Your job contains 1 sequence.
>019483
METAGEWLEKALVDLCKRIESLDLDGEVISGLVSYCEFAQPLDAKEYLDNIIGQEVGKSV
IEEYLRRRGLTDICSSTTNVPTSKLQAYVKPRSDEGLASGTKKPSKTPKEFTGTGHQAEL
KKVMVPSYQVEPKKDAVSSHNENLAESSESRTMNRGNQSNNRKKKAGKVISLAEAAKGSI
VFQQGKPCSCQARQHRLISNCLSCGKIVCEQEGEGPCQFCGALVLKEGSTYAGLEEGFAP
LSDAEAAAEAYTKRLVDYDRNAAARTTVIDDQSDYYEIEGNSWLSKEEKELIKKKQEEVA
EAEQAKRNKVVVTFDLVGRKVSTFCRIATISSYIFSSVIV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019483
(340 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2079192 - symbol:AT3G47610 species:3702 "Arabi... 593 1.1e-57 1
UNIPROTKB|E1C1A8 - symbol:TRIP4 "Uncharacterized protein"... 211 7.3e-23 2
ZFIN|ZDB-GENE-040724-92 - symbol:trip4 "thyroid hormone r... 254 5.9e-21 1
UNIPROTKB|H0YL91 - symbol:TRIP4 "Activating signal cointe... 229 6.8e-19 1
UNIPROTKB|Q15650 - symbol:TRIP4 "Activating signal cointe... 229 3.2e-18 1
RGD|1306838 - symbol:Trip4 "thyroid hormone receptor inte... 227 1.8e-17 1
MGI|MGI:1928469 - symbol:Trip4 "thyroid hormone receptor ... 227 2.1e-17 1
UNIPROTKB|F6UYL9 - symbol:TRIP4 "Uncharacterized protein"... 224 9.0e-17 1
UNIPROTKB|F1N1K2 - symbol:TRIP4 "Uncharacterized protein"... 223 1.3e-16 1
UNIPROTKB|E2QU39 - symbol:TRIP4 "Uncharacterized protein"... 215 2.1e-15 1
DICTYBASE|DDB_G0269884 - symbol:DDB_G0269884 species:4468... 197 9.4e-13 2
FB|FBgn0031115 - symbol:CG11710 species:7227 "Drosophila ... 177 7.6e-11 1
UNIPROTKB|F1S0A8 - symbol:TRIP4 "Uncharacterized protein"... 175 1.5e-10 1
WB|WBGene00000208 - symbol:asc-1 species:6239 "Caenorhabd... 163 1.7e-09 2
POMBASE|SPAC1A6.01c - symbol:SPAC1A6.01c "human thyroid r... 136 5.5e-09 2
CGD|CAL0000832 - symbol:orf19.2391 species:5476 "Candida ... 127 2.2e-07 2
>TAIR|locus:2079192 [details] [associations]
symbol:AT3G47610 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=RCA] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR009349 Pfam:PF06221
GO:GO:0005634 EMBL:CP002686 GO:GO:0006355 GO:GO:0008270
EMBL:AL132955 EMBL:AY045958 EMBL:AY079317 IPI:IPI00547171
PIR:T45721 RefSeq:NP_190345.1 UniGene:At.526 UniGene:At.67277
STRING:Q9SN77 PRIDE:Q9SN77 EnsemblPlants:AT3G47610.1 GeneID:823915
KEGG:ath:AT3G47610 TAIR:At3g47610 HOGENOM:HOG000243137
InParanoid:Q9SN77 OMA:TGRVQHD PhylomeDB:Q9SN77
ProtClustDB:CLSN2683998 ArrayExpress:Q9SN77 Genevestigator:Q9SN77
Uniprot:Q9SN77
Length = 408
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 125/225 (55%), Positives = 146/225 (64%)
Query: 100 GTKKPSKTPKEFTGTGHQAELK-KVM--VPSYQVEPKKDAVSSHNENLAESSESRTMNRG 156
G K PS +G Q +K KV S +P K + N ++ +
Sbjct: 70 GYKDPSSHVAASSGPELQMYVKPKVDNGASSGTKKPFKTPKEGTSSN-QQAGTGKLTAPA 128
Query: 157 NQSNNRKKKAGKVISLAEAAKGSIVFQQGKPCSCQARQHRLISNCLSCGKIVCEQEGEGP 216
Q N +KKK GKVISLAEAAKGSIVFQQGKPC+CQAR+H L+SNCLSCGKIVCEQEGEGP
Sbjct: 129 QQVNPKKKKGGKVISLAEAAKGSIVFQQGKPCACQARRHHLVSNCLSCGKIVCEQEGEGP 188
Query: 217 CQFCGALVLKEGSTYAGLEEGFAPLSDXXXXXXXYTKRLVDYDRNAAARTTVIDDQSDYY 276
C FCGALVLKEGSTYAGLE G+ P+SD Y KRLV+YDRN+AARTTVIDDQSDYY
Sbjct: 189 CSFCGALVLKEGSTYAGLEVGYTPVSDADVAAEAYAKRLVEYDRNSAARTTVIDDQSDYY 248
Query: 277 EIEGNSWLSXXXXXXXXXXXXXXXXXXXXXRNKVVVTFDLVGRKV 321
E E ++WLS ++KVV+TFDL+GRKV
Sbjct: 249 ESESSTWLSAEEKELVRKKREEIEEAERVKKSKVVMTFDLIGRKV 293
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 95/197 (48%), Positives = 125/197 (63%)
Query: 1 META-GEWLEKALVDLCKRIES-LDLDGEVISGLVSYCEFAQPLDAKEYLDNIIGQEVGK 58
M TA G+WLE+ALVDLC++ E+ L+ D +VISGLVSYC+ AQP+DAKEYLDNIIG+E GK
Sbjct: 1 MGTAVGQWLEEALVDLCRKPETGLNFDRDVISGLVSYCDLAQPVDAKEYLDNIIGKE-GK 59
Query: 59 SVIEEYLRRRGLTDICSSTTNVPTSKLQAYVKPRSDEGLASGTKKPSKTPKEFTGTGHQA 118
S+I EYL+RRG D S +LQ YVKP+ D G +SGTKKP KTPKE T + QA
Sbjct: 60 SIIAEYLQRRGYKDPSSHVAASSGPELQMYVKPKVDNGASSGTKKPFKTPKEGTSSNQQA 119
Query: 119 ELKKVMVPSYQVEPKKDAVSSHNENLAESSE-SRTMNRGNQSNNRKKKAGKVISLAEAAK 177
K+ P+ QV PKK +LAE+++ S +G + ++ V + K
Sbjct: 120 GTGKLTAPAQQVNPKKKK-GGKVISLAEAAKGSIVFQQGKPCACQARRHHLVSNCLSCGK 178
Query: 178 GSIVFQQGK-PCS-CQA 192
+ Q+G+ PCS C A
Sbjct: 179 -IVCEQEGEGPCSFCGA 194
>UNIPROTKB|E1C1A8 [details] [associations]
symbol:TRIP4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=IEA] InterPro:IPR009349 Pfam:PF06221
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0008270
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR007374 Pfam:PF04266
SMART:SM01022 OMA:GQDKLAV GeneTree:ENSGT00390000005300
EMBL:AADN02051076 EMBL:AADN02051077 EMBL:AADN02051078
IPI:IPI00594812 Ensembl:ENSGALT00000003646 Uniprot:E1C1A8
Length = 581
Score = 211 (79.3 bits), Expect = 7.3e-23, Sum P(2) = 7.3e-23
Identities = 75/223 (33%), Positives = 110/223 (49%)
Query: 12 LVDLC-KRIES---LDLDGEVISGLVSYCEFAQPLDAKEYLDNII-GQEVGKS-VIEEYL 65
L+D C +R+ LD+ EV+ ++S + +EY+ +++ G E K +EE L
Sbjct: 7 LLDWCVRRLRGDFGLDVGEEVVRYILS---ITSEDEIREYVVDLLQGTEGRKGRFVEELL 63
Query: 66 RRRGLTDICSSTTNVPTSKLQAY-VKPRSDEGLASGTKKPSKTPKEFTGTGHQAELKKVM 124
R ++ P L AY K + E +G + +K K G Q E +
Sbjct: 64 SR------WQQSSQSPAEPLPAYRKKDETSESPRAGDQ--AKKGKR-KGRNKQ-ETPAYV 113
Query: 125 VPSYQVEPKKDAVSSHNENLAESSESRTMNRGNQSNNRKKKAGKVISL--AEAAKGSIVF 182
PS VE K + +LA++ ES T + S+N KK K +SL E V
Sbjct: 114 EPSTHVEEVKTPL-----DLAKAQESSTAS----SSNAYKKKTKYVSLYTKEGQDRLAVL 164
Query: 183 QQGK-PCSCQARQHRLISNCLSCGKIVCEQEGEGPCQFCGALV 224
G+ C C ++H+LI+NCL CG+IVCEQEG GPC FCG+LV
Sbjct: 165 IPGRHACECLGQKHKLINNCLVCGRIVCEQEGSGPCLFCGSLV 207
Score = 112 (44.5 bits), Expect = 7.3e-23, Sum P(2) = 7.3e-23
Identities = 35/136 (25%), Positives = 56/136 (41%)
Query: 201 CLSCGKIVCEQEGEGPCQFCG---ALVLKE---GSTYAG----LEEGFAP-----LSDXX 245
CL CG +VC +E + Q +LK+ G+ +G + + P L
Sbjct: 200 CLFCGSLVCTKEEQDILQRDSNKSQKLLKKLMAGAESSGNLDAISKDLLPRQEARLKAGL 259
Query: 246 XXXXXYTKRLVDYDRNAAARTTVIDDQSDYYEIEGNSWLSXXXXXXXXXXXXXXXXXXXX 305
+ +L+++DR + RT VIDD+SDY+ + N WLS
Sbjct: 260 EMAVKHKDKLLEFDRTSVRRTQVIDDESDYFATDSNQWLSKQEREALQKREQELQELRHA 319
Query: 306 XRNKVVVTFDLVGRKV 321
R +T D GR++
Sbjct: 320 SRLAKKITIDFAGRQI 335
>ZFIN|ZDB-GENE-040724-92 [details] [associations]
symbol:trip4 "thyroid hormone receptor interactor 4"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR009349 Pfam:PF06221 ZFIN:ZDB-GENE-040724-92
GO:GO:0005634 GO:GO:0006355 GO:GO:0008270 InterPro:IPR015947
SUPFAM:SSF88697 InterPro:IPR007374 Pfam:PF04266 SMART:SM01022
eggNOG:NOG248556 HOGENOM:HOG000006873 HOVERGEN:HBG061618
OrthoDB:EOG4F4S9V EMBL:BC124323 IPI:IPI00498986 UniGene:Dr.87177
ProteinModelPortal:Q08CA0 SMR:Q08CA0 InParanoid:Q08CA0
Uniprot:Q08CA0
Length = 564
Score = 254 (94.5 bits), Expect = 5.9e-21, P = 5.9e-21
Identities = 90/334 (26%), Positives = 145/334 (43%)
Query: 13 VDLCKRIESLDLDGEVISGLVSYCEFAQPLDAKEYLDNII-GQEVGKS-VIEEYLRRRGL 70
VD K LD +++ ++S + A + EY+ +++ G E K ++E ++R
Sbjct: 10 VDKLKHGFGLDASDDIVQYILSI-DNADEI--VEYVGDLLQGTEGNKQEFVDELVQR--- 63
Query: 71 TDICSSTTNVPTSKLQAYVKPRSDEGLASGTKKPSKTPKEFTGTGHQAELKKVMVPSYQV 130
C + T+ L + R + + P T K+ G K+ +V Q
Sbjct: 64 WQRCQTQTS---DGLGGVL--RKEAVMEELDTAPKDTQKKSKRKGRN---KQEIVTVSQA 115
Query: 131 EPKKDAVSSHNENLAESSESRTMNRGNQSNNRKKKAGKVISLAEAAKGSIVFQQGKPCSC 190
EP+ ESS S ++ + ++ N K GK K +++ + C C
Sbjct: 116 EPEPVRTPIDLMKAQESSNSSSVKKKSKFVNLYAKEGK-------DKLAVLLPGRQACEC 168
Query: 191 QARQHRLISNCLSCGKIVCEQEGEGPCQFCGALV--------LKEGSTYA---------- 232
A++HRLI+NCLSCG+IVCEQEG GPC FCG+LV L+ S +
Sbjct: 169 LAQKHRLINNCLSCGRIVCEQEGSGPCLFCGSLVCTNEEQEILQRDSNKSQKLRKKLMGE 228
Query: 233 GLEEGFAPLSDXXXXXXX-----YTKRLVDYDRNAAARTTVIDDQSDYYEIEGNSWLSXX 287
G E + P + + +L+++D+N+ RT V+DD+SDY+ + N WLS
Sbjct: 229 GTEREYLPHQESKMKAGLEKAVKHKDKLLEFDKNSVKRTQVLDDESDYFATDSNQWLSPG 288
Query: 288 XXXXXXXXXXXXXXXXXXXRNKVVVTFDLVGRKV 321
R +T D GR+V
Sbjct: 289 EREALRKREEELRELRHASRKDRKITLDFAGRRV 322
>UNIPROTKB|H0YL91 [details] [associations]
symbol:TRIP4 "Activating signal cointegrator 1"
species:9606 "Homo sapiens" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR009349 Pfam:PF06221 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0008270 EMBL:AC087632
HGNC:HGNC:12310 EMBL:AC091231 Ensembl:ENST00000560567 Bgee:H0YL91
Uniprot:H0YL91
Length = 368
Score = 229 (85.7 bits), Expect = 6.8e-19, P = 6.8e-19
Identities = 94/358 (26%), Positives = 149/358 (41%)
Query: 1 METAGEWLEKALVDLC----KRIESLDLDGEVISGLVSYCEFAQPLDAKEYLDNIIGQEV 56
M AG + LV C ++ LD+ E+I ++S E A+ + +EY+ +++
Sbjct: 1 MAVAGAVSGEPLVHWCTQQLRKTFGLDVSEEIIQYVLSI-ESAEEI--REYVTDLLQGNE 57
Query: 57 GKS--VIEEYLRRRGLTDICSSTTNVPTSKLQAYVKPRSDEGLASGTKKPSKTPKEFTGT 114
GK IEE + + D + + LQ K DE + G K +
Sbjct: 58 GKKGQFIEELITKWQKND-----QELISDPLQQCFK--KDE-ILDGQKSGDHLKR----- 104
Query: 115 GHQAELKKVMVPSYQVEPKKDAVSSHNENLAESSESRTMNRGNQSNNRKKKAGKVISLAE 174
G + + VP++ EP A +LA++ E+ + S +K K + +
Sbjct: 105 GRKKGRNRQEVPAF-TEPDTTAEVKTPFDLAKAQEN------SNSVKKKTKFVNLYTREG 157
Query: 175 AAKGSIVFQQGKPCSCQARQHRLISNCLSCGKIVCEQEGEGPCQFCGALV--------LK 226
+ +++ PC C ++H+LI+NCL CG+IVCEQEG GPC FCG LV L+
Sbjct: 158 QDRLAVLLPGRHPCDCLGQKHKLINNCLICGRIVCEQEGSGPCLFCGTLVCTHEEQDILQ 217
Query: 227 EGST---------YAGLEEG---------FAP-----LSDXXXXXXXYTKRLVDYDRNAA 263
S +G+E P + + +L+++DR +
Sbjct: 218 RDSNKSQKLLKKLMSGVENSGKVDISTKDLLPHQELRIKSGLEKAIKHKDKLLEFDRTSI 277
Query: 264 ARTTVIDDQSDYYEIEGNSWLSXXXXXXXXXXXXXXXXXXXXXRNKVVVTFDLVGRKV 321
RT VIDD+SDY+ + N WLS R VT D GRK+
Sbjct: 278 RRTQVIDDESDYFASDSNQWLSKLERETLQKREEELRELRHASRLSKKVTIDFAGRKI 335
>UNIPROTKB|Q15650 [details] [associations]
symbol:TRIP4 "Activating signal cointegrator 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0016922 "ligand-dependent nuclear
receptor binding" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR009349
Pfam:PF06221 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0008270 GO:GO:0005815 GO:GO:0003713
GO:GO:0006366 EMBL:CH471082 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0016922 InterPro:IPR007374 Pfam:PF04266 SMART:SM01022
EMBL:AF168418 EMBL:AK314319 EMBL:BC012448 EMBL:L40371
IPI:IPI00018840 RefSeq:NP_057297.2 UniGene:Hs.500340 PDB:2E5O
PDBsum:2E5O ProteinModelPortal:Q15650 SMR:Q15650 IntAct:Q15650
STRING:Q15650 PhosphoSite:Q15650 DMDM:116242828 PaxDb:Q15650
PeptideAtlas:Q15650 PRIDE:Q15650 DNASU:9325 Ensembl:ENST00000261884
GeneID:9325 KEGG:hsa:9325 UCSC:uc002anm.3 CTD:9325
GeneCards:GC15P064683 HGNC:HGNC:12310 HPA:HPA016605 MIM:604501
neXtProt:NX_Q15650 PharmGKB:PA36988 eggNOG:NOG248556
HOGENOM:HOG000006873 HOVERGEN:HBG061618 InParanoid:Q15650
OMA:GQDKLAV OrthoDB:EOG4F4S9V PhylomeDB:Q15650
EvolutionaryTrace:Q15650 GenomeRNAi:9325 NextBio:34931 Bgee:Q15650
CleanEx:HS_TRIP4 Genevestigator:Q15650 GermOnline:ENSG00000103671
Uniprot:Q15650
Length = 581
Score = 229 (85.7 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 94/358 (26%), Positives = 149/358 (41%)
Query: 1 METAGEWLEKALVDLC----KRIESLDLDGEVISGLVSYCEFAQPLDAKEYLDNIIGQEV 56
M AG + LV C ++ LD+ E+I ++S E A+ + +EY+ +++
Sbjct: 1 MAVAGAVSGEPLVHWCTQQLRKTFGLDVSEEIIQYVLSI-ESAEEI--REYVTDLLQGNE 57
Query: 57 GKS--VIEEYLRRRGLTDICSSTTNVPTSKLQAYVKPRSDEGLASGTKKPSKTPKEFTGT 114
GK IEE + + D + + LQ K DE + G K +
Sbjct: 58 GKKGQFIEELITKWQKND-----QELISDPLQQCFK--KDE-ILDGQKSGDHLKR----- 104
Query: 115 GHQAELKKVMVPSYQVEPKKDAVSSHNENLAESSESRTMNRGNQSNNRKKKAGKVISLAE 174
G + + VP++ EP A +LA++ E+ + S +K K + +
Sbjct: 105 GRKKGRNRQEVPAF-TEPDTTAEVKTPFDLAKAQEN------SNSVKKKTKFVNLYTREG 157
Query: 175 AAKGSIVFQQGKPCSCQARQHRLISNCLSCGKIVCEQEGEGPCQFCGALV--------LK 226
+ +++ PC C ++H+LI+NCL CG+IVCEQEG GPC FCG LV L+
Sbjct: 158 QDRLAVLLPGRHPCDCLGQKHKLINNCLICGRIVCEQEGSGPCLFCGTLVCTHEEQDILQ 217
Query: 227 EGST---------YAGLEEG---------FAP-----LSDXXXXXXXYTKRLVDYDRNAA 263
S +G+E P + + +L+++DR +
Sbjct: 218 RDSNKSQKLLKKLMSGVENSGKVDISTKDLLPHQELRIKSGLEKAIKHKDKLLEFDRTSI 277
Query: 264 ARTTVIDDQSDYYEIEGNSWLSXXXXXXXXXXXXXXXXXXXXXRNKVVVTFDLVGRKV 321
RT VIDD+SDY+ + N WLS R VT D GRK+
Sbjct: 278 RRTQVIDDESDYFASDSNQWLSKLERETLQKREEELRELRHASRLSKKVTIDFAGRKI 335
>RGD|1306838 [details] [associations]
symbol:Trip4 "thyroid hormone receptor interactor 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR009349
Pfam:PF06221 RGD:1306838 GO:GO:0005634 GO:GO:0006355 GO:GO:0008270
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR007374 Pfam:PF04266
SMART:SM01022 IPI:IPI00948737 Ensembl:ENSRNOT00000065017
UCSC:RGD:1306838 ArrayExpress:D3ZEX0 Uniprot:D3ZEX0
Length = 539
Score = 227 (85.0 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 98/359 (27%), Positives = 151/359 (42%)
Query: 1 METAGEWLEKALVDLC----KRIESLDLDGEVISGLVSYCEFAQPLDAKEYLDNIIGQEV 56
M AG + LV C ++ +LD+ E+I ++S E A+ + ++Y+ +++
Sbjct: 1 MAVAGAASGEPLVHWCTQQLRKTFALDVSEEIIQYVLSI-ESAEEI--RDYVTDLLQGNE 57
Query: 57 GKS--VIEEYLRRRGLTDI-CSSTTNVPTSKLQAYVKPRSDEGLASGTKKPSKTPKEFTG 113
GK IE+ + + D C S S Q + K S +G S + K G
Sbjct: 58 GKKGQFIEDLITKWQKKDQECISD-----SFQQCWKKDESLDGQRSVDQLKRSRRK---G 109
Query: 114 TGHQAELKKVMVPSYQVEPKKDAVSSHNENLAESSESRTMNRGNQSNNRKKKAGKVISLA 173
Q E+ P VE K +LA++ E GN S +K + + +
Sbjct: 110 RNKQ-EVPAFPEPDVTVEVKTPL------DLAKAQE------GNSSVKKKTRFVSLYTRE 156
Query: 174 EAAKGSIVFQQGKPCSCQARQHRLISNCLSCGKIVCEQEGEGPCQFCGALV--------L 225
K +++ PC C ++H+LI+NCL CG+IVCEQEG GPC FCG+LV L
Sbjct: 157 GQDKLAVLLPGRHPCDCLGQKHKLINNCLVCGRIVCEQEGSGPCLFCGSLVCTNEEQDIL 216
Query: 226 KEGST---------YAGLEE-GFAPLS-------------DXXXXXXXYTKRLVDYDRNA 262
+ S +G E G +S + ++L+++DR +
Sbjct: 217 QRDSNKSQKLLKKLMSGAENSGKVDISTKDHPPHQESRMKSGLEKAVKHKEKLLEFDRTS 276
Query: 263 AARTTVIDDQSDYYEIEGNSWLSXXXXXXXXXXXXXXXXXXXXXRNKVVVTFDLVGRKV 321
RT VIDD+SDY+ + N WLS R VT D GRK+
Sbjct: 277 IRRTQVIDDESDYFASDSNQWLSKVERDMLQKREEELRELRHASRLSKKVTIDFAGRKI 335
>MGI|MGI:1928469 [details] [associations]
symbol:Trip4 "thyroid hormone receptor interactor 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016922 "ligand-dependent nuclear receptor binding"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR009349 Pfam:PF06221 MGI:MGI:1928469 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0005815 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR007374 Pfam:PF04266 SMART:SM01022 EMBL:AC151906
CTD:9325 eggNOG:NOG248556 HOGENOM:HOG000006873 HOVERGEN:HBG061618
OMA:GQDKLAV OrthoDB:EOG4F4S9V EMBL:AF197574 EMBL:AF539614
EMBL:AK039024 EMBL:BC021316 IPI:IPI00135240 IPI:IPI01007801
RefSeq:NP_001164378.1 RefSeq:NP_062771.2 UniGene:Mm.208379
ProteinModelPortal:Q9QXN3 SMR:Q9QXN3 PhosphoSite:Q9QXN3
PRIDE:Q9QXN3 Ensembl:ENSMUST00000117083 Ensembl:ENSMUST00000119245
Ensembl:ENSMUST00000122410 Ensembl:ENSMUST00000179395 GeneID:56404
KEGG:mmu:56404 UCSC:uc009qdz.2 UCSC:uc012gvn.1
GeneTree:ENSGT00390000005300 InParanoid:Q9QXN3 ChiTaRS:TRIP4
NextBio:312526 Bgee:Q9QXN3 CleanEx:MM_TRIP4 Genevestigator:Q9QXN3
GermOnline:ENSMUSG00000032386 Uniprot:Q9QXN3
Length = 581
Score = 227 (85.0 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 92/358 (25%), Positives = 153/358 (42%)
Query: 1 METAGEWLEKALVDLC-KRIE---SLDLDGEVISGLVSYCEFAQPLDAKEYLDNIIGQEV 56
M AG + LV C ++++ +LD+ E+I ++S E A+ + +EY+ +++
Sbjct: 1 MAVAGAAYREPLVHWCTQQLQKTFALDVSEEIIQYVLSI-ENAEEI--REYVTDLLQGNE 57
Query: 57 GKS--VIEEYLRRRGLTDICSSTTNVPTSKLQAYVKPRSDEGLASGTKKPSKTPKEFTGT 114
GK IE+ + + D + Q + R DE + G + + +
Sbjct: 58 GKKGQFIEDLITKWQKND-----QEFISDSFQQCL--RKDE-ILDGQRSVDQLKRSRRKG 109
Query: 115 GHQAELKKVMVPSYQVEPKKDAVSSHNENLAESSESRTMNRGNQSNNRKKKAGKVISLAE 174
++ E+ P VE K +LA++ ES N S +K + + +
Sbjct: 110 RNKQEVPAFPEPDVAVEVKTPL------DLAKAQES------NNSVKKKTRFVNLYTREG 157
Query: 175 AAKGSIVFQQGKPCSCQARQHRLISNCLSCGKIVCEQEGEGPCQFCGALV---------- 224
K +++ PC C ++H+LI+NCL CG+IVCEQEG GPC FCG+LV
Sbjct: 158 QDKLAVLLPGRHPCDCLGQKHKLINNCLVCGRIVCEQEGSGPCLFCGSLVCTNEEQDILQ 217
Query: 225 ---------LKE---GSTYAG---------LEEGFAPLSDXXXXXXXYTKRLVDYDRNAA 263
LK+ G+ +G L + + + ++L+++DR +
Sbjct: 218 RDSNKSQKLLKKLMSGAETSGKVDVSTKDLLPHQESRMKSGLEKAIKHKEKLLEFDRTSI 277
Query: 264 ARTTVIDDQSDYYEIEGNSWLSXXXXXXXXXXXXXXXXXXXXXRNKVVVTFDLVGRKV 321
RT VIDD+SDY+ + N WLS R VT D GRK+
Sbjct: 278 RRTQVIDDESDYFASDSNQWLSKVEREMLQKREEELRELRHASRLSKKVTIDFAGRKI 335
>UNIPROTKB|F6UYL9 [details] [associations]
symbol:TRIP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR009349 Pfam:PF06221 GO:GO:0005634 GO:GO:0006355
GO:GO:0008270 InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR007374
Pfam:PF04266 SMART:SM01022 CTD:9325 OMA:GQDKLAV
GeneTree:ENSGT00390000005300 Ensembl:ENSCAFT00000027071
EMBL:AAEX03016207 EMBL:AAEX03016206 RefSeq:XP_535513.2
GeneID:478340 KEGG:cfa:478340 Uniprot:F6UYL9
Length = 581
Score = 224 (83.9 bits), Expect = 9.0e-17, P = 9.0e-17
Identities = 93/358 (25%), Positives = 150/358 (41%)
Query: 1 METAGEWLEKALVDLC----KRIESLDLDGEVISGLVSYCEFAQPLDAKEYLDNII-GQE 55
M AG + LV C ++ LD+ E++ ++S E A+ + +EY+ +++ G E
Sbjct: 1 MAVAGAASREQLVGWCTQELRKTFGLDVSEEIMQYVLSI-ESAEEI--REYVTDLLQGNE 57
Query: 56 VGKS-VIEEYLRRRGLTDICSSTTNVPTSKLQAYVKPRSDEGLASGTKKPSKTPKEFTGT 114
K IEE + + D S+ +P Q++ K +G SG + K G
Sbjct: 58 DKKGQFIEELITKWQKNDQELSSDALP----QSFKKDEMLDGQRSGDQLKRSRRK---GR 110
Query: 115 GHQAELKKVMVPSYQVEPKKDAVSSHNENLAESSESRTMNRGNQSNNRKKKAGKVISLAE 174
Q VP++ EP +LA++ E+ + S +K K + +
Sbjct: 111 NRQE------VPAF-AEPDTTKEVKTPFDLAKAQEN------SNSLKKKTKFVSLYTKEG 157
Query: 175 AAKGSIVFQQGKPCSCQARQHRLISNCLSCGKIVCEQEGEGPCQFCGALV--------LK 226
+ +++ PC C ++H+LI+NCL CG+IVCEQEG GPC FCG LV L+
Sbjct: 158 QDRLAVLIPGRHPCDCLGQKHKLINNCLICGRIVCEQEGSGPCFFCGTLVCTREEQDILQ 217
Query: 227 EGST---------YAGLEEG---------FAP-----LSDXXXXXXXYTKRLVDYDRNAA 263
S +G E P + + +L+++DR +
Sbjct: 218 RDSNKSQKLLKKLMSGTENSGKVDISTKDLLPHQELRIKSGLEKAIKHKDKLLEFDRTSI 277
Query: 264 ARTTVIDDQSDYYEIEGNSWLSXXXXXXXXXXXXXXXXXXXXXRNKVVVTFDLVGRKV 321
RT VIDD++DY+ + N WLS R +T D GRK+
Sbjct: 278 RRTQVIDDEADYFASDSNQWLSKIERETLQKREEELREFRHMSRLSKKITIDFAGRKI 335
>UNIPROTKB|F1N1K2 [details] [associations]
symbol:TRIP4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016922 "ligand-dependent nuclear receptor binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR009349 Pfam:PF06221
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0008270
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR007374 Pfam:PF04266
SMART:SM01022 OMA:GQDKLAV GeneTree:ENSGT00390000005300
EMBL:DAAA02028734 IPI:IPI00708341 UniGene:Bt.58152
Ensembl:ENSBTAT00000019269 Uniprot:F1N1K2
Length = 579
Score = 223 (83.6 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 94/358 (26%), Positives = 148/358 (41%)
Query: 1 METAGEWLEKALVDLC----KRIESLDLDGEVISGLVSYCEFAQPLDAKEYLDNIIGQEV 56
M AG + LV C ++ LD+ E+I ++S E A+ + +EY+ +++
Sbjct: 1 MAVAGAASREQLVGWCTEQLRKSFGLDVSEEIIQYVLSI-ESAEEI--REYVTDLLQGNE 57
Query: 57 GKS--VIEEYLRRRGLTDICSSTTNVPTSKLQAYVKPRSDEGLASGTKKPSKTPKEFTGT 114
GK IEE + + D + + LQ K D+G SG + K G
Sbjct: 58 GKKGQFIEELVTKWQKND-----QELTSDALQQSFK--KDDGQRSGDQLKRSRRK---GR 107
Query: 115 GHQAELKKVMVPSYQVEPKKDAVSSHNENLAESSESRTMNRGNQSNNRKKKAGKVISLAE 174
Q P++ EP +LA++ ++ + S +K K + +
Sbjct: 108 NKQE------APAF-TEPDTTTEVKTPFDLAKAQDN------SSSLKKKTKFVSLYTKEG 154
Query: 175 AAKGSIVFQQGKPCSCQARQHRLISNCLSCGKIVCEQEGEGPCQFCGALV--------LK 226
K +++ PC C ++H+LI+NCL CG+IVCEQEG GPC FCG+LV L+
Sbjct: 155 QDKLAVLIPGRHPCDCLGQKHKLINNCLVCGRIVCEQEGSGPCLFCGSLVCTHEERDILQ 214
Query: 227 EGST---------YAGLEE-GFAPLS-------------DXXXXXXXYTKRLVDYDRNAA 263
S +G E G +S + +L+++DR +
Sbjct: 215 RDSNKSQKLLKKLMSGTENSGKVDISTKDLLPHQELRFKSGLEKAIKHKDKLLEFDRTSI 274
Query: 264 ARTTVIDDQSDYYEIEGNSWLSXXXXXXXXXXXXXXXXXXXXXRNKVVVTFDLVGRKV 321
RT VIDD+SDY+ + N WLS R +T D GRK+
Sbjct: 275 RRTQVIDDESDYFASDSNQWLSKIEREAIQKREEELREFRHASRLSKKITIDFAGRKI 332
>UNIPROTKB|E2QU39 [details] [associations]
symbol:TRIP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR009349 Pfam:PF06221 GO:GO:0005634 GO:GO:0006355
GO:GO:0008270 InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR007374
Pfam:PF04266 SMART:SM01022 Ensembl:ENSCAFT00000027071
Uniprot:E2QU39
Length = 584
Score = 215 (80.7 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 93/360 (25%), Positives = 148/360 (41%)
Query: 1 METAGEWLEKALVDLC----KRIESLDLDGEVIS--GLVSYCEFAQPLDAKEYLDNII-G 53
M AG + LV C ++ LD+ E++ V E A+ + +EY+ +++ G
Sbjct: 1 MAVAGAASREQLVGWCTQELRKTFGLDVSEEIMHFPRYVLSIESAEEI--REYVTDLLQG 58
Query: 54 QEVGKS-VIEEYLRRRGLTDICSSTTNVPTSKLQAYVKPRSDEGLASGTKKPSKTPKEFT 112
E K IEE + + D S+ +P Q++ K +G SG + K
Sbjct: 59 NEDKKGQFIEELITKWQKNDQELSSDALP----QSFKKDEMLDGQRSGDQLKRSRRK--- 111
Query: 113 GTGHQAELKKVMVPSYQVEPKKDAVSSHNENLAESSESRTMNRGNQSNNRKKKAGKVISL 172
G Q VP++ EP +LA++ E+ + S +K K + +
Sbjct: 112 GRNRQE------VPAF-AEPDTTKEVKTPFDLAKAQEN------SNSLKKKTKFVSLYTK 158
Query: 173 AEAAKGSIVFQQGKPCSCQARQHRLISNCLSCGKIVCEQEGEGPCQFCGALV-------- 224
+ +++ PC C ++H+LI+NCL CG+IVCEQEG GPC FCG LV
Sbjct: 159 EGQDRLAVLIPGRHPCDCLGQKHKLINNCLICGRIVCEQEGSGPCFFCGTLVCTREEQDI 218
Query: 225 LKEGST---------YAGLEEG---------FAP-----LSDXXXXXXXYTKRLVDYDRN 261
L+ S +G E P + + +L+++DR
Sbjct: 219 LQRDSNKSQKLLKKLMSGTENSGKVDISTKDLLPHQELRIKSGLEKAIKHKDKLLEFDRT 278
Query: 262 AAARTTVIDDQSDYYEIEGNSWLSXXXXXXXXXXXXXXXXXXXXXRNKVVVTFDLVGRKV 321
+ RT VIDD++DY+ + N WLS R +T D GRK+
Sbjct: 279 SIRRTQVIDDEADYFASDSNQWLSKIERETLQKREEELREFRHMSRLSKKITIDFAGRKI 338
>DICTYBASE|DDB_G0269884 [details] [associations]
symbol:DDB_G0269884 species:44689 "Dictyostelium
discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR009349 Pfam:PF06221 dictyBase:DDB_G0269884
GO:GO:0005634 EMBL:AAFI02000005 GO:GO:0006355 GO:GO:0008270
eggNOG:NOG248556 RefSeq:XP_646378.1 EnsemblProtists:DDB0190646
GeneID:8617333 KEGG:ddi:DDB_G0269884 InParanoid:Q55CV3 OMA:NTHAKRT
Uniprot:Q55CV3
Length = 843
Score = 197 (74.4 bits), Expect = 9.4e-13, Sum P(2) = 9.4e-13
Identities = 41/146 (28%), Positives = 64/146 (43%)
Query: 180 IVFQQGKPCSCQARQHRLISNCLSCGKIVCEQEG--EGPCQFCGALVLKEGSTYAGLEEG 237
I + G+PC CQA +H+L++NCL+CGKI+CEQ+ C FC + + ++
Sbjct: 141 IEMKPGEPCDCQATRHKLLTNCLNCGKIMCEQDAGLSKKCSFCSTPLFTNPINLSTQQQQ 200
Query: 238 FAPLSDXXXXXXXYTKRLVDYDRNAAARTTVIDDQSDYYEIEGNSWLSXXXXXXXXXXXX 297
+ Y R++ Y A RT V DDQ DY+ N WL+
Sbjct: 201 L--VEKNLTNAVEYKDRILGYQNTHAKRTMVYDDQEDYFSNSTNKWLTEEERKKVLQQEQ 258
Query: 298 XXXXXXXXXRNKVVVTFDLVGRKVST 323
+ ++ D GR++ T
Sbjct: 259 EFKQKQEDYKKTTRISIDFQGRRIIT 284
Score = 39 (18.8 bits), Expect = 9.4e-13, Sum P(2) = 9.4e-13
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 156 GNQSNNRKKKAGKVISLAEAAKGSI 180
GN ++N K K +S E K +I
Sbjct: 8 GNNNSNNNKNNDKPMSYEEIEKWTI 32
>FB|FBgn0031115 [details] [associations]
symbol:CG11710 species:7227 "Drosophila melanogaster"
[GO:0016922 "ligand-dependent nuclear receptor binding"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR009349
Pfam:PF06221 GO:GO:0005634 GO:GO:0006355 EMBL:AE014298
GO:GO:0008270 InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR007374
Pfam:PF04266 SMART:SM01022 OMA:GQDKLAV GeneTree:ENSGT00390000005300
UniGene:Dm.5640 GeneID:33044 KEGG:dme:Dmel_CG11710
FlyBase:FBgn0031115 ChiTaRS:CG11710 GenomeRNAi:33044 NextBio:781664
RefSeq:NP_608393.1 ProteinModelPortal:Q9VRA1 SMR:Q9VRA1
PRIDE:Q9VRA1 EnsemblMetazoa:FBtr0089642 UCSC:CG11710-RB
InParanoid:Q9VRA1 PhylomeDB:Q9VRA1 ArrayExpress:Q9VRA1 Bgee:Q9VRA1
Uniprot:Q9VRA1
Length = 513
Score = 177 (67.4 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 34/69 (49%), Positives = 45/69 (65%)
Query: 157 NQSNNRKKKAGKVISLAEA---AKGSIVFQQGKP-CSCQARQHRLISNCLSCGKIVCEQE 212
N S K K+GK ++L + +G + +G+ C CQA QH+LI+NCL CG+IVCEQE
Sbjct: 88 NISKGAKGKSGKHVNLYASDGRVQGDTIILKGRRHCDCQAGQHKLINNCLGCGRIVCEQE 147
Query: 213 GEGPCQFCG 221
G GPC CG
Sbjct: 148 GSGPCLSCG 156
Score = 117 (46.2 bits), Expect = 0.00048, P = 0.00048
Identities = 35/125 (28%), Positives = 52/125 (41%)
Query: 201 CLSCGKIVCEQEGEGPCQFCGALVLKEGSTYAGLEEGFAPLSDXXXXXX----XYTKRLV 256
CLSCG V E E Q ++G T + ++G + RL+
Sbjct: 152 CLSCGDPVRTPEEE---QQLAKAAREKGGTKSAAKQGKKSTKELSTQALDKALAQRDRLL 208
Query: 257 DYDRNAAARTTVIDDQSDYYEIEGNSWLSXXXXXXXXXXXXXXXXXXXXXRNKVVVTFDL 316
+YD+N+ RTTVIDD+ DY++ E + WLS R K + D
Sbjct: 209 EYDKNSEKRTTVIDDELDYFQ-ENSVWLSDAEREKFEKLHREMEEVKHGSRMKRKIRVDF 267
Query: 317 VGRKV 321
GR++
Sbjct: 268 AGREL 272
>UNIPROTKB|F1S0A8 [details] [associations]
symbol:TRIP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016922 "ligand-dependent nuclear receptor binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR009349 Pfam:PF06221
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0008270
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR007374 Pfam:PF04266
SMART:SM01022 OMA:GQDKLAV GeneTree:ENSGT00390000005300
EMBL:CU499013 EMBL:CU571342 Ensembl:ENSSSCT00000005028
Uniprot:F1S0A8
Length = 550
Score = 175 (66.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 33/73 (45%), Positives = 46/73 (63%)
Query: 155 RGNQSNNRKKKAGKVISL--AEAAKGSIVFQQGK-PCSCQARQHRLISNCLSCGKIVCEQ 211
+ ++++ KK K +SL E V G+ PC C ++H+LI+NCL CG+IVCEQ
Sbjct: 104 KAQENSSSLKKKTKFVSLYTKEGQDKLAVLIPGRHPCDCLGQKHKLINNCLICGRIVCEQ 163
Query: 212 EGEGPCQFCGALV 224
EG GPC FCG L+
Sbjct: 164 EGSGPCLFCGTLI 176
>WB|WBGene00000208 [details] [associations]
symbol:asc-1 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0040024 "dauer larval development"
evidence=IDA] [GO:0001071 "nucleic acid binding transcription
factor activity" evidence=ISS] InterPro:IPR009349 Pfam:PF06221
GO:GO:0005634 GO:GO:0006355 GO:GO:0008270 GO:GO:0040024
EMBL:AL132949 GeneTree:ENSGT00390000005300 EMBL:AF197575
RefSeq:NP_497100.1 UniGene:Cel.19606 ProteinModelPortal:G5EDK1
SMR:G5EDK1 EnsemblMetazoa:Y53F4B.15 GeneID:175159
KEGG:cel:CELE_Y53F4B.15 CTD:175159 WormBase:Y53F4B.15 OMA:VCTREER
NextBio:887000 Uniprot:G5EDK1
Length = 425
Score = 163 (62.4 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 33/55 (60%), Positives = 38/55 (69%)
Query: 175 AAKGSIVF----QQGK-PCSCQARQHRLISNCLSCGKIVCEQEGEGPCQFCGALV 224
AAK I F ++G+ C CQAR H+LI NCL CG+IVCEQEG GPC CG LV
Sbjct: 20 AAKTEISFADTLRKGRHECLCQARTHKLILNCLGCGRIVCEQEGSGPCFTCGTLV 74
Score = 39 (18.8 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 311 VVTFDLVGRKVSTFCRIATISSYIF 335
V+ F VST I+T SYI+
Sbjct: 388 VLCFSAFEPLVSTIPHISTADSYIY 412
>POMBASE|SPAC1A6.01c [details] [associations]
symbol:SPAC1A6.01c "human thyroid receptor interacting
protein homolog, transcription coactivator (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003713 "transcription
coactivator activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0008270 "zinc
ion binding" evidence=ISM] InterPro:IPR009349 Pfam:PF06221
PomBase:SPAC1A6.01c GO:GO:0005829 GO:GO:0005634 EMBL:CU329670
GO:GO:0008270 GO:GO:0006357 GO:GO:0003713 eggNOG:NOG248556
PIR:T38275 RefSeq:NP_593192.1 EnsemblFungi:SPAC1A6.01c.1
GeneID:2542431 KEGG:spo:SPAC1A6.01c OMA:MHGASTA OrthoDB:EOG4PCF2F
NextBio:20803488 Uniprot:O13855
Length = 455
Score = 136 (52.9 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 32/94 (34%), Positives = 50/94 (53%)
Query: 149 ESRTMNRGNQSNNRKKKAG---KVISLAEAAKGSIVFQQGKPCSCQARQHRL---ISNCL 202
E +++ N S+NR + K I E ++ +I + + C+CQ R+H L NCL
Sbjct: 154 EKKSVKHNNSSSNRIEGLADIEKAIRQIEISQ-NINKAERRVCNCQGRKHPLNEAAPNCL 212
Query: 203 SCGKIVCEQEGEGPCQFCGALVLKEGSTYAGLEE 236
+CGKI+C EG GPC FC V+ + ++E
Sbjct: 213 NCGKIICIVEGIGPCTFCDNPVISKAQQLELIQE 246
Score = 66 (28.3 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 17/69 (24%), Positives = 32/69 (46%)
Query: 255 LVDYDRNAAARTTVIDDQSDY--YEIEGNSWLSXXXXXXXXXXXXXXXXXXXXXRNKVVV 312
L+++DR +A RT +ID+ +D+ + ++W S + KV+
Sbjct: 305 LLNFDRTSAQRTRIIDEAADFDPTSLASDTWASPAEKALNLVRMQKAMAKKEKKKKKVL- 363
Query: 313 TFDLVGRKV 321
+ L G+KV
Sbjct: 364 SISLSGKKV 372
>CGD|CAL0000832 [details] [associations]
symbol:orf19.2391 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR009349 Pfam:PF06221
CGD:CAL0000832 GO:GO:0005634 GO:GO:0006355 GO:GO:0008270
EMBL:AACQ01000131 EMBL:AACQ01000130 eggNOG:NOG248556
RefSeq:XP_713224.1 RefSeq:XP_713275.1 GeneID:3645077 GeneID:3645095
KEGG:cal:CaO19.2391 KEGG:cal:CaO19.9927 Uniprot:Q59UH3
Length = 357
Score = 127 (49.8 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 188 CSCQARQHRLIS---NCLSCGKIVCEQEGEGPCQFCGALVL 225
C+C AR+H L NCL+CGKI+C +EG PC FCG+ ++
Sbjct: 60 CNCMARRHPLFEFAPNCLNCGKIICTKEGLQPCSFCGSDII 100
Score = 57 (25.1 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 255 LVDYDRNAAARTTVIDDQSDYYEIEGNS-WLS 285
L+DY RT +ID+ SD+ E+ S WL+
Sbjct: 197 LLDYQATGEERTKIIDNASDF-EMPSQSLWLT 227
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.130 0.373 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 340 312 0.00080 116 3 11 23 0.45 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 610 (65 KB)
Total size of DFA: 215 KB (2119 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.63u 0.06s 30.69t Elapsed: 00:00:01
Total cpu time: 30.64u 0.06s 30.70t Elapsed: 00:00:01
Start: Tue May 21 07:18:46 2013 End: Tue May 21 07:18:47 2013