-------------------  555 (674)
T ss_dssp             CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSS--CSSCCSSHHHHHHHHH-------------------
T ss_pred             cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCC--CCCCCCCHHHHHHHHH-------------------
Confidence            455677899999999644332222 225555554444444333  3332221111111110                   


Q ss_pred             hhccccccCcCCccc-------cccccccCCCCchHH-----HHhhcCcce
Q 019481          240 STITFLSALKITGCK-------SEEGYKNNSSLNPIC-----QIVNQHPFY  278 (340)
Q Consensus       240 ~~~~~~~~~~~p~~~-------~~~~l~~dP~~R~t~-----~~ll~hp~~  278 (340)
                           ...+..|..+       ...+|++||++|+++     +++++|||+
T Consensus       556 -----~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff  601 (674)
T 3pfq_A          556 -----EHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFF  601 (674)
T ss_dssp             -----SSCCCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGG
T ss_pred             -----hCCCCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccc
Confidence                 1112223333       336799999999997     899999999

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=5.8e-40  Score=306.88  Aligned_cols=238  Identities=15%  Similarity=0.060  Sum_probs=162.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc--CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI--TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|+++..  ........+.+|++++++++||||++++++|..       ....+++|||+
T Consensus       158 ~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~-------~~~~~lv~e~~  230 (446)
T 4ejn_A          158 KGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT-------HDRLCFVMEYA  230 (446)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEE-------TTEEEEEECCC
T ss_pred             eCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEee-------CCEEEEEEeeC
Confidence            589999999999999999999999752  223344667899999999999999999997753       33678999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhc-CCCceecCCCCCCcEEecCCCceEEeccccceeecc-c
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHS-SEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-E  160 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-~  160 (340)
                      ++|+|.+++.....     +++..++.++.||+.||+|||+ .+  |+||||||+|||++.++++||+|||+|+.... .
T Consensus       231 ~~~~L~~~l~~~~~-----~~~~~~~~~~~qi~~aL~~LH~~~g--iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  303 (446)
T 4ejn_A          231 NGGELFFHLSRERV-----FSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG  303 (446)
T ss_dssp             SSCBHHHHHHHHSC-----CCHHHHHHHHHHHHHHHHHHHHHTC--CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred             CCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHhhcCC--EEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence            99999999987665     9999999999999999999996 44  99999999999999999999999999986433 3


Q ss_pred             CCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      ....+.+||+.|+||+.+.+..+. ..|+|+.|...+.+.++.  .||......              .....    .. 
T Consensus       304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~--~Pf~~~~~~--------------~~~~~----i~-  362 (446)
T 4ejn_A          304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE--------------KLFEL----IL-  362 (446)
T ss_dssp             ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSS--CSSCCSSHH--------------HHHHH----HH-
T ss_pred             cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCC--CCCCCCCHH--------------HHHHH----HH-
Confidence            344567899999999643322221 235555554444443333  332221110              00000    00 


Q ss_pred             hhccccccCcCC---ccccccccccCCCCch-----HHHHhhcCcce
Q 019481          240 STITFLSALKIT---GCKSEEGYKNNSSLNP-----ICQIVNQHPFY  278 (340)
Q Consensus       240 ~~~~~~~~~~~p---~~~~~~~l~~dP~~R~-----t~~~ll~hp~~  278 (340)
                       .-...-+..++   ..+...||+.||.+||     +++++++|||+
T Consensus       363 -~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f  408 (446)
T 4ejn_A          363 -MEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF  408 (446)
T ss_dssp             -HCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGG
T ss_pred             -hCCCCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccc
Confidence             00000011111   1234477999999999     99999999999

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=5.2e-39  Score=292.75  Aligned_cols=240  Identities=18%  Similarity=0.169  Sum_probs=175.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc-------hhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP-------LQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCW   76 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-------~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~   76 (340)
                      +|+||.||+|++..+|+.||+|+++....       ....+.+.+|+++++++ +||||++++++|..       ....+
T Consensus       104 ~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-------~~~~~  176 (365)
T 2y7j_A          104 RGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYES-------SSFMF  176 (365)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEB-------SSEEE
T ss_pred             cCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEee-------CCEEE
Confidence            58899999999999999999999875321       12245678999999999 79999999997753       34778


Q ss_pred             eeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481           77 KNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus        77 ~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      ++|||++||+|.+++.....     +++..+..++.||+.||+|||+  .+|+||||||+|||++.++.+||+|||++..
T Consensus       177 lv~e~~~g~~L~~~l~~~~~-----l~~~~~~~i~~qi~~~L~~LH~--~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~  249 (365)
T 2y7j_A          177 LVFDLMRKGELFDYLTEKVA-----LSEKETRSIMRSLLEAVSFLHA--NNIVHRDLKPENILLDDNMQIRLSDFGFSCH  249 (365)
T ss_dssp             EEECCCTTCBHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEeCCCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEECCCCCEEEEecCcccc
Confidence            99999999999999987655     9999999999999999999999  7899999999999999999999999999998


Q ss_pred             ecccCCcceeeccceeeccCccccc------hh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHH
Q 019481          157 SAVENADLTALDTSSVSAQSGKTGM------EM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNF  229 (340)
Q Consensus       157 ~~~~~~~~~~~gt~~~~~p~~~~~~------~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (340)
                      +.........+||+.|+||+.+.+.      .+ ...|+|+.|...+.+.++.  .||.......              .
T Consensus       250 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~--~pf~~~~~~~--------------~  313 (365)
T 2y7j_A          250 LEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGS--PPFWHRRQIL--------------M  313 (365)
T ss_dssp             CCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSS--CSSCCSSHHH--------------H
T ss_pred             cCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCC--CCCCCCCHHH--------------H
Confidence            8776666677899999988543211      00 1245555555555444433  2322111100              0


Q ss_pred             HHHHHHHHhhhhccccc--cCcCC---ccccccccccCCCCchHHHHhhcCcce
Q 019481          230 LYLLLIATLLSTITFLS--ALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       230 ~~~~~~~~~~~~~~~~~--~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ...  +  ......+..  ....+   ..+...||+.||.+|||++++++|||+
T Consensus       314 ~~~--i--~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f  363 (365)
T 2y7j_A          314 LRM--I--MEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFF  363 (365)
T ss_dssp             HHH--H--HHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGG
T ss_pred             HHH--H--HhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccc
Confidence            000  0  000000000  01111   123447899999999999999999998

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=1.4e-39  Score=292.25  Aligned_cols=238  Identities=18%  Similarity=0.103  Sum_probs=162.2

Q ss_pred             CCcceEEEEEEcC---CCCceEEEEEeeccC---chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeee
Q 019481            5 APSFSVLIHVPFP---DDRDDVMLKLHELIT---PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         5 ~G~fg~V~~~~~~---~~~~~vAiK~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      .|+||.||+|++.   .+++.||+|++++..   .......+.+|++++++++||||++++++|..       ....+++
T Consensus        27 ~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~~~~lv   99 (327)
T 3a62_A           27 KGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT-------GGKLYLI   99 (327)
T ss_dssp             EETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC-------SSCEEEE
T ss_pred             eCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc-------CCEEEEE
Confidence            5899999999985   688999999997532   12334567899999999999999999997753       4477899


Q ss_pred             eccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec
Q 019481           79 KWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      |||+++|+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++++||+|||+++...
T Consensus       100 ~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~qi~~al~~lH~--~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~  172 (327)
T 3a62_A          100 LEYLSGGELFMQLEREGI-----FMEDTACFYLAEISMALGHLHQ--KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI  172 (327)
T ss_dssp             EECCTTEEHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred             EeCCCCCcHHHHHHhCCC-----CCHHHHHHHHHHHHHHHHHHHh--CCEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence            999999999999987665     9999999999999999999999  889999999999999999999999999998654


Q ss_pred             c-cCCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHH
Q 019481          159 V-ENADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIA  236 (340)
Q Consensus       159 ~-~~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (340)
                      . .......+||+.|+||+...+..+. ..|+|+.|...+.+.++.  .||......              .....    
T Consensus       173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~--~pf~~~~~~--------------~~~~~----  232 (327)
T 3a62_A          173 HDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA--PPFTGENRK--------------KTIDK----  232 (327)
T ss_dssp             ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSS--CSCCCSSHH--------------HHHHH----
T ss_pred             cCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCC--CCCCCCCHH--------------HHHHH----
Confidence            3 2333456789989988644322211 235555555554444333  232221110              00000    


Q ss_pred             HhhhhccccccCcCCc---cccccccccCCCCch-----HHHHhhcCcce
Q 019481          237 TLLSTITFLSALKITG---CKSEEGYKNNSSLNP-----ICQIVNQHPFY  278 (340)
Q Consensus       237 ~~~~~~~~~~~~~~p~---~~~~~~l~~dP~~R~-----t~~~ll~hp~~  278 (340)
                        +.......++..+.   ++...||++||.+||     +++++++|||+
T Consensus       233 --i~~~~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f  280 (327)
T 3a62_A          233 --ILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFF  280 (327)
T ss_dssp             --HHHTCCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGG
T ss_pred             --HHhCCCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcc
Confidence              00001111111221   234478999999999     78899999999

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=2.1e-38  Score=286.07  Aligned_cols=238  Identities=17%  Similarity=0.178  Sum_probs=170.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|+++.+++.||+|++++..     ....+|++++.++ +||||++++++|.       +....+++|||++
T Consensus        32 ~G~~g~V~~~~~~~~~~~~avK~~~~~~-----~~~~~E~~~l~~~~~hp~iv~~~~~~~-------~~~~~~lv~E~~~   99 (342)
T 2qr7_A           32 VGSYSVCKRCIHKATNMEFAVKIIDKSK-----RDPTEEIEILLRYGQHPNIITLKDVYD-------DGKYVYVVTELMK   99 (342)
T ss_dssp             ECSSEEEEEEEETTTTEEEEEEEEETTT-----CCCHHHHHHHHHHTTSTTBCCEEEEEE-------CSSEEEEEECCCC
T ss_pred             eCCCEEEEEEEECCCCCEEEEEEEEccc-----CChHHHHHHHHHhcCCCCcCeEEEEEE-------cCCEEEEEEeCCC
Confidence            5899999999999999999999997532     1245789999888 7999999999775       4457889999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC-C---CceEEeccccceeecc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE-T---FKCNLSDFSTAKVSAV  159 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~-~---~~~kl~DFGla~~~~~  159 (340)
                      ||+|.+++.....     +++..+..++.||+.||+|||+  ++|+||||||+|||+.. +   +.+||+|||+++....
T Consensus       100 gg~L~~~i~~~~~-----~~~~~~~~~~~qi~~al~~lH~--~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~  172 (342)
T 2qr7_A          100 GGELLDKILRQKF-----FSEREASAVLFTITKTVEYLHA--QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA  172 (342)
T ss_dssp             SCBHHHHHHTCTT-----CCHHHHHHHHHHHHHHHHHHHH--TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred             CCcHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence            9999999988765     9999999999999999999999  88999999999999854 2   3599999999987755


Q ss_pred             c-CCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHH
Q 019481          160 E-NADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIAT  237 (340)
Q Consensus       160 ~-~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (340)
                      . ....+.+||+.|+|||.+.+.++. ..|+|+.|...+.+.++.  .||......           ........    .
T Consensus       173 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~--~Pf~~~~~~-----------~~~~~~~~----i  235 (342)
T 2qr7_A          173 ENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGY--TPFANGPDD-----------TPEEILAR----I  235 (342)
T ss_dssp             TTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSS--CSSCSSTTS-----------CHHHHHHH----H
T ss_pred             CCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCC--CCCCCCCcC-----------CHHHHHHH----H
Confidence            3 334567889999999654433222 236666666555554443  333221100           00001000    0


Q ss_pred             hhhhcccccc--CcCC---ccccccccccCCCCchHHHHhhcCcce
Q 019481          238 LLSTITFLSA--LKIT---GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       238 ~~~~~~~~~~--~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ..........  +.++   .++...||+.||.+|||++++++|||+
T Consensus       236 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~  281 (342)
T 2qr7_A          236 GSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI  281 (342)
T ss_dssp             HHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHH
T ss_pred             ccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCee
Confidence            0001111000  1111   123447899999999999999999999

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=5.7e-38  Score=276.86  Aligned_cols=243  Identities=15%  Similarity=0.113  Sum_probs=176.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|.+..+++.||+|++... ......+.+.+|++++++++||||++++++|...   ..+....++++||++
T Consensus        36 ~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~~~~~lv~e~~~  112 (290)
T 1t4h_A           36 RGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST---VKGKKCIVLVTELMT  112 (290)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEE---SSSCEEEEEEEECCC
T ss_pred             CCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccc---cCCCceEEEEEEecC
Confidence            589999999999999999999999753 3345567789999999999999999999987632   234557889999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCc--eecCCCCCCcEEec-CCCceEEeccccceeeccc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQ--VIYRDFKAPNILLD-ETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~--iiHrDlKp~NILl~-~~~~~kl~DFGla~~~~~~  160 (340)
                      +|+|.+++.....     +++..++.++.||+.||+|||+  ++  |+||||||+|||++ .++.+||+|||++..... 
T Consensus       113 ~~~L~~~l~~~~~-----~~~~~~~~~~~qi~~~l~~lH~--~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~-  184 (290)
T 1t4h_A          113 SGTLKTYLKRFKV-----MKIKVLRSWCRQILKGLQFLHT--RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA-  184 (290)
T ss_dssp             SCBHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHT--SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT-
T ss_pred             CCCHHHHHHHccC-----CCHHHHHHHHHHHHHHHHHHHc--CCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccc-
Confidence            9999999987665     9999999999999999999999  77  99999999999998 789999999999975433 


Q ss_pred             CCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      .......||+.|++|+.+.+.--...|+|+.|...+.+.++.  .||.....                .....  .....
T Consensus       185 ~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~--~pf~~~~~----------------~~~~~--~~~~~  244 (290)
T 1t4h_A          185 SFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSE--YPYSECQN----------------AAQIY--RRVTS  244 (290)
T ss_dssp             TSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSS--CTTTTCSS----------------HHHHH--HHHTT
T ss_pred             cccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCC--CCCCCcCc----------------HHHHH--HHHhc
Confidence            234456789999999754433222346666555555554433  22211100                00000  00000


Q ss_pred             hccc-cccCcCC---ccccccccccCCCCchHHHHhhcCcce
Q 019481          241 TITF-LSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~-~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .... ......+   ..+...||+.||.+|||++++++|||+
T Consensus       245 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f  286 (290)
T 1t4h_A          245 GVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF  286 (290)
T ss_dssp             TCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             cCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCccc
Confidence            0000 0000011   123447899999999999999999999

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=2e-38  Score=283.59  Aligned_cols=164  Identities=16%  Similarity=0.088  Sum_probs=141.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|+++........+.+.+|++++++++||||+++++++..     .+....+++|||+++
T Consensus        19 ~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~~~lv~e~~~~   93 (319)
T 4euu_A           19 QGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE-----TTTRHKVLIMEFCPC   93 (319)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----TTTCCEEEEEECCTT
T ss_pred             CCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeec-----CCCceEEEEEeCCCC
Confidence            589999999999999999999999864444456778899999999999999999997653     234467899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEe----cCCCceEEeccccceeeccc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILL----DETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl----~~~~~~kl~DFGla~~~~~~  160 (340)
                      |+|.+++.....  ...+++..++.++.||++||+|||+  ++|+||||||+|||+    +.++.+||+|||+|+.....
T Consensus        94 ~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~--~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~  169 (319)
T 4euu_A           94 GSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRE--NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD  169 (319)
T ss_dssp             CBHHHHHHSGGG--TTCCCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTT
T ss_pred             CCHHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHH--CCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCC
Confidence            999999987653  1348999999999999999999999  889999999999999    88889999999999988776


Q ss_pred             CCcceeeccceeeccCc
Q 019481          161 NADLTALDTSSVSAQSG  177 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~  177 (340)
                      .......||+.|+||+.
T Consensus       170 ~~~~~~~gt~~y~aPE~  186 (319)
T 4euu_A          170 EQFVSLYGTEEYLHPDM  186 (319)
T ss_dssp             CCBCCCCSCGGGCCHHH
T ss_pred             CceeecccCCCccCHHH
Confidence            66667788999998863

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=2.8e-39  Score=285.04  Aligned_cols=183  Identities=15%  Similarity=0.141  Sum_probs=140.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc-hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP-LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++ .+++.||+|++..... ....+.+.+|++++++++||||++++++|.       +....+++|||++
T Consensus        12 ~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------~~~~~~lv~e~~~   83 (288)
T 1ob3_A           12 EGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIH-------TKKRLVLVFEHLD   83 (288)
T ss_dssp             EETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEE-------CSSCEEEEEECCS
T ss_pred             cCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEc-------cCCeEEEEEEecC
Confidence            589999999998 6788999999975332 223467889999999999999999999775       3347789999997


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-CC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-NA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~~  162 (340)
                      + +|.+++.....    .+++..++.++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+++..... ..
T Consensus        84 ~-~l~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  156 (288)
T 1ob3_A           84 Q-DLKKLLDVCEG----GLESVTAKSFLLQLLNGIAYCHD--RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK  156 (288)
T ss_dssp             E-EHHHHHHTSTT----CCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred             C-CHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEEcCCCCEEEeECccccccCccccc
Confidence            5 99999987643    39999999999999999999999  88999999999999999999999999999866432 22


Q ss_pred             cceeeccceeeccCccccch--hhhhHhHhCCcccccccccc
Q 019481          163 DLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~  202 (340)
                      .....||+.|+|||...+..  -...|+|+.|...+.+.++.
T Consensus       157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~  198 (288)
T 1ob3_A          157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT  198 (288)
T ss_dssp             -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            33457888888886543321  11346666665555554443

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=3.1e-38  Score=299.52  Aligned_cols=246  Identities=13%  Similarity=0.083  Sum_probs=176.4

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc--hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP--LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|+++.+++.||+|++++...  ....+.+.+|++++++++||||++++++|++       ....+++|||+
T Consensus       195 ~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-------~~~l~lVmE~~  267 (543)
T 3c4z_A          195 RGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET-------KTDLCLVMTIM  267 (543)
T ss_dssp             ECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------SSEEEEEECCC
T ss_pred             eCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEee-------CCEEEEEEEec
Confidence            58999999999999999999999975221  1234678899999999999999999997753       34788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      +||+|.+++...... ...+++..++.++.||+.||+|||+  ++|+||||||+|||++.+|++||+|||+++.+.....
T Consensus       268 ~gg~L~~~l~~~~~~-~~~l~e~~~~~~~~qi~~aL~~LH~--~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~  344 (543)
T 3c4z_A          268 NGGDIRYHIYNVDED-NPGFQEPRAIFYTAQIVSGLEHLHQ--RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT  344 (543)
T ss_dssp             TTCBHHHHHHTSSTT-SCSCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred             cCCCHHHHHHHhhcc-cccccHHHHHHHHHHHHHHHHHHHH--cCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc
Confidence            999999999765420 1349999999999999999999999  8899999999999999999999999999998765443


Q ss_pred             -cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          163 -DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       163 -~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                       ..+.+||+.|+|||.+.+.++. ..|+|+.|...+.+.++.  .||.......          ........    ....
T Consensus       345 ~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~--~PF~~~~~~~----------~~~~~~~~----i~~~  408 (543)
T 3c4z_A          345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR--GPFRARGEKV----------ENKELKQR----VLEQ  408 (543)
T ss_dssp             CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS--CSSCCTTCCC----------CHHHHHHH----HHHC
T ss_pred             ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCC--CCCCCCccch----------hHHHHHHH----Hhhc
Confidence             3456899999999654432222 235666555555554443  3332221100          00001000    0000


Q ss_pred             hccccccCcCC---ccccccccccCCCCchH-----HHHhhcCcce
Q 019481          241 TITFLSALKIT---GCKSEEGYKNNSSLNPI-----CQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~~~~~p---~~~~~~~l~~dP~~R~t-----~~~ll~hp~~  278 (340)
                      ..  .-++.++   .++...||++||.+||+     ++++++|||+
T Consensus       409 ~~--~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff  452 (543)
T 3c4z_A          409 AV--TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLF  452 (543)
T ss_dssp             CC--CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGG
T ss_pred             cc--CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccc
Confidence            00  0011111   12344679999999995     5899999999

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=7.7e-39  Score=291.76  Aligned_cols=187  Identities=16%  Similarity=0.119  Sum_probs=142.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|++..+++.||+|++... ......+.+.+|++++++++||||++++++|...... .+....+++|||+
T Consensus        34 G~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~-~~~~~~~lv~e~~  112 (367)
T 1cm8_A           34 GSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETL-DDFTDFYLVMPFM  112 (367)
T ss_dssp             ------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSST-TTCCCCEEEEECC
T ss_pred             eecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcc-ccCceEEEEEecC
Confidence            3689999999999999999999999652 3344567789999999999999999999988654322 1223568999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                       +++|.++++.. .     +++..+..++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+|+.....  
T Consensus       113 -~~~L~~~~~~~-~-----l~~~~~~~~~~qi~~~L~~LH~--~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~--  181 (367)
T 1cm8_A          113 -GTDLGKLMKHE-K-----LGEDRIQFLVYQMLKGLRYIHA--AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE--  181 (367)
T ss_dssp             -SEEHHHHHHHC-C-----CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS--
T ss_pred             -CCCHHHHHhcC-C-----CCHHHHHHHHHHHHHHHHHHHH--CCccccCcCHHHEEEcCCCCEEEEeeecccccccc--
Confidence             78999999863 3     8999999999999999999999  77999999999999999999999999999876432  


Q ss_pred             cceeeccceeeccCccccc-hh-hhhHhHhCCcccccccccc
Q 019481          163 DLTALDTSSVSAQSGKTGM-EM-KMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~-~~-~~~~~~s~g~~~~~~~~~~  202 (340)
                      .....||+.|+||+...+. .+ ...|+|+.|...+.+.++.
T Consensus       182 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~  223 (367)
T 1cm8_A          182 MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK  223 (367)
T ss_dssp             CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCC
Confidence            3456788989998644331 11 1235666555555554443

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=3.1e-38  Score=281.91  Aligned_cols=255  Identities=15%  Similarity=0.077  Sum_probs=172.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|++..+++.||+|+++... ....+.+.+|+++++++ +||||++++++|..       ....+++|||+
T Consensus        22 g~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~-------~~~~~lv~e~~   93 (316)
T 2ac3_A           22 GEGAHARVQTCINLITSQEYAVKIIEKQP-GHIRSRVFREVEMLYQCQGHRNVLELIEFFEE-------EDRFYLVFEKM   93 (316)
T ss_dssp             CCCSSEEEEEEECSSSCCEEEEEEEECCS-SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-------TTEEEEEEECC
T ss_pred             cCCceEEEEEEEEcCCCcEEEEEEEeeCc-chhHHHHHHHHHHHHHhcCCCCeeeEEEEEee-------CCEEEEEEEcC
Confidence            46899999999999999999999997542 23456789999999995 79999999997753       34778999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCc---eEEeccccceeecc
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFK---CNLSDFSTAKVSAV  159 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~---~kl~DFGla~~~~~  159 (340)
                      ++|+|.+++.....     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++.   +||+|||+++....
T Consensus        94 ~~~~L~~~l~~~~~-----~~~~~~~~i~~qi~~~l~~lH~--~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~  166 (316)
T 2ac3_A           94 RGGSILSHIHKRRH-----FNELEASVVVQDVASALDFLHN--KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL  166 (316)
T ss_dssp             TTCBHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred             CCCcHHHHHhccCC-----CCHHHHHHHHHHHHHHHHHHHh--CCceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence            99999999988765     9999999999999999999999  88999999999999998776   99999999986543


Q ss_pred             cC--------CcceeeccceeeccCcccc------chhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchh
Q 019481          160 EN--------ADLTALDTSSVSAQSGKTG------MEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENET  225 (340)
Q Consensus       160 ~~--------~~~~~~gt~~~~~p~~~~~------~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  225 (340)
                      ..        .....+||+.|+|||.+.+      .--...|+|+.|...+.+.++.  .||..................
T Consensus       167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~--~pf~~~~~~~~~~~~~~~~~~  244 (316)
T 2ac3_A          167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGY--PPFVGRCGSDCGWDRGEACPA  244 (316)
T ss_dssp             ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSS--CSCCCCCCSCSCC----CCHH
T ss_pred             CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCC--CCCcccccccccccccccchh
Confidence            21        1223468888998864432      0111246777666666665544  333322211111111100010


Q ss_pred             HHHHHHHHHHHHhhhhcccccc--CcCC---ccccccccccCCCCchHHHHhhcCcce
Q 019481          226 WNNFLYLLLIATLLSTITFLSA--LKIT---GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~--~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .......   ........+...  ..++   .++...||+.||.+|||++++++|||+
T Consensus       245 ~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~  299 (316)
T 2ac3_A          245 CQNMLFE---SIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV  299 (316)
T ss_dssp             HHHHHHH---HHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTC
T ss_pred             HHHHHHH---HHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhh
Confidence            0110000   000000111000  1122   233457899999999999999999999

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=1.7e-39  Score=297.31  Aligned_cols=243  Identities=12%  Similarity=0.013  Sum_probs=163.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc--CchhhHHHHHHHH---HHhhhcCCCccccccccccccccccCCcc------
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI--TPLQLRRDDDGKL---DSLEEIFHPNQVKPSGYWSMNICLTGDRR------   73 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~~E~---~~l~~l~hpnIv~l~~~f~~~~~~~~~~~------   73 (340)
                      .|+||.||+|++..+++.||+|+++..  ......+.+.+|+   +++++++|||||++++.|........+.+      
T Consensus        83 ~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~  162 (377)
T 3byv_A           83 QEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIR  162 (377)
T ss_dssp             EETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEE
T ss_pred             cCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccc
Confidence            589999999999999999999999752  2234557789999   55566689999999955432211111111      


Q ss_pred             -----------eeeeeeccccCCCHHHHhcccCCC--ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEe
Q 019481           74 -----------YCWKNKWLMQKKGLENVHIGEHPA--SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILL  140 (340)
Q Consensus        74 -----------~~~~~~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl  140 (340)
                                 ..+++|||+ +|+|.+++......  ....+++..+..++.||+.||+|||+  ++|+||||||+|||+
T Consensus       163 ~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~--~~ivHrDikp~NIll  239 (377)
T 3byv_A          163 VRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH--YGLVHTYLRPVDIVL  239 (377)
T ss_dssp             C------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH--TTEECSCCCGGGEEE
T ss_pred             cccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEE
Confidence                       267999999 67999999875430  01124458888999999999999999  889999999999999


Q ss_pred             cCCCceEEeccccceeecccCCcceeeccceeeccCccccc-----------hh-hhhHhHhCCccccccccccccCCCC
Q 019481          141 DETFKCNLSDFSTAKVSAVENADLTALDTSSVSAQSGKTGM-----------EM-KMAQLESGGWRAHDEAEKAFQWPYK  208 (340)
Q Consensus       141 ~~~~~~kl~DFGla~~~~~~~~~~~~~gt~~~~~p~~~~~~-----------~~-~~~~~~s~g~~~~~~~~~~~~~~~~  208 (340)
                      +.++++||+|||+|+....  ...+.+| +.|+|||.+.+.           .+ ...|+|+.|...+.+.++.  .||.
T Consensus       240 ~~~~~~kL~DFG~a~~~~~--~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~--~Pf~  314 (377)
T 3byv_A          240 DQRGGVFLTGFEHLVRDGA--RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCAD--LPIT  314 (377)
T ss_dssp             CTTCCEEECCGGGCEETTC--EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSS--CCC-
T ss_pred             cCCCCEEEEechhheecCC--cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCC--CCCc
Confidence            9999999999999986433  3345567 778888654432           11 1235555555555444433  3322


Q ss_pred             CCcccccCCCccCCchhHHHHHHHHHHHHhhhhccccccCcCCc---cccccccccCCCCchHHHHhhcCccee
Q 019481          209 SSHLKNTRPNLKTENETWNNFLYLLLIATLLSTITFLSALKITG---CKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       209 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ..........+...                        .+.+|.   .+...||+.||.+|||++++++|||+.
T Consensus       315 ~~~~~~~~~~~~~~------------------------~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~  364 (377)
T 3byv_A          315 KDAALGGSEWIFRS------------------------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYE  364 (377)
T ss_dssp             -----CCSGGGGSS------------------------CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHH
T ss_pred             ccccccchhhhhhh------------------------ccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHH
Confidence            22111111111111                        111121   234478999999999999999999993

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.2e-38  Score=283.83  Aligned_cols=184  Identities=16%  Similarity=0.085  Sum_probs=143.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|++.... .....+.+.+|++++++++||||++++++|..       ....++++||++
T Consensus        13 ~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~~~~~lv~e~~~   85 (311)
T 4agu_A           13 EGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRR-------KRRLHLVFEYCD   85 (311)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------TTEEEEEEECCS
T ss_pred             ecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeec-------CCeEEEEEEeCC
Confidence            5899999999999999999999987533 33445678899999999999999999997753       346779999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-CC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-NA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~~  162 (340)
                      +++|.+++.....     +++..+..++.|+++||+|||+  ++|+||||||+||+++.++.+||+|||+++..... ..
T Consensus        86 ~~~l~~~~~~~~~-----~~~~~~~~i~~~l~~~l~~lH~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  158 (311)
T 4agu_A           86 HTVLHELDRYQRG-----VPEHLVKSITWQTLQAVNFCHK--HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY  158 (311)
T ss_dssp             EEHHHHHHHTSSC-----CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             CchHHHHHhhhcC-----CCHHHHHHHHHHHHHHHHHHHH--CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc
Confidence            9999999887665     9999999999999999999999  88999999999999999999999999999877643 22


Q ss_pred             cceeeccceeeccCccccch--hhhhHhHhCCcccccccccc
Q 019481          163 DLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~  202 (340)
                      .....||+.|++|+.+.+..  -...|+|+.|...+.+.++.
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~  200 (311)
T 4agu_A          159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGV  200 (311)
T ss_dssp             -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCC
Confidence            34557888899986543311  12346666666666655544

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=7.2e-38  Score=274.03  Aligned_cols=243  Identities=14%  Similarity=0.073  Sum_probs=182.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|+++........+.+.+|+++++.++||||+++++++..       ....++++||+++
T Consensus        17 ~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~~lv~e~~~~   89 (276)
T 2yex_A           17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-------GNIQYLFLEYCSG   89 (276)
T ss_dssp             ECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-------TTEEEEEEECCTT
T ss_pred             cCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEc-------CCEEEEEEEecCC
Confidence            589999999999999999999999864444556778999999999999999999997653       3467899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC---
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN---  161 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~---  161 (340)
                      |+|.+++.....     +++..+..++.|+++||+|||+  ++|+||||||+||+++.++++||+|||++.......   
T Consensus        90 ~~L~~~l~~~~~-----~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~  162 (276)
T 2yex_A           90 GELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER  162 (276)
T ss_dssp             EEGGGGSBTTTB-----CCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred             CcHHHHHhhccC-----CCHHHHHHHHHHHHHHHHHHHh--CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchh
Confidence            999999987655     9999999999999999999999  889999999999999999999999999998765432   


Q ss_pred             CcceeeccceeeccCccccchh--hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      ......||+.|++|+...+.+.  ...|+|+.|...+.+.++.  .||.......         ..+.   ..   ... 
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~--~p~~~~~~~~---------~~~~---~~---~~~-  224 (276)
T 2yex_A          163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSC---------QEYS---DW---KEK-  224 (276)
T ss_dssp             CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSS--CCCSCSCTTS---------HHHH---HH---HTT-
T ss_pred             cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCC--CCCCCCchHH---------HHHH---Hh---hhc-
Confidence            2345678999999987665443  2458888777777766554  3332221100         0000   00   000 


Q ss_pred             hhccccccCcCC---ccccccccccCCCCchHHHHhhcCcceee
Q 019481          240 STITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       240 ~~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                       .........++   ..+...||+.||++|||++++++|||+..
T Consensus       225 -~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~  267 (276)
T 2yex_A          225 -KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK  267 (276)
T ss_dssp             -CTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             -ccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccC
Confidence             00000001111   12344789999999999999999999943

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=8.9e-39  Score=280.92  Aligned_cols=238  Identities=16%  Similarity=0.121  Sum_probs=170.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCch-----hhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPL-----QLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~-----~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      .|+||.||+|++..+++.||+|+++.....     ...+.+.+|++++++++||||+++++++.       +....++++
T Consensus        15 ~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~   87 (283)
T 3bhy_A           15 SGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFE-------NKTDVVLIL   87 (283)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE-------CSSEEEEEE
T ss_pred             ccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheec-------CCCeEEEEE
Confidence            589999999999999999999999753211     13577899999999999999999999765       344778999


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC----ceEEeccccce
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF----KCNLSDFSTAK  155 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~----~~kl~DFGla~  155 (340)
                      ||+++++|.+++.....     +++..+..++.||+.||+|||+  ++|+||||||+||+++.++    ++||+|||+++
T Consensus        88 e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~  160 (283)
T 3bhy_A           88 ELVSGGELFDFLAEKES-----LTEDEATQFLKQILDGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH  160 (283)
T ss_dssp             ECCCSCBHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             eecCCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence            99999999999987655     9999999999999999999999  7899999999999998877    89999999998


Q ss_pred             eecccCCcceeeccceeeccCccccchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHH
Q 019481          156 VSAVENADLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLL  234 (340)
Q Consensus       156 ~~~~~~~~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (340)
                      ............||+.|++|+...+..+ ...|+|+.|...+.+.++.  .||...........+               
T Consensus       161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~--~p~~~~~~~~~~~~~---------------  223 (283)
T 3bhy_A          161 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA--SPFLGETKQETLTNI---------------  223 (283)
T ss_dssp             ECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS--CTTCCSSHHHHHHHH---------------
T ss_pred             eccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCC--CCCCCcchHHHHHHh---------------
Confidence            8766555556678888988864332111 1235555555555444433  222221110000000               


Q ss_pred             HHHhhhhcccccc----CcCC---ccccccccccCCCCchHHHHhhcCcce
Q 019481          235 IATLLSTITFLSA----LKIT---GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       235 ~~~~~~~~~~~~~----~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                           ........    +..+   ..+...||+.||++|||++++++|||+
T Consensus       224 -----~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~  269 (283)
T 3bhy_A          224 -----SAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWI  269 (283)
T ss_dssp             -----HTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHH
T ss_pred             -----HhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHH
Confidence                 00000000    1111   223457899999999999999999999

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=6.9e-39  Score=287.96  Aligned_cols=183  Identities=14%  Similarity=0.069  Sum_probs=137.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc-hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP-LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|+++.... ....+.+.+|++++++++||||++++++|..       ....+++|||++
T Consensus        44 ~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~~~lv~e~~~  116 (329)
T 3gbz_A           44 EGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHH-------NHRLHLIFEYAE  116 (329)
T ss_dssp             ECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEE-------TTEEEEEEECCS
T ss_pred             ecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEec-------CCEEEEEEecCC
Confidence            58999999999999999999999975332 2334567899999999999999999997753       346789999997


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEec-----CCCceEEeccccceeec
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLD-----ETFKCNLSDFSTAKVSA  158 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~-----~~~~~kl~DFGla~~~~  158 (340)
                       |+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++     .++.+||+|||+|+...
T Consensus       117 -~~L~~~~~~~~~-----~~~~~~~~i~~ql~~~l~~LH~--~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~  188 (329)
T 3gbz_A          117 -NDLKKYMDKNPD-----VSMRVIKSFLYQLINGVNFCHS--RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG  188 (329)
T ss_dssp             -EEHHHHHHHCTT-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred             -CCHHHHHhhcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence             599999988766     9999999999999999999999  8899999999999994     45569999999998765


Q ss_pred             cc-CCcceeeccceeeccCccccch--hhhhHhHhCCcccccccccc
Q 019481          159 VE-NADLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       159 ~~-~~~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~  202 (340)
                      .. ......+||+.|+|||.+.+..  -...|+|+.|...+.+.++.
T Consensus       189 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~  235 (329)
T 3gbz_A          189 IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKT  235 (329)
T ss_dssp             -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence            32 2334457788899986554322  12346666666665554443

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=9.1e-38  Score=280.40  Aligned_cols=240  Identities=12%  Similarity=0.081  Sum_probs=169.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|+++... .......+.+|+.++++++ ||||++++++|.       +....+++|||+
T Consensus        39 ~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~-------~~~~~~lv~e~~  111 (327)
T 3lm5_A           39 RGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE-------NTSEIILILEYA  111 (327)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE-------CSSEEEEEEECC
T ss_pred             CCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE-------eCCeEEEEEEec
Confidence            5899999999999999999999998632 2334567899999999995 699999999765       444678999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC---CCceEEeccccceeecc
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE---TFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~---~~~~kl~DFGla~~~~~  159 (340)
                      ++|+|.+++.....   ..+++..++.++.||+.||+|||+  ++|+||||||+|||++.   ++.+||+|||+++....
T Consensus       112 ~~~~L~~~~~~~~~---~~~~~~~~~~i~~ql~~~L~~LH~--~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~  186 (327)
T 3lm5_A          112 AGGEIFSLCLPELA---EMVSENDVIRLIKQILEGVYYLHQ--NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH  186 (327)
T ss_dssp             TTEEGGGGGSSCC----CCCCHHHHHHHHHHHHHHHHHHHH--TTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC--
T ss_pred             CCCcHHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHH--CCeecCcCChHHEEEecCCCCCcEEEeeCccccccCC
Confidence            99999999976533   359999999999999999999999  88999999999999988   78999999999998876


Q ss_pred             cCCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHh
Q 019481          160 ENADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATL  238 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (340)
                      ........||+.|++|+.+.+..+. ..|+|+.|...+.+.++.  .||......              ..  .   . .
T Consensus       187 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~--~pf~~~~~~--------------~~--~---~-~  244 (327)
T 3lm5_A          187 ACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHT--SPFVGEDNQ--------------ET--Y---L-N  244 (327)
T ss_dssp             -------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS--CSSCCSSHH--------------HH--H---H-H
T ss_pred             ccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCC--CCCCCCCch--------------HH--H---H-H
Confidence            6555667899999998644322221 235555555554444433  222111110              00  0   0 0


Q ss_pred             hhhcccccc----CcCCc---cccccccccCCCCchHHHHhhcCcce
Q 019481          239 LSTITFLSA----LKITG---CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       239 ~~~~~~~~~----~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .........    +..+.   .+...||+.||.+|||++++++|||+
T Consensus       245 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~  291 (327)
T 3lm5_A          245 ISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWL  291 (327)
T ss_dssp             HHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGG
T ss_pred             HHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhh
Confidence            001111111    11111   23447899999999999999999999

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=6.2e-38  Score=285.61  Aligned_cols=263  Identities=13%  Similarity=0.105  Sum_probs=180.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|++.........+.+.+|++++++++||||+++++++....  ..+....++++||+. 
T Consensus        37 ~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~~~~~~iv~e~~~-  113 (364)
T 3qyz_A           37 EGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT--IEQMKDVYIVQDLME-  113 (364)
T ss_dssp             ECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSS--TTTCCCEEEEEECCS-
T ss_pred             cCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCC--ccccceEEEEEcccC-
Confidence            58999999999999999999999986555555678899999999999999999999876432  123346789999997 


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC--
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA--  162 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~--  162 (340)
                      |+|.+++....      +++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.......  
T Consensus       114 ~~L~~~l~~~~------~~~~~~~~i~~qi~~aL~~LH~--~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~  185 (364)
T 3qyz_A          114 TDLYKLLKTQH------LSNDHICYFLYQILRGLKYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT  185 (364)
T ss_dssp             EEHHHHHHHCC------CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBC
T ss_pred             cCHHHHHHhCC------CCHHHHHHHHHHHHHHHHHHHH--CCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCcc
Confidence            59999997642      8999999999999999999999  8899999999999999999999999999987765332  


Q ss_pred             --cceeeccceeeccCccccch--hhhhHhHhCCccccccccccccCCCCCCcccccCCCccC--CchhHHHHHHHH--H
Q 019481          163 --DLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKT--ENETWNNFLYLL--L  234 (340)
Q Consensus       163 --~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~--~  234 (340)
                        ....+||+.|+||+.+.+..  -...|+|+.|...+.+.++.  .||...........+..  +.++........  .
T Consensus       186 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~--~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  263 (364)
T 3qyz_A          186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR--PIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK  263 (364)
T ss_dssp             CTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSS--CSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHH
T ss_pred             ccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCC--CCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhh
Confidence              23457899999997443211  12346777666666665544  33333222111111110  111100000000  0


Q ss_pred             HHHhhhhcccccc-------CcCC---ccccccccccCCCCchHHHHhhcCcceee
Q 019481          235 IATLLSTITFLSA-------LKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       235 ~~~~~~~~~~~~~-------~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                      .............       +..+   .++...||+.||.+|||++++++|||+..
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  319 (364)
T 3qyz_A          264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ  319 (364)
T ss_dssp             HHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTT
T ss_pred             HHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhh
Confidence            0000000000000       1111   12344789999999999999999999943

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=3.5e-39  Score=289.23  Aligned_cols=184  Identities=15%  Similarity=0.080  Sum_probs=139.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|+++..........+.+|++++++++||||++++++|.       +....+++|||++ 
T Consensus        12 ~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------~~~~~~lv~e~~~-   83 (324)
T 3mtl_A           12 EGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH-------TEKSLTLVFEYLD-   83 (324)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEE-------CSSCEEEEEECCS-
T ss_pred             CCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEe-------eCCEEEEEecccc-
Confidence            58999999999999999999999975433333335668999999999999999999765       3446789999997 


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-Cc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-AD  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~~  163 (340)
                      |+|.+++.....    .+++..++.++.||+.||+|||+  ++|+||||||+|||++.++++||+|||+++...... ..
T Consensus        84 ~~l~~~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~--~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~  157 (324)
T 3mtl_A           84 KDLKQYLDDCGN----IINMHNVKLFLFQLLRGLAYCHR--QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY  157 (324)
T ss_dssp             EEHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHH--TTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred             cCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHH--CCccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc
Confidence            599999887654    49999999999999999999999  889999999999999999999999999998665432 23


Q ss_pred             ceeeccceeeccCccccch--hhhhHhHhCCcccccccccc
Q 019481          164 LTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~  202 (340)
                      ....||+.|+||+.+.+..  -...|+|+.|...+.+.++.
T Consensus       158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~  198 (324)
T 3mtl_A          158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR  198 (324)
T ss_dssp             -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            3457888899997544311  11346677666666655544

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=2.4e-38  Score=287.76  Aligned_cols=180  Identities=16%  Similarity=0.113  Sum_probs=143.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-----CCccccccccccccccccCCcceeeeee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-----HPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-----hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      .|+||.||+|++..+++.||+|+++.  .....+...+|+++++.++     ||||++++++|..       ....+++|
T Consensus        45 ~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~-------~~~~~lv~  115 (360)
T 3llt_A           45 DGTFGRVLLCQHIDNKKYYAVKVVRN--IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY-------YDHMCLIF  115 (360)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEECS--CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEE-------TTEEEEEE
T ss_pred             ccCCeEEEEEEECCCCeEEEEEEecc--chhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeE-------CCeeEEEE
Confidence            58999999999999999999999963  3345566788999999997     9999999997753       33678999


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC-----------------
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE-----------------  142 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~-----------------  142 (340)
                      ||+ +++|.+++.....   ..+++..++.++.||+.||+|||+  ++|+||||||+|||++.                 
T Consensus       116 e~~-~~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~--~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~  189 (360)
T 3llt_A          116 EPL-GPSLYEIITRNNY---NGFHIEDIKLYCIEILKALNYLRK--MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGK  189 (360)
T ss_dssp             CCC-CCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEESCTTCCEEEEEEECTTTCC
T ss_pred             cCC-CCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeeCCCCcccEEEccccccccccchhcccccc
Confidence            999 8999999987654   359999999999999999999999  78999999999999975                 


Q ss_pred             --------CCceEEeccccceeecccCCcceeeccceeeccCccccchhh-hhHhHhCCccccccccc
Q 019481          143 --------TFKCNLSDFSTAKVSAVENADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEK  201 (340)
Q Consensus       143 --------~~~~kl~DFGla~~~~~~~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~  201 (340)
                              ++.+||+|||+|+....  ......||+.|+|||.+.+..+. ..|+|+.|...+.+.++
T Consensus       190 ~~~~~~~~~~~~kl~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g  255 (360)
T 3llt_A          190 KIQIYRTKSTGIKLIDFGCATFKSD--YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG  255 (360)
T ss_dssp             EEEEEEESCCCEEECCCTTCEETTS--CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHS
T ss_pred             cccccccCCCCEEEEeccCceecCC--CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHC
Confidence                    78999999999986543  23456789999999644332221 23555555555444443

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=4.4e-39  Score=282.44  Aligned_cols=237  Identities=17%  Similarity=0.138  Sum_probs=168.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|++....  .....+.+.+|++++++++||||++++++|.       +....+++|||+
T Consensus        19 ~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~~   91 (279)
T 3fdn_A           19 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH-------DATRVYLILEYA   91 (279)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEE-------CSSEEEEEECCC
T ss_pred             cCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEe-------cCCEEEEEEecC
Confidence            5899999999999999999999997422  1223566889999999999999999999765       344678999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      ++|+|.+.+.....     +++..+..++.||+.||+|||+  ++|+||||||+||+++.++++||+|||++...... .
T Consensus        92 ~~~~l~~~l~~~~~-----~~~~~~~~~~~qi~~~l~~LH~--~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~-~  163 (279)
T 3fdn_A           92 PLGTVYRELQKLSK-----FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-R  163 (279)
T ss_dssp             TTEEHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHT--TTCEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred             CCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCEecccCChHhEEEcCCCCEEEEeccccccCCcc-c
Confidence            99999999988765     9999999999999999999999  88999999999999999999999999998655433 2


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      .....||+.|++|+.+.+.... ..|+|+.|...+.+.++.  .||.....              .....      ....
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~--~p~~~~~~--------------~~~~~------~~~~  221 (279)
T 3fdn_A          164 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTY--------------QETYK------RISR  221 (279)
T ss_dssp             ----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSS--CTTCCSSH--------------HHHHH------HHHH
T ss_pred             ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCC--CCCCCCcH--------------HHHHH------HHHh
Confidence            3455788888888643322211 235555555554443333  22211111              00000      0011


Q ss_pred             ccccccCcCCc---cccccccccCCCCchHHHHhhcCcce
Q 019481          242 ITFLSALKITG---CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       242 ~~~~~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .....+...+.   .+...||+.||.+|||++++++|||+
T Consensus       222 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~  261 (279)
T 3fdn_A          222 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI  261 (279)
T ss_dssp             TCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHH
T ss_pred             CCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccc
Confidence            11111111111   23447899999999999999999999

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=9.3e-39  Score=279.76  Aligned_cols=238  Identities=13%  Similarity=0.125  Sum_probs=171.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|+++...  .....+.+.+|++++++++||||+++++++.       +....++++||+
T Consensus        21 ~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~~   93 (276)
T 2h6d_A           21 VGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIS-------TPTDFFMVMEYV   93 (276)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE-------CSSEEEEEEECC
T ss_pred             CCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEe-------cCCeEEEEEecc
Confidence            5899999999999999999999997422  1223467889999999999999999999765       344778999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      ++++|.+++.....     +++..+..++.||+.||+|||+  ++|+||||||+||+++.++++||+|||+++.......
T Consensus        94 ~~~~L~~~l~~~~~-----~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~  166 (276)
T 2h6d_A           94 SGGELFDYICKHGR-----VEEMEARRLFQQILSAVDYCHR--HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF  166 (276)
T ss_dssp             CSCBHHHHHHHHCS-----CCHHHHHHHHHHHHHHHHHHHH--HCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred             CCCcHHHHHhccCC-----CCHHHHHHHHHHHHHHHHHHHH--CCCccCCCChhhEEECCCCCEEEeecccccccCCCcc
Confidence            99999999987765     9999999999999999999999  7899999999999999999999999999988766555


Q ss_pred             cceeeccceeeccCccccchh--hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      .....||+.|++|+...+...  ...|+|+.|...+.+.++.  .||.....              ......      +.
T Consensus       167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~--~p~~~~~~--------------~~~~~~------~~  224 (276)
T 2h6d_A          167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGT--LPFDDEHV--------------PTLFKK------IR  224 (276)
T ss_dssp             ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSS--CSSCCSSH--------------HHHHHH------HH
T ss_pred             eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCC--CCCCCCcH--------------HHHHHH------hh
Confidence            556678999999987665432  3457787777776665544  33322111              000000      00


Q ss_pred             hccccccCcCCc---cccccccccCCCCchHHHHhhcCcce
Q 019481          241 TITFLSALKITG---CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ......+...+.   .+...||+.||.+|||++++++|||+
T Consensus       225 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~  265 (276)
T 2h6d_A          225 GGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWF  265 (276)
T ss_dssp             HCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHH
T ss_pred             cCcccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhChhh
Confidence            000000111111   23447899999999999999999999

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=2.1e-38  Score=280.13  Aligned_cols=238  Identities=16%  Similarity=0.188  Sum_probs=174.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc--CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI--TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|++...  ......+.+.+|++++++++||||+++++++.       +....++++||+
T Consensus        25 ~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-------~~~~~~lv~e~~   97 (294)
T 2rku_A           25 KGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE-------DNDFVFVVLELC   97 (294)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-------CSSEEEEEEECC
T ss_pred             ecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeec-------cCCEEEEEEecC
Confidence            589999999999999999999999753  23345677899999999999999999999765       344788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-C
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-N  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~  161 (340)
                      ++++|.+++.....     +++..+..++.|+++||+|||+  ++|+||||||+||+++.++++||+|||+++..... .
T Consensus        98 ~~~~L~~~~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~--~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~  170 (294)
T 2rku_A           98 RRRSLLELHKRRKA-----LTEPEARYYLRQIVLGCQYLHR--NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE  170 (294)
T ss_dssp             TTCBHHHHHHHHCS-----CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred             CCCCHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence            99999999987665     9999999999999999999999  88999999999999999999999999999876543 2


Q ss_pred             CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      ......||+.|++|+...+.... ..|+|+.|...+.+.++.  .||......              ..  .   . ...
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~--~p~~~~~~~--------------~~--~---~-~~~  228 (294)
T 2rku_A          171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK--PPFETSCLK--------------ET--Y---L-RIK  228 (294)
T ss_dssp             CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSS--CTTCCSSHH--------------HH--H---H-HHH
T ss_pred             ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCC--CCCCCCCHH--------------HH--H---H-HHh
Confidence            33445688888888644332221 335665555555444433  332221110              00  0   0 000


Q ss_pred             hccccccCcCC---ccccccccccCCCCchHHHHhhcCcce
Q 019481          241 TITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ......+...+   ..+...|++.||++|||++++++|||+
T Consensus       229 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~  269 (294)
T 2rku_A          229 KNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF  269 (294)
T ss_dssp             TTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHH
T ss_pred             hccCCCccccCHHHHHHHHHHcccChhhCcCHHHHhhChhe
Confidence            00011111111   122347899999999999999999999

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=2.1e-38  Score=285.50  Aligned_cols=239  Identities=15%  Similarity=0.185  Sum_probs=175.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc--CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI--TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|++...  ......+.+.+|++++++++||||++++++|.       +....+++|||+
T Consensus        51 ~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------~~~~~~lv~e~~  123 (335)
T 2owb_A           51 KGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE-------DNDFVFVVLELC  123 (335)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-------CSSEEEEEECCC
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-------cCCeEEEEEecC
Confidence            589999999999999999999999753  23345677899999999999999999999765       344788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-C
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-N  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~  161 (340)
                      ++++|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++..... .
T Consensus       124 ~~~~L~~~~~~~~~-----l~~~~~~~i~~qi~~aL~~LH~--~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~  196 (335)
T 2owb_A          124 RRRSLLELHKRRKA-----LTEPEARYYLRQIVLGCQYLHR--NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE  196 (335)
T ss_dssp             TTCBHHHHHHHHCS-----CCHHHHHHHHHHHHHHHHHHHH--TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred             CCCCHHHHHhccCC-----CCHHHHHHHHHHHHHHHHHHHH--CCCEecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence            99999999987665     9999999999999999999999  88999999999999999999999999999877543 3


Q ss_pred             CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      ......||+.|++|+.+.+.... ..|+|+.|...+.+.++.  .||.....              .....      ...
T Consensus       197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~--~pf~~~~~--------------~~~~~------~~~  254 (335)
T 2owb_A          197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK--PPFETSCL--------------KETYL------RIK  254 (335)
T ss_dssp             CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSS--CTTCCSSH--------------HHHHH------HHH
T ss_pred             cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCc--CCCCCCCH--------------HHHHH------HHh
Confidence            33456788888888543322211 235555555554444333  22221111              00000      000


Q ss_pred             hccccccCcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          241 TITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       241 ~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ..........+   ..+...||+.||.+|||++++++|||+.
T Consensus       255 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~  296 (335)
T 2owb_A          255 KNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFT  296 (335)
T ss_dssp             HTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHH
T ss_pred             cCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccc
Confidence            00111111111   1234478999999999999999999993

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=2.7e-38  Score=286.57  Aligned_cols=192  Identities=14%  Similarity=0.096  Sum_probs=146.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCcccccccccccccccc-CCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLT-GDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~-~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|++..+++.||+|++.... .......+.+|++++++++||||+++++++......+ ...+..+++|||
T Consensus        26 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~  105 (351)
T 3mi9_A           26 GQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDF  105 (351)
T ss_dssp             SSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEEEEC
T ss_pred             ecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEEEec
Confidence            36899999999999999999999987532 2233456789999999999999999999886543211 124467899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-  160 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-  160 (340)
                      +++ +|.+.+.....    .+++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+|+.+... 
T Consensus       106 ~~~-~l~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~LH~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~  178 (351)
T 3mi9_A          106 CEH-DLAGLLSNVLV----KFTLSEIKRVMQMLLNGLYYIHR--NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAK  178 (351)
T ss_dssp             CSE-EHHHHHHCTTS----CCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCS
T ss_pred             cCC-CHHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHH--CCeeCCCCCHHHEEEcCCCCEEEccchhcccccccc
Confidence            975 88888776644    39999999999999999999999  88999999999999999999999999999876532 


Q ss_pred             ----CCcceeeccceeeccCccccch--hhhhHhHhCCcccccccccc
Q 019481          161 ----NADLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       161 ----~~~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~  202 (340)
                          .......||+.|+|||.+.+..  -...|+|+.|...+.+.++.
T Consensus       179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~  226 (351)
T 3mi9_A          179 NSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRS  226 (351)
T ss_dssp             SSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             cccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCC
Confidence                2223457889899997544321  12346666666665554433

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=3.4e-38  Score=285.45  Aligned_cols=238  Identities=18%  Similarity=0.158  Sum_probs=169.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc--CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI--TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|++...  ......+.+.+|++++++++||||++++++|..       ....+++|||+
T Consensus        64 ~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------~~~~~lv~e~~  136 (348)
T 1u5q_A           64 HGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-------EHTAWLVMEYC  136 (348)
T ss_dssp             ECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------TTEEEEEEECC
T ss_pred             cCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-------CCeEEEEEecC
Confidence            589999999999999999999999753  233445678999999999999999999997753       34778999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      + |+|.+++.....    .+++..+..++.|+++||+|||+  ++|+||||||+|||++.++.+||+|||+++.....  
T Consensus       137 ~-g~l~~~l~~~~~----~l~~~~~~~i~~qi~~aL~~LH~--~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~--  207 (348)
T 1u5q_A          137 L-GSASDLLEVHKK----PLQEVEIAAVTHGALQGLAYLHS--HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--  207 (348)
T ss_dssp             S-EEHHHHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHH--TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred             C-CCHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHh--CCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence            7 688888865443    39999999999999999999999  78999999999999999999999999999876442  


Q ss_pred             cceeeccceeeccCcccc----chhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHh
Q 019481          163 DLTALDTSSVSAQSGKTG----MEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATL  238 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~----~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (340)
                       ...+||+.|+|||.+.+    .--...|+|+.|...+.+                     .++..||............
T Consensus       208 -~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~el---------------------l~g~~p~~~~~~~~~~~~~  265 (348)
T 1u5q_A          208 -NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL---------------------AERKPPLFNMNAMSALYHI  265 (348)
T ss_dssp             -CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHH---------------------HHSSCTTTTSCHHHHHHHH
T ss_pred             -CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHH---------------------HhCCCCCCCCChHHHHHHH
Confidence             35678888888854321    001123455544444443                     3333333221111000000


Q ss_pred             hhh-ccccccCcCCc---cccccccccCCCCchHHHHhhcCcceee
Q 019481          239 LST-ITFLSALKITG---CKSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       239 ~~~-~~~~~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                      ... .........+.   .+...||+.||.+|||++++++|||+.+
T Consensus       266 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~  311 (348)
T 1u5q_A          266 AQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR  311 (348)
T ss_dssp             HHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred             HhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhc
Confidence            000 00000011111   2344789999999999999999999943

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=1.2e-38  Score=289.95  Aligned_cols=183  Identities=19%  Similarity=0.110  Sum_probs=149.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|++.........+.+.+|++++++++||||++++++|..       ....+++|||+++
T Consensus        43 ~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~~~lv~e~~~~  115 (360)
T 3eqc_A           43 AGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-------DGEISICMEHMDG  115 (360)
T ss_dssp             ECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE-------TTEEEEEECCCTT
T ss_pred             CCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE-------CCEEEEEEECCCC
Confidence            589999999999999999999999876556667789999999999999999999997753       3367899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCC-ceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEK-QVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~-~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      |+|.+++.....     +++..+..++.|++.||+|||+  + +|+||||||+|||++.++++||+|||+++..... ..
T Consensus       116 ~~L~~~l~~~~~-----~~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~  187 (360)
T 3eqc_A          116 GSLDQVLKKAGR-----IPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-MA  187 (360)
T ss_dssp             CBHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHH--HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH-C-
T ss_pred             CCHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--hCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc-cc
Confidence            999999988765     9999999999999999999998  5 6999999999999999999999999999765433 23


Q ss_pred             ceeeccceeeccCccccchhh-hhHhHhCCcccccccccc
Q 019481          164 LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~  202 (340)
                      ....||+.|++|+.+.+..+. ..|+|+.|...+.+.++.
T Consensus       188 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  227 (360)
T 3eqc_A          188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR  227 (360)
T ss_dssp             ---CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTS
T ss_pred             cCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCC
Confidence            456789999999654433222 236666666666555544

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=2.3e-37  Score=275.64  Aligned_cols=237  Identities=16%  Similarity=0.118  Sum_probs=171.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|.+... .....+.+.+|++++++++||||+++++++..       ....+++|||+++
T Consensus        20 ~G~~g~V~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~~~~lv~e~~~~   91 (310)
T 3s95_A           20 KGCFGQAIKVTHRETGEVMVMKELIRF-DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK-------DKRLNFITEYIKG   91 (310)
T ss_dssp             CCSSEEEEEEEETTTCCEEEEEEESCC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-------TTEEEEEEECCTT
T ss_pred             CCCCEEEEEEEECCCCcEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCcCcccEEEEEec-------CCeeEEEEEecCC
Confidence            689999999999999999999998643 34566789999999999999999999997753       3467799999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc-
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD-  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~-  163 (340)
                      |+|.+++.....    .+++..+..++.|+++||+|||+  ++|+||||||+|||++.++++||+|||+++........ 
T Consensus        92 ~~L~~~l~~~~~----~~~~~~~~~i~~qi~~al~~lH~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  165 (310)
T 3s95_A           92 GTLRGIIKSMDS----QYPWSQRVSFAKDIASGMAYLHS--MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP  165 (310)
T ss_dssp             CBHHHHHHHCCT----TSCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred             CcHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHh--CCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence            999999987543    39999999999999999999999  88999999999999999999999999999876543221 


Q ss_pred             --------------ceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHH
Q 019481          164 --------------LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNN  228 (340)
Q Consensus       164 --------------~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (340)
                                    .+.+||+.|+|||.+.+..+. ..|+|+.|...+.+.+....++......  ......     ...
T Consensus       166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~--~~~~~~-----~~~  238 (310)
T 3s95_A          166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRT--MDFGLN-----VRG  238 (310)
T ss_dssp             --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBC--TTSSBC-----HHH
T ss_pred             cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhH--HHHhhh-----hhc
Confidence                          145789999999754432222 3466666666665544442232111111  000000     000


Q ss_pred             HHHHHHHHHhhhhccccccCcCCc---cccccccccCCCCchHHHHhhc
Q 019481          229 FLYLLLIATLLSTITFLSALKITG---CKSEEGYKNNSSLNPICQIVNQ  274 (340)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~  274 (340)
                      ...            ....+..|.   .+...|++.||++|||++++++
T Consensus       239 ~~~------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          239 FLD------------RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             HHH------------HTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccc------------ccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            000            000122222   2344789999999999999876

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=8.1e-39  Score=286.58  Aligned_cols=242  Identities=14%  Similarity=0.097  Sum_probs=172.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc-------hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP-------LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWK   77 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-------~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~   77 (340)
                      .|+||.||+|++..+++.||+|++.....       ......+.+|++++++++||||++++++|...        ..++
T Consensus        20 ~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--------~~~l   91 (322)
T 2ycf_A           20 SGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE--------DYYI   91 (322)
T ss_dssp             ECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS--------SEEE
T ss_pred             cCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC--------ceEE
Confidence            58999999999999999999999974221       12234588999999999999999999976432        3679


Q ss_pred             eeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCc---eEEeccccc
Q 019481           78 NKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFK---CNLSDFSTA  154 (340)
Q Consensus        78 ~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~---~kl~DFGla  154 (340)
                      ++||+++|+|.+++.....     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++.   +||+|||++
T Consensus        92 v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~  164 (322)
T 2ycf_A           92 VLELMEGGELFDKVVGNKR-----LKEATCKLYFYQMLLAVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHS  164 (322)
T ss_dssp             EEECCTTEETHHHHSTTCC-----CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred             EEecCCCCcHHHHHhccCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence            9999999999999987665     9999999999999999999999  88999999999999987665   999999999


Q ss_pred             eeecccCCcceeeccceeeccCcccc---ch-hhhhHhHhCCccccccccccccCCCCCCcccc-cCCCccCCchhHHHH
Q 019481          155 KVSAVENADLTALDTSSVSAQSGKTG---ME-MKMAQLESGGWRAHDEAEKAFQWPYKSSHLKN-TRPNLKTENETWNNF  229 (340)
Q Consensus       155 ~~~~~~~~~~~~~gt~~~~~p~~~~~---~~-~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~  229 (340)
                      +............||+.|++|+.+.+   .. -...|+|+.|...+.+.++.  .||....... +...+..+...+.. 
T Consensus       165 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~--~pf~~~~~~~~~~~~~~~~~~~~~~-  241 (322)
T 2ycf_A          165 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY--PPFSEHRTQVSLKDQITSGKYNFIP-  241 (322)
T ss_dssp             EECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSS--CSSCSTTCSSCHHHHHHHTCCCCCH-
T ss_pred             eecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCC--CCCcccchHHHHHHHHHhCccccCc-
Confidence            88765444445678888998865421   11 12357777777776665554  3332211110 00000000000000 


Q ss_pred             HHHHHHHHhhhhccccccCcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          230 LYLLLIATLLSTITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                                     ......+   ..+...||+.||.+|||++++++|||+.
T Consensus       242 ---------------~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~  279 (322)
T 2ycf_A          242 ---------------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ  279 (322)
T ss_dssp             ---------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGC
T ss_pred             ---------------hhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcC
Confidence                           0001111   1234478999999999999999999993

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=8e-38  Score=286.79  Aligned_cols=189  Identities=19%  Similarity=0.119  Sum_probs=145.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccc----------------
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICL----------------   68 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~----------------   68 (340)
                      .|+||.||+|++..+++.||+|++....     ....+|+++++.++||||++++++|......                
T Consensus        17 ~G~fg~V~~a~~~~~~~~vAiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (383)
T 3eb0_A           17 TGSFGIVCEVFDIESGKRFALKKVLQDP-----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGG   91 (383)
T ss_dssp             CC-CEEEEEEEETTTCCEEEEEEEECCT-----TSCCHHHHHHTTCCCTTBCCEEEEEEEC-------------------
T ss_pred             eccCEEEEEEEECCCCCEEEEEEEecCc-----chHHHHHHHHHHcCCCCccchhheeeecCcccccccccccccccccc
Confidence            6999999999999999999999986422     2234799999999999999999988653221                


Q ss_pred             ---------------cCCcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCC
Q 019481           69 ---------------TGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDF  133 (340)
Q Consensus        69 ---------------~~~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDl  133 (340)
                                     ..+..+.+++|||++ |+|.+.+..... .+..+++..++.++.||++||+|||+  ++|+||||
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~--~gi~H~Di  167 (383)
T 3eb0_A           92 KNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIR-SGRSIPMNLISIYIYQLFRAVGFIHS--LGICHRDI  167 (383)
T ss_dssp             ------------------CCEEEEEECCCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHT--TTEECSCC
T ss_pred             cccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHH--CcCccCcc
Confidence                           034557889999998 587777764210 01249999999999999999999999  78999999


Q ss_pred             CCCcEEec-CCCceEEeccccceeecccCCcceeeccceeeccCccccch--hhhhHhHhCCcccccccccc
Q 019481          134 KAPNILLD-ETFKCNLSDFSTAKVSAVENADLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       134 Kp~NILl~-~~~~~kl~DFGla~~~~~~~~~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~  202 (340)
                      ||+|||++ .++.+||+|||+|+............||+.|+||+.+.+..  -...|+|+.|...+.+.++.
T Consensus       168 kp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~  239 (383)
T 3eb0_A          168 KPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGK  239 (383)
T ss_dssp             CGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCC
Confidence            99999998 58999999999999887777777788899999997554322  12346676666666555444

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=6.5e-39  Score=289.76  Aligned_cols=245  Identities=16%  Similarity=0.072  Sum_probs=169.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC----chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT----PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|+||.||+|++..+++.||+|++....    .....+.+.+|++++++++||||++++++|.       +....+++||
T Consensus        36 ~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-------~~~~~~lv~e  108 (345)
T 3hko_A           36 QGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYE-------DEQYICLVME  108 (345)
T ss_dssp             ECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEE-------CSSEEEEEEE
T ss_pred             ecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhc-------cCCeEEEEEe
Confidence            5899999999999999999999997421    2344577899999999999999999999775       3447889999


Q ss_pred             cccCCCHHHHhcccCCC-----------------------------------ccccCCHHHHHHHHHHHHHHHHHhhcCC
Q 019481           81 LMQKKGLENVHIGEHPA-----------------------------------SVRQLRRAERLEIVTKMCQDLAFLHSSE  125 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~-----------------------------------~~~~l~~~~~~~i~~qi~~~L~yLH~~~  125 (340)
                      |+++|+|.+++......                                   ....+++..++.++.||++||+|||+  
T Consensus       109 ~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~--  186 (345)
T 3hko_A          109 LCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN--  186 (345)
T ss_dssp             CCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred             CCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH--
Confidence            99999999999631110                                   01235688899999999999999999  


Q ss_pred             CceecCCCCCCcEEecCCC--ceEEeccccceeecccCC-----cceeeccceeeccCccccc--hh-hhhHhHhCCccc
Q 019481          126 KQVIYRDFKAPNILLDETF--KCNLSDFSTAKVSAVENA-----DLTALDTSSVSAQSGKTGM--EM-KMAQLESGGWRA  195 (340)
Q Consensus       126 ~~iiHrDlKp~NILl~~~~--~~kl~DFGla~~~~~~~~-----~~~~~gt~~~~~p~~~~~~--~~-~~~~~~s~g~~~  195 (340)
                      ++|+||||||+|||++.++  .+||+|||+++.+.....     .....||+.|+|||.+.+.  .+ ...|+|+.|...
T Consensus       187 ~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il  266 (345)
T 3hko_A          187 QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL  266 (345)
T ss_dssp             TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHH
T ss_pred             CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHH
Confidence            8899999999999998776  899999999987654221     2355788889888654321  11 134666666666


Q ss_pred             cccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhcccccc--CcCC---ccccccccccCCCCchHHH
Q 019481          196 HDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTITFLSA--LKIT---GCKSEEGYKNNSSLNPICQ  270 (340)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p---~~~~~~~l~~dP~~R~t~~  270 (340)
                      +.+.++.  .||......             ......     ......+...  ...+   ..+...||+.||.+||+++
T Consensus       267 ~el~~g~--~pf~~~~~~-------------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~  326 (345)
T 3hko_A          267 HLLLMGA--VPFPGVNDA-------------DTISQV-----LNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAM  326 (345)
T ss_dssp             HHHHHSS--CSSCCSSHH-------------HHHHHH-----HHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHH
T ss_pred             HHHHHCC--CCCCCCChH-------------HHHHHH-----HhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHH
Confidence            5554443  232221110             000000     0000000000  0111   1234478999999999999


Q ss_pred             HhhcCcce
Q 019481          271 IVNQHPFY  278 (340)
Q Consensus       271 ~ll~hp~~  278 (340)
                      ++++|||+
T Consensus       327 ~~l~hp~~  334 (345)
T 3hko_A          327 RALQHPWI  334 (345)
T ss_dssp             HHHHSHHH
T ss_pred             HHhcChhh
Confidence            99999999

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=1.1e-37  Score=284.79  Aligned_cols=187  Identities=17%  Similarity=0.092  Sum_probs=137.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|++... ......+.+.+|+.+++.++||||++++++|...... .+....+++|||++
T Consensus        35 ~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~-~~~~~~~lv~e~~~  113 (371)
T 2xrw_A           35 SGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL-EEFQDVYIVMELMD  113 (371)
T ss_dssp             ECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCST-TTCCEEEEEEECCS
T ss_pred             ecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccc-ccccceEEEEEcCC
Confidence            589999999999999999999999753 3344557788999999999999999999988654322 23346789999997


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                       |+|.+.+..  .     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+|+........
T Consensus       114 -~~l~~~~~~--~-----~~~~~~~~i~~qi~~al~~lH~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~  183 (371)
T 2xrw_A          114 -ANLCQVIQM--E-----LDHERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM  183 (371)
T ss_dssp             -EEHHHHHHS--C-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEECTTSCEEECCCCC----------
T ss_pred             -CCHHHHHhh--c-----cCHHHHHHHHHHHHHHHHHHHH--CCeecccCCHHHEEEcCCCCEEEEEeeccccccccccc
Confidence             488888863  2     8999999999999999999999  88999999999999999999999999999877665555


Q ss_pred             ceeeccceeeccCccccchhh-hhHhHhCCcccccccccc
Q 019481          164 LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~  202 (340)
                      ...+||+.|+||+...+..+. ..|+|+.|...+.+.++.
T Consensus       184 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~  223 (371)
T 2xrw_A          184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG  223 (371)
T ss_dssp             ------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             CCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCC
Confidence            567889999999644332221 235666555555554443

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=8.9e-38  Score=274.80  Aligned_cols=234  Identities=12%  Similarity=0.031  Sum_probs=170.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|+++.. ........+.+|+..+.++ +||||++++++|..       ....++++||+
T Consensus        21 ~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~-------~~~~~lv~e~~   93 (289)
T 1x8b_A           21 SGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE-------DDHMLIQNEYC   93 (289)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE-------TTEEEEEEECC
T ss_pred             CCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec-------CCeEEEEEEec
Confidence            589999999999999999999999863 2234556788999999999 89999999997753       34778999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCC-------------------
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDET-------------------  143 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~-------------------  143 (340)
                      ++|+|.+++..... ....+++..++.++.||++||+|||+  ++|+||||||+|||++.+                   
T Consensus        94 ~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~--~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~  170 (289)
T 1x8b_A           94 NGGSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIHS--MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNK  170 (289)
T ss_dssp             TTCBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEEC--------------------C
T ss_pred             CCCcHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHHh--CCEeecCCCHHHEEEcCCCCCcccccccccccccCCc
Confidence            99999999986521 01238999999999999999999999  889999999999999844                   


Q ss_pred             CceEEeccccceeecccCCcceeeccceeeccCccccchh--hhhHhHhCCccccccccccccCCCCCCcccccCCCccC
Q 019481          144 FKCNLSDFSTAKVSAVENADLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKT  221 (340)
Q Consensus       144 ~~~kl~DFGla~~~~~~~~~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  221 (340)
                      ..+||+|||+++......   ...||+.|++||.+.+...  ...|+|+.|...+.+....                   
T Consensus       171 ~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~-------------------  228 (289)
T 1x8b_A          171 VMFKIGDLGHVTRISSPQ---VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAE-------------------  228 (289)
T ss_dssp             CCEEECCCTTCEETTCSC---CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCC-------------------
T ss_pred             eEEEEcccccccccCCcc---ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCC-------------------
Confidence            479999999998765433   3458888999865543322  2346666665555443222                   


Q ss_pred             CchhHHHHHHHHHHHHhhhhccccccCcCCccc-------cccccccCCCCchHHHHhhcCccee
Q 019481          222 ENETWNNFLYLLLIATLLSTITFLSALKITGCK-------SEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-------~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                        +++........       +.....+.+|..+       ...||+.||++|||++++++|||+.
T Consensus       229 --~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~  284 (289)
T 1x8b_A          229 --PLPRNGDQWHE-------IRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLL  284 (289)
T ss_dssp             --CCCSSSHHHHH-------HHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC-
T ss_pred             --CCCcchhHHHH-------HHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhh
Confidence              11100000000       0011112233222       3367999999999999999999993

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=2.9e-38  Score=277.93  Aligned_cols=237  Identities=13%  Similarity=0.093  Sum_probs=172.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|++....  .....+.+.+|++++++++||||++++++|.       +....++++||+
T Consensus        24 ~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~~   96 (284)
T 2vgo_A           24 KGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH-------DRKRIYLMLEFA   96 (284)
T ss_dssp             ECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE-------CSSEEEEEECCC
T ss_pred             CCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEE-------cCCEEEEEEEeC
Confidence            5899999999999999999999997422  1123467889999999999999999999765       344778999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      ++|+|.+++.....     +++..+..++.||++||+|||+  ++|+||||||+||+++.++++||+|||++...... .
T Consensus        97 ~~~~L~~~l~~~~~-----~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~-~  168 (284)
T 2vgo_A           97 PRGELYKELQKHGR-----FDEQRSATFMEELADALHYCHE--RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-R  168 (284)
T ss_dssp             TTEEHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHT--TTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS-C
T ss_pred             CCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCceecCCCHHHEEEcCCCCEEEecccccccCccc-c
Confidence            99999999988765     9999999999999999999999  88999999999999999999999999999766442 2


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      .....||+.|++|+...+..+. ..|+|+.|...+.+.++.  .||.....                   ..... ....
T Consensus       169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~--~pf~~~~~-------------------~~~~~-~~~~  226 (284)
T 2vgo_A          169 RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGM--PPFDSPSH-------------------TETHR-RIVN  226 (284)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSS--CTTCCSSH-------------------HHHHH-HHHT
T ss_pred             cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCC--CCCCCCCH-------------------hHHHH-HHhc
Confidence            3456788888888543322111 235555555444443333  22211110                   00000 0000


Q ss_pred             ccccccCcCCc---cccccccccCCCCchHHHHhhcCcce
Q 019481          242 ITFLSALKITG---CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       242 ~~~~~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ....-++..+.   ++...||+.||.+||+++++++|||+
T Consensus       227 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~  266 (284)
T 2vgo_A          227 VDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWV  266 (284)
T ss_dssp             TCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHH
T ss_pred             cccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHH
Confidence            11111111221   23447899999999999999999999

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=1.3e-37  Score=276.23  Aligned_cols=236  Identities=20%  Similarity=0.176  Sum_probs=173.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|+++........+.+.+|+.++++++||||++++++|..       ....++++||+++
T Consensus        32 ~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~~lv~e~~~~  104 (303)
T 3a7i_A           32 KGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-------DTKLWIIMEYLGG  104 (303)
T ss_dssp             ECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------TTEEEEEEECCTT
T ss_pred             ccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-------CCeEEEEEEeCCC
Confidence            589999999999999999999999865444556789999999999999999999997753       3367899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-Cc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-AD  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~~  163 (340)
                      ++|.+++...      .+++..+..++.|++.||.|||+  ++|+||||||+||+++.++++||+|||+++...... ..
T Consensus       105 ~~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  176 (303)
T 3a7i_A          105 GSALDLLEPG------PLDETQIATILREILKGLDYLHS--EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR  176 (303)
T ss_dssp             EEHHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCB
T ss_pred             CcHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHH--CCCccCCCChheEEECCCCCEEEeecccceecCcccccc
Confidence            9999999753      28999999999999999999999  789999999999999999999999999998776533 23


Q ss_pred             ceeeccceeeccCccccchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhc
Q 019481          164 LTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTI  242 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  242 (340)
                      ....||+.|++|+...+..+ ...|+|+.|...+.+.+                     +..+|.......... .   +
T Consensus       177 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~---------------------g~~p~~~~~~~~~~~-~---~  231 (303)
T 3a7i_A          177 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAR---------------------GEPPHSELHPMKVLF-L---I  231 (303)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH---------------------SSCTTTTSCHHHHHH-H---H
T ss_pred             CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHcc---------------------CCCCCCCcCHHHHHH-H---h
Confidence            45568888888854332211 12345554444444333                     222222111110000 0   0


Q ss_pred             cccccCcCCcc-------ccccccccCCCCchHHHHhhcCcceee
Q 019481          243 TFLSALKITGC-------KSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       243 ~~~~~~~~p~~-------~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                      .....+..+..       +...||+.||.+|||++++++|||+.+
T Consensus       232 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~  276 (303)
T 3a7i_A          232 PKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR  276 (303)
T ss_dssp             HHSCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHH
T ss_pred             hcCCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhc
Confidence            11111222222       234789999999999999999999943

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=4.2e-37  Score=276.21  Aligned_cols=179  Identities=13%  Similarity=0.099  Sum_probs=146.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|+++..    ..+.+.+|++++++++ ||||+++++++..     .+....++++||++
T Consensus        46 ~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~-----~~~~~~~lv~e~~~  116 (330)
T 3nsz_A           46 RGKYSEVFEAINITNNEKVVVKILKPV----KKKKIKREIKILENLRGGPNIITLADIVKD-----PVSRTPALVFEHVN  116 (330)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEECSC----CHHHHHHHHHHHHHHTTSTTBCCEEEEEEC-----TTTCCEEEEEECCC
T ss_pred             ccCCeEEEEEEECCCCcEEEEEEeccc----chHHHHHHHHHHHHcCCCCCEEEeeeeecc-----CCCCceEEEEeccC
Confidence            589999999999999999999999632    2466889999999997 9999999997753     23446789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC-ceEEeccccceeecccCC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF-KCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~-~~kl~DFGla~~~~~~~~  162 (340)
                      +++|.+++..        +++..++.++.||+.||+|||+  ++|+||||||+|||++.++ .+||+|||+|+.......
T Consensus       117 ~~~l~~~~~~--------~~~~~~~~~~~qi~~~l~~lH~--~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~  186 (330)
T 3nsz_A          117 NTDFKQLYQT--------LTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE  186 (330)
T ss_dssp             CCCHHHHGGG--------CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC
T ss_pred             chhHHHHHHh--------CCHHHHHHHHHHHHHHHHHHHh--CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc
Confidence            9999999853        8899999999999999999999  8899999999999999776 899999999998877666


Q ss_pred             cceeeccceeeccCccccchh--hhhHhHhCCcccccccccc
Q 019481          163 DLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~~  202 (340)
                      .....||+.|++|+.+.+...  ...|+|+.|...+.+.++.
T Consensus       187 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~  228 (330)
T 3nsz_A          187 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK  228 (330)
T ss_dssp             CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTC
T ss_pred             cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCC
Confidence            667788999999865443111  1346666666665554444

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=3.1e-37  Score=283.37  Aligned_cols=237  Identities=11%  Similarity=0.054  Sum_probs=165.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcC--CCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIF--HPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~--hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||+|.+.. ++.||+|+++.. ......+.+.+|+++|++++  ||||+++++++.       +....+++|| 
T Consensus        66 ~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~-------~~~~~~lv~E-  136 (390)
T 2zmd_A           66 SGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI-------TDQYIYMVME-  136 (390)
T ss_dssp             CCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-------CSSEEEEEEE-
T ss_pred             cCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEe-------cCCEEEEEEe-
Confidence            69999999999875 888999999763 34455678999999999997  599999999765       3346889999 


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +.+|+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++ ++.+||+|||+|+.+....
T Consensus       137 ~~~~~L~~~l~~~~~-----~~~~~~~~i~~qi~~aL~~lH~--~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~  208 (390)
T 2zmd_A          137 CGNIDLNSWLKKKKS-----IDPWERKSYWKNMLEAVHTIHQ--HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT  208 (390)
T ss_dssp             CCSEEHHHHHHHCSS-----CCHHHHHHHHHHHHHHHHHHHT--TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred             cCCCCHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence            567899999988765     8999999999999999999999  8899999999999995 5899999999998775433


Q ss_pred             C---cceeeccceeeccCccccc------------hhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhH
Q 019481          162 A---DLTALDTSSVSAQSGKTGM------------EMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETW  226 (340)
Q Consensus       162 ~---~~~~~gt~~~~~p~~~~~~------------~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  226 (340)
                      .   ....+||+.|+|||.+.+.            --...|+|+.|...+.                     +.+|..||
T Consensus       209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~e---------------------ll~G~~Pf  267 (390)
T 2zmd_A          209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY---------------------MTYGKTPF  267 (390)
T ss_dssp             -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHH---------------------HHHSSCTT
T ss_pred             ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHH---------------------HHHCCCcc
Confidence            2   2356789999998644321            0012344444444444                     43433333


Q ss_pred             HHHHHH-HHHHHhhh-hccccccCcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          227 NNFLYL-LLIATLLS-TITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       227 ~~~~~~-~~~~~~~~-~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ...... ........ ......+...+   .++...||+.||.+|||++++++|||+.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~  325 (390)
T 2zmd_A          268 QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ  325 (390)
T ss_dssp             TTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             hhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCcc
Confidence            221000 00000000 00000011111   1234478999999999999999999993

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=5.3e-39  Score=286.40  Aligned_cols=244  Identities=14%  Similarity=0.110  Sum_probs=167.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc--CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI--TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|+++..  ......+.+.+|++++++++||||+++++++.....   .....+++|||+
T Consensus        22 ~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~---~~~~~~lv~e~~   98 (311)
T 3ork_A           22 FGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP---AGPLPYIVMEYV   98 (311)
T ss_dssp             ECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEET---TEEEEEEEEECC
T ss_pred             cCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCC---CCcccEEEEecC
Confidence            589999999999999999999999753  233445678999999999999999999998764321   222458999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      +||+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.+.....
T Consensus        99 ~g~~L~~~l~~~~~-----~~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~  171 (311)
T 3ork_A           99 DGVTLRDIVHTEGP-----MTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN  171 (311)
T ss_dssp             CEEEHHHHHHHHCS-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCGGGEEEETTSCEEECCCSCC--------
T ss_pred             CCCCHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCCCcCCCCHHHEEEcCCCCEEEeeccCccccccccc
Confidence            99999999987765     9999999999999999999999  8899999999999999999999999999987654322


Q ss_pred             ----cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHH
Q 019481          163 ----DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIAT  237 (340)
Q Consensus       163 ----~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (340)
                          .....||+.|++||.+.+..+. ..|+|+.|...+.+.++.  .||........              ..    ..
T Consensus       172 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~--~pf~~~~~~~~--------------~~----~~  231 (311)
T 3ork_A          172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE--PPFTGDSPVSV--------------AY----QH  231 (311)
T ss_dssp             ----------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSS--CSCCCSSHHHH--------------HH----HH
T ss_pred             ccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCC--CCCCCCChHHH--------------HH----HH
Confidence                2335688888888644332221 235666555555554433  33222111000              00    00


Q ss_pred             hhhhccc--cccCcCCc---cccccccccCCCCchHHHHhhcCcce
Q 019481          238 LLSTITF--LSALKITG---CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       238 ~~~~~~~--~~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .......  ...+..+.   .+...||+.||.+||++.+++.|+|+
T Consensus       232 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~  277 (311)
T 3ork_A          232 VREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV  277 (311)
T ss_dssp             HHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             hcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHH
Confidence            0000000  00011222   23447899999999999999999998

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=2.9e-38  Score=287.87  Aligned_cols=187  Identities=16%  Similarity=0.137  Sum_probs=129.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|++..+++.||+|++... ......+.+.+|++++++++||||++++++|....... +....++++|++
T Consensus        38 G~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~-~~~~~~lv~e~~  116 (367)
T 2fst_X           38 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTHLM  116 (367)
T ss_dssp             C----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGG-GCCCCEEEEECC
T ss_pred             eecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccc-cCCeEEEEeccc
Confidence            3689999999999999999999999752 33445677889999999999999999999886542221 234578999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                       +++|.+++... .     +++..++.++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+|+.....  
T Consensus       117 -~~~L~~~~~~~-~-----l~~~~~~~i~~qi~~aL~~LH~--~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~--  185 (367)
T 2fst_X          117 -GADLNNIVKCQ-K-----LTDDHVQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE--  185 (367)
T ss_dssp             -CEECC-----C-C-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCGGGEEECTTCCEEECC------------
T ss_pred             -CCCHHHHHhcC-C-----CCHHHHHHHHHHHHHHHHHHHH--CCeeeCCCCHhhEEECCCCCEEEeecccccccccc--
Confidence             68999998763 3     8999999999999999999999  77999999999999999999999999999875432  


Q ss_pred             cceeeccceeeccCccccc-hh-hhhHhHhCCcccccccccc
Q 019481          163 DLTALDTSSVSAQSGKTGM-EM-KMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~-~~-~~~~~~s~g~~~~~~~~~~  202 (340)
                      .....||+.|+||+...+. .+ ...|+|+.|...+.+.++.
T Consensus       186 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~  227 (367)
T 2fst_X          186 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR  227 (367)
T ss_dssp             -----CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSS
T ss_pred             CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCC
Confidence            3456788888888644331 11 1246666666555554444

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=3.3e-37  Score=278.53  Aligned_cols=236  Identities=13%  Similarity=0.073  Sum_probs=164.6

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCC--CccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFH--PNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~h--pnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.||+|.+. +++.||+|+++.. ......+.+.+|+++|++++|  |||+++++++.       +....+++||
T Consensus        18 G~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~-------~~~~~~lv~e   89 (343)
T 3dbq_A           18 GSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI-------TDQYIYMVME   89 (343)
T ss_dssp             SCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-------CSSEEEEEEC
T ss_pred             ecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEe-------eCCEEEEEEe
Confidence            36999999999984 5788999999753 334556778999999999987  99999999765       3447889999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      + .+|+|.+++.....     +++..+..++.||+.||+|||+  ++|+||||||+|||++ ++.+||+|||+|+.....
T Consensus        90 ~-~~~~L~~~l~~~~~-----~~~~~~~~i~~qi~~al~~lH~--~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~  160 (343)
T 3dbq_A           90 C-GNIDLNSWLKKKKS-----IDPWERKSYWKNMLEAVHTIHQ--HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD  160 (343)
T ss_dssp             C-CSEEHHHHHHHSCC-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred             C-CCCCHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence            5 57899999998765     9999999999999999999999  8899999999999997 688999999999876543


Q ss_pred             CC---cceeeccceeeccCccccc------------hhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchh
Q 019481          161 NA---DLTALDTSSVSAQSGKTGM------------EMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENET  225 (340)
Q Consensus       161 ~~---~~~~~gt~~~~~p~~~~~~------------~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  225 (340)
                      ..   ....+||+.|+||+.+.+.            --...|+|+.|...+.+.                     +|..|
T Consensus       161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell---------------------~g~~p  219 (343)
T 3dbq_A          161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT---------------------YGKTP  219 (343)
T ss_dssp             ---------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHH---------------------HSSCT
T ss_pred             cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHH---------------------hCCCc
Confidence            32   2355788888888543220            001235555444444443                     33333


Q ss_pred             HHHHHHHHHHHHhhhhccccccCcCCc-------cccccccccCCCCchHHHHhhcCccee
Q 019481          226 WNNFLYLLLIATLLSTITFLSALKITG-------CKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~p~-------~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      |.........  ....+........|.       .+...||+.||.+|||++++++|||+.
T Consensus       220 f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~  278 (343)
T 3dbq_A          220 FQQIINQISK--LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ  278 (343)
T ss_dssp             TTTCCSHHHH--HHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             chhhhhHHHH--HHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcccc
Confidence            3221000000  000011111111111       234478999999999999999999994

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=2.7e-37  Score=273.45  Aligned_cols=241  Identities=18%  Similarity=0.136  Sum_probs=174.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc--------hhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCccee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP--------LQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYC   75 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~--------~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~   75 (340)
                      .|+||.||+|++..+++.||+|+++....        ....+.+.+|+++++++. ||||++++++|.       +....
T Consensus        27 ~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~-------~~~~~   99 (298)
T 1phk_A           27 RGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE-------TNTFF   99 (298)
T ss_dssp             ECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE-------CSSEE
T ss_pred             CCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec-------cCCeE
Confidence            58899999999999999999999975321        123466889999999996 999999999765       34478


Q ss_pred             eeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccce
Q 019481           76 WKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK  155 (340)
Q Consensus        76 ~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~  155 (340)
                      ++++||+++|+|.+++.....     +++..+..++.||+.||+|||+  ++|+||||||+||+++.++.+||+|||+++
T Consensus       100 ~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~  172 (298)
T 1phk_A          100 FLVFDLMKKGELFDYLTEKVT-----LSEKETRKIMRALLEVICALHK--LNIVHRDLKPENILLDDDMNIKLTDFGFSC  172 (298)
T ss_dssp             EEEEECCTTCBHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             EEEEeccCCCcHHHHHhccCC-----CCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCcceEEEcCCCcEEEecccchh
Confidence            899999999999999987655     9999999999999999999999  889999999999999999999999999999


Q ss_pred             eecccCCcceeeccceeeccCccccc------h-hhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHH
Q 019481          156 VSAVENADLTALDTSSVSAQSGKTGM------E-MKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNN  228 (340)
Q Consensus       156 ~~~~~~~~~~~~gt~~~~~p~~~~~~------~-~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (340)
                      ............||+.|++|+.+.+.      . -...|+|+.|...+.+.++.  .||.....              ..
T Consensus       173 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~--~p~~~~~~--------------~~  236 (298)
T 1phk_A          173 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS--PPFWHRKQ--------------ML  236 (298)
T ss_dssp             ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSS--CSSCCSSH--------------HH
T ss_pred             hcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCC--CCCcCccH--------------HH
Confidence            88766656667788888888543210      0 01235555555554444433  22211110              00


Q ss_pred             HHHHHHHHHhhhhccccc--cCcCCc---cccccccccCCCCchHHHHhhcCccee
Q 019481          229 FLYLLLIATLLSTITFLS--ALKITG---CKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~--~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ....    .......+..  .+..+.   .+...||+.||.+|||++++++|||+.
T Consensus       237 ~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~  288 (298)
T 1phk_A          237 MLRM----IMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ  288 (298)
T ss_dssp             HHHH----HHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             HHHH----HhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhh
Confidence            0000    0000000000  011111   234478999999999999999999993

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=2.5e-38  Score=281.12  Aligned_cols=239  Identities=16%  Similarity=0.093  Sum_probs=172.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|+++... ....+.+.+|++++++++||||++++++|.       +....++++||+++
T Consensus        19 ~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~~~~   90 (304)
T 2jam_A           19 SGAFSEVFLVKQRLTGKLFALKCIKKSP-AFRDSSLENEIAVLKKIKHENIVTLEDIYE-------STTHYYLVMQLVSG   90 (304)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEE-------CSSEEEEEECCCCS
T ss_pred             CCCCceEEEEEECCCCCEEEEEEEeccc-ccchHHHHHHHHHHHhCCCCCeeehhhhcc-------cCCEEEEEEEcCCC
Confidence            5899999999999999999999997532 223456889999999999999999999765       34477899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEe---cCCCceEEeccccceeecccC
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILL---DETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl---~~~~~~kl~DFGla~~~~~~~  161 (340)
                      |+|.+++.....     +++..+..++.|++.||+|||+  ++|+||||||+||++   +.++.+||+|||+++..... 
T Consensus        91 ~~L~~~l~~~~~-----~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-  162 (304)
T 2jam_A           91 GELFDRILERGV-----YTEKDASLVIQQVLSAVKYLHE--NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-  162 (304)
T ss_dssp             CBHHHHHHHHSC-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-
T ss_pred             ccHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-
Confidence            999999987665     9999999999999999999999  889999999999999   77899999999999765432 


Q ss_pred             CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      .....+||+.|+|||...+..+. ..|+|+.|...+.+.++.  .||......              .....  +..  .
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~--~pf~~~~~~--------------~~~~~--i~~--~  222 (304)
T 2jam_A          163 IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGY--PPFYEETES--------------KLFEK--IKE--G  222 (304)
T ss_dssp             TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSS--CTTTTSCHH--------------HHHHH--HHH--C
T ss_pred             ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCC--CCCCCCCHH--------------HHHHH--HHc--C
Confidence            33455789999999765443222 346666665555554433  232211110              00000  000  0


Q ss_pred             hccccc--cCcCCc---cccccccccCCCCchHHHHhhcCccee
Q 019481          241 TITFLS--ALKITG---CKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       241 ~~~~~~--~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ...+..  ....+.   ++...||+.||++|||++++++|||+.
T Consensus       223 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~  266 (304)
T 2jam_A          223 YYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWID  266 (304)
T ss_dssp             CCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHH
T ss_pred             CCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccc
Confidence            000000  011121   234477999999999999999999993

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=2.1e-37  Score=277.75  Aligned_cols=159  Identities=16%  Similarity=0.165  Sum_probs=131.3

Q ss_pred             CCcceEEEEEEcCCCCc---eEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRD---DVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~---~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||+|++..+++   .||+|+++........+.+.+|++++++++||||++++++|..       ....+++|||
T Consensus        59 ~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~~~lv~e~  131 (325)
T 3kul_A           59 SGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR-------GRLAMIVTEY  131 (325)
T ss_dssp             ETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG-------GGCCEEEEEC
T ss_pred             eCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-------CCccEEEeeC
Confidence            58999999999986555   4999999865556667789999999999999999999997753       3467799999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.++++....    .+++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++......
T Consensus       132 ~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~~L~~LH~--~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  205 (325)
T 3kul_A          132 MENGSLDTFLRTHDG----QFTIMQLVGMLRGVGAGMRYLSD--LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP  205 (325)
T ss_dssp             CTTCBHHHHHHTTTT----CSCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred             CCCCcHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHH--CCeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence            999999999976643    39999999999999999999999  889999999999999999999999999998775532


Q ss_pred             Ccc----eeeccceeeccC
Q 019481          162 ADL----TALDTSSVSAQS  176 (340)
Q Consensus       162 ~~~----~~~gt~~~~~p~  176 (340)
                      ...    ...+|..|++|+
T Consensus       206 ~~~~~~~~~~~t~~y~aPE  224 (325)
T 3kul_A          206 DAAYTTTGGKIPIRWTAPE  224 (325)
T ss_dssp             -CCEECC---CCGGGSCHH
T ss_pred             cceeeccCCCCcccccCHh
Confidence            211    123455677774

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=4.7e-37  Score=272.14  Aligned_cols=243  Identities=14%  Similarity=0.099  Sum_probs=168.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCcccccccccccccc------ccCCcceeeee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNIC------LTGDRRYCWKN   78 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~------~~~~~~~~~~~   78 (340)
                      .|+||.||+|++..+++.||+|+++.  .....+.+.+|++++++++||||++++++|.....      ...+....+++
T Consensus        16 ~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv   93 (303)
T 1zy4_A           16 QGAFGQVVKARNALDSRYYAIKKIRH--TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQ   93 (303)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEEEE--EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEE
T ss_pred             cCCcEEEEEEEEcCCCeEEEEEEEec--cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEE
Confidence            58999999999999999999999963  34456778999999999999999999998754321      12345678899


Q ss_pred             eccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec
Q 019481           79 KWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      +||+++|+|.+++.....    .+++..++.++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+++...
T Consensus        94 ~e~~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~LH~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  167 (303)
T 1zy4_A           94 MEYCENGTLYDLIHSENL----NQQRDEYWRLFRQILEALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVH  167 (303)
T ss_dssp             EECCCSCBHHHHHHHSCG----GGCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEECTTSCEEECCCCCCSCTT
T ss_pred             EecCCCCCHHHhhhcccc----ccchHHHHHHHHHHHHHHHHHHh--CCeecccCCHHhEEEcCCCCEEEeeCcchhhcc
Confidence            999999999999986543    48899999999999999999999  889999999999999999999999999997654


Q ss_pred             cc---------------CCcceeeccceeeccCccccch--hhhhHhHhCCccccccccccccCCCCCCcccccCCCccC
Q 019481          159 VE---------------NADLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKT  221 (340)
Q Consensus       159 ~~---------------~~~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  221 (340)
                      ..               .......||+.|++|+.+.+.+  -...|+|+.|...+.+                     .+
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l---------------------~~  226 (303)
T 1zy4_A          168 RSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM---------------------IY  226 (303)
T ss_dssp             C-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHH---------------------HS
T ss_pred             cccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHH---------------------Hh
Confidence            32               1123446777777775443221  1123555544444433                     32


Q ss_pred             CchhHHHHHHHHHHHHhhhhccccccCcCCc-------cccccccccCCCCchHHHHhhcCccee
Q 019481          222 ENETWNNFLYLLLIATLLSTITFLSALKITG-------CKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-------~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      +..........   ...........++..+.       .+...||+.||.+|||++++++|||+.
T Consensus       227 p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~  288 (303)
T 1zy4_A          227 PFSTGMERVNI---LKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLP  288 (303)
T ss_dssp             CCSSHHHHHHH---HHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSC
T ss_pred             ccCCchhHHHH---HHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcC
Confidence            11111111111   00111111111122221       234478999999999999999999993

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=5.5e-37  Score=279.84  Aligned_cols=185  Identities=15%  Similarity=0.100  Sum_probs=143.1

Q ss_pred             CCcceEEEEEEcC-------CCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceee
Q 019481            5 APSFSVLIHVPFP-------DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCW   76 (340)
Q Consensus         5 ~G~fg~V~~~~~~-------~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~   76 (340)
                      .|+||.||+|++.       .++..||+|+++........+.+.+|+++++++ +||||++++++|.       +....+
T Consensus        91 ~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~-------~~~~~~  163 (370)
T 2psq_A           91 EGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-------QDGPLY  163 (370)
T ss_dssp             CCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC-------SSSSCE
T ss_pred             eCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc-------cCCCEE
Confidence            6899999999864       345679999998665566677899999999999 8999999999765       334678


Q ss_pred             eeeccccCCCHHHHhcccCCC-----------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCc
Q 019481           77 KNKWLMQKKGLENVHIGEHPA-----------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFK  145 (340)
Q Consensus        77 ~~~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~  145 (340)
                      ++|||+++|+|.+++......           ....+++..+..++.||+.||+|||+  ++|+||||||+|||++.++.
T Consensus       164 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~--~~ivHrDlkp~NIll~~~~~  241 (370)
T 2psq_A          164 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNV  241 (370)
T ss_dssp             EEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH--TTEECSCCCGGGEEECTTCC
T ss_pred             EEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh--CCeeccccchhhEEECCCCC
Confidence            999999999999999875421           11348999999999999999999999  88999999999999999999


Q ss_pred             eEEeccccceeecccCC---cceeeccceeeccCccccchhh-hhHhHhCCcccccc
Q 019481          146 CNLSDFSTAKVSAVENA---DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDE  198 (340)
Q Consensus       146 ~kl~DFGla~~~~~~~~---~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~  198 (340)
                      +||+|||+|+.......   .....+|+.|+|||.+.+..+. ..|+|+.|...+.+
T Consensus       242 ~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el  298 (370)
T 2psq_A          242 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI  298 (370)
T ss_dssp             EEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHH
T ss_pred             EEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHH
Confidence            99999999987654321   2233566778888633222111 23555555444443

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=1.2e-37  Score=280.10  Aligned_cols=184  Identities=16%  Similarity=0.134  Sum_probs=143.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|++... ......+.+.+|++++++++||||+++++++.       +....+++|||++
T Consensus        35 ~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------~~~~~~lv~e~~~  107 (331)
T 4aaa_A           35 EGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCK-------KKKRWYLVFEFVD  107 (331)
T ss_dssp             GGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-------ETTEEEEEEECCS
T ss_pred             ecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEee-------cCCEEEEEEecCC
Confidence            689999999999999999999998753 33344566889999999999999999999765       3346789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-CC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-NA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~~  162 (340)
                      +++|.+++.....     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++..... ..
T Consensus       108 ~~~l~~~~~~~~~-----~~~~~~~~~~~qi~~~l~~LH~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  180 (331)
T 4aaa_A          108 HTILDDLELFPNG-----LDYQVVQKYLFQIINGIGFCHS--HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV  180 (331)
T ss_dssp             EEHHHHHHHSTTC-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred             cchHHHHHhhccC-----CCHHHHHHHHHHHHHHHHHHHH--CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccc
Confidence            9999988776665     9999999999999999999999  88999999999999999999999999999876543 23


Q ss_pred             cceeeccceeeccCccccc-h-hhhhHhHhCCcccccccccc
Q 019481          163 DLTALDTSSVSAQSGKTGM-E-MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~-~-~~~~~~~s~g~~~~~~~~~~  202 (340)
                      .....||+.|++|+.+.+. . -...|+|+.|...+.+.++.
T Consensus       181 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~  222 (331)
T 4aaa_A          181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE  222 (331)
T ss_dssp             ---CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSS
T ss_pred             cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCC
Confidence            3455788888888654432 1 11346666666665554443

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=8.2e-38  Score=285.53  Aligned_cols=246  Identities=9%  Similarity=-0.056  Sum_probs=155.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhc--CCCcccccccccc-------ccccc-----
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEI--FHPNQVKPSGYWS-------MNICL-----   68 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l--~hpnIv~l~~~f~-------~~~~~-----   68 (340)
                      .|+||.||+|++..+++.||+|++....  .....+.+.+|+++++.+  +||||++++..|.       ....-     
T Consensus        72 ~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~  151 (371)
T 3q60_A           72 VGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQL  151 (371)
T ss_dssp             ECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSCSSSBC
T ss_pred             CCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCCCeeec
Confidence            5899999999999999999999998643  334456678885555444  6999988665442       11000     


Q ss_pred             -----cCCcceeeeeeccccCCCHHHHhcccCCCccccCCHHHH------HHHHHHHHHHHHHhhcCCCceecCCCCCCc
Q 019481           69 -----TGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAER------LEIVTKMCQDLAFLHSSEKQVIYRDFKAPN  137 (340)
Q Consensus        69 -----~~~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~------~~i~~qi~~~L~yLH~~~~~iiHrDlKp~N  137 (340)
                           .......+++|||++ |+|.+++.....    .+++..+      ..++.||++||+|||+  ++|+||||||+|
T Consensus       152 ~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~vk~~i~~qi~~aL~~LH~--~~ivHrDikp~N  224 (371)
T 3q60_A          152 SPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF----VYVFRGDEGILALHILTAQLIRLAANLQS--KGLVHGHFTPDN  224 (371)
T ss_dssp             SCC---CCEEEEEEEECCCS-EEHHHHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHHHHH--TTEEETTCSGGG
T ss_pred             cCCcccceeeeEEEEecCCC-CCHHHHHHHhcc----ccchhhhhhhhhHHHHHHHHHHHHHHHHH--CCCccCcCCHHH
Confidence                 000135789999998 899999987543    2455555      6777999999999999  889999999999


Q ss_pred             EEecCCCceEEeccccceeecccCCcceeeccceeeccCcccc--chh-hhhHhHhCCccccccccccccCCCCCCccc-
Q 019481          138 ILLDETFKCNLSDFSTAKVSAVENADLTALDTSSVSAQSGKTG--MEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLK-  213 (340)
Q Consensus       138 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~gt~~~~~p~~~~~--~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~-  213 (340)
                      ||++.++++||+|||+|+......  ....+|+.|+|||.+.+  ..+ ...|+|+.|...+.+.++.  .||...... 
T Consensus       225 Ill~~~~~~kL~DFG~a~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~--~Pf~~~~~~~  300 (371)
T 3q60_A          225 LFIMPDGRLMLGDVSALWKVGTRG--PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF--LPFGLVTPGI  300 (371)
T ss_dssp             EEECTTSCEEECCGGGEEETTCEE--EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSS--CSTTBCCTTC
T ss_pred             EEECCCCCEEEEecceeeecCCCc--cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCC--CCCCCcCccc
Confidence            999999999999999998764322  24456788999975543  111 1336666666666554444  333222111 


Q ss_pred             -ccCC-----CccCCchhHHHHHHHHHHHHhhhhccccccCcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          214 -NTRP-----NLKTENETWNNFLYLLLIATLLSTITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       214 -~~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                       ....     ........++                  ..+.++   .++...||+.||++|||++++++|||+.
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~  357 (371)
T 3q60_A          301 KGSWKRPSLRVPGTDSLAFG------------------SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFL  357 (371)
T ss_dssp             TTCCCBCCTTSCCCCSCCCT------------------TSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHH
T ss_pred             ccchhhhhhhhccccccchh------------------hccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHH
Confidence             0000     0000000000                  000111   1223478999999999999999999993

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=1.6e-37  Score=282.29  Aligned_cols=192  Identities=16%  Similarity=0.081  Sum_probs=141.9

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|++..+++.||+|++...  ........+|++.++.++||||++++++|...........+.+++|||++
T Consensus        32 g~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~  109 (360)
T 3e3p_A           32 GQGTFGTVQLGKEKSTGMSVAIKKVIQD--PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP  109 (360)
T ss_dssp             -------CEEEEETTTCCEEEEEEEECC--TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCS
T ss_pred             ecCCCeEEEEEEECCCCCEEEEEEEecC--ccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeeccc
Confidence            3689999999999999999999998642  22234567788889999999999999998754433344556889999998


Q ss_pred             CCCHHHHhccc-CCCccccCCHHHHHHHHHHHHHHHHHhh--cCCCceecCCCCCCcEEecC-CCceEEeccccceeecc
Q 019481           84 KKGLENVHIGE-HPASVRQLRRAERLEIVTKMCQDLAFLH--SSEKQVIYRDFKAPNILLDE-TFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        84 ~gsL~~~l~~~-~~~~~~~l~~~~~~~i~~qi~~~L~yLH--~~~~~iiHrDlKp~NILl~~-~~~~kl~DFGla~~~~~  159 (340)
                      + +|.+.+... ..  ...+++..+..++.|++.||.|||  +  ++|+||||||+|||++. ++.+||+|||+++....
T Consensus       110 ~-~l~~~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~--~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~  184 (360)
T 3e3p_A          110 D-TLHRCCRNYYRR--QVAPPPILIKVFLFQLIRSIGCLHLPS--VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSP  184 (360)
T ss_dssp             C-BHHHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHTSTT--TCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCT
T ss_pred             c-cHHHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHhCCC--CCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCC
Confidence            6 555444321 11  123899999999999999999999  8  78999999999999997 89999999999998877


Q ss_pred             cCCcceeeccceeeccCccccch--hhhhHhHhCCcccccccccc
Q 019481          160 ENADLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~  202 (340)
                      ........||+.|+||+.+.+..  -...|+|+.|...+.+.++.
T Consensus       185 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~  229 (360)
T 3e3p_A          185 SEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGE  229 (360)
T ss_dssp             TSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            66666778899999997553322  12346676666666655444

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-37  Score=281.28  Aligned_cols=183  Identities=20%  Similarity=0.153  Sum_probs=143.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCch----hhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPL----QLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~----~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|+||.||+|++..+++.||+|+++.....    ...+.+.+|++++++++||||++++++|.       +....++++|
T Consensus        20 ~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------~~~~~~lv~e   92 (346)
T 1ua2_A           20 EGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFG-------HKSNISLVFD   92 (346)
T ss_dssp             EETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEEC-------CTTCCEEEEE
T ss_pred             ecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEe-------eCCceEEEEE
Confidence            589999999999999999999999752211    12346789999999999999999999765       3446779999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      |+++ +|.+.+.....    .+++..+..++.|+++||+|||+  ++|+||||||+|||++.++.+||+|||+++.....
T Consensus        93 ~~~~-~l~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~--~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~  165 (346)
T 1ua2_A           93 FMET-DLEVIIKDNSL----VLTPSHIKAYMLMTLQGLEYLHQ--HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP  165 (346)
T ss_dssp             CCSE-EHHHHHTTCCS----SCCSSHHHHHHHHHHHHHHHHHH--TTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred             cCCC-CHHHHHHhcCc----CCCHHHHHHHHHHHHHHHHHHHH--CCEECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence            9985 99999887653    48999999999999999999999  88999999999999999999999999999876543


Q ss_pred             -CCcceeeccceeeccCccccchh--hhhHhHhCCccccccccc
Q 019481          161 -NADLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEK  201 (340)
Q Consensus       161 -~~~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~  201 (340)
                       ......+||+.|+|||...+.+.  ...|+|+.|...+.+.++
T Consensus       166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g  209 (346)
T 1ua2_A          166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLR  209 (346)
T ss_dssp             CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHS
T ss_pred             cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHC
Confidence             23345678999999975543221  134666666666655443

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=5e-38  Score=291.41  Aligned_cols=188  Identities=19%  Similarity=0.128  Sum_probs=143.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|++....     ....+|+++|++++||||++++++|..... ..+..+.++++||+++
T Consensus        64 ~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~il~~l~hpniv~l~~~~~~~~~-~~~~~~~~lv~e~~~~  137 (420)
T 1j1b_A           64 NGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFFYSSGE-KKDEVYLNLVLDYVPE  137 (420)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEEECCT-----TSCCHHHHHHHTCCCTTBCCEEEEEEEEET-TTTEEEEEEEEECCCE
T ss_pred             eCCCEEEEEEEECCCCcEEEEEEecccc-----hhHHHHHHHHHHcCCCCccceeeEEeccCC-CCcceeEEeehhcccc
Confidence            5899999999999999999999986422     223579999999999999999998854321 2344567899999975


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCC-CceEEeccccceeecccCCc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDET-FKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~-~~~kl~DFGla~~~~~~~~~  163 (340)
                       +|.+.+..... ....+++..++.++.||++||+|||+  ++|+||||||+|||++.+ +.+||+|||+|+.+......
T Consensus       138 -~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~--~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~~  213 (420)
T 1j1b_A          138 -TVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN  213 (420)
T ss_dssp             -EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHT--TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCC
T ss_pred             -cHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHH--CCccccCCChhhEEEeCCCCeEEeccchhhhhcccCCCc
Confidence             77666653110 01249999999999999999999999  889999999999999965 67899999999988776666


Q ss_pred             ceeeccceeeccCccccc-hh-hhhHhHhCCcccccccccc
Q 019481          164 LTALDTSSVSAQSGKTGM-EM-KMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~-~~-~~~~~~s~g~~~~~~~~~~  202 (340)
                      ...+||+.|+|||.+.+. .+ ...|+|+.|...+++.++.
T Consensus       214 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~  254 (420)
T 1j1b_A          214 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ  254 (420)
T ss_dssp             CSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             eeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCC
Confidence            677889999999654332 11 1236666666555554443

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=1.4e-37  Score=275.15  Aligned_cols=184  Identities=14%  Similarity=0.100  Sum_probs=143.4

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeec--cCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHEL--ITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~--~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|++..  .......+.+.+|+.++++++||||+++++++.       +....+++|||+
T Consensus        21 ~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~-------~~~~~~lv~e~~   93 (294)
T 4eqm_A           21 GGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDE-------EDDCYYLVMEYI   93 (294)
T ss_dssp             EETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEE-------CSSEEEEEEECC
T ss_pred             cCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeee-------eCCeEEEEEeCC
Confidence            58999999999999999999999865  233445677899999999999999999999765       444778999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-  161 (340)
                      +||+|.+++.....     +++..+..++.|++.||+|||+  ++|+||||||+|||++.++++||+|||+++...... 
T Consensus        94 ~g~~L~~~l~~~~~-----~~~~~~~~~~~qi~~~l~~lH~--~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  166 (294)
T 4eqm_A           94 EGPTLSEYIESHGP-----LSVDTAINFTNQILDGIKHAHD--MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL  166 (294)
T ss_dssp             CSCBHHHHHHHHCS-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred             CCCCHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence            99999999988765     9999999999999999999999  789999999999999999999999999998765432 


Q ss_pred             -CcceeeccceeeccCccccchhh-hhHhHhCCcccccccccc
Q 019481          162 -ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       162 -~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~  202 (340)
                       .....+||+.|++|+...+.... ..|+|+.|...+.+.++.
T Consensus       167 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~  209 (294)
T 4eqm_A          167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE  209 (294)
T ss_dssp             --------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCC
Confidence             23345788989988644332221 235555555555444433

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=9.4e-37  Score=273.21  Aligned_cols=183  Identities=17%  Similarity=0.187  Sum_probs=145.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++.  ++.||+|+++..  ........+|+.++++++||||+++++++.....   .....+++|||+++
T Consensus        34 ~G~~g~Vy~~~~~--~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~---~~~~~~lv~e~~~~  106 (322)
T 3soc_A           34 RGRFGCVWKAQLL--NEYVAVKIFPIQ--DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTS---VDVDLWLITAFHEK  106 (322)
T ss_dssp             CSTTCEEEEEEET--TEEEEEEEECGG--GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS---SSEEEEEEEECCTT
T ss_pred             ccCceEEEEEEEC--CCEEEEEEeecC--chHHHHHHHHHHHHhcCCCCCchhhcceeccCCC---CCceEEEEEecCCC
Confidence            6899999999875  789999999643  2334456779999999999999999998764321   13356899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCC----------ceecCCCCCCcEEecCCCceEEeccccc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEK----------QVIYRDFKAPNILLDETFKCNLSDFSTA  154 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~----------~iiHrDlKp~NILl~~~~~~kl~DFGla  154 (340)
                      |+|.++++...      +++..+..++.||+.||+|||+  .          +|+||||||+|||++.++.+||+|||+|
T Consensus       107 g~L~~~l~~~~------~~~~~~~~i~~qi~~al~~LH~--~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a  178 (322)
T 3soc_A          107 GSLSDFLKANV------VSWNELCHIAETMARGLAYLHE--DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA  178 (322)
T ss_dssp             CBHHHHHHHCC------BCHHHHHHHHHHHHHHHHHHTC--CEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             CCHHHHHHhcC------CCHHHHHHHHHHHHHHHHHHHh--hccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcc
Confidence            99999997643      8999999999999999999999  7          8999999999999999999999999999


Q ss_pred             eeecccCC---cceeeccceeeccCcccc-----chh-hhhHhHhCCcccccccccc
Q 019481          155 KVSAVENA---DLTALDTSSVSAQSGKTG-----MEM-KMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       155 ~~~~~~~~---~~~~~gt~~~~~p~~~~~-----~~~-~~~~~~s~g~~~~~~~~~~  202 (340)
                      +.......   .....||+.|+|||.+.+     ..+ ...|+|+.|...+.+.++.
T Consensus       179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~  235 (322)
T 3soc_A          179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRC  235 (322)
T ss_dssp             EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred             cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCC
Confidence            87765332   233578999999975443     111 1337777777776665554

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=4.2e-37  Score=271.05  Aligned_cols=245  Identities=19%  Similarity=0.140  Sum_probs=156.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhH-HHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLR-RDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~-~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|+++........ +.+..+...++.++||||+++++++.       +....++++||++
T Consensus        17 ~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~-------~~~~~~lv~e~~~   89 (290)
T 3fme_A           17 RGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALF-------REGDVWICMELMD   89 (290)
T ss_dssp             ECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-------CSSSEEEEEECCS
T ss_pred             CCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeee-------ccCCEEEEEehhc
Confidence            589999999999999999999999764333333 33445555688899999999999775       3346789999997


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCC-ceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEK-QVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~-~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                       |+|.+++..... ....+++..++.++.|++.||+|||+  + +|+||||||+||+++.++++||+|||+++.......
T Consensus        90 -~~l~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  165 (290)
T 3fme_A           90 -TSLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA  165 (290)
T ss_dssp             -EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHH--HSCCCCCCCSGGGCEECTTCCEEBCCC-----------
T ss_pred             -cchHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhh--cCCeecCCCCHHHEEECCCCCEEEeecCCccccccccc
Confidence             588877764210 01249999999999999999999999  6 799999999999999999999999999988766655


Q ss_pred             cceeeccceeeccCcc----ccchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHH
Q 019481          163 DLTALDTSSVSAQSGK----TGMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIAT  237 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~----~~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (340)
                      .....||+.|++|+.+    .+..+ ...|+|+.|...+.+.++.  .||....            .+.......     
T Consensus       166 ~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~--~p~~~~~------------~~~~~~~~~-----  226 (290)
T 3fme_A          166 KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR--FPYDSWG------------TPFQQLKQV-----  226 (290)
T ss_dssp             ----CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTS--CSSCCCS------------CHHHHHHHH-----
T ss_pred             ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCC--CCccccC------------chHHHHHHH-----
Confidence            5566789989988653    11111 1346666666665554444  3322100            001111110     


Q ss_pred             hhhhccccccCcCCc---cccccccccCCCCchHHHHhhcCccee
Q 019481          238 LLSTITFLSALKITG---CKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       238 ~~~~~~~~~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      .............+.   .+...||+.||.+|||++++++|||+.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~  271 (290)
T 3fme_A          227 VEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFT  271 (290)
T ss_dssp             HHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred             hccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccc
Confidence            000000000011111   123478999999999999999999994

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=3.1e-38  Score=278.22  Aligned_cols=240  Identities=15%  Similarity=0.122  Sum_probs=173.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|++.... .....+.+.+|++++++++||||+++++++.       +....++++||++
T Consensus        32 ~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~~~  104 (287)
T 2wei_A           32 KGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE-------DSSSFYIVGELYT  104 (287)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEE-------CSSEEEEEECCCC
T ss_pred             CCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEe-------CCCeEEEEEEccC
Confidence            5889999999999999999999997532 2334577899999999999999999999765       3447789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCC---CceEEeccccceeeccc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDET---FKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~---~~~kl~DFGla~~~~~~  160 (340)
                      +++|.+.+.....     +++..+..++.||+.||+|||+  ++|+||||||+||+++.+   +.+||+|||+++.....
T Consensus       105 ~~~L~~~l~~~~~-----~~~~~~~~i~~qi~~~l~~LH~--~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~  177 (287)
T 2wei_A          105 GGELFDEIIKRKR-----FSEHDAARIIKQVFSGITYMHK--HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN  177 (287)
T ss_dssp             SCBHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC
T ss_pred             CCCHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeeccCCChhhEEEecCCCcccEEEeccCcceeecCC
Confidence            9999999987665     9999999999999999999999  789999999999999764   46999999999877665


Q ss_pred             CCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      .......||+.|++|+...+.--...|+|+.|...+.+.++.  .||......              .....    ....
T Consensus       178 ~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~--~p~~~~~~~--------------~~~~~----~~~~  237 (287)
T 2wei_A          178 TKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGT--PPFYGKNEY--------------DILKR----VETG  237 (287)
T ss_dssp             SSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSS--CSSCCSSHH--------------HHHHH----HHHC
T ss_pred             CccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCC--CCCCCCCHH--------------HHHHH----HHcC
Confidence            555556788888888644332222345555555554444333  222111110              00000    0000


Q ss_pred             hcccc--ccCcCCc---cccccccccCCCCchHHHHhhcCcce
Q 019481          241 TITFL--SALKITG---CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~--~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ...+.  ....++.   .+...||+.||.+|||++++++|||+
T Consensus       238 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~  280 (287)
T 2wei_A          238 KYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWI  280 (287)
T ss_dssp             CCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHH
T ss_pred             CCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHH
Confidence            00000  0011121   23447899999999999999999999

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.1e-37  Score=279.18  Aligned_cols=238  Identities=18%  Similarity=0.094  Sum_probs=174.4

Q ss_pred             CCcceEEEEEEcC---CCCceEEEEEeeccC---chhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeee
Q 019481            5 APSFSVLIHVPFP---DDRDDVMLKLHELIT---PLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWK   77 (340)
Q Consensus         5 ~G~fg~V~~~~~~---~~~~~vAiK~~~~~~---~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~   77 (340)
                      .|+||.||+|++.   .+++.||+|+++...   .....+.+.+|+++++++ +||||++++++|..       ....++
T Consensus        64 ~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-------~~~~~l  136 (355)
T 1vzo_A           64 TGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT-------ETKLHL  136 (355)
T ss_dssp             ETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE-------TTEEEE
T ss_pred             cCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee-------CceEEE
Confidence            5899999999984   588999999987422   123345677899999999 69999999997753       336789


Q ss_pred             eeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceee
Q 019481           78 NKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVS  157 (340)
Q Consensus        78 ~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~  157 (340)
                      +|||+++|+|.+++.....     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++++||+|||+++..
T Consensus       137 v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~qi~~aL~~LH~--~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~  209 (355)
T 1vzo_A          137 ILDYINGGELFTHLSQRER-----FTEHEVQIYVGEIVLALEHLHK--LGIIYRDIKLENILLDSNGHVVLTDFGLSKEF  209 (355)
T ss_dssp             EECCCCSCBHHHHHHHHSC-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred             EeecCCCCCHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence            9999999999999987665     9999999999999999999999  88999999999999999999999999999876


Q ss_pred             cccC--CcceeeccceeeccCccccch--h-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHH
Q 019481          158 AVEN--ADLTALDTSSVSAQSGKTGME--M-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYL  232 (340)
Q Consensus       158 ~~~~--~~~~~~gt~~~~~p~~~~~~~--~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (340)
                      ....  .....+||+.|++|+.+.+..  + ...|+|+.|...+.+.++.  .||.......          ........
T Consensus       210 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~--~pf~~~~~~~----------~~~~~~~~  277 (355)
T 1vzo_A          210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA--SPFTVDGEKN----------SQAEISRR  277 (355)
T ss_dssp             CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSS--CTTSCTTSCC----------CHHHHHHH
T ss_pred             ccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCC--CCCccCCccc----------hHHHHHHH
Confidence            4432  233457899999996554311  1 2347777777666665544  3322111100          00001100


Q ss_pred             HHHHHhhhhccccccCcCCc-------cccccccccCCCCch-----HHHHhhcCcce
Q 019481          233 LLIATLLSTITFLSALKITG-------CKSEEGYKNNSSLNP-----ICQIVNQHPFY  278 (340)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~p~-------~~~~~~l~~dP~~R~-----t~~~ll~hp~~  278 (340)
                           .     ....+..|.       .+...||+.||.+||     +++++++|||+
T Consensus       278 -----~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f  325 (355)
T 1vzo_A          278 -----I-----LKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF  325 (355)
T ss_dssp             -----H-----HHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGG
T ss_pred             -----H-----hccCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcch
Confidence                 0     011122222       234478999999999     99999999999

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=3.6e-36  Score=265.74  Aligned_cols=240  Identities=14%  Similarity=0.052  Sum_probs=170.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|.++... ....+.+.+|+.++++++||||++++++|..       ....++++||+++
T Consensus        32 ~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------~~~~~lv~e~~~~  103 (295)
T 2clq_A           32 KGTYGIVYAGRDLSNQVRIAIKEIPERD-SRYSQPLHEEIALHKHLKHKNIVQYLGSFSE-------NGFIKIFMEQVPG  103 (295)
T ss_dssp             ECSSSEEEEEEETTTCCEEEEEEEECCC-C---HHHHHHHHHHHTCCCTTBCCEEEEEEE-------TTEEEEEEECCSE
T ss_pred             ecCcEEEEEEEECCCCeEEEEEEccCCc-hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEe-------CCcEEEEEEeCCC
Confidence            5899999999999999999999997543 3445678999999999999999999997753       3367899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC-CCceEEeccccceeecccC-C
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE-TFKCNLSDFSTAKVSAVEN-A  162 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~-~~~~kl~DFGla~~~~~~~-~  162 (340)
                      ++|.+++.....  ...+++..+..++.||+.||+|||+  ++|+||||||+||+++. ++.+||+|||+++...... .
T Consensus       104 ~~L~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~  179 (295)
T 2clq_A          104 GSLSALLRSKWG--PLKDNEQTIGFYTKQILEGLKYLHD--NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC  179 (295)
T ss_dssp             EEHHHHHHHTTC--CCTTCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred             CCHHHHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHHh--CCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCc
Confidence            999999987543  1347799999999999999999999  88999999999999988 8999999999998765432 2


Q ss_pred             cceeeccceeeccCccccch--h-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          163 DLTALDTSSVSAQSGKTGME--M-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~--~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      .....||+.|++|+...+..  + ...|+|+.|...+.+.++.                     .+|..........  .
T Consensus       180 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~---------------------~pf~~~~~~~~~~--~  236 (295)
T 2clq_A          180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK---------------------PPFYELGEPQAAM--F  236 (295)
T ss_dssp             -CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTS---------------------CTTGGGSSHHHHH--H
T ss_pred             ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCC---------------------CCccCCCchhHHH--H
Confidence            33456888888885443211  1 1235555555554443332                     2222110000000  0


Q ss_pred             hhccccccCcCCccc-------cccccccCCCCchHHHHhhcCccee
Q 019481          240 STITFLSALKITGCK-------SEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       240 ~~~~~~~~~~~p~~~-------~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ........+.+|..+       ...||+.||.+|||++++++|||+.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~  283 (295)
T 2clq_A          237 KVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK  283 (295)
T ss_dssp             HHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGC
T ss_pred             hhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhh
Confidence            000011222333322       3478999999999999999999993

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=2.8e-37  Score=285.26  Aligned_cols=188  Identities=18%  Similarity=0.147  Sum_probs=133.6

Q ss_pred             CCCcceEEEEEEcC--CCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFP--DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~--~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|+++  .+++.||+|+++...   ..+.+.+|+++|++++||||++++++|..     .+....++++||
T Consensus        30 G~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~~~~~~lv~e~  101 (405)
T 3rgf_A           30 GRGTYGHVYKAKRKDGKDDKDYALKQIEGTG---ISMSACREIALLRELKHPNVISLQKVFLS-----HADRKVWLLFDY  101 (405)
T ss_dssp             C-----EEEEEEESSSSCCCCEEEEECSSSS---CCHHHHHHHHHHHHCCCTTBCCCCEEEEE-----TTTTEEEEEEEC
T ss_pred             eecCCeEEEEEEEccCCCCeEEEEEEECCCC---CCHHHHHHHHHHHhcCCCCeeeEeeEEec-----CCCCeEEEEEeC
Confidence            46999999999965  578899999997432   23457899999999999999999997742     345578899999


Q ss_pred             ccCCCHHHHhcccCCC----ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEe----cCCCceEEecccc
Q 019481           82 MQKKGLENVHIGEHPA----SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILL----DETFKCNLSDFST  153 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~----~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl----~~~~~~kl~DFGl  153 (340)
                      +. |+|.+++......    ....+++..++.++.||+.||+|||+  ++|+||||||+|||+    +.++.+||+|||+
T Consensus       102 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~--~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~  178 (405)
T 3rgf_A          102 AE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA--NWVLHRDLKPANILVMGEGPERGRVKIADMGF  178 (405)
T ss_dssp             CS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCGGGEEECCSSTTTTCEEECCTTC
T ss_pred             CC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh--CCEeCCCcCHHHeEEecCCCCCCcEEEEECCC
Confidence            96 5888888643210    01239999999999999999999999  889999999999999    6789999999999


Q ss_pred             ceeeccc----CCcceeeccceeeccCccccch-h-hhhHhHhCCcccccccccc
Q 019481          154 AKVSAVE----NADLTALDTSSVSAQSGKTGME-M-KMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       154 a~~~~~~----~~~~~~~gt~~~~~p~~~~~~~-~-~~~~~~s~g~~~~~~~~~~  202 (340)
                      |+.....    ......+||+.|+|||.+.+.. + ...|+|+.|...+.+.++.
T Consensus       179 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~  233 (405)
T 3rgf_A          179 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE  233 (405)
T ss_dssp             CC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSS
T ss_pred             ceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCC
Confidence            9876543    2234567899999997554422 1 1346777666666665544

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=4.4e-37  Score=273.74  Aligned_cols=233  Identities=18%  Similarity=0.199  Sum_probs=157.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++  +++.||+|++.... .....+.+.+|++++++++||||++++++|.       +....+++|||++
T Consensus        47 ~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-------~~~~~~lv~e~~~  117 (309)
T 3p86_A           47 AGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT-------QPPNLSIVTEYLS  117 (309)
T ss_dssp             ECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-------STTCCEEEEECCT
T ss_pred             cCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-------ECCceEEEEecCC
Confidence            589999999986  57789999997533 3445577899999999999999999999765       3346779999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCc--eecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQ--VIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~--iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +|+|.+++.....  ...+++..++.++.||+.||+|||+  ++  |+||||||+|||++.++.+||+|||+++......
T Consensus       118 ~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~--~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~  193 (309)
T 3p86_A          118 RGSLYRLLHKSGA--REQLDERRRLSMAYDVAKGMNYLHN--RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF  193 (309)
T ss_dssp             TCBHHHHHHSTTH--HHHSCHHHHHHHHHHHHHHHHHHHT--SSSCCCCTTCCGGGEEECTTCCEEECCCC---------
T ss_pred             CCcHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHc--CCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc
Confidence            9999999987653  2348999999999999999999999  88  9999999999999999999999999998654432


Q ss_pred             -CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          162 -ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       162 -~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                       ......||+.|+|||.+.+.... ..|+|+.|...+.+.++.                     .||.............
T Consensus       194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~---------------------~Pf~~~~~~~~~~~~~  252 (309)
T 3p86_A          194 LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQ---------------------QPWGNLNPAQVVAAVG  252 (309)
T ss_dssp             --------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCC---------------------CTTTTSCHHHHHHHHH
T ss_pred             cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCC---------------------CCCCCCCHHHHHHHHH
Confidence             23456788888888644332221 235555554444443333                     3322211110000000


Q ss_pred             hhccccccCcCCcc-------ccccccccCCCCchHHHHhhc
Q 019481          240 STITFLSALKITGC-------KSEEGYKNNSSLNPICQIVNQ  274 (340)
Q Consensus       240 ~~~~~~~~~~~p~~-------~~~~~l~~dP~~R~t~~~ll~  274 (340)
                         .....+.+|..       +...||+.||.+|||++++++
T Consensus       253 ---~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~  291 (309)
T 3p86_A          253 ---FKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMD  291 (309)
T ss_dssp             ---HSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---hcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence               01111222222       234789999999999998876

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.1e-37  Score=284.13  Aligned_cols=242  Identities=14%  Similarity=0.010  Sum_probs=166.1

Q ss_pred             CCCcceEEEEEE-----cCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVP-----FPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~-----~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      ..|+||.||+|+     +..+++.||+|+++..........+.+|+.++++++||||++++++|.       +....+++
T Consensus        80 G~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-------~~~~~~lv  152 (367)
T 3l9p_A           80 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL-------QSLPRFIL  152 (367)
T ss_dssp             CCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-------SSSSCEEE
T ss_pred             eeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEe-------cCCCCEEE
Confidence            369999999999     456788999999976555666678899999999999999999999765       33456799


Q ss_pred             eccccCCCHHHHhcccCCC--ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC---ceEEecccc
Q 019481           79 KWLMQKKGLENVHIGEHPA--SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF---KCNLSDFST  153 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~---~~kl~DFGl  153 (340)
                      |||+++|+|.+++......  ....+++..++.++.||++||+|||+  ++|+||||||+|||++.++   .+||+|||+
T Consensus       153 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~--~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~  230 (367)
T 3l9p_A          153 LELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE--NHFIHRDIAARNCLLTCPGPGRVAKIGDFGM  230 (367)
T ss_dssp             EECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEESCSSTTCCEEECCCHH
T ss_pred             EEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh--CCeeCCCCChhhEEEecCCCCceEEECCCcc
Confidence            9999999999999875421  11348999999999999999999999  8899999999999999655   499999999


Q ss_pred             ceeeccc---CCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHH
Q 019481          154 AKVSAVE---NADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNF  229 (340)
Q Consensus       154 a~~~~~~---~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (340)
                      |+.....   .......||+.|+||+.+.+..+. ..|+|+.|...+.+.+                    .+..+|...
T Consensus       231 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt--------------------~g~~pf~~~  290 (367)
T 3l9p_A          231 ARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--------------------LGYMPYPSK  290 (367)
T ss_dssp             HHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT--------------------TSCCSSTTC
T ss_pred             ccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHh--------------------CCCCCCCCC
Confidence            9865432   222344577888888533221111 1244444433333322                    022222211


Q ss_pred             HHHHHHHHhhhhccccccCcCCc-------cccccccccCCCCchHHHHhhcCcce
Q 019481          230 LYLLLIATLLSTITFLSALKITG-------CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~p~-------~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .......    .+.....+..|.       .+...||+.||.+|||+++++++.+.
T Consensus       291 ~~~~~~~----~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~  342 (367)
T 3l9p_A          291 SNQEVLE----FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY  342 (367)
T ss_dssp             CHHHHHH----HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CHHHHHH----HHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            1110000    011111111122       23447899999999999999998877

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=4.1e-37  Score=285.92  Aligned_cols=181  Identities=17%  Similarity=0.110  Sum_probs=143.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc------CCCccccccccccccccccCCcceeeee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI------FHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l------~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      .|+||.||+|++..+++.||+|+++.  .....+.+.+|+++++.+      +|+||++++++|..       ....+++
T Consensus       107 ~G~fg~V~~a~~~~~~~~vAvK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~-------~~~~~lv  177 (429)
T 3kvw_A          107 KGSFGQVVKAYDHKVHQHVALKMVRN--EKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF-------RNHICMT  177 (429)
T ss_dssp             ESSSEEEEEEEETTTTEEEEEEEECS--CHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE-------TTEEEEE
T ss_pred             cCccEEEEEEEECCCCcEEEEEEECC--ccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc-------CCeEEEE
Confidence            58999999999999999999999964  334456678899888887      57799999997753       3467899


Q ss_pred             eccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCc--eEEecccccee
Q 019481           79 KWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFK--CNLSDFSTAKV  156 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~--~kl~DFGla~~  156 (340)
                      +||+. |+|.+++.....   ..+++..++.++.||++||+|||+  ++|+||||||+|||++.++.  +||+|||+|+.
T Consensus       178 ~e~~~-~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~--~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~  251 (429)
T 3kvw_A          178 FELLS-MNLYELIKKNKF---QGFSLPLVRKFAHSILQCLDALHK--NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY  251 (429)
T ss_dssp             ECCCC-CBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHH--HTEECSCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred             EeccC-CCHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHeEEccCCCcceEEeeccccee
Confidence            99996 699999987654   359999999999999999999999  78999999999999999887  99999999976


Q ss_pred             ecccCCcceeeccceeeccCccccchhh-hhHhHhCCcccccccccc
Q 019481          157 SAVENADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       157 ~~~~~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~  202 (340)
                      ...  ...+.+||+.|+|||.+.+..+. ..|+|+.|...+.+.++.
T Consensus       252 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~  296 (429)
T 3kvw_A          252 EHQ--RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGY  296 (429)
T ss_dssp             TTC--CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             cCC--cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCC
Confidence            543  34466889999999644332222 235666555555554443

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=1.1e-36  Score=276.59  Aligned_cols=187  Identities=18%  Similarity=0.053  Sum_probs=144.5

Q ss_pred             CCcceEEEEEE-----cCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeee
Q 019481            5 APSFSVLIHVP-----FPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         5 ~G~fg~V~~~~-----~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      .|+||.||+|+     +..+++.||+|+++........+.+.+|+++++++ +||||++++++|..      +....+++
T Consensus        32 ~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~------~~~~~~iv  105 (359)
T 3vhe_A           32 RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK------PGGPLMVI  105 (359)
T ss_dssp             ECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS------TTSCCEEE
T ss_pred             CCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeec------CCCceEEE
Confidence            58999999998     66778999999998655556667899999999999 79999999997653      23357799


Q ss_pred             eccccCCCHHHHhcccCCCc------------------------------------------------------------
Q 019481           79 KWLMQKKGLENVHIGEHPAS------------------------------------------------------------   98 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~~------------------------------------------------------------   98 (340)
                      |||+++|+|.+++.......                                                            
T Consensus       106 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (359)
T 3vhe_A          106 VEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDL  185 (359)
T ss_dssp             EECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CT
T ss_pred             EEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccch
Confidence            99999999999998764310                                                            


Q ss_pred             -cccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC---cceeeccceeec
Q 019481           99 -VRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA---DLTALDTSSVSA  174 (340)
Q Consensus        99 -~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~---~~~~~gt~~~~~  174 (340)
                       ...+++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.......   .....||+.|+|
T Consensus       186 ~~~~l~~~~~~~~~~ql~~aL~~LH~--~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~a  263 (359)
T 3vhe_A          186 YKDFLTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA  263 (359)
T ss_dssp             TTTCBCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCC
T ss_pred             hccccCHHHHHHHHHHHHHHHHHHHH--CCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEC
Confidence             1128999999999999999999999  8899999999999999999999999999986644322   233467778888


Q ss_pred             cCccccchhh-hhHhHhCCccccccc
Q 019481          175 QSGKTGMEMK-MAQLESGGWRAHDEA  199 (340)
Q Consensus       175 p~~~~~~~~~-~~~~~s~g~~~~~~~  199 (340)
                      |+.+.+..+. ..|+|+.|...+.+.
T Consensus       264 PE~~~~~~~~~~~Di~slG~il~ell  289 (359)
T 3vhe_A          264 PETIFDRVYTIQSDVWSFGVLLWEIF  289 (359)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHT
T ss_pred             hhhhcCCCCCchhhhhhHHHHHHHHH
Confidence            8533222111 235555555554443

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=1.2e-36  Score=275.80  Aligned_cols=187  Identities=16%  Similarity=0.120  Sum_probs=146.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|+++..........+.+|++++++++||||+++++++....  ..+....++++||+. 
T Consensus        21 ~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~~~~~~lv~e~~~-   97 (353)
T 2b9h_A           21 EGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDS--FENFNEVYIIQELMQ-   97 (353)
T ss_dssp             ECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC--STTCCCEEEEECCCS-
T ss_pred             CCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccc--cCccceEEEEEeccC-
Confidence            68999999999999999999999976555556677889999999999999999999765431  223457889999997 


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC--
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA--  162 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~--  162 (340)
                      |+|.+++... .     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.......  
T Consensus        98 ~~L~~~~~~~-~-----~~~~~~~~~~~qi~~~L~~LH~--~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~  169 (353)
T 2b9h_A           98 TDLHRVISTQ-M-----LSDDHIQYFIYQTLRAVKVLHG--SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN  169 (353)
T ss_dssp             EEHHHHHHHC-C-----CCHHHHHHHHHHHHHHHHHHHH--TTEECSCCCGGGEEECTTCCEEECCCTTCEECC------
T ss_pred             ccHHHHHhhc-C-----CCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHeEEcCCCcEEEEecccccccccccccc
Confidence            5999998863 2     8999999999999999999999  7899999999999999999999999999987654221  


Q ss_pred             ---------cceeeccceeeccCccccc-h-hhhhHhHhCCcccccccccc
Q 019481          163 ---------DLTALDTSSVSAQSGKTGM-E-MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 ---------~~~~~gt~~~~~p~~~~~~-~-~~~~~~~s~g~~~~~~~~~~  202 (340)
                               ....+||+.|+||+.+.+. . -...|+|+.|...+.+.++.
T Consensus       170 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~  220 (353)
T 2b9h_A          170 SEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR  220 (353)
T ss_dssp             ----------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             cCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCC
Confidence                     1234678888888643221 1 11346666666665554443

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=7e-37  Score=278.35  Aligned_cols=188  Identities=15%  Similarity=0.109  Sum_probs=137.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc----------hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcce
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP----------LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRY   74 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~----------~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~   74 (340)
                      .|+||.||+|++.. ++.||+|++.....          ....+.+.+|++++++++||||++++++|....  ..+...
T Consensus        32 ~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~~~~  108 (362)
T 3pg1_A           32 SGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFE--EPAMHK  108 (362)
T ss_dssp             EETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECC--TTTCCE
T ss_pred             cCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEecc--CCCcce
Confidence            58999999999865 88899999864221          122477899999999999999999999875321  123446


Q ss_pred             eeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccc
Q 019481           75 CWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTA  154 (340)
Q Consensus        75 ~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla  154 (340)
                      .+++|||++ |+|.+.+.....    .+++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||++
T Consensus       109 ~~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~  181 (362)
T 3pg1_A          109 LYLVTELMR-TDLAQVIHDQRI----VISPQHIQYFMYHILLGLHVLHE--AGVVHRDLHPGNILLADNNDITICDFNLA  181 (362)
T ss_dssp             EEEEEECCS-EEHHHHHHCTTS----CCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCGGGEEECTTCCEEECCTTC-
T ss_pred             EEEEEccCC-CCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHH--CcCEecCCChHHEEEcCCCCEEEEecCcc
Confidence            889999997 689888886553    49999999999999999999999  78999999999999999999999999999


Q ss_pred             eeecccCCcceeeccceeeccCccccchh--hhhHhHhCCcccccccccc
Q 019481          155 KVSAVENADLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       155 ~~~~~~~~~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~~  202 (340)
                      +............||+.|+||+.+.+...  ...|+|+.|...+.+.++.
T Consensus       182 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~  231 (362)
T 3pg1_A          182 REDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK  231 (362)
T ss_dssp             --------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSS
T ss_pred             cccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCC
Confidence            87666555566788999999975443111  1246666666665554443

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=1.1e-36  Score=273.16  Aligned_cols=249  Identities=16%  Similarity=0.102  Sum_probs=155.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHH-HhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLD-SLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|+++..........+.+|+. +++.++||||+++++++.       +....+++|||++
T Consensus        32 ~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~-------~~~~~~lv~e~~~  104 (327)
T 3aln_A           32 RGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALF-------REGDCWICMELMS  104 (327)
T ss_dssp             ECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEE-------CSSEEEEEECCCS
T ss_pred             cCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEE-------eCCceEEEEeecC
Confidence            58999999999999999999999986544555566667776 677889999999999765       3347789999998


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCC-ceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEK-QVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~-~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      + +|.+++..........+++..+..++.|++.||.|||+  + +|+||||||+|||++.++.+||+|||+++.......
T Consensus       105 ~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~--~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~  181 (327)
T 3aln_A          105 T-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA  181 (327)
T ss_dssp             E-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH--HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC------
T ss_pred             C-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc--cCCEeECCCCHHHEEEcCCCCEEEccCCCceecccccc
Confidence            5 88888763110001248999999999999999999999  7 799999999999999999999999999987766555


Q ss_pred             cceeeccceeeccCccc----cchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHH
Q 019481          163 DLTALDTSSVSAQSGKT----GMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIAT  237 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~----~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (340)
                      .....||+.|+||+...    +..+ ...|+|+.|...+.+.++..+|.............+....+.++          
T Consensus       182 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~----------  251 (327)
T 3aln_A          182 KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLS----------  251 (327)
T ss_dssp             ------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCC----------
T ss_pred             cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCC----------
Confidence            55567899999997552    1111 13466666666665554442222111111111000000000000          


Q ss_pred             hhhhccccccCcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          238 LLSTITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       238 ~~~~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                            .......+   ..+...||+.||.+|||++++++|||+.
T Consensus       252 ------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~  290 (327)
T 3aln_A          252 ------NSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFIL  290 (327)
T ss_dssp             ------CCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred             ------CcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHH
Confidence                  00000011   1123367999999999999999999993

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=9.4e-37  Score=280.85  Aligned_cols=189  Identities=16%  Similarity=0.068  Sum_probs=152.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|+++........+.+.+|++++++++||||+++++++...     +....+++|||+++
T Consensus        19 ~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~-----~~~~~~lv~e~~~~   93 (396)
T 4eut_A           19 QGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEET-----TTRHKVLIMEFCPC   93 (396)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT-----TTCCEEEEECCCTT
T ss_pred             cCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccC-----CCCeeEEEEecCCC
Confidence            5899999999999999999999997644444567788999999999999999999976532     33467899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEe----cCCCceEEeccccceeeccc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILL----DETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl----~~~~~~kl~DFGla~~~~~~  160 (340)
                      |+|.+++.....  ...+++..++.++.||+.||+|||+  ++|+||||||+|||+    +.++.+||+|||+|+.....
T Consensus        94 g~L~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~--~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~  169 (396)
T 4eut_A           94 GSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRE--NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD  169 (396)
T ss_dssp             EEHHHHTTSGGG--TTCCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCG
T ss_pred             CCHHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHH--CCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCC
Confidence            999999987543  1338999999999999999999999  789999999999999    77888999999999988776


Q ss_pred             CCcceeeccceeeccCccccc--------h-hhhhHhHhCCcccccccccc
Q 019481          161 NADLTALDTSSVSAQSGKTGM--------E-MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~--------~-~~~~~~~s~g~~~~~~~~~~  202 (340)
                      ......+||+.|+||+.+.+.        . -...|+|+.|...+.+.++.
T Consensus       170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~  220 (396)
T 4eut_A          170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS  220 (396)
T ss_dssp             GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCC
Confidence            656667889999998644321        1 11236666666555554443

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=6.2e-37  Score=268.60  Aligned_cols=242  Identities=16%  Similarity=0.105  Sum_probs=171.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|++.... .....+.+.+|++++++++||||+++++++..     .+....++++||++
T Consensus        16 ~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~~~lv~e~~~   90 (279)
T 2w5a_A           16 TGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID-----RTNTTLYIVMEYCE   90 (279)
T ss_dssp             ECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----GGGTEEEEEEECCT
T ss_pred             CCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEec-----CCCceEEEEEeCCC
Confidence            5899999999999999999999998532 34556778999999999999999999996632     23447889999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCc-----eecCCCCCCcEEecCCCceEEeccccceeec
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQ-----VIYRDFKAPNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~-----iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      +|+|.+++..... ....+++..++.++.|++.||+|||+  ++     |+||||||+||+++.++++||+|||+++...
T Consensus        91 ~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~--~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~  167 (279)
T 2w5a_A           91 GGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHR--RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN  167 (279)
T ss_dssp             TEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHH--HC------CCCCCSGGGEEECSSSCEEECCCCHHHHC-
T ss_pred             CCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHhc--ccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeec
Confidence            9999999976432 01348999999999999999999999  77     9999999999999999999999999998765


Q ss_pred             ccCC-cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHH
Q 019481          159 VENA-DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIA  236 (340)
Q Consensus       159 ~~~~-~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (340)
                      .... .....||+.|++|+...+..+. ..|+|+.|...+.+.++.  .||......              ....     
T Consensus       168 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~--~p~~~~~~~--------------~~~~-----  226 (279)
T 2w5a_A          168 HDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM--PPFTAFSQK--------------ELAG-----  226 (279)
T ss_dssp             --CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSS--CSSCCSSHH--------------HHHH-----
T ss_pred             cccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCC--CCCcccCHH--------------HHHH-----
Confidence            4321 2344678888888644332211 235565555555444433  232211110              0000     


Q ss_pred             HhhhhccccccCcCCcc-------ccccccccCCCCchHHHHhhcCccee
Q 019481          237 TLLSTITFLSALKITGC-------KSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       237 ~~~~~~~~~~~~~~p~~-------~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                       .   +.....+.+|..       +...||+.||.+||+++++++|||+.
T Consensus       227 -~---i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~  272 (279)
T 2w5a_A          227 -K---IREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLIL  272 (279)
T ss_dssp             -H---HHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCC
T ss_pred             -H---HhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhh
Confidence             0   000111122222       23478999999999999999999983

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=2e-37  Score=285.10  Aligned_cols=186  Identities=18%  Similarity=0.162  Sum_probs=141.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++ ||+|.+....     ....+|+++++.++||||++++++|..... ..+..+.+++|||+++
T Consensus        50 ~G~~g~V~~a~~~~~~~-~aikk~~~~~-----~~~~~E~~il~~l~h~niv~l~~~~~~~~~-~~~~~~~~lv~e~~~~  122 (394)
T 4e7w_A           50 NGSFGVVFQAKLVESDE-VAIKKVLQDK-----RFKNRELQIMRIVKHPNVVDLKAFFYSNGD-KKDEVFLNLVLEYVPE  122 (394)
T ss_dssp             EETTEEEEEEEETTTEE-EEEEEEECCT-----TSCCHHHHHHHTCCCTTBCCEEEEEEEESS-SSSCEEEEEEEECCSE
T ss_pred             eCCCeEEEEEEECCCCe-EEEEEEecCc-----chHHHHHHHHHhCCCCCcceEEEEEEecCC-CCCceEEEEEeeccCc
Confidence            58999999999988777 6766664321     122479999999999999999998865432 1345568899999986


Q ss_pred             CCHHHHhcc-cCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEec-CCCceEEeccccceeecccCC
Q 019481           85 KGLENVHIG-EHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLD-ETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        85 gsL~~~l~~-~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~-~~~~~kl~DFGla~~~~~~~~  162 (340)
                       ++.+.+.. ...  ...+++..++.++.||+.||+|||+  ++|+||||||+|||++ .++.+||+|||+|+.......
T Consensus       123 -~l~~~~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~--~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~  197 (394)
T 4e7w_A          123 -TVYRASRHYAKL--KQTMPMLLIKLYMYQLLRSLAYIHS--IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP  197 (394)
T ss_dssp             -EHHHHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCC
T ss_pred             -cHHHHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHH--CCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCC
Confidence             44443332 110  1249999999999999999999999  7899999999999999 799999999999998877776


Q ss_pred             cceeeccceeeccCccccch--hhhhHhHhCCcccccccccc
Q 019481          163 DLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~  202 (340)
                      .....||+.|+||+.+.+..  -...|+|+.|...+.+.++.
T Consensus       198 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~  239 (394)
T 4e7w_A          198 NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ  239 (394)
T ss_dssp             CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            77788999999997554321  11346666666666555544

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=6.1e-37  Score=271.70  Aligned_cols=239  Identities=17%  Similarity=0.130  Sum_probs=165.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||++++++|..       ....++++||+++
T Consensus        29 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~~lv~e~~~~  100 (302)
T 2j7t_A           29 DGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYIVEIEILATCDHPYIVKLLGAYYH-------DGKLWIMIEFCPG  100 (302)
T ss_dssp             CSTTCCEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------C-CEEEEEECCTT
T ss_pred             cCCCeEEEEEEEcCCCcEEEEEEecCCC-HHHHHHHHHHHHHHhcCCCCCEeeeeeeeee-------CCeEEEEEEeCCC
Confidence            6899999999999999999999987432 3345778999999999999999999997753       3467899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc-cCCc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-ENAD  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-~~~~  163 (340)
                      |+|.+++.....    .+++..+..++.||+.||.|||+  ++|+||||||+||+++.++.+||+|||++..... ....
T Consensus       101 ~~l~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  174 (302)
T 2j7t_A          101 GAVDAIMLELDR----GLTEPQIQVVCRQMLEALNFLHS--KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR  174 (302)
T ss_dssp             EEHHHHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-
T ss_pred             CcHHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHhc--CCcccCCCCHHHEEECCCCCEEEEECCCCcccccccccc
Confidence            999999886543    39999999999999999999999  8899999999999999999999999999864322 1223


Q ss_pred             ceeeccceeeccCcccc-----c-hhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHH
Q 019481          164 LTALDTSSVSAQSGKTG-----M-EMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIAT  237 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~-----~-~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (340)
                      ....||+.|++|+....     . --...|+|+.|...+.                     +.++..+|...........
T Consensus       175 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~---------------------l~~g~~p~~~~~~~~~~~~  233 (302)
T 2j7t_A          175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIE---------------------MAQIEPPHHELNPMRVLLK  233 (302)
T ss_dssp             ----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHH---------------------HHHSSCTTTTSCHHHHHHH
T ss_pred             ccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHH---------------------HhcCCCCCccCCHHHHHHH
Confidence            34567888888853310     0 0012344544444443                     3333333322111100000


Q ss_pred             hhhhccc---cccCcCCc---cccccccccCCCCchHHHHhhcCccee
Q 019481          238 LLSTITF---LSALKITG---CKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       238 ~~~~~~~---~~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      . .....   ......+.   .+...||+.||.+|||++++++|||+.
T Consensus       234 ~-~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~  280 (302)
T 2j7t_A          234 I-AKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVS  280 (302)
T ss_dssp             H-HHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTT
T ss_pred             H-hccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHh
Confidence            0 00000   00111111   224478999999999999999999993

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=3.9e-37  Score=281.58  Aligned_cols=159  Identities=21%  Similarity=0.181  Sum_probs=132.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|+++........+.+.+|+++|++++||||+++++++.       +....+++|||+++
T Consensus       124 ~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-------~~~~~~lv~e~~~~  196 (377)
T 3cbl_A          124 RGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCT-------QKQPIYIVMELVQG  196 (377)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEEC-------SSSSCEEEEECCTT
T ss_pred             cCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-------cCCCcEEEEEcCCC
Confidence            58999999999998999999999976544455667899999999999999999999664       33467799999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc-
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD-  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~-  163 (340)
                      |+|.++++..+.    .+++..+..++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+|+........ 
T Consensus       197 g~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~LH~--~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~  270 (377)
T 3cbl_A          197 GDFLTFLRTEGA----RLRVKTLLQMVGDAAAGMEYLES--KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAA  270 (377)
T ss_dssp             CBHHHHHHHHGG----GCCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEEC
T ss_pred             CCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHH--CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceee
Confidence            999999987543    49999999999999999999999  88999999999999999999999999999875432111 


Q ss_pred             --ceeeccceeeccC
Q 019481          164 --LTALDTSSVSAQS  176 (340)
Q Consensus       164 --~~~~gt~~~~~p~  176 (340)
                        ....++..|+|||
T Consensus       271 ~~~~~~~~~~y~aPE  285 (377)
T 3cbl_A          271 SGGLRQVPVKWTAPE  285 (377)
T ss_dssp             CSSCCEEEGGGSCHH
T ss_pred             cCCCCCCCcCcCCHh
Confidence              1122455566664

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=7e-37  Score=270.53  Aligned_cols=184  Identities=17%  Similarity=0.174  Sum_probs=138.9

Q ss_pred             CCcceEEEEEE----cCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVP----FPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~----~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|+||.||+|+    +..+++.||+|++... .....+.+.+|++++++++||||+++++++...     +....+++||
T Consensus        20 ~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~~~lv~e   93 (295)
T 3ugc_A           20 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA-----GRRNLKLIME   93 (295)
T ss_dssp             ECSSEEEEEEEECTTCSSCCEEEEEEEESCC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHH-----HHTSCEEEEE
T ss_pred             ccCCEEEEEEEEecccCCCCcEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-----CCCceEEEEE
Confidence            58999999998    6778999999999743 344557789999999999999999999976432     2335779999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      |+++|+|.+++.....    .+++..+..++.|++.||+|||+  ++|+||||||+|||++.++++||+|||+++.....
T Consensus        94 ~~~~~~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~--~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  167 (295)
T 3ugc_A           94 YLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD  167 (295)
T ss_dssp             CCTTCBHHHHHHHCGG----GCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred             eCCCCCHHHHHHhccc----ccCHHHHHHHHHHHHHHHHHHhc--CCcccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence            9999999999987653    49999999999999999999999  88999999999999999999999999999876543


Q ss_pred             CC----cceeeccceeeccCccccchhh-hhHhHhCCcccccccc
Q 019481          161 NA----DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAE  200 (340)
Q Consensus       161 ~~----~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~  200 (340)
                      ..    .....++..|+||+.+.+..+. ..|+|+.|...+.+.+
T Consensus       168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~  212 (295)
T 3ugc_A          168 KEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT  212 (295)
T ss_dssp             --------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_pred             cceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHh
Confidence            22    1223456667777533221111 2355555555444433

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=3e-36  Score=267.58  Aligned_cols=242  Identities=10%  Similarity=0.085  Sum_probs=173.4

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc---hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP---LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||+|.+..+++.||+|+++....   ....+.+.+|++++++++||||+++++++..     .+....+++|||
T Consensus        15 ~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~~~lv~e~   89 (305)
T 2wtk_C           15 EGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYN-----EEKQKMYMVMEY   89 (305)
T ss_dssp             ECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----C---CEEEEEEC
T ss_pred             cCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEc-----CCCCeEEEEehh
Confidence            58999999999999999999999975221   2345678999999999999999999997632     344577899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++| |.+++.....   ..+++..+..++.||++||+|||+  ++|+||||||+||+++.++.+||+|||+++......
T Consensus        90 ~~~~-l~~~~~~~~~---~~~~~~~~~~~~~qi~~al~~LH~--~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~  163 (305)
T 2wtk_C           90 CVCG-MQEMLDSVPE---KRFPVCQAHGYFCQLIDGLEYLHS--QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA  163 (305)
T ss_dssp             CSEE-HHHHHHHSTT---CSCCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC
T ss_pred             ccCC-HHHHHHhCcc---cccCHHHHHHHHHHHHHHHHHHHH--CCeeecCCCcccEEEcCCCcEEeeccccccccCccc
Confidence            9875 7777766443   359999999999999999999999  889999999999999999999999999998765322


Q ss_pred             ---CcceeeccceeeccCccccchh---hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHH
Q 019481          162 ---ADLTALDTSSVSAQSGKTGMEM---KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLI  235 (340)
Q Consensus       162 ---~~~~~~gt~~~~~p~~~~~~~~---~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (340)
                         ......||+.|++|+...+...   ...|+|+.|...+.+.++.  .||......              ....    
T Consensus       164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~--~p~~~~~~~--------------~~~~----  223 (305)
T 2wtk_C          164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGL--YPFEGDNIY--------------KLFE----  223 (305)
T ss_dssp             SSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSS--CSCCCSSHH--------------HHHH----
T ss_pred             cccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCC--CCCCCchHH--------------HHHH----
Confidence               2234568888998865443221   2356777666666655444  333221110              0000    


Q ss_pred             HHhhhhccccccCcCCc---cccccccccCCCCchHHHHhhcCccee
Q 019481          236 ATLLSTITFLSALKITG---CKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       236 ~~~~~~~~~~~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                        .+....+......+.   .+...||+.||.+|||++++++|||+.
T Consensus       224 --~i~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~  268 (305)
T 2wtk_C          224 --NIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFR  268 (305)
T ss_dssp             --HHHHCCCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHH
T ss_pred             --HHhcCCCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccc
Confidence              000111111111121   234478999999999999999999993

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=2.2e-36  Score=269.65  Aligned_cols=238  Identities=18%  Similarity=0.128  Sum_probs=166.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|++....   ..+.+.+|++++++++||||+++++++..       ....++++||+++
T Consensus        39 ~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~~lv~e~~~~  108 (314)
T 3com_A           39 EGSYGSVYKAIHKETGQIVAIKQVPVES---DLQEIIKEISIMQQCDSPHVVKYYGSYFK-------NTDLWIVMEYCGA  108 (314)
T ss_dssp             ----CEEEEEEETTTCCEEEEEEEETTS---CCHHHHHHHHHHHTCCCTTBCCEEEEEEE-------TTEEEEEEECCTT
T ss_pred             cCCCeEEEEEEECCCCCEEEEEecCchH---HHHHHHHHHHHHHhCCCCCCccEEEEEEe-------CCEEEEEeecCCC
Confidence            6899999999999999999999997532   34668899999999999999999997753       3367899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-Cc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-AD  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~~  163 (340)
                      |+|.+++.....    .+++..+..++.||+.||.|||+  .+|+||||||+||+++.++++||+|||+++...... ..
T Consensus       109 ~~L~~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lH~--~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~  182 (314)
T 3com_A          109 GSVSDIIRLRNK----TLTEDEIATILQSTLKGLEYLHF--MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKR  182 (314)
T ss_dssp             EEHHHHHHHHTC----CCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCB
T ss_pred             CCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHh--CCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcccc
Confidence            999999975433    39999999999999999999999  789999999999999999999999999998765532 23


Q ss_pred             ceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHH--hhh
Q 019481          164 LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIAT--LLS  240 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~  240 (340)
                      ....||+.|++|+...+..+. ..|+|+.|...+.+.++.                     .+|...........  ...
T Consensus       183 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~---------------------~p~~~~~~~~~~~~~~~~~  241 (314)
T 3com_A          183 NTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK---------------------PPYADIHPMRAIFMIPTNP  241 (314)
T ss_dssp             CCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSS---------------------CTTTTSCHHHHHHHHHHSC
T ss_pred             CccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCC---------------------CCCCCCChHHHHHHHhcCC
Confidence            445688888888543322111 234454444444433332                     22221111100000  000


Q ss_pred             hccccccCcCCc---cccccccccCCCCchHHHHhhcCccee
Q 019481          241 TITFLSALKITG---CKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       241 ~~~~~~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ...+......+.   .+...||+.||.+|||++++++|||+.
T Consensus       242 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~  283 (314)
T 3com_A          242 PPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVR  283 (314)
T ss_dssp             CCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHH
T ss_pred             CcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHh
Confidence            000000111111   224478999999999999999999993

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=1.2e-36  Score=277.87  Aligned_cols=143  Identities=19%  Similarity=0.271  Sum_probs=118.9

Q ss_pred             CCcceEEEEEEcC---CCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFP---DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~---~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||+|++.   .++..||+|+++........+.+.+|++++++++||||+++++++.       +....+++|||
T Consensus        55 ~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-------~~~~~~lv~e~  127 (373)
T 2qol_A           55 AGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT-------KSKPVMIVTEY  127 (373)
T ss_dssp             ECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-------SSSSCEEEEEC
T ss_pred             eCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-------eCCceEEEEeC
Confidence            5899999999986   4677899999986555566778999999999999999999999765       33467899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      +++|+|.++++....    .+++..+..++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+++.....
T Consensus       128 ~~~~sL~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~--~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  200 (373)
T 2qol_A          128 MENGSLDSFLRKHDA----QFTVIQLVGMLRGIASGMKYLSD--MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD  200 (373)
T ss_dssp             CTTCBHHHHHHTTTT----CSCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred             CCCCcHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHH--CCeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence            999999999987653    49999999999999999999999  88999999999999999999999999999876543

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=1.8e-35  Score=262.04  Aligned_cols=180  Identities=16%  Similarity=0.149  Sum_probs=141.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhh--cCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEE--IFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~--l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++  +++.||+|++..    ...+.+.+|.+++..  ++||||+++++++...   ..+....+++|||+
T Consensus        18 ~G~~g~V~~~~~--~~~~vavK~~~~----~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~---~~~~~~~~lv~e~~   88 (301)
T 3q4u_A           18 KGRYGEVWRGSW--QGENVAVKIFSS----RDEKSWFRETELYNTVMLRHENILGFIASDMTS---RHSSTQLWLITHYH   88 (301)
T ss_dssp             ECSSEEEEEEEE--TTEEEEEEEECG----GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEE---ETTEEEEEEEECCC
T ss_pred             cCCCcEEEEEEE--CCEEEEEEEecc----ccchhhHHHHHHHHHhhccCcCeeeEEEeeccc---cCCCceeEEehhhc
Confidence            589999999987  588999999963    233455667777666  7999999999976432   22345678999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhh--------cCCCceecCCCCCCcEEecCCCceEEeccccc
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLH--------SSEKQVIYRDFKAPNILLDETFKCNLSDFSTA  154 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH--------~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla  154 (340)
                      ++|+|.++++..      .+++..+..++.||+.||+|||        +  ++|+||||||+|||++.++++||+|||+|
T Consensus        89 ~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~--~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a  160 (301)
T 3q4u_A           89 EMGSLYDYLQLT------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGK--PAIAHRDLKSKNILVKKNGQCCIADLGLA  160 (301)
T ss_dssp             TTCBHHHHHTTC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB--CEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             cCCCHHHHHhhc------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCC--CCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence            999999999653      2899999999999999999999        8  88999999999999999999999999999


Q ss_pred             eeecccCCc-----ceeeccceeeccCccccc------hh-hhhHhHhCCccccccccc
Q 019481          155 KVSAVENAD-----LTALDTSSVSAQSGKTGM------EM-KMAQLESGGWRAHDEAEK  201 (340)
Q Consensus       155 ~~~~~~~~~-----~~~~gt~~~~~p~~~~~~------~~-~~~~~~s~g~~~~~~~~~  201 (340)
                      +........     ....||+.|+|||.+.+.      .+ ...|+|+.|...+.+.++
T Consensus       161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg  219 (301)
T 3q4u_A          161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR  219 (301)
T ss_dssp             EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhh
Confidence            876554322     234789999999754432      11 234677766666665544

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=1.4e-36  Score=272.27  Aligned_cols=188  Identities=18%  Similarity=0.106  Sum_probs=143.8

Q ss_pred             CCcceEEEEEEcC-CCCceEEEEEeeccCc-hhhHHHHHHHHHHhhhc---CCCccccccccccccccccCCcceeeeee
Q 019481            5 APSFSVLIHVPFP-DDRDDVMLKLHELITP-LQLRRDDDGKLDSLEEI---FHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         5 ~G~fg~V~~~~~~-~~~~~vAiK~~~~~~~-~~~~~~~~~E~~~l~~l---~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      .|+||.||+|++. .+++.||+|+++.... ......+.+|+++++.+   +||||+++++++....  ..+....++++
T Consensus        21 ~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~--~~~~~~~~lv~   98 (326)
T 1blx_A           21 EGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR--TDRETKLTLVF   98 (326)
T ss_dssp             EETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE--CSSEEEEEEEE
T ss_pred             ccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc--cCCCceEEEEE
Confidence            5899999999985 6789999999975322 22234567788887777   8999999999775221  12445788999


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      ||++ |+|.+++.....   ..+++..+..++.||+.||+|||+  ++|+||||||+||+++.++.+||+|||+++....
T Consensus        99 e~~~-~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~--~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~  172 (326)
T 1blx_A           99 EHVD-QDLTTYLDKVPE---PGVPTETIKDMMFQLLRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF  172 (326)
T ss_dssp             ECCS-CBHHHHHHHSCT---TCSCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCG
T ss_pred             ecCC-CCHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHHH--CCceeccCCHHHeEEcCCCCEEEecCcccccccC
Confidence            9997 699999987653   349999999999999999999999  8899999999999999999999999999987765


Q ss_pred             cCCcceeeccceeeccCccccchhh-hhHhHhCCcccccccc
Q 019481          160 ENADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAE  200 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~  200 (340)
                      ........||+.|++|+...+..+. ..|+|+.|...+.+.+
T Consensus       173 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  214 (326)
T 1blx_A          173 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR  214 (326)
T ss_dssp             GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             CCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHc
Confidence            5545566788888888643322211 2355555555544433

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.4e-36  Score=276.89  Aligned_cols=185  Identities=16%  Similarity=0.108  Sum_probs=142.6

Q ss_pred             CCcceEEEEEEcCC-------CCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceee
Q 019481            5 APSFSVLIHVPFPD-------DRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCW   76 (340)
Q Consensus         5 ~G~fg~V~~~~~~~-------~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~   76 (340)
                      .|+||.||+|++..       .+..||+|+++........+.+.+|+++++++ +||||++++++|.       +....+
T Consensus        79 ~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~-------~~~~~~  151 (382)
T 3tt0_A           79 EGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-------QDGPLY  151 (382)
T ss_dssp             ECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-------SSSSCE
T ss_pred             cCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeec-------cCCceE
Confidence            58999999999643       33579999998765566678899999999999 8999999999765       334677


Q ss_pred             eeeccccCCCHHHHhcccCCC-----------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCc
Q 019481           77 KNKWLMQKKGLENVHIGEHPA-----------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFK  145 (340)
Q Consensus        77 ~~~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~  145 (340)
                      ++|||+++|+|.+++......           ....+++..++.++.||+.||+|||+  ++|+||||||+|||++.++.
T Consensus       152 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~--~~ivH~Dlkp~NIll~~~~~  229 (382)
T 3tt0_A          152 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNV  229 (382)
T ss_dssp             EEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEECTTCC
T ss_pred             EEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh--CCEecCCCCcceEEEcCCCc
Confidence            999999999999999875421           01349999999999999999999999  88999999999999999999


Q ss_pred             eEEeccccceeecccC---CcceeeccceeeccCccccchhh-hhHhHhCCcccccc
Q 019481          146 CNLSDFSTAKVSAVEN---ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDE  198 (340)
Q Consensus       146 ~kl~DFGla~~~~~~~---~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~  198 (340)
                      +||+|||+|+......   ......||+.|+||+.+.+..+. ..|+|+.|...+.+
T Consensus       230 ~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el  286 (382)
T 3tt0_A          230 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI  286 (382)
T ss_dssp             EEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHH
T ss_pred             EEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHH
Confidence            9999999998765432   22334567778887533222111 23455544444433

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=3e-36  Score=271.54  Aligned_cols=245  Identities=16%  Similarity=0.042  Sum_probs=150.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|++...  ...   .......++.++||||++++++|...   ..+....+++|||+++
T Consensus        39 ~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~---~~e~~~~~~~~~h~~i~~~~~~~~~~---~~~~~~~~lv~e~~~g  110 (336)
T 3fhr_A           39 LGVNGKVLECFHRRTGQKCALKLLYDS--PKA---RQEVDHHWQASGGPHIVCILDVYENM---HHGKRCLLIIMECMEG  110 (336)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEESS--HHH---HHHHHHHHHHTTSTTBCCEEEEEEEE---ETTEEEEEEEEECCTT
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEecCc--HHH---HHHHHHHHHhcCCCChHHHHHHHhhc---cCCCceEEEEEeccCC
Confidence            589999999999999999999999632  211   12223345677999999999988642   2234568899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC---CCceEEeccccceeecccC
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE---TFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~---~~~~kl~DFGla~~~~~~~  161 (340)
                      |+|.+++.....   ..+++..++.++.||+.||+|||+  ++|+||||||+|||++.   ++.+||+|||+++..... 
T Consensus       111 g~L~~~l~~~~~---~~l~~~~~~~i~~ql~~~l~~LH~--~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~-  184 (336)
T 3fhr_A          111 GELFSRIQERGD---QAFTEREAAEIMRDIGTAIQFLHS--HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN-  184 (336)
T ss_dssp             EEHHHHHHTC-C---CCCBHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC----
T ss_pred             CCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEEecCCCceEEEeccccceecccc-
Confidence            999999987653   359999999999999999999999  88999999999999986   455999999999876543 


Q ss_pred             CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      .....+||+.|++|+.+.+..+. ..|+|+.|...+.+.++.  .||...........+..          .    ....
T Consensus       185 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~--~pf~~~~~~~~~~~~~~----------~----~~~~  248 (336)
T 3fhr_A          185 ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGF--PPFYSNTGQAISPGMKR----------R----IRLG  248 (336)
T ss_dssp             -------------------CHHHHHHHHHHHHHHHHHHHHSS--CCC---------------------------------
T ss_pred             ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCC--CCCCCccchhhhhhHHH----------h----hhcc
Confidence            33456789999999755333222 235666555555554433  33322211111000000          0    0000


Q ss_pred             hcccc--ccCcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          241 TITFL--SALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       241 ~~~~~--~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      .....  .....+   ..+...||+.||.+|||++++++|||+.
T Consensus       249 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~  292 (336)
T 3fhr_A          249 QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWIN  292 (336)
T ss_dssp             --CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHH
T ss_pred             ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccc
Confidence            00000  001111   1234478999999999999999999993

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=4.4e-36  Score=276.07  Aligned_cols=185  Identities=17%  Similarity=0.085  Sum_probs=143.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC--------CCccccccccccccccccCCcceee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF--------HPNQVKPSGYWSMNICLTGDRRYCW   76 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~--------hpnIv~l~~~f~~~~~~~~~~~~~~   76 (340)
                      .|+||.||+|++..+++.||+|+++.  .....+.+.+|++++++++        ||||++++++|...   ..+....+
T Consensus        47 ~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~---~~~~~~~~  121 (397)
T 1wak_A           47 WGHFSTVWLSWDIQGKKFVAMKVVKS--AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS---GVNGTHIC  121 (397)
T ss_dssp             ECSSEEEEEEEETTTTEEEEEEEECS--CHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE---ETTEEEEE
T ss_pred             ecCCeeEEEEEecCCCeEEEEEEEec--CCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec---CCCCceEE
Confidence            58999999999999999999999963  3345677889999999996        78899999987632   12445788


Q ss_pred             eeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCC-ceecCCCCCCcEEecCCC-----------
Q 019481           77 KNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEK-QVIYRDFKAPNILLDETF-----------  144 (340)
Q Consensus        77 ~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~-~iiHrDlKp~NILl~~~~-----------  144 (340)
                      ++|||+ +|+|.+.+.....   ..+++..++.++.||+.||+|||+  + +|+||||||+|||++.++           
T Consensus       122 lv~e~~-~~~l~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~lH~--~~givHrDikp~NIll~~~~~~~~~~~~~~~  195 (397)
T 1wak_A          122 MVFEVL-GHHLLKWIIKSNY---QGLPLPCVKKIIQQVLQGLDYLHT--KCRIIHTDIKPENILLSVNEQYIRRLAAEAT  195 (397)
T ss_dssp             EEECCC-CCBHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHHH--TTCEECCCCSGGGEEECCCHHHHHHHHHHHC
T ss_pred             EEEecc-CccHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHHH--hCCEecCCCCHHHeeEeccchhhhhhhhhhH
Confidence            999999 5677776665432   349999999999999999999999  7 799999999999999775           


Q ss_pred             --------------------------------------ceEEeccccceeecccCCcceeeccceeeccCccccchhh-h
Q 019481          145 --------------------------------------KCNLSDFSTAKVSAVENADLTALDTSSVSAQSGKTGMEMK-M  185 (340)
Q Consensus       145 --------------------------------------~~kl~DFGla~~~~~~~~~~~~~gt~~~~~p~~~~~~~~~-~  185 (340)
                                                            .+||+|||+|+.....  ....+||+.|+||+.+.+..+. .
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~  273 (397)
T 1wak_A          196 EWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSLEVLIGSGYNTP  273 (397)
T ss_dssp             ---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC--SCSCCSCGGGCCHHHHHTSCCCTH
T ss_pred             HHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc--CccCCCCCcccCChhhcCCCCCcH
Confidence                                                  7999999999876543  3445789999999644332211 2


Q ss_pred             hHhHhCCcccccccccc
Q 019481          186 AQLESGGWRAHDEAEKA  202 (340)
Q Consensus       186 ~~~~s~g~~~~~~~~~~  202 (340)
                      .|+|+.|...+.+.++.
T Consensus       274 ~DiwslG~il~elltg~  290 (397)
T 1wak_A          274 ADIWSTACMAFELATGD  290 (397)
T ss_dssp             HHHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHHHHhhCC
Confidence            35565555555554433

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=2e-37  Score=274.82  Aligned_cols=247  Identities=17%  Similarity=0.149  Sum_probs=150.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|++..+++.||+|++.........+.+.+|++++++++||||++++++|..       ....++++||++
T Consensus        24 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~~lv~e~~~   96 (303)
T 2vwi_A           24 GSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVV-------KDELWLVMKLLS   96 (303)
T ss_dssp             C---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEES-------SSCEEEEEECCT
T ss_pred             ccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEee-------cCCcEEEehhcc
Confidence            3688999999999999999999999754434456678899999999999999999997753       336779999999


Q ss_pred             CCCHHHHhcccC---CCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           84 KKGLENVHIGEH---PASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        84 ~gsL~~~l~~~~---~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      +|+|.+++....   ......+++..+..++.||+.||+|||+  ++|+||||||+||+++.++.+||+|||+++.....
T Consensus        97 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~  174 (303)
T 2vwi_A           97 GGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK--NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG  174 (303)
T ss_dssp             TCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC--
T ss_pred             CCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh--CCCCCCCCChhhEEEcCCCCEEEEeccchheeccC
Confidence            999999987410   0001348999999999999999999999  88999999999999999999999999998765432


Q ss_pred             C------CcceeeccceeeccCccccch--hhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHH
Q 019481          161 N------ADLTALDTSSVSAQSGKTGME--MKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYL  232 (340)
Q Consensus       161 ~------~~~~~~gt~~~~~p~~~~~~~--~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (340)
                      .      ......||+.|++|+...+..  -...|+|+.|...+.+.++.  .||........             ... 
T Consensus       175 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~--~pf~~~~~~~~-------------~~~-  238 (303)
T 2vwi_A          175 GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGA--APYHKYPPMKV-------------LML-  238 (303)
T ss_dssp             -------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSS--CTTTTSCGGGH-------------HHH-
T ss_pred             CCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCC--CCCccCchhhH-------------HHH-
Confidence            1      123456788888885432211  11235555555555544433  22221111000             000 


Q ss_pred             HHHHHhhhhccccc---c----CcCCc---cccccccccCCCCchHHHHhhcCcce
Q 019481          233 LLIATLLSTITFLS---A----LKITG---CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       233 ~~~~~~~~~~~~~~---~----~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                         ...........   .    ...+.   .+...||+.||.+|||++++++|||+
T Consensus       239 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~  291 (303)
T 2vwi_A          239 ---TLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFF  291 (303)
T ss_dssp             ---HHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC
T ss_pred             ---HhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhh
Confidence               00000000000   0    01111   12346899999999999999999999

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=2.9e-36  Score=264.80  Aligned_cols=180  Identities=17%  Similarity=0.082  Sum_probs=130.9

Q ss_pred             CCcceEEEEEEcCCC---CceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDD---RDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~---~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||+|++..+   +..||+|+.+........+.+.+|+.++++++||||+++++++..        +..+++|||
T Consensus        25 ~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--------~~~~lv~e~   96 (281)
T 1mp8_A           25 EGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE--------NPVWIIMEL   96 (281)
T ss_dssp             ECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS--------SSCEEEEEC
T ss_pred             ecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc--------CccEEEEec
Confidence            589999999998654   456999998765555667789999999999999999999997632        256799999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+++.....    .+++..+..++.|++.||+|||+  ++|+||||||+|||++.++++||+|||+++......
T Consensus        97 ~~~~~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  170 (281)
T 1mp8_A           97 CTLGELRSFLQVRKY----SLDLASLILYAYQLSTALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST  170 (281)
T ss_dssp             CTTEEHHHHHHHTTT----TSCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred             CCCCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHh--CCeecccccHHHEEECCCCCEEECccccccccCccc
Confidence            999999999987653    39999999999999999999999  789999999999999999999999999998765433


Q ss_pred             C--cceeeccceeeccCccccchhh-hhHhHhCCcccccc
Q 019481          162 A--DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDE  198 (340)
Q Consensus       162 ~--~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~  198 (340)
                      .  .....+|+.|+||+...+..+. ..|+|+.|...+.+
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el  210 (281)
T 1mp8_A          171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI  210 (281)
T ss_dssp             --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHH
T ss_pred             ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHH
Confidence            2  2233456677877533221111 23555555555443

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=1.6e-36  Score=276.93  Aligned_cols=185  Identities=16%  Similarity=0.126  Sum_probs=141.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|++... ......+.+.+|+.++++++||||++++++|....... .....+++|||+.
T Consensus        52 ~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-~~~~~~lv~e~~~  130 (371)
T 4exu_A           52 SGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR-NFYDFYLVMPFMQ  130 (371)
T ss_dssp             ECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSST-TCCCCEEEEECCC
T ss_pred             cCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcc-cceeEEEEEcccc
Confidence            589999999999999999999999753 33444677889999999999999999999886543221 1123479999997


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                       |+|.+.+..       .+++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.....  .
T Consensus       131 -~~l~~~~~~-------~~~~~~~~~i~~qi~~aL~~LH~--~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~--~  198 (371)
T 4exu_A          131 -TDLQKIMGM-------EFSEEKIQYLVYQMLKGLKYIHS--AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--M  198 (371)
T ss_dssp             -EEHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEECTTCCEEECSTTCC---------
T ss_pred             -ccHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHH--CCCcCCCcCHHHeEECCCCCEEEEecCcccccccC--c
Confidence             589888742       28999999999999999999999  88999999999999999999999999999865432  3


Q ss_pred             ceeeccceeeccCcccc-ch-hhhhHhHhCCcccccccccc
Q 019481          164 LTALDTSSVSAQSGKTG-ME-MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~-~~-~~~~~~~s~g~~~~~~~~~~  202 (340)
                      ...+||+.|+||+.+.+ .. -...|+|+.|...+.+.++.
T Consensus       199 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~  239 (371)
T 4exu_A          199 TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK  239 (371)
T ss_dssp             -CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             CCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCC
Confidence            34578888888864433 11 11346666666665555444

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=1.1e-35  Score=266.48  Aligned_cols=175  Identities=20%  Similarity=0.201  Sum_probs=139.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++. +++.||+|++...........+.+|++++++++||||+++++++..       ....++++||+++
T Consensus        40 ~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------~~~~~lv~e~~~~  111 (326)
T 3uim_A           40 RGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT-------PTERLLVYPYMAN  111 (326)
T ss_dssp             CCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECC-------SSCCEEEEECCTT
T ss_pred             cCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEec-------CCceEEEEEeccC
Confidence            6899999999864 5788999999764433344468999999999999999999997653       3356799999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCC---ceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEK---QVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      |+|.+++...... ...+++..+..++.|++.||+|||+  +   +|+||||||+|||++.++++||+|||+++......
T Consensus       112 ~~L~~~l~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~--~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  188 (326)
T 3uim_A          112 GSVASCLRERPES-QPPLDWPKRQRIALGSARGLAYLHD--HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD  188 (326)
T ss_dssp             CBHHHHHHCCSTT-CCCCCHHHHHHHHHHHHHHHHHHHH--SSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSS
T ss_pred             CCHHHHHHhcccc-CCCCCHHHHHHHHHHHHHHHHHHHh--CCCCCeEeCCCchhhEEECCCCCEEeccCccccccCccc
Confidence            9999999876431 2349999999999999999999999  6   89999999999999999999999999998775433


Q ss_pred             C--cceeeccceeeccC-----------ccccchhhhhHhHh
Q 019481          162 A--DLTALDTSSVSAQS-----------GKTGMEMKMAQLES  190 (340)
Q Consensus       162 ~--~~~~~gt~~~~~p~-----------~~~~~~~~~~~~~s  190 (340)
                      .  .....||+.|+||+           |+||.|++++++++
T Consensus       189 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  230 (326)
T 3uim_A          189 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT  230 (326)
T ss_dssp             SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHh
Confidence            2  23345899999996           44455555555555

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=5.3e-36  Score=265.55  Aligned_cols=225  Identities=13%  Similarity=0.092  Sum_probs=166.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHh-hhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSL-EEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l-~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|+++.      .....+|++++ +.++||||++++++|..   ...+....+++|||++
T Consensus        28 ~G~~g~V~~~~~~~~~~~vaiK~~~~------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~---~~~~~~~~~lv~e~~~   98 (299)
T 3m2w_A           28 LGINGKVLQIFNKRTQEKFALKMLQD------CPKARREVELHWRASQCPHIVRIVDVYEN---LYAGRKCLLIVMECLD   98 (299)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEEC------SHHHHHHHHHHHHHTTSTTBCCEEEEEEE---EETTEEEEEEEECCCC
T ss_pred             cCCCeEEEEEEEcCCCcEEEEEEecc------cHHHHHHHHHHHHhccCCCchhHHhhhhh---hcCCCceEEEEEeecC
Confidence            58999999999999999999999963      23467889888 55689999999998763   1234557889999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC---CCceEEeccccceeeccc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE---TFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~---~~~~kl~DFGla~~~~~~  160 (340)
                      +|+|.+++.....   ..+++..++.++.||+.||+|||+  ++|+||||||+|||++.   ++.+||+|||+++.... 
T Consensus        99 ~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~--~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-  172 (299)
T 3m2w_A           99 GGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG-  172 (299)
T ss_dssp             SCBHHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTT-
T ss_pred             CCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEEEecCCCCCcEEEecccccccccc-
Confidence            9999999987653   359999999999999999999999  78999999999999998   78999999999987643 


Q ss_pred             CCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHH-----HHHHHHHH
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWN-----NFLYLLLI  235 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~~~  235 (340)
                               ..|....|+||.|+++++++++..++....... .       .......+..+...++     .....+  
T Consensus       173 ---------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~--  233 (299)
T 3m2w_A          173 ---------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-I-------SPGMKTRIRMGQYEFPNPEWSEVSEEV--  233 (299)
T ss_dssp             ---------CGGGGHHHHHHHHHHHHHHHHSSCSCCC---------------CCSCCSSCTTCCSSCHHHHTTSCHHH--
T ss_pred             ---------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh-h-------hHHHHHHHhhccccCCchhcccCCHHH--
Confidence                     225556789999999999888544432211100 0       0011111111111111     011110  


Q ss_pred             HHhhhhccccccCcCCccccccccccCCCCchHHHHhhcCccee
Q 019481          236 ATLLSTITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       236 ~~~~~~~~~~~~~~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                                      ..+...||+.||.+|||++++++|||+.
T Consensus       234 ----------------~~li~~~l~~dP~~Rps~~e~l~hp~~~  261 (299)
T 3m2w_A          234 ----------------KMLIRNLLKTEPTQRMTITEFMNHPWIM  261 (299)
T ss_dssp             ----------------HHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             ----------------HHHHHHHcccChhhCCCHHHHhcChhhc
Confidence                            1233478999999999999999999993

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=5.8e-36  Score=265.41  Aligned_cols=161  Identities=16%  Similarity=0.191  Sum_probs=132.5

Q ss_pred             CCcceEEEEEE----cCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVP----FPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~----~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|+||.||+|+    +..+++.||+|+++........+.+.+|++++++++||||++++++|...     +....+++||
T Consensus        31 ~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~~~lv~e  105 (302)
T 4e5w_A           31 EGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED-----GGNGIKLIME  105 (302)
T ss_dssp             ECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--------CCEEEEEE
T ss_pred             CCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC-----CCceEEEEEE
Confidence            58999999999    67789999999998644445567789999999999999999999977532     3346789999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      |+++|+|.+++.....    .+++..+..++.|++.||+|||+  ++|+||||||+|||++.++++||+|||+++.....
T Consensus       106 ~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  179 (302)
T 4e5w_A          106 FLPSGSLKEYLPKNKN----KINLKQQLKYAVQICKGMDYLGS--RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD  179 (302)
T ss_dssp             CCTTCBHHHHHHHHTT----TCCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred             eCCCCcHHHHHHhccc----cCCHHHHHHHHHHHHHHHHHhhc--CCcccCCCchheEEEcCCCCEEECcccccccccCC
Confidence            9999999999966543    39999999999999999999999  88999999999999999999999999999887654


Q ss_pred             CC----cceeeccceeeccC
Q 019481          161 NA----DLTALDTSSVSAQS  176 (340)
Q Consensus       161 ~~----~~~~~gt~~~~~p~  176 (340)
                      ..    .....||..|++|+
T Consensus       180 ~~~~~~~~~~~~~~~y~aPE  199 (302)
T 4e5w_A          180 KEYYTVKDDRDSPVFWYAPE  199 (302)
T ss_dssp             CCEEECCCCTTCCGGGCCHH
T ss_pred             CcceeccCCCCCCccccCCe
Confidence            32    22335677778775

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=3.7e-36  Score=264.11  Aligned_cols=240  Identities=14%  Similarity=0.116  Sum_probs=174.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCcccccccccccccc---------ccCCccee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNIC---------LTGDRRYC   75 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~---------~~~~~~~~   75 (340)
                      .|+||.||+|++..+++.||+|+++...     +.+.+|++++++++||||++++++|.....         ...+....
T Consensus        21 ~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (284)
T 2a19_B           21 SGGFGQVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCL   95 (284)
T ss_dssp             CSSSCCEEEEEETTTCCEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEEE
T ss_pred             cCCceEEEEEEEcCCCeEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcceE
Confidence            6899999999999999999999997432     346789999999999999999997753211         01224467


Q ss_pred             eeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccce
Q 019481           76 WKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK  155 (340)
Q Consensus        76 ~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~  155 (340)
                      +++|||+++|+|.+++.....   ..+++..+..++.||+.||.|||+  ++|+||||||+||+++.++.+||+|||+++
T Consensus        96 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  170 (284)
T 2a19_B           96 FIQMEFCDKGTLEQWIEKRRG---EKLDKVLALELFEQITKGVDYIHS--KKLINRDLKPSNIFLVDTKQVKIGDFGLVT  170 (284)
T ss_dssp             EEEECCCCSCBHHHHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred             EEEEeccCCCCHHHHHhhccC---CCCCHHHHHHHHHHHHHHHHHHHh--CCeeeccCCHHHEEEcCCCCEEECcchhhe
Confidence            899999999999999976532   349999999999999999999999  889999999999999999999999999999


Q ss_pred             eecccCCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHH
Q 019481          156 VSAVENADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLI  235 (340)
Q Consensus       156 ~~~~~~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (340)
                      ............||+.|++|+...+..+             .  ...+.|+     +|++..++.++..++.........
T Consensus       171 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~-------------~--~~~Di~s-----lG~il~~l~~~~~~~~~~~~~~~~  230 (284)
T 2a19_B          171 SLKNDGKRTRSKGTLRYMSPEQISSQDY-------------G--KEVDLYA-----LGLILAELLHVCDTAFETSKFFTD  230 (284)
T ss_dssp             ESSCCSCCCCCCSCCTTSCHHHHHCSCC-------------C--THHHHHH-----HHHHHHHHHSCCSSHHHHHHHHHH
T ss_pred             eccccccccccCCcccccChhhhccCCC-------------c--chhhhHH-----HHHHHHHHHhcCCcchhHHHHHHH
Confidence            8776655556678888888743322111             1  1222344     555555555555444332221110


Q ss_pred             HHhhhhccccccCcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          236 ATLLSTITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       236 ~~~~~~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      . .  ...  .....+   ..+...||+.||.+|||+++++++++..
T Consensus       231 ~-~--~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~  272 (284)
T 2a19_B          231 L-R--DGI--ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW  272 (284)
T ss_dssp             H-H--TTC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             h-h--ccc--ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            0 0  000  001111   2234578999999999999999998773

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=2.6e-36  Score=271.89  Aligned_cols=173  Identities=12%  Similarity=-0.019  Sum_probs=135.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC-------chhhHHHHHHHHHHhhhcC--------------------------
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT-------PLQLRRDDDGKLDSLEEIF--------------------------   51 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~-------~~~~~~~~~~E~~~l~~l~--------------------------   51 (340)
                      .|+||+||+|++  +++.||+|+++...       .....+.+.+|++++++++                          
T Consensus        30 ~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~  107 (336)
T 2vuw_A           30 EGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSY  107 (336)
T ss_dssp             EETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESSC
T ss_pred             ccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEecCCC
Confidence            589999999998  67999999998632       1223477889999999887                          


Q ss_pred             CCccccccccccccccc------cCCcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhh-cC
Q 019481           52 HPNQVKPSGYWSMNICL------TGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLH-SS  124 (340)
Q Consensus        52 hpnIv~l~~~f~~~~~~------~~~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH-~~  124 (340)
                      ||||++++++|.+....      ..+....+++|||+++|++.+.+.+ ..     +++..++.++.||+.||+||| + 
T Consensus       108 hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~-----~~~~~~~~i~~qi~~aL~~lH~~-  180 (336)
T 2vuw_A          108 PPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KL-----SSLATAKSILHQLTASLAVAEAS-  180 (336)
T ss_dssp             CHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TC-----CCHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             cHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cC-----CCHHHHHHHHHHHHHHHHHHHHh-
Confidence            66666666666531100      1125578899999999987777654 22     899999999999999999999 9 


Q ss_pred             CCceecCCCCCCcEEecCCC--------------------ceEEeccccceeecccCCcceeeccceeeccCccccchhh
Q 019481          125 EKQVIYRDFKAPNILLDETF--------------------KCNLSDFSTAKVSAVENADLTALDTSSVSAQSGKTGMEMK  184 (340)
Q Consensus       125 ~~~iiHrDlKp~NILl~~~~--------------------~~kl~DFGla~~~~~~~~~~~~~gt~~~~~p~~~~~~~~~  184 (340)
                       ++|+||||||+|||++.++                    .+||+|||+|+.....    ..+||+.|+|||.+.+..-.
T Consensus       181 -~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~----~~~gt~~y~aPE~~~g~~~~  255 (336)
T 2vuw_A          181 -LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----IVVFCDVSMDEDLFTGDGDY  255 (336)
T ss_dssp             -HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT----EEECCCCTTCSGGGCCCSSH
T ss_pred             -CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC----cEEEeecccChhhhcCCCcc
Confidence             7799999999999999887                    9999999999877542    45899999999876654434


Q ss_pred             hhHhHhC
Q 019481          185 MAQLESG  191 (340)
Q Consensus       185 ~~~~~s~  191 (340)
                      ..|+|+.
T Consensus       256 ~~Diwsl  262 (336)
T 2vuw_A          256 QFDIYRL  262 (336)
T ss_dssp             HHHHHHH
T ss_pred             ceehhhh
Confidence            4566663

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=4.8e-37  Score=275.71  Aligned_cols=158  Identities=14%  Similarity=0.153  Sum_probs=123.7

Q ss_pred             CCcceEEEEEEcCCCCceE----EEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVPFPDDRDDV----MLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~v----AiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|+||.||+|++..+++.+    |+|.+.........+.+.+|++++++++||||+++++++...        ..++++|
T Consensus        25 ~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--------~~~~v~e   96 (327)
T 3poz_A           25 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS--------TVQLITQ   96 (327)
T ss_dssp             EETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS--------SEEEEEE
T ss_pred             eCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC--------CeEEEEE
Confidence            5899999999988777654    777775444445567899999999999999999999977532        3567899


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      |+++|+|.+++.....    .+++..++.++.||+.||+|||+  ++|+||||||+|||++.++++||+|||+|+.....
T Consensus        97 ~~~~g~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~LH~--~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~  170 (327)
T 3poz_A           97 LMPFGCLLDYVREHKD----NIGSQYLLNWCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE  170 (327)
T ss_dssp             CCTTCBHHHHHHHSTT----SCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred             ecCCCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHhh--CCeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence            9999999999987654    39999999999999999999999  88999999999999999999999999999876543


Q ss_pred             CCcc---eeeccceeeccC
Q 019481          161 NADL---TALDTSSVSAQS  176 (340)
Q Consensus       161 ~~~~---~~~gt~~~~~p~  176 (340)
                      ....   ...||..|+||+
T Consensus       171 ~~~~~~~~~~~t~~y~aPE  189 (327)
T 3poz_A          171 EKEYHAEGGKVPIKWMALE  189 (327)
T ss_dssp             CC-------CCCGGGSCHH
T ss_pred             cccccccCCCccccccChH
Confidence            3222   234566788875

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=1.3e-36  Score=274.98  Aligned_cols=257  Identities=14%  Similarity=0.033  Sum_probs=174.7

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchh----------------hHHHHHHHHHHhhhcCCCcccccccccccccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQ----------------LRRDDDGKLDSLEEIFHPNQVKPSGYWSMNIC   67 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~----------------~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~   67 (340)
                      ..|+||.||+|++  +++.||+|++.......                ..+.+.+|++++++++||||+++++++..   
T Consensus        40 g~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---  114 (348)
T 2pml_X           40 NQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITN---  114 (348)
T ss_dssp             ECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEES---
T ss_pred             cCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEee---
Confidence            3689999999998  88999999997421111                11778999999999999999999997653   


Q ss_pred             ccCCcceeeeeeccccCCCHHHH------hcccCCCccccCCHHHHHHHHHHHHHHHHHhhc-CCCceecCCCCCCcEEe
Q 019481           68 LTGDRRYCWKNKWLMQKKGLENV------HIGEHPASVRQLRRAERLEIVTKMCQDLAFLHS-SEKQVIYRDFKAPNILL  140 (340)
Q Consensus        68 ~~~~~~~~~~~~e~~~~gsL~~~------l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~~~iiHrDlKp~NILl  140 (340)
                          ....+++|||+++|+|.++      +.....   ..+++..++.++.||+.||+|||+ .+  |+||||||+||++
T Consensus       115 ----~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~~--i~H~dl~p~Nil~  185 (348)
T 2pml_X          115 ----YDEVYIIYEYMENDSILKFDEYFFVLDKNYT---CFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILM  185 (348)
T ss_dssp             ----SSEEEEEEECCTTCBSSEESSSEESSCSSSC---CCCCHHHHHHHHHHHHHHHHHHHHTSC--EECCCCCGGGEEE
T ss_pred             ----CCeEEEEEeccCCCcHHHHHHHhhhhhhccc---cCCCHHHHHHHHHHHHHHHHHHhccCC--EeecCCChHhEEE
Confidence                3478899999999999999      665322   349999999999999999999997 55  9999999999999


Q ss_pred             cCCCceEEeccccceeecccCCcceeeccceeeccCccccc-hhh--hhHhHhCCccccccccccccCCCCCCcc-cccC
Q 019481          141 DETFKCNLSDFSTAKVSAVENADLTALDTSSVSAQSGKTGM-EMK--MAQLESGGWRAHDEAEKAFQWPYKSSHL-KNTR  216 (340)
Q Consensus       141 ~~~~~~kl~DFGla~~~~~~~~~~~~~gt~~~~~p~~~~~~-~~~--~~~~~s~g~~~~~~~~~~~~~~~~~~~~-~~~~  216 (340)
                      +.++++||+|||+++..... ......||+.|++|+...+. .+.  ..|+|+.|...+.+.++.  .||..... ....
T Consensus       186 ~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~--~pf~~~~~~~~~~  262 (348)
T 2pml_X          186 DKNGRVKLSDFGESEYMVDK-KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNV--VPFSLKISLVELF  262 (348)
T ss_dssp             CTTSCEEECCCTTCEECBTT-EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSS--CSSCCSSCSHHHH
T ss_pred             cCCCcEEEeccccccccccc-cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCC--CCCCCCCcHHHHH
Confidence            99999999999999876543 33455789999999876654 222  457777777776665544  33322211 0000


Q ss_pred             CCccCCchhHHHHHHHHHHHHhhhhccccccCcCC---ccccccccccCCCCchHHHHhhcCcce
Q 019481          217 PNLKTENETWNNFLYLLLIATLLSTITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       217 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ..+..+...++....... ............+..+   ..+...||+.||.+|||++++++|||+
T Consensus       263 ~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f  326 (348)
T 2pml_X          263 NNIRTKNIEYPLDRNHFL-YPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWL  326 (348)
T ss_dssp             HHHTSCCCCCCCSSSSST-TTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGG
T ss_pred             HHHhccCcCCccchhhhh-ccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccc
Confidence            000000000000000000 0000000000001111   123447899999999999999999999

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=1.5e-36  Score=274.04  Aligned_cols=163  Identities=18%  Similarity=0.186  Sum_probs=133.7

Q ss_pred             CCcceEEEEEEcC-----CCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            5 APSFSVLIHVPFP-----DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         5 ~G~fg~V~~~~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      .|+||.||+|++.     .+++.||+|+++........+.+.+|++++++++||||+++++++.       +....+++|
T Consensus        57 ~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-------~~~~~~lv~  129 (343)
T 1luf_A           57 EGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA-------VGKPMCLLF  129 (343)
T ss_dssp             ECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-------SSSSCEEEE
T ss_pred             ecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-------cCCceEEEE
Confidence            5899999999986     3558899999986555566778999999999999999999999765       344678999


Q ss_pred             ccccCCCHHHHhcccCCC-------------------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEe
Q 019481           80 WLMQKKGLENVHIGEHPA-------------------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILL  140 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl  140 (340)
                      ||+++|+|.+++......                   ....+++..++.++.||++||+|||+  ++|+||||||+|||+
T Consensus       130 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~--~~ivH~Dlkp~NIl~  207 (343)
T 1luf_A          130 EYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE--RKFVHRDLATRNCLV  207 (343)
T ss_dssp             ECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEE
T ss_pred             ecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCcceEEE
Confidence            999999999999874310                   01359999999999999999999999  889999999999999


Q ss_pred             cCCCceEEeccccceeecccC---CcceeeccceeeccC
Q 019481          141 DETFKCNLSDFSTAKVSAVEN---ADLTALDTSSVSAQS  176 (340)
Q Consensus       141 ~~~~~~kl~DFGla~~~~~~~---~~~~~~gt~~~~~p~  176 (340)
                      +.++.+||+|||+++......   ......||+.|++|+
T Consensus       208 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE  246 (343)
T 1luf_A          208 GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPE  246 (343)
T ss_dssp             CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHH
T ss_pred             CCCCeEEEeecCCCcccccCccccccCCCcccceecChh
Confidence            999999999999998664432   122345677788875

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=7.9e-36  Score=265.90  Aligned_cols=186  Identities=17%  Similarity=0.125  Sum_probs=143.3

Q ss_pred             CCcceEEEEEEc-----CCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            5 APSFSVLIHVPF-----PDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         5 ~G~fg~V~~~~~-----~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      .|+||.||+|++     ..+++.||+|+++........+.+.+|++++++++||||++++++|.       +....++++
T Consensus        33 ~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-------~~~~~~lv~  105 (314)
T 2ivs_A           33 EGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACS-------QDGPLLLIV  105 (314)
T ss_dssp             ECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-------SSSSCEEEE
T ss_pred             ccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEe-------cCCceEEEE
Confidence            589999999987     34568899999986555566788999999999999999999999765       344678999


Q ss_pred             ccccCCCHHHHhcccCCC-------------------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEe
Q 019481           80 WLMQKKGLENVHIGEHPA-------------------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILL  140 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl  140 (340)
                      ||+++|+|.+++......                   ....+++..++.++.||++||+|||+  ++|+||||||+|||+
T Consensus       106 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~ivH~dikp~NIli  183 (314)
T 2ivs_A          106 EYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE--MKLVHRDLAARNILV  183 (314)
T ss_dssp             ECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEE
T ss_pred             eecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH--CCCcccccchheEEE
Confidence            999999999999875421                   01248999999999999999999999  889999999999999


Q ss_pred             cCCCceEEeccccceeecccCC---cceeeccceeeccCccccchhh-hhHhHhCCccccccc
Q 019481          141 DETFKCNLSDFSTAKVSAVENA---DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEA  199 (340)
Q Consensus       141 ~~~~~~kl~DFGla~~~~~~~~---~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~  199 (340)
                      +.++++||+|||+++.......   .....+|+.|++|+...+..+. ..|+|+.|...+.+.
T Consensus       184 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~  246 (314)
T 2ivs_A          184 AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV  246 (314)
T ss_dssp             ETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHH
Confidence            9999999999999987754332   2233456677777533221111 235555555544443

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=8.8e-37  Score=273.75  Aligned_cols=180  Identities=13%  Similarity=0.076  Sum_probs=136.2

Q ss_pred             CCcceEEEEEEcCCCCce----EEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVPFPDDRDD----VMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~----vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|+||.||+|++..+++.    ||+|.+.........+.+.+|+.++++++||||+++++++..        ...++++|
T Consensus        23 ~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--------~~~~~v~e   94 (325)
T 3kex_A           23 SGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG--------SSLQLVTQ   94 (325)
T ss_dssp             CCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB--------SSEEEEEE
T ss_pred             ecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--------CccEEEEE
Confidence            689999999999888776    677776543333344567889999999999999999996642        25778999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      |+++|+|.+++.....    .+++..+..++.||++||+|||+  ++|+||||||+|||++.++++||+|||+|+.....
T Consensus        95 ~~~~~~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~--~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~  168 (325)
T 3kex_A           95 YLPLGSLLDHVRQHRG----ALGPQLLLNWGVQIAKGMYYLEE--HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD  168 (325)
T ss_dssp             CCTTCBSHHHHHSSGG----GSCTTHHHHHHHHHHHHHHHHHH--TTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred             eCCCCCHHHHHHHccc----cCCHHHHHHHHHHHHHHHHHHHh--CCCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence            9999999999987643    49999999999999999999999  78999999999999999999999999999876543


Q ss_pred             CC---cceeeccceeeccCccccchhh-hhHhHhCCcccccc
Q 019481          161 NA---DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDE  198 (340)
Q Consensus       161 ~~---~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~  198 (340)
                      ..   .....||..|++|+...+..+. ..|+|+.|...+.+
T Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el  210 (325)
T 3kex_A          169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWEL  210 (325)
T ss_dssp             TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHH
Confidence            32   2234566677777533211111 23555544444443

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.5e-36  Score=272.17  Aligned_cols=245  Identities=16%  Similarity=0.119  Sum_probs=166.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|+++...  ...+.+.+|+++++++ +||||++++++|...... ......+++|||++
T Consensus        34 ~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~-~~~~~~~lv~e~~~  110 (326)
T 2x7f_A           34 NGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP-GMDDQLWLVMEFCG  110 (326)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEECCS--STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC---CCCCEEEEEEECCT
T ss_pred             cCCCEEEEEEEECCCCCeEEEEEEecCc--ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc-cccceEEEEEEcCC
Confidence            5889999999999999999999997532  2346788999999999 799999999988643211 12457889999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-C
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-A  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-~  162 (340)
                      +|+|.+++.....   ..+++..++.++.||+.||+|||+  ++|+||||||+|||++.++++||+|||++....... .
T Consensus       111 ~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~--~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~  185 (326)
T 2x7f_A          111 AGSVTDLIKNTKG---NTLKEEWIAYICREILRGLSHLHQ--HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR  185 (326)
T ss_dssp             TEEHHHHHHHSGG---GCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCSGGGEEECTTCCEEECCCTTTC--------
T ss_pred             CCcHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHHH--CCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCccc
Confidence            9999999987542   359999999999999999999999  889999999999999999999999999998765432 2


Q ss_pred             cceeeccceeeccCccccc------hhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHH
Q 019481          163 DLTALDTSSVSAQSGKTGM------EMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIA  236 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~------~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (340)
                      .....||+.|+||+...+.      --...|+|+.|...+.+                     .++..+|..........
T Consensus       186 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l---------------------~~g~~p~~~~~~~~~~~  244 (326)
T 2x7f_A          186 RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM---------------------AEGAPPLCDMHPMRALF  244 (326)
T ss_dssp             -----CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHH---------------------HHSSCTTTTSCHHHHHH
T ss_pred             cccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHH---------------------HhCCCCCCCCcHHHHHH
Confidence            3445688888888543210      00123444444444443                     33333332211110000


Q ss_pred             Hhhhhcccc--ccCcCCc---cccccccccCCCCchHHHHhhcCccee
Q 019481          237 TLLSTITFL--SALKITG---CKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       237 ~~~~~~~~~--~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                       ........  .....+.   .+...||..||.+||+++++++|||+.
T Consensus       245 -~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~  291 (326)
T 2x7f_A          245 -LIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIR  291 (326)
T ss_dssp             -HHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHH
T ss_pred             -HhhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHh
Confidence             00000000  0011111   234478999999999999999999993

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=2.5e-36  Score=263.43  Aligned_cols=156  Identities=17%  Similarity=0.172  Sum_probs=129.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++.. ++.||+|++....  ...+.+.+|++++++++||||+++++++.       +....+++|||+++
T Consensus        20 ~G~~g~V~~~~~~~-~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~~~~   89 (269)
T 4hcu_A           20 SGQFGLVHLGYWLN-KDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCL-------EQAPICLVFEFMEH   89 (269)
T ss_dssp             ECSSCEEEEEEETT-TEEEEEEEECTTS--BCHHHHHHHHHHHHTCCCTTBCCEEEEEC-------SSSSEEEEEECCTT
T ss_pred             CCCccEEEEEEecC-CCeEEEEEecccc--cCHHHHHHHHHHHHhCCCCCEeeEEEEEe-------cCCceEEEEEeCCC
Confidence            58999999999874 6679999997532  23466899999999999999999999765       33467899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC--C
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN--A  162 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--~  162 (340)
                      |+|.+++.....    .+++..+..++.|+++||+|||+  ++|+||||||+||+++.++.+||+|||+++......  .
T Consensus        90 ~~L~~~l~~~~~----~~~~~~~~~i~~~i~~~l~~lH~--~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  163 (269)
T 4hcu_A           90 GCLSDYLRTQRG----LFAAETLLGMCLDVCEGMAYLEE--ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS  163 (269)
T ss_dssp             CBHHHHHHTTTT----CCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS
T ss_pred             CcHHHHHHhcCc----ccCHHHHHHHHHHHHHHHHHHHh--CCeecCCcchheEEEcCCCCEEecccccccccccccccc
Confidence            999999977554    38999999999999999999999  889999999999999999999999999998654422  1


Q ss_pred             cceeeccceeeccC
Q 019481          163 DLTALDTSSVSAQS  176 (340)
Q Consensus       163 ~~~~~gt~~~~~p~  176 (340)
                      .....+|+.|+||+
T Consensus       164 ~~~~~~~~~y~aPE  177 (269)
T 4hcu_A          164 STGTKFPVKWASPE  177 (269)
T ss_dssp             TTSTTCCGGGCCHH
T ss_pred             ccCcccccccCCHH
Confidence            22334566677775

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.3e-36  Score=269.83  Aligned_cols=189  Identities=16%  Similarity=0.126  Sum_probs=139.4

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCcccccccccccccc-------ccCCcceee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNIC-------LTGDRRYCW   76 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~-------~~~~~~~~~   76 (340)
                      ..|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++.....       ...+....+
T Consensus        20 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (320)
T 2i6l_A           20 GCGGNGLVFSAVDNDCDKRVAIKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVY   98 (320)
T ss_dssp             C-----CEEEEEETTTTEEEEEEEEECCS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEE
T ss_pred             ccCCCeEEEEEEECCCCeEEEEEEEecCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCcee
Confidence            36899999999999999999999987543 4556778999999999999999999997754321       123445788


Q ss_pred             eeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEec-CCCceEEeccccce
Q 019481           77 KNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLD-ETFKCNLSDFSTAK  155 (340)
Q Consensus        77 ~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~-~~~~~kl~DFGla~  155 (340)
                      +++||++ |+|.+++... .     +++..++.++.||+.||+|||+  ++|+||||||+|||++ .++.+||+|||+++
T Consensus        99 lv~e~~~-~~L~~~~~~~-~-----~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~  169 (320)
T 2i6l_A           99 IVQEYME-TDLANVLEQG-P-----LLEEHARLFMYQLLRGLKYIHS--ANVLHRDLKPANLFINTEDLVLKIGDFGLAR  169 (320)
T ss_dssp             EEEECCS-EEHHHHHTTC-C-----CCHHHHHHHHHHHHHHHHHHHH--TTCBCCCCSGGGEEEETTTTEEEECCCTTCB
T ss_pred             EEeeccC-CCHHHHhhcC-C-----ccHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHEEEcCCCCeEEEccCcccc
Confidence            9999997 6999999753 2     8999999999999999999999  8899999999999997 56799999999998


Q ss_pred             eecccC----CcceeeccceeeccCccccchh--hhhHhHhCCcccccccccc
Q 019481          156 VSAVEN----ADLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       156 ~~~~~~----~~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~~  202 (340)
                      ......    ......||+.|++|+...+.+.  ...|+|+.|...+.+.++.
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~  222 (320)
T 2i6l_A          170 IMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK  222 (320)
T ss_dssp             CC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             ccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCC
Confidence            764321    1233456777888864432111  1236666666665554443

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=2.4e-35  Score=259.57  Aligned_cols=182  Identities=15%  Similarity=0.131  Sum_probs=145.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhh------HHHHHHHHHHhhhcCCCccccccccccccccccCCcceeee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQL------RRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWK   77 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~------~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~   77 (340)
                      ..|+||.||+|++..+++.||+|++........      .+.+.+|++++++++||||++++++|...       .  ++
T Consensus        28 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-------~--~l   98 (287)
T 4f0f_A           28 GKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP-------P--RM   98 (287)
T ss_dssp             CCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT-------T--EE
T ss_pred             ccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC-------C--eE
Confidence            368999999999999999999999875322111      16789999999999999999999976532       2  48


Q ss_pred             eeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCc--eecCCCCCCcEEecCCCc-----eEEec
Q 019481           78 NKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQ--VIYRDFKAPNILLDETFK-----CNLSD  150 (340)
Q Consensus        78 ~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~--iiHrDlKp~NILl~~~~~-----~kl~D  150 (340)
                      +|||+++|+|.+.+.....    .+++..+..++.|++.||+|||+  ++  |+||||||+|||++.++.     +||+|
T Consensus        99 v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~l~~~l~~lH~--~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D  172 (287)
T 4f0f_A           99 VMEFVPCGDLYHRLLDKAH----PIKWSVKLRLMLDIALGIEYMQN--QNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD  172 (287)
T ss_dssp             EEECCTTCBHHHHHHCTTS----CCCHHHHHHHHHHHHHHHHHHHT--SSSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred             EEEecCCCCHHHHHhcccC----CccHHHHHHHHHHHHHHHHHHHh--CCCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence            9999999999998877654    49999999999999999999999  88  999999999999988776     99999


Q ss_pred             cccceeecccCCcceeeccceeeccCccccch---hhhhHhHhCCcccccccccc
Q 019481          151 FSTAKVSAVENADLTALDTSSVSAQSGKTGME---MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       151 FGla~~~~~~~~~~~~~gt~~~~~p~~~~~~~---~~~~~~~s~g~~~~~~~~~~  202 (340)
                      ||+++....  ......||+.|++|+.+.+..   -...|+|+.|...+.+.++.
T Consensus       173 fg~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~  225 (287)
T 4f0f_A          173 FGLSQQSVH--SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE  225 (287)
T ss_dssp             CTTCBCCSS--CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSS
T ss_pred             CCccccccc--cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCC
Confidence            999975433  334567899999997652211   12357777666666665544

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=1.8e-36  Score=271.86  Aligned_cols=163  Identities=20%  Similarity=0.250  Sum_probs=129.6

Q ss_pred             CCcceEEEEEEcCCCCceE--EEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRDDV--MLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~v--AiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||+|++..+++.+  |+|.++........+.+.+|+++++++ +||||++++++|..       ....+++|||
T Consensus        35 ~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-------~~~~~lv~e~  107 (327)
T 1fvr_A           35 EGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-------RGYLYLAIEY  107 (327)
T ss_dssp             CGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEE-------TTEEEEEECC
T ss_pred             cCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeee-------CCceEEEEec
Confidence            6899999999998888765  999987644445566789999999999 89999999997753       3478899999


Q ss_pred             ccCCCHHHHhcccCC-----------CccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEec
Q 019481           82 MQKKGLENVHIGEHP-----------ASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSD  150 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~D  150 (340)
                      +++|+|.+++.....           .....+++..++.++.||++||+|||+  ++|+||||||+|||++.++.+||+|
T Consensus       108 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~--~~ivH~dlkp~NIl~~~~~~~kL~D  185 (327)
T 1fvr_A          108 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ--KQFIHRDLAARNILVGENYVAKIAD  185 (327)
T ss_dssp             CTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEECGGGCEEECC
T ss_pred             CCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh--CCccCCCCccceEEEcCCCeEEEcc
Confidence            999999999987640           001249999999999999999999999  8899999999999999999999999


Q ss_pred             cccceeecccCCcceeeccceeeccC
Q 019481          151 FSTAKVSAVENADLTALDTSSVSAQS  176 (340)
Q Consensus       151 FGla~~~~~~~~~~~~~gt~~~~~p~  176 (340)
                      ||+++............+++.|++|+
T Consensus       186 fg~~~~~~~~~~~~~~~~~~~y~aPE  211 (327)
T 1fvr_A          186 FGLSRGQEVYVKKTMGRLPVRWMAIE  211 (327)
T ss_dssp             TTCEESSCEECCC----CCTTTCCHH
T ss_pred             cCcCccccccccccCCCCCccccChh
Confidence            99998554433333445566677774

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.2e-36  Score=263.95  Aligned_cols=236  Identities=13%  Similarity=0.089  Sum_probs=165.6

Q ss_pred             CCcceEEEEEEcC--CCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFP--DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~--~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++.  .+++.||+|+++........+.+.+|++++++++||||+++++++..        ...++++||+
T Consensus        20 ~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--------~~~~lv~e~~   91 (287)
T 1u59_A           20 CGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA--------EALMLVMEMA   91 (287)
T ss_dssp             CCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES--------SSEEEEEECC
T ss_pred             ccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC--------CCcEEEEEeC
Confidence            6899999999854  46788999999865555667889999999999999999999997632        2477999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      ++|+|.+++.....    .+++..+..++.||++||+|||+  ++|+||||||+||+++.++.+||+|||+++.......
T Consensus        92 ~~~~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~  165 (287)
T 1u59_A           92 GGGPLHKFLVGKRE----EIPVSNVAELLHQVSMGMKYLEE--KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS  165 (287)
T ss_dssp             TTEEHHHHHTTCTT----TSCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred             CCCCHHHHHHhCCc----cCCHHHHHHHHHHHHHHHHHHHH--CCEeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence            99999999976543    49999999999999999999999  8899999999999999999999999999987754332


Q ss_pred             c----ceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHH
Q 019481          163 D----LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIAT  237 (340)
Q Consensus       163 ~----~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (340)
                      .    ....||+.|++|+...+..+. ..|+|+.|...+.+.+                    .+..||.......... 
T Consensus       166 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt--------------------~g~~p~~~~~~~~~~~-  224 (287)
T 1u59_A          166 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS--------------------YGQKPYKKMKGPEVMA-  224 (287)
T ss_dssp             EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHT--------------------TSCCTTTTCCTHHHHH-
T ss_pred             eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHc--------------------CCCCCcccCCHHHHHH-
Confidence            1    222456667777433211111 2345544444443332                    0222222110000000 


Q ss_pred             hhhhccccccCcCCcc-------ccccccccCCCCchHHHHhhcCcce
Q 019481          238 LLSTITFLSALKITGC-------KSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       238 ~~~~~~~~~~~~~p~~-------~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .   +.....+..|..       +...|++.||.+||++++++++.+-
T Consensus       225 ~---i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~  269 (287)
T 1u59_A          225 F---IEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA  269 (287)
T ss_dssp             H---HHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             H---HhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            0   001111222222       2347899999999999999887654

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=1.8e-36  Score=271.30  Aligned_cols=250  Identities=12%  Similarity=0.061  Sum_probs=151.7

Q ss_pred             CCcceEEEEEEcCCCCc---eEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVPFPDDRD---DVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~---~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|+||.||+|++..+++   .||+|+++... .....+.+.+|++++++++||||+++++++...... ......++++|
T Consensus        33 ~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-~~~~~~~~v~e  111 (323)
T 3qup_A           33 KGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK-GRLPIPMVILP  111 (323)
T ss_dssp             EETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--------CEEEEEE
T ss_pred             ccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc-cCCCccEEEEE
Confidence            58999999999987765   79999997532 334567799999999999999999999987643221 11123479999


Q ss_pred             cccCCCHHHHhcccCCC-ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           81 LMQKKGLENVHIGEHPA-SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      |+++|+|.+++...... ....+++..+..++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+|+....
T Consensus       112 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~--~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~  189 (323)
T 3qup_A          112 FMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS--RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYS  189 (323)
T ss_dssp             CCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred             eccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc--CCcccCCCCcceEEEcCCCCEEEeeccccccccc
Confidence            99999999999754321 01248999999999999999999999  8899999999999999999999999999987654


Q ss_pred             cCCc---ceeeccceeeccCccccchhh-hhHhHhCCcccccccc-ccccCCCCCCcccccCCCccCCchhHHHHHHHHH
Q 019481          160 ENAD---LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAE-KAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLL  234 (340)
Q Consensus       160 ~~~~---~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (340)
                      ....   ....+++.|++|+...+..+. ..|+|+.|...+.+.+ +.  .||.......+              .    
T Consensus       190 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~--~p~~~~~~~~~--------------~----  249 (323)
T 3qup_A          190 GDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQ--TPYAGIENAEI--------------Y----  249 (323)
T ss_dssp             -----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC--CTTTTCCGGGH--------------H----
T ss_pred             cccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCC--CCccccChHHH--------------H----
Confidence            3322   223455667777533221111 2355555554444333 22  22222111000              0    


Q ss_pred             HHHhhhhccccccCcCCc---cccccccccCCCCchH-------HHHhhcCcce
Q 019481          235 IATLLSTITFLSALKITG---CKSEEGYKNNSSLNPI-------CQIVNQHPFY  278 (340)
Q Consensus       235 ~~~~~~~~~~~~~~~~p~---~~~~~~l~~dP~~R~t-------~~~ll~hp~~  278 (340)
                       ............+..+.   .+...||+.||.+|||       .+++++|||+
T Consensus       250 -~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~  302 (323)
T 3qup_A          250 -NYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSV  302 (323)
T ss_dssp             -HHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred             -HHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhh
Confidence             00000001111112222   2344789999999999       7788999999

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=5.3e-36  Score=263.24  Aligned_cols=157  Identities=18%  Similarity=0.204  Sum_probs=127.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|.+. ++..||+|+++...  ...+.+.+|++++++++||||++++++|.       +....+++|||++
T Consensus        33 g~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~~~  102 (283)
T 3gen_A           33 GTGQFGVVKYGKWR-GQYDVAIKMIKEGS--MSEDEFIEEAKVMMNLSHEKLVQLYGVCT-------KQRPIFIITEYMA  102 (283)
T ss_dssp             C---CEEEEEEEET-TTEEEEEEEECTTS--BCHHHHHHHHHHHHTCCCTTBCCEEEEEC-------SSSSEEEEECCCT
T ss_pred             CCCCCceEEEEEEc-CCCeEEEEEecCCC--CCHHHHHHHHHHHhcCCCCCEeeEEEEEe-------cCCCeEEEEeccC
Confidence            36899999999886 56779999997532  23466899999999999999999999764       3446789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC--
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN--  161 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--  161 (340)
                      +|+|.+++.....    .+++..+..++.|++.||+|||+  ++|+||||||+||+++.++++||+|||+++......  
T Consensus       103 ~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~lH~--~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~  176 (283)
T 3gen_A          103 NGCLLNYLREMRH----RFQTQQLLEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT  176 (283)
T ss_dssp             TCBHHHHHHCGGG----CCCHHHHHHHHHHHHHHHHHHHH--TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH
T ss_pred             CCcHHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHH--CCccCCCCccceEEEcCCCCEEEccccccccccccccc
Confidence            9999999987443    39999999999999999999999  889999999999999999999999999998654421  


Q ss_pred             CcceeeccceeeccC
Q 019481          162 ADLTALDTSSVSAQS  176 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~  176 (340)
                      ......+|+.|++|+
T Consensus       177 ~~~~~~~~~~y~aPE  191 (283)
T 3gen_A          177 SSVGSKFPVRWSPPE  191 (283)
T ss_dssp             STTSTTSCGGGCCHH
T ss_pred             cccCCccCcccCCHH
Confidence            122234566677774

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=4.4e-36  Score=261.68  Aligned_cols=156  Identities=22%  Similarity=0.220  Sum_probs=128.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|.+. ++..||+|+++...  ...+.+.+|++++++++||||+++++++.       +....+++|||+++
T Consensus        18 ~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~~~~   87 (268)
T 3sxs_A           18 SGQFGVVKLGKWK-GQYDVAVKMIKEGS--MSEDEFFQEAQTMMKLSHPKLVKFYGVCS-------KEYPIYIVTEYISN   87 (268)
T ss_dssp             EETTEEEEEEEET-TTEEEEEEEECBTT--BCHHHHHHHHHHHHHCCCTTBCCEEEEEC-------SSSSEEEEEECCTT
T ss_pred             cCCCceEEEEEec-CceeEEEEEeccCC--CcHHHHHHHHHHHHhCCCCCEeeEEEEEc-------cCCceEEEEEccCC
Confidence            5899999999876 56679999997432  23466899999999999999999999664       44467899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc-
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD-  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~-  163 (340)
                      |+|.+++.....    .+++..+..++.|+++||+|||+  ++|+||||||+||+++.++.+||+|||+++........ 
T Consensus        88 ~~L~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~lH~--~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~  161 (268)
T 3sxs_A           88 GCLLNYLRSHGK----GLEPSQLLEMCYDVCEGMAFLES--HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVS  161 (268)
T ss_dssp             CBHHHHHHHHGG----GCCHHHHHHHHHHHHHHHHHHHH--TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEE
T ss_pred             CcHHHHHHHcCC----CCCHHHHHHHHHHHHHHHHHHHH--CCeecCCcCcceEEECCCCCEEEccCccceecchhhhhc
Confidence            999999987643    49999999999999999999999  88999999999999999999999999999876543221 


Q ss_pred             -ceeeccceeeccC
Q 019481          164 -LTALDTSSVSAQS  176 (340)
Q Consensus       164 -~~~~gt~~~~~p~  176 (340)
                       ....+|+.|++|+
T Consensus       162 ~~~~~~~~~y~aPE  175 (268)
T 3sxs_A          162 SVGTKFPVKWSAPE  175 (268)
T ss_dssp             CCSCCCCGGGCCHH
T ss_pred             ccCCCcCcccCCHH
Confidence             1223455577664

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=5.8e-35  Score=261.42  Aligned_cols=162  Identities=23%  Similarity=0.258  Sum_probs=134.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++.       +....++++||++
T Consensus        48 g~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------~~~~~~lv~e~~~  118 (321)
T 2qkw_B           48 GHGVFGKVYKGVLR-DGAKVALKRRTPES-SQGIEEFETEIETLSFCRHPHLVSLIGFCD-------ERNEMILIYKYME  118 (321)
T ss_dssp             CBCSSSEEEEEECT-TCCEEEEEECCSCC-SSHHHHHHHHHHGGGSCCCTTBCCEEEECC-------CTTCCEEEEECCT
T ss_pred             ecCCCeeEEEEEEC-CCCEEEEEEecccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-------CCCeEEEEEEcCC
Confidence            36899999999974 67889999987533 344677899999999999999999999764       3446779999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC--
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN--  161 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--  161 (340)
                      +|+|.+++...... ...+++..+..++.||+.||+|||+  ++|+||||||+||+++.++.+||+|||+++......  
T Consensus       119 ~~~L~~~l~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  195 (321)
T 2qkw_B          119 NGNLKRHLYGSDLP-TMSMSWEQRLEICIGAARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQT  195 (321)
T ss_dssp             TCBTGGGSSSSCCC-SCCCCHHHHHHHHHHHHHHHHHHHH--TTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCC
T ss_pred             CCcHHHHHhccCCC-ccccCHHHHHHHHHHHHHHHHHhcC--CCeecCCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence            99999999765421 2348999999999999999999999  889999999999999999999999999998754322  


Q ss_pred             -CcceeeccceeeccCc
Q 019481          162 -ADLTALDTSSVSAQSG  177 (340)
Q Consensus       162 -~~~~~~gt~~~~~p~~  177 (340)
                       ......||+.|+||+.
T Consensus       196 ~~~~~~~gt~~y~aPE~  212 (321)
T 2qkw_B          196 HLSTVVKGTLGYIDPEY  212 (321)
T ss_dssp             CCBCCCEEETTTCCHHH
T ss_pred             ccccccCCCccccCHHH
Confidence             2234568888999863

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=5.7e-36  Score=271.47  Aligned_cols=185  Identities=16%  Similarity=0.114  Sum_probs=141.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|++... ......+.+.+|+.++++++||||++++++|....... +....+++|||+.
T Consensus        34 ~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~-~~~~~~lv~e~~~  112 (353)
T 3coi_A           34 SGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR-NFYDFYLVMPFMQ  112 (353)
T ss_dssp             ECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGG-GCCCCEEEEECCS
T ss_pred             cCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccc-cceeEEEEecccc
Confidence            589999999999999999999999753 23344577899999999999999999999886543221 1124579999997


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                       |+|.+++..       .+++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.....  .
T Consensus       113 -~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~LH~--~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~--~  180 (353)
T 3coi_A          113 -TDLQKIMGL-------KFSEEKIQYLVYQMLKGLKYIHS--AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--M  180 (353)
T ss_dssp             -EEGGGTTTS-------CCCHHHHHHHHHHHHHHHHHHHH--TTCCCSSCCGGGEEECTTCCEEECSTTCTTC-------
T ss_pred             -CCHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEeECCCCcEEEeecccccCCCCC--c
Confidence             588888743       28999999999999999999999  78999999999999999999999999999865432  3


Q ss_pred             ceeeccceeeccCccccc-h-hhhhHhHhCCcccccccccc
Q 019481          164 LTALDTSSVSAQSGKTGM-E-MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~-~-~~~~~~~s~g~~~~~~~~~~  202 (340)
                      ....||+.|+||+...+. . -...|+|+.|...+.+.++.
T Consensus       181 ~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~  221 (353)
T 3coi_A          181 TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK  221 (353)
T ss_dssp             ---CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             cccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCC
Confidence            345788889998644331 1 11346666666665555444

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=3e-35  Score=269.63  Aligned_cols=183  Identities=16%  Similarity=0.117  Sum_probs=141.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CC-----ccccccccccccccccCCcceeeee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HP-----NQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hp-----nIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      .|+||.||+|++..+++.||+|+++.  .....+.+.+|+++++.++ |+     +|++++++|..       ....+++
T Consensus        64 ~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-------~~~~~lv  134 (382)
T 2vx3_A           64 KGSFGQVVKAYDRVEQEWVAIKIIKN--KKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF-------RNHLCLV  134 (382)
T ss_dssp             EETTEEEEEEEETTTTEEEEEEEECS--SHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE-------TTEEEEE
T ss_pred             ecCCEEEEEEEEcCCCcEEEEEEEec--cHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc-------CCceEEE
Confidence            58999999999999999999999963  2344566788999998886 55     48888886653       3467899


Q ss_pred             eccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEec--CCCceEEecccccee
Q 019481           79 KWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLD--ETFKCNLSDFSTAKV  156 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~--~~~~~kl~DFGla~~  156 (340)
                      |||++ |+|.+++.....   ..+++..++.++.||+.||.|||+.+.+|+||||||+|||++  .++.+||+|||+|+.
T Consensus       135 ~e~~~-~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~  210 (382)
T 2vx3_A          135 FEMLS-YNLYDLLRNTNF---RGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ  210 (382)
T ss_dssp             EECCC-CBHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred             EecCC-CCHHHHHhhcCc---CCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCcee
Confidence            99996 599999987653   349999999999999999999995226799999999999995  478899999999987


Q ss_pred             ecccCCcceeeccceeeccCccccchhh-hhHhHhCCcccccccccc
Q 019481          157 SAVENADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       157 ~~~~~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~  202 (340)
                      ...  .....+||+.|+|||.+.+..+. ..|+|+.|...+.+.++.
T Consensus       211 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~  255 (382)
T 2vx3_A          211 LGQ--RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE  255 (382)
T ss_dssp             TTC--CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             ccc--ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            643  23456789999999654432221 235666555555554443

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=1.4e-35  Score=285.06  Aligned_cols=191  Identities=16%  Similarity=0.076  Sum_probs=153.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|.+..+++.||+|+++........+.+.+|++++++++||||+++++++...... .+....+++|||++|
T Consensus        24 ~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~-~~~~~~~LVmEy~~g  102 (676)
T 3qa8_A           24 TGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKL-APNDLPLLAMEYCEG  102 (676)
T ss_dssp             BCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCC-CTTSSCCCEEECCSS
T ss_pred             eCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccc-cCCCeEEEEEEeCCC
Confidence            5899999999999999999999998655566677899999999999999999999977543222 234567899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCc---eEEeccccceeecccC
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFK---CNLSDFSTAKVSAVEN  161 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~---~kl~DFGla~~~~~~~  161 (340)
                      |+|.+++.....  ...+++..++.++.|++.||+|||+  ++|+||||||+||+++.++.   +||+|||+++......
T Consensus       103 gsL~~~L~~~~~--~~~lse~~i~~I~~QLl~aL~yLHs--~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~  178 (676)
T 3qa8_A          103 GDLRKYLNQFEN--CCGLKEGPIRTLLSDISSALRYLHE--NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE  178 (676)
T ss_dssp             CBHHHHHHSSSC--TTCCCSSHHHHHHHHHHHHHHHHHH--TTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCC
T ss_pred             CCHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHHH--CCCccCCCCHHHeEeecCCCceeEEEccccccccccccc
Confidence            999999987553  1348999999999999999999999  77999999999999997765   9999999999887766


Q ss_pred             CcceeeccceeeccCccccchhh-hhHhHhCCcccccccc
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAE  200 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~  200 (340)
                      ......||+.|++|+.+.+..+. ..|+|+.|...+.+.+
T Consensus       179 ~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLlt  218 (676)
T 3qa8_A          179 LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT  218 (676)
T ss_dssp             CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHS
T ss_pred             ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHH
Confidence            66677899999999754322211 2345554444444433

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=6.1e-36  Score=267.70  Aligned_cols=233  Identities=13%  Similarity=0.033  Sum_probs=170.4

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCch-----hhHHHHHHHHHHhhhcC--CCccccccccccccccccCCcceee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPL-----QLRRDDDGKLDSLEEIF--HPNQVKPSGYWSMNICLTGDRRYCW   76 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~-----~~~~~~~~E~~~l~~l~--hpnIv~l~~~f~~~~~~~~~~~~~~   76 (340)
                      ..|+||.||+|++..+++.||+|+++.....     ...+.+.+|+.++++++  ||||++++++|.       +....+
T Consensus        52 g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~-------~~~~~~  124 (320)
T 3a99_A           52 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE-------RPDSFV  124 (320)
T ss_dssp             SSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE-------CSSEEE
T ss_pred             eeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe-------cCCcEE
Confidence            3689999999999999999999999753211     12355778999999996  599999999775       334677


Q ss_pred             eeeccccC-CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEec-CCCceEEeccccc
Q 019481           77 KNKWLMQK-KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLD-ETFKCNLSDFSTA  154 (340)
Q Consensus        77 ~~~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~-~~~~~kl~DFGla  154 (340)
                      +++|++.+ ++|.+++.....     +++..++.++.||++||+|||+  ++|+||||||+|||++ .++.+||+|||++
T Consensus       125 lv~e~~~~~~~L~~~l~~~~~-----l~~~~~~~i~~qi~~~L~~LH~--~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~  197 (320)
T 3a99_A          125 LILERPEPVQDLFDFITERGA-----LQEELARSFFWQVLEAVRHCHN--CGVLHRDIKDENILIDLNRGELKLIDFGSG  197 (320)
T ss_dssp             EEEECCSSEEEHHHHHHHHCS-----CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             EEEEcCCCCccHHHHHhccCC-----CCHHHHHHHHHHHHHHHHHHHH--CCcEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence            99999876 899999988665     9999999999999999999999  7899999999999999 6899999999999


Q ss_pred             eeecccCCcceeeccceeeccCccccchh--hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHH
Q 019481          155 KVSAVENADLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYL  232 (340)
Q Consensus       155 ~~~~~~~~~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (340)
                      +..... ......||+.|++||.+.+...  ...|+|+.|...+.+.++.  .|                   |......
T Consensus       198 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~--~p-------------------f~~~~~~  255 (320)
T 3a99_A          198 ALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IP-------------------FEHDEEI  255 (320)
T ss_dssp             EECCSS-CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSS--CS-------------------CCSHHHH
T ss_pred             cccccc-cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCC--CC-------------------CCChhhh
Confidence            877543 2345678888998864433222  1235565555555444333  22                   2111111


Q ss_pred             HHHHHhhhhccccccCcCCc---cccccccccCCCCchHHHHhhcCccee
Q 019481          233 LLIATLLSTITFLSALKITG---CKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      .  .   ..  .......+.   .+...||+.||.+|||++++++|||+.
T Consensus       256 ~--~---~~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~  298 (320)
T 3a99_A          256 I--R---GQ--VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ  298 (320)
T ss_dssp             H--H---CC--CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred             h--c---cc--ccccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhc
Confidence            0  0   00  000111111   233478999999999999999999993

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=3.6e-35  Score=262.48  Aligned_cols=159  Identities=19%  Similarity=0.171  Sum_probs=132.3

Q ss_pred             CCcceEEEEEE----cCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVP----FPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~----~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|+||.||++.    +..+++.||+|+++........+.+.+|++++++++||||+++++++...     +....+++||
T Consensus        41 ~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~~~lv~e  115 (318)
T 3lxp_A           41 EGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA-----GAASLQLVME  115 (318)
T ss_dssp             ECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TTTEEEEEEC
T ss_pred             CCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecC-----CCceEEEEEe
Confidence            58999997764    45688999999998765556677899999999999999999999977532     3457789999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      |+++|+|.+++....      +++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.....
T Consensus       116 ~~~~~~L~~~l~~~~------~~~~~~~~i~~~l~~~l~~LH~--~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~  187 (318)
T 3lxp_A          116 YVPLGSLRDYLPRHS------IGLAQLLLFAQQICEGMAYLHA--QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG  187 (318)
T ss_dssp             CCTTCBHHHHGGGSC------CCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred             cccCCcHHHHHhhCC------CCHHHHHHHHHHHHHHHHHHHh--CCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence            999999999997643      8999999999999999999999  78999999999999999999999999999887654


Q ss_pred             CC----cceeeccceeeccC
Q 019481          161 NA----DLTALDTSSVSAQS  176 (340)
Q Consensus       161 ~~----~~~~~gt~~~~~p~  176 (340)
                      ..    .....||..|++|+
T Consensus       188 ~~~~~~~~~~~~~~~y~aPE  207 (318)
T 3lxp_A          188 HEYYRVREDGDSPVFWYAPE  207 (318)
T ss_dssp             CSEEEC---CCCCGGGCCHH
T ss_pred             ccccccccCCCCCceeeChH
Confidence            32    22334666677775

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=9.6e-36  Score=259.61  Aligned_cols=181  Identities=14%  Similarity=0.091  Sum_probs=143.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++.  ++.||+|+++... .....+.+.+|++++++++||||+++++++...     +....++++||++
T Consensus        20 ~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~~~lv~e~~~   92 (271)
T 3kmu_A           20 ENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP-----PAPHPTLITHWMP   92 (271)
T ss_dssp             EETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTT-----TSSSCEEEEECCT
T ss_pred             CCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccC-----CCCCeEeeecccC
Confidence            5899999999985  7889999998632 345567799999999999999999999976532     3357789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCc--eecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQ--VIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~--iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +|+|.+++.....   ..+++..+..++.||++||+|||+  ++  |+||||||+||+++.++.+||+|||++.....  
T Consensus        93 ~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~--~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~--  165 (271)
T 3kmu_A           93 YGSLYNVLHEGTN---FVVDQSQAVKFALDMARGMAFLHT--LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS--  165 (271)
T ss_dssp             TCBHHHHHHSCSS---CCCCHHHHHHHHHHHHHHHHHHTT--SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC--
T ss_pred             CCcHHHHHhhccc---CCCCHHHHHHHHHHHHHHHHHHhc--CCCceecCCCccceEEEcCCcceeEEeccceeeecc--
Confidence            9999999987654   358999999999999999999999  77  99999999999999999999999988754322  


Q ss_pred             CcceeeccceeeccCccccchhh----hhHhHhCCccccccccc
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMK----MAQLESGGWRAHDEAEK  201 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~----~~~~~s~g~~~~~~~~~  201 (340)
                        ....||+.|+|||.+.+....    ..|+|+.|...+.+.++
T Consensus       166 --~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g  207 (271)
T 3kmu_A          166 --PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTR  207 (271)
T ss_dssp             --TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHC
T ss_pred             --cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhC
Confidence              234678888888654432222    24666655555555443

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=9.7e-36  Score=267.84  Aligned_cols=181  Identities=14%  Similarity=0.099  Sum_probs=142.2

Q ss_pred             CCcceEEEEEEc-CCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCc------cccccccccccccccCCcceeee
Q 019481            5 APSFSVLIHVPF-PDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPN------QVKPSGYWSMNICLTGDRRYCWK   77 (340)
Q Consensus         5 ~G~fg~V~~~~~-~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpn------Iv~l~~~f~~~~~~~~~~~~~~~   77 (340)
                      .|+||.||+|++ ..+++.||+|+++.  .....+.+.+|+++++.++|++      |++++++|..       ....++
T Consensus        24 ~G~~g~V~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~-------~~~~~l   94 (339)
T 1z57_A           24 EGAFGKVVECIDHKAGGRHVAVKIVKN--VDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH-------HGHICI   94 (339)
T ss_dssp             EETTEEEEEEEETTTTTEEEEEEEECS--SHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE-------TTEEEE
T ss_pred             cCCCeEEEEEEecCCCCcEEEEEEEec--CCchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc-------CCcEEE
Confidence            589999999998 56889999999963  2345577889999999997664      8999997753       337789


Q ss_pred             eeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC---------------
Q 019481           78 NKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE---------------  142 (340)
Q Consensus        78 ~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~---------------  142 (340)
                      +|||+ +++|.+++.....   ..+++..+..++.||++||+|||+  ++|+||||||+|||++.               
T Consensus        95 v~e~~-~~~l~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~--~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~  168 (339)
T 1z57_A           95 VFELL-GLSTYDFIKENGF---LPFRLDHIRKMAYQICKSVNFLHS--NKLTHTDLKPENILFVQSDYTEAYNPKIKRDE  168 (339)
T ss_dssp             EEECC-CCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEESCCCEEEEEC----CEE
T ss_pred             EEcCC-CCCHHHHHHhcCC---CCCcHHHHHHHHHHHHHHHHHHHH--CCCcCCCCCHHHEEEeccccccccCCcccccc
Confidence            99999 8899999987653   348999999999999999999999  88999999999999987               


Q ss_pred             ----CCceEEeccccceeecccCCcceeeccceeeccCccccchhh-hhHhHhCCcccccccccc
Q 019481          143 ----TFKCNLSDFSTAKVSAVENADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       143 ----~~~~kl~DFGla~~~~~~~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~  202 (340)
                          ++.+||+|||+++....  ......||+.|+||+.+.+..+. ..|+|+.|...+.+.++.
T Consensus       169 ~~~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~  231 (339)
T 1z57_A          169 RTLINPDIKVVDFGSATYDDE--HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGF  231 (339)
T ss_dssp             EEESCCCEEECCCSSCEETTS--CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             ccccCCCceEeeCcccccCcc--ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCC
Confidence                67899999999987543  23456789999999644432221 235666555555554443

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.5e-35  Score=270.34  Aligned_cols=161  Identities=19%  Similarity=0.153  Sum_probs=123.8

Q ss_pred             CCCcceEEEEEEcCCC---CceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDD---RDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~---~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ..|+||.||+|++..+   +..||+|.++........+.+.+|+.++++++||||+++++++.      .+....+++||
T Consensus        98 G~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~------~~~~~~~lv~e  171 (373)
T 3c1x_A           98 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL------RSEGSPLVVLP  171 (373)
T ss_dssp             ECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEEC------CCSSCCEEEEE
T ss_pred             eeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEE------cCCCCeEEEEE
Confidence            3689999999987543   34689999876555566788999999999999999999999643      23346679999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      |+++|+|.++++....    .+++..+..++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+++.....
T Consensus       172 ~~~~g~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~--~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~  245 (373)
T 3c1x_A          172 YMKHGDLRNFIRNETH----NPTVKDLIGFGLQVAKGMKFLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK  245 (373)
T ss_dssp             CCTTCBHHHHHHCTTC----CCBHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred             CCCCCCHHHHHhhccc----CCCHHHHHHHHHHHHHHHHHHHH--CCEecCccchheEEECCCCCEEEeecccccccccc
Confidence            9999999999987654    38999999999999999999999  88999999999999999999999999999866443


Q ss_pred             CC-----cceeeccceeeccC
Q 019481          161 NA-----DLTALDTSSVSAQS  176 (340)
Q Consensus       161 ~~-----~~~~~gt~~~~~p~  176 (340)
                      ..     .....+|+.|+||+
T Consensus       246 ~~~~~~~~~~~~~~~~y~aPE  266 (373)
T 3c1x_A          246 EFDSVHNKTGAKLPVKWMALE  266 (373)
T ss_dssp             ------------CCGGGSCHH
T ss_pred             ccccccccCCCCCcccccChH
Confidence            21     12234566788775

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=5e-36  Score=269.03  Aligned_cols=180  Identities=13%  Similarity=0.113  Sum_probs=132.4

Q ss_pred             CCcceEEEEEEcCCCCceE----EEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVPFPDDRDDV----MLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~v----AiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|+||.||+|++..+++.+    |+|.+.........+.+.+|+.++++++||||+++++++...        ..++++|
T Consensus        25 ~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--------~~~~v~~   96 (327)
T 3lzb_A           25 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS--------TVQLITQ   96 (327)
T ss_dssp             ECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS--------SEEEEEC
T ss_pred             eCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC--------CceEEEE
Confidence            5899999999998888765    666665444445567889999999999999999999977532        3567899


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      ++++|+|.+++.....    .+++..++.++.||+.||+|||+  ++|+||||||+|||++.++++||+|||+++.....
T Consensus        97 ~~~~g~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~--~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~  170 (327)
T 3lzb_A           97 LMPFGCLLDYVREHKD----NIGSQYLLNWCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE  170 (327)
T ss_dssp             CCSSCBHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred             ecCCCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHhh--CCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence            9999999999987654    39999999999999999999999  88999999999999999999999999999876543


Q ss_pred             CCc---ceeeccceeeccCccccchhh-hhHhHhCCcccccc
Q 019481          161 NAD---LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDE  198 (340)
Q Consensus       161 ~~~---~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~  198 (340)
                      ...   ....||+.|++|+.+.+..+. ..|+|+.|...+.+
T Consensus       171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el  212 (327)
T 3lzb_A          171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL  212 (327)
T ss_dssp             ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHH
Confidence            322   223456677877533221111 23555544444443

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.4e-35  Score=266.28  Aligned_cols=186  Identities=15%  Similarity=0.064  Sum_probs=138.6

Q ss_pred             CCcceEEEEEEc-----CCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeee
Q 019481            5 APSFSVLIHVPF-----PDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         5 ~G~fg~V~~~~~-----~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      .|+||.||+|++     ..+++.||+|+++........+.+.+|+++++++ +||||+++++++..       ....+++
T Consensus        55 ~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-------~~~~~lv  127 (344)
T 1rjb_A           55 SGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL-------SGPIYLI  127 (344)
T ss_dssp             ECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-------SSSCEEE
T ss_pred             CCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee-------CCccEEE
Confidence            589999999996     3466789999998644445567899999999999 89999999997653       3467899


Q ss_pred             eccccCCCHHHHhcccCCC------------------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEe
Q 019481           79 KWLMQKKGLENVHIGEHPA------------------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILL  140 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~------------------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl  140 (340)
                      |||+++|+|.+++......                  ....+++..++.++.||+.||+|||+  ++|+||||||+|||+
T Consensus       128 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~--~~ivH~Dikp~NIll  205 (344)
T 1rjb_A          128 FEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF--KSCVHRDLAARNVLV  205 (344)
T ss_dssp             EECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH--TTEEETTCSGGGEEE
T ss_pred             EecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCChhhEEE
Confidence            9999999999999875431                  01237999999999999999999999  889999999999999


Q ss_pred             cCCCceEEeccccceeecccCCc---ceeeccceeeccCccccchh-hhhHhHhCCccccccc
Q 019481          141 DETFKCNLSDFSTAKVSAVENAD---LTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDEA  199 (340)
Q Consensus       141 ~~~~~~kl~DFGla~~~~~~~~~---~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~~  199 (340)
                      +.++.+||+|||+++........   ....||+.|+||+...+..+ ...|+|+.|...+.+.
T Consensus       206 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~  268 (344)
T 1rjb_A          206 THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF  268 (344)
T ss_dssp             ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHT
T ss_pred             cCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHH
Confidence            99999999999999876554322   23356677888753322111 1235555555444443

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=2.7e-35  Score=262.37  Aligned_cols=185  Identities=20%  Similarity=0.107  Sum_probs=142.9

Q ss_pred             CCcceEEEEEEc-----CCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeee
Q 019481            5 APSFSVLIHVPF-----PDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         5 ~G~fg~V~~~~~-----~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      .|+||.||+|++     ..+++.||+|+++........+.+.+|+++++++ +||||+++++++..       ....+++
T Consensus        33 ~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-------~~~~~lv  105 (313)
T 1t46_A           33 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI-------GGPTLVI  105 (313)
T ss_dssp             ECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-------SSSCEEE
T ss_pred             ccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec-------CCCcEEE
Confidence            589999999984     5678899999998655555667899999999999 89999999997653       3467799


Q ss_pred             eccccCCCHHHHhcccCCC-------------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCc
Q 019481           79 KWLMQKKGLENVHIGEHPA-------------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFK  145 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~-------------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~  145 (340)
                      +||+++|+|.+++......             ....+++..+..++.||++||+|||+  ++|+||||||+||+++.++.
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~Nil~~~~~~  183 (313)
T 1t46_A          106 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRI  183 (313)
T ss_dssp             EECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEEETTTE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCccceEEEcCCCC
Confidence            9999999999999875420             01248999999999999999999999  88999999999999999999


Q ss_pred             eEEeccccceeecccCCc---ceeeccceeeccCccccchhh-hhHhHhCCcccccc
Q 019481          146 CNLSDFSTAKVSAVENAD---LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDE  198 (340)
Q Consensus       146 ~kl~DFGla~~~~~~~~~---~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~  198 (340)
                      +||+|||+++........   ....||+.|++|+...+..+. ..|+|+.|...+.+
T Consensus       184 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el  240 (313)
T 1t46_A          184 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL  240 (313)
T ss_dssp             EEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             EEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHH
Confidence            999999999876554321   233466778888533221111 23455544444444

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=3.8e-35  Score=261.96  Aligned_cols=244  Identities=16%  Similarity=0.086  Sum_probs=167.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|++... .....+.+.+|++++++++||||+++++++...   .......++++||+++
T Consensus        39 ~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~~~~~~lv~e~~~~  114 (317)
T 2buj_A           39 EGGFSYVDLVEGLHDGHFYALKRILCH-EQQDREEAQREADMHRLFNHPNILRLVAYCLRE---RGAKHEAWLLLPFFKR  114 (317)
T ss_dssp             C--CEEEEEEEETTTCCEEEEEEEEES-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEE---ETTEEEEEEEEECCTT
T ss_pred             CCCCeEEEEEEecCCCcEEEEEEEecC-CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEec---cCCCceeEEEEEeCCC
Confidence            689999999999999999999998653 345567789999999999999999999987532   1234478899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc-
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD-  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~-  163 (340)
                      |+|.+++..... ....+++..++.++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+++........ 
T Consensus       115 ~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~--~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~  191 (317)
T 2buj_A          115 GTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIHA--KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGS  191 (317)
T ss_dssp             CBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESH
T ss_pred             CcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEEEcCCCCEEEEecCcchhcccccccc
Confidence            999999986311 01249999999999999999999999  78999999999999999999999999998765432111 


Q ss_pred             ---------ceeeccceeeccCccccch----hhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHH
Q 019481          164 ---------LTALDTSSVSAQSGKTGME----MKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFL  230 (340)
Q Consensus       164 ---------~~~~gt~~~~~p~~~~~~~----~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  230 (340)
                               ....||+.|++||.+.+..    -...|+|+.|...                     .++.++..+|....
T Consensus       192 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il---------------------~el~~g~~p~~~~~  250 (317)
T 2buj_A          192 RQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVL---------------------YAMMFGEGPYDMVF  250 (317)
T ss_dssp             HHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHH---------------------HHHHHSSCTTHHHH
T ss_pred             cccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHH---------------------HHHHhCCCChhhhh
Confidence                     1234688888886543221    1123455544444                     44444444443221


Q ss_pred             HHH--HHHHhhhhccccccCcCCc---cccccccccCCCCchHHHHhhcCc
Q 019481          231 YLL--LIATLLSTITFLSALKITG---CKSEEGYKNNSSLNPICQIVNQHP  276 (340)
Q Consensus       231 ~~~--~~~~~~~~~~~~~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp  276 (340)
                      ...  ..............+..+.   .+...||+.||.+|||+++++++-
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L  301 (317)
T 2buj_A          251 QKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQL  301 (317)
T ss_dssp             HTTSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             cccchhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHh
Confidence            100  0000000111111122222   224478999999999999988763

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=5.8e-36  Score=262.81  Aligned_cols=158  Identities=16%  Similarity=0.158  Sum_probs=129.0

Q ss_pred             CCcceEEEEEEcCC---CCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPD---DRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~---~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||+|++..   ++..||+|++.........+.+.+|++++++++||||+++++++..+        ..++++||
T Consensus        22 ~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--------~~~~v~e~   93 (281)
T 3cc6_A           22 EGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE--------PTWIIMEL   93 (281)
T ss_dssp             ECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS--------SCEEEEEC
T ss_pred             ecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC--------CCEEEEec
Confidence            58999999998643   34569999998655556678899999999999999999999976432        45789999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+++.....    .+++..+..++.|+++||+|||+  ++|+||||||+||+++.++.+||+|||+++......
T Consensus        94 ~~~~~L~~~l~~~~~----~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  167 (281)
T 3cc6_A           94 YPYGELGHYLERNKN----SLKVLTLVLYSLQICKAMAYLES--INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED  167 (281)
T ss_dssp             CTTCBHHHHHHHHTT----TCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCSGGGEEEEETTEEEECCCCGGGCC----
T ss_pred             CCCCCHHHHHHhccc----cCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCccceEEECCCCcEEeCccCCCccccccc
Confidence            999999999987553    38999999999999999999999  789999999999999999999999999998765432


Q ss_pred             C--cceeeccceeeccC
Q 019481          162 A--DLTALDTSSVSAQS  176 (340)
Q Consensus       162 ~--~~~~~gt~~~~~p~  176 (340)
                      .  .....+|+.|+||+
T Consensus       168 ~~~~~~~~~~~~y~aPE  184 (281)
T 3cc6_A          168 YYKASVTRLPIKWMSPE  184 (281)
T ss_dssp             -----CCCCCGGGCCHH
T ss_pred             ccccccCCCCcceeCch
Confidence            1  22334566777775

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=6.1e-36  Score=290.20  Aligned_cols=157  Identities=14%  Similarity=0.151  Sum_probs=127.7

Q ss_pred             CCcceEEEEEE--cCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVP--FPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~--~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||+|.  ...+++.||+|+++... .....+.+.+|+++|++++|||||++++++...        ..+++|||
T Consensus       379 ~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--------~~~lv~E~  450 (635)
T 4fl3_A          379 SGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE--------SWMLVMEM  450 (635)
T ss_dssp             ECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS--------SEEEEEEC
T ss_pred             cCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC--------CEEEEEEc
Confidence            58999999995  45677899999997532 234467899999999999999999999976422        46699999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+|+.+....
T Consensus       451 ~~~g~L~~~l~~~~~-----l~~~~~~~i~~qi~~~L~yLH~--~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~  523 (635)
T 4fl3_A          451 AELGPLNKYLQQNRH-----VKDKNIIELVHQVSMGMKYLEE--SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE  523 (635)
T ss_dssp             CTTEEHHHHHHHCTT-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--
T ss_pred             cCCCCHHHHHhhCCC-----CCHHHHHHHHHHHHHHHHHHHH--CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCc
Confidence            999999999987665     9999999999999999999999  889999999999999999999999999998765432


Q ss_pred             C----cceeeccceeeccC
Q 019481          162 A----DLTALDTSSVSAQS  176 (340)
Q Consensus       162 ~----~~~~~gt~~~~~p~  176 (340)
                      .    .....+|..|+|||
T Consensus       524 ~~~~~~~~~~~t~~y~APE  542 (635)
T 4fl3_A          524 NYYKAQTHGKWPVKWYAPE  542 (635)
T ss_dssp             -----------CGGGSCHH
T ss_pred             cccccccCCCCceeeeChh
Confidence            1    12234556677774

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=2.1e-35  Score=265.81  Aligned_cols=163  Identities=15%  Similarity=0.139  Sum_probs=132.2

Q ss_pred             CCcceEEEEEEcC-------CCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceee
Q 019481            5 APSFSVLIHVPFP-------DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCW   76 (340)
Q Consensus         5 ~G~fg~V~~~~~~-------~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~   76 (340)
                      .|+||.||+|++.       .+++.||+|+++........+.+.+|+++++++ +||||+++++++.       +....+
T Consensus        45 ~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-------~~~~~~  117 (334)
T 2pvf_A           45 EGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-------QDGPLY  117 (334)
T ss_dssp             ECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-------SSSCCE
T ss_pred             ecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc-------cCCceE
Confidence            5899999999975       456789999998655556677899999999999 8999999999765       344678


Q ss_pred             eeeccccCCCHHHHhcccCCC-----------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCc
Q 019481           77 KNKWLMQKKGLENVHIGEHPA-----------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFK  145 (340)
Q Consensus        77 ~~~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~  145 (340)
                      +++||+++|+|.+++......           ....+++..++.++.||++||+|||+  ++|+||||||+|||++.++.
T Consensus       118 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~--~~ivH~Dlkp~NIll~~~~~  195 (334)
T 2pvf_A          118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNV  195 (334)
T ss_dssp             EEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEECTTCC
T ss_pred             EEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh--CCeeCCCCccceEEEcCCCC
Confidence            999999999999999875421           01248999999999999999999999  88999999999999999999


Q ss_pred             eEEeccccceeecccCC---cceeeccceeeccC
Q 019481          146 CNLSDFSTAKVSAVENA---DLTALDTSSVSAQS  176 (340)
Q Consensus       146 ~kl~DFGla~~~~~~~~---~~~~~gt~~~~~p~  176 (340)
                      +||+|||+++.......   .....+|+.|+||+
T Consensus       196 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  229 (334)
T 2pvf_A          196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE  229 (334)
T ss_dssp             EEECCCTTCEECTTTSSEECCSCCCCCGGGCCHH
T ss_pred             EEEccccccccccccccccccCCCCcccceeChH
Confidence            99999999987655322   22234566677775

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=1.7e-35  Score=265.54  Aligned_cols=160  Identities=17%  Similarity=0.169  Sum_probs=134.6

Q ss_pred             CCcceEEEEEE----cCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVP----FPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~----~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|+||.||+|+    +..+++.||+|++.... ....+.+.+|++++++++||||+++++++.     ..+....+++||
T Consensus        33 ~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~~~lv~e  106 (327)
T 3lxl_A           33 KGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKYRGVSY-----GPGRQSLRLVME  106 (327)
T ss_dssp             EETTEEEEEEEECTTSSSCSEEEEEEEESSCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSSSCEEEEEEE
T ss_pred             CCCCeEEEEEEeccCCCCcceEEEEEEeccCC-HHHHHHHHHHHHHHHhcCCCceeEEEEEEe-----cCCCceEEEEEe
Confidence            58999999999    67789999999997543 345567899999999999999999999664     235557889999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      |+++|+|.+++.....    .+++..++.++.||+.||+|||+  ++|+||||||+|||++.++++||+|||+++.....
T Consensus       107 ~~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~al~~lH~--~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~  180 (327)
T 3lxl_A          107 YLPSGCLRDFLQRHRA----RLDASRLLLYSSQICKGMEYLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD  180 (327)
T ss_dssp             CCTTCBHHHHHHHHGG----GCCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred             ecCCCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHh--CCccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence            9999999999987543    39999999999999999999999  88999999999999999999999999999877543


Q ss_pred             CC----cceeeccceeeccC
Q 019481          161 NA----DLTALDTSSVSAQS  176 (340)
Q Consensus       161 ~~----~~~~~gt~~~~~p~  176 (340)
                      ..    .....||..|++|+
T Consensus       181 ~~~~~~~~~~~~~~~y~aPE  200 (327)
T 3lxl_A          181 KDYYVVREPGQSPIFWYAPE  200 (327)
T ss_dssp             CSEEECSSCCCSCGGGSCHH
T ss_pred             CccceeeccCCccccccCHH
Confidence            32    22334666677775

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.8e-35  Score=258.36  Aligned_cols=182  Identities=16%  Similarity=0.115  Sum_probs=141.0

Q ss_pred             CCcceEEEEEEcCCCCc---eEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRD---DVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~---~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||+|++..+++   .||+|++.........+.+.+|++++++++||||++++++|.+.      ....++++||
T Consensus        31 ~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~~~~~v~e~  104 (298)
T 3pls_A           31 KGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPP------EGLPHVLLPY  104 (298)
T ss_dssp             EETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS------SSCCEEEECC
T ss_pred             cCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecC------CCCcEEEEec
Confidence            58999999999755444   79999998655556678899999999999999999999977532      2344789999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +.+|+|.+++.....    .+++..+..++.|+++||+|||+  ++|+||||||+|||++.++.+||+|||+++......
T Consensus       105 ~~~~~L~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~LH~--~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~  178 (298)
T 3pls_A          105 MCHGDLLQFIRSPQR----NPTVKDLISFGLQVARGMEYLAE--QKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE  178 (298)
T ss_dssp             CTTCBHHHHHHCTTC----CCBHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred             ccCCCHHHHHhcccc----CCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence            999999999987543    48999999999999999999999  889999999999999999999999999998654321


Q ss_pred             -----CcceeeccceeeccCccccchhh-hhHhHhCCcccccc
Q 019481          162 -----ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDE  198 (340)
Q Consensus       162 -----~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~  198 (340)
                           ......+|+.|++|+...+..+. ..|+|+.|...+.+
T Consensus       179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  221 (298)
T 3pls_A          179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWEL  221 (298)
T ss_dssp             GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHH
Confidence                 22234567778877533222111 23455444444443

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=1.4e-35  Score=261.68  Aligned_cols=157  Identities=14%  Similarity=0.149  Sum_probs=128.4

Q ss_pred             CCcceEEEEE--EcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHV--PFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~--~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||+|  ....+++.||+|+++... .....+.+.+|++++++++||||+++++++.        ....++++||
T Consensus        27 ~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~~lv~e~   98 (291)
T 1xbb_A           27 SGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE--------AESWMLVMEM   98 (291)
T ss_dssp             ECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE--------SSSEEEEEEC
T ss_pred             cccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC--------CCCcEEEEEe
Confidence            5899999999  456678899999997532 2334677899999999999999999999763        2256799999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+++.....     +++..+..++.||++||+|||+  ++|+||||||+||+++.++.+||+|||+++......
T Consensus        99 ~~~~~L~~~l~~~~~-----~~~~~~~~i~~qi~~~l~~LH~--~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  171 (291)
T 1xbb_A           99 AELGPLNKYLQQNRH-----VKDKNIIELVHQVSMGMKYLEE--SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE  171 (291)
T ss_dssp             CTTEEHHHHHHHCTT-----CCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred             CCCCCHHHHHHhCcC-----CCHHHHHHHHHHHHHHHHHHHh--CCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCC
Confidence            999999999988665     9999999999999999999999  889999999999999999999999999998775543


Q ss_pred             Cc----ceeeccceeeccC
Q 019481          162 AD----LTALDTSSVSAQS  176 (340)
Q Consensus       162 ~~----~~~~gt~~~~~p~  176 (340)
                      ..    ....+|+.|++|+
T Consensus       172 ~~~~~~~~~~~~~~y~aPE  190 (291)
T 1xbb_A          172 NYYKAQTHGKWPVKWYAPE  190 (291)
T ss_dssp             SEEEC----CCCGGGCCHH
T ss_pred             CcccccccCCCCceeeChH
Confidence            21    1223456677774

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=3.7e-36  Score=284.36  Aligned_cols=158  Identities=16%  Similarity=0.134  Sum_probs=132.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|+++...  ...+.+.+|+++|++++||||+++++++.       +....+++|||+++
T Consensus       230 ~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~-------~~~~~~lv~E~~~~  300 (495)
T 1opk_A          230 GGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCT-------REPPFYIITEFMTY  300 (495)
T ss_dssp             GGTTSSEEEEEEGGGTEEEEEEECCSSS--SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-------SSSSCEEEEECCTT
T ss_pred             CCCCeEEEEEEEcCCCeEEEEEEecCcc--cchHHHHHHHHHHHhcCCCCEeeEEEEEe-------cCCcEEEEEEccCC
Confidence            5899999999999989999999997432  34567899999999999999999999664       33467899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC--
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA--  162 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~--  162 (340)
                      |+|.++++....   ..+++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.......  
T Consensus       301 g~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~--~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  375 (495)
T 1opk_A          301 GNLLDYLRECNR---QEVSAVVLLYMATQISSAMEYLEK--KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA  375 (495)
T ss_dssp             CBHHHHHHHSCT---TTSCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEEC
T ss_pred             CCHHHHHHhcCc---CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCChhhEEECCCCcEEEeecccceeccCCceee
Confidence            999999987543   358999999999999999999999  8899999999999999999999999999987654321  


Q ss_pred             cceeeccceeeccC
Q 019481          163 DLTALDTSSVSAQS  176 (340)
Q Consensus       163 ~~~~~gt~~~~~p~  176 (340)
                      .....++..|+||+
T Consensus       376 ~~~~~~~~~y~aPE  389 (495)
T 1opk_A          376 HAGAKFPIKWTAPE  389 (495)
T ss_dssp             CTTCCCCGGGCCHH
T ss_pred             cCCCcCCcceeCHh
Confidence            11223455677774

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=3.8e-35  Score=267.79  Aligned_cols=183  Identities=12%  Similarity=0.066  Sum_probs=142.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-----------CCccccccccccccccccCCcc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-----------HPNQVKPSGYWSMNICLTGDRR   73 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-----------hpnIv~l~~~f~~~~~~~~~~~   73 (340)
                      .|+||.||+|++..+++.||+|++..  .....+.+.+|++++++++           ||||++++++|....   .+..
T Consensus        29 ~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~~~  103 (373)
T 1q8y_A           29 WGHFSTVWLAKDMVNNTHVAMKIVRG--DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKG---PNGV  103 (373)
T ss_dssp             ECSSEEEEEEEETTTTEEEEEEEECS--CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEE---TTEE
T ss_pred             ecCCeEEEEEEecCCCcEEEEEEecC--CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccC---CCCc
Confidence            58999999999999999999999963  3344567889999999887           899999999886432   2334


Q ss_pred             eeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCC-ceecCCCCCCcEEec------CCCce
Q 019481           74 YCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEK-QVIYRDFKAPNILLD------ETFKC  146 (340)
Q Consensus        74 ~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~-~iiHrDlKp~NILl~------~~~~~  146 (340)
                      ..++++|++ +++|.+++.....   ..+++..+..++.||+.||+|||+  + +|+||||||+|||++      ..+.+
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~lH~--~~~ivH~Dikp~NIll~~~~~~~~~~~~  177 (373)
T 1q8y_A          104 HVVMVFEVL-GENLLALIKKYEH---RGIPLIYVKQISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQI  177 (373)
T ss_dssp             EEEEEECCC-CEEHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHHH--TTCEECSCCSGGGEEEEEEETTTTEEEE
T ss_pred             eEEEEEecC-CCCHHHHHHHhhc---cCCcHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChHHeEEeccCCCcCcceE
Confidence            778999999 8899999987543   349999999999999999999999  7 799999999999994      44589


Q ss_pred             EEeccccceeecccCCcceeeccceeeccCccccchhh-hhHhHhCCcccccccc
Q 019481          147 NLSDFSTAKVSAVENADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAE  200 (340)
Q Consensus       147 kl~DFGla~~~~~~~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~  200 (340)
                      ||+|||+|+.....  .....||+.|+|||.+.+..+. ..|+|+.|...+.+.+
T Consensus       178 kl~Dfg~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~  230 (373)
T 1q8y_A          178 KIADLGNACWYDEH--YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELIT  230 (373)
T ss_dssp             EECCCTTCEETTBC--CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             EEcccccccccCCC--CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHh
Confidence            99999999876543  3345789999999643322211 2355555554444433

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=1.1e-35  Score=267.11  Aligned_cols=182  Identities=17%  Similarity=0.113  Sum_probs=146.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|++..+++.||+|++....   ..+.+.+|+++++++ +||||+++++++..       ....+++|||+
T Consensus        18 g~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-------~~~~~lv~e~~   87 (330)
T 2izr_A           18 GCGNFGELRLGKNLYTNEYVAIKLEPMKS---RAPQLHLEYRFYKQLGSGDGIPQVYYFGPC-------GKYNAMVLELL   87 (330)
T ss_dssp             CC-CTTSEEEEEETTTTEEEEEEEEETTC---SSCCHHHHHHHHHHHCSCTTSCCEEEEEEE-------TTEEEEEEECC
T ss_pred             eccCCceEEEEEECCCCcEEEEEEecccc---chHHHHHHHHHHHHhhCCCCCCEEEEEEec-------CCccEEEEEeC
Confidence            36899999999999999999999997432   234588999999999 89999999997653       34778999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCc-----eEEeccccceee
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFK-----CNLSDFSTAKVS  157 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~-----~kl~DFGla~~~  157 (340)
                       +|+|.+++.....    .+++..++.++.||+.||+|||+  ++|+||||||+|||++.++.     +||+|||+|+..
T Consensus        88 -~~~L~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~LH~--~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~  160 (330)
T 2izr_A           88 -GPSLEDLFDLCDR----TFSLKTVLMIAIQLISRMEYVHS--KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY  160 (330)
T ss_dssp             -CCBHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred             -CCCHHHHHHHcCC----CCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence             8999999987533    39999999999999999999999  88999999999999999887     999999999976


Q ss_pred             cccCC--------cceeeccceeeccCccccchhh-hhHhHhCCcccccccccc
Q 019481          158 AVENA--------DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       158 ~~~~~--------~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~  202 (340)
                      .....        ....+||+.|+||+.+.+.++. ..|+|+.|...+.+.++.
T Consensus       161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~  214 (330)
T 2izr_A          161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGS  214 (330)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             ecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCC
Confidence            55332        2456789999998654443322 236666666666555444

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.8e-35  Score=266.07  Aligned_cols=159  Identities=16%  Similarity=0.177  Sum_probs=125.2

Q ss_pred             CCcceEEEEEEcCCCC----ceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVPFPDDR----DDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~----~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|+||.||+|++..++    ..||+|+++..........+.+|++++++++||||+++++++.       +....+++||
T Consensus        54 ~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------~~~~~~lv~e  126 (333)
T 1mqb_A           54 AGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS-------KYKPMMIITE  126 (333)
T ss_dssp             ECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-------SSSSEEEEEE
T ss_pred             cCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEe-------cCCCcEEEEe
Confidence            5899999999986553    3599999986555556677999999999999999999999664       3446789999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      |+++|+|.+++.....    .+++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.....
T Consensus       127 ~~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~--~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~  200 (333)
T 1mqb_A          127 YMENGALDKFLREKDG----EFSVLQLVGMLRGIAAGMKYLAN--MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD  200 (333)
T ss_dssp             CCTTEEHHHHHHHTTT----CSCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred             CCCCCcHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHh--CCeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence            9999999999987543    39999999999999999999999  88999999999999999999999999999876543


Q ss_pred             CCc----ceeeccceeeccC
Q 019481          161 NAD----LTALDTSSVSAQS  176 (340)
Q Consensus       161 ~~~----~~~~gt~~~~~p~  176 (340)
                      ...    ....+|..|++|+
T Consensus       201 ~~~~~~~~~~~~~~~y~aPE  220 (333)
T 1mqb_A          201 PEATYTTSGGKIPIRWTAPE  220 (333)
T ss_dssp             ----------CCCGGGSCHH
T ss_pred             cccccccCCCCccccccCch
Confidence            211    1123455677774

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.6e-35  Score=262.36  Aligned_cols=182  Identities=16%  Similarity=0.088  Sum_probs=137.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|++....  .....+.+.+|++++++++||||+++++++..       ....++++||+
T Consensus        44 ~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-------~~~~~lv~e~~  116 (309)
T 2h34_A           44 RGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI-------DGQLYVDMRLI  116 (309)
T ss_dssp             ECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-------TTEEEEEEECC
T ss_pred             CCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee-------CCeEEEEEEec
Confidence            5899999999999999999999997532  23345778999999999999999999997753       34778999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-  161 (340)
                      ++++|.+++.....     +++..+..++.|++.||+|||+  ++|+||||||+|||++.++.+||+|||+++...... 
T Consensus       117 ~~~~L~~~l~~~~~-----~~~~~~~~i~~qi~~~l~~lH~--~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~  189 (309)
T 2h34_A          117 NGVDLAAMLRRQGP-----LAPPRAVAIVRQIGSALDAAHA--AGATHRDVKPENILVSADDFAYLVDFGIASATTDEKL  189 (309)
T ss_dssp             CCEEHHHHHHHHCS-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred             CCCCHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CcCCcCCCChHHEEEcCCCCEEEecCccCcccccccc
Confidence            99999999987665     9999999999999999999999  789999999999999999999999999998765432 


Q ss_pred             -CcceeeccceeeccCccccchhh-hhHhHhCCcccccccc
Q 019481          162 -ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAE  200 (340)
Q Consensus       162 -~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~  200 (340)
                       ......||+.|++|+.+.+.... ..|+|+.|...+.+.+
T Consensus       190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  230 (309)
T 2h34_A          190 TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLT  230 (309)
T ss_dssp             -------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHH
T ss_pred             ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHH
Confidence             22345688888888654332211 2355554444444433

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=1e-35  Score=266.26  Aligned_cols=164  Identities=15%  Similarity=0.168  Sum_probs=133.8

Q ss_pred             CCcceEEEEEEcC-----CCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            5 APSFSVLIHVPFP-----DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         5 ~G~fg~V~~~~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      .|+||.||+|++.     .+++.||+|+++..........+.+|++++++++||||+++++++.       +....+++|
T Consensus        35 ~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~  107 (322)
T 1p4o_A           35 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS-------QGQPTLVIM  107 (322)
T ss_dssp             ECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC-------SSSSCEEEE
T ss_pred             cCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc-------cCCccEEEE
Confidence            5899999999876     4678899999986555566677899999999999999999999764       344677999


Q ss_pred             ccccCCCHHHHhcccCCC-----ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccc
Q 019481           80 WLMQKKGLENVHIGEHPA-----SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTA  154 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla  154 (340)
                      ||+++|+|.+++......     ....+++..+..++.||+.||+|||+  ++|+||||||+||+++.++++||+|||++
T Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~i~H~dikp~NIli~~~~~~kl~Dfg~~  185 (322)
T 1p4o_A          108 ELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMT  185 (322)
T ss_dssp             ECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH--TTCBCSCCSGGGEEECTTCCEEECCTTCC
T ss_pred             EeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH--CCCccCCCccceEEEcCCCeEEECcCccc
Confidence            999999999999764210     01237899999999999999999999  88999999999999999999999999999


Q ss_pred             eeecccCC---cceeeccceeeccCc
Q 019481          155 KVSAVENA---DLTALDTSSVSAQSG  177 (340)
Q Consensus       155 ~~~~~~~~---~~~~~gt~~~~~p~~  177 (340)
                      +.......   .....||+.|++|+.
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~y~aPE~  211 (322)
T 1p4o_A          186 RDIYETDYYRKGGKGLLPVRWMSPES  211 (322)
T ss_dssp             CGGGGGGCEEGGGSSEECGGGCCHHH
T ss_pred             cccccccccccccCCCCCCCccChhh
Confidence            86644321   223356777887753

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=7.4e-35  Score=259.74  Aligned_cols=234  Identities=12%  Similarity=0.067  Sum_probs=162.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcC--CCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIF--HPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~--hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||+|++.. ++.||+|+++.. ......+.+.+|++++++++  ||||+++++++.       +....+++|| 
T Consensus        38 ~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~-------~~~~~~lv~e-  108 (313)
T 3cek_A           38 SGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI-------TDQYIYMVME-  108 (313)
T ss_dssp             CCSSEEEEEEECTT-CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEE-------CSSEEEEEEC-
T ss_pred             CCCCEEEEEEEcCC-CcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEee-------cCCEEEEEEe-
Confidence            68999999999864 788999999753 33455678899999999997  599999999765       3447889999 


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +.+++|.+++.....     +++..+..++.||++||+|||+  ++|+||||||+|||++ ++.+||+|||+++......
T Consensus       109 ~~~~~L~~~l~~~~~-----~~~~~~~~i~~qi~~aL~~LH~--~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~  180 (313)
T 3cek_A          109 CGNIDLNSWLKKKKS-----IDPWERKSYWKNMLEAVHTIHQ--HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT  180 (313)
T ss_dssp             CCSEEHHHHHHHCSS-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCGGGEEEE-TTEEEECCCSSSCC-----
T ss_pred             cCCCcHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCceecCCCcccEEEE-CCeEEEeeccccccccCcc
Confidence            557899999988665     9999999999999999999999  8899999999999996 4899999999998765433


Q ss_pred             C---cceeeccceeeccCccccc------------hhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhH
Q 019481          162 A---DLTALDTSSVSAQSGKTGM------------EMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETW  226 (340)
Q Consensus       162 ~---~~~~~gt~~~~~p~~~~~~------------~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  226 (340)
                      .   .....||+.|+||+...+.            --...|+|+.|...+.+.++.                     .+|
T Consensus       181 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~---------------------~pf  239 (313)
T 3cek_A          181 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK---------------------TPF  239 (313)
T ss_dssp             ---------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSS---------------------CTT
T ss_pred             ccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCC---------------------Cch
Confidence            2   2345688888888544321            111235555555554443333                     332


Q ss_pred             HHHHHH-HHHHHhhhhccccccCcC----Cc---cccccccccCCCCchHHHHhhcCccee
Q 019481          227 NNFLYL-LLIATLLSTITFLSALKI----TG---CKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       227 ~~~~~~-~~~~~~~~~~~~~~~~~~----p~---~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ...... ......   +........    +.   .+...||+.||.+||+++++++|||+.
T Consensus       240 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~  297 (313)
T 3cek_A          240 QQIINQISKLHAI---IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ  297 (313)
T ss_dssp             TTCCSHHHHHHHH---HCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             hhHHHHHHHHHHH---HhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCcccc
Confidence            211000 000000   011111111    11   234478999999999999999999994

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=1.9e-34  Score=256.28  Aligned_cols=185  Identities=23%  Similarity=0.216  Sum_probs=145.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc---CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI---TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||+|++  +++.||+|++...   ......+.+.+|++++++++||||+++++++.       +....++++||
T Consensus        41 ~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~  111 (307)
T 2nru_A           41 EGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSS-------DGDDLCLVYVY  111 (307)
T ss_dssp             ECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEEC-------SSSSCEEEEEC
T ss_pred             cCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEe-------cCCceEEEEEe
Confidence            689999999987  5778999998752   22344677899999999999999999999765       33467799999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+++.....  ...+++..+..++.||+.||+|||+  ++|+||||||+||+++.++.+||+|||+++......
T Consensus       112 ~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~--~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~  187 (307)
T 2nru_A          112 MPNGSLLDRLSCLDG--TPPLSWHMRCKIAQGAANGINFLHE--NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA  187 (307)
T ss_dssp             CTTCBHHHHHHTGGG--CCCCCHHHHHHHHHHHHHHHHHHHH--TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCS
T ss_pred             cCCCcHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEcCCCcEEEeeccccccccccc
Confidence            999999999975432  1349999999999999999999999  889999999999999999999999999998765432


Q ss_pred             C---cceeeccceeeccCccccchhhhhHhHhCCcccccccccc
Q 019481          162 A---DLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       162 ~---~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~  202 (340)
                      .   .....||+.|++|+...+..-...|+|+.|...+.+.++.
T Consensus       188 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~  231 (307)
T 2nru_A          188 QTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGL  231 (307)
T ss_dssp             SCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCC
T ss_pred             ccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCC
Confidence            2   2235689999999644332222346666665555554443

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=7.6e-35  Score=259.78  Aligned_cols=186  Identities=18%  Similarity=0.059  Sum_probs=142.9

Q ss_pred             CCcceEEEEEEc-----CCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeee
Q 019481            5 APSFSVLIHVPF-----PDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         5 ~G~fg~V~~~~~-----~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      .|+||.||+|++     ..+++.||+|+++........+.+.+|+++++++ +||||+++++++..      +....+++
T Consensus        37 ~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~------~~~~~~lv  110 (316)
T 2xir_A           37 RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK------PGGPLMVI  110 (316)
T ss_dssp             ECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC------TTSCCEEE
T ss_pred             CCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEec------CCCceEEE
Confidence            589999999984     4677899999998655555667899999999999 69999999997643      23357899


Q ss_pred             eccccCCCHHHHhcccCCCc-----------cccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceE
Q 019481           79 KWLMQKKGLENVHIGEHPAS-----------VRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCN  147 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~k  147 (340)
                      +||+++|+|.+++.......           ...+++..+..++.||++||+|||+  ++|+||||||+||+++.++++|
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~--~~i~H~dikp~Nil~~~~~~~k  188 (316)
T 2xir_A          111 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVK  188 (316)
T ss_dssp             EECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEECGGGCEE
T ss_pred             EEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh--CCcccccCccceEEECCCCCEE
Confidence            99999999999998765310           1128899999999999999999999  8899999999999999999999


Q ss_pred             EeccccceeecccCC---cceeeccceeeccCccccchhh-hhHhHhCCcccccc
Q 019481          148 LSDFSTAKVSAVENA---DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDE  198 (340)
Q Consensus       148 l~DFGla~~~~~~~~---~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~  198 (340)
                      |+|||+++.......   .....||+.|+||+...+..+. ..|+|+.|...+.+
T Consensus       189 l~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l  243 (316)
T 2xir_A          189 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI  243 (316)
T ss_dssp             ECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             ECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHH
Confidence            999999987654322   1234567778888533221111 23555544444443

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=7.2e-35  Score=259.76  Aligned_cols=192  Identities=13%  Similarity=0.090  Sum_probs=131.8

Q ss_pred             CCCcceEEEEEEcCC---CCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            4 SAPSFSVLIHVPFPD---DRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~---~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      ..|+||.||+|++..   +++.||+|+++.. ......+.+.+|++++++++||||+++++++......  ....+++++
T Consensus        43 g~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~--~~~~~~~v~  120 (313)
T 3brb_A           43 GEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ--GIPKPMVIL  120 (313)
T ss_dssp             EC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---------CEEEEE
T ss_pred             eecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc--CCcccEEEE
Confidence            368999999998755   5568999999753 3344567789999999999999999999987643211  122568999


Q ss_pred             ccccCCCHHHHhcccCC-CccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec
Q 019481           80 WLMQKKGLENVHIGEHP-ASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      ||+++|+|.+++..... .....+++..++.++.||++||.|||+  ++|+||||||+||+++.++.+||+|||+++...
T Consensus       121 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~--~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~  198 (313)
T 3brb_A          121 PFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN--RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIY  198 (313)
T ss_dssp             ECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT--TTCCCCCCSGGGEEECTTSCEEECSCSCC----
T ss_pred             ecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCcceEEEcCCCcEEEeecCcceecc
Confidence            99999999999853211 012349999999999999999999999  889999999999999999999999999998765


Q ss_pred             ccC---CcceeeccceeeccCccccchhh-hhHhHhCCccccccc
Q 019481          159 VEN---ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEA  199 (340)
Q Consensus       159 ~~~---~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~  199 (340)
                      ...   ......+++.|++|+...+..+. ..|+|+.|...+.+.
T Consensus       199 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~  243 (313)
T 3brb_A          199 SGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIA  243 (313)
T ss_dssp             ------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHH
T ss_pred             cccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHH
Confidence            432   12233456677777533221111 235555555544443

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=4.2e-36  Score=264.46  Aligned_cols=182  Identities=15%  Similarity=0.100  Sum_probs=143.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      ..|+||.||+|++..+++.||+|++...  ....+.+.+|++++++++||||+++++++.       +....++++||++
T Consensus        22 g~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-------~~~~~~~v~e~~~   92 (288)
T 3kfa_A           22 GGGQYGEVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT-------REPPFYIITEFMT   92 (288)
T ss_dssp             GGGTTCSEEEEEEGGGTEEEEEEEECSC--STHHHHHHHHHHHHHHCCCTTBCCEEEEEC-------SSSSEEEEEECCT
T ss_pred             CCCCceeEEEeEecCCCEEEEEEecCcC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-------cCCCEEEEEEcCC
Confidence            3689999999999999999999999743  334577899999999999999999999764       3446789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC-
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA-  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~-  162 (340)
                      +|+|.+++.....   ..+++..+..++.||+.||+|||+  ++|+||||||+||+++.++.+||+|||+++....... 
T Consensus        93 ~~~L~~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~--~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~  167 (288)
T 3kfa_A           93 YGNLLDYLRECNR---QEVSAVVLLYMATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT  167 (288)
T ss_dssp             TEEHHHHHHHCCT---TTSCHHHHHHHHHHHHHHHHHHHH--HTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSE
T ss_pred             CCcHHHHHHhccc---CCccHhHHHHHHHHHHHHHHHHHH--CCccCCCCCcceEEEcCCCCEEEccCccceeccCCccc
Confidence            9999999987544   459999999999999999999999  7899999999999999999999999999987654332 


Q ss_pred             -cceeeccceeeccCccccchhh-hhHhHhCCccccccc
Q 019481          163 -DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEA  199 (340)
Q Consensus       163 -~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~  199 (340)
                       .....+|+.|++|+...+..+. ..|+|+.|...+.+.
T Consensus       168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll  206 (288)
T 3kfa_A          168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA  206 (288)
T ss_dssp             EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             cccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHH
Confidence             1223456678887533211111 235555555554443

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=1e-34  Score=259.20  Aligned_cols=244  Identities=16%  Similarity=0.112  Sum_probs=152.2

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHH-HHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRD-DDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~-~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|++..+++.||+|++........... +..+..+++.++||||+++++++..       ....+++|||+
T Consensus        34 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~-------~~~~~lv~e~~  106 (318)
T 2dyl_A           34 GSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFIT-------NTDVFIAMELM  106 (318)
T ss_dssp             ------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-------SSEEEEEECCC
T ss_pred             eecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEec-------CCcEEEEEecc
Confidence            368999999999999999999999986443333333 4445567888899999999997753       34678999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCC-ceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEK-QVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~-~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                       ++.+..+......    .+++..+..++.||+.||+|||+  + +|+||||||+||+++.++++||+|||+++......
T Consensus       107 -~~~~~~l~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~  179 (318)
T 2dyl_A          107 -GTCAEKLKKRMQG----PIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK  179 (318)
T ss_dssp             -SEEHHHHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHH--HHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred             -CCcHHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHh--hCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence             5566666654332    39999999999999999999999  5 69999999999999999999999999998776655


Q ss_pred             CcceeeccceeeccCccccc-----hh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHH
Q 019481          162 ADLTALDTSSVSAQSGKTGM-----EM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLI  235 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~-----~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (340)
                      ......||+.|++|+.+.+.     .+ ...|+|+.|...+.+.++.  .||.....                .......
T Consensus       180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~--~pf~~~~~----------------~~~~~~~  241 (318)
T 2dyl_A          180 AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ--FPYKNCKT----------------DFEVLTK  241 (318)
T ss_dssp             -------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSS--CTTTTCCS----------------HHHHHHH
T ss_pred             cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCC--CCCCCCCc----------------cHHHHHH
Confidence            55556788888888544210     00 1235555555554444333  22211000                0000000


Q ss_pred             HHhhhhccccccCcCCc---cccccccccCCCCchHHHHhhcCccee
Q 019481          236 ATLLSTITFLSALKITG---CKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       236 ~~~~~~~~~~~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ...............+.   .+...||+.||.+||+++++++|||+.
T Consensus       242 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~  288 (318)
T 2dyl_A          242 VLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIK  288 (318)
T ss_dssp             HHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHH
T ss_pred             HhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHH
Confidence            00000000000011222   224478999999999999999999993

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=1.1e-35  Score=278.54  Aligned_cols=156  Identities=17%  Similarity=0.220  Sum_probs=128.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++.. +..||+|+++...  ...+.+.+|+++|++++||||+++++++.        ....+++|||+++
T Consensus       198 ~G~fg~V~~~~~~~-~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~l~~~~~--------~~~~~lv~e~~~~  266 (454)
T 1qcf_A          198 AGQFGEVWMATYNK-HTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVT--------KEPIYIITEFMAK  266 (454)
T ss_dssp             CCSSEEEEEEEETT-TEEEEEEEECTTS--BCHHHHHHHHHHHTTCCCTTBCCEEEEEC--------SSSCEEEECCCTT
T ss_pred             cCCceEEEEEEECC-ccEEEEEEecCCC--ccHHHHHHHHHHHhhCCCCCEeeEEEEEe--------CCccEEEEeecCC
Confidence            68999999999864 5679999997532  34677999999999999999999999653        2257799999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC--C
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN--A  162 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--~  162 (340)
                      |+|.++++....   ..+++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+|+......  .
T Consensus       267 g~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~--~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~  341 (454)
T 1qcf_A          267 GSLLDFLKSDEG---SKQPLPKLIDFSAQIAEGMAFIEQ--RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA  341 (454)
T ss_dssp             CBHHHHHHSHHH---HTCCHHHHHHHHHHHHHHHHHHHH--TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHT
T ss_pred             CcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHh--CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceec
Confidence            999999986542   248999999999999999999999  889999999999999999999999999998764421  1


Q ss_pred             cceeeccceeeccC
Q 019481          163 DLTALDTSSVSAQS  176 (340)
Q Consensus       163 ~~~~~gt~~~~~p~  176 (340)
                      .....+|..|+||+
T Consensus       342 ~~~~~~~~~y~aPE  355 (454)
T 1qcf_A          342 REGAKFPIKWTAPE  355 (454)
T ss_dssp             TCSSSSCGGGSCHH
T ss_pred             cCCCcccccccCHH
Confidence            11223455677764

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=2.2e-35  Score=261.20  Aligned_cols=160  Identities=19%  Similarity=0.143  Sum_probs=130.4

Q ss_pred             CCcceEEEEEEcCCCC---ceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDR---DDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~---~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||+|++..++   ..+|+|.++........+.+.+|+.++++++||||+++++++.      .+....++++||
T Consensus        35 ~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------~~~~~~~~v~e~  108 (298)
T 3f66_A           35 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL------RSEGSPLVVLPY  108 (298)
T ss_dssp             EETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEC------CSSSCCEEEEEC
T ss_pred             ecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEE------cCCCceEEEEeC
Confidence            5899999999975433   3589999886555666788999999999999999999999643      233466799999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+++.....    .+++..+..++.|++.||+|||+  ++|+||||||+||+++.++.+||+|||+++......
T Consensus       109 ~~~~~L~~~l~~~~~----~~~~~~~~~i~~ql~~~l~~lH~--~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~  182 (298)
T 3f66_A          109 MKHGDLRNFIRNETH----NPTVKDLIGFGLQVAKGMKYLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE  182 (298)
T ss_dssp             CTTCBHHHHHHCTTC----CCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGG
T ss_pred             CCCCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHh--CCccCCCCchheEEECCCCCEEECcccccccccccc
Confidence            999999999987554    38999999999999999999999  889999999999999999999999999998765432


Q ss_pred             C-----cceeeccceeeccC
Q 019481          162 A-----DLTALDTSSVSAQS  176 (340)
Q Consensus       162 ~-----~~~~~gt~~~~~p~  176 (340)
                      .     .....||+.|++|+
T Consensus       183 ~~~~~~~~~~~~~~~y~aPE  202 (298)
T 3f66_A          183 YYSVHNKTGAKLPVKWMALE  202 (298)
T ss_dssp             GCBC-----CCBCGGGSCHH
T ss_pred             hhccccccCCCCCccccChH
Confidence            1     22335667788875

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=4.1e-35  Score=263.61  Aligned_cols=244  Identities=14%  Similarity=0.061  Sum_probs=158.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CCccccccccccccccc-cCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICL-TGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~-~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|++... .....+.+.+|+.+++++. ||||+++++++...... ..+....++++||+
T Consensus        38 ~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~  116 (337)
T 3ll6_A           38 EGGFAFVYEAQDVGSGREYALKRLLSN-EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELC  116 (337)
T ss_dssp             CCSSEEEEEEEETTTCCEEEEEEEEES-SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECC
T ss_pred             cCCceEEEEEEECCCCcEEEEEEecCC-chHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEec
Confidence            689999999999999999999998643 3445567899999999996 99999999977432211 23455688999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCc--eecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQ--VIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~--iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      . |+|.+++.....  ...+++..++.++.||+.||+|||+  ++  |+||||||+|||++.++++||+|||+++.....
T Consensus       117 ~-g~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~--~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~  191 (337)
T 3ll6_A          117 K-GQLVEFLKKMES--RGPLSCDTVLKIFYQTCRAVQHMHR--QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHY  191 (337)
T ss_dssp             S-EEHHHHHHHHHT--TCSCCHHHHHHHHHHHHHHHHHHHT--SSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSC
T ss_pred             C-CCHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHh--CCCCEEEccCCcccEEECCCCCEEEecCccceecccc
Confidence            6 699998875222  1249999999999999999999999  77  999999999999999999999999999876543


Q ss_pred             CC-------------cceeeccceeeccCcc---ccchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCc
Q 019481          161 NA-------------DLTALDTSSVSAQSGK---TGMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTEN  223 (340)
Q Consensus       161 ~~-------------~~~~~gt~~~~~p~~~---~~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  223 (340)
                      ..             .....||+.|++|+..   .+..+ ...|+|+.|...+.+.++.  .||....            
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~--~p~~~~~------------  257 (337)
T 3ll6_A          192 PDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQ--HPFEDGA------------  257 (337)
T ss_dssp             C-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSS--CCC----------------
T ss_pred             CcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCC--CCCcchh------------
Confidence            22             1245688889999754   11111 1346666665555554433  2222111            


Q ss_pred             hhHHHHHHHHHHHHhhhhccccccCcCC---ccccccccccCCCCchHHHHhhcCcce
Q 019481          224 ETWNNFLYLLLIATLLSTITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                             ......   ...........+   ..+...||+.||.+|||+++++++..-
T Consensus       258 -------~~~~~~---~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  305 (337)
T 3ll6_A          258 -------KLRIVN---GKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQE  305 (337)
T ss_dssp             ------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             -------HHHhhc---CcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence                   110000   000011111111   123447899999999999999887543

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=8.6e-35  Score=261.78  Aligned_cols=181  Identities=14%  Similarity=0.111  Sum_probs=137.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHH--HHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDD--GKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~--~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++  +++.||+|+++...    .+.+.  .|+..++.++||||+++++.+...  ...+....+++|||+
T Consensus        23 ~G~~g~Vy~~~~--~~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~--~~~~~~~~~lv~e~~   94 (336)
T 3g2f_A           23 RGRYGAVYKGSL--DERPVAVKVFSFAN----RQNFINEKNIYRVPLMEHDNIARFIVGDERV--TADGRMEYLLVMEYY   94 (336)
T ss_dssp             ECSSEEEEEEEE--TTEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEE--CTTSCEEEEEEECCC
T ss_pred             cCCCeEEEEEEE--CCeEEEEEEeeccc----hhhHHHHHHHHHHHhccCcchhhheeccccc--ccCCCceEEEEEecC
Confidence            589999999976  67899999996422    23333  444445668999999999755421  223444678999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCC---------ceecCCCCCCcEEecCCCceEEecccc
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEK---------QVIYRDFKAPNILLDETFKCNLSDFST  153 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~---------~iiHrDlKp~NILl~~~~~~kl~DFGl  153 (340)
                      ++|+|.+++....      .++..+..++.||++||+|||+  +         +|+||||||+|||++.++.+||+|||+
T Consensus        95 ~~g~L~~~l~~~~------~~~~~~~~i~~qi~~~L~~LH~--~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~  166 (336)
T 3g2f_A           95 PNGSLXKYLSLHT------SDWVSSCRLAHSVTRGLAYLHT--ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGL  166 (336)
T ss_dssp             TTCBHHHHHHHCC------BCHHHHHHHHHHHHHHHHHHHC--CBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTT
T ss_pred             CCCcHHHHHhhcc------cchhHHHHHHHHHHHHHHHHHh--hhccccccccceeecccccceEEEcCCCcEEEeeccc
Confidence            9999999997654      6899999999999999999999  6         899999999999999999999999999


Q ss_pred             ceeecccC---------CcceeeccceeeccCcccc-------chh-hhhHhHhCCccccccccc
Q 019481          154 AKVSAVEN---------ADLTALDTSSVSAQSGKTG-------MEM-KMAQLESGGWRAHDEAEK  201 (340)
Q Consensus       154 a~~~~~~~---------~~~~~~gt~~~~~p~~~~~-------~~~-~~~~~~s~g~~~~~~~~~  201 (340)
                      |+.+....         .....+||+.|+|||.+.+       ..+ ...|+|+.|...+.+.++
T Consensus       167 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g  231 (336)
T 3g2f_A          167 SMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR  231 (336)
T ss_dssp             CEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhc
Confidence            98765321         1224468999999975543       111 134677777766666444

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=7.4e-36  Score=263.05  Aligned_cols=232  Identities=10%  Similarity=-0.003  Sum_probs=163.3

Q ss_pred             CCcceEEEEEEcCCCC-------ceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeee
Q 019481            5 APSFSVLIHVPFPDDR-------DDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWK   77 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~-------~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~   77 (340)
                      .|+||.||+|++..++       +.||+|+++... ....+.+.+|++++++++||||+++++++..       ....++
T Consensus        18 ~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~~~l   89 (289)
T 4fvq_A           18 QGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-RNYSESFFEAASMMSKLSHKHLVLNYGVCVC-------GDENIL   89 (289)
T ss_dssp             EETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-GGGHHHHHHHHHHHHTSCCTTBCCEEEEECC-------TTCCEE
T ss_pred             cCCCceEEEEEEecccccccccchhhhhhhccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe-------CCCCEE
Confidence            5899999999998777       469999996432 3445778999999999999999999997653       335679


Q ss_pred             eeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCc--------eEEe
Q 019481           78 NKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFK--------CNLS  149 (340)
Q Consensus        78 ~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~--------~kl~  149 (340)
                      +|||+++|+|.+++.....    .+++..+..++.||++||+|||+  ++|+||||||+|||++.++.        +||+
T Consensus        90 v~e~~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~~L~~LH~--~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~  163 (289)
T 4fvq_A           90 VQEFVKFGSLDTYLKKNKN----CINILWKLEVAKQLAAAMHFLEE--NTLIHGNVCAKNILLIREEDRKTGNPPFIKLS  163 (289)
T ss_dssp             EEECCTTCBHHHHHHHTGG----GCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred             EEECCCCCCHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHhh--CCeECCCcCcceEEEecCCcccccccceeeec
Confidence            9999999999999987653    49999999999999999999999  88999999999999998887        9999


Q ss_pred             ccccceeecccCCcceeeccceeeccCccccchh--hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHH
Q 019481          150 DFSTAKVSAVENADLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWN  227 (340)
Q Consensus       150 DFGla~~~~~~~~~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (340)
                      |||+++.....   ....||+.|+|||.+.+...  ...|+|+.|...+.+.++                    +.+++.
T Consensus       164 Dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g--------------------~~~~~~  220 (289)
T 4fvq_A          164 DPGISITVLPK---DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG--------------------GDKPLS  220 (289)
T ss_dssp             CCCSCTTTSCH---HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTT--------------------TCCTTT
T ss_pred             cCcccccccCc---cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcC--------------------CCCCcc
Confidence            99998655332   23457777888864433111  123555555444444332                    111111


Q ss_pred             HHHHHHHHHHhhhhccccccCcCCc---cccccccccCCCCchHHHHhhcC
Q 019481          228 NFLYLLLIATLLSTITFLSALKITG---CKSEEGYKNNSSLNPICQIVNQH  275 (340)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~h  275 (340)
                      ............  ......+..+.   .+...||+.||.+|||+++++++
T Consensus       221 ~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          221 ALDSQRKLQFYE--DRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             TSCHHHHHHHHH--TTCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             ccchHHHHHHhh--ccCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            111110001000  01111111122   23447899999999999998875

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=2e-35  Score=257.92  Aligned_cols=178  Identities=16%  Similarity=0.137  Sum_probs=128.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc---hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP---LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||+|++.  ++.||+|+++....   ....+.+.+|++++++++||||+++++++.       +....+++|||
T Consensus        17 ~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------~~~~~~lv~e~   87 (271)
T 3dtc_A           17 IGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCL-------KEPNLCLVMEF   87 (271)
T ss_dssp             EETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEEC-------CC--CEEEEEC
T ss_pred             cCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe-------cCCceEEEEEc
Confidence            5899999999974  78899999875322   233467899999999999999999999765       33467799999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCc---eecCCCCCCcEEecC--------CCceEEec
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQ---VIYRDFKAPNILLDE--------TFKCNLSD  150 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~---iiHrDlKp~NILl~~--------~~~~kl~D  150 (340)
                      +++|+|.+++...      .+++..+..++.|+++||+|||+  ++   |+||||||+|||++.        ++.+||+|
T Consensus        88 ~~~~~L~~~~~~~------~~~~~~~~~i~~~l~~~l~~lH~--~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D  159 (271)
T 3dtc_A           88 ARGGPLNRVLSGK------RIPPDILVNWAVQIARGMNYLHD--EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD  159 (271)
T ss_dssp             CTTEEHHHHHTSS------CCCHHHHHHHHHHHHHHHHHHHH--SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred             CCCCCHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHh--CCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence            9999999999643      28999999999999999999999  77   999999999999986        77899999


Q ss_pred             cccceeecccCCcceeeccceeeccCccccchhh-hhHhHhCCcccccccc
Q 019481          151 FSTAKVSAVENADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAE  200 (340)
Q Consensus       151 FGla~~~~~~~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~  200 (340)
                      ||+++...... .....||+.|++|+.+.+..+. ..|+|+.|...+.+.+
T Consensus       160 fg~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~  209 (271)
T 3dtc_A          160 FGLAREWHRTT-KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLT  209 (271)
T ss_dssp             CCC--------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCccccccccc-ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHh
Confidence            99998765433 2345788888888643322211 2355555555444433

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.8e-35  Score=286.07  Aligned_cols=159  Identities=14%  Similarity=0.164  Sum_probs=128.4

Q ss_pred             CCCcceEEEEEEcC--CCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFP--DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~--~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ..|+||.||+|.+.  .++..||+|+++........+.+.+|+++|++++|||||++++++..        ...+++|||
T Consensus       345 G~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~--------~~~~lv~E~  416 (613)
T 2ozo_A          345 GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA--------EALMLVMEM  416 (613)
T ss_dssp             EECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES--------SSEEEEEEC
T ss_pred             ecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc--------CCeEEEEEe
Confidence            36899999999875  45667999999865444566789999999999999999999997642        247799999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+++.....    .+++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+|+.+....
T Consensus       417 ~~~g~L~~~l~~~~~----~l~~~~~~~i~~qi~~~L~~LH~--~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~  490 (613)
T 2ozo_A          417 AGGGPLHKFLVGKRE----EIPVSNVAELLHQVSMGMKYLEE--KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADD  490 (613)
T ss_dssp             CTTCBHHHHHTTCTT----TSCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC---
T ss_pred             CCCCcHHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHH--CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCC
Confidence            999999999976543    49999999999999999999999  889999999999999999999999999998765432


Q ss_pred             Ccc----eeeccceeeccC
Q 019481          162 ADL----TALDTSSVSAQS  176 (340)
Q Consensus       162 ~~~----~~~gt~~~~~p~  176 (340)
                      ...    ...+|..|+|||
T Consensus       491 ~~~~~~~~~~~~~~y~APE  509 (613)
T 2ozo_A          491 SYYTARSAGKWPLKWYAPE  509 (613)
T ss_dssp             -----------CCTTSCHH
T ss_pred             ceeeeccCCCCccceeCHh
Confidence            211    122345566664

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=1.7e-35  Score=269.49  Aligned_cols=189  Identities=14%  Similarity=0.118  Sum_probs=141.4

Q ss_pred             CCCcceEEEEEEcCCC-----CceEEEEEeeccCchh----------hHHHHHHHHHHhhhcCCCccccccccccccccc
Q 019481            4 SAPSFSVLIHVPFPDD-----RDDVMLKLHELITPLQ----------LRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICL   68 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~-----~~~vAiK~~~~~~~~~----------~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~   68 (340)
                      ..|+||.||+|++..+     ++.||+|++.......          ......+|+..++.++||||+++++++...   
T Consensus        44 G~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~---  120 (364)
T 3op5_A           44 GQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHD---  120 (364)
T ss_dssp             CCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEE---
T ss_pred             ecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeec---
Confidence            3689999999998765     5789999987533110          112234566677788899999999987643   


Q ss_pred             cCCcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEec--CCCce
Q 019481           69 TGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLD--ETFKC  146 (340)
Q Consensus        69 ~~~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~--~~~~~  146 (340)
                      ..+..+.+++|||+ +|+|.+++.....    .+++..++.++.||+.||+|||+  ++|+||||||+|||++  .++.+
T Consensus       121 ~~~~~~~~lv~e~~-g~~L~~~~~~~~~----~l~~~~~~~i~~qi~~~l~~lH~--~~iiHrDlkp~Nill~~~~~~~~  193 (364)
T 3op5_A          121 KNGKSYRFMIMDRF-GSDLQKIYEANAK----RFSRKTVLQLSLRILDILEYIHE--HEYVHGDIKASNLLLNYKNPDQV  193 (364)
T ss_dssp             ETTEEEEEEEEECE-EEEHHHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEEESSCTTCE
T ss_pred             cCCcceEEEEEeCC-CCCHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHH--CCeEEecCCHHHEEEecCCCCeE
Confidence            12345788999999 9999999987643    39999999999999999999999  8899999999999999  88999


Q ss_pred             EEeccccceeecccCCc--------ceeeccceeeccCccccchhh-hhHhHhCCcccccccccc
Q 019481          147 NLSDFSTAKVSAVENAD--------LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       147 kl~DFGla~~~~~~~~~--------~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~  202 (340)
                      ||+|||+|+.+......        ...+||+.|+||+.+.+..+. ..|+|+.|...+.+.++.
T Consensus       194 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~  258 (364)
T 3op5_A          194 YLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGH  258 (364)
T ss_dssp             EECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSC
T ss_pred             EEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCC
Confidence            99999999877553322        234588889998644433222 236666665555554444

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=1.1e-34  Score=271.15  Aligned_cols=154  Identities=17%  Similarity=0.166  Sum_probs=127.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|.+.  ++.||+|+++...   ..+.+.+|+++|++++||||+++++++..      +....+++|||+++
T Consensus       203 ~G~fg~V~~~~~~--~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~~~~~iv~e~~~~  271 (450)
T 1k9a_A          203 KGEFGDVMLGDYR--GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVE------EKGGLYIVTEYMAK  271 (450)
T ss_dssp             ECSSEEEEEEEET--TEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEEC------TTSCEEEEEECCTT
T ss_pred             CcCCeeEEEEEec--CCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEc------CCCceEEEEEecCC
Confidence            5899999999875  6789999997432   45678999999999999999999996532      33367899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCcc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADL  164 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~  164 (340)
                      |+|.++++..+.   ..+++..+..++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+++......  .
T Consensus       272 g~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~--~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~--~  344 (450)
T 1k9a_A          272 GSLVDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLEG--NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--D  344 (450)
T ss_dssp             CBHHHHHHHHCT---TTCCHHHHHHHHHHHHHHHHHHHH--TTEECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred             CcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHh--CCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc--c
Confidence            999999987654   347999999999999999999999  889999999999999999999999999998654322  2


Q ss_pred             eeeccceeeccC
Q 019481          165 TALDTSSVSAQS  176 (340)
Q Consensus       165 ~~~gt~~~~~p~  176 (340)
                      ...++..|+||+
T Consensus       345 ~~~~~~~y~aPE  356 (450)
T 1k9a_A          345 TGKLPVKWTAPE  356 (450)
T ss_dssp             --CCCTTTSCHH
T ss_pred             CCCCCcceeCHH
Confidence            335567777775

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=7.3e-35  Score=262.00  Aligned_cols=185  Identities=17%  Similarity=0.093  Sum_probs=141.9

Q ss_pred             CCcceEEEEEEcCCCCc-----eEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeee
Q 019481            5 APSFSVLIHVPFPDDRD-----DVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~-----~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      .|+||.||+|++..+++     .||+|+++........+.+.+|+++++++ +||||+++++++..       ....+++
T Consensus        56 ~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-------~~~~~lv  128 (333)
T 2i1m_A           56 AGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH-------GGPVLVI  128 (333)
T ss_dssp             ECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-------SSSCEEE
T ss_pred             cCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec-------CCceEEE
Confidence            58999999999876654     79999998655555677899999999999 89999999997653       3467799


Q ss_pred             eccccCCCHHHHhcccCCC---------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEe
Q 019481           79 KWLMQKKGLENVHIGEHPA---------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLS  149 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~---------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~  149 (340)
                      |||+++|+|.+++......         ....+++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+
T Consensus       129 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~--~~ivH~Dlkp~NIl~~~~~~~kl~  206 (333)
T 2i1m_A          129 TEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS--KNCIHRDVAARNVLLTNGHVAKIG  206 (333)
T ss_dssp             EECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGCEEEGGGEEEBC
T ss_pred             EecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc--CCcccCCcccceEEECCCCeEEEC
Confidence            9999999999999764210         01248999999999999999999999  889999999999999999999999


Q ss_pred             ccccceeecccCCc---ceeeccceeeccCccccchhh-hhHhHhCCcccccc
Q 019481          150 DFSTAKVSAVENAD---LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDE  198 (340)
Q Consensus       150 DFGla~~~~~~~~~---~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~  198 (340)
                      |||+++........   ....||+.|+||+...+..+. ..|+|+.|...+.+
T Consensus       207 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el  259 (333)
T 2i1m_A          207 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI  259 (333)
T ss_dssp             CCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHH
Confidence            99999876543321   233456678887533221111 23555555555444

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=1.7e-35  Score=265.57  Aligned_cols=242  Identities=14%  Similarity=0.010  Sum_probs=162.2

Q ss_pred             CCCcceEEEEEE-----cCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVP-----FPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~-----~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      ..|+||.||+|+     +..+++.||+|++...........+.+|+.++++++||||+++++++..       ....+++
T Consensus        39 g~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~~~lv  111 (327)
T 2yfx_A           39 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ-------SLPRFIL  111 (327)
T ss_dssp             C--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-------SSSCEEE
T ss_pred             cCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC-------CCCcEEE
Confidence            368899999999     5567889999999765555667789999999999999999999997653       3466799


Q ss_pred             eccccCCCHHHHhcccCCC--ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC---CCceEEecccc
Q 019481           79 KWLMQKKGLENVHIGEHPA--SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE---TFKCNLSDFST  153 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~---~~~~kl~DFGl  153 (340)
                      |||+++|+|.+++......  ....+++..++.++.||+.||.|||+  ++|+||||||+|||++.   +..+||+|||+
T Consensus       112 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~--~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~  189 (327)
T 2yfx_A          112 MELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE--NHFIHRDIAARNCLLTCPGPGRVAKIGDFGM  189 (327)
T ss_dssp             EECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEESCSSTTCCEEECCCHH
T ss_pred             EecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh--CCeecCcCCHhHEEEecCCCcceEEECcccc
Confidence            9999999999999876421  11248999999999999999999999  78999999999999984   44699999999


Q ss_pred             ceeecccC---CcceeeccceeeccCccccchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHH
Q 019481          154 AKVSAVEN---ADLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNF  229 (340)
Q Consensus       154 a~~~~~~~---~~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (340)
                      ++......   ......||+.|++|+...+..+ ...|+|+.|...+.+.+                    .+..+|...
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt--------------------~g~~p~~~~  249 (327)
T 2yfx_A          190 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--------------------LGYMPYPSK  249 (327)
T ss_dssp             HHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT--------------------TSCCSSTTC
T ss_pred             ccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHc--------------------CCCCCCCCc
Confidence            97554322   1223456777888753322111 12344444444433322                    022222211


Q ss_pred             HHHHHHHHhhhhccccccCcCCc-------cccccccccCCCCchHHHHhhcCcce
Q 019481          230 LYLLLIATLLSTITFLSALKITG-------CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~p~-------~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .......    .+.....+.++.       .+...||+.||.+||++++++++++.
T Consensus       250 ~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~  301 (327)
T 2yfx_A          250 SNQEVLE----FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY  301 (327)
T ss_dssp             CHHHHHH----HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CHHHHHH----HHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence            0000000    000111112222       22347899999999999999999887

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.5e-35  Score=262.64  Aligned_cols=232  Identities=16%  Similarity=0.087  Sum_probs=166.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCch-----hhHHHHHHHHHHhhhc----CCCccccccccccccccccCCccee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPL-----QLRRDDDGKLDSLEEI----FHPNQVKPSGYWSMNICLTGDRRYC   75 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~-----~~~~~~~~E~~~l~~l----~hpnIv~l~~~f~~~~~~~~~~~~~   75 (340)
                      .|+||.||+|++..+++.||+|+++.....     .....+.+|+++++++    +||||++++++|..       ....
T Consensus        41 ~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~-------~~~~  113 (312)
T 2iwi_A           41 KGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFET-------QEGF  113 (312)
T ss_dssp             EETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC------------C
T ss_pred             cCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEec-------CCeE
Confidence            589999999999999999999999753211     2234467899999999    89999999997653       3356


Q ss_pred             eeeecc-ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEec-CCCceEEecccc
Q 019481           76 WKNKWL-MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLD-ETFKCNLSDFST  153 (340)
Q Consensus        76 ~~~~e~-~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~-~~~~~kl~DFGl  153 (340)
                      ++++|+ +.+++|.+++.....     +++..++.++.||++||+|||+  ++|+||||||+||+++ .++.+||+|||+
T Consensus       114 ~~v~e~~~~~~~L~~~l~~~~~-----~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~Nil~~~~~~~~kl~dfg~  186 (312)
T 2iwi_A          114 MLVLERPLPAQDLFDYITEKGP-----LGEGPSRCFFGQVVAAIQHCHS--RGVVHRDIKDENILIDLRRGCAKLIDFGS  186 (312)
T ss_dssp             EEEEECCSSEEEHHHHHHHHCS-----CCHHHHHHHHHHHHHHHHHHHH--HTEECCCCSGGGEEEETTTTEEEECCCSS
T ss_pred             EEEEEecCCCCCHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeeecCCChhhEEEeCCCCeEEEEEcch
Confidence            788888 789999999988665     9999999999999999999999  7899999999999999 799999999999


Q ss_pred             ceeecccCCcceeeccceeeccCccccchhh--hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHH
Q 019481          154 AKVSAVENADLTALDTSSVSAQSGKTGMEMK--MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLY  231 (340)
Q Consensus       154 a~~~~~~~~~~~~~gt~~~~~p~~~~~~~~~--~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (340)
                      ++..... ......||..|++|+...+....  ..|+|+.|...+.+.++.  .|                   |.....
T Consensus       187 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~--~p-------------------f~~~~~  244 (312)
T 2iwi_A          187 GALLHDE-PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGD--IP-------------------FERDQE  244 (312)
T ss_dssp             CEECCSS-CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSS--CS-------------------CCSHHH
T ss_pred             hhhcccC-cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCC--CC-------------------CCChHH
Confidence            9877553 23455688888888543322221  245565555555444333  22                   211111


Q ss_pred             HHHHHHhhhhccccccCcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          232 LLLIATLLSTITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ..   ..  .  .......+   ..+...||+.||++|||++++++|||+.
T Consensus       245 ~~---~~--~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~  288 (312)
T 2iwi_A          245 IL---EA--E--LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQ  288 (312)
T ss_dssp             HH---HT--C--CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTC
T ss_pred             Hh---hh--c--cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhc
Confidence            10   00  0  00001111   1233478999999999999999999994

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=1.5e-34  Score=255.65  Aligned_cols=181  Identities=14%  Similarity=0.051  Sum_probs=144.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..+++.||+|++....   ..+.+.+|+++++++ +|+||+++++++.       +....++++||+ 
T Consensus        20 ~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~~~~l~~~~~i~~~~~~~~-------~~~~~~lv~e~~-   88 (298)
T 1csn_A           20 EGSFGVIFEGTNLLNNQQVAIKFEPRRS---DAPQLRDEYRTYKLLAGCTGIPNVYYFGQ-------EGLHNVLVIDLL-   88 (298)
T ss_dssp             ECSSCEEEEEEETTTTEEEEEEEEECCT---TSCCHHHHHHHHHHTTTCTTCCCEEEEEE-------ETTEEEEEEECC-
T ss_pred             ecCCEEEEEEEECCCCcEEEEEEeccCC---ccHHHHHHHHHHHHHhcCCCCCeEEeecC-------CCceeEEEEEec-
Confidence            6899999999999999999999986432   234578899999999 7999999999664       334678999999 


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCc-----eEEeccccceeec
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFK-----CNLSDFSTAKVSA  158 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~-----~kl~DFGla~~~~  158 (340)
                      +++|.+++.....    .+++..+..++.||+.||+|||+  ++|+||||||+|||++.++.     +||+|||+|+...
T Consensus        89 ~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~lH~--~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~  162 (298)
T 1csn_A           89 GPSLEDLLDLCGR----KFSVKTVAMAAKQMLARVQSIHE--KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR  162 (298)
T ss_dssp             CCBHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHT--TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred             CCCHHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence            8999999987653    39999999999999999999999  88999999999999988776     9999999998776


Q ss_pred             ccCC--------cceeeccceeeccCccccchhh-hhHhHhCCcccccccccc
Q 019481          159 VENA--------DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       159 ~~~~--------~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~  202 (340)
                      ....        .....||+.|+||+...+..+. ..|+|+.|...+.+.++.
T Consensus       163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~  215 (298)
T 1csn_A          163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGS  215 (298)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCC
Confidence            5422        2345688888888654432222 336666666666555444

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=5.4e-34  Score=255.70  Aligned_cols=160  Identities=19%  Similarity=0.213  Sum_probs=131.8

Q ss_pred             CCcceEEEEEE----cCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVP----FPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~----~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|+||.||+|+    +..+++.||+|++.... ....+.+.+|++++++++||||+++++++..     .+....++++|
T Consensus        51 ~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~~~lv~e  124 (326)
T 2w1i_A           51 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYS-----AGRRNLKLIME  124 (326)
T ss_dssp             CCSSEEEEEEEECTTSSSCCEEEEEEEESSCC-SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC---------CCEEEEC
T ss_pred             cCCCeEEEEEEeccccCCCceEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEe-----cCCCceEEEEE
Confidence            68999999998    56789999999997532 3455778999999999999999999996643     23346789999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      |+++|+|.+++.....    .+++..+..++.||++||+|||+  ++|+||||||+||+++.++++||+|||+++.....
T Consensus       125 ~~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~--~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~  198 (326)
T 2w1i_A          125 YLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD  198 (326)
T ss_dssp             CCTTCBHHHHHHHSTT----SSCHHHHHHHHHHHHHHHHHHHH--TTEECSCCCGGGEEEEETTEEEECCCTTCEECCSS
T ss_pred             CCCCCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHh--CCEeccCCCcceEEEcCCCcEEEecCcchhhcccc
Confidence            9999999999987653    39999999999999999999999  88999999999999999999999999999877554


Q ss_pred             CCc----ceeeccceeeccC
Q 019481          161 NAD----LTALDTSSVSAQS  176 (340)
Q Consensus       161 ~~~----~~~~gt~~~~~p~  176 (340)
                      ...    ....++..|+||+
T Consensus       199 ~~~~~~~~~~~~~~~y~aPE  218 (326)
T 2w1i_A          199 KEYYKVKEPGESPIFWYAPE  218 (326)
T ss_dssp             CSEEECSSCCSCCGGGCCHH
T ss_pred             ccccccccCCCCceeEECch
Confidence            321    2234555677774

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=1.1e-34  Score=262.75  Aligned_cols=180  Identities=16%  Similarity=0.139  Sum_probs=138.3

Q ss_pred             CCcceEEEEEEcCCCC-ceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCc------cccccccccccccccCCcceeee
Q 019481            5 APSFSVLIHVPFPDDR-DDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPN------QVKPSGYWSMNICLTGDRRYCWK   77 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~-~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpn------Iv~l~~~f~~~~~~~~~~~~~~~   77 (340)
                      .|+||.||+|++..++ +.||+|+++.  .....+.+.+|++++++++|++      ++.++++|..       ....++
T Consensus        29 ~G~~g~V~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~-------~~~~~l   99 (355)
T 2eu9_A           29 EGTFGKVVECLDHARGKSQVALKIIRN--VGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF-------HGHMCI   99 (355)
T ss_dssp             EETTEEEEEEEETTTTTEEEEEEEECS--CHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE-------TTEEEE
T ss_pred             ccCCeEEEEEEecCCCceEEEEEEEcc--cccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee-------CCeEEE
Confidence            5899999999998776 6899999963  3345567889999999998766      7888886653       336789


Q ss_pred             eeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEe-----------------
Q 019481           78 NKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILL-----------------  140 (340)
Q Consensus        78 ~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl-----------------  140 (340)
                      +|||+ +++|.+.+.....   ..+++..++.++.||+.||+|||+  ++|+||||||+|||+                 
T Consensus       100 v~e~~-~~~l~~~l~~~~~---~~~~~~~~~~i~~qi~~~L~~lH~--~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~  173 (355)
T 2eu9_A          100 AFELL-GKNTFEFLKENNF---QPYPLPHVRHMAYQLCHALRFLHE--NQLTHTDLKPENILFVNSEFETLYNEHKSCEE  173 (355)
T ss_dssp             EEECC-CCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHT--TTEECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred             EEecc-CCChHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEEecccccccccccccccc
Confidence            99999 5677777766542   349999999999999999999999  889999999999999                 


Q ss_pred             --cCCCceEEeccccceeecccCCcceeeccceeeccCccccchhh-hhHhHhCCccccccccc
Q 019481          141 --DETFKCNLSDFSTAKVSAVENADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEK  201 (340)
Q Consensus       141 --~~~~~~kl~DFGla~~~~~~~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~  201 (340)
                        +.++.+||+|||+++....  ......||+.|+|||.+.+..+. ..|+|+.|...+.+.++
T Consensus       174 ~~~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g  235 (355)
T 2eu9_A          174 KSVKNTSIRVADFGSATFDHE--HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG  235 (355)
T ss_dssp             EEESCCCEEECCCTTCEETTS--CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             cccCCCcEEEeecCccccccc--cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhC
Confidence              5688999999999986543  23456789999999644322211 23555555555554443

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=3e-35  Score=259.34  Aligned_cols=181  Identities=16%  Similarity=0.123  Sum_probs=131.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++..   .||+|+++.. ......+.+.+|++++++++||||++++++..        ....++++||++
T Consensus        34 ~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~~~~lv~e~~~  102 (289)
T 3og7_A           34 SGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST--------APQLAIVTQWCE  102 (289)
T ss_dssp             ECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC--------SSSCEEEEECCC
T ss_pred             CCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc--------CCccEEEEEecC
Confidence            58999999998753   4999999753 33455677999999999999999999998432        235679999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc---
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE---  160 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~---  160 (340)
                      +++|.+++.....    .+++..+..++.|++.||+|||+  ++|+||||||+|||++.++++||+|||+++.....   
T Consensus       103 ~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~~L~~lH~--~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  176 (289)
T 3og7_A          103 GSSLYHHLHASET----KFEMKKLIDIARQTARGMDYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS  176 (289)
T ss_dssp             EEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred             CCcHHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHh--CCcccccCccceEEECCCCCEEEccceecccccccccc
Confidence            9999999976554    49999999999999999999999  88999999999999999999999999999865432   


Q ss_pred             CCcceeeccceeeccCccc---cch-hhhhHhHhCCcccccccccc
Q 019481          161 NADLTALDTSSVSAQSGKT---GME-MKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~---~~~-~~~~~~~s~g~~~~~~~~~~  202 (340)
                      .......||+.|++|+.+.   +.. -...|+|+.|...+.+.++.
T Consensus       177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~  222 (289)
T 3og7_A          177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ  222 (289)
T ss_dssp             -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSS
T ss_pred             ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCC
Confidence            2223456888888886442   111 11346666666665554443

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.3e-34  Score=257.89  Aligned_cols=180  Identities=15%  Similarity=0.100  Sum_probs=135.4

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhh--cCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEE--IFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~--l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++.  ++.||+|++...    ......+|.+++..  ++||||+++++++....   .+....+++|||+
T Consensus        47 ~G~~g~V~~~~~~--~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~---~~~~~~~lv~e~~  117 (337)
T 3mdy_A           47 KGRYGEVWMGKWR--GEKVAVKVFFTT----EEASWFRETEIYQTVLMRHENILGFIAADIKGT---GSWTQLYLITDYH  117 (337)
T ss_dssp             EETTEEEEEEEET--TEEEEEEEEEGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC---GGGCEEEEEECCC
T ss_pred             cCCCeEEEEEEEC--CceEEEEEEecc----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC---CCCCceEEEEecc
Confidence            5899999999975  789999999632    22334555555555  48999999999765331   1224788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCC--------ceecCCCCCCcEEecCCCceEEeccccc
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEK--------QVIYRDFKAPNILLDETFKCNLSDFSTA  154 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~--------~iiHrDlKp~NILl~~~~~~kl~DFGla  154 (340)
                      ++|+|.++++...      +++..+..++.|++.||+|||+  +        +|+||||||+|||++.++++||+|||+|
T Consensus       118 ~~g~L~~~l~~~~------~~~~~~~~i~~~i~~~l~~lH~--~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a  189 (337)
T 3mdy_A          118 ENGSLYDYLKSTT------LDAKSMLKLAYSSVSGLCHLHT--EIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  189 (337)
T ss_dssp             TTCBHHHHHHHCC------BCHHHHHHHHHHHHHHHHHHHS--CBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             CCCcHHHHhhccC------CCHHHHHHHHHHHHHHHHHHHH--hhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCc
Confidence            9999999997642      8999999999999999999999  6        8999999999999999999999999999


Q ss_pred             eeecccCCc-----ceeeccceeeccCccccchhh-------hhHhHhCCccccccccc
Q 019481          155 KVSAVENAD-----LTALDTSSVSAQSGKTGMEMK-------MAQLESGGWRAHDEAEK  201 (340)
Q Consensus       155 ~~~~~~~~~-----~~~~gt~~~~~p~~~~~~~~~-------~~~~~s~g~~~~~~~~~  201 (340)
                      +........     .+.+||+.|+|||.+.+....       ..|+|+.|...+.+.++
T Consensus       190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg  248 (337)
T 3mdy_A          190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR  248 (337)
T ss_dssp             EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhc
Confidence            876543322     245789999999643321111       14666666666555444

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=8.7e-35  Score=262.89  Aligned_cols=187  Identities=13%  Similarity=0.091  Sum_probs=138.9

Q ss_pred             CCCcceEEEEEEcCC---CCceEEEEEeeccCchh----------hHHHHHHHHHHhhhcCCCccccccccccccccccC
Q 019481            4 SAPSFSVLIHVPFPD---DRDDVMLKLHELITPLQ----------LRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTG   70 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~---~~~~vAiK~~~~~~~~~----------~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~   70 (340)
                      ..|+||.||+|++..   ++..+|+|+........          ..+.+.+|+..++.++||||+++++++...   ..
T Consensus        46 g~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~---~~  122 (345)
T 2v62_A           46 GSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTE---FK  122 (345)
T ss_dssp             ------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEE---SS
T ss_pred             eecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccc---cC
Confidence            368999999999987   78899999987533211          123466888999999999999999987642   13


Q ss_pred             CcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC--ceEE
Q 019481           71 DRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF--KCNL  148 (340)
Q Consensus        71 ~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~--~~kl  148 (340)
                      +..+.+++|||+ +++|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++  .+||
T Consensus       123 ~~~~~~lv~e~~-~~~L~~~l~~~~~-----~~~~~~~~i~~qi~~aL~~LH~--~~ivH~Dlkp~NIll~~~~~~~~kL  194 (345)
T 2v62_A          123 GRSYRFMVMERL-GIDLQKISGQNGT-----FKKSTVLQLGIRMLDVLEYIHE--NEYVHGDIKAANLLLGYKNPDQVYL  194 (345)
T ss_dssp             SCEEEEEEEECE-EEEHHHHCBGGGB-----CCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEEESSSTTSEEE
T ss_pred             CCcEEEEEEecc-CCCHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCeeCCCcCHHHEEEccCCCCcEEE
Confidence            456889999999 8999999987665     9999999999999999999999  8899999999999999877  9999


Q ss_pred             eccccceeecccCC--------cceeeccceeeccCccccchhh-hhHhHhCCccccccccc
Q 019481          149 SDFSTAKVSAVENA--------DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEK  201 (340)
Q Consensus       149 ~DFGla~~~~~~~~--------~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~  201 (340)
                      +|||+|+.+.....        .....||+.|+||+...+..+. ..|+|+.|...+.+.++
T Consensus       195 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g  256 (345)
T 2v62_A          195 ADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCG  256 (345)
T ss_dssp             CCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred             EeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhC
Confidence            99999987754321        1345688888888543332211 23555555555444443

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=2.7e-35  Score=275.52  Aligned_cols=156  Identities=18%  Similarity=0.196  Sum_probs=123.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|.+..+ ..||+|+++...  ...+.+.+|+++|++++||||+++++++..        ...+++|||+++
T Consensus       194 ~G~fg~Vy~~~~~~~-~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--------~~~~iv~e~~~~  262 (452)
T 1fmk_A          194 QGCFGEVWMGTWNGT-TRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--------EPIYIVTEYMSK  262 (452)
T ss_dssp             ECSSCEEEEEEETTT-EEEEEEECCTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS--------SSCEEEECCCTT
T ss_pred             CCCCeEEEEEEECCC-ceEEEEEeccCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC--------CceEEEehhhcC
Confidence            589999999998654 569999997532  234678999999999999999999996532        357799999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC--
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA--  162 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~--  162 (340)
                      |+|.++++....   ..+++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++.......  
T Consensus       263 gsL~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~--~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~  337 (452)
T 1fmk_A          263 GSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVER--MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA  337 (452)
T ss_dssp             CBHHHHHSHHHH---TTCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred             CCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHh--CCeeCCCCChhhEEECCCCCEEECCCccceecCCCceec
Confidence            999999986422   248999999999999999999999  8899999999999999999999999999987654321  


Q ss_pred             cceeeccceeeccC
Q 019481          163 DLTALDTSSVSAQS  176 (340)
Q Consensus       163 ~~~~~gt~~~~~p~  176 (340)
                      .....++..|+||+
T Consensus       338 ~~~~~~~~~y~aPE  351 (452)
T 1fmk_A          338 RQGAKFPIKWTAPE  351 (452)
T ss_dssp             -----CCGGGSCHH
T ss_pred             ccCCcccccccCHh
Confidence            11223455677764

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=6.7e-35  Score=253.88  Aligned_cols=156  Identities=17%  Similarity=0.170  Sum_probs=129.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++. +++.||+|++....  ...+.+.+|++++++++||||+++++++..       ....++++||+++
T Consensus        18 ~G~~g~V~~~~~~-~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~~lv~e~~~~   87 (267)
T 3t9t_A           18 SGQFGLVHLGYWL-NKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-------QAPICLVTEFMEH   87 (267)
T ss_dssp             EETTEEEEEEEET-TTEEEEEEEECTTT--BCHHHHHHHHHHHHTCCCTTBCCEEEEECS-------SSSCEEEECCCTT
T ss_pred             CCCceeEEEEEec-CCCeEEEEEccccC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEcc-------CCCeEEEEeCCCC
Confidence            5899999999986 56789999997532  234678999999999999999999997653       3467799999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC--C
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN--A  162 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--~  162 (340)
                      |+|.+++.....    .+++..+..++.|+++||+|||+  ++|+||||||+||+++.++.+||+|||+++......  .
T Consensus        88 ~~L~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~  161 (267)
T 3t9t_A           88 GCLSDYLRTQRG----LFAAETLLGMCLDVCEGMAYLEE--ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS  161 (267)
T ss_dssp             CBHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHH--TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS
T ss_pred             CcHHHHHhhCcc----cCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCchheEEECCCCCEEEcccccccccccccccc
Confidence            999999987643    38999999999999999999999  889999999999999999999999999998654321  1


Q ss_pred             cceeeccceeeccC
Q 019481          163 DLTALDTSSVSAQS  176 (340)
Q Consensus       163 ~~~~~gt~~~~~p~  176 (340)
                      .....+|..|++|+
T Consensus       162 ~~~~~~~~~y~aPE  175 (267)
T 3t9t_A          162 STGTKFPVKWASPE  175 (267)
T ss_dssp             TTSTTCCGGGCCHH
T ss_pred             cccccccccccChh
Confidence            12234566677774

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=9.9e-35  Score=254.60  Aligned_cols=156  Identities=17%  Similarity=0.193  Sum_probs=127.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++. +++.||+|.++...  ...+.+.+|++++++++||||+++++++..        ..+++++||+++
T Consensus        23 ~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--------~~~~~v~e~~~~   91 (279)
T 1qpc_A           23 AGQFGEVWMGYYN-GHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ--------EPIYIITEYMEN   91 (279)
T ss_dssp             EETTEEEEEEEET-TTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS--------SSCEEEEECCTT
T ss_pred             CCCCeEEEEEEEc-CCcEEEEEEecCCc--ccHHHHHHHHHHHHhCCCcCcceEEEEEcC--------CCcEEEEecCCC
Confidence            5899999999975 56779999997432  235678999999999999999999996542        247799999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC--
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA--  162 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~--  162 (340)
                      |+|.+++.....   ..+++..+..++.|+++||+|||+  ++|+||||||+||+++.++.+||+|||+++.......  
T Consensus        92 ~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~--~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  166 (279)
T 1qpc_A           92 GSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA  166 (279)
T ss_dssp             CBHHHHTTSHHH---HTCCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEEC
T ss_pred             CCHHHHHhcCCC---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHhhEEEcCCCCEEECCCcccccccCccccc
Confidence            999999986542   248999999999999999999999  8899999999999999999999999999987754321  


Q ss_pred             cceeeccceeeccC
Q 019481          163 DLTALDTSSVSAQS  176 (340)
Q Consensus       163 ~~~~~gt~~~~~p~  176 (340)
                      .....++..|++|+
T Consensus       167 ~~~~~~~~~y~aPE  180 (279)
T 1qpc_A          167 REGAKFPIKWTAPE  180 (279)
T ss_dssp             CTTCCCCTTTSCHH
T ss_pred             ccCCCCccCccChh
Confidence            11223455666664

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=5.1e-34  Score=253.93  Aligned_cols=185  Identities=18%  Similarity=0.163  Sum_probs=132.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc--CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI--TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|.+..+++.||+|++...  ......+.+.+|++++++++||||++++++|..       ....++++||+
T Consensus        42 ~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~~~~~lv~e~~  114 (310)
T 2wqm_A           42 RGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-------DNELNIVLELA  114 (310)
T ss_dssp             CC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-------TTEEEEEEECC
T ss_pred             CCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-------CCcEEEEEecC
Confidence            689999999999999999999999752  234556778999999999999999999997653       33678999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-  161 (340)
                      ++|+|.+++..... ....+++..+..++.||+.||+|||+  ++|+||||||+||+++.++.+||+|||+++...... 
T Consensus       115 ~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~--~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~  191 (310)
T 2wqm_A          115 DAGDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMHS--RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT  191 (310)
T ss_dssp             CSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCGGGEEECTTSCEEECCC-----------
T ss_pred             CCCCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHhh--CCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc
Confidence            99999999875211 01248999999999999999999999  889999999999999999999999999998765432 


Q ss_pred             CcceeeccceeeccCccccchhh-hhHhHhCCccccccc
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEA  199 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~  199 (340)
                      ......||+.|++|+...+..+. ..|+|+.|...+.+.
T Consensus       192 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~  230 (310)
T 2wqm_A          192 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMA  230 (310)
T ss_dssp             -------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHH
Confidence            22345678888888633221111 235555444444443

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=3e-34  Score=261.32  Aligned_cols=160  Identities=12%  Similarity=0.013  Sum_probs=129.1

Q ss_pred             CCcceEEEEEE-----cCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC---CCccccccccccccccccCCcceee
Q 019481            5 APSFSVLIHVP-----FPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF---HPNQVKPSGYWSMNICLTGDRRYCW   76 (340)
Q Consensus         5 ~G~fg~V~~~~-----~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~l~~~f~~~~~~~~~~~~~~   76 (340)
                      .|+||.||+|+     +..+++.||+|+++..    ....+.+|+++++.++   |+||+++++++.       +.+..+
T Consensus        75 ~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~-------~~~~~~  143 (365)
T 3e7e_A           75 EGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHL-------FQNGSV  143 (365)
T ss_dssp             ECSSEEEEEEEC-------CCCCEEEEEESSC----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEE-------CSSCEE
T ss_pred             ccCCEEEEEEEecCCcccccCcEEEEEEeCCC----ChhHHHHHHHHHHHhhhhhhhhhhhhheeee-------cCCCcE
Confidence            58999999994     6778999999999643    2345677888888776   999999999665       334677


Q ss_pred             eeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC-----------CCc
Q 019481           77 KNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE-----------TFK  145 (340)
Q Consensus        77 ~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~-----------~~~  145 (340)
                      ++|||+++|+|.+++..........+++..++.++.||+.||+|||+  ++|+||||||+|||++.           ++.
T Consensus       144 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~--~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~  221 (365)
T 3e7e_A          144 LVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD--CEIIHGDIKPDNFILGNGFLEQDDEDDLSAG  221 (365)
T ss_dssp             EEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT--TTEECCCCSGGGEEECGGGTCC------CTT
T ss_pred             EEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh--CCeecCCCCHHHEEecccccCccccccccCC
Confidence            99999999999999985322112349999999999999999999999  77999999999999998           899


Q ss_pred             eEEeccccceeecc---cCCcceeeccceeeccCc
Q 019481          146 CNLSDFSTAKVSAV---ENADLTALDTSSVSAQSG  177 (340)
Q Consensus       146 ~kl~DFGla~~~~~---~~~~~~~~gt~~~~~p~~  177 (340)
                      +||+|||+|+.+..   .......+||+.|+|||.
T Consensus       222 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~  256 (365)
T 3e7e_A          222 LALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEM  256 (365)
T ss_dssp             EEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHH
T ss_pred             EEEeeCchhhhhhccCCCceeeeecCCCCCCChHH
Confidence            99999999987643   223345679999999963

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=4.5e-34  Score=252.30  Aligned_cols=182  Identities=18%  Similarity=0.132  Sum_probs=143.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|++....   ..+.+.+|++++++++|++++..++++.      .+....+++|||+ +
T Consensus        19 ~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~~~~~i~~~~~~~------~~~~~~~lv~e~~-~   88 (296)
T 4hgt_A           19 SGSFGDIYLGTDIAAGEEVAIKLECVKT---KHPQLHIESKIYKMMQGGVGIPTIRWCG------AEGDYNVMVMELL-G   88 (296)
T ss_dssp             ECSSSEEEEEEETTTTEEEEEEEEEC------CCCHHHHHHHHHHHTTSTTCCCEEEEE------EETTEEEEEEECC-C
T ss_pred             CCCCeEEEEEEEcCCCceEEEEeecccc---cchHHHHHHHHHHHhcCCCCCCeeeeec------CCCCceEEEEEcc-C
Confidence            5899999999999999999999976422   2345789999999999999888777543      2344778999999 8


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEe---cCCCceEEeccccceeecccC
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILL---DETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl---~~~~~~kl~DFGla~~~~~~~  161 (340)
                      |+|.+++.....    .+++..+..++.||+.||+|||+  ++|+||||||+|||+   +.++.+||+|||+++......
T Consensus        89 ~~L~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~LH~--~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~  162 (296)
T 4hgt_A           89 PSLEDLFNFCSR----KFSLKTVLLLADQMISRIEYIHS--KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR  162 (296)
T ss_dssp             CBHHHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred             CCHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcc
Confidence            999999986543    39999999999999999999999  889999999999999   789999999999998776543


Q ss_pred             C--------cceeeccceeeccCccccchhh-hhHhHhCCcccccccccc
Q 019481          162 A--------DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       162 ~--------~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~  202 (340)
                      .        .....||+.|++|+...+..+. ..|+|+.|...+.+.++.
T Consensus       163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  212 (296)
T 4hgt_A          163 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGS  212 (296)
T ss_dssp             TCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             cCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCC
Confidence            2        2345788889988644432222 336777666666555544

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=3.6e-35  Score=272.77  Aligned_cols=236  Identities=19%  Similarity=0.118  Sum_probs=155.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||+|+.. ...+++.||+|++....    .....+|+++|+++ +|||||++++++.       +....+++||||.
T Consensus        34 ~G~~G~V~~~-~~~~~~~vAvK~~~~~~----~~~~~~E~~~l~~l~~HpnIv~l~~~~~-------~~~~~~lv~E~~~  101 (432)
T 3p23_A           34 HGAEGTIVYR-GMFDNRDVAVKRILPEC----FSFADREVQLLRESDEHPNVIRYFCTEK-------DRQFQYIAIELCA  101 (432)
T ss_dssp             ECGGGCEEEE-EESSSSEEEEEEECTTT----EEECHHHHHHHHHSCCCTTBCCEEEEEE-------ETTEEEEEEECCS
T ss_pred             cCcCEEEEEE-EEeCCeEEEEEEECHHH----HHHHHHHHHHHHhccCCCCcCeEEEEEe-------cCCEEEEEEECCC
Confidence            5899986533 33567899999996422    23357899999999 7999999999665       3447789999996


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC-----CCceEEeccccceeec
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE-----TFKCNLSDFSTAKVSA  158 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~-----~~~~kl~DFGla~~~~  158 (340)
                       |+|.+++.....    .+++..+..++.||++||+|||+  ++|+||||||+|||++.     ..++||+|||+|+...
T Consensus       102 -g~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~--~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~  174 (432)
T 3p23_A          102 -ATLQEYVEQKDF----AHLGLEPITLLQQTTSGLAHLHS--LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA  174 (432)
T ss_dssp             -EEHHHHHHSSSC----CCCSSCHHHHHHHHHHHHHHHHH--TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred             -CCHHHHHHhcCC----CccchhHHHHHHHHHHHHHHHHH--CcCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence             599999987654    25666778999999999999999  78999999999999953     2358899999998776


Q ss_pred             ccC----CcceeeccceeeccCccccc---h-hhhhHhHhCCcccccccc-ccccCCCCCCcccccCCCccC----Cchh
Q 019481          159 VEN----ADLTALDTSSVSAQSGKTGM---E-MKMAQLESGGWRAHDEAE-KAFQWPYKSSHLKNTRPNLKT----ENET  225 (340)
Q Consensus       159 ~~~----~~~~~~gt~~~~~p~~~~~~---~-~~~~~~~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~----~~~~  225 (340)
                      ...    .....+||+.|+|||.+.+.   . -...|+|+.|...+.+.+ +.  .||...........+..    ...+
T Consensus       175 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~--~pf~~~~~~~~~~~~~~~~~~~~~~  252 (432)
T 3p23_A          175 VGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGS--HPFGKSLQRQANILLGACSLDCLHP  252 (432)
T ss_dssp             -----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSC--BTTBSTTTHHHHHHTTCCCCTTSCT
T ss_pred             CCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCC--CCcchhhHHHHHHHhccCCccccCc
Confidence            432    23446789999999755421   1 113466666665555433 33  23221111000000000    0000


Q ss_pred             HHHHHHHHHHHHhhhhccccccCcCCccccccccccCCCCchHHHHhhcCccee
Q 019481          226 WNNFLYLLLIATLLSTITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      .......                  ..++...||+.||.+|||++++++|||+.
T Consensus       253 ~~~~~~~------------------~~~li~~~L~~dP~~Rps~~evl~hp~f~  288 (432)
T 3p23_A          253 EKHEDVI------------------ARELIEKMIAMDPQKRPSAKHVLKHPFFW  288 (432)
T ss_dssp             TCHHHHH------------------HHHHHHHHSCSSGGGSCCHHHHHTSTTTC
T ss_pred             cccccHH------------------HHHHHHHHHhCCHhhCCCHHHHHhCcccc
Confidence            0000000                  01234478999999999999999999993

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=1e-33  Score=255.34  Aligned_cols=180  Identities=16%  Similarity=0.133  Sum_probs=142.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhh--cCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEE--IFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~--l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++  +++.||+|+++.    ...+.+.+|.++++.  ++||||+++++++....   ......++++||+
T Consensus        52 ~G~~g~Vy~~~~--~~~~vavK~~~~----~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~---~~~~~~~lv~e~~  122 (342)
T 1b6c_B           52 KGRFGEVWRGKW--RGEEVAVKIFSS----REERSWFREAEIYQTVMLRHENILGFIAADNKDN---GTWTQLWLVSDYH  122 (342)
T ss_dssp             EETTEEEEEEEE--TTEEEEEEEECG----GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC---SSCCCEEEEECCC
T ss_pred             CCCCcEEEEEEE--cCccEEEEEeCc----hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC---CccceeEEEEeec
Confidence            589999999997  488999999963    234567889999888  78999999999775331   1113678999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhh--------cCCCceecCCCCCCcEEecCCCceEEeccccc
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLH--------SSEKQVIYRDFKAPNILLDETFKCNLSDFSTA  154 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH--------~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla  154 (340)
                      ++|+|.+++....      +++..++.++.|++.||+|||        +  ++|+||||||+|||++.++++||+|||++
T Consensus       123 ~~g~L~~~l~~~~------~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~--~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~  194 (342)
T 1b6c_B          123 EHGSLFDYLNRYT------VTVEGMIKLALSTASGLAHLHMEIVGTQGK--PAIAHRDLKSKNILVKKNGTCCIADLGLA  194 (342)
T ss_dssp             TTCBHHHHHHHCC------BCHHHHHHHHHHHHHHHHHHHCCBCSTTCB--CEEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred             CCCcHHHHHhccC------ccHHHHHHHHHHHHHHHHHHHHHHhhhccc--CCeeeCCCCHHHEEECCCCCEEEEECCCc
Confidence            9999999997642      899999999999999999999        8  88999999999999999999999999999


Q ss_pred             eeecccCC-----cceeeccceeeccCccccc------hh-hhhHhHhCCccccccccc
Q 019481          155 KVSAVENA-----DLTALDTSSVSAQSGKTGM------EM-KMAQLESGGWRAHDEAEK  201 (340)
Q Consensus       155 ~~~~~~~~-----~~~~~gt~~~~~p~~~~~~------~~-~~~~~~s~g~~~~~~~~~  201 (340)
                      +.......     .....||+.|+|||...+.      .. ...|+|+.|...+.+.++
T Consensus       195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg  253 (342)
T 1b6c_B          195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR  253 (342)
T ss_dssp             EEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhc
Confidence            87765432     2345789999999654432      11 234677766666665443

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=8.7e-34  Score=252.23  Aligned_cols=180  Identities=24%  Similarity=0.208  Sum_probs=133.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++.  ++.||+|.+..   ....+.+.+|++++++++||||+++++++.+         ..+++|||+++
T Consensus        18 ~G~~g~V~~~~~~--~~~vavK~~~~---~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---------~~~lv~e~~~~   83 (307)
T 2eva_A           18 RGAFGVVCKAKWR--AKDVAIKQIES---ESERKAFIVELRQLSRVNHPNIVKLYGACLN---------PVCLVMEYAEG   83 (307)
T ss_dssp             CCSSSEEEEEEET--TEEEEEEECSS---TTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT---------TTEEEEECCTT
T ss_pred             cCCCceEEEEEEC--CeeEEEEEecC---hhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC---------CcEEEEEcCCC
Confidence            6899999999874  67899999963   3345678999999999999999999996642         25689999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCC-CceecCCCCCCcEEecCCCc-eEEeccccceeecccCC
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSE-KQVIYRDFKAPNILLDETFK-CNLSDFSTAKVSAVENA  162 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~-~~iiHrDlKp~NILl~~~~~-~kl~DFGla~~~~~~~~  162 (340)
                      |+|.+++.....  ...+++..+..++.|+++||+|||+.. ++|+||||||+|||++.++. +||+|||+++.....  
T Consensus        84 ~~L~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--  159 (307)
T 2eva_A           84 GSLYNVLHGAEP--LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--  159 (307)
T ss_dssp             CBHHHHHHCSSS--EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred             CCHHHHHhccCC--CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence            999999987654  134789999999999999999999922 45999999999999998886 799999999765432  


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCcccccccccc
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~  202 (340)
                      .....||+.|+|||...+..+. ..|+|+.|...+.+.++.
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~  200 (307)
T 2eva_A          160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRR  200 (307)
T ss_dssp             -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTC
T ss_pred             cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence            2344688889888644332221 235555555555544433

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=6.9e-34  Score=264.64  Aligned_cols=238  Identities=15%  Similarity=0.115  Sum_probs=151.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||+||.+. ..+++.||+|++..    ...+.+.+|+++++++ +||||+++++++.       +....+++|||+.
T Consensus        25 ~G~~g~V~~~~-~~~g~~vAvK~~~~----~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~-------~~~~~~lv~E~~~   92 (434)
T 2rio_A           25 YGSSGTVVFQG-SFQGRPVAVKRMLI----DFCDIALMEIKLLTESDDHPNVIRYYCSET-------TDRFLYIALELCN   92 (434)
T ss_dssp             ECSTTCEEEEE-ESSSSEEEEEEEEG----GGHHHHHHHHHHHHHHTTSTTBCCEEEEEE-------CSSEEEEEECCCS
T ss_pred             eCCCeEEEEEE-EECCeEEEEEEEcH----HHHHHHHHHHHHHHhccCCCCcCeEEEEEe-------cCCeEEEEEecCC
Confidence            58999998653 45688999999863    2235578999999987 8999999999664       4457889999996


Q ss_pred             CCCHHHHhcccCCCcc--ccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCC-------------CceEE
Q 019481           84 KKGLENVHIGEHPASV--RQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDET-------------FKCNL  148 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~-------------~~~kl  148 (340)
                       |+|.+++........  ...++..++.++.||+.||+|||+  ++|+||||||+|||++.+             +++||
T Consensus        93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~--~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL  169 (434)
T 2rio_A           93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI  169 (434)
T ss_dssp             -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEE
T ss_pred             -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH--CCccccCCChHhEEEecCcccccccccCCCceEEEE
Confidence             699999987654100  001333467899999999999999  889999999999999754             48999


Q ss_pred             eccccceeecccCC-----cceeeccceeeccCccccc--------hhhhhHhHhCCcccccccc-ccccCCCCCCcccc
Q 019481          149 SDFSTAKVSAVENA-----DLTALDTSSVSAQSGKTGM--------EMKMAQLESGGWRAHDEAE-KAFQWPYKSSHLKN  214 (340)
Q Consensus       149 ~DFGla~~~~~~~~-----~~~~~gt~~~~~p~~~~~~--------~~~~~~~~s~g~~~~~~~~-~~~~~~~~~~~~~~  214 (340)
                      +|||+|+.......     ....+||+.|+|||...+.        --...|+|+.|...+.+.+ +.  .||...... 
T Consensus       170 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~--~Pf~~~~~~-  246 (434)
T 2rio_A          170 SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK--HPFGDKYSR-  246 (434)
T ss_dssp             CCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSC--CTTCSTTTH-
T ss_pred             cccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCC--CCCCCchhh-
Confidence            99999998765432     2245788888888644321        0112355555555444432 22  222111000 


Q ss_pred             cCCCccCCchhHHHHHHHHHHHHhhhhccccccCcC-----C---ccccccccccCCCCchHHHHhhcCccee
Q 019481          215 TRPNLKTENETWNNFLYLLLIATLLSTITFLSALKI-----T---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       215 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                                      ..   ............+.+     +   .++...||+.||.+|||++++++|||+.
T Consensus       247 ----------------~~---~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~  300 (434)
T 2rio_A          247 ----------------ES---NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFW  300 (434)
T ss_dssp             ----------------HH---HHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred             ----------------HH---HHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccC
Confidence                            00   000000000000000     0   1234478999999999999999999993

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=3.2e-34  Score=279.14  Aligned_cols=158  Identities=18%  Similarity=0.123  Sum_probs=129.3

Q ss_pred             CCcceEEEEEEcCCC---CceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDD---RDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~---~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||.||+|++..+   +..||+|.++........+.+.+|+.++++++||||+++++++..        +..+++|||
T Consensus       400 ~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~--------~~~~lv~E~  471 (656)
T 2j0j_A          400 EGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE--------NPVWIIMEL  471 (656)
T ss_dssp             CCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--------SSCEEEEEC
T ss_pred             eCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec--------CceEEEEEc
Confidence            689999999998653   457999998765555566789999999999999999999996632        256799999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+++.....    .+++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+|+......
T Consensus       472 ~~~g~L~~~l~~~~~----~l~~~~~~~i~~qi~~aL~~LH~--~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~  545 (656)
T 2j0j_A          472 CTLGELRSFLQVRKF----SLDLASLILYAYQLSTALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST  545 (656)
T ss_dssp             CTTCBHHHHHHHTTT----TCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC--
T ss_pred             CCCCcHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHh--CCccccccchHhEEEeCCCCEEEEecCCCeecCCCc
Confidence            999999999986553    38999999999999999999999  889999999999999999999999999998765432


Q ss_pred             C--cceeeccceeeccC
Q 019481          162 A--DLTALDTSSVSAQS  176 (340)
Q Consensus       162 ~--~~~~~gt~~~~~p~  176 (340)
                      .  .....+|+.|+|||
T Consensus       546 ~~~~~~~~~t~~y~aPE  562 (656)
T 2j0j_A          546 YYKASKGKLPIKWMAPE  562 (656)
T ss_dssp             --------CCGGGCCHH
T ss_pred             ceeccCCCCCcceeCHH
Confidence            2  12234566777774

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=1.1e-34  Score=276.69  Aligned_cols=156  Identities=19%  Similarity=0.206  Sum_probs=127.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+ ..||+|+++...  ...+.+.+|+++|++++||||+++++++..        ...+++|||+++
T Consensus       277 ~G~fg~Vy~~~~~~~-~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--------~~~~lv~e~~~~  345 (535)
T 2h8h_A          277 QGCFGEVWMGTWNGT-TRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--------EPIYIVTEYMSK  345 (535)
T ss_dssp             ECSSEEEEEEEETTT-EEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS--------SSCEEEECCCTT
T ss_pred             cCCCeEEEEEEECCC-ceEEEEEeCCCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEee--------ccceEeeehhcC
Confidence            589999999998654 569999997532  234678999999999999999999996532        357799999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC--C
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN--A  162 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--~  162 (340)
                      |+|.++++....   ..+++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++......  .
T Consensus       346 gsL~~~l~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~--~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  420 (535)
T 2h8h_A          346 GSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVER--MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA  420 (535)
T ss_dssp             EEHHHHHSHHHH---TTCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHT
T ss_pred             CcHHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHHHh--CCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceec
Confidence            999999986422   248999999999999999999999  889999999999999999999999999998764321  1


Q ss_pred             cceeeccceeeccC
Q 019481          163 DLTALDTSSVSAQS  176 (340)
Q Consensus       163 ~~~~~gt~~~~~p~  176 (340)
                      .....++..|+|||
T Consensus       421 ~~~~~~~~~y~aPE  434 (535)
T 2h8h_A          421 RQGAKFPIKWTAPE  434 (535)
T ss_dssp             TCSTTSCGGGSCHH
T ss_pred             ccCCcCcccccCHH
Confidence            11223455666664

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=5.6e-34  Score=279.46  Aligned_cols=234  Identities=13%  Similarity=0.051  Sum_probs=168.0

Q ss_pred             CCcceEEEEEEcCC-CCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPD-DRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~-~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||.||+|++.. +++.||+|++.........+.+.+|++++++++||||++++++|.....  ......|+||||++
T Consensus        90 ~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~~~~~~lv~E~~~  167 (681)
T 2pzi_A           90 HGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDR--HGDPVGYIVMEYVG  167 (681)
T ss_dssp             EETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECT--TSCEEEEEEEECCC
T ss_pred             eCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCC--CCCceeEEEEEeCC
Confidence            58999999999976 7899999998755455566778999999999999999999998875432  12223689999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      |++|.+.+..  .     +++..++.++.||++||.|||+  ++|+||||||+|||++.+ .+||+|||+++.....   
T Consensus       168 g~~L~~~~~~--~-----l~~~~~~~~~~qi~~aL~~lH~--~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~---  234 (681)
T 2pzi_A          168 GQSLKRSKGQ--K-----LPVAEAIAYLLEILPALSYLHS--IGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF---  234 (681)
T ss_dssp             CEECC----C--C-----CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC---
T ss_pred             CCcHHHHHhC--C-----CCHHHHHHHHHHHHHHHHHHHH--CCCeecccChHHeEEeCC-cEEEEecccchhcccC---
Confidence            9999988765  3     8999999999999999999999  889999999999999875 9999999999876543   


Q ss_pred             ceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhcc
Q 019481          164 LTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTIT  243 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  243 (340)
                      ....||+.|++||.+.+......|+|+.|...+.+.++.  .++.....    ..+....+........           
T Consensus       235 ~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~--~~~~~~~~----~~~~~~~~~~~~~~~l-----------  297 (681)
T 2pzi_A          235 GYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDL--PTRNGRYV----DGLPEDDPVLKTYDSY-----------  297 (681)
T ss_dssp             SCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCC--CEETTEEC----SSCCTTCHHHHHCHHH-----------
T ss_pred             CccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCC--CCCccccc----ccccccccccccCHHH-----------
Confidence            456799999999854433233456676666665554332  22222111    1111111111100010           


Q ss_pred             ccccCcCCccccccccccCCCCchHHHHhhcCcce
Q 019481          244 FLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       244 ~~~~~~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                              ..+...||+.||.+||+..+.+.|+|.
T Consensus       298 --------~~li~~~l~~dP~~R~~~~~~l~~~l~  324 (681)
T 2pzi_A          298 --------GRLLRRAIDPDPRQRFTTAEEMSAQLT  324 (681)
T ss_dssp             --------HHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             --------HHHHhhhccCChhhCCCHHHHHHHHHH
Confidence                    123447889999999987777777765

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=9.6e-35  Score=263.32  Aligned_cols=184  Identities=14%  Similarity=0.079  Sum_probs=136.7

Q ss_pred             CCcceEEEEEEcCCC--------CceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccc---------c
Q 019481            5 APSFSVLIHVPFPDD--------RDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNI---------C   67 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~--------~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~---------~   67 (340)
                      .|+||.||+|++..+        ++.||+|++...      +.+.+|++++++++||||+++++.+....         .
T Consensus        52 ~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~  125 (352)
T 2jii_A           52 RDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGF  125 (352)
T ss_dssp             EETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEE
T ss_pred             CCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccCCccCccchhhc
Confidence            588999999999874        889999999743      35789999999999999998554332110         1


Q ss_pred             ccCCcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC--c
Q 019481           68 LTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF--K  145 (340)
Q Consensus        68 ~~~~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~--~  145 (340)
                      ...+....+++|||+ +|+|.+++.....   ..+++..++.++.||+.||+|||+  ++|+||||||+|||++.++  .
T Consensus       126 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~--~~ivH~Dikp~NIl~~~~~~~~  199 (352)
T 2jii_A          126 GVHQDKYRFLVLPSL-GRSLQSALDVSPK---HVLSERSVLQVACRLLDALEFLHE--NEYVHGNVTAENIFVDPEDQSQ  199 (352)
T ss_dssp             EEETTTEEEEEEECC-CEEHHHHHHHSGG---GCCCHHHHHHHHHHHHHHHHHHHH--TTCBCSCCCGGGEEEETTEEEE
T ss_pred             cccCCcEEEEEecCC-CcCHHHHHHhCCc---CCCCHHHHHHHHHHHHHHHHHHHh--CCccCCCCCHHHEEEcCCCCce
Confidence            112345788999999 9999999987622   349999999999999999999999  8899999999999999998  9


Q ss_pred             eEEeccccceeecccCCc--------ceeeccceeeccCccccchhh-hhHhHhCCcccccccc
Q 019481          146 CNLSDFSTAKVSAVENAD--------LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAE  200 (340)
Q Consensus       146 ~kl~DFGla~~~~~~~~~--------~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~  200 (340)
                      +||+|||+++.+......        ....||+.|++|+.+.+..+. ..|+|+.|...+.+.+
T Consensus       200 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~  263 (352)
T 2jii_A          200 VTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLY  263 (352)
T ss_dssp             EEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHh
Confidence            999999999876543221        234678888888544332221 2355555555544433

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=1.1e-33  Score=249.92  Aligned_cols=182  Identities=18%  Similarity=0.135  Sum_probs=143.4

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|++.....   .+.+.+|+++++.++|++++..+.++.      .+....++++||+ +
T Consensus        19 ~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~~~~~i~~~~~~~------~~~~~~~lv~e~~-~   88 (296)
T 3uzp_A           19 SGSFGDIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGIPTIRWCG------AEGDYNVMVMELL-G   88 (296)
T ss_dssp             EETTEEEEEEEETTTTEEEEEEEEESCSS---CCHHHHHHHHHHHHTTSTTCCCEEEEE------EETTEEEEEEECC-C
T ss_pred             cCCCeEEEEEEEcCCCcEEEEEEecCCcc---hhHHHHHHHHHHHhhcCCCCCcccccc------CCCCceEEEEEec-C
Confidence            58999999999999999999999875322   245889999999999998887776443      2344778999999 8


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEe---cCCCceEEeccccceeecccC
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILL---DETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl---~~~~~~kl~DFGla~~~~~~~  161 (340)
                      ++|.+++.....    .+++..+..++.||+.||+|||+  ++|+||||||+|||+   +.++.+||+|||+++......
T Consensus        89 ~~L~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~--~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~  162 (296)
T 3uzp_A           89 PSLEDLFNFCSR----KFSLKTVLLLADQMISRIEYIHS--KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR  162 (296)
T ss_dssp             CBHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHH--TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred             CCHHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHh--CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccc
Confidence            999999985443    39999999999999999999999  889999999999999   478999999999998776543


Q ss_pred             C--------cceeeccceeeccCccccchhh-hhHhHhCCcccccccccc
Q 019481          162 A--------DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       162 ~--------~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~  202 (340)
                      .        .....||+.|+||+...+..+. ..|+|+.|...+.+.++.
T Consensus       163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  212 (296)
T 3uzp_A          163 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGS  212 (296)
T ss_dssp             TCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             cccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCC
Confidence            2        2355788888888644432222 336666666666555444

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=4.6e-34  Score=250.27  Aligned_cols=176  Identities=16%  Similarity=0.136  Sum_probs=129.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|.+.  ++.||+|+++..   ...+.+.+|++++++++||||+++++++.      .+....++++||+++
T Consensus        31 ~G~~g~V~~~~~~--~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------~~~~~~~lv~e~~~~   99 (278)
T 1byg_A           31 KGEFGDVMLGDYR--GNKVAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIV------EEKGGLYIVTEYMAK   99 (278)
T ss_dssp             ECSSCEEEEEEET--TEEEEEEECCCC---C--HHHHHTHHHHTTCCCTTBCCEEEEEC------CC--CCEEEECCCTT
T ss_pred             cCCCceEEEEEEc--CCEEEEEEecch---hHHHHHHHHHHHHHhCCCCCEeeEEEEEE------cCCCceEEEEecCCC
Confidence            5899999999874  788999999743   24567899999999999999999999653      233467899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCcc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADL  164 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~  164 (340)
                      |+|.+++.....   ..+++..+..++.|++.||+|||+  ++|+||||||+||+++.++.+||+|||+++......  .
T Consensus       100 ~~L~~~l~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~--~  172 (278)
T 1byg_A          100 GSLVDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLEG--NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--D  172 (278)
T ss_dssp             EEHHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred             CCHHHHHHhccc---ccCCHHHHHHHHHHHHHHHHHHHh--CCccccCCCcceEEEeCCCcEEEeeccccccccccc--c
Confidence            999999986543   348999999999999999999999  889999999999999999999999999998654432  2


Q ss_pred             eeeccceeeccCccccchhh-hhHhHhCCcccccc
Q 019481          165 TALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDE  198 (340)
Q Consensus       165 ~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~  198 (340)
                      ...+++.|++|+...+..+. ..|+|+.|...+.+
T Consensus       173 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  207 (278)
T 1byg_A          173 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI  207 (278)
T ss_dssp             ---CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCccccccCHHHhCCCCCCchhcHHHHHHHHHHH
Confidence            33567777777533221111 23555555544444

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=3.2e-34  Score=252.74  Aligned_cols=160  Identities=15%  Similarity=0.094  Sum_probs=121.5

Q ss_pred             CCCcceEEEEEEcCC-CC--ceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeee
Q 019481            4 SAPSFSVLIHVPFPD-DR--DDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~-~~--~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      ..|+||.||+|++.. ++  ..||+|+++...  .....+.+.+|++++++++||||+++++++...        ..+++
T Consensus        27 g~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--------~~~~v   98 (291)
T 1u46_A           27 GDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP--------PMKMV   98 (291)
T ss_dssp             C----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS--------SCEEE
T ss_pred             cCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC--------Cceee
Confidence            368999999998643 33  368999987532  234567789999999999999999999977532        36689


Q ss_pred             eccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeec
Q 019481           79 KWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      +||+++|+|.+++.....    .+++..+..++.||++||+|||+  ++|+||||||+||+++.++.+||+|||+++...
T Consensus        99 ~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~  172 (291)
T 1u46_A           99 TELAPLGSLLDRLRKHQG----HFLLGTLSRYAVQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALP  172 (291)
T ss_dssp             EECCTTCBHHHHHHHHGG----GSCHHHHHHHHHHHHHHHHHHHH--TTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred             EecccCCCHHHHHHhccC----CcCHHHHHHHHHHHHHHHHHHHh--CCcccCCCchheEEEcCCCCEEEcccccccccc
Confidence            999999999999987543    49999999999999999999999  889999999999999999999999999998775


Q ss_pred             ccCCc----ceeeccceeeccCc
Q 019481          159 VENAD----LTALDTSSVSAQSG  177 (340)
Q Consensus       159 ~~~~~----~~~~gt~~~~~p~~  177 (340)
                      .....    ....+|..|++|+.
T Consensus       173 ~~~~~~~~~~~~~~~~~y~aPE~  195 (291)
T 1u46_A          173 QNDDHYVMQEHRKVPFAWCAPES  195 (291)
T ss_dssp             C-CCEEEC-----CCGGGCCHHH
T ss_pred             ccccchhhhccCCCCceeeCchh
Confidence            54321    22345666777743

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=1.6e-33  Score=260.59  Aligned_cols=245  Identities=10%  Similarity=-0.024  Sum_probs=158.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCC-Ccccccccc--------------------
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFH-PNQVKPSGY--------------------   61 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~h-pnIv~l~~~--------------------   61 (340)
                      .|+||.||+|++..+++.||+|+++...  .....+.+.+|+.+++.++| +|......+                    
T Consensus        88 ~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (413)
T 3dzo_A           88 QEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIR  167 (413)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC------
T ss_pred             cCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCCcccc
Confidence            5899999999999999999999987422  22335778999999999987 332221111                    


Q ss_pred             -ccccccccCCcceeeeeeccccCCCHHHHhcccC--CCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcE
Q 019481           62 -WSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEH--PASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNI  138 (340)
Q Consensus        62 -f~~~~~~~~~~~~~~~~~e~~~~gsL~~~l~~~~--~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NI  138 (340)
                       +....  .......+++|+.+ +++|.+++....  ......+++..+..++.||++||+|||+  ++|+||||||+||
T Consensus       168 ~~~~~~--~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~--~~iiHrDiKp~NI  242 (413)
T 3dzo_A          168 VRLDER--DMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH--YGLVHTYLRPVDI  242 (413)
T ss_dssp             -----------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH--TTEECSCCCGGGE
T ss_pred             ccCCCc--cccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCcccceE
Confidence             00000  00011244556655 579999985210  0001358899999999999999999999  8899999999999


Q ss_pred             EecCCCceEEeccccceeecccCCcceeeccceeeccCccccc----------hhh-hhHhHhCCccccccccccccCCC
Q 019481          139 LLDETFKCNLSDFSTAKVSAVENADLTALDTSSVSAQSGKTGM----------EMK-MAQLESGGWRAHDEAEKAFQWPY  207 (340)
Q Consensus       139 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~gt~~~~~p~~~~~~----------~~~-~~~~~s~g~~~~~~~~~~~~~~~  207 (340)
                      |++.++.+||+|||+++.....  ..+.+| +.|+|||.+.+.          .+. ..|+|+.|...+.+.++.  .||
T Consensus       243 Ll~~~~~~kL~DFG~a~~~~~~--~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~--~Pf  317 (413)
T 3dzo_A          243 VLDQRGGVFLTGFEHLVRDGAS--AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD--LPN  317 (413)
T ss_dssp             EECTTCCEEECCGGGCEETTEE--ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSS--CCC
T ss_pred             EEecCCeEEEEeccceeecCCc--cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCC--CCC
Confidence            9999999999999999876543  344567 778887544110          011 346777666666655544  343


Q ss_pred             CCCcccccCCCccCCchhHHHHHHHHHHHHhhhhccccccCcCCccccccccccCCCCchHHHHhhcCcceee
Q 019481          208 KSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       208 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                      ...........+.......+...                     ..+...||+.||.+||++.++++|||+..
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~---------------------~~li~~~l~~dP~~Rpt~~~~l~~~~~~~  369 (413)
T 3dzo_A          318 TDDAALGGSEWIFRSCKNIPQPV---------------------RALLEGFLRYPKEDRLLPLQAMETPEYEQ  369 (413)
T ss_dssp             CTTGGGSCSGGGGSSCCCCCHHH---------------------HHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             CCcchhhhHHHHHhhcccCCHHH---------------------HHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence            33322222211111111111100                     12234788999999999999999999943

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.98  E-value=1.2e-32  Score=258.68  Aligned_cols=182  Identities=18%  Similarity=0.159  Sum_probs=141.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|+++....   .+.+.+|+++++.++|++++..+.+|.      .+..+.+++|||+ +
T Consensus        17 ~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~~~~E~~il~~L~~~~~i~~i~~~~------~~~~~~~lvme~~-g   86 (483)
T 3sv0_A           17 SGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLLYESKIYRILQGGTGIPNVRWFG------VEGDYNVLVMDLL-G   86 (483)
T ss_dssp             ECSSCEEEEEEETTTCCEEEEEEEETTCS---SCCHHHHHHHHHHTTTSTTCCCEEEEE------EETTEEEEEEECC-C
T ss_pred             eCCCEEEEEEEECCCCcEEEEEEeccccc---cHHHHHHHHHHHHhcCCCCCCeEEEEE------eeCCEEEEEEECC-C
Confidence            58999999999999999999999875332   245789999999999866555554432      2344778999999 8


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEe---cCCCceEEeccccceeecccC
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILL---DETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl---~~~~~~kl~DFGla~~~~~~~  161 (340)
                      ++|.+++.....    .+++..++.++.||+.||+|||+  ++|+||||||+|||+   +.++.+||+|||+|+.+....
T Consensus        87 ~sL~~ll~~~~~----~l~~~~~~~i~~qi~~aL~yLH~--~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~  160 (483)
T 3sv0_A           87 PSLEDLFNFCSR----KLSLKTVLMLADQMINRVEFVHS--KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS  160 (483)
T ss_dssp             CBHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred             CCHHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHH--CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCc
Confidence            999999986543    39999999999999999999999  889999999999999   688999999999999876543


Q ss_pred             Cc--------ceeeccceeeccCccccchhh-hhHhHhCCcccccccccc
Q 019481          162 AD--------LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       162 ~~--------~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~  202 (340)
                      ..        ...+||+.|++|+.+.+.++. ..|+|+.|...+.+.++.
T Consensus       161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~  210 (483)
T 3sv0_A          161 THQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGS  210 (483)
T ss_dssp             TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             cccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCC
Confidence            22        256788889888654433322 236666666666555544

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.98  E-value=3.2e-33  Score=267.49  Aligned_cols=174  Identities=11%  Similarity=0.002  Sum_probs=125.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC---------chhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcce
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT---------PLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRY   74 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~---------~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~   74 (340)
                      .|+.|.+..++..-.|+.+|+|++.+..         .....+++.+|+++|+++ +|+||++++++|+       +...
T Consensus       244 ~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~e-------d~~~  316 (569)
T 4azs_A          244 AGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGE-------NAQS  316 (569)
T ss_dssp             --------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEE-------CSSE
T ss_pred             cCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEE-------ECCE
Confidence            4556666666666678999999997521         223456799999999999 6999999999876       4457


Q ss_pred             eeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccc
Q 019481           75 CWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTA  154 (340)
Q Consensus        75 ~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla  154 (340)
                      .|+||||++||+|.++|...+.     +++.   .|+.||+.||+|+|+  +|||||||||+|||++.+|++||+|||+|
T Consensus       317 ~yLVMEyv~G~~L~d~i~~~~~-----l~~~---~I~~QIl~AL~ylH~--~GIIHRDIKPeNILL~~dg~vKL~DFGlA  386 (569)
T 4azs_A          317 GWLVMEKLPGRLLSDMLAAGEE-----IDRE---KILGSLLRSLAALEK--QGFWHDDVRPWNVMVDARQHARLIDFGSI  386 (569)
T ss_dssp             EEEEEECCCSEEHHHHHHTTCC-----CCHH---HHHHHHHHHHHHHHH--TTCEESCCCGGGEEECTTSCEEECCCTTE
T ss_pred             EEEEEecCCCCcHHHHHHhCCC-----CCHH---HHHHHHHHHHHHHHH--CCceeccCchHhEEECCCCCEEEeecccC
Confidence            8899999999999999998765     7764   588999999999999  88999999999999999999999999999


Q ss_pred             eeeccc-CCcceeeccceeeccCccccchhhhhHhHhCCccc
Q 019481          155 KVSAVE-NADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRA  195 (340)
Q Consensus       155 ~~~~~~-~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~  195 (340)
                      +..... ....+.+||+.|++||...+......++|+.|...
T Consensus       387 r~~~~~~~~~~t~vGTp~YmAPE~l~g~~~~~~d~~s~g~~~  428 (569)
T 4azs_A          387 VTTPQDCSWPTNLVQSFFVFVNELFAENKSWNGFWRSAPVHP  428 (569)
T ss_dssp             ESCC---CCSHHHHHHHHHHHHHHC-----------------
T ss_pred             eeCCCCCccccCceechhhccHHHhCCCCCCcccccccccch
Confidence            977553 34556789999999976554332233444444333

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.97  E-value=1.5e-32  Score=241.71  Aligned_cols=157  Identities=10%  Similarity=-0.016  Sum_probs=132.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|++....  .....+.+.+|++++++++||||+++++++..       .+..+++|||+
T Consensus        41 ~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-------~~~~~lv~e~~  113 (286)
T 3uqc_A           41 GVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT-------RAGGLVVAEWI  113 (286)
T ss_dssp             BSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-------TTEEEEEEECC
T ss_pred             ccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE-------CCcEEEEEEec
Confidence            5889999999999999999999998632  23455778999999999999999999997753       34678999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      +|++|.++++..       ....++..++.||+.||+|||+  ++|+||||||+|||++.+|.+||+++|...       
T Consensus       114 ~g~~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH~--~givH~Dikp~NIll~~~g~~kl~~~~~~~-------  177 (286)
T 3uqc_A          114 RGGSLQEVADTS-------PSPVGAIRAMQSLAAAADAAHR--AGVALSIDHPSRVRVSIDGDVVLAYPATMP-------  177 (286)
T ss_dssp             CEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCSGGGEEEETTSCEEECSCCCCT-------
T ss_pred             CCCCHHHHHhcC-------CChHHHHHHHHHHHHHHHHHHH--CCCccCCCCcccEEEcCCCCEEEEeccccC-------
Confidence            999999999642       3555788999999999999999  889999999999999999999999776541       


Q ss_pred             cceeeccceeeccCccccchhhhhHhHhCC
Q 019481          163 DLTALDTSSVSAQSGKTGMEMKMAQLESGG  192 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g  192 (340)
                              .+....|+||.|+++++++++.
T Consensus       178 --------~~~~~~Di~slG~il~elltg~  199 (286)
T 3uqc_A          178 --------DANPQDDIRGIGASLYALLVNR  199 (286)
T ss_dssp             --------TCCHHHHHHHHHHHHHHHHHSE
T ss_pred             --------CCCchhHHHHHHHHHHHHHHCC
Confidence                    1444568888888888888743

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.97  E-value=1.4e-33  Score=251.97  Aligned_cols=181  Identities=15%  Similarity=0.112  Sum_probs=135.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ..|+||.||+|++..   .+|+|+++... .....+.+.+|++++++++||||+++++++.       +....++++||+
T Consensus        42 g~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-------~~~~~~iv~e~~  111 (319)
T 2y4i_B           42 GKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM-------SPPHLAIITSLC  111 (319)
T ss_dssp             CCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEE-------CSSCEEEECBCC
T ss_pred             ccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEe-------cCCceEEEeecc
Confidence            368999999998753   49999987532 2233456788999999999999999999765       334678999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc--
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE--  160 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~--  160 (340)
                      ++++|.+++.....    .+++..+..++.||+.||+|||+  ++|+||||||+|||++ ++.+||+|||+++.....  
T Consensus       112 ~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~al~~lH~--~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~  184 (319)
T 2y4i_B          112 KGRTLYSVVRDAKI----VLDVNKTRQIAQEIVKGMGYLHA--KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQA  184 (319)
T ss_dssp             CSEEHHHHTTSSCC----CCCSHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSTTEEEC---CCEECCCSCCC-------
T ss_pred             cCCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHh--CCccccCCChhhEEEe-CCCEEEeecCCccccccccc
Confidence            99999999987653    38999999999999999999999  8899999999999998 789999999998765321  


Q ss_pred             ----CCcceeeccceeeccCccccch----------hhhhHhHhCCccccccccc
Q 019481          161 ----NADLTALDTSSVSAQSGKTGME----------MKMAQLESGGWRAHDEAEK  201 (340)
Q Consensus       161 ----~~~~~~~gt~~~~~p~~~~~~~----------~~~~~~~s~g~~~~~~~~~  201 (340)
                          .......||+.|++|+...+..          -...|+|+.|...+.+.++
T Consensus       185 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g  239 (319)
T 2y4i_B          185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAR  239 (319)
T ss_dssp             ---CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHS
T ss_pred             cccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhC
Confidence                2223345788888886443210          1124666655555554443

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.93  E-value=1.4e-26  Score=220.42  Aligned_cols=147  Identities=16%  Similarity=0.084  Sum_probs=113.9

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc-------hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP-------LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCW   76 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-------~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~   76 (340)
                      ..|+||.||+|.  ..++.+|+|.......       ....+.+.+|++++++++||||+++..++.       +....+
T Consensus       345 G~G~fg~Vy~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~-------~~~~~~  415 (540)
T 3en9_A          345 GKGAEADIKRDS--YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDV-------DLDNKR  415 (540)
T ss_dssp             ---CCEEEEEEE--CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEE-------ETTTTE
T ss_pred             eeCCCEEEEEEE--ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEE-------eCCccE
Confidence            369999999995  3467788887643211       112455899999999999999995544332       222457


Q ss_pred             eeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481           77 KNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus        77 ~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      ++|||++||+|.+++..             +..++.|+++||+|||+  ++|+||||||+|||++.  ++||+|||+|+.
T Consensus       416 lVmE~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~--~gIiHrDiKp~NILl~~--~~kL~DFGla~~  478 (540)
T 3en9_A          416 IMMSYINGKLAKDVIED-------------NLDIAYKIGEIVGKLHK--NDVIHNDLTTSNFIFDK--DLYIIDFGLGKI  478 (540)
T ss_dssp             EEEECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHH--TTEECTTCCTTSEEESS--SEEECCCTTCEE
T ss_pred             EEEECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHH--CcCccCCCCHHHEEECC--eEEEEECccCEE
Confidence            99999999999999875             45799999999999999  88999999999999998  999999999998


Q ss_pred             ecccCC--------cceeeccceeeccC
Q 019481          157 SAVENA--------DLTALDTSSVSAQS  176 (340)
Q Consensus       157 ~~~~~~--------~~~~~gt~~~~~p~  176 (340)
                      ......        ..+.+||+.|++|+
T Consensus       479 ~~~~~~~~~~~~~~~~~~~GT~~y~APE  506 (540)
T 3en9_A          479 SNLDEDKAVDLIVFKKAVLSTHHEKFDE  506 (540)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHCGGGHHH
T ss_pred             CCCccccccchhhhhhhhcCCCCcCCHH
Confidence            765332        13567888888883

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.91  E-value=1.9e-24  Score=189.35  Aligned_cols=126  Identities=12%  Similarity=0.097  Sum_probs=102.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCch-----------------hhHHHHHHHHHHhhhcCCCcccccccccccccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPL-----------------QLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNIC   67 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~-----------------~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~   67 (340)
                      .|+||.||+|++ .+++.||+|+++.....                 .....+.+|++++++++  | +++.+++..   
T Consensus       100 ~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~~---  172 (282)
T 1zar_A          100 EGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYAW---  172 (282)
T ss_dssp             ECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEEE---
T ss_pred             cCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEec---
Confidence            589999999999 88999999999642211                 13466889999999999  5 677775432   


Q ss_pred             ccCCcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceE
Q 019481           68 LTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCN  147 (340)
Q Consensus        68 ~~~~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~k  147 (340)
                           +..+++|||++||+|.+ +..           .....++.|+++||+|||+  ++|+||||||+|||++ ++.+|
T Consensus       173 -----~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH~--~giiHrDlkp~NILl~-~~~vk  232 (282)
T 1zar_A          173 -----EGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFYH--RGIVHGDLSQYNVLVS-EEGIW  232 (282)
T ss_dssp             -----ETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHHH--TTEECSCCSTTSEEEE-TTEEE
T ss_pred             -----cceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHHH--CCCEeCCCCHHHEEEE-CCcEE
Confidence                 25679999999999998 432           1244699999999999999  7799999999999999 99999


Q ss_pred             Eeccccceee
Q 019481          148 LSDFSTAKVS  157 (340)
Q Consensus       148 l~DFGla~~~  157 (340)
                      |+|||+|+..
T Consensus       233 l~DFG~a~~~  242 (282)
T 1zar_A          233 IIDFPQSVEV  242 (282)
T ss_dssp             ECCCTTCEET
T ss_pred             EEECCCCeEC
Confidence            9999999753

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.87  E-value=2.9e-22  Score=173.32  Aligned_cols=131  Identities=14%  Similarity=0.087  Sum_probs=100.5

Q ss_pred             CCCcceEEEEEEcCCCCce--EEEEEeeccCch-----------------------hhHHHHHHHHHHhhhcCCCccc--
Q 019481            4 SAPSFSVLIHVPFPDDRDD--VMLKLHELITPL-----------------------QLRRDDDGKLDSLEEIFHPNQV--   56 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~--vAiK~~~~~~~~-----------------------~~~~~~~~E~~~l~~l~hpnIv--   56 (340)
                      +.|+||.||+|.+..+|+.  ||+|+++.....                       .....+.+|+++|+++.|++|.  
T Consensus        56 g~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p  135 (258)
T 1zth_A           56 STGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAGVSVP  135 (258)
T ss_dssp             EECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             eecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence            3699999999998778888  999997542110                       1123578999999999988652  


Q ss_pred             cccccccccccccCCcceeeeeeccccC-C----CHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhh-cCCCceec
Q 019481           57 KPSGYWSMNICLTGDRRYCWKNKWLMQK-K----GLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLH-SSEKQVIY  130 (340)
Q Consensus        57 ~l~~~f~~~~~~~~~~~~~~~~~e~~~~-g----sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH-~~~~~iiH  130 (340)
                      ..++.           ...+++|||+.+ |    +|.+....        .++..+..++.|++.||.||| +  .+|+|
T Consensus       136 ~~~~~-----------~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~--~givH  194 (258)
T 1zth_A          136 QPYTY-----------MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQE--AELVH  194 (258)
T ss_dssp             CEEEE-----------ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHT--SCEEC
T ss_pred             eEEEc-----------CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHH--CCEEe
Confidence            22221           145699999942 4    67666432        234567899999999999999 9  77999


Q ss_pred             CCCCCCcEEecCCCceEEeccccceee
Q 019481          131 RDFKAPNILLDETFKCNLSDFSTAKVS  157 (340)
Q Consensus       131 rDlKp~NILl~~~~~~kl~DFGla~~~  157 (340)
                      |||||+|||++.  .++|+|||+|...
T Consensus       195 rDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          195 ADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             SSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             CCCCHHHEEEcC--cEEEEECcccccC
Confidence            999999999988  9999999999765

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.75  E-value=4.4e-19  Score=159.72  Aligned_cols=139  Identities=12%  Similarity=-0.080  Sum_probs=89.3

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc-------------hhhHHHHHHHHHHhhhcCCCccccccccccccccccC
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP-------------LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTG   70 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-------------~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~   70 (340)
                      +.|+||.||+|.+. +|+.||+|+++....             .........+.++.....|+|+.+++.........+.
T Consensus       104 G~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~p~~  182 (397)
T 4gyi_A          104 GVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPEPIA  182 (397)
T ss_dssp             EECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCEEE
T ss_pred             eeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCeeee
Confidence            46999999999985 588899999863110             0001112222233333334444444332111000000


Q ss_pred             CcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC------
Q 019481           71 DRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF------  144 (340)
Q Consensus        71 ~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~------  144 (340)
                      . ...+++|||++|++|.++..         .  ..+..++.||+.+|.|||+  .+||||||||.|||++.+|      
T Consensus       183 ~-~~~~LVME~i~G~~L~~l~~---------~--~~~~~l~~qll~~l~~lH~--~gIVHrDLKp~NILl~~dgd~~d~~  248 (397)
T 4gyi_A          183 Q-SRHTIVMSLVDALPMRQVSS---------V--PDPASLYADLIALILRLAK--HGLIHGDFNEFNILIREEKDAEDPS  248 (397)
T ss_dssp             E-ETTEEEEECCSCEEGGGCCC---------C--SCHHHHHHHHHHHHHHHHH--TTEECSCCSTTSEEEEEEECSSCTT
T ss_pred             c-cCceEEEEecCCccHhhhcc---------c--HHHHHHHHHHHHHHHHHHH--CCCcCCCCCHHHEEEeCCCCccccc
Confidence            0 12358999999988866532         1  2345688999999999999  7799999999999998876      


Q ss_pred             ----ceEEeccccceee
Q 019481          145 ----KCNLSDFSTAKVS  157 (340)
Q Consensus       145 ----~~kl~DFGla~~~  157 (340)
                          .+.|+||+-+...
T Consensus       249 ~~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          249 SITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             SEEEEEEECCCTTCEET
T ss_pred             ccccceEEEEeCCcccC
Confidence                3899999987653

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.33  E-value=5.1e-12  Score=108.58  Aligned_cols=129  Identities=15%  Similarity=0.058  Sum_probs=92.8

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCc--cccccccccccccccCCcceeeeeecc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPN--QVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpn--Iv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      ++|..+.||++.. .+++.+++|+....    ....+.+|+++++.+.+.+  +.++++++.       +.+..+++||+
T Consensus        29 ~gg~~~~v~~~~~-~~g~~~vlK~~~~~----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~-------~~~~~~~v~e~   96 (264)
T 1nd4_A           29 IGCSDAAVFRLSA-QGRPVLFVKTDLSG----ALNELQDEAARLSWLATTGVPCAAVLDVVT-------EAGRDWLLLGE   96 (264)
T ss_dssp             CTTSSCEEEEEEC-TTSCCEEEEEECSC----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEE-------CSSCEEEEEEC
T ss_pred             cCCCCceEEEEec-CCCCeEEEEeCCcc----cchhhhHHHHHHHHHHhCCCCCCeEEEecc-------CCCCCEEEEEe
Confidence            4666799999975 45677999997532    2345788999999996544  445776443       23457899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCC------------------------------------
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSE------------------------------------  125 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~------------------------------------  125 (340)
                      ++|.+|.  ...        .+   ...++.++++.|..||+..                                    
T Consensus        97 i~G~~l~--~~~--------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (264)
T 1nd4_A           97 VPGQDLL--SSH--------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ  163 (264)
T ss_dssp             CSSEETT--TSC--------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGT
T ss_pred             cCCcccC--cCc--------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhcc
Confidence            9998884  211        12   2356778888888888721                                    


Q ss_pred             --------------------CceecCCCCCCcEEecCCCceEEeccccceee
Q 019481          126 --------------------KQVIYRDFKAPNILLDETFKCNLSDFSTAKVS  157 (340)
Q Consensus       126 --------------------~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~  157 (340)
                                          ..++|+|++|.||+++.++.++|+|||.+...
T Consensus       164 ~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g  215 (264)
T 1nd4_A          164 GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA  215 (264)
T ss_dssp             TCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred             CccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence                                12999999999999987766779999998643

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.33  E-value=5.3e-12  Score=108.85  Aligned_cols=132  Identities=11%  Similarity=-0.004  Sum_probs=97.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      +|+.+.||++...  ++.+++|+...... .....+.+|+++++.+. +..+.++++++.       +.+..|++||+++
T Consensus        24 g~s~~~v~~~~~~--~~~~vlK~~~~~~~-~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~-------~~~~~~lv~e~i~   93 (263)
T 3tm0_A           24 GMSPAKVYKLVGE--NENLYLKMTDSRYK-GTTYDVEREKDMMLWLEGKLPVPKVLHFER-------HDGWSNLLMSEAD   93 (263)
T ss_dssp             CCSSSEEEEEECS--SCEEEEEEECGGGT-TSTTCHHHHHHHHHHHTTTSCCCCEEEEEE-------ETTEEEEEEECCS
T ss_pred             CCCCCeEEEEECC--CCcEEEEeCCcccC-CCHHHHHHHHHHHHHHhcCCCCCeEEEEEe-------cCCceEEEEEecC
Confidence            4556889999753  57899999864211 22345889999999995 667778887553       2346789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCC--------------------------------------
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSE--------------------------------------  125 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~--------------------------------------  125 (340)
                      |.+|.+.....          .....++.+++++|..||+..                                      
T Consensus        94 G~~l~~~~~~~----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (263)
T 3tm0_A           94 GVLCSEEYEDE----------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP  163 (263)
T ss_dssp             SEEHHHHCCTT----------TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred             CeehhhccCCc----------ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence            99998764211          223467889999999999810                                      


Q ss_pred             -------------------CceecCCCCCCcEEecCCCceEEecccccee
Q 019481          126 -------------------KQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus       126 -------------------~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                                         ..++|+|++|.|||++.++.+.|+||+.+..
T Consensus       164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence                               3489999999999998765567999998754

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.25  E-value=3.1e-11  Score=109.01  Aligned_cols=140  Identities=11%  Similarity=0.097  Sum_probs=98.9

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEee--ccCchhhHHHHHHHHHHhhhcCC--CccccccccccccccccCCcceeeeee
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHE--LITPLQLRRDDDGKLDSLEEIFH--PNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~--~~~~~~~~~~~~~E~~~l~~l~h--pnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      ++|.++.||++...  +..+++|+..  ..........+.+|..+++.+..  ..+.+++.+..+..    ..+..+++|
T Consensus        47 ~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~----~~g~~~~vm  120 (359)
T 3dxp_A           47 KGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDES----VIGRAFYIM  120 (359)
T ss_dssp             CC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTT----TTSSCEEEE
T ss_pred             CCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCC----ccCCeEEEE
Confidence            46788899999864  3568888875  32222234578899999999973  45677777543321    113467899


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcC-----------------------------------
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSS-----------------------------------  124 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~-----------------------------------  124 (340)
                      |+++|.++.+...  .     .+++.....++.+++..|..||+.                                   
T Consensus       121 e~v~G~~l~~~~~--~-----~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (359)
T 3dxp_A          121 EFVSGRVLWDQSL--P-----GMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETES  193 (359)
T ss_dssp             ECCCCBCCCCTTC--T-----TCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSC
T ss_pred             EecCCeecCCCcc--c-----cCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcC
Confidence            9999887754211  1     277888899999999999999972                                   


Q ss_pred             ---------------------CCceecCCCCCCcEEecCCCc--eEEecccccee
Q 019481          125 ---------------------EKQVIYRDFKAPNILLDETFK--CNLSDFSTAKV  156 (340)
Q Consensus       125 ---------------------~~~iiHrDlKp~NILl~~~~~--~kl~DFGla~~  156 (340)
                                           ...++|+|++|.|||++.++.  +.|+||+.+..
T Consensus       194 ~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          194 IPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             CHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             ChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                                 146999999999999997753  68999999864

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.70  E-value=5.3e-08  Score=85.55  Aligned_cols=135  Identities=16%  Similarity=0.169  Sum_probs=93.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CCcc--ccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HPNQ--VKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnI--v~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ++|....||++.     ..+++|+...   ......+.+|.++|+.+. +..+  .+.+......    ......|++|+
T Consensus        29 ~~G~~n~v~~v~-----~~~vlR~~~~---~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~----~~~~~~~~vm~   96 (304)
T 3sg8_A           29 GEGNDCIAYEIN-----RDFIFKFPKH---SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPS----ETYQMSFAGFT   96 (304)
T ss_dssp             EECSSEEEEEST-----TSEEEEEESS---HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCC----SSCSCSCEEEE
T ss_pred             CCCCcceEEEEC-----CEEEEEecCC---cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCC----CCCCcceEEEc
Confidence            357778899874     4588998742   234567899999999884 3322  2333311110    01123478899


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCC-----------------------------------
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSE-----------------------------------  125 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~-----------------------------------  125 (340)
                      +++|.+|.+....       .++.++...++.|++..|..||+..                                   
T Consensus        97 ~i~G~~l~~~~~~-------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (304)
T 3sg8_A           97 KIKGVPLTPLLLN-------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQ  169 (304)
T ss_dssp             CCCCEECCHHHHH-------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHH
T ss_pred             ccCCeECCccccc-------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCccc
Confidence            9999888654321       2677788888888888888888611                                   


Q ss_pred             ---------------------CceecCCCCCCcEEecC--CCceEEeccccceee
Q 019481          126 ---------------------KQVIYRDFKAPNILLDE--TFKCNLSDFSTAKVS  157 (340)
Q Consensus       126 ---------------------~~iiHrDlKp~NILl~~--~~~~kl~DFGla~~~  157 (340)
                                           ..++|+|++|.||+++.  .+.+.|+||+.+...
T Consensus       170 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~  224 (304)
T 3sg8_A          170 MKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS  224 (304)
T ss_dssp             HHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred             HHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence                                 24799999999999998  456789999998654

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.67  E-value=2e-07  Score=80.29  Aligned_cols=128  Identities=16%  Similarity=0.085  Sum_probs=89.1

Q ss_pred             eEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeeccccCCCH
Q 019481            9 SVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGL   87 (340)
Q Consensus         9 g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~gsL   87 (340)
                      +.||+.....++..+.+|+-..    .....+.+|..+|+.+. +--+.+++++..       +.+..+++||+++|.++
T Consensus        39 ~~v~rl~~~~~~~~~~lk~~~~----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~-------~~~~~~lvme~l~G~~~  107 (272)
T 4gkh_A           39 ATIYRLYGKPNAPELFLKHGKG----SVANDVTDEMVRLNWLTAFMPLPTIKHFIR-------TPDDAWLLTTAIPGKTA  107 (272)
T ss_dssp             CEEEEEECCTTCCCEEEEEEET----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEE-------ETTEEEEEEECCCSEEH
T ss_pred             CeEEEEEecCCCeEEEEEECCC----CCHhHHHHHHHHHHHhccCCCcCeEEEEEE-------ECCeEEEEEEeeCCccc
Confidence            4699998888888899999752    23456888999998885 222445555332       33467899999999887


Q ss_pred             HHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCC------------------------------------------
Q 019481           88 ENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSE------------------------------------------  125 (340)
Q Consensus        88 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~------------------------------------------  125 (340)
                      .+......         .....+..+++..|.-||+..                                          
T Consensus       108 ~~~~~~~~---------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (272)
T 4gkh_A          108 FQVLEEYP---------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ  178 (272)
T ss_dssp             HHHHHHCG---------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred             cccccCCH---------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence            76654321         123345556666666666510                                          


Q ss_pred             --------------CceecCCCCCCcEEecCCCceEEecccccee
Q 019481          126 --------------KQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus       126 --------------~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                                    ..++|+|+.+.|||++.++.+-|+||+.+..
T Consensus       179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence                          1378999999999999877677999998864

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.63  E-value=4e-07  Score=80.02  Aligned_cols=133  Identities=13%  Similarity=0.059  Sum_probs=87.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCC---ccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHP---NQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hp---nIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ++|....||+.     +..+++|+-.   .......+.+|.++|+.+.+.   .+.+.+.+..      ...+..+++||
T Consensus        28 ~~G~~n~v~~v-----g~~~VlR~~~---~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~------~~~g~~~~v~e   93 (306)
T 3tdw_A           28 GEGFRNYAILV-----NGDWVFRFPK---SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGK------RSDGNPFVGYR   93 (306)
T ss_dssp             EECSSEEEEEE-----TTTEEEEEES---SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEE------CTTSCEEEEEE
T ss_pred             CCCcceeEEEE-----CCEEEEEecC---CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecc------cCCCceEEEEe
Confidence            45667789988     4568888853   233456789999999999753   2334444221      12335679999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcC------------------------------------
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSS------------------------------------  124 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~------------------------------------  124 (340)
                      +++|.++.+..-.  .     ++......++.|+...|..||+.                                    
T Consensus        94 ~i~G~~l~~~~~~--~-----l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~  166 (306)
T 3tdw_A           94 KVQGQILGEDGMA--V-----LPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDE  166 (306)
T ss_dssp             CCCSEECHHHHHT--T-----SCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCH
T ss_pred             ccCCeECchhhhh--h-----CCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccch
Confidence            9999888763211  1     44445555555555555555541                                    


Q ss_pred             ----------------------CCceecCCCCCCcEEecC---CCce-EEeccccceee
Q 019481          125 ----------------------EKQVIYRDFKAPNILLDE---TFKC-NLSDFSTAKVS  157 (340)
Q Consensus       125 ----------------------~~~iiHrDlKp~NILl~~---~~~~-kl~DFGla~~~  157 (340)
                                            ...++|+|++|.||+++.   ++.+ .|+||+.+...
T Consensus       167 ~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g  225 (306)
T 3tdw_A          167 SLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS  225 (306)
T ss_dssp             HHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred             hhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence                                  134699999999999987   4564 89999988653

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.21  E-value=6e-06  Score=75.21  Aligned_cols=73  Identities=7%  Similarity=-0.078  Sum_probs=43.0

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCc---h---hhHHHHHHHHHHhhhcCC--Ccc-ccccccccccccccCCcce
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITP---L---QLRRDDDGKLDSLEEIFH--PNQ-VKPSGYWSMNICLTGDRRY   74 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~---~---~~~~~~~~E~~~l~~l~h--pnI-v~l~~~f~~~~~~~~~~~~   74 (340)
                      ++|.++.||++....+++.+++|.......   .   ...+.+.+|.++++.+..  |.. .+++.+         +...
T Consensus        39 g~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~---------d~~~  109 (397)
T 2olc_A           39 GDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS---------DTEM  109 (397)
T ss_dssp             CSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE---------ETTT
T ss_pred             CCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE---------cCCc
Confidence            357789999998766678899998653111   0   123456789999988742  333 344431         1123


Q ss_pred             eeeeeccccCC
Q 019481           75 CWKNKWLMQKK   85 (340)
Q Consensus        75 ~~~~~e~~~~g   85 (340)
                      .+++||++++.
T Consensus       110 ~~lvmE~l~g~  120 (397)
T 2olc_A          110 AVTVMEDLSHL  120 (397)
T ss_dssp             TEEEECCCTTS
T ss_pred             cEEEEEeCCCc
Confidence            46889998763

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.20  E-value=1.6e-06  Score=77.74  Aligned_cols=81  Identities=6%  Similarity=-0.168  Sum_probs=48.5

Q ss_pred             CCCcceEEEEEEcC---C---CCceEEEEEeeccCc--hhhHHHHHHHHHHhhhcC-C--CccccccccccccccccCCc
Q 019481            4 SAPSFSVLIHVPFP---D---DRDDVMLKLHELITP--LQLRRDDDGKLDSLEEIF-H--PNQVKPSGYWSMNICLTGDR   72 (340)
Q Consensus         4 ~~G~fg~V~~~~~~---~---~~~~vAiK~~~~~~~--~~~~~~~~~E~~~l~~l~-h--pnIv~l~~~f~~~~~~~~~~   72 (340)
                      ++|....+|+....   .   +++.+++|+......  ......+.+|..+++.+. +  -.+.+++.+......    .
T Consensus        30 ~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~----~  105 (357)
T 3ats_A           30 STGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV----L  105 (357)
T ss_dssp             TTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT----T
T ss_pred             CCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc----c
Confidence            57778899988653   1   156788998753210  001245788999888885 2  245566653322110    1


Q ss_pred             ceeeeeeccccCCCHH
Q 019481           73 RYCWKNKWLMQKKGLE   88 (340)
Q Consensus        73 ~~~~~~~e~~~~gsL~   88 (340)
                      +..+++||+++|.++.
T Consensus       106 g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A          106 GTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             SSCEEEEECCCCBCCC
T ss_pred             CCceEEEEecCCCChh
Confidence            2456889999886654

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.16  E-value=3.2e-05  Score=68.59  Aligned_cols=31  Identities=23%  Similarity=0.282  Sum_probs=28.1

Q ss_pred             CceecCCCCCCcEEecCCCceEEecccccee
Q 019481          126 KQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus       126 ~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      ..++|+|+++.|||++.++.+.|+||+.+..
T Consensus       222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             CCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             CceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence            6799999999999998888999999998753

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.61  E-value=0.00057  Score=60.00  Aligned_cols=146  Identities=12%  Similarity=-0.048  Sum_probs=73.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCc--cccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPN--QVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpn--Iv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      +|....+|+..... + .+++|+....   ...+.+..|..+++.+...+  +.+++..- +...+....+..+.+++++
T Consensus        32 ~G~~n~~~~v~~~~-g-~~vlk~~~~~---~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~-~g~~~~~~~g~~~~l~~~l  105 (322)
T 2ppq_A           32 EGVENSNFLLHTTK-D-PLILTLYEKR---VEKNDLPFFLGLMQHLAAKGLSCPLPLPRK-DGELLGELSGRPAALISFL  105 (322)
T ss_dssp             C---EEEEEEEESS-C-CEEEEEECC------CCHHHHHHHHHHHHHHTTCCCCCBCCBT-TCCSCEEETTEEEEEEECC
T ss_pred             CCcccceEEEEeCC-c-cEEEEEeCCC---CCHHHHHHHHHHHHHHHHCCCCCCcccCCC-CCCEEEEECCEEEEEEEeC
Confidence            45567899987543 3 5889998642   12234567888887774222  23333210 0000111123457888998


Q ss_pred             cCCCHHH--------------Hhccc----CCCccccC---CHHHHHH------------HHHHHHHHHHHhhc-----C
Q 019481           83 QKKGLEN--------------VHIGE----HPASVRQL---RRAERLE------------IVTKMCQDLAFLHS-----S  124 (340)
Q Consensus        83 ~~gsL~~--------------~l~~~----~~~~~~~l---~~~~~~~------------i~~qi~~~L~yLH~-----~  124 (340)
                      +|..+..              .++..    ........   .|.....            +...+...++.+.+     .
T Consensus       106 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~  185 (322)
T 2ppq_A          106 EGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDL  185 (322)
T ss_dssp             CCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSS
T ss_pred             CCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccC
Confidence            8754311              01111    10000000   1111000            00113334455542     1


Q ss_pred             CCceecCCCCCCcEEecCCCceEEecccccee
Q 019481          125 EKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus       125 ~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      ..+++|+|+.+.|||++.++.+.|+||+.+..
T Consensus       186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          186 PAGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             CEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             CcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence            25799999999999998776568999998754

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.60  E-value=0.00029  Score=61.42  Aligned_cols=30  Identities=17%  Similarity=0.088  Sum_probs=25.9

Q ss_pred             CceecCCCCCCcEEecCCCceEEecccccee
Q 019481          126 KQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus       126 ~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      ..++|+|+.|.||+ ..++.+.++||..+..
T Consensus       173 ~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          173 LAACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             CEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             ceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            45899999999999 5677899999998864

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=97.55  E-value=0.00087  Score=58.94  Aligned_cols=144  Identities=10%  Similarity=0.006  Sum_probs=76.6

Q ss_pred             CcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCC--ccccccccccccccccCCcceeeeeecccc
Q 019481            6 PSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHP--NQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         6 G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hp--nIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      |....||++... +|+.+++|+.+...  .....+..|..+++.+...  .+.+++..  +...+....+..+.++++++
T Consensus        36 g~~n~~y~v~~~-~g~~~vlK~~~~~~--~~~~~~~~E~~~~~~L~~~g~~vp~~~~~--~g~~~~~~~g~~~~l~~~i~  110 (328)
T 1zyl_A           36 SYENRVYQFQDE-DRRRFVVKFYRPER--WTADQILEEHQFALQLVNDEVPVAAPVAF--NGQTLLNHQGFYFAVFPSVG  110 (328)
T ss_dssp             CSSSEEEEECCT-TCCCEEEEEECTTT--SCHHHHHHHHHHHHHHHHTTCSBCCCCCB--TTBSCEEETTEEEEEEECCC
T ss_pred             CcccceEEEEcC-CCCEEEEEEcCCCC--CCHHHHHHHHHHHHHHHHcCCeecceeec--CCcEEEEECCEEEEEEEecC
Confidence            566789988653 45579999986321  1234567788888887522  23444442  11111112335567889887


Q ss_pred             CCCHH-----H------H---hc----ccCCCccccCCHHH----------------------HHHHHHHHHHHHHHhhc
Q 019481           84 KKGLE-----N------V---HI----GEHPASVRQLRRAE----------------------RLEIVTKMCQDLAFLHS  123 (340)
Q Consensus        84 ~gsL~-----~------~---l~----~~~~~~~~~l~~~~----------------------~~~i~~qi~~~L~yLH~  123 (340)
                      |.++.     .      .   ++    .........++...                      ....+.+++..++-+-.
T Consensus       111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  190 (328)
T 1zyl_A          111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR  190 (328)
T ss_dssp             CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence            64321     0      0   11    10000001122111                      01122222222322211


Q ss_pred             --CCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481          124 --SEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus       124 --~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                        ....++|+|+++.|||++ + .+.|+||+.+..
T Consensus       191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence              125689999999999998 4 899999998754

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.49  E-value=0.00036  Score=63.88  Aligned_cols=31  Identities=10%  Similarity=0.151  Sum_probs=27.7

Q ss_pred             CceecCCCCCCcEEecCCCceEEeccccceee
Q 019481          126 KQVIYRDFKAPNILLDETFKCNLSDFSTAKVS  157 (340)
Q Consensus       126 ~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~  157 (340)
                      ..++|+|++|.|||++.++ ++++||+.+...
T Consensus       232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G  262 (420)
T 2pyw_A          232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYG  262 (420)
T ss_dssp             CEEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred             CeEEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence            7799999999999998876 999999998653

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.44  E-value=0.00084  Score=58.79  Aligned_cols=71  Identities=13%  Similarity=0.018  Sum_probs=49.9

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC---CCccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF---HPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ++|....+|+...  ++..+++|+...    .....+.+|.+.|+.|.   ...+.+.+.+..       +.+..+++||
T Consensus        45 ~gG~~n~~y~v~~--~~~~~vlK~~~~----~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~-------~~g~~~lvme  111 (312)
T 3jr1_A           45 YSGEMNEIWLIND--EVQTVFVKINER----SYRSMFRAEADQLALLAKTNSINVPLVYGIGN-------SQGHSFLLLE  111 (312)
T ss_dssp             CCSSSSEEEEEES--SSCEEEEEEEEG----GGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEE-------CSSEEEEEEE
T ss_pred             CCccceeeeEEEE--CCCeEEEEeCCc----ccHHHHHHHHHHHHHHHhhCCCCcceEEEEee-------cCCceEEEEE
Confidence            4678899999985  356788998753    23556888999988884   245666666322       2346789999


Q ss_pred             cccCCCH
Q 019481           81 LMQKKGL   87 (340)
Q Consensus        81 ~~~~gsL   87 (340)
                      +++|.++
T Consensus       112 ~l~G~~~  118 (312)
T 3jr1_A          112 ALNKSKN  118 (312)
T ss_dssp             CCCCCCC
T ss_pred             eccCCCC
Confidence            9998754

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=97.41  E-value=0.00054  Score=63.34  Aligned_cols=70  Identities=11%  Similarity=0.061  Sum_probs=42.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCcc-ccccccccccccccCCcceeeeeeccc
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQ-VKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnI-v~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      ++|-...+|++....++..+++|+......  ..-...+|..+++.+...++ .++++.|.       +  .  .++||+
T Consensus       117 sgG~tN~~y~v~~~~~~~~~vLRi~g~~~~--~~idR~~E~~vl~~L~~~gl~P~ll~~~~-------~--G--~v~e~I  183 (458)
T 2qg7_A          117 NGGITNILIKVKDMSKQAKYLIRLYGPKTD--EIINREREKKISCILYNKNIAKKIYVFFT-------N--G--RIEEFM  183 (458)
T ss_dssp             CC--CEEEEEEEETTTTEEEEEEEECC-CC--SCSCHHHHHHHHHHHTTSSSBCCEEEEET-------T--E--EEEECC
T ss_pred             CCCeEeEEEEEEECCCCceEEEEECCCChh--hhcCHHHHHHHHHHHHhcCCCCCEEEEeC-------C--e--EEEEee
Confidence            356668899998765457889998753211  11112689999999975555 46666442       1  1  477888


Q ss_pred             cCCC
Q 019481           83 QKKG   86 (340)
Q Consensus        83 ~~gs   86 (340)
                      +|.+
T Consensus       184 ~G~~  187 (458)
T 2qg7_A          184 DGYA  187 (458)
T ss_dssp             CSEE
T ss_pred             CCcc
Confidence            7633

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=97.37  E-value=0.00037  Score=64.03  Aligned_cols=67  Identities=9%  Similarity=0.010  Sum_probs=42.1

Q ss_pred             CCCcceEEEEEEcCC-------CCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCcc-ccccccccccccccCCccee
Q 019481            4 SAPSFSVLIHVPFPD-------DRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQ-VKPSGYWSMNICLTGDRRYC   75 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~-------~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnI-v~l~~~f~~~~~~~~~~~~~   75 (340)
                      ++|-...||++....       +++.+++|+.....   ....+.+|..+++.+...++ .++++.+.       +    
T Consensus        82 ~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~---~~~~li~E~~~l~~L~~~g~~P~l~~~~~-------~----  147 (429)
T 1nw1_A           82 KGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE---TESHLVAESVIFTLLSERHLGPKLYGIFS-------G----  147 (429)
T ss_dssp             CCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC---CHHHHHHHHHHHHHHHHTTSSSCEEEEET-------T----
T ss_pred             CCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC---cHHHHHHHHHHHHHHHhCCCCCcEEEEeC-------C----
Confidence            466678999998653       25679999984211   11345579999988864344 46666432       1    


Q ss_pred             eeeeccccC
Q 019481           76 WKNKWLMQK   84 (340)
Q Consensus        76 ~~~~e~~~~   84 (340)
                      ..++||++|
T Consensus       148 g~v~e~l~G  156 (429)
T 1nw1_A          148 GRLEEYIPS  156 (429)
T ss_dssp             EEEECCCCE
T ss_pred             CEEEEEeCC
Confidence            156777765

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=97.34  E-value=0.00079  Score=60.61  Aligned_cols=140  Identities=17%  Similarity=0.133  Sum_probs=78.9

Q ss_pred             CCCcceEEEEEEcCC-------CCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCc-cccccccccccccccCCccee
Q 019481            4 SAPSFSVLIHVPFPD-------DRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPN-QVKPSGYWSMNICLTGDRRYC   75 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~-------~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpn-Iv~l~~~f~~~~~~~~~~~~~   75 (340)
                      ++|-...+|++....       +++.+++|+....  ........+|.++++.+.--+ ..++++.+.       +    
T Consensus        59 sGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~--~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~-------~----  125 (379)
T 3feg_A           59 SGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI--LQGVDSLVLESVMFAILAERSLGPQLYGVFP-------E----  125 (379)
T ss_dssp             -----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET-------T----
T ss_pred             CCcccccEEEEEeCCCccccCCCCCeEEEEECCCc--cchHHHHHHHHHHHHHHHhcCCCCeEEEEcC-------C----
Confidence            356667899988643       3467999997431  123455668999998885222 245565432       1    


Q ss_pred             eeeeccccCCCHHH--------------H---hcccCCCccccC--CHHHHHHHHHHHHH-------------------H
Q 019481           76 WKNKWLMQKKGLEN--------------V---HIGEHPASVRQL--RRAERLEIVTKMCQ-------------------D  117 (340)
Q Consensus        76 ~~~~e~~~~gsL~~--------------~---l~~~~~~~~~~l--~~~~~~~i~~qi~~-------------------~  117 (340)
                      ..++||++|.+|..              .   ++..........  -+.++..|..++..                   .
T Consensus       126 g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~  205 (379)
T 3feg_A          126 GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDE  205 (379)
T ss_dssp             EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHH
T ss_pred             ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHH
Confidence            16788887644321              1   111111000111  24556666554422                   1


Q ss_pred             HHHh----hc--CCCceecCCCCCCcEEecCC----CceEEecccccee
Q 019481          118 LAFL----HS--SEKQVIYRDFKAPNILLDET----FKCNLSDFSTAKV  156 (340)
Q Consensus       118 L~yL----H~--~~~~iiHrDlKp~NILl~~~----~~~kl~DFGla~~  156 (340)
                      +..|    .+  ....++|+|+.+.||+++.+    +.+.++||..|..
T Consensus       206 ~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          206 MGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence            2222    22  22469999999999999876    7899999998854

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.15  E-value=0.0016  Score=57.48  Aligned_cols=32  Identities=31%  Similarity=0.450  Sum_probs=27.9

Q ss_pred             CceecCCCCCCcEEecCC----CceEEeccccceee
Q 019481          126 KQVIYRDFKAPNILLDET----FKCNLSDFSTAKVS  157 (340)
Q Consensus       126 ~~iiHrDlKp~NILl~~~----~~~kl~DFGla~~~  157 (340)
                      ..++|+|+.+.||+++.+    +.+.|+||+.+...
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            679999999999999874    67999999998653

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=97.13  E-value=0.0049  Score=54.58  Aligned_cols=32  Identities=16%  Similarity=0.216  Sum_probs=28.4

Q ss_pred             CceecCCCCCCcEEecCCCceEEeccccceee
Q 019481          126 KQVIYRDFKAPNILLDETFKCNLSDFSTAKVS  157 (340)
Q Consensus       126 ~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~  157 (340)
                      ..++|+|+.+.||+++.++.+.|+||+.+...
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~  237 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA  237 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence            56999999999999998888999999887653

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=97.08  E-value=0.00066  Score=60.94  Aligned_cols=30  Identities=20%  Similarity=0.221  Sum_probs=25.1

Q ss_pred             CceecCCCCCCcEEecCCCceEEecccccee
Q 019481          126 KQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus       126 ~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      ..++|+|+.+.|||++.++ +.++||..|..
T Consensus       212 ~~l~HgDl~~~Nil~~~~~-~~lID~e~a~~  241 (369)
T 3c5i_A          212 IVFCHNDLQENNIINTNKC-LRLIDFEYSGF  241 (369)
T ss_dssp             EEEECSCCCGGGEEECC-C-EEECCCTTCEE
T ss_pred             eEEEeCCCCcccEEecCCc-EEEEEecCCCC
Confidence            4699999999999998654 89999998753

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=96.89  E-value=0.0057  Score=52.70  Aligned_cols=70  Identities=11%  Similarity=-0.046  Sum_probs=43.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCC---ccccccccccccccccCCcceeeeeec
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHP---NQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hp---nIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      ++|..+.||+.+.. +|+.|.+|+..... ......+.+|...|+.|.-.   .+.+.+++         +  ..+++||
T Consensus        24 g~G~~~~vyrv~l~-DG~~~~vK~~~~~~-~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~---------~--~~~lv~e   90 (288)
T 3f7w_A           24 GHSHRWHLYRVELA-DGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGW---------D--DRTLAME   90 (288)
T ss_dssp             EEETTEEEEEEEET-TSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE---------E--TTEEEEE
T ss_pred             CCCCCeEEEEEEEC-CCCEEEEEEeCCCC-cchhhHHHHHHHHHHHHHhhCCCCcceEEec---------c--CceEEEE
Confidence            35677899999864 56789999865322 12234578899999888421   23344431         1  2247788


Q ss_pred             cccCCC
Q 019481           81 LMQKKG   86 (340)
Q Consensus        81 ~~~~gs   86 (340)
                      +++++.
T Consensus        91 ~l~~~~   96 (288)
T 3f7w_A           91 WVDERP   96 (288)
T ss_dssp             CCCCCC
T ss_pred             eecccC
Confidence            877653

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=95.57  E-value=0.034  Score=50.37  Aligned_cols=30  Identities=33%  Similarity=0.319  Sum_probs=25.1

Q ss_pred             ceecCCCCCCcEEe------cCCCceEEecccccee
Q 019481          127 QVIYRDFKAPNILL------DETFKCNLSDFSTAKV  156 (340)
Q Consensus       127 ~iiHrDlKp~NILl------~~~~~~kl~DFGla~~  156 (340)
                      .++|+|+.+.|||+      ++++.++++||-+|..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            35799999999999      4567799999998853

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=95.48  E-value=0.036  Score=50.56  Aligned_cols=30  Identities=13%  Similarity=0.250  Sum_probs=26.7

Q ss_pred             CceecCCCCCCcEEecCCCceEEecccccee
Q 019481          126 KQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus       126 ~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      ..++|+|+.+.||+ +.++.+.++||..|..
T Consensus       262 ~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~  291 (424)
T 3mes_A          262 LVFAHNDLQENNLL-QTQNNIRMIDYEYSAI  291 (424)
T ss_dssp             EEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             ceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence            46899999999999 7888999999998864

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=91.65  E-value=0.026  Score=52.17  Aligned_cols=57  Identities=11%  Similarity=-0.062  Sum_probs=14.3

Q ss_pred             CCcceEEEEEEcCCCCceEEE------EEeec-cCchhhHHHHHHHHHHhhhcCCCccccccccc
Q 019481            5 APSFSVLIHVPFPDDRDDVML------KLHEL-ITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYW   62 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAi------K~~~~-~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f   62 (340)
                      .| ||.||+|.......+||+      |..+. ....+....+.+|..+++..+|||+++.+++-
T Consensus       150 lG-fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~  213 (463)
T 3cxl_A          150 VG-YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK  213 (463)
T ss_dssp             SS-BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred             CC-chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence            45 999999998765567888      65543 22223345678899999999999999998843

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=89.08  E-value=0.52  Score=38.45  Aligned_cols=51  Identities=4%  Similarity=0.045  Sum_probs=43.5

Q ss_pred             CCHHHHHHHHHHHHHHHH-HhhcCCCceecCCCCCCcEEecCCCceEEecccccee
Q 019481          102 LRRAERLEIVTKMCQDLA-FLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus       102 l~~~~~~~i~~qi~~~L~-yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      ++....++++.+|+.-.. ++++    -+|--|.|+||++|.++.++|.-.|+-..
T Consensus        82 ~~~~eKlrll~nl~~L~~~~~~~----r~tf~l~P~NL~f~~~~~p~i~hRGi~~~  133 (219)
T 4ano_A           82 TTLLSRIRAAIHLVSKVKHHSAR----RLIFIVCPENLMFNRALEPFFLHVGVKES  133 (219)
T ss_dssp             SCHHHHHHHHHHHHHHHSSCCSS----SEECCCCGGGEEECTTCCEEESCCEETTT
T ss_pred             cCHHHHHHHHHHHHHHHHHhhhC----ceeEEEeCceEEEeCCCcEEEEEcCCccc
Confidence            788899999999988777 6666    78888999999999999999998887433

>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}

Probab=85.16  E-value=1.1  Score=36.50  Aligned_cols=52  Identities=6%  Similarity=-0.052  Sum_probs=44.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceee
Q 019481          102 LRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVS  157 (340)
Q Consensus       102 l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~  157 (340)
                      ++....++++.+|+.-.+++++    -+|--|.|+||++|.++.+++.=-|+-..+
T Consensus        78 ~~~~eKlr~l~ni~~l~~~~~~----r~tf~L~P~NL~f~~~~~p~i~~RGik~~l  129 (215)
T 4ann_A           78 FTKNEKLRYLLNIKNLEEVNRT----RYTFVLAPDELFFTRDGLPIAKTRGLQNVV  129 (215)
T ss_dssp             SCHHHHHHHHHHGGGGGGGGGS----SEECCCSGGGEEECTTSCEEESCCEETTTB
T ss_pred             cCHHHHHHHHHHHHHHHHHhcC----ceEEEEecceEEEcCCCCEEEEEccCccCC
Confidence            7788999999999988866665    688899999999999999999988875433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	340
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-08
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-07
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-07
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-07
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-07
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	4e-07
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	5e-07
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	5e-07
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	6e-07
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	8e-07
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	8e-07
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-06
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-06
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-06
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-06
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-06
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-06
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-06
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-06
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-06
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-05
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-05
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-05
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-05
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-05
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	3e-05
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	3e-05
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	4e-05
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	5e-05
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	5e-05
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	7e-05
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	9e-05
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-04
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-04
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-04
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-04
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-04
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	3e-04
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	4e-04
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-04
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	4e-04
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	5e-04
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	8e-04
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	8e-04
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	8e-04
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	9e-04
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	0.001
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	0.001
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	0.001
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	0.003
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	0.004
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	0.004
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	0.004

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (123), Expect = 4e-08
 Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 13/116 (11%)

Query: 52  HPNQVKPSGYWS--------MNICLTGDRRYCWKNK---WLMQKKGLENVHIGEHPASVR 100
           H N V   G  +           C  GD     ++K   +   +   EN    E    + 
Sbjct: 100 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 159

Query: 101 QLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV 156
            L   + L    ++ + + FL    K  ++RD  A N+L+       + DF  A+ 
Sbjct: 160 VLTFEDLLCFAYQVAKGMEFLEF--KSCVHRDLAARNVLVTHGKVVKICDFGLARD 213

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 1e-07
 Identities = 24/113 (21%), Positives = 40/113 (35%), Gaps = 13/113 (11%)

Query: 44  LDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLR 103
           +D L    HPN VK             +  +            ++ V +       R L 
Sbjct: 60  IDILASCDHPNIVKLLDA-----FYYENNLWILIE--FCAGGAVDAVMLELE----RPLT 108

Query: 104 RAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV 156
            ++   +  +    L +LH    ++I+RD KA NIL        L+DF  +  
Sbjct: 109 ESQIQVVCKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIKLADFGVSAK 159

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.3 bits (117), Expect = 2e-07
 Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 14/109 (12%)

Query: 47  LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
           L  + HP  ++  G +        D +  +     ++   L ++            +   
Sbjct: 58  LSIVTHPFIIRMWGTFQ-------DAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-- 108

Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
                 ++C  L +LH   K +IYRD K  NILLD+     ++DF  AK
Sbjct: 109 ---YAAEVCLALEYLH--SKDIIYRDLKPENILLDKNGHIKITDFGFAK 152

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.8 bits (116), Expect = 2e-07
 Identities = 15/79 (18%), Positives = 33/79 (41%), Gaps = 2/79 (2%)

Query: 77  KNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAP 136
             +  +  +      +      + +         +T++   L++ HS  K+VI+RD K  
Sbjct: 78  ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS--KRVIHRDIKPE 135

Query: 137 NILLDETFKCNLSDFSTAK 155
           N+LL    +  ++DF  + 
Sbjct: 136 NLLLGSAGELKIADFGWSV 154

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.8 bits (116), Expect = 3e-07
 Identities = 25/127 (19%), Positives = 46/127 (36%), Gaps = 9/127 (7%)

Query: 47  LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
           L E+ HPN V+       +  +       +      +   L +  I +     + L    
Sbjct: 57  LRELKHPNIVRY-----YDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEF 110

Query: 107 RLEIVTKMCQDLAFLHS---SEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD 163
            L ++T++   L   H        V++RD K  N+ LD      L DF  A++   + + 
Sbjct: 111 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF 170

Query: 164 LTALDTS 170
             A   +
Sbjct: 171 AKAFVGT 177

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.6 bits (115), Expect = 4e-07
 Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 12/113 (10%)

Query: 44  LDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLR 103
              ++EI HPN V+  G      C      Y           G    ++ E     +++ 
Sbjct: 64  AAVMKEIKHPNLVQLLGV-----CTREPPFYII---TEFMTYGNLLDYLRECNR--QEVS 113

Query: 104 RAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV 156
               L + T++   + +L    K  I+RD  A N L+ E     ++DF  +++
Sbjct: 114 AVVLLYMATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRL 164

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 48.5 bits (115), Expect = 5e-07
 Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 14/110 (12%)

Query: 47  LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
           L+++ HPN ++  G       L     +             + + + + P     L+  E
Sbjct: 69  LQKLRHPNTIQYRGC-----YLREHTAWLVME--YCLGSASDLLEVHKKP-----LQEVE 116

Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV 156
              +     Q LA+LHS    +I+RD KA NILL E     L DF +A +
Sbjct: 117 IAAVTHGALQGLAYLHS--HNMIHRDVKAGNILLSEPGLVKLGDFGSASI 164

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (114), Expect = 5e-07
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 100 RQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV 156
            +    + ++I  +  Q + +LH   K +I+RD K+ NI L E     + DF  A V
Sbjct: 99  TKFEMIKLIDIARQTAQGMDYLH--AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATV 153

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (113), Expect = 6e-07
 Identities = 20/112 (17%), Positives = 43/112 (38%), Gaps = 9/112 (8%)

Query: 47  LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
           L+ + HPN V+    W   +          K   ++  + + +  +  +    + ++   
Sbjct: 62  LKGLQHPNIVRFYDSWESTVK--------GKKCIVLVTELMTSGTLKTYLKRFKVMKIKV 113

Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILL-DETFKCNLSDFSTAKVS 157
                 ++ + L FLH+    +I+RD K  NI +   T    + D   A + 
Sbjct: 114 LRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 165

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 8e-07
 Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 6/108 (5%)

Query: 52  HPNQVKPSGYWSMNICLTGDRRYCWK---NKWLMQKKGLE-NVHIGEHPASVRQLRRAER 107
           HPN +   G       L     Y        +L + + LE +       ++   L   + 
Sbjct: 70  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 129

Query: 108 LEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           L     + + + +L    KQ I+RD  A NIL+ E +   ++DF  ++
Sbjct: 130 LHFAADVARGMDYLSQ--KQFIHRDLAARNILVGENYVAKIADFGLSR 175

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.9 bits (113), Expect = 8e-07
 Identities = 23/110 (20%), Positives = 38/110 (34%), Gaps = 14/110 (12%)

Query: 47  LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
           L+ +  P  VK    +  N  L     Y    +               H   + +     
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS------------HLRRIGRFSEPH 142

Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV 156
                 ++     +LHS    +IYRD K  N+L+D+     ++DF  AK 
Sbjct: 143 ARFYAAQIVLTFEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (112), Expect = 1e-06
 Identities = 20/113 (17%), Positives = 44/113 (38%), Gaps = 13/113 (11%)

Query: 44  LDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLR 103
              ++++ H   V+     S          Y  K   L   KG    ++           
Sbjct: 63  AQVMKKLRHEKLVQLYAVVSEEPIYIVTE-YMSKGSLLDFLKGETGKYLRL--------- 112

Query: 104 RAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV 156
             + +++  ++   +A++       ++RD +A NIL+ E   C ++DF  A++
Sbjct: 113 -PQLVDMAAQIASGMAYVE--RMNYVHRDLRAANILVGENLVCKVADFGLARL 162

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 1e-06
 Identities = 28/113 (24%), Positives = 39/113 (34%), Gaps = 12/113 (10%)

Query: 52  HPNQVKPSGYWS--------MNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLR 103
           H N V   G  +           C  GD     + K         +  I E       L 
Sbjct: 86  HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE--LALD 143

Query: 104 RAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV 156
             + L    ++ + +AFL S  K  I+RD  A NILL       + DF  A+ 
Sbjct: 144 LEDLLSFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRITKICDFGLARD 194

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.0 bits (111), Expect = 1e-06
 Identities = 17/109 (15%), Positives = 39/109 (35%), Gaps = 13/109 (11%)

Query: 47  LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
           L E   P  V   G        +            M+   ++   + +      ++    
Sbjct: 58  LHECNSPYIVGFYGA-----FYSDGEIS-----ICMEH--MDGGSLDQVLKKAGRIPEQI 105

Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
             ++   + + L +L   + ++++RD K  NIL++   +  L DF  + 
Sbjct: 106 LGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG 153

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (110), Expect = 2e-06
 Identities = 22/124 (17%), Positives = 50/124 (40%), Gaps = 16/124 (12%)

Query: 47  LEEIFHPNQVKPSGYW-SMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRA 105
           + ++ +P  V+  G   +  + L  +         +     L    +G+      ++  +
Sbjct: 63  MHQLDNPYIVRLIGVCQAEALMLVME---------MAGGGPLHKFLVGKR----EEIPVS 109

Query: 106 ERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLT 165
              E++ ++   + +L   EK  ++RD  A N+LL       +SDF  +K    +++  T
Sbjct: 110 NVAELLHQVSMGMKYLE--EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 167

Query: 166 ALDT 169
           A   
Sbjct: 168 ARSA 171

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (109), Expect = 2e-06
 Identities = 20/110 (18%), Positives = 48/110 (43%), Gaps = 15/110 (13%)

Query: 47  LEEIFHPNQVKPSGYWSMN-ICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRA 105
           ++++ H   V+     +   I +  +  Y      +   K    + +  +          
Sbjct: 62  MKQLQHQRLVRLYAVVTQEPIYIITE--YMENGSLVDFLKTPSGIKLTIN---------- 109

Query: 106 ERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           + L++  ++ + +AF+    +  I+RD +A NIL+ +T  C ++DF  A+
Sbjct: 110 KLLDMAAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLAR 157

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 46.4 bits (109), Expect = 2e-06
 Identities = 26/150 (17%), Positives = 54/150 (36%), Gaps = 14/150 (9%)

Query: 18  DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWS--------MNICLT 69
           +    V +K+ +      ++ D   +   + E  +PN VK  G  +              
Sbjct: 41  EPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAY 100

Query: 70  GDRRYCWKNKWLMQKKGLENVHIGE----HPASVRQLRRAERLEIVTKMCQDLAFLHSSE 125
           GD     ++        L +  +             L  AE+L I  ++   +A+L    
Sbjct: 101 GDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE-- 158

Query: 126 KQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           ++ ++RD    N L+ E     ++DF  ++
Sbjct: 159 RKFVHRDLATRNCLVGENMVVKIADFGLSR 188

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 2e-06
 Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 7/109 (6%)

Query: 52  HPNQVKPSGYW---SMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQ--LRRAE 106
           H N V   G        + +  +          ++ K  E V     P  + +  L    
Sbjct: 76  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 135

Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
            +    ++ + + FL S  ++ I+RD  A NILL E     + DF  A+
Sbjct: 136 LICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLAR 182

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (109), Expect = 2e-06
 Identities = 26/136 (19%), Positives = 47/136 (34%), Gaps = 20/136 (14%)

Query: 34  LQLRRDDDGKLDSLEEIF------HPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGL 87
           + ++R  D   +  +EI       H N VK  G+                N   +  +  
Sbjct: 38  VDMKRAVDCPENIKKEICINKMLNHENVVKFYGH------------RREGNIQYLFLEYC 85

Query: 88  ENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCN 147
               + +       +   +      ++   + +LH     + +RD K  N+LLDE     
Sbjct: 86  SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--IGITHRDIKPENLLLDERDNLK 143

Query: 148 LSDFSTAKVSAVENAD 163
           +SDF  A V    N +
Sbjct: 144 ISDFGLATVFRYNNRE 159

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (108), Expect = 3e-06
 Identities = 21/109 (19%), Positives = 46/109 (42%), Gaps = 15/109 (13%)

Query: 47  LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
           ++++ +P  V+  G              C    W++  +  E   + ++    R ++   
Sbjct: 62  MQQLDNPYIVRMIGI-------------CEAESWMLVMEMAELGPLNKYLQQNRHVKDKN 108

Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
            +E+V ++   + +L   E   ++RD  A N+LL       +SDF  +K
Sbjct: 109 IIELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 155

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.4 bits (104), Expect = 1e-05
 Identities = 19/122 (15%), Positives = 43/122 (35%), Gaps = 13/122 (10%)

Query: 44  LDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLR 103
              + +  HPN +         +               M+   L++           Q  
Sbjct: 78  ASIMGQFDHPNVIHL-----EGVVTKSTPVMIITE--FMENGSLDSFLRQNDG----QFT 126

Query: 104 RAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD 163
             + + ++  +   + +L   +   ++RD  A NIL++    C +SDF  ++    + +D
Sbjct: 127 VIQLVGMLRGIAAGMKYLA--DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 184

Query: 164 LT 165
            T
Sbjct: 185 PT 186

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 1e-05
 Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 8/113 (7%)

Query: 44  LDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLR 103
           L  LE   HPN V+     +++      +      + + Q        + E       ++
Sbjct: 61  LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLV-FEHVDQDLTTYLDKVPEPGVPTETIK 119

Query: 104 RAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV 156
                 ++ ++ + L FLHS   +V++RD K  NIL+  + +  L+DF  A++
Sbjct: 120 D-----MMFQLLRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLARI 165

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (103), Expect = 1e-05
 Identities = 24/144 (16%), Positives = 55/144 (38%), Gaps = 14/144 (9%)

Query: 23  VMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM 82
           V +K     T  +  ++   +   +  + +P+  +      + ICLT   +       LM
Sbjct: 41  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRL-----LGICLTSTVQLIT---QLM 92

Query: 83  QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE 142
               L +            +     L    ++ + + +L   ++++++RD  A N+L+  
Sbjct: 93  PFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKT 146

Query: 143 TFKCNLSDFSTAKVSAVENADLTA 166
                ++DF  AK+   E  +  A
Sbjct: 147 PQHVKITDFGLAKLLGAEEKEYHA 170

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 1e-05
 Identities = 22/123 (17%), Positives = 44/123 (35%), Gaps = 11/123 (8%)

Query: 47  LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
           L    H N +  +              Y      +    G +   + +     + L    
Sbjct: 60  LLRFRHENIIGINDIIRAPTIEQMKDVYL-----VTHLMGADLYKLLKT----QHLSNDH 110

Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTA 166
               + ++ + L ++HS    V++RD K  N+LL+ T    + DF  A+V+  ++     
Sbjct: 111 ICYFLYQILRGLKYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 168

Query: 167 LDT 169
           L  
Sbjct: 169 LTE 171

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 2e-05
 Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 14/115 (12%)

Query: 47  LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
           +  + HP  VK             ++ Y       +     +N  + ++   +       
Sbjct: 62  MSRLDHPFFVKLYFT-----FQDDEKLYF-----GLSY--AKNGELLKYIRKIGSFDETC 109

Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN 161
                 ++   L +LH   K +I+RD K  NILL+E     ++DF TAKV + E+
Sbjct: 110 TRFYTAEIVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 162

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 3e-05
 Identities = 19/109 (17%), Positives = 38/109 (34%), Gaps = 21/109 (19%)

Query: 52  HPNQVKPSGYWSMNICLTGDRRYCWKNKWLM---QKKGLENVHIGEHPASVRQLRRAERL 108
           H N +      +            W   WL+    + G    ++  +  +V        +
Sbjct: 56  HENILGFIAADN-------KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG-----MI 103

Query: 109 EIVTKMCQDLAFLHS------SEKQVIYRDFKAPNILLDETFKCNLSDF 151
           ++       LA LH        +  + +RD K+ NIL+ +   C ++D 
Sbjct: 104 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 3e-05
 Identities = 23/127 (18%), Positives = 46/127 (36%), Gaps = 19/127 (14%)

Query: 35  QLRRDDDGKLDSLEEIF------HPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLE 88
            ++     + + +EE        H   V+  G      C      +       M    L 
Sbjct: 35  MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV-----CTKQRPIFIIT--EYMANGCLL 87

Query: 89  NVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNL 148
           N           + +  + LE+   +C+ + +L    KQ ++RD  A N L+++     +
Sbjct: 88  NYLREMRH----RFQTQQLLEMCKDVCEAMEYLE--SKQFLHRDLAARNCLVNDQGVVKV 141

Query: 149 SDFSTAK 155
           SDF  ++
Sbjct: 142 SDFGLSR 148

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 42.4 bits (99), Expect = 4e-05
 Identities = 26/144 (18%), Positives = 46/144 (31%), Gaps = 25/144 (17%)

Query: 12  IHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGD 71
           +       +    L L+E I    +   D   +  +   FH         + +++   GD
Sbjct: 37  LDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD---KLSFILDLMNGGD 93

Query: 72  RRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYR 131
             Y      +  +                     +      ++   L  +H+  + V+YR
Sbjct: 94  LHYHLSQHGVFSEA--------------------DMRFYAAEIILGLEHMHN--RFVVYR 131

Query: 132 DFKAPNILLDETFKCNLSDFSTAK 155
           D K  NILLDE     +SD   A 
Sbjct: 132 DLKPANILLDEHGHVRISDLGLAC 155

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 42.0 bits (98), Expect = 5e-05
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 100 RQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
             L   E  +I+  + + +  LH     +++RD K  NILLD+     L+DF  + 
Sbjct: 105 VTLSEKETRKIMRALLEVICALHK--LNIVHRDLKPENILLDDDMNIKLTDFGFSC 158

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (98), Expect = 5e-05
 Identities = 25/119 (21%), Positives = 44/119 (36%), Gaps = 13/119 (10%)

Query: 47  LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
           L+E+ HPN VK                  +     + +   + +           +    
Sbjct: 55  LKELNHPNIVKLLDVIH-------TENKLYLVFEFLHQDLKKFMDASAL----TGIPLPL 103

Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLT 165
               + ++ Q LAF HS   +V++RD K  N+L++      L+DF  A+   V     T
Sbjct: 104 IKSYLFQLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 160

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (97), Expect = 7e-05
 Identities = 16/112 (14%), Positives = 42/112 (37%), Gaps = 17/112 (15%)

Query: 47  LEEIFHPNQVKPSGYW--SMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRR 104
           + +  H N ++  G       + +  +          +++K               +   
Sbjct: 63  MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKD-------------GEFSV 109

Query: 105 AERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV 156
            + + ++  +   + +L +     ++RD  A NIL++    C +SDF  ++V
Sbjct: 110 LQLVGMLRGIAAGMKYLAN--MNYVHRDLAARNILVNSNLVCKVSDFGLSRV 159

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 9e-05
 Identities = 27/111 (24%), Positives = 40/111 (36%), Gaps = 18/111 (16%)

Query: 47  LEEIFHPNQVKPSGYWSM--NICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRR 104
           L+E+ HPN +     +    NI L  D         +                    L  
Sbjct: 54  LQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNS--------------LVLTP 99

Query: 105 AERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           +     +    Q L +LH     +++RD K  N+LLDE     L+DF  AK
Sbjct: 100 SHIKAYMLMTLQGLEYLHQ--HWILHRDLKPNNLLLDENGVLKLADFGLAK 148

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 2e-04
 Identities = 27/140 (19%), Positives = 51/140 (36%), Gaps = 28/140 (20%)

Query: 23  VMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWS-------MNICLTGDRRYC 75
           V +K  +  T   +R     +  ++ +  HP+ VK  G  +       M +C  G+ R  
Sbjct: 38  VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSF 97

Query: 76  WKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKA 135
            + +                      L  A  +    ++   LA+L    K+ ++RD  A
Sbjct: 98  LQVRK-------------------YSLDLASLILYAYQLSTALAYLE--SKRFVHRDIAA 136

Query: 136 PNILLDETFKCNLSDFSTAK 155
            N+L+       L DF  ++
Sbjct: 137 RNVLVSSNDCVKLGDFGLSR 156

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 2e-04
 Identities = 30/119 (25%), Positives = 42/119 (35%), Gaps = 15/119 (12%)

Query: 47  LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
           + E  +PN V           L GD  +           G     + E      Q+    
Sbjct: 71  MRENKNPNIVNYLDS-----YLVGDELWVVMEYL---AGGSLTDVVTETCMDEGQIAA-- 120

Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLT 165
              +  +  Q L FLHS   QVI+RD K+ NILL       L+DF        E +  +
Sbjct: 121 ---VCRECLQALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 2e-04
 Identities = 23/114 (20%), Positives = 38/114 (33%), Gaps = 14/114 (12%)

Query: 52  HPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIV 111
           HP               T +  +       +    L       H   + +          
Sbjct: 62  HPFLTHMFCT-----FQTKENLFFVME--YLNGGDLMYHIQSCHKFDLSRATF-----YA 109

Query: 112 TKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLT 165
            ++   L FLH   K ++YRD K  NILLD+     ++DF   K + + +A   
Sbjct: 110 AEIILGLQFLH--SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN 161

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 2e-04
 Identities = 28/123 (22%), Positives = 44/123 (35%), Gaps = 19/123 (15%)

Query: 35  QLRRDDDGKLDSLEEIF------HPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLE 88
            +R     + D +EE        HP  V+  G      CL             M+   L 
Sbjct: 36  TIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV-----CLEQAPICLVF--EFMEHGCLS 88

Query: 89  NVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNL 148
           +    +      +      L +   +C+ +A+L   E  VI+RD  A N L+ E     +
Sbjct: 89  DYLRTQRGLFAAE----TLLGMCLDVCEGMAYLE--EACVIHRDLAARNCLVGENQVIKV 142

Query: 149 SDF 151
           SDF
Sbjct: 143 SDF 145

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (93), Expect = 2e-04
 Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 11/109 (10%)

Query: 47  LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
           + ++ H N V+  G       +          +  M K  L +            L    
Sbjct: 54  MTQLRHSNLVQLLGV-----IVEEKGGLYIVTE-YMAKGSLVDYLRSRGR---SVLGGDC 104

Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
            L+    +C+ + +L       ++RD  A N+L+ E     +SDF   K
Sbjct: 105 LLKFSLDVCEAMEYLEG--NNFVHRDLAARNVLVSEDNVAKVSDFGLTK 151

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 3e-04
 Identities = 26/127 (20%), Positives = 50/127 (39%), Gaps = 8/127 (6%)

Query: 47  LEEIFHPNQVKPSGYWSMNICLTGDRRYCW-KNKWLMQKKGLENVHIGEHPASVRQLRRA 105
           L+ + H N V       + IC T    Y   K    +     E+   G     + +   +
Sbjct: 63  LQLLKHENVVN-----LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS 117

Query: 106 ERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLT 165
           E   ++  +   L ++H    ++++RD KA N+L+       L+DF  A+  ++      
Sbjct: 118 EIKRVMQMLLNGLYYIHR--NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 175

Query: 166 ALDTSSV 172
              T+ V
Sbjct: 176 NRYTNRV 182

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 39.1 bits (90), Expect = 4e-04
 Identities = 22/112 (19%), Positives = 43/112 (38%), Gaps = 18/112 (16%)

Query: 47  LEEIFHPNQVKPSGYW--SMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRR 104
           L+E+ H N VK          + L  +       K L   +G               L  
Sbjct: 54  LKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEG--------------GLES 99

Query: 105 AERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV 156
                 + ++   +A+ H   ++V++RD K  N+L++   +  ++DF  A+ 
Sbjct: 100 VTAKSFLLQLLNGIAYCHD--RRVLHRDLKPQNLLINREGELKIADFGLARA 149

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 4e-04
 Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 12/126 (9%)

Query: 47  LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
           +++  HPN +   G      CL  +          M+   L N    E           +
Sbjct: 82  MKDFSHPNVLSLLGI-----CLRSEGSPLVVL-PYMKHGDLRNFIRNET----HNPTVKD 131

Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTA 166
            +    ++ + + FL    K+ ++RD  A N +LDE F   ++DF  A+    +  D   
Sbjct: 132 LIGFGLQVAKGMKFLA--SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 189

Query: 167 LDTSSV 172
             T + 
Sbjct: 190 NKTGAK 195

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 4e-04
 Identities = 22/109 (20%), Positives = 35/109 (32%), Gaps = 14/109 (12%)

Query: 47  LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
           L+   HP               T DR                   +  H +  R      
Sbjct: 59  LQNTRHPFLTAL-----KYAFQTHDRLCFVMEYA-------NGGELFFHLSRERVFTEER 106

Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
                 ++   L +LH   + V+YRD K  N++LD+     ++DF   K
Sbjct: 107 ARFYGAEIVSALEYLH--SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (89), Expect = 5e-04
 Identities = 21/121 (17%), Positives = 43/121 (35%), Gaps = 18/121 (14%)

Query: 47  LEEIFHPNQVKPSGYW--SMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRR 104
           L+E+ H N V+          + L  +       K+     G               L  
Sbjct: 55  LKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNG--------------DLDP 100

Query: 105 AERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADL 164
                 + ++ + L F H   + V++RD K  N+L++   +  L++F  A+   +     
Sbjct: 101 EIVKSFLFQLLKGLGFCH--SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158

Query: 165 T 165
           +
Sbjct: 159 S 159

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 8e-04
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 5/73 (6%)

Query: 100 RQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCN---LSDFSTAKV 156
           +     E  EI+  + + + +LHS    + +RD K  N+L           L+DF  AK 
Sbjct: 106 QAFTEREASEIMKSIGEAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 163

Query: 157 SAVENADLTALDT 169
           +   N+  T   T
Sbjct: 164 TTSHNSLTTPCYT 176

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 38.3 bits (88), Expect = 8e-04
 Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 7/62 (11%)

Query: 100 RQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCN-----LSDFSTA 154
           R+           +M   +  +H   K ++YRD K  N L+      N     + DF   
Sbjct: 96  RKFSVKTVAMAAKQMLARVQSIHE--KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 153

Query: 155 KV 156
           K 
Sbjct: 154 KF 155

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 38.5 bits (89), Expect = 8e-04
 Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 4/58 (6%)

Query: 100 RQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILL--DETFKCNLSDFSTAK 155
            ++   E +E + ++C+ L  +H  E   ++ D K  NI+     + +  L DF    
Sbjct: 119 NKMSEDEAVEYMRQVCKGLCHMH--ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTA 174

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 9e-04
 Identities = 20/108 (18%), Positives = 40/108 (37%), Gaps = 6/108 (5%)

Query: 52  HPNQVKPSGYWSMNICLTGDRRYC----WKNKWLMQKKGLENVHIGEHPASVRQLRRAER 107
           H N +   G  + +  L     Y      +     ++                QL   + 
Sbjct: 78  HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 137

Query: 108 LEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK 155
           +    ++ + + +L S  K+ I+RD  A N+L+ E     ++DF  A+
Sbjct: 138 VSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLAR 183

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 38.1 bits (88), Expect = 0.001
 Identities = 12/58 (20%), Positives = 26/58 (44%), Gaps = 4/58 (6%)

Query: 100 RQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCN--LSDFSTAK 155
            ++  AE +  + + C+ L  +H     +++ D K  NI+ +     +  + DF  A 
Sbjct: 122 YKMSEAEVINYMRQACEGLKHMHE--HSIVHLDIKPENIMCETKKASSVKIIDFGLAT 177

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (88), Expect = 0.001
 Identities = 19/111 (17%), Positives = 36/111 (32%), Gaps = 15/111 (13%)

Query: 47  LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
           L    H N +     +     L     +      + +        I        +L   E
Sbjct: 55  LNIARHRNILHLHESFESMEELVMIFEFI-SGLDIFE-------RINTSA---FELNERE 103

Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCN--LSDFSTAK 155
            +  V ++C+ L FLHS    + + D +  NI+          + +F  A+
Sbjct: 104 IVSYVHQVCEALQFLHS--HNIGHFDIRPENIIYQTRRSSTIKIIEFGQAR 152

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 0.001
 Identities = 19/113 (16%), Positives = 39/113 (34%), Gaps = 14/113 (12%)

Query: 44  LDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLR 103
           ++++  + H N ++  G       LT   +   +   L     L +              
Sbjct: 62  VNAMHSLDHRNLIRLYGV-----VLTPPMKMVTE---LAPLGSLLDRLRKHQ----GHFL 109

Query: 104 RAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKV 156
                    ++ + + +L S  K+ I+RD  A N+LL       + DF   + 
Sbjct: 110 LGTLSRYAVQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRA 160

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 35.9 bits (82), Expect = 0.003
 Identities = 11/116 (9%), Positives = 33/116 (28%), Gaps = 26/116 (22%)

Query: 47  LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
           L+++      K   +    + +            +                         
Sbjct: 68  LQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPD--------------------- 106

Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA 162
             E++  + +++A  +   + +++ D    N+L+ E     + DF  +     E  
Sbjct: 107 --EVLDMILEEVAKFYH--RGIVHGDLSQYNVLVSE-EGIWIIDFPQSVEVGEEGW 157

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 35.9 bits (82), Expect = 0.004
 Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 10/123 (8%)

Query: 47  LEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAE 106
              + HP  V                       +++ +  ++ V + +   +   +    
Sbjct: 61  AAALNHPAIVAVYDTGE-------AETPAGPLPYIVMEY-VDGVTLRDIVHTEGPMTPKR 112

Query: 107 RLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADLTA 166
            +E++   CQ L F H     +I+RD K  NI++  T    + DF  A+  A     +T 
Sbjct: 113 AIEVIADACQALNFSHQ--NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 170

Query: 167 LDT 169
              
Sbjct: 171 TAA 173

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (82), Expect = 0.004
 Identities = 27/132 (20%), Positives = 47/132 (35%), Gaps = 15/132 (11%)

Query: 24  MLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ 83
           +LK   ++   +       +   LE I     +    Y       T  + +         
Sbjct: 59  VLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYA----FQTETKLHLI------- 107

Query: 84  KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHS-SEKQVIYRDFKAPNILLDE 142
              L+ ++ GE    + Q  R    E+   + + +  L    +  +IYRD K  NILLD 
Sbjct: 108 ---LDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDS 164

Query: 143 TFKCNLSDFSTA 154
                L+DF  +
Sbjct: 165 NGHVVLTDFGLS 176

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 36.0 bits (82), Expect = 0.004
 Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 3/71 (4%)

Query: 87  LENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLD-ETFK 145
            E+V+  +     + L   +    + ++ + L + HS    +++RD K  N+++D E  K
Sbjct: 111 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHRK 168

Query: 146 CNLSDFSTAKV 156
             L D+  A+ 
Sbjct: 169 LRLIDWGLAEF 179

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	340
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.9
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.46
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.06
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.9
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	97.44
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	97.06
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	96.53

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-51  Score=353.87  Aligned_cols=242  Identities=14%  Similarity=0.061  Sum_probs=181.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||+||+|+++.+++.||+|+++........+.+.+|+++|++++|||||+++++|.+       .+..|++||||+|
T Consensus        15 ~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~-------~~~~~ivmEy~~g   87 (271)
T d1nvra_          15 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-------GNIQYLFLEYCSG   87 (271)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEE-------TTEEEEEEECCTT
T ss_pred             cCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeecc-------CceeEEEEeccCC
Confidence            589999999999999999999999865444556779999999999999999999998764       3477899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC---
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN---  161 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~---  161 (340)
                      |+|.+++.....     +++..++.++.||++||+|||+  ++|+||||||+|||++.++++||+|||+|+....+.   
T Consensus        88 g~L~~~l~~~~~-----l~e~~~~~i~~qi~~al~ylH~--~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~  160 (271)
T d1nvra_          88 GELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER  160 (271)
T ss_dssp             EEGGGGSBTTTB-----CCHHHHHHHHHHHHHHHHHHHH--TTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred             CcHHHHHhcCCC-----CCHHHHHHHHHHHHHHHHHHHH--cCCccCcccHHHEEECCCCCEEEccchhheeeccCCccc
Confidence            999999987665     9999999999999999999999  889999999999999999999999999999875432   


Q ss_pred             CcceeeccceeeccCccccchhh--hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMK--MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~--~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      ...+.+||+.|+|||.+.+.++.  ..|+||.|...+.+.++.  .||.........            .  .   ....
T Consensus       161 ~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~--~pf~~~~~~~~~------------~--~---~~~~  221 (271)
T d1nvra_         161 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------Y--S---DWKE  221 (271)
T ss_dssp             CBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSS--CSCSSSSTTSHH------------H--H---HHHT
T ss_pred             cccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCC--CCCCCCChHHHH------------H--H---HHhc
Confidence            23456899999999876655542  357888777777776655  333222111000            0  0   0000


Q ss_pred             hhccccccCcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          240 STITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       240 ~~~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ........+.++   .++...||+.||++|||++++++|||+.
T Consensus       222 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~  264 (271)
T d1nvra_         222 KKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN  264 (271)
T ss_dssp             TCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTT
T ss_pred             CCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhC
Confidence            000000001111   1234478999999999999999999994

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-51  Score=351.61  Aligned_cols=233  Identities=17%  Similarity=0.134  Sum_probs=177.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||+||+|+++.+++.||+|++.+..  .....+.+.+|++++++++|||||+++++|.       +.+..|++||||
T Consensus        16 ~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-------~~~~~~ivmEy~   88 (263)
T d2j4za1          16 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH-------DATRVYLILEYA   88 (263)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE-------CSSEEEEEEECC
T ss_pred             cCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEE-------ECCEEEEEEeec
Confidence            5889999999999999999999997522  2234567899999999999999999999775       444788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      ++|+|.+++.....     +++..++.++.||++||+|||+  ++|+||||||+|||++.++++||+|||+|+..... .
T Consensus        89 ~~g~L~~~l~~~~~-----l~e~~~~~i~~qi~~al~~lH~--~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~-~  160 (263)
T d2j4za1          89 PLGTVYRELQKLSK-----FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-R  160 (263)
T ss_dssp             TTCBHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC-C
T ss_pred             CCCcHHHHHhhcCC-----CCHHHHHHHHHHHHHHHHHHHH--CCeeeeeeccccceecCCCCEeecccceeeecCCC-c
Confidence            99999999998766     9999999999999999999999  88999999999999999999999999999876543 3


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      ....+||+.|+|||.+.+..+. ..|+||.|...+.+.++                     ..||.......... ... 
T Consensus       161 ~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G---------------------~~Pf~~~~~~~~~~-~i~-  217 (263)
T d2j4za1         161 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---------------------KPPFEANTYQETYK-RIS-  217 (263)
T ss_dssp             CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHS---------------------SCTTCCSSHHHHHH-HHH-
T ss_pred             ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcC---------------------CCCCCCCCHHHHHH-HHH-
Confidence            4567899999999655443322 23555555555544443                     33332211110000 111 


Q ss_pred             ccccccCcCCccc-------cccccccCCCCchHHHHhhcCcce
Q 019481          242 ITFLSALKITGCK-------SEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       242 ~~~~~~~~~p~~~-------~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                         ...+.+|..+       ...||++||++|||++++++|||+
T Consensus       218 ---~~~~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~  258 (263)
T d2j4za1         218 ---RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI  258 (263)
T ss_dssp             ---TTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHH
T ss_pred             ---cCCCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHcCcCc
Confidence               1112233333       346799999999999999999999

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-49  Score=344.49  Aligned_cols=239  Identities=15%  Similarity=0.101  Sum_probs=177.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||+||+|++..+++.||+|.+... ......+.+.+|+++|++++|||||+++++|++.   ..+....+++|||++
T Consensus        19 ~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~---~~~~~~~~ivmE~~~   95 (270)
T d1t4ha_          19 RGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST---VKGKKCIVLVTELMT   95 (270)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEE---SSSCEEEEEEEECCC
T ss_pred             cCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeec---cccCCEEEEEEeCCC
Confidence            589999999999999999999999763 3445567799999999999999999999988642   234457789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCc--eecCCCCCCcEEec-CCCceEEeccccceeeccc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQ--VIYRDFKAPNILLD-ETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~--iiHrDlKp~NILl~-~~~~~kl~DFGla~~~~~~  160 (340)
                      +|+|.+++.+...     +++..++.++.||++||+|||+  ++  |+||||||+|||++ .++.+||+|||+|+.... 
T Consensus        96 ~g~L~~~l~~~~~-----~~~~~~~~~~~qi~~gl~yLH~--~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~-  167 (270)
T d1t4ha_          96 SGTLKTYLKRFKV-----MKIKVLRSWCRQILKGLQFLHT--RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA-  167 (270)
T ss_dssp             SCBHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHT--SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT-
T ss_pred             CCcHHHHHhcccc-----ccHHHHHHHHHHHHHHHHHHHH--CCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC-
Confidence            9999999988765     9999999999999999999999  76  99999999999997 489999999999976433 


Q ss_pred             CCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      ....+.+||+.|+|||.+.+.--...|+||.|...+.+.+                     |..||..........   .
T Consensus       168 ~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~---------------------g~~Pf~~~~~~~~~~---~  223 (270)
T d1t4ha_         168 SFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMAT---------------------SEYPYSECQNAAQIY---R  223 (270)
T ss_dssp             TSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHH---------------------SSCTTTTCSSHHHHH---H
T ss_pred             CccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHH---------------------CCCCCCCcccHHHHH---H
Confidence            3445678999999997544322222355555554444443                     333332211110000   0


Q ss_pred             hccccc-cCcCC-------ccccccccccCCCCchHHHHhhcCcce
Q 019481          241 TITFLS-ALKIT-------GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~-~~~~p-------~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .+.... ++.++       .++-..||+.||++|||++++++|||+
T Consensus       224 ~i~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~f  269 (270)
T d1t4ha_         224 RVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF  269 (270)
T ss_dssp             HHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             HHHcCCCCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCccc
Confidence            000011 11111       123447899999999999999999998

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=9.4e-51  Score=358.34  Aligned_cols=239  Identities=16%  Similarity=0.093  Sum_probs=160.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||+||+|+++.+++.||+|++++.......+.+.+|+++|++++|||||+++++|.       +.+++|++||||+|
T Consensus        19 ~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~-------~~~~~~lvmE~~~g   91 (307)
T d1a06a_          19 TGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYE-------SGGHLYLIMQLVSG   91 (307)
T ss_dssp             SGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEE-------CSSEEEEEECCCCS
T ss_pred             eccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEE-------ECCEEEEEEeccCC
Confidence            68999999999999999999999986444444567889999999999999999999775       44578899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEec---CCCceEEeccccceeecccC
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLD---ETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~---~~~~~kl~DFGla~~~~~~~  161 (340)
                      |||.+++...+.     +++..+..++.||+.||+|||+  ++|+||||||+|||++   .++.+||+|||+|+......
T Consensus        92 g~L~~~l~~~~~-----l~e~~~~~~~~qi~~al~ylH~--~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~  164 (307)
T d1a06a_          92 GELFDRIVEKGF-----YTERDASRLIFQVLDAVKYLHD--LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS  164 (307)
T ss_dssp             CBHHHHHHTCSC-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEESSSSTTCCEEECCC----------
T ss_pred             CcHHHhhhcccC-----CCHHHHHHHHHHHHHHHHhhhh--ceeeeEEecccceeecccCCCceEEEeccceeEEccCCC
Confidence            999999988665     9999999999999999999999  8899999999999995   47899999999999887776


Q ss_pred             CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      ...+.+||+.|+|||.+.+.++. ..|+||.|...+.+.+                     |..||.......... .+.
T Consensus       165 ~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~---------------------g~~Pf~~~~~~~~~~-~i~  222 (307)
T d1a06a_         165 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC---------------------GYPPFYDENDAKLFE-QIL  222 (307)
T ss_dssp             --------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHH---------------------SSCSCCCSSHHHHHH-HHH
T ss_pred             eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHh---------------------CCCCCCCCCHHHHHH-HHh
Confidence            66778899999999654433221 2355555555544443                     333332211110000 111


Q ss_pred             hcccccc----CcCCc---cccccccccCCCCchHHHHhhcCccee
Q 019481          241 TITFLSA----LKITG---CKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       241 ~~~~~~~----~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      .......    +.++.   ++...||++||++|||++++++|||+.
T Consensus       223 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~  268 (307)
T d1a06a_         223 KAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA  268 (307)
T ss_dssp             TTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTT
T ss_pred             ccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhC
Confidence            1111111    12221   234467999999999999999999994

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-49  Score=343.63  Aligned_cols=237  Identities=18%  Similarity=0.107  Sum_probs=175.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||+||+|+++.+++.||+|+++... ....+.+.+|+++|++++|||||+++++|.+       .+..|++||||+|
T Consensus        30 ~G~fg~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~-------~~~~~ivmEy~~g  101 (293)
T d1yhwa1          30 QGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLV-------GDELWVVMEYLAG  101 (293)
T ss_dssp             CSSSCEEEEEEBTTTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------TTEEEEEEECCTT
T ss_pred             cCcCcEEEEEEECCCCCEEEEEEEeccc-ChHHHHHHHHHHHHHhCCCCCEeeEeEEEEE-------CCEEEEEEEecCC
Confidence            6999999999999999999999997533 2335678999999999999999999998764       3467899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-CCc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-NAD  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~~~  163 (340)
                      |+|.+++.+. .     +++..++.++.||+.||+|||+  ++|+||||||+|||++.+|++||+|||+|+.+..+ ...
T Consensus       102 g~L~~~~~~~-~-----l~~~~~~~i~~qi~~aL~yLH~--~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~  173 (293)
T d1yhwa1         102 GSLTDVVTET-C-----MDEGQIAAVCRECLQALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR  173 (293)
T ss_dssp             CBHHHHHHHS-C-----CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred             CcHHHHhhcc-C-----CCHHHHHHHHHHHHHHHHHHHH--CCCcccCCcHHHeEECCCCcEeeccchhheeeccccccc
Confidence            9999988753 2     9999999999999999999999  88999999999999999999999999999987653 344


Q ss_pred             ceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh--h
Q 019481          164 LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL--S  240 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~  240 (340)
                      ...+||+.|+|||.+.+.++. ..|+|+.|...                     .+|.+|..||.............  .
T Consensus       174 ~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil---------------------yemltG~~Pf~~~~~~~~~~~~~~~~  232 (293)
T d1yhwa1         174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMA---------------------IEMIEGEPPYLNENPLRALYLIATNG  232 (293)
T ss_dssp             CCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHH---------------------HHHHHSSCTTTTSCHHHHHHHHHHHC
T ss_pred             cccccCCCccChhhhcCCCCCchhceehHhHHH---------------------HHHhhCCCCCCCCCHHHHHHHHHhCC
Confidence            566899999999644432221 23444444444                     44444444443211111101000  0


Q ss_pred             hccccccCcCCc---cccccccccCCCCchHHHHhhcCcce
Q 019481          241 TITFLSALKITG---CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      .......+.++.   ++...||+.||++|||++++++|||+
T Consensus       233 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~  273 (293)
T d1yhwa1         233 TPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFL  273 (293)
T ss_dssp             SCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGG
T ss_pred             CCCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhh
Confidence            011111112221   22447799999999999999999999

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.8e-50  Score=346.07  Aligned_cols=241  Identities=16%  Similarity=0.097  Sum_probs=167.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||+||+|+++.+|+.||+|+++.. ......+.+.+|+++|++++|||||+++++|.+     .+...+|++||||+
T Consensus        14 ~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~-----~~~~~~~ivmEy~~   88 (269)
T d2java1          14 TGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID-----RTNTTLYIVMEYCE   88 (269)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC---------CEEEEEECCT
T ss_pred             cCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEe-----CCCCEEEEEEecCC
Confidence            689999999999999999999999863 334556778999999999999999999997642     23446789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCc-----eecCCCCCCcEEecCCCceEEeccccceeec
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQ-----VIYRDFKAPNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~-----iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      ||+|.+++.+... .+..+++..++.++.||++||+|||+  ++     |+||||||+|||++.++++||+|||+|+.+.
T Consensus        89 ~g~L~~~i~~~~~-~~~~l~e~~~~~i~~qi~~al~ylH~--~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~  165 (269)
T d2java1          89 GGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHR--RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN  165 (269)
T ss_dssp             TEEHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHH--HCC---------CCGGGEEECTTSCEEECCHHHHHHC-
T ss_pred             CCcHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHH--hcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecc
Confidence            9999999875321 01349999999999999999999998  54     9999999999999999999999999998876


Q ss_pred             ccC-CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHH
Q 019481          159 VEN-ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIA  236 (340)
Q Consensus       159 ~~~-~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (340)
                      .+. ...+.+||+.|+|||.+.+.++- ..|+|+.|...+.+.++.  .||.....                   ..   
T Consensus       166 ~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~--~Pf~~~~~-------------------~~---  221 (269)
T d2java1         166 HDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM--PPFTAFSQ-------------------KE---  221 (269)
T ss_dssp             ----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS--CSCCCSSH-------------------HH---
T ss_pred             cCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCC--CCCCCCCH-------------------HH---
Confidence            543 34567899999999654433322 235555555555544433  33222111                   10   


Q ss_pred             HhhhhccccccCcCCcccc-------ccccccCCCCchHHHHhhcCcce
Q 019481          237 TLLSTITFLSALKITGCKS-------EEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       237 ~~~~~~~~~~~~~~p~~~~-------~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                       ....+.....+.+|..++       ..||+.||.+|||++++++|||+
T Consensus       222 -~~~~i~~~~~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         222 -LAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             -HHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             -HHHHHHcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence             011111122233444443       36799999999999999999996

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-49  Score=353.88  Aligned_cols=183  Identities=19%  Similarity=0.110  Sum_probs=150.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||+||+|+++.+++.||+|+++........+.+.+|+++|++++|||||+++++|.+       ....++|||||+|
T Consensus        16 ~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-------~~~~~iVmEy~~g   88 (322)
T d1s9ja_          16 AGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-------DGEISICMEHMDG   88 (322)
T ss_dssp             CCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEEC-------SSEEEEEEECCTT
T ss_pred             cCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-------CCEEEEEEEcCCC
Confidence            689999999999999999999999875555566789999999999999999999998764       3467899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCC-ceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEK-QVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~-~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      |+|.+++.+.+.     +++..++.++.||++||+|||+  + +|+||||||+|||++.+|++||+|||+|+...+. ..
T Consensus        89 g~L~~~l~~~~~-----l~~~~~~~~~~qil~aL~yLH~--~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~-~~  160 (322)
T d1s9ja_          89 GSLDQVLKKAGR-----IPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-MA  160 (322)
T ss_dssp             EEHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHH--HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH-TC
T ss_pred             CcHHHHHhhcCC-----CCHHHHHHHHHHHHHHHHHHHH--hCCEEccccCHHHeeECCCCCEEEeeCCCccccCCC-cc
Confidence            999999988766     9999999999999999999997  4 6999999999999999999999999999876543 34


Q ss_pred             ceeeccceeeccCccccchhh-hhHhHhCCcccccccccc
Q 019481          164 LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~  202 (340)
                      .+.+||+.|+|||.+.+..+. ..|+||.|+..+++.++.
T Consensus       161 ~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~  200 (322)
T d1s9ja_         161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR  200 (322)
T ss_dssp             ---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             ccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCC
Confidence            567999999999644332221 235555555555554443

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-49  Score=344.12  Aligned_cols=234  Identities=18%  Similarity=0.156  Sum_probs=174.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||+||+|+++.+++.||+|++++..  .....+.+.+|+++|++++|||||+++++|+       +.+..|++||||
T Consensus        18 ~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~-------~~~~~~ivmEy~   90 (288)
T d1uu3a_          18 EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ-------DDEKLYFGLSYA   90 (288)
T ss_dssp             ECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEE-------CSSEEEEEECCC
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEE-------ECCEEEEEEEcc
Confidence            5899999999999999999999997522  2234567899999999999999999999775       445788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-  161 (340)
                      +||+|.+++...+.     +++..++.++.|++.||+|||+  ++|+||||||+|||+++++++||+|||+|+.+.... 
T Consensus        91 ~gg~L~~~~~~~~~-----l~e~~~~~~~~qi~~al~ylH~--~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~  163 (288)
T d1uu3a_          91 KNGELLKYIRKIGS-----FDETCTRFYTAEIVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK  163 (288)
T ss_dssp             TTEEHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred             CCCCHHHhhhccCC-----CCHHHHHHHHHHHHHHHHhhcc--ccEEcCcCCccccccCCCceEEecccccceecccCCc
Confidence            99999999998776     9999999999999999999999  889999999999999999999999999999875432 


Q ss_pred             --CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHh
Q 019481          162 --ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATL  238 (340)
Q Consensus       162 --~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (340)
                        ...+.+||+.|+|||.+.+.++. ..|+||.|...+.+.++.  .||.....                   ..... .
T Consensus       164 ~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~--~Pf~~~~~-------------------~~~~~-~  221 (288)
T d1uu3a_         164 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL--PPFRAGNE-------------------YLIFQ-K  221 (288)
T ss_dssp             ------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSS--CSSCCSSH-------------------HHHHH-H
T ss_pred             ccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCC--CCCCCcCH-------------------HHHHH-H
Confidence              33456899999999655443322 235666555555554433  33322211                   10000 0


Q ss_pred             hhhccccccCcCCccc-------cccccccCCCCchHHHH------hhcCcce
Q 019481          239 LSTITFLSALKITGCK-------SEEGYKNNSSLNPICQI------VNQHPFY  278 (340)
Q Consensus       239 ~~~~~~~~~~~~p~~~-------~~~~l~~dP~~R~t~~~------ll~hp~~  278 (340)
                      +.    ...+.+|..+       ...||+.||++|||+++      +++|||+
T Consensus       222 i~----~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff  270 (288)
T d1uu3a_         222 II----KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF  270 (288)
T ss_dssp             HH----TTCCCCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGG
T ss_pred             HH----cCCCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCcc
Confidence            00    1112333333       34679999999999987      5788888

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=8.4e-49  Score=345.91  Aligned_cols=234  Identities=20%  Similarity=0.214  Sum_probs=175.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||+||+|++..+++.||+|+++...  .....+.+.+|+++|++++|||||+++++|.+       .+..|++||||
T Consensus        25 ~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-------~~~~~iv~E~~   97 (309)
T d1u5ra_          25 HGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-------EHTAWLVMEYC   97 (309)
T ss_dssp             ECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-------TTEEEEEEECC
T ss_pred             cCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEE-------CCEEEEEEEec
Confidence            5899999999999999999999998632  34455779999999999999999999997753       34788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      ++|+|..++.....     +++..++.++.||++||+|||+  ++|+||||||+|||++.++++||+|||+|+....   
T Consensus        98 ~~g~l~~~~~~~~~-----l~e~~~~~i~~qi~~aL~yLH~--~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~---  167 (309)
T d1u5ra_          98 LGSASDLLEVHKKP-----LQEVEIAAVTHGALQGLAYLHS--HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP---  167 (309)
T ss_dssp             SEEHHHHHHHHTSC-----CCHHHHHHHHHHHHHHHHHHHH--TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS---
T ss_pred             CCCchHHHHHhCCC-----CCHHHHHHHHHHHHHHHHHHHh--CCEeccCCCcceEEECCCCCEEEeecccccccCC---
Confidence            99999877776555     9999999999999999999999  8899999999999999999999999999987644   


Q ss_pred             cceeeccceeeccCccccch---h-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHh
Q 019481          163 DLTALDTSSVSAQSGKTGME---M-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATL  238 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~---~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (340)
                      ..+.+||+.|+|||.+.+..   + ...|+||.|...+.+                     .+|..||..........  
T Consensus       168 ~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel---------------------~~g~~Pf~~~~~~~~~~--  224 (309)
T d1u5ra_         168 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL---------------------AERKPPLFNMNAMSALY--  224 (309)
T ss_dssp             BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHH---------------------HHSSCTTTTSCHHHHHH--
T ss_pred             CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHH---------------------HHCCCCCCCCCHHHHHH--
Confidence            34568999999996543211   1 123555555444444                     44444433211111101  


Q ss_pred             hhhccccccCcC-Cc-------cccccccccCCCCchHHHHhhcCcceee
Q 019481          239 LSTITFLSALKI-TG-------CKSEEGYKNNSSLNPICQIVNQHPFYIR  280 (340)
Q Consensus       239 ~~~~~~~~~~~~-p~-------~~~~~~l~~dP~~R~t~~~ll~hp~~~~  280 (340)
                        .+.....+.+ +.       ++...||++||.+|||++++++|||+.+
T Consensus       225 --~i~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~  272 (309)
T d1u5ra_         225 --HIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR  272 (309)
T ss_dssp             --HHHHSCCCCCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred             --HHHhCCCCCCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcC
Confidence              0111111111 11       2344689999999999999999999943

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-49  Score=344.58  Aligned_cols=238  Identities=18%  Similarity=0.118  Sum_probs=180.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc-----hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP-----LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-----~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      .|+||+||+|+++.+|+.||+|++++...     ....+.+.+|+++|++++|||||+++++|+       +....|++|
T Consensus        20 ~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~-------~~~~~~iv~   92 (293)
T d1jksa_          20 SGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE-------NKTDVILIL   92 (293)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE-------CSSEEEEEE
T ss_pred             cCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-------ECCEEEEEE
Confidence            58999999999999999999999975321     123577999999999999999999999776       445788999


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC----ceEEeccccce
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF----KCNLSDFSTAK  155 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~----~~kl~DFGla~  155 (340)
                      |||+||+|.+++...+.     +++..++.++.||++||+|||+  ++|+||||||+|||++.++    .+||+|||+|+
T Consensus        93 E~~~gg~L~~~i~~~~~-----l~~~~~~~~~~qi~~al~yLH~--~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~  165 (293)
T d1jksa_          93 ELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH  165 (293)
T ss_dssp             ECCCSCBHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             EcCCCccccchhccccc-----cchhHHHHHHHHHHHHHHhhhh--cceeecccccceEEEecCCCcccceEecchhhhh
Confidence            99999999999988765     9999999999999999999999  8899999999999998876    49999999999


Q ss_pred             eecccCCcceeeccceeeccCccccchh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHH
Q 019481          156 VSAVENADLTALDTSSVSAQSGKTGMEM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLL  234 (340)
Q Consensus       156 ~~~~~~~~~~~~gt~~~~~p~~~~~~~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (340)
                      .........+..||+.|+|||.+.+..+ ...|+||.|...+.+.++.  .||.+.....+...+.              
T Consensus       166 ~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~--~Pf~~~~~~~~~~~i~--------------  229 (293)
T d1jksa_         166 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA--SPFLGDTKQETLANVS--------------  229 (293)
T ss_dssp             ECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS--CSSCCSSHHHHHHHHH--------------
T ss_pred             hcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCC--CCCCCCCHHHHHHHHH--------------
Confidence            9887777777889999999964433222 1235666555555554443  3333222111111111              


Q ss_pred             HHHhhhhcccccc----CcCC---ccccccccccCCCCchHHHHhhcCcce
Q 019481          235 IATLLSTITFLSA----LKIT---GCKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       235 ~~~~~~~~~~~~~----~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                            .......    +.++   .++...||+.||++|||++++++|||+
T Consensus       230 ------~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~  274 (293)
T d1jksa_         230 ------AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI  274 (293)
T ss_dssp             ------TTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTT
T ss_pred             ------hcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCccc
Confidence                  1111111    1222   134557899999999999999999999

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-49  Score=344.89  Aligned_cols=242  Identities=18%  Similarity=0.120  Sum_probs=175.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||+||+|+++.+++.||+|+++... ....+.+.+|+++|++++|||||+++++|.+       .+.++++||||++
T Consensus        22 ~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-------~~~~~lvmEy~~~   93 (288)
T d2jfla1          22 DGAFGKVYKAQNKETSVLAAAKVIDTKS-EEELEDYMVEIDILASCDHPNIVKLLDAFYY-------ENNLWILIEFCAG   93 (288)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEECSS-SGGGGGTHHHHHHHHHCCCTTBCCEEEEEEE-------TTEEEEEEECCTT
T ss_pred             eCCCcEEEEEEECCCCeEEEEEEECcCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-------CCeEEEEEecCCC
Confidence            5899999999999999999999998543 3445778999999999999999999997763       3478899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-CCc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-NAD  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~~~  163 (340)
                      |+|.+++.+...    .+++..++.++.||++||+|||+  ++|+||||||+|||++.++++||+|||+|+..... ...
T Consensus        94 g~L~~~~~~~~~----~l~e~~~~~i~~qi~~gL~ylH~--~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~  167 (288)
T d2jfla1          94 GAVDAVMLELER----PLTESQIQVVCKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRR  167 (288)
T ss_dssp             EEHHHHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHH
T ss_pred             CcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHH--CCEEEeecChhheeECCCCCEEEEechhhhccCCCcccc
Confidence            999999876543    39999999999999999999999  88999999999999999999999999999876543 233


Q ss_pred             ceeeccceeeccCccccc-----hh-hhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHH
Q 019481          164 LTALDTSSVSAQSGKTGM-----EM-KMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIAT  237 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~-----~~-~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (340)
                      .+.+||+.|+|||.+.+.     ++ ...|+||.|...+.+.++.  .||.......+             ....   . 
T Consensus       168 ~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~--~Pf~~~~~~~~-------------~~~i---~-  228 (288)
T d2jfla1         168 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE--PPHHELNPMRV-------------LLKI---A-  228 (288)
T ss_dssp             TCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSS--CTTTTSCGGGH-------------HHHH---H-
T ss_pred             cccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCC--CCCCCCCHHHH-------------HHHH---H-
Confidence            467899999999643211     11 1235555555555544433  33322111100             0000   0 


Q ss_pred             hhhhccccccCcCCc---cccccccccCCCCchHHHHhhcCccee
Q 019481          238 LLSTITFLSALKITG---CKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       238 ~~~~~~~~~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ..........+..+.   ++-..||+.||++|||++++++|||+.
T Consensus       229 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~  273 (288)
T d2jfla1         229 KSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVT  273 (288)
T ss_dssp             HSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGC
T ss_pred             cCCCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccC
Confidence            000000000111111   223468999999999999999999994

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=6.2e-49  Score=352.72  Aligned_cols=239  Identities=11%  Similarity=0.081  Sum_probs=179.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|++..+++.||+|++++.. ....+.+.+|+++|++++|||||+++++|+       +....|++||||+|
T Consensus        39 ~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~-------~~~~~~ivmE~~~g  110 (352)
T d1koba_          39 SGAFGVVHRCVEKATGRVFVAKFINTPY-PLDKYTVKNEISIMNQLHHPKLINLHDAFE-------DKYEMVLILEFLSG  110 (352)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCSTTBCCEEEEEE-------CSSEEEEEEECCCC
T ss_pred             cCCCeEEEEEEECCCCCEEEEEEECCcc-hhHHHHHHHHHHHHHhCCCCCCCcEEEEEE-------ECCEEEEEEEcCCC
Confidence            5899999999999999999999998643 344567889999999999999999999776       44578899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEec--CCCceEEeccccceeecccCC
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLD--ETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~--~~~~~kl~DFGla~~~~~~~~  162 (340)
                      |+|.+.+.....    .+++..++.++.||+.||+|||+  ++|+||||||+|||++  .++++||+|||+|+.+.....
T Consensus       111 g~L~~~~~~~~~----~l~e~~~~~i~~qi~~aL~ylH~--~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~  184 (352)
T d1koba_         111 GELFDRIAAEDY----KMSEAEVINYMRQACEGLKHMHE--HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI  184 (352)
T ss_dssp             CBHHHHTTCTTC----CBCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred             ChHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHH--CCeeecccccccccccccCCCeEEEeecccceecCCCCc
Confidence            999998877653    39999999999999999999999  8899999999999998  578999999999999888777


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      ..+.+||+.|+||+.+.+-.+- ..|+|+.|+..+.                     |.+|..||.......... .+..
T Consensus       185 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye---------------------lltG~~Pf~~~~~~~~~~-~i~~  242 (352)
T d1koba_         185 VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYV---------------------LLSGLSPFAGEDDLETLQ-NVKR  242 (352)
T ss_dssp             EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHH---------------------HHHSCCSSCCSSHHHHHH-HHHH
T ss_pred             eeeccCcccccCHHHHcCCCCCCccchHHHHHHHHH---------------------HHhCCCCCCCCCHHHHHH-HHHh
Confidence            7788999999999544332221 1244444444444                     444444433211111111 1111


Q ss_pred             cccccc----CcCCc---cccccccccCCCCchHHHHhhcCccee
Q 019481          242 ITFLSA----LKITG---CKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       242 ~~~~~~----~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ......    +.++.   ++...||++||.+|||++++++|||+.
T Consensus       243 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~  287 (352)
T d1koba_         243 CDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK  287 (352)
T ss_dssp             CCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTS
T ss_pred             CCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhC
Confidence            111111    12222   234478999999999999999999993

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-48  Score=348.60  Aligned_cols=234  Identities=15%  Similarity=0.094  Sum_probs=181.7

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||+||+|+++.+++.||+|++++..  .....+.+.+|+.+|++++|||||+++++|+       +..+.|++||||
T Consensus        15 ~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-------~~~~~~iv~ey~   87 (337)
T d1o6la_          15 KGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ-------THDRLCFVMEYA   87 (337)
T ss_dssp             ECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEE-------CSSEEEEEEECC
T ss_pred             cCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeec-------cccccccceecc
Confidence            6899999999999999999999998532  2234577899999999999999999999776       445788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc-cC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV-EN  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~-~~  161 (340)
                      +||+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.+|++||+|||+|+.... ..
T Consensus        88 ~gg~L~~~~~~~~~-----~~e~~~~~~~~qil~al~ylH~--~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~  160 (337)
T d1o6la_          88 NGGELFFHLSRERV-----FTEERARFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA  160 (337)
T ss_dssp             TTCBHHHHHHHHSC-----CCHHHHHHHHHHHHHHHHHHHH--TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred             CCCchhhhhhcccC-----CcHHHHHHHHHHHhhhhhhhhh--cCccccccCHHHeEecCCCCEEEeecccccccccCCc
Confidence            99999999998776     9999999999999999999999  8899999999999999999999999999987654 44


Q ss_pred             CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (340)
                      ...+.+||+.|+|||.+.+.++- ..|+|+.|...+.+.++.  .||.......+                   .. .+ 
T Consensus       161 ~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~--~pf~~~~~~~~-------------------~~-~i-  217 (337)
T d1o6la_         161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHERL-------------------FE-LI-  217 (337)
T ss_dssp             CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSS--CSSCCSSHHHH-------------------HH-HH-
T ss_pred             ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCC--CCCCCcCHHHH-------------------HH-HH-
Confidence            55678999999999765544332 236666665555554443  33322221100                   00 00 


Q ss_pred             hccccccCcCCccccc-------cccccCCCCchH-----HHHhhcCcce
Q 019481          241 TITFLSALKITGCKSE-------EGYKNNSSLNPI-----CQIVNQHPFY  278 (340)
Q Consensus       241 ~~~~~~~~~~p~~~~~-------~~l~~dP~~R~t-----~~~ll~hp~~  278 (340)
                         ....+.+|..+++       .||++||++|++     ++++++|||+
T Consensus       218 ---~~~~~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f  264 (337)
T d1o6la_         218 ---LMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF  264 (337)
T ss_dssp             ---HHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGG
T ss_pred             ---hcCCCCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCccc
Confidence               1112333444433       679999999994     8999999999

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=7.2e-49  Score=352.01  Aligned_cols=239  Identities=13%  Similarity=0.122  Sum_probs=180.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|+++.+|+.||+|++.... ....+.+.+|+++|++++|||||+++++|.+       .+..|++||||+|
T Consensus        36 ~G~fg~Vy~~~~~~~g~~vAvK~i~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~-------~~~~~ivmE~~~g  107 (350)
T d1koaa2          36 TGAFGVVHRVTERATGNNFAAKFVMTPH-ESDKETVRKEIQTMSVLRHPTLVNLHDAFED-------DNEMVMIYEFMSG  107 (350)
T ss_dssp             EETTEEEEEEEETTTTEEEEEEEECCCS-HHHHHHHHHHHHHHHHTCCTTBCCEEEEEEE-------TTEEEEEECCCCS
T ss_pred             cCcCeEEEEEEECCCCCEEEEEEEcccc-hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEE-------CCEEEEEEEcCCC
Confidence            5889999999999999999999997543 3456778999999999999999999997763       4478899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC--CCceEEeccccceeecccCC
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE--TFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~--~~~~kl~DFGla~~~~~~~~  162 (340)
                      |+|.+++.....    .+++..++.++.||+.||+|||+  ++|+||||||+|||++.  ++.+||+|||+|+.+.....
T Consensus       108 g~L~~~l~~~~~----~l~e~~~~~i~~qi~~aL~ylH~--~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~  181 (350)
T d1koaa2         108 GELFEKVADEHN----KMSEDEAVEYMRQVCKGLCHMHE--NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS  181 (350)
T ss_dssp             CBHHHHHTCTTS----CBCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSC
T ss_pred             CCHHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHh--cCCeeeeechhHeeeccCCCCeEEEeecchheecccccc
Confidence            999999976543    39999999999999999999999  88999999999999964  68899999999999888777


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      ..+.+||+.|+|||.+.+..+- ..|+|+.|...+.+.++.  .||.+.....                 .  .. .+..
T Consensus       182 ~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~--~Pf~~~~~~~-----------------~--~~-~i~~  239 (350)
T d1koaa2         182 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL--SPFGGENDDE-----------------T--LR-NVKS  239 (350)
T ss_dssp             EEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSS--CSSCCSSHHH-----------------H--HH-HHHH
T ss_pred             cceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCC--CCCCCCCHHH-----------------H--HH-HHHh
Confidence            7788999999999654433322 235666555555554433  3332221100                 0  00 1111


Q ss_pred             cccccc----CcCCc---cccccccccCCCCchHHHHhhcCccee
Q 019481          242 ITFLSA----LKITG---CKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       242 ~~~~~~----~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ..+...    +.++.   ++...||+.||++|||++++++|||+.
T Consensus       240 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~  284 (350)
T d1koaa2         240 CDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLT  284 (350)
T ss_dssp             TCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTS
T ss_pred             CCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccC
Confidence            111111    11221   234478999999999999999999993

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=2.7e-47  Score=331.31  Aligned_cols=245  Identities=16%  Similarity=0.142  Sum_probs=179.4

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc--------hhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCccee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP--------LQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYC   75 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~--------~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~   75 (340)
                      .|+||+||+|++..+++.||+|++++...        ....+.+.+|+.++++++ |||||+++++|.       +.++.
T Consensus        13 ~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~-------~~~~~   85 (277)
T d1phka_          13 RGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE-------TNTFF   85 (277)
T ss_dssp             ECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE-------CSSEE
T ss_pred             cCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecc-------cCcce
Confidence            58999999999999999999999975321        123356889999999997 999999999775       44578


Q ss_pred             eeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccce
Q 019481           76 WKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAK  155 (340)
Q Consensus        76 ~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~  155 (340)
                      |++||||+||||.++++.++.     +++..++.++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+|+
T Consensus        86 ~ivmE~~~~g~L~~~l~~~~~-----l~e~~~~~~~~qi~~al~~lH~--~~ivHrDlkp~Nill~~~~~~kl~DFG~a~  158 (277)
T d1phka_          86 FLVFDLMKKGELFDYLTEKVT-----LSEKETRKIMRALLEVICALHK--LNIVHRDLKPENILLDDDMNIKLTDFGFSC  158 (277)
T ss_dssp             EEEEECCTTCBHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             EEEEEcCCCchHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH--cCCcccccccceEEEcCCCCeEEccchhee
Confidence            899999999999999988766     9999999999999999999999  789999999999999999999999999999


Q ss_pred             eecccCCcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHH
Q 019481          156 VSAVENADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLI  235 (340)
Q Consensus       156 ~~~~~~~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (340)
                      .+..+......+||+.|++|+.+.+.+..       ....+...  .+.|+     +|++..+|.+|..||.........
T Consensus       159 ~~~~~~~~~~~~gt~~y~~PE~~~~~~~~-------~~~~~~~~--~Diws-----lGvilyeml~g~~Pf~~~~~~~~~  224 (277)
T d1phka_         159 QLDPGEKLREVCGTPSYLAPEIIECSMND-------NHPGYGKE--VDMWS-----TGVIMYTLLAGSPPFWHRKQMLML  224 (277)
T ss_dssp             ECCTTCCBCCCCSCGGGCCHHHHHHHHCT-------TSCCBCTH--HHHHH-----HHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             EccCCCceeeeeccCCCCCHHHhhccccc-------cCCCCCch--heEcc-----cchhhhhhccCCCCCCCCCHHHHH
Confidence            88776666677899988888544332211       11111111  12244     444444444444444332211111


Q ss_pred             HHhhhhcccccc----CcCCc---cccccccccCCCCchHHHHhhcCcce
Q 019481          236 ATLLSTITFLSA----LKITG---CKSEEGYKNNSSLNPICQIVNQHPFY  278 (340)
Q Consensus       236 ~~~~~~~~~~~~----~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~  278 (340)
                      ... ..-.....    +.+++   ++-..||+.||++|||++++++|||+
T Consensus       225 ~~i-~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~  273 (277)
T d1phka_         225 RMI-MSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF  273 (277)
T ss_dssp             HHH-HHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGG
T ss_pred             HHH-HhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHH
Confidence            101 11111111    12222   22347899999999999999999999

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-48  Score=342.57  Aligned_cols=242  Identities=12%  Similarity=0.048  Sum_probs=179.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||+||+|+++.+++.||+|++++..  .....+.+|+++|++++|||||+++++|++       .+.+|++||||+|
T Consensus        15 ~G~fg~Vy~~~~~~~~~~~AiK~i~~~~--~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-------~~~~~lvmE~~~g   85 (321)
T d1tkia_          15 RGEFGIVHRCVETSSKKTYMAKFVKVKG--TDQVLVKKEISILNIARHRNILHLHESFES-------MEELVMIFEFISG   85 (321)
T ss_dssp             ECSSEEEEEEEETTTTEEEEEEEECCCT--HHHHHHHHHHHHHHHSCCTTBCCEEEEEEE-------TTEEEEEECCCCC
T ss_pred             cCCCeEEEEEEECCCCcEEEEEEEcCCc--ccHHHHHHHHHHHHhCCCCCCCeEEEEEEE-------CCEEEEEEecCCC
Confidence            5899999999999999999999997543  334568899999999999999999997763       3478899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC--CCceEEeccccceeecccCC
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE--TFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~--~~~~kl~DFGla~~~~~~~~  162 (340)
                      |+|.+++...+.    .+++.+++.++.||++||+|||+  ++|+||||||+|||++.  .+++||+|||+++.......
T Consensus        86 g~L~~~i~~~~~----~l~e~~~~~i~~qi~~al~yLH~--~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~  159 (321)
T d1tkia_          86 LDIFERINTSAF----ELNEREIVSYVHQVCEALQFLHS--HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN  159 (321)
T ss_dssp             CBHHHHHTSSSC----CCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred             CcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHH--cCCCcccccccceeecCCCceEEEEcccchhhccccCCc
Confidence            999999987653    39999999999999999999999  88999999999999985  45899999999998877776


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      ..+.+||+.|++|+...+..+. ..|+|+.|...|.+.++.  .||.......+...+..+...++              
T Consensus       160 ~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~--~Pf~~~~~~~~~~~i~~~~~~~~--------------  223 (321)
T d1tkia_         160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGI--NPFLAETNQQIIENIMNAEYTFD--------------  223 (321)
T ss_dssp             EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSS--CTTCCSSHHHHHHHHHHTCCCCC--------------
T ss_pred             ccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCC--CCCCCCCHHHHHHHHHhCCCCCC--------------
Confidence            7778899999998643332222 235666555555554443  33333222111111111100000              


Q ss_pred             ccccccCcCC---ccccccccccCCCCchHHHHhhcCccee
Q 019481          242 ITFLSALKIT---GCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       242 ~~~~~~~~~p---~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                        ....+.++   .++...||+.||.+|||++++++|||+.
T Consensus       224 --~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~  262 (321)
T d1tkia_         224 --EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLK  262 (321)
T ss_dssp             --HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred             --hhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhc
Confidence              00001122   2345578999999999999999999994

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.1e-47  Score=340.04  Aligned_cols=236  Identities=17%  Similarity=0.117  Sum_probs=176.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||+||+|+++.+|+.||+|++++..  .....+.+.+|+.+|++++|||||+++++|.       +....|++||||
T Consensus        14 ~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~-------~~~~~~ivmE~~   86 (316)
T d1fota_          14 TGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQ-------DAQQIFMIMDYI   86 (316)
T ss_dssp             ECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEE-------CSSEEEEEECCC
T ss_pred             cCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEe-------eCCeeeeEeeec
Confidence            5899999999999999999999997522  2234577899999999999999999999775       445788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      +||+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.+|++||+|||+|+.....  
T Consensus        87 ~gg~l~~~~~~~~~-----~~~~~~~~~~~qi~~al~~lH~--~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~--  157 (316)
T d1fota_          87 EGGELFSLLRKSQR-----FPNPVAKFYAAEVCLALEYLHS--KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV--  157 (316)
T ss_dssp             CSCBHHHHHHHTSS-----CCHHHHHHHHHHHHHHHHHHHT--TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC--
T ss_pred             CCcccccccccccc-----ccccHHHHHHHHHHHhhhhhcc--CcEEccccCchheeEcCCCCEEEecCccceEeccc--
Confidence            99999999998776     8999999999999999999999  88999999999999999999999999999887543  


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      ..+.+||+.|+|||.+.+..+. ..|+|+.|...+.+                     .+|..||.......... .+..
T Consensus       158 ~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyem---------------------ltG~~Pf~~~~~~~~~~-~i~~  215 (316)
T d1fota_         158 TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEM---------------------LAGYTPFYDSNTMKTYE-KILN  215 (316)
T ss_dssp             BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHH---------------------HHSSCTTCCSSHHHHHH-HHHH
T ss_pred             cccccCcccccCHHHHcCCCCCchhhccccchhHHHH---------------------HhCCCCCCCcCHHHHHH-HHHc
Confidence            3467899999999654432222 23555555444444                     44444332211111111 1111


Q ss_pred             ccccccCcCCcc---ccccccccCCCCch-----HHHHhhcCcce
Q 019481          242 ITFLSALKITGC---KSEEGYKNNSSLNP-----ICQIVNQHPFY  278 (340)
Q Consensus       242 ~~~~~~~~~p~~---~~~~~l~~dP~~R~-----t~~~ll~hp~~  278 (340)
                      ....-++.++..   +...||++||.+|+     |++++++|||+
T Consensus       216 ~~~~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f  260 (316)
T d1fota_         216 AELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWF  260 (316)
T ss_dssp             CCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGG
T ss_pred             CCCCCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCccc
Confidence            111111222222   23367999999996     89999999999

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-47  Score=338.88  Aligned_cols=241  Identities=14%  Similarity=0.069  Sum_probs=184.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||+||+|++..+++.||+|+++.      .+.+.+|++++.++ +|||||+++++|++.   .....+.|++||||+
T Consensus        22 ~G~fg~Vy~a~~~~~~~~vAiK~i~~------~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~---~~~~~~~~ivmEy~~   92 (335)
T d2ozaa1          22 LGINGKVLQIFNKRTQEKFALKMLQD------CPKARREVELHWRASQCPHIVRIVDVYENL---YAGRKCLLIVMECLD   92 (335)
T ss_dssp             ECSSCEEEEEEETTTCCEEEEEEEEC------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE---ETTEEEEEEEEECCC
T ss_pred             eccCeEEEEEEECCCCCEEEEEEECC------cHHHHHHHHHHHHhcCCCCCCeEEEEEeec---ccCCCEEEEEEECCC
Confidence            68999999999999999999999963      23467899987665 799999999988642   234457899999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC---CCceEEeccccceeeccc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE---TFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~---~~~~kl~DFGla~~~~~~  160 (340)
                      ||||.+++...+.   ..+++.+++.|+.||+.||+|||+  ++|+||||||+|||++.   ++.+||+|||+|+.....
T Consensus        93 gg~L~~~i~~~~~---~~l~e~~~~~i~~qi~~al~ylH~--~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~  167 (335)
T d2ozaa1          93 GGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH  167 (335)
T ss_dssp             SEEHHHHHHSCSC---CCEEHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCC
T ss_pred             CCcHHHHHHhcCC---CCcCHHHHHHHHHHHHHHHHHHHH--cCCccccccccccccccccccccccccccceeeeccCC
Confidence            9999999987643   359999999999999999999999  88999999999999985   567999999999988877


Q ss_pred             CCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccc----cCCCccCCchhH-----HHHH
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKN----TRPNLKTENETW-----NNFL  230 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~-----~~~~  230 (340)
                      ....+.+||+.|+||+.+.+..+. ..|+|+.|+..+.+.++.  .||.+.....    +...+..+...+     +...
T Consensus       168 ~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~--~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s  245 (335)
T d2ozaa1         168 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY--PPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS  245 (335)
T ss_dssp             CCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSS--CSCEETTCC--------CCCSCSSSCCTTHHHHSC
T ss_pred             CccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCC--CCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCC
Confidence            777788999999999877665553 347888777777776655  4443332211    111222222211     1111


Q ss_pred             HHHHHHHhhhhccccccCcCCccccccccccCCCCchHHHHhhcCccee
Q 019481          231 YLLLIATLLSTITFLSALKITGCKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                      ..+                  .++...||++||++|||++++++|||+.
T Consensus       246 ~~~------------------~~li~~~L~~dP~~R~s~~eil~hp~~~  276 (335)
T d2ozaa1         246 EEV------------------KMLIRNLLKTEPTQRMTITEFMNHPWIM  276 (335)
T ss_dssp             HHH------------------HHHHHHHSCSSTTTSCCHHHHHHSHHHH
T ss_pred             HHH------------------HHHHHHHccCChhHCcCHHHHHcCHHhh
Confidence            110                  2234478999999999999999999993

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.5e-47  Score=340.50  Aligned_cols=232  Identities=13%  Similarity=0.081  Sum_probs=176.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|+++.+|+.||+|++++..  .....+.+.+|+++|++++|||||+++++|.       +...+++++||+
T Consensus        51 ~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-------~~~~~~~v~e~~  123 (350)
T d1rdqe_          51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK-------DNSNLYMVMEYV  123 (350)
T ss_dssp             ECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE-------CSSEEEEEEECC
T ss_pred             cCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccc-------cccccccccccc
Confidence            6899999999999999999999997522  2233567899999999999999999999775       444788999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      .+|+|.+++...+.     +++..++.++.||+.||+|||+  ++|+||||||+|||++.+|++||+|||+|+.+...  
T Consensus       124 ~~g~l~~~l~~~~~-----l~e~~~~~i~~qi~~aL~yLH~--~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~--  194 (350)
T d1rdqe_         124 AGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--  194 (350)
T ss_dssp             TTCBHHHHHHHHCC-----CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred             cccchhhhHhhcCC-----CCHHHHHHHHHHHHHHHHHHHh--CCEecCcCCHHHcccCCCCCEEeeeceeeeecccc--
Confidence            99999999988776     9999999999999999999999  88999999999999999999999999999987543  


Q ss_pred             cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhh
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLST  241 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (340)
                      ..+.+||+.|+|||.+.+-++. ..|+|+.|...|.+.++.                     .||.......... .+. 
T Consensus       195 ~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~---------------------~Pf~~~~~~~~~~-~i~-  251 (350)
T d1rdqe_         195 TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGY---------------------PPFFADQPIQIYE-KIV-  251 (350)
T ss_dssp             BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS---------------------CSSCCSSHHHHHH-HHH-
T ss_pred             cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCC---------------------CCCCCcCHHHHHH-HHh-
Confidence            4467899999999655443322 235555555555444433                     3332211110000 000 


Q ss_pred             ccccccCcCCccc-------cccccccCCCCch-----HHHHhhcCcce
Q 019481          242 ITFLSALKITGCK-------SEEGYKNNSSLNP-----ICQIVNQHPFY  278 (340)
Q Consensus       242 ~~~~~~~~~p~~~-------~~~~l~~dP~~R~-----t~~~ll~hp~~  278 (340)
                         ...+.+|..+       ...||++||.+|+     |++++++|||+
T Consensus       252 ---~~~~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f  297 (350)
T d1rdqe_         252 ---SGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF  297 (350)
T ss_dssp             ---HCCCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGG
T ss_pred             ---cCCCCCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccc
Confidence               1112223333       3367999999984     89999999999

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.9e-45  Score=330.42  Aligned_cols=236  Identities=18%  Similarity=0.074  Sum_probs=176.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHH---HHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDD---GKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~---~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      .|+||.||+|+++.+|+.||+|++++..  .......+.   +|+++++.++|||||+++++|.+       .+..|++|
T Consensus        14 ~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~-------~~~~~ivm   86 (364)
T d1omwa3          14 RGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-------PDKLSFIL   86 (364)
T ss_dssp             ECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC-------SSEEEEEE
T ss_pred             cCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEE-------CCEEEEEE
Confidence            5899999999999999999999997421  111222333   44677788889999999997763       44778999


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      |||+||+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.+|.+||+|||+|+.+..
T Consensus        87 E~~~gg~L~~~l~~~~~-----~~e~~~~~~~~qi~~aL~ylH~--~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~  159 (364)
T d1omwa3          87 DLMNGGDLHYHLSQHGV-----FSEADMRFYAAEIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDFSK  159 (364)
T ss_dssp             CCCCSCBHHHHHHHHCS-----CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEECSSSCEEECCCTTCEECSS
T ss_pred             EecCCCcHHHHHHhccc-----ccHHHHHHHHHHHHHHHHHHHH--CCccceeeccceeEEcCCCcEEEeeeceeeecCC
Confidence            99999999999988776     9999999999999999999999  8899999999999999999999999999997765


Q ss_pred             cCCcceeeccceeeccCcccc-chhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHH
Q 019481          160 ENADLTALDTSSVSAQSGKTG-MEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIAT  237 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~~~~~-~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (340)
                      . .....+||+.|+|||.+.. ..+- ..|+||.|+..|.+.++.  .||.......              ...      
T Consensus       160 ~-~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~--~Pf~~~~~~~--------------~~~------  216 (364)
T d1omwa3         160 K-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH--SPFRQHKTKD--------------KHE------  216 (364)
T ss_dssp             S-CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSS--CSSCSSCSSC--------------HHH------
T ss_pred             C-cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCC--CCCCCCCHHH--------------HHH------
Confidence            4 3456789999999976542 2221 346777777666665554  3333221110              000      


Q ss_pred             hhhhccccccCcCCccc-------cccccccCCCCchH-----HHHhhcCcce
Q 019481          238 LLSTITFLSALKITGCK-------SEEGYKNNSSLNPI-----CQIVNQHPFY  278 (340)
Q Consensus       238 ~~~~~~~~~~~~~p~~~-------~~~~l~~dP~~R~t-----~~~ll~hp~~  278 (340)
                       .........+..|..+       ...||++||++|||     |+++++|||+
T Consensus       217 -~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f  268 (364)
T d1omwa3         217 -IDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF  268 (364)
T ss_dssp             -HHHHSSSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGG
T ss_pred             -HHHhcccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccc
Confidence             0111122223333333       33679999999999     7999999999

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.2e-46  Score=326.96  Aligned_cols=240  Identities=14%  Similarity=0.112  Sum_probs=154.0

Q ss_pred             CCcceEEEEEEcCCCCc---eEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRD---DVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~---~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||+||+|+++.+++   .||+|.+.........+.+.+|+++|++++|||||++++++.       +...++++|||
T Consensus        36 ~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~-------~~~~~~iv~Ey  108 (299)
T d1jpaa_          36 AGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVT-------KSTPVMIITEF  108 (299)
T ss_dssp             ECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-------SSSSCEEEEEC
T ss_pred             eCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEe-------eCCEEEEEEEe
Confidence            59999999999877664   588998876556667788999999999999999999999765       33467899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      |++|+|.+++.....    .+++.++..++.||++||+|||+  ++|+||||||+|||++.++++||+|||+|+.+....
T Consensus       109 ~~~g~L~~~~~~~~~----~l~~~~~~~i~~qia~gl~yLH~--~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~  182 (299)
T d1jpaa_         109 MENGSLDSFLRQNDG----QFTVIQLVGMLRGIAAGMKYLAD--MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT  182 (299)
T ss_dssp             CTTEEHHHHHHTTTT----CSCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred             cCCCcceeeeccccC----CCCHHHHHHHHHHHHHHHHHHhh--CCCccCccccceEEECCCCcEEECCcccceEccCCC
Confidence            999999999887654    39999999999999999999999  889999999999999999999999999999876644


Q ss_pred             CcceeeccceeeccCccccchhhhhHhHhCCccccccccccccCCCCCCcccccCCCccC-CchhHHHHHHHHHHHHhhh
Q 019481          162 ADLTALDTSSVSAQSGKTGMEMKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKT-ENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       162 ~~~~~~gt~~~~~p~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~  240 (340)
                      ...+..++....+|..|++||+....       .+..  ..+.|+     .|++..++.+ |..||..........    
T Consensus       183 ~~~~~~~~~~~~~t~~y~aPE~~~~~-------~~~~--~sDvwS-----~Gvvl~el~t~g~~Pf~~~~~~~~~~----  244 (299)
T d1jpaa_         183 SDPTYTSALGGKIPIRWTAPEAIQYR-------KFTS--ASDVWS-----YGIVMWEVMSYGERPYWDMTNQDVIN----  244 (299)
T ss_dssp             -------------CGGGSCHHHHHSC-------CCCH--HHHHHH-----HHHHHHHHHTTSCCTTTTCCHHHHHH----
T ss_pred             CcceeeecccccCCccccCHHHHhcC-------CCCc--cccccc-----chHHHHHHHhCCCCCCCCCCHHHHHH----
Confidence            33333332223333333333443210       0111  122244     4444444443 444443322111111    


Q ss_pred             hccccccCcCCccc-------cccccccCCCCchHHHHhhcC
Q 019481          241 TITFLSALKITGCK-------SEEGYKNNSSLNPICQIVNQH  275 (340)
Q Consensus       241 ~~~~~~~~~~p~~~-------~~~~l~~dP~~R~t~~~ll~h  275 (340)
                      .+..+..+.+|...       -..||+.||++|||+++++++
T Consensus       245 ~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         245 AIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            11112222223222       347899999999999988654

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-46  Score=332.67  Aligned_cols=234  Identities=16%  Similarity=0.074  Sum_probs=173.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC--chhhHHHHHHHHHHhh-hcCCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT--PLQLRRDDDGKLDSLE-EIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~~E~~~l~-~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||+||+|+++.+++.||+|++++..  .....+.+.+|..++. .++|||||+++++|+       +.+..|++|||
T Consensus        12 ~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~-------~~~~~yivmEy   84 (320)
T d1xjda_          12 KGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ-------TKENLFFVMEY   84 (320)
T ss_dssp             ECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEE-------CSSEEEEEEEC
T ss_pred             cCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEc-------cCCceeEEEee
Confidence            6899999999999999999999997522  1233456777877765 689999999999776       44578899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-  160 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-  160 (340)
                      |++|+|.+++.....     +++..++.++.||+.||+|||+  ++|+||||||+|||++.++++||+|||+|+..... 
T Consensus        85 ~~~g~L~~~i~~~~~-----~~e~~~~~~~~qi~~al~ylH~--~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~  157 (320)
T d1xjda_          85 LNGGDLMYHIQSCHK-----FDLSRATFYAAEIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD  157 (320)
T ss_dssp             CTTCBHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHHHH--TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred             cCCCcHHHHhhccCC-----CCHHHHHHHHHHHHHHHHHHHh--CCeeeccCcccceeecCCCceeccccchhhhccccc
Confidence            999999999998776     9999999999999999999999  88999999999999999999999999999876543 


Q ss_pred             CCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhh
Q 019481          161 NADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLL  239 (340)
Q Consensus       161 ~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (340)
                      ......+||+.|+||+...+.++. ..|+||.|...+.+                     .+|..||.......... . 
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyem---------------------ltG~~PF~~~~~~~~~~-~-  214 (320)
T d1xjda_         158 AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEM---------------------LIGQSPFHGQDEEELFH-S-  214 (320)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH---------------------HHSSCSSCCSSHHHHHH-H-
T ss_pred             ccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHH---------------------HhCCCCCCCCCHHHHHH-H-
Confidence            334456899999998544433222 22455544444444                     44443332211111000 0 


Q ss_pred             hhccccccCcCCcccc-------ccccccCCCCchHHH-HhhcCcce
Q 019481          240 STITFLSALKITGCKS-------EEGYKNNSSLNPICQ-IVNQHPFY  278 (340)
Q Consensus       240 ~~~~~~~~~~~p~~~~-------~~~l~~dP~~R~t~~-~ll~hp~~  278 (340)
                        + ....+..|..++       ..||++||++|||++ ++++|||+
T Consensus       215 --i-~~~~~~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff  258 (320)
T d1xjda_         215 --I-RMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLF  258 (320)
T ss_dssp             --H-HHCCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGG
T ss_pred             --H-HcCCCCCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCchh
Confidence              0 012233344333       368999999999986 89999999

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-46  Score=327.78  Aligned_cols=184  Identities=20%  Similarity=0.127  Sum_probs=144.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCch----hhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPL----QLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~----~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|+||+||+|+++.+++.||+|+++.....    ...+.+.+|+++|++++|||||+++++|.+       .++.+++||
T Consensus         8 ~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~-------~~~~~ivmE   80 (299)
T d1ua2a_           8 EGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH-------KSNISLVFD   80 (299)
T ss_dssp             EETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC-------TTCCEEEEE
T ss_pred             cCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeecc-------CCceeehhh
Confidence            589999999999999999999999753221    123568899999999999999999997763       346789999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      |+.++++..+......     +++..++.+++||++||+|||+  ++|+||||||+|||++.++.+||+|||+|+.....
T Consensus        81 ~~~~~~~~~~~~~~~~-----l~~~~~~~~~~qil~aL~~lH~--~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~  153 (299)
T d1ua2a_          81 FMETDLEVIIKDNSLV-----LTPSHIKAYMLMTLQGLEYLHQ--HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP  153 (299)
T ss_dssp             CCSEEHHHHHTTCCSS-----CCSSHHHHHHHHHHHHHHHHHH--TTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred             hhcchHHhhhhhcccC-----CCHHHHHHHHHHHHHHHHHhhc--cceecccCCcceEEecCCCccccccCccccccCCC
Confidence            9998877777665554     9999999999999999999999  88999999999999999999999999999876553


Q ss_pred             C-CcceeeccceeeccCccccchh--hhhHhHhCCcccccccccc
Q 019481          161 N-ADLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       161 ~-~~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~~  202 (340)
                      . ...+.+||+.|+|||.+.....  ...|+||.|...+.+.++.
T Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~  198 (299)
T d1ua2a_         154 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRV  198 (299)
T ss_dssp             CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             cccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCc
Confidence            3 3445689999999965432211  1346666666666655443

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-45  Score=317.84  Aligned_cols=158  Identities=15%  Similarity=0.164  Sum_probs=133.5

Q ss_pred             CCcceEEEEEEcCC--CCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPD--DRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~--~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||+||+|+++.  ++..||+|+++........+.+.+|+++|++++|||||++++++.++        ..+++||||
T Consensus        19 ~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~--------~~~lvmE~~   90 (285)
T d1u59a_          19 CGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE--------ALMLVMEMA   90 (285)
T ss_dssp             CCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESS--------SEEEEEECC
T ss_pred             cccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccC--------eEEEEEEeC
Confidence            69999999998754  45579999998765566678899999999999999999999976432        467999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~  162 (340)
                      ++|+|.+++.....    .+++..+..++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+|+.+.....
T Consensus        91 ~~g~L~~~l~~~~~----~l~~~~~~~i~~qi~~gL~ylH~--~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~  164 (285)
T d1u59a_          91 GGGPLHKFLVGKRE----EIPVSNVAELLHQVSMGMKYLEE--KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS  164 (285)
T ss_dssp             TTEEHHHHHTTCTT----TSCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred             CCCcHHHHhhcccc----CCCHHHHHHHHHHHHHHHHHHHh--CCeecCcCchhheeeccCCceeeccchhhhccccccc
Confidence            99999999876543    39999999999999999999999  8899999999999999999999999999998765332


Q ss_pred             ----cceeeccceeeccC
Q 019481          163 ----DLTALDTSSVSAQS  176 (340)
Q Consensus       163 ----~~~~~gt~~~~~p~  176 (340)
                          ....+||+.|+||+
T Consensus       165 ~~~~~~~~~gt~~y~aPE  182 (285)
T d1u59a_         165 YYTARSAGKWPLKWYAPE  182 (285)
T ss_dssp             EECCCCSSCCCGGGCCHH
T ss_pred             ccccccccccCccccChH
Confidence                22345777788774

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-45  Score=317.91  Aligned_cols=234  Identities=12%  Similarity=0.085  Sum_probs=163.8

Q ss_pred             CCcceEEEEEEcC--CCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFP--DDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~--~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||+||+|.+.  .+++.||+|+++.. .+....+.+.+|+++|++++|||||++++++..+        ..+++|||
T Consensus        17 ~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~--------~~~lvmE~   88 (277)
T d1xbba_          17 SGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE--------SWMLVMEM   88 (277)
T ss_dssp             ECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS--------SEEEEEEC
T ss_pred             cCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC--------CEEEEEEc
Confidence            5899999999864  45678999999753 2234457799999999999999999999976422        34689999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      |++|+|.++++....     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+|+.+....
T Consensus        89 ~~~g~L~~~l~~~~~-----l~~~~~~~i~~qi~~gl~ylH~--~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~  161 (277)
T d1xbba_          89 AELGPLNKYLQQNRH-----VKDKNIIELVHQVSMGMKYLEE--SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE  161 (277)
T ss_dssp             CTTEEHHHHHHHCTT-----CCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred             CCCCcHHHHHhhccC-----CCHHHHHHHHHHHHHHHhhHHh--CCcccCCCcchhhcccccCcccccchhhhhhccccc
Confidence            999999999988766     9999999999999999999999  889999999999999999999999999999875543


Q ss_pred             Cc----ceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccC-CchhHHHHHHHHHH
Q 019481          162 AD----LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKT-ENETWNNFLYLLLI  235 (340)
Q Consensus       162 ~~----~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~  235 (340)
                      ..    ....||+.|+|||.+.+..+. ..|+||.|...+                     ++.+ |..||........ 
T Consensus       162 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~---------------------ellt~g~~Pf~~~~~~~~-  219 (277)
T d1xbba_         162 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW---------------------EAFSYGQKPYRGMKGSEV-  219 (277)
T ss_dssp             SEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHH---------------------HHHTTTCCSSTTCCHHHH-
T ss_pred             cccccccccCCCceecCchhhcCCCCCchhhhccchhhhh---------------------HHhhCCCCCCCCCCHHHH-
Confidence            22    234577888888533221111 224444444333                     3332 3333332111100 


Q ss_pred             HHhhhhccccccCcCCccc-------cccccccCCCCchHHHHh---hcCcce
Q 019481          236 ATLLSTITFLSALKITGCK-------SEEGYKNNSSLNPICQIV---NQHPFY  278 (340)
Q Consensus       236 ~~~~~~~~~~~~~~~p~~~-------~~~~l~~dP~~R~t~~~l---l~hp~~  278 (340)
                         ...+..+..+..|..+       -..||+.||++|||++++   |+|+|.
T Consensus       220 ---~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~  269 (277)
T d1xbba_         220 ---TAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  269 (277)
T ss_dssp             ---HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             ---HHHHHcCCCCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHh
Confidence               0111112233333333       337899999999998877   466654

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=7e-45  Score=317.88  Aligned_cols=159  Identities=16%  Similarity=0.130  Sum_probs=135.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||+||+|+++.+++.||+|+++..  ....+++.+|+++|++++|||||+++++|.       +....+++||||++
T Consensus        27 ~G~fg~Vy~a~~~~~~~~vAvK~i~~~--~~~~~~~~~E~~il~~l~HpnIv~~~~~~~-------~~~~~~iv~E~~~~   97 (287)
T d1opja_          27 GGQYGEVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT-------REPPFYIITEFMTY   97 (287)
T ss_dssp             TTTTSSEEEEEEGGGTEEEEEEECCTT--CSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-------SSSSCEEEEECCTT
T ss_pred             eCCCeEEEEEEECCCCeEEEEEEECCc--cchHHHHHHHHHHHHhCCCCCEecCCccEe-------eCCeeEEEeecccC
Confidence            699999999999999999999998743  234567999999999999999999999765       33467799999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc-
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD-  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~-  163 (340)
                      |+|.+++.....   ..+++..++.++.||++||+|||+  ++|+||||||+|||+++++++||+|||+|+....+... 
T Consensus        98 g~l~~~l~~~~~---~~~~~~~~~~i~~qi~~gL~yLH~--~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~  172 (287)
T d1opja_          98 GNLLDYLRECNR---QEVSAVVLLYMATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA  172 (287)
T ss_dssp             CBHHHHHHHSCT---TTSCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEE
T ss_pred             cchHHHhhhccc---cchHHHHHHHHHHHHHHHHHHHHH--CCcccCccccCeEEECCCCcEEEccccceeecCCCCcee
Confidence            999999976543   459999999999999999999999  88999999999999999999999999999876554322 


Q ss_pred             -ceeeccceeeccCc
Q 019481          164 -LTALDTSSVSAQSG  177 (340)
Q Consensus       164 -~~~~gt~~~~~p~~  177 (340)
                       ....||+.|+||+.
T Consensus       173 ~~~~~g~~~y~aPE~  187 (287)
T d1opja_         173 HAGAKFPIKWTAPES  187 (287)
T ss_dssp             ETTEEECGGGCCHHH
T ss_pred             eccccccccccChHH
Confidence             22347777888853

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.9e-45  Score=315.06  Aligned_cols=156  Identities=17%  Similarity=0.195  Sum_probs=131.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||+||+|+++ +++.||+|+++..  ....+.+.+|+++|++++|||||++++++..        +..+++|||+++
T Consensus        23 ~G~fg~Vy~~~~~-~~~~vAvK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~--------~~~~iv~Ey~~~   91 (272)
T d1qpca_          23 AGQFGEVWMGYYN-GHTKVAVKSLKQG--SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ--------EPIYIITEYMEN   91 (272)
T ss_dssp             EETTEEEEEEEET-TTEEEEEEEECTT--SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS--------SSCEEEEECCTT
T ss_pred             cCCCcEEEEEEEC-CCCEEEEEEEccC--cCCHHHHHHHHHHHHhCCCCCEeEEEeeecc--------CCeEEEEEeCCC
Confidence            5899999999985 5678999999742  2345679999999999999999999996532        246799999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC--C
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN--A  162 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--~  162 (340)
                      |+|.+++.....   ..+++..+..++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+|+.+....  .
T Consensus        92 g~L~~~~~~~~~---~~l~~~~~~~i~~qi~~gl~~lH~--~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~  166 (272)
T d1qpca_          92 GSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA  166 (272)
T ss_dssp             CBHHHHTTSHHH---HTCCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEEC
T ss_pred             CcHHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCccchhheeeecccceeeccccceEEccCCcccc
Confidence            999998876553   459999999999999999999999  889999999999999999999999999999876533  2


Q ss_pred             cceeeccceeeccC
Q 019481          163 DLTALDTSSVSAQS  176 (340)
Q Consensus       163 ~~~~~gt~~~~~p~  176 (340)
                      .....||+.|+||+
T Consensus       167 ~~~~~gt~~y~APE  180 (272)
T d1qpca_         167 REGAKFPIKWTAPE  180 (272)
T ss_dssp             CTTCCCCTTTSCHH
T ss_pred             ccccCCcccccChH
Confidence            23456788888885

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-45  Score=319.40  Aligned_cols=233  Identities=16%  Similarity=0.111  Sum_probs=161.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||+||+|+..   ..||+|+++.. ......+.+.+|+++|++++|||||+++++..        ....+++||||+
T Consensus        18 ~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~--------~~~~~lv~Ey~~   86 (276)
T d1uwha_          18 SGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST--------APQLAIVTQWCE   86 (276)
T ss_dssp             ECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC--------SSSCEEEEECCC
T ss_pred             eCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe--------ccEEEEEEecCC
Confidence            5999999999864   35999999753 33455678999999999999999999999542        235679999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC--
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN--  161 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--  161 (340)
                      +|+|.+++.....    .+++..+..++.||++||+|||+  ++|+||||||+|||++.++++||+|||+|+......  
T Consensus        87 ~g~L~~~l~~~~~----~~~~~~~~~i~~qi~~gl~yLH~--~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~  160 (276)
T d1uwha_          87 GSSLYHHLHIIET----KFEMIKLIDIARQTAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS  160 (276)
T ss_dssp             EEEHHHHHHTSCC----CCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEEETTSSEEECCCCCSCC-------
T ss_pred             CCCHHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHhc--CCEeccccCHHHEEEcCCCCEEEccccceeeccccCCc
Confidence            9999999976543    39999999999999999999999  889999999999999999999999999998765432  


Q ss_pred             -CcceeeccceeeccCccccch----hhhhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHHHHH
Q 019481          162 -ADLTALDTSSVSAQSGKTGME----MKMAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIA  236 (340)
Q Consensus       162 -~~~~~~gt~~~~~p~~~~~~~----~~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (340)
                       ...+..||+.|+|||.+.+..    -...|+||.|...+++.                     +|..||..........
T Consensus       161 ~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~---------------------tg~~Pf~~~~~~~~~~  219 (276)
T d1uwha_         161 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM---------------------TGQLPYSNINNRDQII  219 (276)
T ss_dssp             -----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHH---------------------HSSCTTTTCCCHHHHH
T ss_pred             ccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHH---------------------HCCCCCCCCChHHHHH
Confidence             234567899999995443211    11235555554444443                     3333333211110000


Q ss_pred             Hhhhh-ccccccCcCCcc-------ccccccccCCCCchHHHHhhcC
Q 019481          237 TLLST-ITFLSALKITGC-------KSEEGYKNNSSLNPICQIVNQH  275 (340)
Q Consensus       237 ~~~~~-~~~~~~~~~p~~-------~~~~~l~~dP~~R~t~~~ll~h  275 (340)
                      ..... ......+.++..       +-..||+.||++|||+++++++
T Consensus       220 ~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         220 FMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             HHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            01000 000011122222       2347899999999999999876

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-44  Score=316.78  Aligned_cols=185  Identities=19%  Similarity=0.145  Sum_probs=144.3

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc-hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP-LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||+||+|++..+++.||+|+++.... ....+.+.+|+++|++++|||||+++++|.+       ...+|++|||+.
T Consensus        12 ~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~-------~~~~~iv~e~~~   84 (298)
T d1gz8a_          12 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-------ENKLYLVFEFLH   84 (298)
T ss_dssp             ECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE-------TTEEEEEEECCS
T ss_pred             cCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEecccccc-------ccceeEEEeecC
Confidence            58999999999999999999999975322 2345778999999999999999999998864       347889999997


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-CC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-NA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~~  162 (340)
                      + ++.+++.....   ..+++..++.++.||+.||+|||+  ++|+||||||+|||++.++++||+|||+|+..... ..
T Consensus        85 ~-~~~~~~~~~~~---~~l~e~~~~~~~~qil~~L~yLH~--~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~  158 (298)
T d1gz8a_          85 Q-DLKKFMDASAL---TGIPLPLIKSYLFQLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT  158 (298)
T ss_dssp             E-EHHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred             C-chhhhhhhhcc---cCCCHHHHHHHHHHHHHHHHHhhc--CCEEccccCchheeecccCcceeccCCcceeccCCccc
Confidence            5 55555443322   349999999999999999999999  88999999999999999999999999999876543 34


Q ss_pred             cceeeccceeeccCccccchhh--hhHhHhCCcccccccccc
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK--MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~--~~~~~s~g~~~~~~~~~~  202 (340)
                      .....||+.|+||+.....+..  ..|+||.|...+.+.++.
T Consensus       159 ~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~  200 (298)
T d1gz8a_         159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR  200 (298)
T ss_dssp             TTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             ceeecccceeeehhhhccccCCCccccccccchhhhHHhhCC
Confidence            4566899999999744333321  346666666665555444

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-44  Score=309.90  Aligned_cols=156  Identities=17%  Similarity=0.151  Sum_probs=123.4

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||+||+|++. +++.||+|+++..  ....+++.+|++++++++|||||++++++..       ....+++|||+++
T Consensus        15 ~G~fg~Vy~~~~~-~~~~vAvK~i~~~--~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-------~~~~~lv~E~~~~   84 (263)
T d1sm2a_          15 SGQFGLVHLGYWL-NKDKVAIKTIREG--AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-------QAPICLVFEFMEH   84 (263)
T ss_dssp             CCSSCCEEEEEET-TTEEEEEEECCSS--SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-------SSSCEEEEECCTT
T ss_pred             eCCCeEEEEEEEC-CCCEEEEEEECCC--cCcHHHHHHHHHHHHhcCCCCcccccceecc-------CCceEEEEEecCC
Confidence            6999999999986 4567999999742  2345679999999999999999999997653       3467799999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc-
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD-  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~-  163 (340)
                      |+|.+++.....    .+++..+..++.||++||+|||+  ++|+||||||+|||+|+++++||+|||+|+........ 
T Consensus        85 g~L~~~l~~~~~----~~~~~~~~~i~~qia~gl~~lH~--~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~  158 (263)
T d1sm2a_          85 GCLSDYLRTQRG----LFAAETLLGMCLDVCEGMAYLEE--ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS  158 (263)
T ss_dssp             CBHHHHHHTTTT----CCCHHHHHHHHHHHHHHHHHHHH--TTCCCTTCSGGGEEECGGGCEEECSCC------------
T ss_pred             CcHHHHhhcccc----CCCHHHHHHHHHHHHHHHHhhhc--cceeecccchhheeecCCCCeEecccchheeccCCCcee
Confidence            999999887654    38999999999999999999999  88999999999999999999999999999877554322 


Q ss_pred             -ceeeccceeeccC
Q 019481          164 -LTALDTSSVSAQS  176 (340)
Q Consensus       164 -~~~~gt~~~~~p~  176 (340)
                       ....||+.|+|||
T Consensus       159 ~~~~~gt~~y~aPE  172 (263)
T d1sm2a_         159 STGTKFPVKWASPE  172 (263)
T ss_dssp             ------CTTSCCHH
T ss_pred             ecceecCcccCChH
Confidence             2356788888885

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-45  Score=318.60  Aligned_cols=232  Identities=13%  Similarity=0.024  Sum_probs=172.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc-----hhhHHHHHHHHHHhhhcC--CCccccccccccccccccCCcceeee
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP-----LQLRRDDDGKLDSLEEIF--HPNQVKPSGYWSMNICLTGDRRYCWK   77 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-----~~~~~~~~~E~~~l~~l~--hpnIv~l~~~f~~~~~~~~~~~~~~~   77 (340)
                      .|+||+||+|++..+++.||+|++++...     .....++.+|+++|++++  |||||+++++|.       +.+..++
T Consensus        14 ~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~-------~~~~~~l   86 (273)
T d1xwsa_          14 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE-------RPDSFVL   86 (273)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE-------CSSEEEE
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEe-------eCCeEEE
Confidence            58999999999999999999999975211     112344678999999997  899999999776       3447789


Q ss_pred             eeccccC-CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC-CCceEEeccccce
Q 019481           78 NKWLMQK-KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE-TFKCNLSDFSTAK  155 (340)
Q Consensus        78 ~~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~-~~~~kl~DFGla~  155 (340)
                      +|||+.+ +++.+++.....     +++.+++.++.||++||+|||+  ++|+||||||+|||++. ++.+||+|||+|+
T Consensus        87 v~e~~~~~~~l~~~~~~~~~-----l~e~~~~~~~~qi~~al~~lH~--~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~  159 (273)
T d1xwsa_          87 ILERPEPVQDLFDFITERGA-----LQEELARSFFWQVLEAVRHCHN--CGVLHRDIKDENILIDLNRGELKLIDFGSGA  159 (273)
T ss_dssp             EEECCSSEEEHHHHHHHHCS-----CCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             EEEeccCcchHHHHHhccCC-----CCHHHHHHHHHHHHHHHHHHHH--CCCccccCcccceEEecCCCeEEECccccce
Confidence            9999975 688888887766     9999999999999999999999  88999999999999986 4799999999998


Q ss_pred             eecccCCcceeeccceeeccCccccchhh--hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHHH
Q 019481          156 VSAVENADLTALDTSSVSAQSGKTGMEMK--MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYLL  233 (340)
Q Consensus       156 ~~~~~~~~~~~~gt~~~~~p~~~~~~~~~--~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (340)
                      .... ....+.+||+.|+|||.+.+.++.  ..|+|+.|...+.+.++.                     .||...... 
T Consensus       160 ~~~~-~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~---------------------~Pf~~~~~i-  216 (273)
T d1xwsa_         160 LLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD---------------------IPFEHDEEI-  216 (273)
T ss_dssp             ECCS-SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSS---------------------CSCCSHHHH-
T ss_pred             eccc-ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCC---------------------CCCCCchHH-
Confidence            7644 334567899999999655433221  235666555555544433                     333322211 


Q ss_pred             HHHHhhhhccccccCcCCc---cccccccccCCCCchHHHHhhcCccee
Q 019481          234 LIATLLSTITFLSALKITG---CKSEEGYKNNSSLNPICQIVNQHPFYI  279 (340)
Q Consensus       234 ~~~~~~~~~~~~~~~~~p~---~~~~~~l~~dP~~R~t~~~ll~hp~~~  279 (340)
                          .....  .-.+.++.   ++...||+.||++|||++++++|||+.
T Consensus       217 ----~~~~~--~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~  259 (273)
T d1xwsa_         217 ----IRGQV--FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ  259 (273)
T ss_dssp             ----HHCCC--CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred             ----hhccc--CCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhC
Confidence                00001  11112221   234467999999999999999999993

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-43  Score=315.98  Aligned_cols=163  Identities=16%  Similarity=0.097  Sum_probs=131.4

Q ss_pred             CCcceEEEEEEcCCCCc-----eEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeee
Q 019481            5 APSFSVLIHVPFPDDRD-----DVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~-----~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      .|+||+||+|++..+++     .||+|.+...........+.+|+.+|+++ +|||||+++++|.       +.+..+++
T Consensus        47 ~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~-------~~~~~~lv  119 (325)
T d1rjba_          47 SGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT-------LSGPIYLI  119 (325)
T ss_dssp             ECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC-------SSSSCEEE
T ss_pred             eCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEe-------eCCeEEEE
Confidence            58999999999866543     69999987655555567789999999998 8999999999765       34467899


Q ss_pred             eccccCCCHHHHhcccCCC------------------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEe
Q 019481           79 KWLMQKKGLENVHIGEHPA------------------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILL  140 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~------------------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl  140 (340)
                      ||||++|+|.++++.....                  ....+++..++.++.||++||+|||+  ++|+||||||+|||+
T Consensus       120 ~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~--~~IiHRDlKp~Nill  197 (325)
T d1rjba_         120 FEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF--KSCVHRDLAARNVLV  197 (325)
T ss_dssp             EECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH--TTEEETTCSGGGEEE
T ss_pred             EEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh--CCeeeccCchhcccc
Confidence            9999999999999865421                  11348999999999999999999999  889999999999999


Q ss_pred             cCCCceEEeccccceeecccCCc---ceeeccceeeccC
Q 019481          141 DETFKCNLSDFSTAKVSAVENAD---LTALDTSSVSAQS  176 (340)
Q Consensus       141 ~~~~~~kl~DFGla~~~~~~~~~---~~~~gt~~~~~p~  176 (340)
                      +.++++||+|||+|+........   .+..||+.|+||+
T Consensus       198 ~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE  236 (325)
T d1rjba_         198 THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPE  236 (325)
T ss_dssp             ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHH
T ss_pred             ccCCeEEEeeccccccccCCCceeeeccccCCCccCChH
Confidence            99999999999999877654432   2456788888885

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-44  Score=316.83  Aligned_cols=189  Identities=17%  Similarity=0.120  Sum_probs=144.8

Q ss_pred             CCcceEEEEEEcCCC-CceEEEEEeeccCc-hhhHHHHHHHHHHhhhc---CCCccccccccccccccccCCcceeeeee
Q 019481            5 APSFSVLIHVPFPDD-RDDVMLKLHELITP-LQLRRDDDGKLDSLEEI---FHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~-~~~vAiK~~~~~~~-~~~~~~~~~E~~~l~~l---~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      +|+||+||+|++..+ ++.||+|+++.... ......+.+|+++|+.+   +||||++++++|....  .....+.++++
T Consensus        17 ~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~--~~~~~~~~~~~   94 (305)
T d1blxa_          17 EGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR--TDRETKLTLVF   94 (305)
T ss_dssp             EETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE--CSSEEEEEEEE
T ss_pred             cccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccc--cccCceEEEEE
Confidence            589999999999655 67899999975322 22334567888887776   7999999999886431  23445788999


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      |++.+|++.........    .+++..++.++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+++....
T Consensus        95 e~~~~~~~~~~~~~~~~----~~~~~~~~~~~~qi~~aL~yLH~--~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~  168 (305)
T d1blxa_          95 EHVDQDLTTYLDKVPEP----GVPTETIKDMMFQLLRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF  168 (305)
T ss_dssp             ECCSCBHHHHHHHSCTT----CSCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCG
T ss_pred             EeccCCchhhhhhccCC----CCCHHHHHHHHHHHHHHHHHHHh--CCEEecCCCccEEEEcCCCCeeecchhhhhhhcc
Confidence            99988777655544433    49999999999999999999999  8899999999999999999999999999998777


Q ss_pred             cCCcceeeccceeeccCccccchhh-hhHhHhCCccccccccc
Q 019481          160 ENADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEK  201 (340)
Q Consensus       160 ~~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~  201 (340)
                      .....+.+||+.|+|||.+.+..+- ..|+||.|...+.+.++
T Consensus       169 ~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g  211 (305)
T d1blxa_         169 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR  211 (305)
T ss_dssp             GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             cccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHC
Confidence            7767788999999999654433322 23555555555444433

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-43  Score=317.25  Aligned_cols=187  Identities=14%  Similarity=0.111  Sum_probs=147.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||+||+|++..+++.||+|++++.......+.+.+|+++|++++||||+++++++.....  ....++++++ ++.+
T Consensus        18 ~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~--~~~~~~~l~~-~~~~   94 (345)
T d1pmea_          18 EGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTI--EQMKDVYLVT-HLMG   94 (345)
T ss_dssp             ---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSST--TTCCCEEEEE-ECCC
T ss_pred             eccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccc--cccceEEEEE-eecC
Confidence            699999999999999999999999865555666788999999999999999999998765432  2223445554 5568


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCC--
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENA--  162 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~--  162 (340)
                      |+|.+++... .     +++..++.++.||++||+|||+  ++|+||||||+|||++.++.+||+|||+|+.......  
T Consensus        95 g~L~~~l~~~-~-----l~~~~i~~i~~qil~al~yLH~--~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~  166 (345)
T d1pmea_          95 ADLYKLLKTQ-H-----LSNDHICYFLYQILRGLKYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT  166 (345)
T ss_dssp             EEHHHHHHHC-C-----CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBC
T ss_pred             CchhhhhhcC-C-----CCHHHHHHHHHHHHHHHHHHHH--CCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCccc
Confidence            9999999754 2     9999999999999999999999  8899999999999999999999999999987655332  


Q ss_pred             --cceeeccceeeccCccccchh--hhhHhHhCCcccccccccc
Q 019481          163 --DLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 --~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~~  202 (340)
                        ....+||+.|+||+.......  ...|+|+.|...+.+.++.
T Consensus       167 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~  210 (345)
T d1pmea_         167 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR  210 (345)
T ss_dssp             CTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSS
T ss_pred             eeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCC
Confidence              345678999999975433222  1347777777776665554

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.4e-43  Score=304.38  Aligned_cols=160  Identities=16%  Similarity=0.177  Sum_probs=127.8

Q ss_pred             CCcceEEEEEEcCCCC----ceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVPFPDDR----DDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~----~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|+||+||+|+++.++    ..||+|+++..........+.+|+++|++++|||||++++++.       +....++++|
T Consensus        17 ~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~-------~~~~~~~v~e   89 (283)
T d1mqba_          17 AGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS-------KYKPMMIITE   89 (283)
T ss_dssp             ECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-------SSSSEEEEEE
T ss_pred             eCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEe-------cCCceEEEEE
Confidence            5899999999987654    4699999976555566677999999999999999999999764       3346779999


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      ||.+|++.+.+.....    .+++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+|+.+...
T Consensus        90 ~~~~~~l~~~~~~~~~----~~~~~~~~~i~~~i~~gl~~lH~--~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~  163 (283)
T d1mqba_          90 YMENGALDKFLREKDG----EFSVLQLVGMLRGIAAGMKYLAN--MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD  163 (283)
T ss_dssp             CCTTEEHHHHHHHTTT----CSCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred             ecccCcchhhhhcccc----cccHHHHHHHHHHHHHhhhhccc--cccccCccccceEEECCCCeEEEcccchhhcccCC
Confidence            9999999998876654    39999999999999999999999  78999999999999999999999999999877553


Q ss_pred             CC----cceeeccceeeccCc
Q 019481          161 NA----DLTALDTSSVSAQSG  177 (340)
Q Consensus       161 ~~----~~~~~gt~~~~~p~~  177 (340)
                      ..    .....||+.|+|||.
T Consensus       164 ~~~~~~~~~~~gt~~Y~APE~  184 (283)
T d1mqba_         164 PEATYTTSGGKIPIRWTAPEA  184 (283)
T ss_dssp             ----------CCCGGGSCHHH
T ss_pred             CccceEeccCCCCccccCHHH
Confidence            22    123457888888853

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-43  Score=318.34  Aligned_cols=188  Identities=18%  Similarity=0.121  Sum_probs=145.6

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||+||+|++..+++.||+|+++...     ....+|+++|++++||||++++++|..... ..+..+.+++||||++
T Consensus        30 ~G~fg~Vy~a~~~~~~~~vAiK~i~~~~-----~~~~~Ei~il~~l~h~niv~~~~~~~~~~~-~~~~~~~~lv~Ey~~~  103 (350)
T d1q5ka_          30 NGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFFYSSGE-KKDEVYLNLVLDYVPE  103 (350)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEECCS-----SSCCHHHHHHHHCCCTTBCCEEEEEEEC---CCSCCEEEEEEECCSE
T ss_pred             eCcCeEEEEEEECCCCCEEEEEEECccc-----hHHHHHHHHHHhcCCCCCCcEEEEEEecCc-cCCceEEEEEEeccCC
Confidence            5899999999999999999999997532     123579999999999999999998864322 2355678899999986


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC-ceEEeccccceeecccCCc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF-KCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~-~~kl~DFGla~~~~~~~~~  163 (340)
                      |.+..+......  ...+++..++.+++||++||+|||+  ++|+||||||+|||++.++ .+||+|||+|+........
T Consensus       104 ~~~~~l~~~~~~--~~~l~~~~~~~i~~qil~aL~yLH~--~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~~  179 (350)
T d1q5ka_         104 TVYRVARHYSRA--KQTLPVIYVKLYMYQLFRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN  179 (350)
T ss_dssp             EHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHT--TTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSCC
T ss_pred             ccHHHHHhhhhc--cCCCCHHHHHHHHHHHHHHHHHHHh--cCCcccCCCcceEEEecCCCceeEecccchhhccCCccc
Confidence            543333321111  1349999999999999999999999  8899999999999999875 8999999999988877777


Q ss_pred             ceeeccceeeccCccccc-hhh-hhHhHhCCcccccccccc
Q 019481          164 LTALDTSSVSAQSGKTGM-EMK-MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~-~~~-~~~~~s~g~~~~~~~~~~  202 (340)
                      .+.+||+.|+||+.+.+. .+- ..|+|+.|+..+++.++.
T Consensus       180 ~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~  220 (350)
T d1q5ka_         180 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ  220 (350)
T ss_dssp             CSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTS
T ss_pred             ccccccccccChHHhhcccCCCcceeecccceEEEehhhCC
Confidence            788999999999654432 111 236666666666555544

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-43  Score=301.44  Aligned_cols=230  Identities=15%  Similarity=0.121  Sum_probs=166.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      +|+||+||+|+++ +++.||+|.+++..  ...+++.+|++++++++||||+++++++.       +.+..+++|||+++
T Consensus        14 ~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~-------~~~~~~iv~Ey~~~   83 (258)
T d1k2pa_          14 TGQFGVVKYGKWR-GQYDVAIKMIKEGS--MSEDEFIEEAKVMMNLSHEKLVQLYGVCT-------KQRPIFIITEYMAN   83 (258)
T ss_dssp             EETTEEEEEEEET-TTEEEEEEEEESSS--SCHHHHHHHHHHHHTCCCTTBCCEEEEEC-------CSSSEEEEEECCTT
T ss_pred             cCCCeEEEEEEEC-CCCEEEEEEECcCc--CCHHHHHHHHHHHHhcCCCceeeEEEEEe-------eCCceEEEEEccCC
Confidence            6999999999984 67789999997532  33467999999999999999999999765       34467899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc-
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD-  163 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~-  163 (340)
                      |+|.+++.....    .+++..+..++.||++||+|||+  ++|+||||||+|||+++++.+||+|||+|+.+...... 
T Consensus        84 g~l~~~~~~~~~----~~~~~~~~~i~~qi~~gl~~LH~--~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~  157 (258)
T d1k2pa_          84 GCLLNYLREMRH----RFQTQQLLEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS  157 (258)
T ss_dssp             EEHHHHHHSGGG----CCCHHHHHHHHHHHHHHHHHHHH--TTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCC
T ss_pred             CcHHHhhhcccc----CCcHHHHHHHHHHHHHHHHHHhh--cCcccccccceeEEEcCCCcEEECcchhheeccCCCcee
Confidence            999999877654    38999999999999999999999  88999999999999999999999999999876554332 


Q ss_pred             -ceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccC-CchhHHHHHHHHHHHHhhh
Q 019481          164 -LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKT-ENETWNNFLYLLLIATLLS  240 (340)
Q Consensus       164 -~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~  240 (340)
                       ....||..|+|||.....++. ..|+|+.|...+                     +|.+ |..||..........    
T Consensus       158 ~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~---------------------el~t~g~~Pf~~~~~~~~~~----  212 (258)
T d1k2pa_         158 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMW---------------------EIYSLGKMPYERFTNSETAE----  212 (258)
T ss_dssp             CCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHH---------------------HHHTTSCCTTTTSCHHHHHH----
T ss_pred             ecccCCCCCcCCcHHhcCCCCCcceeecccchhhH---------------------hHHhcCCCCCCCCCHHHHHH----
Confidence             234678888888533222211 224444444443                     3332 333333221111111    


Q ss_pred             hccccccCcCCcc-------ccccccccCCCCchHHHHhhcC
Q 019481          241 TITFLSALKITGC-------KSEEGYKNNSSLNPICQIVNQH  275 (340)
Q Consensus       241 ~~~~~~~~~~p~~-------~~~~~l~~dP~~R~t~~~ll~h  275 (340)
                      .+.....+.+|..       +-..||+.||++|||++++++|
T Consensus       213 ~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         213 HIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN  254 (258)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHhCCCCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            1111112222222       2347899999999999999886

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-43  Score=314.93  Aligned_cols=186  Identities=16%  Similarity=0.105  Sum_probs=146.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||+||+|+++.+++.||+|++++. ......+.+.+|+++|++++|||||+++++|....... +....+++|||+ 
T Consensus        28 ~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~-~~~~~~lv~e~~-  105 (346)
T d1cm8a_          28 SGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLD-DFTDFYLVMPFM-  105 (346)
T ss_dssp             -----CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTT-TCCCCEEEEECC-
T ss_pred             cCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcccc-ccceEEEEEecc-
Confidence            699999999999999999999999753 33445677899999999999999999999987654332 333567999999 


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +++|.++++.. .     +++..++.+++||+.||+|||+  ++|+||||||+|||++.++.+||+|||+|+....  ..
T Consensus       106 ~~~l~~~~~~~-~-----l~~~~~~~~~~qi~~aL~~LH~--~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~--~~  175 (346)
T d1cm8a_         106 GTDLGKLMKHE-K-----LGEDRIQFLVYQMLKGLRYIHA--AGIIHRDLKPGNLAVNEDCELKILDFGLARQADS--EM  175 (346)
T ss_dssp             SEEHHHHHHHC-C-----CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEECTTCCEEECCCTTCEECCS--SC
T ss_pred             cccHHHHHHhc-c-----ccHHHHHHHHHHHHHHHHHHHh--CCCcccccCcchhhcccccccccccccceeccCC--cc
Confidence            56888877643 3     9999999999999999999999  8899999999999999999999999999987654  33


Q ss_pred             ceeeccceeeccCccccchh--hhhHhHhCCcccccccccc
Q 019481          164 LTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~~  202 (340)
                      ....||+.|+||+.+.+...  ...|+|+.|...+.+.++.
T Consensus       176 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~  216 (346)
T d1cm8a_         176 TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK  216 (346)
T ss_dssp             CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             ccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCc
Confidence            45678999999976544322  2346777777666665554

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.8e-43  Score=303.21  Aligned_cols=232  Identities=15%  Similarity=0.085  Sum_probs=155.1

Q ss_pred             CCcceEEEEEEcCCCC---ceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDR---DDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~---~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||+||+|++..++   ..||+|.++........+.+.+|+++|++++|||||++++++..        +..+++|||
T Consensus        17 ~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~--------~~~~iv~E~   88 (273)
T d1mp8a_          17 EGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE--------NPVWIIMEL   88 (273)
T ss_dssp             ECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS--------SSCEEEEEC
T ss_pred             eCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec--------CeEEEEEEe
Confidence            5899999999986543   46889988765556667789999999999999999999997642        257799999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      +++|+|.+++.....    .+++..++.++.||++||+|||+  ++|+||||||+||+++.++.+||+|||+|+......
T Consensus        89 ~~~g~l~~~~~~~~~----~l~~~~~~~~~~qi~~gl~ylH~--~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~  162 (273)
T d1mp8a_          89 CTLGELRSFLQVRKY----SLDLASLILYAYQLSTALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST  162 (273)
T ss_dssp             CTTEEHHHHHHHTTT----TSCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred             ccCCcHHhhhhccCC----CCCHHHHHHHHHHHHHHhhhhcc--cCeeccccchhheeecCCCcEEEccchhheeccCCc
Confidence            999999998776553    39999999999999999999999  889999999999999999999999999998765433


Q ss_pred             C--cceeeccceeeccCccccchhh-hhHhHhCCcccccccc-ccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHH
Q 019481          162 A--DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAE-KAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIAT  237 (340)
Q Consensus       162 ~--~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (340)
                      .  .....||+.|+||+......+. ..|+||.|...+++.+ +.  .|+.......+                      
T Consensus       163 ~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~--~P~~~~~~~~~----------------------  218 (273)
T d1mp8a_         163 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV--KPFQGVKNNDV----------------------  218 (273)
T ss_dssp             --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSC--CTTTTCCGGGH----------------------
T ss_pred             ceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCC--CCCCCCCHHHH----------------------
Confidence            2  2344678888888533221111 2244544444443322 22  22222111111                      


Q ss_pred             hhhhccccccCcCCccc-------cccccccCCCCchHHHHhhcC
Q 019481          238 LLSTITFLSALKITGCK-------SEEGYKNNSSLNPICQIVNQH  275 (340)
Q Consensus       238 ~~~~~~~~~~~~~p~~~-------~~~~l~~dP~~R~t~~~ll~h  275 (340)
                       ...+..+..+.+|..+       -..||..||++|||++++++|
T Consensus       219 -~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         219 -IGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             -HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -HHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence             0011112222233322       337899999999999999875

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-43  Score=306.13  Aligned_cols=156  Identities=18%  Similarity=0.198  Sum_probs=126.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|+++++ +.||+|+++..  ....+.+.+|++++++++|||||++++++..        +.++++|||+++
T Consensus        27 ~G~fg~Vy~~~~~~~-~~vAiK~l~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~--------~~~~lv~Ey~~~   95 (285)
T d1fmka3          27 QGCFGEVWMGTWNGT-TRVAIKTLKPG--TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--------EPIYIVTEYMSK   95 (285)
T ss_dssp             ECSSCEEEEEEETTT-EEEEEEECCTT--SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS--------SSCEEEECCCTT
T ss_pred             eCCCeEEEEEEECCC-CEEEEEEECcc--cCCHHHHHHHHHHHHhcccCCEeEEEEEEec--------CCeEEEEEecCC
Confidence            589999999998766 56999999743  2345679999999999999999999996642        246799999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC--C
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN--A  162 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--~  162 (340)
                      |+|.+++.....   ..+++..++.++.||+.||+|||+  ++|+||||||+|||+|.++++||+|||+|+......  .
T Consensus        96 g~l~~~~~~~~~---~~l~~~~~~~i~~~i~~gl~~LH~--~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~  170 (285)
T d1fmka3          96 GSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVER--MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA  170 (285)
T ss_dssp             CBHHHHHSHHHH---TTCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred             Cchhhhhhhccc---ccchHHHHHHHHHHHHHHHHHHhh--hheecccccceEEEECCCCcEEEcccchhhhccCCCcee
Confidence            999999886542   349999999999999999999999  889999999999999999999999999998765433  2


Q ss_pred             cceeeccceeeccC
Q 019481          163 DLTALDTSSVSAQS  176 (340)
Q Consensus       163 ~~~~~gt~~~~~p~  176 (340)
                      .....||+.|+||+
T Consensus       171 ~~~~~gt~~y~aPE  184 (285)
T d1fmka3         171 RQGAKFPIKWTAPE  184 (285)
T ss_dssp             -----CCGGGSCHH
T ss_pred             eccccccccccChH
Confidence            23356888899885

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3.6e-43  Score=307.52  Aligned_cols=181  Identities=15%  Similarity=0.137  Sum_probs=139.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc-hhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP-LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||+||+|+++ +++.||+|+++.... ....+.+.+|+.+|++++|||||+++++|..       .+..++++|++.
T Consensus        12 ~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-------~~~~~i~~e~~~   83 (286)
T d1ob3a_          12 EGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-------KKRLVLVFEHLD   83 (286)
T ss_dssp             EETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC-------SSCEEEEEECCS
T ss_pred             cCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeeccc-------CCceeEEEEeeh
Confidence            5889999999985 678999999976432 3335778999999999999999999998764       336678999998


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc-CC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE-NA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-~~  162 (340)
                      ++.+..+....+.     +++..++.++.||+.||+|||+  .+|+||||||+|||++.++.+||+|||+|...... ..
T Consensus        84 ~~~~~~~~~~~~~-----l~~~~~~~i~~qi~~~L~~LH~--~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~  156 (286)
T d1ob3a_          84 QDLKKLLDVCEGG-----LESVTAKSFLLQLLNGIAYCHD--RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK  156 (286)
T ss_dssp             EEHHHHHHTSTTC-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred             hhhHHHHHhhcCC-----cchhhhHHHHHHHHHHHHHhcc--CcEEecCCCCceeeEcCCCCEEecccccceecccCccc
Confidence            8777777666655     9999999999999999999999  77999999999999999999999999999876543 22


Q ss_pred             cceeeccceeeccCccccchhh--hhHhHhCCcccccccc
Q 019481          163 DLTALDTSSVSAQSGKTGMEMK--MAQLESGGWRAHDEAE  200 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~~--~~~~~s~g~~~~~~~~  200 (340)
                      .....|++.|++|+.+.+....  ..|+|+.|...+++.+
T Consensus       157 ~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~  196 (286)
T d1ob3a_         157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN  196 (286)
T ss_dssp             -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHH
T ss_pred             cceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHH
Confidence            3445688888888644332221  2355555555544443

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=5.4e-44  Score=311.26  Aligned_cols=188  Identities=16%  Similarity=0.144  Sum_probs=145.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc--CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI--TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~   82 (340)
                      .|+||.||+|++..+++.||+|++++.  .+....+.+.+|++++++++|||||++++++....   ......|++|||+
T Consensus        17 ~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~---~~~~~~~lvmE~~   93 (277)
T d1o6ya_          17 FGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET---PAGPLPYIVMEYV   93 (277)
T ss_dssp             ECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEC---SSSEEEEEEEECC
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeecc---CCCceEEEEEECC
Confidence            599999999999999999999999753  23445567999999999999999999999886432   1233578999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC-
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN-  161 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-  161 (340)
                      +||+|.+++...+.     +++.+++.++.||++||+|||+  ++|+||||||+|||++.++..+|+|||.++...... 
T Consensus        94 ~g~~L~~~~~~~~~-----l~~~~~~~i~~qi~~al~~lH~--~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~  166 (277)
T d1o6ya_          94 DGVTLRDIVHTEGP-----MTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN  166 (277)
T ss_dssp             CEEEHHHHHHHHCS-----CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEEETTSCEEECCCTTCEECC----
T ss_pred             CCCEehhhhcccCC-----CCHHHHHHHHHHHHHHHHHHHh--CCccCccccCcccccCccccceeehhhhhhhhccccc
Confidence            99999999988776     9999999999999999999999  889999999999999999999999999987654432 


Q ss_pred             ---CcceeeccceeeccCccccchhh-hhHhHhCCcccccccccc
Q 019481          162 ---ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       162 ---~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~  202 (340)
                         ...+.+||+.|+|||.+.+..+. ..|+|+.|...+.+.++.
T Consensus       167 ~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~  211 (277)
T d1o6ya_         167 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE  211 (277)
T ss_dssp             ------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             cccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCC
Confidence               33456799999999655443322 235666555555554443

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=1.4e-42  Score=309.58  Aligned_cols=179  Identities=13%  Similarity=0.101  Sum_probs=147.4

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||+||+|+++.+++.||+|+++..    ..+++.+|+++|++++ ||||++++++|..     .+....+++||||+
T Consensus        45 ~G~fg~V~~a~~~~~~~~vAiK~i~~~----~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~-----~~~~~~~~v~e~~~  115 (328)
T d3bqca1          45 RGKYSEVFEAINITNNEKVVVKILKPV----KKKKIKREIKILENLRGGPNIITLADIVKD-----PVSRTPALVFEHVN  115 (328)
T ss_dssp             ECSSEEEEEEEETTTTEEEEEEEECSS----CHHHHHHHHHHHHHHTTSTTBCCEEEEEEC-----TTTCSEEEEEECCC
T ss_pred             cCcCeEEEEEEECCCCCEEEEEEECHH----HHHHHHHHHHHHHhccCCCCCcEEEEEEEe-----cCCCceeEEEeecC
Confidence            589999999999999999999999642    2456889999999996 9999999998753     24446789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCC-ceEEeccccceeecccCC
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETF-KCNLSDFSTAKVSAVENA  162 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~-~~kl~DFGla~~~~~~~~  162 (340)
                      +|+|.+..+   .     +++..++.+++||+.||+|||+  ++|+||||||+|||++.++ .+||+|||+|+.......
T Consensus       116 ~~~L~~~~~---~-----l~e~~i~~i~~qil~aL~~LH~--~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~  185 (328)
T d3bqca1         116 NTDFKQLYQ---T-----LTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE  185 (328)
T ss_dssp             SCBGGGTTT---S-----CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCC
T ss_pred             CCcHHHHhc---C-----CCHHHHHHHHHHHHHHHHHHhh--cccccccccccceEEcCCCCeeeecccccceeccCCCc
Confidence            999977643   2     9999999999999999999999  8899999999999998755 699999999998887777


Q ss_pred             cceeeccceeeccCccccchh--hhhHhHhCCcccccccccc
Q 019481          163 DLTALDTSSVSAQSGKTGMEM--KMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       163 ~~~~~gt~~~~~p~~~~~~~~--~~~~~~s~g~~~~~~~~~~  202 (340)
                      ....+||+.|+||+.+.+.+.  ...|+|+.|...+.+..+.
T Consensus       186 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~  227 (328)
T d3bqca1         186 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK  227 (328)
T ss_dssp             CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTC
T ss_pred             ccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCC
Confidence            778889999999976544322  1246677666666554444

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-43  Score=311.00  Aligned_cols=190  Identities=14%  Similarity=0.069  Sum_probs=142.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCcccccccccccccccc-CCcceeeeeeccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLT-GDRRYCWKNKWLM   82 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~-~~~~~~~~~~e~~   82 (340)
                      .|+||+||+|++..+++.||+|++.... .....+.+.+|+++|++++||||++++++|......+ ......+++|||+
T Consensus        20 ~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~   99 (318)
T d3blha1          20 QGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFC   99 (318)
T ss_dssp             ECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CEEEEEECC
T ss_pred             cCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceEEEEEecc
Confidence            5899999999999999999999987532 2334567889999999999999999999886543222 2345678999999


Q ss_pred             cCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc--
Q 019481           83 QKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE--  160 (340)
Q Consensus        83 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~--  160 (340)
                      +++.+.........     +++..++.+++||++||+|||+  ++|+||||||+|||++.++.+||+|||+|+.+...  
T Consensus       100 ~~~~~~~~~~~~~~-----~~~~~~~~i~~qil~~l~~lH~--~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~  172 (318)
T d3blha1         100 EHDLAGLLSNVLVK-----FTLSEIKRVMQMLLNGLYYIHR--NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN  172 (318)
T ss_dssp             CEEHHHHHTCTTCC-----CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEECTTSCEEECCCTTCEECCC---
T ss_pred             CCCccchhhhcccc-----cccHHHHHHHHHHHHHHHHhcc--CCEEecCcCchheeecCCCcEEeeecceeeecccccc
Confidence            87766655555444     9999999999999999999999  88999999999999999999999999999876542  


Q ss_pred             ---CCcceeeccceeeccCccccch-h-hhhHhHhCCccccccccc
Q 019481          161 ---NADLTALDTSSVSAQSGKTGME-M-KMAQLESGGWRAHDEAEK  201 (340)
Q Consensus       161 ---~~~~~~~gt~~~~~p~~~~~~~-~-~~~~~~s~g~~~~~~~~~  201 (340)
                         ....+.+||+.|+||+.+.+.. + ...|+|+.|...+.+.++
T Consensus       173 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g  218 (318)
T d3blha1         173 SQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR  218 (318)
T ss_dssp             --CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHS
T ss_pred             cccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhC
Confidence               2234467999999996543221 1 133566655555555443

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-42  Score=307.57  Aligned_cols=158  Identities=14%  Similarity=0.145  Sum_probs=127.1

Q ss_pred             CCcceEEEEEEcCCCCc----eEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeec
Q 019481            5 APSFSVLIHVPFPDDRD----DVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKW   80 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~----~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e   80 (340)
                      .|+||+||+|++..+++    +||+|.++.....+..+.+.+|++++++++|||||++++++.++        ..++++|
T Consensus        19 ~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~--------~~~~v~e   90 (317)
T d1xkka_          19 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS--------TVQLITQ   90 (317)
T ss_dssp             ECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS--------SEEEEEE
T ss_pred             cCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC--------CeeEEEE
Confidence            69999999999988776    57888876544455677899999999999999999999976532        3457789


Q ss_pred             cccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeeccc
Q 019481           81 LMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVE  160 (340)
Q Consensus        81 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  160 (340)
                      ++.+|+|.+.+.....    .+++..++.++.||++||+|||+  ++|+||||||+|||++.++++||+|||+|+.....
T Consensus        91 ~~~~~~l~~~~~~~~~----~~~~~~~~~i~~qi~~gl~yLH~--~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~  164 (317)
T d1xkka_          91 LMPFGCLLDYVREHKD----NIGSQYLLNWCVQIAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE  164 (317)
T ss_dssp             CCTTCBHHHHHHHTSS----SCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTT
T ss_pred             eccCCccccccccccc----CCCHHHHHHHHHHHHHHHHHHHH--cCcccCcchhhcceeCCCCCeEeeccccceecccc
Confidence            9999999998887654    49999999999999999999999  88999999999999999999999999999877554


Q ss_pred             CCc---ceeeccceeeccC
Q 019481          161 NAD---LTALDTSSVSAQS  176 (340)
Q Consensus       161 ~~~---~~~~gt~~~~~p~  176 (340)
                      ...   ....||+.|+|||
T Consensus       165 ~~~~~~~~~~gt~~y~APE  183 (317)
T d1xkka_         165 EKEYHAEGGKVPIKWMALE  183 (317)
T ss_dssp             CC--------CCTTTSCHH
T ss_pred             cccccccccccCccccChH
Confidence            332   2235788888885

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-42  Score=300.85  Aligned_cols=158  Identities=15%  Similarity=0.122  Sum_probs=134.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccC-chhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELIT-PLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||+||+|++..+++.||+|+++... .....+.+.+|+.+|++++||||++++++|.       +....+++++++.
T Consensus        12 ~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~-------~~~~~~iv~~~~~   84 (292)
T d1unla_          12 EGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH-------SDKKLTLVFEFCD   84 (292)
T ss_dssp             ECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEE-------CSSEEEEEEECCS
T ss_pred             cCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccc-------cccceeEEeeecc
Confidence            5899999999999999999999997633 3345678899999999999999999999775       4447789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +++|..++...+.     +++..++.++.|+++||+|||+  ++|+||||||+|||++.++.+||+|||.|+........
T Consensus        85 ~~~l~~~~~~~~~-----~~~~~~~~~~~q~~~aL~~lH~--~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~  157 (292)
T d1unla_          85 QDLKKYFDSCNGD-----LDPEIVKSFLFQLLKGLGFCHS--RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC  157 (292)
T ss_dssp             EEHHHHHHHTTTC-----CCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSC
T ss_pred             ccccccccccccc-----cchhHHHHHHHHHHHHHHHhhc--CCEeeecccCcccccccCCceeeeecchhhcccCCCcc
Confidence            9999998887665     9999999999999999999999  88999999999999999999999999999987654333


Q ss_pred             -ceeeccceeeccC
Q 019481          164 -LTALDTSSVSAQS  176 (340)
Q Consensus       164 -~~~~gt~~~~~p~  176 (340)
                       ....+++.+++|+
T Consensus       158 ~~~~~~~~~~~~pe  171 (292)
T d1unla_         158 YSAEVVTLWYRPPD  171 (292)
T ss_dssp             CCSCCSCGGGCCHH
T ss_pred             ceeeccccchhhhh
Confidence             2334556566663

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-42  Score=302.63  Aligned_cols=238  Identities=16%  Similarity=0.143  Sum_probs=165.2

Q ss_pred             CCcceEEEEEEcCCCCce--EEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDRDD--VMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~--vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||+||+|+++.++..  ||+|.++........+.+.+|+++|+++ +|||||++++++.+       .+..+++|||
T Consensus        20 ~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~-------~~~~~iV~ey   92 (309)
T d1fvra_          20 EGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-------RGYLYLAIEY   92 (309)
T ss_dssp             CGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEE-------TTEEEEEECC
T ss_pred             eCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEec-------CCeeEEEEEe
Confidence            599999999999888764  6777776544445567799999999999 79999999997753       3467899999


Q ss_pred             ccCCCHHHHhcccCC-----------CccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEec
Q 019481           82 MQKKGLENVHIGEHP-----------ASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSD  150 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~D  150 (340)
                      +++|+|.++++....           .....+++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|
T Consensus        93 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~--~~iiHrDlkp~NIL~~~~~~~kl~D  170 (309)
T d1fvra_          93 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ--KQFIHRDLAARNILVGENYVAKIAD  170 (309)
T ss_dssp             CTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEECGGGCEEECC
T ss_pred             cCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhc--CCccccccccceEEEcCCCceEEcc
Confidence            999999999976521           012359999999999999999999999  8899999999999999999999999


Q ss_pred             cccceeecccCCcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHH
Q 019481          151 FSTAKVSAVENADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNF  229 (340)
Q Consensus       151 FGla~~~~~~~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (340)
                      ||+|+............||..|++|+.....++. ..|+||.|...+++.+..                    .++|...
T Consensus       171 fG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~--------------------~~p~~~~  230 (309)
T d1fvra_         171 FGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG--------------------GTPYCGM  230 (309)
T ss_dssp             TTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTS--------------------CCTTTTC
T ss_pred             ccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcC--------------------CCCCCCC
Confidence            9999877666555666788888888543322221 224444444444332211                    1122211


Q ss_pred             HHHHHHHHhhhhccccccCcCCccc-------cccccccCCCCchHHHHhhcC
Q 019481          230 LYLLLIATLLSTITFLSALKITGCK-------SEEGYKNNSSLNPICQIVNQH  275 (340)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~p~~~-------~~~~l~~dP~~R~t~~~ll~h  275 (340)
                      .....    ...+..+..+.+|..+       ...||+.||++|||+++++++
T Consensus       231 ~~~~~----~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         231 TCAEL----YEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             CHHHH----HHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHH----HHHHHhcCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            11111    1111112233333333       336899999999999999876

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-41  Score=299.37  Aligned_cols=240  Identities=16%  Similarity=0.086  Sum_probs=157.5

Q ss_pred             CCcceEEEEEEcCC-----CCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeee
Q 019481            5 APSFSVLIHVPFPD-----DRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         5 ~G~fg~V~~~~~~~-----~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      .|+||.||+|++..     +++.||+|+++........+.+.+|..++.++ +|+||+++++++.      .+...++++
T Consensus        23 ~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~------~~~~~~~iv   96 (299)
T d1ywna1          23 RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT------KPGGPLMVI   96 (299)
T ss_dssp             ECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC------STTSCCEEE
T ss_pred             ecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeec------cCCCeEEEE
Confidence            58999999998643     45789999998655556667788899988887 5889999998543      234467899


Q ss_pred             eccccCCCHHHHhcccCCC-----------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceE
Q 019481           79 KWLMQKKGLENVHIGEHPA-----------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCN  147 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~k  147 (340)
                      ||||++|+|.++++.....           ....+++..+..++.||++||+|||+  ++|+||||||+|||+++++++|
T Consensus        97 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~--~~ivHrDlKp~NILl~~~~~~K  174 (299)
T d1ywna1          97 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVK  174 (299)
T ss_dssp             EECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEECGGGCEE
T ss_pred             EEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHh--CCCcCCcCCccceeECCCCcEE
Confidence            9999999999999764321           01348999999999999999999999  8899999999999999999999


Q ss_pred             EeccccceeecccC---CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccCCCCCCcccccCCCccCCc
Q 019481          148 LSDFSTAKVSAVEN---ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTEN  223 (340)
Q Consensus       148 l~DFGla~~~~~~~---~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  223 (340)
                      |+|||+|+......   ...+..||+.|+|||.+.+..+. ..|+|+.|...+++.+.. ..||......          
T Consensus       175 l~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~-~~p~~~~~~~----------  243 (299)
T d1ywna1         175 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-ASPYPGVKID----------  243 (299)
T ss_dssp             ECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS-CCSSTTCCCS----------
T ss_pred             EccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCC-CCCCCCCCHH----------
Confidence            99999998765433   23345789999999633221111 224555444444432211 0121111110          


Q ss_pred             hhHHHHHHHHHHHHhhhhccccccCcCCccc-------cccccccCCCCchHHHHhhcC
Q 019481          224 ETWNNFLYLLLIATLLSTITFLSALKITGCK-------SEEGYKNNSSLNPICQIVNQH  275 (340)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-------~~~~l~~dP~~R~t~~~ll~h  275 (340)
                         ..+..         .+..+..+..|..+       -..||+.||++|||++++++|
T Consensus       244 ---~~~~~---------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         244 ---EEFCR---------RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             ---HHHHH---------HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---HHHHH---------HHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence               00000         01111223333332       336899999999999999886

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-41  Score=306.05  Aligned_cols=187  Identities=16%  Similarity=0.086  Sum_probs=136.0

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||+||+|+++.+++.||+|++++. ......+.+.+|+.+|++++|||||+++++|..... .++..++|++||||.
T Consensus        27 ~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~-~~~~~~~~iv~Ey~~  105 (355)
T d2b1pa1          27 SGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKT-LEEFQDVYLVMELMD  105 (355)
T ss_dssp             CC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCS-TTTCCEEEEEEECCS
T ss_pred             cCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccc-cccCceeEEEEeccc
Confidence            689999999999999999999999863 334455678999999999999999999998875532 234568899999997


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      + ++.+.+..  .     +++..++.+++||+.||+|||+  +||+||||||+|||++.++.+|++|||+++........
T Consensus       106 ~-~l~~~~~~--~-----~~~~~i~~~~~qil~gl~~LH~--~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~~~  175 (355)
T d2b1pa1         106 A-NLCQVIQM--E-----LDHERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM  175 (355)
T ss_dssp             E-EHHHHHTS--C-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEECTTCCEEECCCCC----------
T ss_pred             h-HHHHhhhc--C-----CCHHHHHHHHHHHHHHHHHhhh--cccccccCCccccccccccceeeechhhhhcccccccc
Confidence            6 45454432  2     8999999999999999999999  88999999999999999999999999999988777777


Q ss_pred             ceeeccceeeccCccccchhh-hhHhHhCCcccccccccc
Q 019481          164 LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~  202 (340)
                      ...+||+.|+||+...+..+. ..|+|+.|...+.+..+.
T Consensus       176 ~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~  215 (355)
T d2b1pa1         176 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK  215 (355)
T ss_dssp             -----CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             ccccccccccChhhhcCCCCCCCcccccccchHHHHhhCC
Confidence            777899999999654432222 235566555555544433

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.9e-41  Score=297.25  Aligned_cols=163  Identities=18%  Similarity=0.186  Sum_probs=134.6

Q ss_pred             CCcceEEEEEEcC-----CCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            5 APSFSVLIHVPFP-----DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         5 ~G~fg~V~~~~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      .|+||+||+|+.+     .+++.||+|+++........+++.+|+++|++++||||+++++++..       ....++++
T Consensus        23 ~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~-------~~~~~~v~   95 (301)
T d1lufa_          23 EGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV-------GKPMCLLF   95 (301)
T ss_dssp             ECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-------SSSCEEEE
T ss_pred             eCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeecc-------CCceEEEE
Confidence            5999999999864     35678999999876656667889999999999999999999997653       34677999


Q ss_pred             ccccCCCHHHHhcccCCC-------------------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEe
Q 019481           80 WLMQKKGLENVHIGEHPA-------------------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILL  140 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl  140 (340)
                      ||+++|+|.+++......                   ....+++..+..++.|++.||+|||+  ++|+||||||+|||+
T Consensus        96 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~--~~ivHrDlKp~NILl  173 (301)
T d1lufa_          96 EYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE--RKFVHRDLATRNCLV  173 (301)
T ss_dssp             ECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEE
T ss_pred             EecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhccc--CCeEeeEEcccceEE
Confidence            999999999999753320                   12348999999999999999999999  889999999999999


Q ss_pred             cCCCceEEeccccceeecccCC---cceeeccceeeccC
Q 019481          141 DETFKCNLSDFSTAKVSAVENA---DLTALDTSSVSAQS  176 (340)
Q Consensus       141 ~~~~~~kl~DFGla~~~~~~~~---~~~~~gt~~~~~p~  176 (340)
                      |.++++||+|||+|+.......   ..+..||+.|+||+
T Consensus       174 d~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE  212 (301)
T d1lufa_         174 GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPE  212 (301)
T ss_dssp             CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHH
T ss_pred             CCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHH
Confidence            9999999999999987654332   23456888888885

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-41  Score=301.48  Aligned_cols=238  Identities=18%  Similarity=0.098  Sum_probs=177.3

Q ss_pred             CCcceEEEEEEc---CCCCceEEEEEeeccC---chhhHHHHHHHHHHhhhcCC-CccccccccccccccccCCcceeee
Q 019481            5 APSFSVLIHVPF---PDDRDDVMLKLHELIT---PLQLRRDDDGKLDSLEEIFH-PNQVKPSGYWSMNICLTGDRRYCWK   77 (340)
Q Consensus         5 ~G~fg~V~~~~~---~~~~~~vAiK~~~~~~---~~~~~~~~~~E~~~l~~l~h-pnIv~l~~~f~~~~~~~~~~~~~~~   77 (340)
                      .|+||+||+|++   +.+|+.||+|++++..   .....+.+.+|+++|++++| |||++++++|.+       ....++
T Consensus        34 ~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~-------~~~~~~  106 (322)
T d1vzoa_          34 TGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT-------ETKLHL  106 (322)
T ss_dssp             ETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE-------TTEEEE
T ss_pred             cCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeecc-------CCceee
Confidence            599999999986   4578999999987522   22345668899999999987 899999997653       347789


Q ss_pred             eeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceee
Q 019481           78 NKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVS  157 (340)
Q Consensus        78 ~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~  157 (340)
                      ++||+.+|+|.+++.....     +++..+..++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+|+.+
T Consensus       107 v~e~~~~~~L~~~i~~~~~-----~~e~~~~~~~~Qi~~al~~lH~--~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~  179 (322)
T d1vzoa_         107 ILDYINGGELFTHLSQRER-----FTEHEVQIYVGEIVLALEHLHK--LGIIYRDIKLENILLDSNGHVVLTDFGLSKEF  179 (322)
T ss_dssp             EECCCCSCBHHHHHHHHSC-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred             eeecccccHHHHHHHhccc-----ccHHHHHHHHHHHHHHHHHhhc--CCEEeccCCccceeecCCCCEEEeeccchhhh
Confidence            9999999999999998876     8999999999999999999999  88999999999999999999999999999876


Q ss_pred             ccc--CCcceeeccceeeccCccccchhh---hhHhHhCCccccccccccccCCCCCCcccccCCCccCCchhHHHHHHH
Q 019481          158 AVE--NADLTALDTSSVSAQSGKTGMEMK---MAQLESGGWRAHDEAEKAFQWPYKSSHLKNTRPNLKTENETWNNFLYL  232 (340)
Q Consensus       158 ~~~--~~~~~~~gt~~~~~p~~~~~~~~~---~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (340)
                      ...  ....+..|++.|++|+.+.+.+..   ..|+||.|...+.+.++.  .||.........             ...
T Consensus       180 ~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~--~PF~~~~~~~~~-------------~~i  244 (322)
T d1vzoa_         180 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA--SPFTVDGEKNSQ-------------AEI  244 (322)
T ss_dssp             CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSS--CTTSCTTSCCCH-------------HHH
T ss_pred             cccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCC--CCCCCCCHHHHH-------------HHH
Confidence            543  233456788888888665432211   347777777777666655  343332221110             000


Q ss_pred             HHHHHhhhhccccccCcCCccc-------cccccccCCCCch-----HHHHhhcCcce
Q 019481          233 LLIATLLSTITFLSALKITGCK-------SEEGYKNNSSLNP-----ICQIVNQHPFY  278 (340)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~p~~~-------~~~~l~~dP~~R~-----t~~~ll~hp~~  278 (340)
                             ........+.+|...       -..||+.||.+||     |++++++|||+
T Consensus       245 -------~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff  295 (322)
T d1vzoa_         245 -------SRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF  295 (322)
T ss_dssp             -------HHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGG
T ss_pred             -------HHhcccCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhh
Confidence                   111111223333333       3367999999999     58999999999

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-41  Score=298.20  Aligned_cols=160  Identities=20%  Similarity=0.154  Sum_probs=133.7

Q ss_pred             CCcceEEEEEEcCCCC---ceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecc
Q 019481            5 APSFSVLIHVPFPDDR---DDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWL   81 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~---~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~   81 (340)
                      .|+||+||+|++..++   ..||+|.++........+++.+|+++|++++|||||++++++..      .+...+++|||
T Consensus        37 ~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~------~~~~~~lv~E~  110 (311)
T d1r0pa_          37 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR------SEGSPLVVLPY  110 (311)
T ss_dssp             EETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEE------TTTEEEEEEEC
T ss_pred             ecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEe------cCCceEEEEEE
Confidence            5899999999986643   35899999865566677889999999999999999999996532      23467899999


Q ss_pred             ccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccC
Q 019481           82 MQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        82 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  161 (340)
                      |++|+|.+++.....    .+++..+..++.|++.||.|||+  ++|+||||||+|||+|+++.+||+|||+++......
T Consensus       111 ~~~g~l~~~~~~~~~----~~~~~~~~~i~~qia~gL~~lH~--~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~  184 (311)
T d1r0pa_         111 MKHGDLRNFIRNETH----NPTVKDLIGFGLQVAKGMKFLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE  184 (311)
T ss_dssp             CTTCBHHHHHHCTTC----CCBHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTT
T ss_pred             eecCchhhhhccccc----cchHHHHHHHHHHHHHhhhhhcc--cCcccCCccHHhEeECCCCCEEEecccchhhccccc
Confidence            999999999987664    38889999999999999999999  789999999999999999999999999998765532


Q ss_pred             Cc-----ceeeccceeeccC
Q 019481          162 AD-----LTALDTSSVSAQS  176 (340)
Q Consensus       162 ~~-----~~~~gt~~~~~p~  176 (340)
                      ..     ....||+.|++|+
T Consensus       185 ~~~~~~~~~~~gt~~y~aPE  204 (311)
T d1r0pa_         185 FDSVHNKTGAKLPVKWMALE  204 (311)
T ss_dssp             CCCTTCTTCSSCCGGGSCHH
T ss_pred             cccceecccccccccccChH
Confidence            22     2245777888884

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.9e-42  Score=306.96  Aligned_cols=186  Identities=14%  Similarity=0.081  Sum_probs=144.5

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeecc-CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELI-TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||+||+|++..+++.||+|++++. ......+.+.+|+++|++++|||||+++++|....... +...+ .+++++.
T Consensus        28 ~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~-~~~~~-~i~~~~~  105 (348)
T d2gfsa1          28 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE-EFNDV-YLVTHLM  105 (348)
T ss_dssp             GGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTT-TCCCC-EEEEECC
T ss_pred             cCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccc-cCceE-EEEEeec
Confidence            689999999999999999999999863 33445567899999999999999999999886543222 23334 4456677


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCc
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENAD  163 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  163 (340)
                      +|+|.+++..+ .     +++..++.+++||+.||+|||+  ++|+||||||+|||++.++.+|++|||+|.....  ..
T Consensus       106 gg~L~~~~~~~-~-----l~e~~~~~i~~qil~aL~~LH~--~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~--~~  175 (348)
T d2gfsa1         106 GADLNNIVKCQ-K-----LTDDHVQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EM  175 (348)
T ss_dssp             SEEHHHHHTTC-C-----CCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCGGGEEECTTCCEEECCC----CCTG--GG
T ss_pred             CCchhhhcccc-c-----ccHHHHHHHHHHHHHHHHHHHh--CCCcccccCCccccccccccccccccchhcccCc--cc
Confidence            99999999653 2     9999999999999999999999  8899999999999999999999999999976543  33


Q ss_pred             ceeeccceeeccCccccchhh--hhHhHhCCcccccccccc
Q 019481          164 LTALDTSSVSAQSGKTGMEMK--MAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       164 ~~~~gt~~~~~p~~~~~~~~~--~~~~~s~g~~~~~~~~~~  202 (340)
                      .+..||+.|++|+...+....  ..|+|+.|...+.+.++.
T Consensus       176 ~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~  216 (348)
T d2gfsa1         176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR  216 (348)
T ss_dssp             SSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             ccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCC
Confidence            456789999999755443322  346777666666665544

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-41  Score=289.58  Aligned_cols=228  Identities=14%  Similarity=0.131  Sum_probs=155.4

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||.||+|+++  ++.||+|++++.   ...+.+.+|++++++++||||+++++++..      +.+..+++|||+++
T Consensus        17 ~G~fg~Vy~~~~~--~~~vAvK~i~~~---~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~------~~~~~~lv~ey~~~   85 (262)
T d1byga_          17 KGEFGDVMLGDYR--GNKVAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIVE------EKGGLYIVTEYMAK   85 (262)
T ss_dssp             ECSSCEEEEEEET--TEEEEEEECCCC---C--HHHHHTHHHHTTCCCTTBCCEEEEECC------C--CCEEEECCCTT
T ss_pred             cCCCeEEEEEEEC--CeEEEEEEECcH---HHHHHHHHHHHHHHhCCCCCEeeEEEEEEe------cCCcEEEEEeccCC
Confidence            6999999999984  678999999643   334678999999999999999999996532      23356899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecccCCcc
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAVENADL  164 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~  164 (340)
                      |+|.+++.....   ..+++..++.++.||+.||+|||+  ++|+||||||+|||++.++++||+|||+++.....  ..
T Consensus        86 g~L~~~l~~~~~---~~l~~~~~~~i~~~i~~al~ylH~--~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~--~~  158 (262)
T d1byga_          86 GSLVDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLEG--NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--QD  158 (262)
T ss_dssp             EEHHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred             CCHHHHHHhcCC---CCCCHHHHHHHHHHHHhhcccccc--CceeccccchHhheecCCCCEeecccccceecCCC--Cc
Confidence            999999976543   358999999999999999999999  88999999999999999999999999999876443  33


Q ss_pred             eeeccceeeccCccccchhh-hhHhHhCCcccccccc-ccccCCCCCCcccccCCCccCCchhHHHHHHHHHHHHhhhhc
Q 019481          165 TALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAE-KAFQWPYKSSHLKNTRPNLKTENETWNNFLYLLLIATLLSTI  242 (340)
Q Consensus       165 ~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  242 (340)
                      +..+|..|+||+......+. ..|+||.|...+++.+ +.  +|+.......+.                       ..+
T Consensus       159 ~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~--~p~~~~~~~~~~-----------------------~~i  213 (262)
T d1byga_         159 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR--VPYPRIPLKDVV-----------------------PRV  213 (262)
T ss_dssp             ---CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC--CSCTTSCGGGHH-----------------------HHH
T ss_pred             cccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCC--CCCCCCCHHHHH-----------------------HHH
Confidence            45678888888533222211 2355555555544432 22  222221111110                       001


Q ss_pred             cccccCcCCccc-------cccccccCCCCchHHHHhhcC
Q 019481          243 TFLSALKITGCK-------SEEGYKNNSSLNPICQIVNQH  275 (340)
Q Consensus       243 ~~~~~~~~p~~~-------~~~~l~~dP~~R~t~~~ll~h  275 (340)
                      ..+..+..|..+       -..|++.||.+|||+++++++
T Consensus       214 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~  253 (262)
T d1byga_         214 EKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ  253 (262)
T ss_dssp             TTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HcCCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            111222233322       337899999999999998763

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-41  Score=294.41  Aligned_cols=158  Identities=15%  Similarity=0.095  Sum_probs=121.1

Q ss_pred             CCcceEEEEEEcCCC---CceEEEEEeecc--CchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            5 APSFSVLIHVPFPDD---RDDVMLKLHELI--TPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~---~~~vAiK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      .|+||+||+|++...   ...||+|++++.  ...+..+.+.+|+++|++++|||||++++++.+.        ..++++
T Consensus        18 ~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~--------~~~lv~   89 (273)
T d1u46a_          18 DGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP--------PMKMVT   89 (273)
T ss_dssp             ----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS--------SCEEEE
T ss_pred             cCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeec--------chheee
Confidence            699999999986432   246899998753  2334457899999999999999999999977532        456899


Q ss_pred             ccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccceeecc
Q 019481           80 WLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSAV  159 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  159 (340)
                      ||+++|++.+.+..+..    .+++..++.++.||+.||+|||+  ++|+||||||+|||++.++.+||+|||+++....
T Consensus        90 e~~~~~~l~~~~~~~~~----~l~~~~~~~~~~qi~~gl~ylH~--~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~  163 (273)
T d1u46a_          90 ELAPLGSLLDRLRKHQG----HFLLGTLSRYAVQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ  163 (273)
T ss_dssp             ECCTTCBHHHHHHHHGG----GSCHHHHHHHHHHHHHHHHHHHH--TTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred             eeecCcchhhhhhcccC----CCCHHHHHHHHHHHHHHHHHhhh--CCEeeeeecHHHhccccccceeeccchhhhhccc
Confidence            99999999998887654    49999999999999999999999  8899999999999999999999999999998755


Q ss_pred             cCCc----ceeeccceeeccC
Q 019481          160 ENAD----LTALDTSSVSAQS  176 (340)
Q Consensus       160 ~~~~----~~~~gt~~~~~p~  176 (340)
                      ....    ....||..|+||+
T Consensus       164 ~~~~~~~~~~~~~~~~~~aPE  184 (273)
T d1u46a_         164 NDDHYVMQEHRKVPFAWCAPE  184 (273)
T ss_dssp             -CCEEEC-----CCGGGCCHH
T ss_pred             CCCcceecCccccCcccCCHH
Confidence            4332    2234566666664

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-40  Score=289.30  Aligned_cols=163  Identities=17%  Similarity=0.141  Sum_probs=131.4

Q ss_pred             CCcceEEEEEEcCCCC-------ceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceee
Q 019481            5 APSFSVLIHVPFPDDR-------DDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCW   76 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~-------~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~   76 (340)
                      .|+||.||+|++..++       ..||+|+++..........+.+|...+.++ +|||||+++++|.       ++...+
T Consensus        23 ~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~-------~~~~~~   95 (299)
T d1fgka_          23 EGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-------QDGPLY   95 (299)
T ss_dssp             -----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-------SSSSCE
T ss_pred             ecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccc-------cCCeEE
Confidence            6999999999876554       479999998766666678899999999998 7999999999765       344678


Q ss_pred             eeeccccCCCHHHHhcccCCC-----------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCc
Q 019481           77 KNKWLMQKKGLENVHIGEHPA-----------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFK  145 (340)
Q Consensus        77 ~~~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~  145 (340)
                      ++||||++|+|.+++......           ....+++..+..++.||+.||+|||+  ++|+||||||+|||++.++.
T Consensus        96 ~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~--~~ivHrDiKp~NiLl~~~~~  173 (299)
T d1fgka_          96 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNV  173 (299)
T ss_dssp             EEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEECTTCC
T ss_pred             EEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhh--CCEEeeeecccceeecCCCC
Confidence            999999999999999866421           12358999999999999999999999  88999999999999999999


Q ss_pred             eEEeccccceeecccCC---cceeeccceeeccC
Q 019481          146 CNLSDFSTAKVSAVENA---DLTALDTSSVSAQS  176 (340)
Q Consensus       146 ~kl~DFGla~~~~~~~~---~~~~~gt~~~~~p~  176 (340)
                      +||+|||+++.......   .....||+.|+||+
T Consensus       174 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  207 (299)
T d1fgka_         174 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE  207 (299)
T ss_dssp             EEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHH
T ss_pred             eEeccchhhccccccccccccccCCCChhhhhhh
Confidence            99999999987765432   23356788888874

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-40  Score=290.07  Aligned_cols=163  Identities=15%  Similarity=0.168  Sum_probs=134.2

Q ss_pred             CCcceEEEEEEcC-----CCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeee
Q 019481            5 APSFSVLIHVPFP-----DDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNK   79 (340)
Q Consensus         5 ~G~fg~V~~~~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~   79 (340)
                      .|+||+||+|.+.     .+++.||+|+++.....+....+.+|++++++++|||||++++++.       .....+++|
T Consensus        30 ~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~-------~~~~~~lv~  102 (308)
T d1p4oa_          30 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS-------QGQPTLVIM  102 (308)
T ss_dssp             ECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC-------SSSSCEEEE
T ss_pred             eCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEe-------cCCceeEEE
Confidence            5899999999874     2457899999986555666677999999999999999999999654       344678999


Q ss_pred             ccccCCCHHHHhcccCCC-----ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceEEeccccc
Q 019481           80 WLMQKKGLENVHIGEHPA-----SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCNLSDFSTA  154 (340)
Q Consensus        80 e~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla  154 (340)
                      ||+++|+|.+++......     ....+++..+..++.|+++||.|||+  ++|+||||||+|||+|.++++||+|||+|
T Consensus       103 e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~--~~ivHrDlk~~NiLld~~~~~Kl~DFGla  180 (308)
T d1p4oa_         103 ELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMT  180 (308)
T ss_dssp             ECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH--TTCBCSCCSGGGEEECTTCCEEECCTTCC
T ss_pred             eecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhh--CCeeeceEcCCceeecCCceEEEeecccc
Confidence            999999999998754210     01237899999999999999999999  88999999999999999999999999999


Q ss_pred             eeecccCC---cceeeccceeeccC
Q 019481          155 KVSAVENA---DLTALDTSSVSAQS  176 (340)
Q Consensus       155 ~~~~~~~~---~~~~~gt~~~~~p~  176 (340)
                      +.+.....   .....||+.|++|+
T Consensus       181 ~~~~~~~~~~~~~~~~~t~~y~aPe  205 (308)
T d1p4oa_         181 RDIYETDYYRKGGKGLLPVRWMSPE  205 (308)
T ss_dssp             CGGGGGGCEEGGGSSEECGGGCCHH
T ss_pred             eeccCCcceeeccceecccccCCHH
Confidence            87655332   23346788888885

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-39  Score=285.27  Aligned_cols=185  Identities=15%  Similarity=0.118  Sum_probs=139.8

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||+||+|++  +|+.||+|+++...  ......++|+..+++++|||||++++++....   .+....+++||||++
T Consensus        13 ~G~fg~Vy~~~~--~g~~vAvK~~~~~~--~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~---~~~~~~~lv~Ey~~~   85 (303)
T d1vjya_          13 KGRFGEVWRGKW--RGEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAADNKDN---GTWTQLWLVSDYHEH   85 (303)
T ss_dssp             CCSSSEEEEEEE--TTEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC---SSSEEEEEEEECCTT
T ss_pred             eCCCeEEEEEEE--CCEEEEEEEECccc--hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCC---CcceEEEEEEecccC
Confidence            799999999986  57899999996422  22222345666677889999999999775432   122357899999999


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcC------CCceecCCCCCCcEEecCCCceEEeccccceeec
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSS------EKQVIYRDFKAPNILLDETFKCNLSDFSTAKVSA  158 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~------~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  158 (340)
                      |+|.+++++..      +++..+..++.|++.||+|||+.      .++|+||||||+|||++.++++||+|||+++...
T Consensus        86 g~L~~~l~~~~------l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~  159 (303)
T d1vjya_          86 GSLFDYLNRYT------VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD  159 (303)
T ss_dssp             CBHHHHHHHCC------BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred             CCHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCcccccc
Confidence            99999998643      89999999999999999999962      2589999999999999999999999999999876


Q ss_pred             ccCC-----cceeeccceeeccCccccc-------hhhhhHhHhCCcccccccccc
Q 019481          159 VENA-----DLTALDTSSVSAQSGKTGM-------EMKMAQLESGGWRAHDEAEKA  202 (340)
Q Consensus       159 ~~~~-----~~~~~gt~~~~~p~~~~~~-------~~~~~~~~s~g~~~~~~~~~~  202 (340)
                      ....     .....||+.|+|||.+.+.       .-...|+|+.|...+++.++.
T Consensus       160 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~  215 (303)
T d1vjya_         160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRC  215 (303)
T ss_dssp             TTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTB
T ss_pred             CCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCC
Confidence            5432     2346799999999643321       111246677666666655443

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.4e-40  Score=289.07  Aligned_cols=185  Identities=20%  Similarity=0.096  Sum_probs=144.2

Q ss_pred             CCcceEEEEEEc-----CCCCceEEEEEeeccCchhhHHHHHHHHHHhhhc-CCCccccccccccccccccCCcceeeee
Q 019481            5 APSFSVLIHVPF-----PDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEI-FHPNQVKPSGYWSMNICLTGDRRYCWKN   78 (340)
Q Consensus         5 ~G~fg~V~~~~~-----~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~f~~~~~~~~~~~~~~~~   78 (340)
                      +|+||.||+|++     ..+++.||+|+++..........+.+|+.+++++ +|||||++++++.       +....+++
T Consensus        33 ~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~-------~~~~~~lv  105 (311)
T d1t46a_          33 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT-------IGGPTLVI  105 (311)
T ss_dssp             ECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-------SSSSCEEE
T ss_pred             ecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEe-------eCCEEEEE
Confidence            699999999975     3567789999998766566677899999999999 6999999999765       33467899


Q ss_pred             eccccCCCHHHHhcccCCC-------------ccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCc
Q 019481           79 KWLMQKKGLENVHIGEHPA-------------SVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFK  145 (340)
Q Consensus        79 ~e~~~~gsL~~~l~~~~~~-------------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~  145 (340)
                      ||||++|+|.++++.....             ....+++..+..++.||++||+|||+  ++|+||||||+|||++.++.
T Consensus       106 mE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~--~~ivHrDLKp~NIl~~~~~~  183 (311)
T d1t46a_         106 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRI  183 (311)
T ss_dssp             EECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCSGGGEEEETTTE
T ss_pred             EEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh--CCeeecccccccccccccCc
Confidence            9999999999999765421             12348999999999999999999999  88999999999999999999


Q ss_pred             eEEeccccceeecccCCc---ceeeccceeeccCccccchhh-hhHhHhCCcccccc
Q 019481          146 CNLSDFSTAKVSAVENAD---LTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDE  198 (340)
Q Consensus       146 ~kl~DFGla~~~~~~~~~---~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~  198 (340)
                      +||+|||+++........   ...+||+.|+||+......+. ..|+|+.|...+.+
T Consensus       184 ~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~el  240 (311)
T d1t46a_         184 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL  240 (311)
T ss_dssp             EEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             ccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHH
Confidence            999999999877654322   234678888888533321111 22455544444443

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3e-37  Score=271.43  Aligned_cols=185  Identities=18%  Similarity=0.151  Sum_probs=144.2

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCccccccccccccccccCCcceeeeeeccccC
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQK   84 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~~   84 (340)
                      .|+||+||+|++..+++.||+|++....   ..+++.+|++++++++|+|++..++.+.      .+....+++|||+ +
T Consensus        17 ~G~fG~Vy~a~~~~~~~~vAvK~~~~~~---~~~~~~~E~~i~~~l~~~~~i~~~~~~~------~~~~~~~ivme~~-~   86 (299)
T d1ckia_          17 SGSFGDIYLGTDIAAGEEVAIKLECVKT---KHPQLHIESKIYKMMQGGVGIPTIRWCG------AEGDYNVMVMELL-G   86 (299)
T ss_dssp             ECSSSEEEEEEETTTTEEEEEEEEESCT---TSCCHHHHHHHHHHSTTSTTCCCEEEEE------EETTEEEEEEECC-C
T ss_pred             eCCCcEEEEEEECCCCCEEEEEEEchhc---cCHHHHHHHHHHHHccCCCcccEEEEEE------ecCCEEEEEEEEc-C
Confidence            6999999999999999999999987532   2345789999999999888776655332      2344778999999 5


Q ss_pred             CCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC---CCceEEeccccceeecccC
Q 019481           85 KGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE---TFKCNLSDFSTAKVSAVEN  161 (340)
Q Consensus        85 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~---~~~~kl~DFGla~~~~~~~  161 (340)
                      |+|.+.+.....    .+++..+..++.|++.||+|||+  ++|+||||||+|||++.   +..+||+|||+|+.+....
T Consensus        87 ~~l~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~--~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~  160 (299)
T d1ckia_          87 PSLEDLFNFCSR----KFSLKTVLLLADQMISRIEYIHS--KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR  160 (299)
T ss_dssp             CBHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHH--TTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTT
T ss_pred             CchhhhhhhccC----CCcHHHHHHHHHHHHHHHHHHHH--CCeeeccCCHhhccccccCCCceeeeeccCcceeccccc
Confidence            677777665443    39999999999999999999999  88999999999999864   5679999999999876533


Q ss_pred             C--------cceeeccceeeccCccccchhh-hhHhHhCCccccccccccccC
Q 019481          162 A--------DLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQW  205 (340)
Q Consensus       162 ~--------~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~  205 (340)
                      .        ..+.+||+.|+||+...+.++. ..|+||.|...+++.++..+|
T Consensus       161 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~  213 (299)
T d1ckia_         161 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW  213 (299)
T ss_dssp             TCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             cccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcc
Confidence            2        2345799999999766654433 347787777777766655334

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1e-36  Score=266.95  Aligned_cols=184  Identities=15%  Similarity=0.073  Sum_probs=148.4

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCC-CccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFH-PNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~h-pnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      .|+||+||+|++..+++.||+|+++...   ..+.+.+|+++++.++| +||+.+++++..       ....+++|||+ 
T Consensus        15 ~G~fG~Vy~a~~~~~~~~vAvK~~~~~~---~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~-------~~~~~~vme~~-   83 (293)
T d1csna_          15 EGSFGVIFEGTNLLNNQQVAIKFEPRRS---DAPQLRDEYRTYKLLAGCTGIPNVYYFGQE-------GLHNVLVIDLL-   83 (293)
T ss_dssp             ECSSCEEEEEEETTTTEEEEEEEEECCT---TSCCHHHHHHHHHHTTTCTTCCCEEEEEEE-------TTEEEEEEECC-
T ss_pred             cCCCeEEEEEEECCCCCEEEEEEEcccc---CcHHHHHHHHHHHHhcCCCCCCEEEEEeec-------CCccEEEEEec-
Confidence            5899999999999999999999986432   23457789999999975 899999986653       34677999999 


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecC-----CCceEEeccccceeec
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDE-----TFKCNLSDFSTAKVSA  158 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~-----~~~~kl~DFGla~~~~  158 (340)
                      +|+|.+++...+.    .+++.++..++.|++.||+|||+  ++|+||||||+|||++.     ++.+||+|||+|+...
T Consensus        84 ~~~l~~~~~~~~~----~~~~~~~~~i~~q~~~~l~~lH~--~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~  157 (293)
T d1csna_          84 GPSLEDLLDLCGR----KFSVKTVAMAAKQMLARVQSIHE--KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR  157 (293)
T ss_dssp             CCBHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHT--TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred             CCCHHHHHHhhcc----chhhHHHHHHHHHHHHHHHHHHH--CCceeccCCccceeecCcccccCCceEEcccceeEEcc
Confidence            6899999987654    39999999999999999999999  88999999999999974     5789999999999865


Q ss_pred             ccC--------CcceeeccceeeccCccccchhh-hhHhHhCCccccccccccccC
Q 019481          159 VEN--------ADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDEAEKAFQW  205 (340)
Q Consensus       159 ~~~--------~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~~~~~~~~  205 (340)
                      ...        ...+.+||+.|+|||.+.+.++. ..|+||.|...+.+.++..+|
T Consensus       158 ~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf  213 (293)
T d1csna_         158 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW  213 (293)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             cCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcC
Confidence            432        23356799999999766655443 347888777777776665444

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.6e-34  Score=256.61  Aligned_cols=181  Identities=12%  Similarity=0.034  Sum_probs=128.1

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-----------CCccccccccccccccccCCcc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-----------HPNQVKPSGYWSMNICLTGDRR   73 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-----------hpnIv~l~~~f~~~~~~~~~~~   73 (340)
                      .|+||+||+|+++.+++.||+|++++.  ....+.+.+|++++++++           |+||++++++|...     +..
T Consensus        23 ~G~fg~Vy~~~~~~~g~~vAvKvi~~~--~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~-----~~~   95 (362)
T d1q8ya_          23 WGHFSTVWLAKDMVNNTHVAMKIVRGD--KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK-----GPN   95 (362)
T ss_dssp             ECSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE-----ETT
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEEecc--ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec-----ccc
Confidence            589999999999999999999999742  334466788999988875           57899999977543     222


Q ss_pred             eeeeeeccccCC-CHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCc------e
Q 019481           74 YCWKNKWLMQKK-GLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFK------C  146 (340)
Q Consensus        74 ~~~~~~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~------~  146 (340)
                      +.+.+++++..+ +..........   ..+++..++.++.||++||+|||+. .+|+||||||+|||++.++.      +
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~i~~qil~al~~lh~~-~~IvHrDlKp~NIll~~~~~~~~~~~~  171 (362)
T d1q8ya_          96 GVHVVMVFEVLGENLLALIKKYEH---RGIPLIYVKQISKQLLLGLDYMHRR-CGIIHTDIKPENVLMEIVDSPENLIQI  171 (362)
T ss_dssp             EEEEEEEECCCCEEHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHHHT-TCEECSCCSGGGEEEEEEETTTTEEEE
T ss_pred             ceeeeeeecccccccccccccccc---cCCcHHHHHHHHHHHHHHHHHHhhh-cCcccccCChhHeeeeccCccccccee
Confidence            444555544333 33333332222   3589999999999999999999961 44999999999999987654      9


Q ss_pred             EEeccccceeecccCCcceeeccceeeccCccccchhh-hhHhHhCCcccccc
Q 019481          147 NLSDFSTAKVSAVENADLTALDTSSVSAQSGKTGMEMK-MAQLESGGWRAHDE  198 (340)
Q Consensus       147 kl~DFGla~~~~~~~~~~~~~gt~~~~~p~~~~~~~~~-~~~~~s~g~~~~~~  198 (340)
                      |++|||.|+....  .....+||+.|+|||.+...++. ..|+|+.|...+.+
T Consensus       172 kl~dfg~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el  222 (362)
T d1q8ya_         172 KIADLGNACWYDE--HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFEL  222 (362)
T ss_dssp             EECCCTTCEETTB--CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHH
T ss_pred             eEeeccccccccc--ccccccccccccChhhccccCCCccccccchHHHHHHH
Confidence            9999999986543  34566799999999633322211 22455544444443

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.90  E-value=2.4e-24  Score=175.94  Aligned_cols=127  Identities=14%  Similarity=0.124  Sum_probs=98.4

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCc-----------------hhhHHHHHHHHHHhhhcCCCcccccccccccccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITP-----------------LQLRRDDDGKLDSLEEIFHPNQVKPSGYWSMNIC   67 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~-----------------~~~~~~~~~E~~~l~~l~hpnIv~l~~~f~~~~~   67 (340)
                      +|+||+||+|++. +|+.||+|+++....                 ........+|...+.++.|+++++.+++.     
T Consensus        10 ~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~-----   83 (191)
T d1zara2          10 EGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE-----   83 (191)
T ss_dssp             ECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE-----
T ss_pred             eCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec-----
Confidence            5999999999985 578999998753110                 01123456788999999999999887632     


Q ss_pred             ccCCcceeeeeeccccCCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcCCCceecCCCCCCcEEecCCCceE
Q 019481           68 LTGDRRYCWKNKWLMQKKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSSEKQVIYRDFKAPNILLDETFKCN  147 (340)
Q Consensus        68 ~~~~~~~~~~~~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~iiHrDlKp~NILl~~~~~~k  147 (340)
                            ..+++|||++++.+.+            +++..+..++.|+++||+|||+  ++|+||||||+|||++++ .++
T Consensus        84 ------~~~lvme~~~~~~~~~------------l~~~~~~~i~~ql~~~l~~lH~--~giiHrDiKP~NILv~~~-~~~  142 (191)
T d1zara2          84 ------GNAVLMELIDAKELYR------------VRVENPDEVLDMILEEVAKFYH--RGIVHGDLSQYNVLVSEE-GIW  142 (191)
T ss_dssp             ------TTEEEEECCCCEEGGG------------CCCSCHHHHHHHHHHHHHHHHH--TTEECSCCSTTSEEEETT-EEE
T ss_pred             ------CCEEEEEeeccccccc------------hhhHHHHHHHHHHHHHHHHHhh--CCEEEccCChhheeeeCC-CEE
Confidence                  1248899998755432            4445577899999999999999  779999999999999865 589


Q ss_pred             Eeccccceeec
Q 019481          148 LSDFSTAKVSA  158 (340)
Q Consensus       148 l~DFGla~~~~  158 (340)
                      |+|||+|+...
T Consensus       143 liDFG~a~~~~  153 (191)
T d1zara2         143 IIDFPQSVEVG  153 (191)
T ss_dssp             ECCCTTCEETT
T ss_pred             EEECCCcccCC
Confidence            99999997654

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.46  E-value=6.3e-07  Score=74.65  Aligned_cols=132  Identities=11%  Similarity=0.020  Sum_probs=82.9

Q ss_pred             CCcceEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcC-CCccccccccccccccccCCcceeeeeecccc
Q 019481            5 APSFSVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIF-HPNQVKPSGYWSMNICLTGDRRYCWKNKWLMQ   83 (340)
Q Consensus         5 ~G~fg~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~f~~~~~~~~~~~~~~~~~e~~~   83 (340)
                      +++.+.||+..  .+++.+.+|+..... ......+.+|...+..+. +--+.+++.+..       +.+..+++|++++
T Consensus        24 G~s~~~v~rv~--~~~~~~vlk~~~~~~-~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~-------~~~~~~lv~~~l~   93 (263)
T d1j7la_          24 GMSPAKVYKLV--GENENLYLKMTDSRY-KGTTYDVEREKDMMLWLEGKLPVPKVLHFER-------HDGWSNLLMSEAD   93 (263)
T ss_dssp             CCSSSEEEEEE--CSSCEEEEEEECGGG-TTSTTCHHHHHHHHHHHTTTSCCCCEEEEEE-------ETTEEEEEEECCS
T ss_pred             CCCCCcEEEEE--eCCCeEEEEEcCCCc-ccchhhHHHHHHHHHHHhccCCCCcEEEEEe-------cCCceEEEEEecc
Confidence            34456899986  345567888876322 122345678888888774 222345554322       3346789999999


Q ss_pred             CCCHHHHhcccCCCccccCCHHHHHHHHHHHHHHHHHhhcC---------------------------------------
Q 019481           84 KKGLENVHIGEHPASVRQLRRAERLEIVTKMCQDLAFLHSS---------------------------------------  124 (340)
Q Consensus        84 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~---------------------------------------  124 (340)
                      |.++.+......          ....++.++++.+..||+.                                       
T Consensus        94 G~~~~~~~~~~~----------~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (263)
T d1j7la_          94 GVLCSEEYEDEQ----------SPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP  163 (263)
T ss_dssp             SEEHHHHTTTCS----------CHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCS
T ss_pred             cccccccccccc----------cHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhccccccc
Confidence            887765543211          1222344455555555541                                       


Q ss_pred             ------------------CCceecCCCCCCcEEecCCCceEEecccccee
Q 019481          125 ------------------EKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus       125 ------------------~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                                        ...++|+|+.|.|||+++++.+-|+||+.+..
T Consensus       164 ~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             CSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             chHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence                              01478999999999998766667999998864

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.06  E-value=4.3e-06  Score=69.02  Aligned_cols=67  Identities=7%  Similarity=-0.036  Sum_probs=43.6

Q ss_pred             eEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCc--cccccccccccccccCCcceeeeeeccccCCC
Q 019481            9 SVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPN--QVKPSGYWSMNICLTGDRRYCWKNKWLMQKKG   86 (340)
Q Consensus         9 g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpn--Iv~l~~~f~~~~~~~~~~~~~~~~~e~~~~gs   86 (340)
                      +.||+... .++..+.+|.....    ....+.+|...++.+....  +.+++.+.       .+.+..+++|++++|-+
T Consensus        25 ~~v~r~~~-~~~~~~vlK~~~~~----~~~~l~~E~~~l~~L~~~gvpvP~v~~~~-------~~~~~~~~v~~~i~G~~   92 (255)
T d1nd4a_          25 AAVFRLSA-QGRPVLFVKTDLSG----ALNELQDEAARLSWLATTGVPCAAVLDVV-------TEAGRDWLLLGEVPGQD   92 (255)
T ss_dssp             CEEEEEEC-TTSCCEEEEEECSC----TTSCHHHHHHHHHHHHTTTCCBCCEEEEE-------ECSSCEEEEEECCSSEE
T ss_pred             CeEEEEEe-CCCCEEEEEeCCcc----CHhHHHHHHHHHHHHHhcCCCCCceeeec-------ccccceEEEEEeeeccc
Confidence            67999976 44666888987532    2234678888888775333  34555422       24456789999998755


Q ss_pred             H
Q 019481           87 L   87 (340)
Q Consensus        87 L   87 (340)
                      +
T Consensus        93 ~   93 (255)
T d1nd4a_          93 L   93 (255)
T ss_dssp             T
T ss_pred             c
Confidence            4

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.90  E-value=1.8e-05  Score=69.74  Aligned_cols=74  Identities=7%  Similarity=-0.141  Sum_probs=42.5

Q ss_pred             CCCcceEEEEEEcCCCCceEEEEEeec--cC----chhhHHHHHHHHHHhhhcC-C--CccccccccccccccccCCcce
Q 019481            4 SAPSFSVLIHVPFPDDRDDVMLKLHEL--IT----PLQLRRDDDGKLDSLEEIF-H--PNQVKPSGYWSMNICLTGDRRY   74 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~~~~~vAiK~~~~--~~----~~~~~~~~~~E~~~l~~l~-h--pnIv~l~~~f~~~~~~~~~~~~   74 (340)
                      ++|....||++.+..+++.+++|.-..  ..    ......+..+|.+.|+.+. +  ..+.+++.+         +...
T Consensus        35 g~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~---------d~~~  105 (392)
T d2pula1          35 GDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS---------DTEM  105 (392)
T ss_dssp             CSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE---------ETTT
T ss_pred             CCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE---------cCCC
Confidence            357778999999988888999997542  10    1112334567888887763 2  234455541         2224


Q ss_pred             eeeeeccccCCC
Q 019481           75 CWKNKWLMQKKG   86 (340)
Q Consensus        75 ~~~~~e~~~~gs   86 (340)
                      .+++||++++..
T Consensus       106 ~~lvmE~L~~~~  117 (392)
T d2pula1         106 AVTVMEDLSHLK  117 (392)
T ss_dssp             TEEEECCCTTSE
T ss_pred             CEEEEeccCCcc
Confidence            557899886543

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=97.44  E-value=0.00038  Score=59.31  Aligned_cols=141  Identities=9%  Similarity=-0.006  Sum_probs=72.6

Q ss_pred             eEEEEEEcCCCCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCcc--ccccccccccccccCCcceeeeeeccccCCC
Q 019481            9 SVLIHVPFPDDRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQ--VKPSGYWSMNICLTGDRRYCWKNKWLMQKKG   86 (340)
Q Consensus         9 g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnI--v~l~~~f~~~~~~~~~~~~~~~~~e~~~~gs   86 (340)
                      -.||+++.. +|+.|++|+.+...  ...+++..|.+.+..|...+|  +....  ..+........+.+.++++++|..
T Consensus        36 N~vy~v~~~-dg~~~VlK~~rp~~--~s~~~i~~E~~~l~~L~~~gipv~~p~~--~~g~~~~~~~~~~~~l~~~~~G~~  110 (325)
T d1zyla1          36 NRVYQFQDE-DRRRFVVKFYRPER--WTADQILEEHQFALQLVNDEVPVAAPVA--FNGQTLLNHQGFYFAVFPSVGGRQ  110 (325)
T ss_dssp             SEEEEECCT-TCCCEEEEEECTTT--SCHHHHHHHHHHHHHHHHTTCSBCCCCC--BTTBSCEEETTEEEEEEECCCCEE
T ss_pred             ceeEEEEcC-CCCEEEEEEeCCCC--CCHHHHHHHHHHHHHHHhcCCCCCCcee--cCCCeeeeeeeEEEEEEeecCCcC
Confidence            379999874 56779999986422  234567788888888752222  11111  111222223335566677665421


Q ss_pred             H------------------HHHhcccCCCccccCC-------------------HH---HHHHHHHHHHHHHHHhh-c-C
Q 019481           87 L------------------ENVHIGEHPASVRQLR-------------------RA---ERLEIVTKMCQDLAFLH-S-S  124 (340)
Q Consensus        87 L------------------~~~l~~~~~~~~~~l~-------------------~~---~~~~i~~qi~~~L~yLH-~-~  124 (340)
                      +                  ..............++                   ..   .....+.++...+.-.- + .
T Consensus       111 ~~~~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  190 (325)
T d1zyla1         111 FEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDF  190 (325)
T ss_dssp             CCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCS
T ss_pred             CCCCCHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccC
Confidence            1                  1111111110001111                   11   12223333333333221 1 2


Q ss_pred             CCceecCCCCCCcEEecCCCceEEecccccee
Q 019481          125 EKQVIYRDFKAPNILLDETFKCNLSDFSTAKV  156 (340)
Q Consensus       125 ~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  156 (340)
                      ..+++|+|+.|.|||++. + ..++||+-+..
T Consensus       191 p~~liHgDlh~~NvL~~~-~-~~~IDFdd~~~  220 (325)
T d1zyla1         191 TVLRLHGDCHAGNILWRD-G-PMFVDLDDARN  220 (325)
T ss_dssp             CCEECCSSCSGGGEEESS-S-EEECCCTTCCE
T ss_pred             CceeecCCCCcccEEEeC-C-ceEEechhccc
Confidence            356999999999999974 3 45899998753

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.06  E-value=0.00072  Score=59.15  Aligned_cols=68  Identities=9%  Similarity=0.014  Sum_probs=41.6

Q ss_pred             CCCcceEEEEEEcCC-------CCceEEEEEeeccCchhhHHHHHHHHHHhhhcCCCcc-ccccccccccccccCCccee
Q 019481            4 SAPSFSVLIHVPFPD-------DRDDVMLKLHELITPLQLRRDDDGKLDSLEEIFHPNQ-VKPSGYWSMNICLTGDRRYC   75 (340)
Q Consensus         4 ~~G~fg~V~~~~~~~-------~~~~vAiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnI-v~l~~~f~~~~~~~~~~~~~   75 (340)
                      ++|-.-.+|++....       ..+.|.+++....   .......+|..+++.+.-.++ .+++++|..           
T Consensus        51 ~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~---~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~-----------  116 (395)
T d1nw1a_          51 KGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP---ETESHLVAESVIFTLLSERHLGPKLYGIFSG-----------  116 (395)
T ss_dssp             CCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC---CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT-----------
T ss_pred             CCccccceEEEEeCCCCccccCCCCcEEEEecCCc---chhhHHHHHHHHHHHHHhCCCCCeEEEEcCC-----------
Confidence            456667899988653       2356777776521   122345689999988863344 477775531           


Q ss_pred             eeeeccccCC
Q 019481           76 WKNKWLMQKK   85 (340)
Q Consensus        76 ~~~~e~~~~g   85 (340)
                      ..++||++|-
T Consensus       117 g~I~efi~g~  126 (395)
T d1nw1a_         117 GRLEEYIPSR  126 (395)
T ss_dssp             EEEECCCCEE
T ss_pred             ceEEEEeccc
Confidence            2567777653

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.53  E-value=0.0031  Score=52.98  Aligned_cols=31  Identities=26%  Similarity=0.165  Sum_probs=27.6

Q ss_pred             CCceecCCCCCCcEEecCCCceEEeccccce
Q 019481          125 EKQVIYRDFKAPNILLDETFKCNLSDFSTAK  155 (340)
Q Consensus       125 ~~~iiHrDlKp~NILl~~~~~~kl~DFGla~  155 (340)
                      ..++||+|+.++||+++.+...-|.||+.|.
T Consensus       182 ~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         182 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             ccccccCCcchhhhhcccccceeEecccccc
Confidence            3679999999999999988777899999885