Query 019486
Match_columns 340
No_of_seqs 434 out of 2802
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 16:50:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019486.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019486hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dn9_A DNAJ homolog subfamily 99.8 1.9E-20 6.6E-25 144.2 8.0 71 66-136 3-73 (79)
2 2ctp_A DNAJ homolog subfamily 99.8 6.1E-20 2.1E-24 141.2 8.1 69 67-136 4-72 (78)
3 2yua_A Williams-beuren syndrom 99.8 8.7E-20 3E-24 146.8 8.3 72 65-136 12-83 (99)
4 2ej7_A HCG3 gene; HCG3 protein 99.8 1.3E-19 4.5E-24 140.5 8.7 69 68-136 7-76 (82)
5 1hdj_A Human HSP40, HDJ-1; mol 99.8 9.9E-20 3.4E-24 139.6 7.8 67 69-136 2-68 (77)
6 2ctr_A DNAJ homolog subfamily 99.8 1.7E-19 5.9E-24 141.9 7.8 69 67-136 4-72 (88)
7 2cug_A Mkiaa0962 protein; DNAJ 99.8 2.5E-19 8.5E-24 141.0 7.9 68 68-136 15-82 (88)
8 2och_A Hypothetical protein DN 99.8 2.1E-19 7E-24 136.5 6.9 66 68-136 6-71 (73)
9 1wjz_A 1700030A21RIK protein; 99.8 2.6E-19 8.9E-24 142.2 7.5 71 66-136 12-88 (94)
10 2ctq_A DNAJ homolog subfamily 99.8 2E-19 7E-24 147.8 6.8 70 67-136 17-86 (112)
11 2ctw_A DNAJ homolog subfamily 99.8 4.7E-19 1.6E-23 145.0 8.8 71 67-137 14-84 (109)
12 2dmx_A DNAJ homolog subfamily 99.8 6.1E-19 2.1E-23 139.8 8.5 70 67-136 6-76 (92)
13 2l6l_A DNAJ homolog subfamily 99.8 2E-19 7E-24 155.6 5.0 70 67-136 7-82 (155)
14 2o37_A Protein SIS1; HSP40, J- 99.8 5.2E-19 1.8E-23 140.4 6.4 67 68-137 6-72 (92)
15 1bq0_A DNAJ, HSP40; chaperone, 99.8 3.2E-19 1.1E-23 144.4 4.1 69 69-137 2-70 (103)
16 2lgw_A DNAJ homolog subfamily 99.7 1.3E-18 4.3E-23 140.2 6.9 67 70-136 2-69 (99)
17 2qsa_A DNAJ homolog DNJ-2; J-d 99.7 3.3E-18 1.1E-22 139.7 4.8 70 68-137 13-86 (109)
18 2ys8_A RAB-related GTP-binding 99.7 1.2E-17 4E-22 132.1 5.9 62 69-131 26-87 (90)
19 3apq_A DNAJ homolog subfamily 99.7 1.3E-17 4.4E-22 149.3 5.9 68 70-137 2-69 (210)
20 2pf4_E Small T antigen; PP2A, 99.7 7.6E-18 2.6E-22 148.3 2.2 65 69-137 10-76 (174)
21 1gh6_A Large T antigen; tumor 99.7 1.1E-17 3.9E-22 137.9 2.4 65 69-137 7-73 (114)
22 3hho_A CO-chaperone protein HS 99.6 1E-16 3.5E-21 141.5 5.8 68 68-135 2-76 (174)
23 1iur_A KIAA0730 protein; DNAJ 99.6 7.9E-17 2.7E-21 127.0 3.9 68 65-132 11-79 (88)
24 1faf_A Large T antigen; J doma 99.6 1.5E-16 5.2E-21 122.8 4.4 61 69-133 10-72 (79)
25 3bvo_A CO-chaperone protein HS 99.6 3.3E-16 1.1E-20 141.8 7.3 81 55-135 28-115 (207)
26 3lz8_A Putative chaperone DNAJ 99.6 3.5E-17 1.2E-21 157.8 0.0 69 67-136 25-93 (329)
27 1fpo_A HSC20, chaperone protei 99.6 2.8E-16 9.7E-21 138.3 5.1 65 71-135 2-73 (171)
28 1n4c_A Auxilin; four helix bun 99.6 3.1E-16 1.1E-20 138.9 4.0 65 68-132 115-182 (182)
29 2guz_A Mitochondrial import in 99.6 7.2E-16 2.5E-20 116.6 4.3 60 66-129 10-70 (71)
30 2qwo_B Putative tyrosine-prote 99.5 1.2E-15 4E-20 121.1 2.8 56 70-125 33-91 (92)
31 3uo3_A J-type CO-chaperone JAC 99.5 2.1E-15 7.2E-20 133.8 4.0 66 67-135 8-80 (181)
32 3ag7_A Putative uncharacterize 99.5 2.1E-15 7.3E-20 122.7 2.4 60 67-127 38-104 (106)
33 3apo_A DNAJ homolog subfamily 99.5 4.5E-15 1.5E-19 156.7 1.1 70 67-136 18-87 (780)
34 2y4t_A DNAJ homolog subfamily 98.9 1.6E-09 5.5E-14 103.5 5.7 65 70-134 382-449 (450)
35 2guz_B Mitochondrial import in 98.8 2.8E-09 9.7E-14 78.9 5.2 52 70-125 4-58 (65)
36 1iqz_A Ferredoxin; iron-sulfer 98.5 4.6E-08 1.6E-12 74.4 2.7 60 155-215 3-71 (81)
37 1dax_A Ferredoxin I; electron 98.3 3.4E-07 1.2E-11 66.0 3.5 60 155-214 3-63 (64)
38 1rof_A Ferredoxin; electron tr 98.2 6.2E-07 2.1E-11 63.3 3.7 57 156-213 3-59 (60)
39 1sj1_A Ferredoxin; thermostabi 98.1 6.2E-07 2.1E-11 64.5 1.9 58 155-213 3-64 (66)
40 1f2g_A Ferredoxin II; electron 98.1 1.1E-06 3.8E-11 61.9 2.7 55 156-212 2-57 (58)
41 1dwl_A Ferredoxin I; electron 98.1 1.2E-06 4E-11 61.6 2.1 58 156-213 2-59 (59)
42 1rgv_A Ferredoxin; electron tr 97.5 0.00014 4.9E-09 54.5 6.0 69 157-228 2-75 (80)
43 2fgo_A Ferredoxin; allochromat 97.5 0.00012 4.2E-09 55.1 5.5 70 157-229 2-76 (82)
44 2zvs_A Uncharacterized ferredo 97.4 0.00018 6.1E-09 54.7 5.4 70 157-229 2-77 (85)
45 3eun_A Ferredoxin; electron tr 97.3 0.00025 8.4E-09 53.6 5.1 57 157-215 2-63 (82)
46 1xer_A Ferredoxin; electron tr 97.2 3.6E-05 1.2E-09 60.4 -1.1 57 155-214 37-102 (103)
47 1bc6_A 7-Fe ferredoxin; electr 97.0 0.00069 2.4E-08 50.3 4.4 55 157-216 2-60 (77)
48 1jb0_C Photosystem I iron-sulf 96.9 6.6E-05 2.3E-09 55.9 -1.8 60 156-215 3-67 (80)
49 7fd1_A FD1, protein (7-Fe ferr 96.7 0.00051 1.8E-08 54.3 2.1 54 157-215 2-59 (106)
50 1h98_A Ferredoxin; electron tr 96.7 0.00079 2.7E-08 50.1 2.8 55 157-216 2-60 (78)
51 2fdn_A Ferredoxin; electron tr 96.7 0.0012 4.1E-08 45.6 3.3 48 160-212 5-54 (55)
52 3gyx_B Adenylylsulfate reducta 96.6 0.00021 7.1E-09 61.9 -1.1 60 156-218 2-69 (166)
53 1jnr_B Adenylylsulfate reducta 96.6 0.00023 8E-09 60.5 -1.0 60 156-218 3-70 (150)
54 3i9v_9 NADH-quinone oxidoreduc 96.3 0.0011 3.9E-08 56.8 1.5 54 159-215 49-118 (182)
55 1gte_A Dihydropyrimidine dehyd 96.1 0.0011 3.6E-08 72.4 0.5 58 155-215 945-1007(1025)
56 2v2k_A Ferredoxin; iron, trans 96.1 0.0016 5.4E-08 51.2 1.1 55 157-216 2-60 (105)
57 1hfe_L Protein (Fe-only hydrog 95.9 0.00058 2E-08 67.5 -2.6 54 155-212 27-83 (421)
58 1kqf_B FDH-N beta S, formate d 95.7 0.0026 8.9E-08 59.8 1.3 60 155-217 125-191 (294)
59 2vpz_B NRFC protein; oxidoredu 95.4 0.0055 1.9E-07 54.1 2.2 57 155-215 82-145 (195)
60 1ti6_B Pyrogallol hydroxytrans 95.2 0.012 4E-07 54.9 3.7 61 155-218 91-162 (274)
61 3c8y_A Iron hydrogenase 1; dit 95.0 0.0021 7.1E-08 65.9 -2.2 59 155-215 139-210 (574)
62 3i9v_3 NADH-quinone oxidoreduc 94.9 0.0033 1.1E-07 66.7 -1.2 59 155-214 173-239 (783)
63 2ivf_B Ethylbenzene dehydrogen 94.1 0.013 4.5E-07 56.5 1.3 60 155-217 176-242 (352)
64 2c42_A Pyruvate-ferredoxin oxi 93.9 0.017 5.7E-07 64.3 1.6 58 157-217 682-768 (1231)
65 1h0h_B Formate dehydrogenase ( 93.8 0.012 4.1E-07 52.7 0.2 59 155-216 100-167 (214)
66 2vpz_B NRFC protein; oxidoredu 93.0 0.064 2.2E-06 47.2 3.7 58 155-215 50-110 (195)
67 1q16_B Respiratory nitrate red 92.2 0.06 2E-06 54.4 2.6 56 155-213 209-271 (512)
68 2ivf_B Ethylbenzene dehydrogen 92.1 0.04 1.4E-06 53.1 1.2 58 155-215 143-204 (352)
69 1q16_B Respiratory nitrate red 90.5 0.067 2.3E-06 54.1 1.0 58 155-215 176-237 (512)
70 2gmh_A Electron transfer flavo 89.3 0.14 4.7E-06 52.2 2.2 55 158-215 507-573 (584)
71 1kqf_B FDH-N beta S, formate d 87.9 0.12 4.1E-06 48.3 0.6 56 157-215 94-153 (294)
72 1h0h_B Formate dehydrogenase ( 87.9 0.18 6.2E-06 44.9 1.7 55 158-215 67-130 (214)
73 1ti6_B Pyrogallol hydroxytrans 86.9 0.2 6.7E-06 46.5 1.4 55 156-214 61-118 (274)
74 2pzi_A Probable serine/threoni 82.0 0.77 2.6E-05 47.2 3.4 46 69-122 628-675 (681)
75 3mm5_B Sulfite reductase, diss 79.3 0.32 1.1E-05 46.9 -0.6 55 156-213 200-259 (366)
76 2wdq_B Succinate dehydrogenase 69.7 0.48 1.6E-05 42.4 -2.0 21 156-176 142-162 (238)
77 7fd1_A FD1, protein (7-Fe ferr 67.8 1.9 6.5E-05 33.3 1.4 23 156-178 32-54 (106)
78 3mm5_A Sulfite reductase, diss 65.9 1.3 4.5E-05 43.5 0.2 19 73-95 137-155 (418)
79 3j16_B RLI1P; ribosome recycli 64.9 1.2 4.2E-05 45.7 -0.3 24 154-177 46-69 (608)
80 2v2k_A Ferredoxin; iron, trans 62.1 2.9 9.8E-05 32.0 1.5 23 156-178 32-54 (105)
81 3or1_B Sulfite reductase beta; 60.4 2.3 8E-05 41.1 0.8 55 156-213 211-276 (386)
82 1bc6_A 7-Fe ferredoxin; electr 59.6 1.8 6.3E-05 31.2 -0.1 23 156-178 32-54 (77)
83 3mm5_B Sulfite reductase, diss 58.7 2.7 9.1E-05 40.3 0.9 25 154-178 232-256 (366)
84 3cf4_A Acetyl-COA decarboxylas 58.5 0.76 2.6E-05 48.9 -3.3 53 157-212 411-472 (807)
85 3or1_B Sulfite reductase beta; 57.0 1.1 3.6E-05 43.6 -2.3 21 156-176 251-271 (386)
86 1h98_A Ferredoxin; electron tr 55.5 2.6 8.8E-05 30.5 0.1 23 156-178 32-54 (78)
87 3or1_A Sulfite reductase alpha 54.5 2.9 9.8E-05 41.3 0.3 35 155-189 295-329 (437)
88 1xer_A Ferredoxin; electron tr 53.5 2.7 9.2E-05 31.9 -0.1 23 156-178 76-98 (103)
89 2pa8_D DNA-directed RNA polyme 53.0 11 0.00037 34.4 3.9 83 164-265 174-259 (265)
90 3i9v_9 NADH-quinone oxidoreduc 50.1 2.8 9.6E-05 35.2 -0.5 22 157-178 92-113 (182)
91 1jb0_C Photosystem I iron-sulf 48.5 3.7 0.00013 29.4 -0.0 21 158-178 42-62 (80)
92 1jnr_B Adenylylsulfate reducta 46.6 3.9 0.00013 34.0 -0.2 22 156-177 40-61 (150)
93 3gyx_B Adenylylsulfate reducta 42.7 5 0.00017 34.0 -0.1 22 157-178 40-61 (166)
94 1hfe_L Protein (Fe-only hydrog 42.3 9.1 0.00031 37.3 1.7 21 159-179 62-82 (421)
95 2c42_A Pyruvate-ferredoxin oxi 40.8 5.1 0.00017 44.6 -0.4 20 156-175 737-756 (1231)
96 3bk7_A ABC transporter ATP-bin 37.7 5.8 0.0002 40.6 -0.6 23 154-176 60-82 (607)
97 2h88_B Succinate dehydrogenase 36.8 9.9 0.00034 34.1 0.9 19 158-176 153-171 (252)
98 3j16_B RLI1P; ribosome recycli 35.8 6.5 0.00022 40.3 -0.6 58 155-215 8-75 (608)
99 3vr8_B Iron-sulfur subunit of 33.6 15 0.00051 34.0 1.6 17 161-177 180-196 (282)
100 3c8y_A Iron hydrogenase 1; dit 29.5 11 0.00039 38.1 -0.0 23 156-178 183-205 (574)
101 1kf6_B Fumarate reductase iron 29.4 8.5 0.00029 34.2 -0.9 22 156-177 141-162 (243)
102 2pa8_D DNA-directed RNA polyme 28.5 13 0.00045 33.8 0.2 25 157-181 197-221 (265)
103 2gmh_A Electron transfer flavo 24.7 14 0.00049 37.2 -0.3 24 155-178 545-568 (584)
104 3mm5_A Sulfite reductase, diss 24.6 29 0.00098 33.9 1.9 24 74-98 98-123 (418)
105 2bs2_B Quinol-fumarate reducta 21.4 12 0.00041 33.1 -1.4 19 158-176 146-164 (241)
106 3i9v_3 NADH-quinone oxidoreduc 20.2 24 0.00082 37.1 0.3 23 161-183 218-240 (783)
107 1kf6_B Fumarate reductase iron 20.1 20 0.00069 31.6 -0.2 21 159-179 200-220 (243)
No 1
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.82 E-value=1.9e-20 Score=144.20 Aligned_cols=71 Identities=41% Similarity=0.677 Sum_probs=66.5
Q ss_pred CCCCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcChhhhhhhcccc
Q 019486 66 DAIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (340)
Q Consensus 66 ~~~~~d~Y~vLgv~~~as~~eIk~AYr~la~~~HPD~~~~~~~~~~~f~~i~~Ay~vLsdp~~R~~YD~~~ 136 (340)
.....|||+||||+++++.++||++||+|++++|||++++++.+.+.|+.|++||+||+||.+|..||.++
T Consensus 3 ~~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g 73 (79)
T 2dn9_A 3 SGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYG 73 (79)
T ss_dssp SSCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSC
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhcc
Confidence 34567999999999999999999999999999999999877788999999999999999999999999875
No 2
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=6.1e-20 Score=141.16 Aligned_cols=69 Identities=38% Similarity=0.587 Sum_probs=65.0
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcChhhhhhhcccc
Q 019486 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (340)
Q Consensus 67 ~~~~d~Y~vLgv~~~as~~eIk~AYr~la~~~HPD~~~~~~~~~~~f~~i~~Ay~vLsdp~~R~~YD~~~ 136 (340)
....|||+||||+++++.++||++|++|++++|||++.. +.+.+.|+.|++||+||+||.+|..||.++
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~ 72 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHA-PGATEAFKAIGTAYAVLSNPEKRKQYDQFG 72 (78)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSS-HHHHHHHHHHHHHHHHHTSHHHHHHHHHTC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHcC
Confidence 456799999999999999999999999999999999886 778999999999999999999999999875
No 3
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=8.7e-20 Score=146.75 Aligned_cols=72 Identities=31% Similarity=0.393 Sum_probs=67.1
Q ss_pred CCCCCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcChhhhhhhcccc
Q 019486 65 TDAIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (340)
Q Consensus 65 ~~~~~~d~Y~vLgv~~~as~~eIk~AYr~la~~~HPD~~~~~~~~~~~f~~i~~Ay~vLsdp~~R~~YD~~~ 136 (340)
......|||+||||+++++.++||++||+|+++||||++++++.+.+.|+.|++||+||+||.+|..||...
T Consensus 12 ~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l 83 (99)
T 2yua_A 12 CSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGL 83 (99)
T ss_dssp CSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTC
T ss_pred CCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhc
Confidence 455678999999999999999999999999999999999877888999999999999999999999999853
No 4
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.80 E-value=1.3e-19 Score=140.47 Aligned_cols=69 Identities=36% Similarity=0.490 Sum_probs=64.0
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCh-HHHHHHHHHHHHHHHhcChhhhhhhcccc
Q 019486 68 IADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDP-ETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (340)
Q Consensus 68 ~~~d~Y~vLgv~~~as~~eIk~AYr~la~~~HPD~~~~~~-~~~~~f~~i~~Ay~vLsdp~~R~~YD~~~ 136 (340)
...|||+||||+++++.++||++||+|++++|||+++... .+.+.|+.|++||+||+||.+|..||.++
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g 76 (82)
T 2ej7_A 7 GMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYG 76 (82)
T ss_dssp SSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTC
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcC
Confidence 4579999999999999999999999999999999998753 57789999999999999999999999875
No 5
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.80 E-value=9.9e-20 Score=139.64 Aligned_cols=67 Identities=39% Similarity=0.608 Sum_probs=63.3
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcChhhhhhhcccc
Q 019486 69 ADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (340)
Q Consensus 69 ~~d~Y~vLgv~~~as~~eIk~AYr~la~~~HPD~~~~~~~~~~~f~~i~~Ay~vLsdp~~R~~YD~~~ 136 (340)
..|||+||||+++++.++||++|++|++++|||++++ +.+.+.|+.|++||++|+||.+|..||.++
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~ 68 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-PGAEEKFKEIAEAYDVLSDPRKREIFDRYG 68 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC-TTHHHHHHHHHHHHHHTTCHHHHHHHHHTC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHHc
Confidence 4699999999999999999999999999999999886 668899999999999999999999999875
No 6
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=1.7e-19 Score=141.93 Aligned_cols=69 Identities=33% Similarity=0.510 Sum_probs=65.0
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcChhhhhhhcccc
Q 019486 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (340)
Q Consensus 67 ~~~~d~Y~vLgv~~~as~~eIk~AYr~la~~~HPD~~~~~~~~~~~f~~i~~Ay~vLsdp~~R~~YD~~~ 136 (340)
....|||+||||+++++.++||++||+|++++|||+++. +.+.+.|+.|++||+||+||.+|..||.++
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~ 72 (88)
T 2ctr_A 4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS-PDAEAKFREIAEAYETLSDANRRKEYDTLG 72 (88)
T ss_dssp CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCS-HHHHHHHHHHHHHHHHHHSSHHHHHHHHTC
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hHHHHHHHHHHHHHHHHCCHHHHHHHHHhC
Confidence 456799999999999999999999999999999999985 788999999999999999999999999875
No 7
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.78 E-value=2.5e-19 Score=141.02 Aligned_cols=68 Identities=34% Similarity=0.522 Sum_probs=64.2
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcChhhhhhhcccc
Q 019486 68 IADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (340)
Q Consensus 68 ~~~d~Y~vLgv~~~as~~eIk~AYr~la~~~HPD~~~~~~~~~~~f~~i~~Ay~vLsdp~~R~~YD~~~ 136 (340)
...|||+||||+++++.++||++||+|++++|||++++ +.+.+.|+.|++||++|+||.+|..||.++
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g 82 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD-PGAEDRFIQISKAYEILSNEEKRTNYDHYG 82 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS-TTHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHHCCHHHHHHHHHcC
Confidence 46799999999999999999999999999999999887 678899999999999999999999999875
No 8
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.78 E-value=2.1e-19 Score=136.55 Aligned_cols=66 Identities=38% Similarity=0.581 Sum_probs=61.6
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcChhhhhhhcccc
Q 019486 68 IADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (340)
Q Consensus 68 ~~~d~Y~vLgv~~~as~~eIk~AYr~la~~~HPD~~~~~~~~~~~f~~i~~Ay~vLsdp~~R~~YD~~~ 136 (340)
...|||+||||+++++.++||++|++|++++|||++++ ..+.|+.|++||+||+||.+|..||.+|
T Consensus 6 ~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~---~~~~f~~i~~Ay~~L~d~~~R~~YD~~g 71 (73)
T 2och_A 6 KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD---GAEQFKQISQAYEVLSDEKKRQIYDQGG 71 (73)
T ss_dssp CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTT---CHHHHHHHHHHHHHHTSHHHHHHHHHTC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcC---HHHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 45799999999999999999999999999999999876 3689999999999999999999999875
No 9
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.78 E-value=2.6e-19 Score=142.20 Aligned_cols=71 Identities=24% Similarity=0.456 Sum_probs=64.5
Q ss_pred CCCCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCC------hHHHHHHHHHHHHHHHhcChhhhhhhcccc
Q 019486 66 DAIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDD------PETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (340)
Q Consensus 66 ~~~~~d~Y~vLgv~~~as~~eIk~AYr~la~~~HPD~~~~~------~~~~~~f~~i~~Ay~vLsdp~~R~~YD~~~ 136 (340)
.....|||+||||+++++.++||++||+|+++||||+++.+ +.+.+.|+.|++||+||+||.+|..||...
T Consensus 12 ~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l 88 (94)
T 1wjz_A 12 QTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQR 88 (94)
T ss_dssp SSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHS
T ss_pred cCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHc
Confidence 34567999999999999999999999999999999998743 457899999999999999999999999874
No 10
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=2e-19 Score=147.77 Aligned_cols=70 Identities=24% Similarity=0.411 Sum_probs=66.0
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcChhhhhhhcccc
Q 019486 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (340)
Q Consensus 67 ~~~~d~Y~vLgv~~~as~~eIk~AYr~la~~~HPD~~~~~~~~~~~f~~i~~Ay~vLsdp~~R~~YD~~~ 136 (340)
....|||+||||+++++.++||+|||+|++++|||++++++.+.+.|+.|++||+||+||.+|..||.++
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~ 86 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWR 86 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhh
Confidence 3568999999999999999999999999999999999877889999999999999999999999999875
No 11
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.77 E-value=4.7e-19 Score=144.98 Aligned_cols=71 Identities=35% Similarity=0.547 Sum_probs=66.4
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcChhhhhhhccccc
Q 019486 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (340)
Q Consensus 67 ~~~~d~Y~vLgv~~~as~~eIk~AYr~la~~~HPD~~~~~~~~~~~f~~i~~Ay~vLsdp~~R~~YD~~~~ 137 (340)
....|||+||||+++++.++||++||+|++++|||++++++++.+.|+.|++||+||+||.+|..||.++.
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~ 84 (109)
T 2ctw_A 14 TSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGS 84 (109)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCH
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcc
Confidence 34579999999999999999999999999999999998878889999999999999999999999998753
No 12
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=6.1e-19 Score=139.79 Aligned_cols=70 Identities=39% Similarity=0.606 Sum_probs=64.4
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCC-hHHHHHHHHHHHHHHHhcChhhhhhhcccc
Q 019486 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDD-PETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (340)
Q Consensus 67 ~~~~d~Y~vLgv~~~as~~eIk~AYr~la~~~HPD~~~~~-~~~~~~f~~i~~Ay~vLsdp~~R~~YD~~~ 136 (340)
....|||+||||+++++.++||++||+|+++||||+++.. ..+++.|+.|++||+||+||.+|..||..+
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~ 76 (92)
T 2dmx_A 6 SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAG 76 (92)
T ss_dssp CCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHC
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhC
Confidence 3457999999999999999999999999999999998764 467889999999999999999999999875
No 13
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.76 E-value=2e-19 Score=155.64 Aligned_cols=70 Identities=24% Similarity=0.423 Sum_probs=63.6
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCh------HHHHHHHHHHHHHHHhcChhhhhhhcccc
Q 019486 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDP------ETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (340)
Q Consensus 67 ~~~~d~Y~vLgv~~~as~~eIk~AYr~la~~~HPD~~~~~~------~~~~~f~~i~~Ay~vLsdp~~R~~YD~~~ 136 (340)
....|||+||||+++++.++||++||+|++++|||++++.+ .+.+.|..|++||+||+||.+|..||..+
T Consensus 7 ~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~ 82 (155)
T 2l6l_A 7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQR 82 (155)
T ss_dssp CCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHH
T ss_pred CCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 45579999999999999999999999999999999988753 25689999999999999999999999764
No 14
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.76 E-value=5.2e-19 Score=140.37 Aligned_cols=67 Identities=31% Similarity=0.533 Sum_probs=61.9
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcChhhhhhhccccc
Q 019486 68 IADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (340)
Q Consensus 68 ~~~d~Y~vLgv~~~as~~eIk~AYr~la~~~HPD~~~~~~~~~~~f~~i~~Ay~vLsdp~~R~~YD~~~~ 137 (340)
...|||+||||+++++.++||++||+|++++|||+++++ .+.|++|++||+||+||.+|..||.++.
T Consensus 6 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~~~ 72 (92)
T 2o37_A 6 KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIYDQYGL 72 (92)
T ss_dssp SCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTSHHHHHHHHHHCH
T ss_pred cCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCCHHHHHHHHHHCH
Confidence 457999999999999999999999999999999998763 5699999999999999999999998753
No 15
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.75 E-value=3.2e-19 Score=144.39 Aligned_cols=69 Identities=35% Similarity=0.537 Sum_probs=64.8
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcChhhhhhhccccc
Q 019486 69 ADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (340)
Q Consensus 69 ~~d~Y~vLgv~~~as~~eIk~AYr~la~~~HPD~~~~~~~~~~~f~~i~~Ay~vLsdp~~R~~YD~~~~ 137 (340)
..|||+||||+++++.++||++||+|++++|||++++++++++.|++|++||+||+||.+|..||.++.
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~ 70 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGH 70 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTT
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhh
Confidence 369999999999999999999999999999999998767788999999999999999999999998753
No 16
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.75 E-value=1.3e-18 Score=140.16 Aligned_cols=67 Identities=33% Similarity=0.479 Sum_probs=62.7
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCC-hHHHHHHHHHHHHHHHhcChhhhhhhcccc
Q 019486 70 DDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDD-PETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (340)
Q Consensus 70 ~d~Y~vLgv~~~as~~eIk~AYr~la~~~HPD~~~~~-~~~~~~f~~i~~Ay~vLsdp~~R~~YD~~~ 136 (340)
.|||+||||+++++.++||++||+|++++|||+++.. ..+.+.|+.|++||+||+||.+|..||.++
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g 69 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYG 69 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhC
Confidence 5899999999999999999999999999999998774 457889999999999999999999999875
No 17
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.71 E-value=3.3e-18 Score=139.73 Aligned_cols=70 Identities=21% Similarity=0.290 Sum_probs=64.2
Q ss_pred CCCCchhhcCCCCCC-CHHHHHHHHHHHHHhcCCCCCCC---ChHHHHHHHHHHHHHHHhcChhhhhhhccccc
Q 019486 68 IADDYYAVLGLLPDA-TPEQIKKAYYNCMKACHPDLSGD---DPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (340)
Q Consensus 68 ~~~d~Y~vLgv~~~a-s~~eIk~AYr~la~~~HPD~~~~---~~~~~~~f~~i~~Ay~vLsdp~~R~~YD~~~~ 137 (340)
...|||+||||++++ +.++||++||+|++++|||++++ .+.+.+.|+.|++||+||+||.+|..||..+.
T Consensus 13 ~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 467999999999999 99999999999999999999876 35678999999999999999999999998753
No 18
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=1.2e-17 Score=132.13 Aligned_cols=62 Identities=21% Similarity=0.338 Sum_probs=58.2
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcChhhhhh
Q 019486 69 ADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMV 131 (340)
Q Consensus 69 ~~d~Y~vLgv~~~as~~eIk~AYr~la~~~HPD~~~~~~~~~~~f~~i~~Ay~vLsdp~~R~~ 131 (340)
..|||+||||+++++.++||++||+|+++||||++.+ +.+.+.|+.|++||++|+||.+|..
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVA-PGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCC-TTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCcccccC
Confidence 4799999999999999999999999999999999976 6688999999999999999999874
No 19
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.69 E-value=1.3e-17 Score=149.29 Aligned_cols=68 Identities=28% Similarity=0.502 Sum_probs=64.6
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcChhhhhhhccccc
Q 019486 70 DDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (340)
Q Consensus 70 ~d~Y~vLgv~~~as~~eIk~AYr~la~~~HPD~~~~~~~~~~~f~~i~~Ay~vLsdp~~R~~YD~~~~ 137 (340)
.|||+||||+++|+.++||+|||+|++++|||++++++++.+.|+.|++||++|+||.+|..||.++.
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~ 69 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGE 69 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcc
Confidence 58999999999999999999999999999999998778899999999999999999999999999753
No 20
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.67 E-value=7.6e-18 Score=148.33 Aligned_cols=65 Identities=28% Similarity=0.358 Sum_probs=57.8
Q ss_pred CCCchhhcCCCCCCC--HHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcChhhhhhhccccc
Q 019486 69 ADDYYAVLGLLPDAT--PEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (340)
Q Consensus 69 ~~d~Y~vLgv~~~as--~~eIk~AYr~la~~~HPD~~~~~~~~~~~f~~i~~Ay~vLsdp~~R~~YD~~~~ 137 (340)
..|||+||||+++|+ .++||+|||++++++|||++++ ++.|++|++||+||+||.+|..||.++.
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 468999999999998 6999999999999999999876 4789999999999999999999999875
No 21
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.67 E-value=1.1e-17 Score=137.90 Aligned_cols=65 Identities=28% Similarity=0.363 Sum_probs=60.1
Q ss_pred CCCchhhcCCCCCCCH--HHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcChhhhhhhccccc
Q 019486 69 ADDYYAVLGLLPDATP--EQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (340)
Q Consensus 69 ~~d~Y~vLgv~~~as~--~eIk~AYr~la~~~HPD~~~~~~~~~~~f~~i~~Ay~vLsdp~~R~~YD~~~~ 137 (340)
..+||+||||+++++. ++||+|||+|++++|||++++ .+.|++|++||+||+||.+|..||.++.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 4589999999999999 999999999999999999876 4789999999999999999999998653
No 22
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.64 E-value=1e-16 Score=141.50 Aligned_cols=68 Identities=25% Similarity=0.362 Sum_probs=61.2
Q ss_pred CCCCchhhcCCCCCCC--HHHHHHHHHHHHHhcCCCCCCCChH-----HHHHHHHHHHHHHHhcChhhhhhhccc
Q 019486 68 IADDYYAVLGLLPDAT--PEQIKKAYYNCMKACHPDLSGDDPE-----TTNFCMFINEVYAVLSDPVQRMVYDEI 135 (340)
Q Consensus 68 ~~~d~Y~vLgv~~~as--~~eIk~AYr~la~~~HPD~~~~~~~-----~~~~f~~i~~Ay~vLsdp~~R~~YD~~ 135 (340)
...|||+||||+++++ .++||++||+|+++||||++++.+. +.+.|..||+||+||+||.+|..||..
T Consensus 2 ~~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 76 (174)
T 3hho_A 2 NAMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLS 76 (174)
T ss_dssp --CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 3579999999999988 9999999999999999999887543 568999999999999999999999975
No 23
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.64 E-value=7.9e-17 Score=126.95 Aligned_cols=68 Identities=12% Similarity=0.042 Sum_probs=59.9
Q ss_pred CCCCCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCh-HHHHHHHHHHHHHHHhcChhhhhhh
Q 019486 65 TDAIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDP-ETTNFCMFINEVYAVLSDPVQRMVY 132 (340)
Q Consensus 65 ~~~~~~d~Y~vLgv~~~as~~eIk~AYr~la~~~HPD~~~~~~-~~~~~f~~i~~Ay~vLsdp~~R~~Y 132 (340)
......++|+||||+++++.++||+|||+|+++||||+++++. .+++.|+.|++||+||+|...|..+
T Consensus 11 ~~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~~ 79 (88)
T 1iur_A 11 RGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQN 79 (88)
T ss_dssp SSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSSS
T ss_pred CCccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 3445579999999999999999999999999999999998863 4789999999999999998877433
No 24
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.62 E-value=1.5e-16 Score=122.82 Aligned_cols=61 Identities=16% Similarity=0.277 Sum_probs=55.9
Q ss_pred CCCchhhcCCCCC--CCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcChhhhhhhc
Q 019486 69 ADDYYAVLGLLPD--ATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYD 133 (340)
Q Consensus 69 ~~d~Y~vLgv~~~--as~~eIk~AYr~la~~~HPD~~~~~~~~~~~f~~i~~Ay~vLsdp~~R~~YD 133 (340)
..++|+||||+++ ++.++||++||+|++++|||++++ .+.|++|++||++|+|+.+|..++
T Consensus 10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~~~~r~~~~ 72 (79)
T 1faf_A 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLRMN 72 (79)
T ss_dssp HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhhHHHHHHHh
Confidence 3589999999999 999999999999999999999764 578999999999999999998743
No 25
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.62 E-value=3.3e-16 Score=141.85 Aligned_cols=81 Identities=15% Similarity=0.303 Sum_probs=66.5
Q ss_pred cccccccCCCCCCCCCCchhhcCCCCC--CCHHHHHHHHHHHHHhcCCCCCCCChH-----HHHHHHHHHHHHHHhcChh
Q 019486 55 ARVTAEDSASTDAIADDYYAVLGLLPD--ATPEQIKKAYYNCMKACHPDLSGDDPE-----TTNFCMFINEVYAVLSDPV 127 (340)
Q Consensus 55 ~~~~~~~~~~~~~~~~d~Y~vLgv~~~--as~~eIk~AYr~la~~~HPD~~~~~~~-----~~~~f~~i~~Ay~vLsdp~ 127 (340)
+.|.............|||+||||+++ ++..+||++||+|+++||||++++.+. +.+.|..||+||+||+||.
T Consensus 28 ~fC~~c~~~q~~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~ 107 (207)
T 3bvo_A 28 FFCPQCRALQAPDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPL 107 (207)
T ss_dssp CBCTTTCCBCCCCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHH
T ss_pred cccccccccCCCCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH
Confidence 444444444444456799999999986 799999999999999999999886532 4578999999999999999
Q ss_pred hhhhhccc
Q 019486 128 QRMVYDEI 135 (340)
Q Consensus 128 ~R~~YD~~ 135 (340)
+|..||..
T Consensus 108 ~R~~Yd~~ 115 (207)
T 3bvo_A 108 SRGLYLLK 115 (207)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999964
No 26
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.62 E-value=3.5e-17 Score=157.84 Aligned_cols=69 Identities=32% Similarity=0.535 Sum_probs=0.0
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcChhhhhhhcccc
Q 019486 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (340)
Q Consensus 67 ~~~~d~Y~vLgv~~~as~~eIk~AYr~la~~~HPD~~~~~~~~~~~f~~i~~Ay~vLsdp~~R~~YD~~~ 136 (340)
+...|||+||||+++||.++||+|||+|+++||||++++ +.+++.|++|++||+||+||.+|..||.++
T Consensus 25 m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~ 93 (329)
T 3lz8_A 25 MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE-NDAEAKFKDLAEAWEVLKDEQRRAEYDQLW 93 (329)
T ss_dssp ----------------------------------------------------------------------
T ss_pred ccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCC-hHHHHHHHHHHHHHHHhhhhhhhcccchhh
Confidence 445799999999999999999999999999999999886 578899999999999999999999999873
No 27
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.61 E-value=2.8e-16 Score=138.28 Aligned_cols=65 Identities=20% Similarity=0.385 Sum_probs=60.2
Q ss_pred CchhhcCCCCCC--CHHHHHHHHHHHHHhcCCCCCCCChH-----HHHHHHHHHHHHHHhcChhhhhhhccc
Q 019486 71 DYYAVLGLLPDA--TPEQIKKAYYNCMKACHPDLSGDDPE-----TTNFCMFINEVYAVLSDPVQRMVYDEI 135 (340)
Q Consensus 71 d~Y~vLgv~~~a--s~~eIk~AYr~la~~~HPD~~~~~~~-----~~~~f~~i~~Ay~vLsdp~~R~~YD~~ 135 (340)
|||+||||++++ +..+||++||+|+++||||++++.+. +.+.|..||+||+||+||.+|..||..
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 73 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLS 73 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 799999999999 99999999999999999999887543 457999999999999999999999986
No 28
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.60 E-value=3.1e-16 Score=138.88 Aligned_cols=65 Identities=25% Similarity=0.452 Sum_probs=59.9
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChH---HHHHHHHHHHHHHHhcChhhhhhh
Q 019486 68 IADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPE---TTNFCMFINEVYAVLSDPVQRMVY 132 (340)
Q Consensus 68 ~~~d~Y~vLgv~~~as~~eIk~AYr~la~~~HPD~~~~~~~---~~~~f~~i~~Ay~vLsdp~~R~~Y 132 (340)
...|||+||||+.+++.++||+|||+|++++|||++++.+. +++.|+.|++||+||+|+.+|..|
T Consensus 115 ~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 115 AGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp TTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred CccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 34699999999999999999999999999999999887543 788999999999999999999987
No 29
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.58 E-value=7.2e-16 Score=116.57 Aligned_cols=60 Identities=23% Similarity=0.250 Sum_probs=53.1
Q ss_pred CCCCCCchhhcCCCC-CCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcChhhh
Q 019486 66 DAIADDYYAVLGLLP-DATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQR 129 (340)
Q Consensus 66 ~~~~~d~Y~vLgv~~-~as~~eIk~AYr~la~~~HPD~~~~~~~~~~~f~~i~~Ay~vLsdp~~R 129 (340)
.....++|+||||++ +++.++||++||+|++++|||++++ .+.|++|++||++|+|+..|
T Consensus 10 ~m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~----~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 10 KMNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS----PFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp SCCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC----HHHHHHHHHHHHHHHHHCCC
T ss_pred CCCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC----HHHHHHHHHHHHHHhhhhhc
Confidence 344569999999999 7999999999999999999999643 56999999999999998765
No 30
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.55 E-value=1.2e-15 Score=121.10 Aligned_cols=56 Identities=23% Similarity=0.425 Sum_probs=51.5
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCh---HHHHHHHHHHHHHHHhcC
Q 019486 70 DDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDP---ETTNFCMFINEVYAVLSD 125 (340)
Q Consensus 70 ~d~Y~vLgv~~~as~~eIk~AYr~la~~~HPD~~~~~~---~~~~~f~~i~~Ay~vLsd 125 (340)
.++|++|||+.+||.++||+|||+++++||||++++++ .+++.|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 68999999999999999999999999999999988754 378899999999999974
No 31
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.54 E-value=2.1e-15 Score=133.84 Aligned_cols=66 Identities=21% Similarity=0.415 Sum_probs=59.9
Q ss_pred CCCCCchhhc------CCCC-CCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcChhhhhhhccc
Q 019486 67 AIADDYYAVL------GLLP-DATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEI 135 (340)
Q Consensus 67 ~~~~d~Y~vL------gv~~-~as~~eIk~AYr~la~~~HPD~~~~~~~~~~~f~~i~~Ay~vLsdp~~R~~YD~~ 135 (340)
....|||+|| |+++ +++..+||++||+|+++||||++++ +.+.|..||+||+||+||.+|..||..
T Consensus 8 ~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~ 80 (181)
T 3uo3_A 8 RFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLK 80 (181)
T ss_dssp CCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 3567999999 4664 8999999999999999999999886 678899999999999999999999985
No 32
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.52 E-value=2.1e-15 Score=122.71 Aligned_cols=60 Identities=12% Similarity=0.138 Sum_probs=52.5
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC---Ch----HHHHHHHHHHHHHHHhcChh
Q 019486 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGD---DP----ETTNFCMFINEVYAVLSDPV 127 (340)
Q Consensus 67 ~~~~d~Y~vLgv~~~as~~eIk~AYr~la~~~HPD~~~~---~~----~~~~~f~~i~~Ay~vLsdp~ 127 (340)
+...|||+|||++. ||.++||+|||+++++||||++++ ++ .+++.|+.|++||+||+|+.
T Consensus 38 ~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 38 WSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp CTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 34579999999996 999999999999999999999763 12 35789999999999999985
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.48 E-value=4.5e-15 Score=156.72 Aligned_cols=70 Identities=27% Similarity=0.477 Sum_probs=40.6
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcChhhhhhhcccc
Q 019486 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (340)
Q Consensus 67 ~~~~d~Y~vLgv~~~as~~eIk~AYr~la~~~HPD~~~~~~~~~~~f~~i~~Ay~vLsdp~~R~~YD~~~ 136 (340)
....|||+||||+++||.++||+|||+|++++|||++++++++.+.|+.|++||++|+||.+|..||.++
T Consensus 18 ~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~ 87 (780)
T 3apo_A 18 RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYG 87 (780)
T ss_dssp -----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC-
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhc
Confidence 3567999999999999999999999999999999999877888999999999999999999999999876
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.86 E-value=1.6e-09 Score=103.48 Aligned_cols=65 Identities=32% Similarity=0.490 Sum_probs=55.5
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCC---hHHHHHHHHHHHHHHHhcChhhhhhhcc
Q 019486 70 DDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDD---PETTNFCMFINEVYAVLSDPVQRMVYDE 134 (340)
Q Consensus 70 ~d~Y~vLgv~~~as~~eIk~AYr~la~~~HPD~~~~~---~~~~~~f~~i~~Ay~vLsdp~~R~~YD~ 134 (340)
.++|.+||+...++.++|+++|+++++++|||+.+.. ..+.+.|..|++||++|+||.+|..||.
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 4899999999999999999999999999999998763 2378899999999999999999999996
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.84 E-value=2.8e-09 Score=78.95 Aligned_cols=52 Identities=10% Similarity=0.106 Sum_probs=46.1
Q ss_pred CCchhhcCCCCC---CCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcC
Q 019486 70 DDYYAVLGLLPD---ATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSD 125 (340)
Q Consensus 70 ~d~Y~vLgv~~~---as~~eIk~AYr~la~~~HPD~~~~~~~~~~~f~~i~~Ay~vLsd 125 (340)
.+-|.||||+++ ++.++|+++||+|+..+|||+.+. ...+.+|++|+++|..
T Consensus 4 ~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS----~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 4 DESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGS----FYLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCC----HHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHHHH
Confidence 357899999999 999999999999999999999654 6777899999999964
No 36
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=98.49 E-value=4.6e-08 Score=74.36 Aligned_cols=60 Identities=32% Similarity=0.592 Sum_probs=47.0
Q ss_pred ccccccccccCCCCcccCCCCcccccccCCceEEccC---------CCCHHHHHHHHHcCCccceecccc
Q 019486 155 HVFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQ---------CGINEFVQQAIESCPVDCIHRTSA 215 (340)
Q Consensus 155 ~vfvDe~~CiGCg~C~~v~P~~F~iedd~G~a~vv~q---------~g~~E~v~eAv~~CPv~cI~~~~~ 215 (340)
.+.+|...|+|||.|..+||..|.++++ |...+..+ .+.+..+..++..||++||++...
T Consensus 3 ~v~vd~~~CigCg~C~~~CP~~~~~~~~-g~~~~~~~~~~~~~~~~~~~c~~C~~C~~~CP~~AI~~~~~ 71 (81)
T 1iqz_A 3 YTIVDKETCIACGACGAAAPDIYDYDED-GIAYVTLDDNQGIVEVPDILIDDMMDAFEGCPTDSIKVADE 71 (81)
T ss_dssp EEEECTTTCCCCSHHHHHCTTTEEECTT-SCEEETTTTTSSCSCCCGGGHHHHHHHHHHCTTCCEEEESS
T ss_pred EEEEecccCcccChhhHhCchheeeCCC-CeEEEeccCccccCCCCHHHHHHHHHHHHhCCHhHEEEecC
Confidence 3568899999999999999999988755 66665532 223556788999999999998653
No 37
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=98.31 E-value=3.4e-07 Score=66.00 Aligned_cols=60 Identities=33% Similarity=0.776 Sum_probs=46.1
Q ss_pred ccccccccccCCCCcccCCCCcccccccCCceEEccC-CCCHHHHHHHHHcCCccceeccc
Q 019486 155 HVFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQ-CGINEFVQQAIESCPVDCIHRTS 214 (340)
Q Consensus 155 ~vfvDe~~CiGCg~C~~v~P~~F~iedd~G~a~vv~q-~g~~E~v~eAv~~CPv~cI~~~~ 214 (340)
.+.+|...|+|||.|..+||+.|.++++.|...++.. ...+.....++..||++||.+.+
T Consensus 3 ~~~id~~~C~~Cg~C~~~CP~~~~~~~~~~~~~~~~~~~~~C~~C~~C~~~CP~~Ai~~~~ 63 (64)
T 1dax_A 3 KFYVDQDECIACESCVEIAPGAFAMDPEIEKAYVKDVEGASQEEVEEAMDTCPVQCIHWED 63 (64)
T ss_dssp CCEECSTTCCSCCHHHHHCTTTEEECSSSSSEEECCGGGSCHHHHHHHHHHSSSCCEECCC
T ss_pred EEEEccccCCCchHHHHhCCccEeEcCCCCEEEEecCCCcchhHHHHHHHhCCHhhEeeec
Confidence 3567888999999999999988887654355554431 34566778899999999999764
No 38
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=98.25 E-value=6.2e-07 Score=63.25 Aligned_cols=57 Identities=37% Similarity=0.712 Sum_probs=41.4
Q ss_pred cccccccccCCCCcccCCCCcccccccCCceEEccCCCCHHHHHHHHHcCCccceecc
Q 019486 156 VFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRT 213 (340)
Q Consensus 156 vfvDe~~CiGCg~C~~v~P~~F~iedd~G~a~vv~q~g~~E~v~eAv~~CPv~cI~~~ 213 (340)
+.+|...|++|+.|..+||..|.++++ |...++.....+.....++..||++||.+.
T Consensus 3 ~~i~~~~C~~C~~C~~~Cp~~~~~~~~-~~~~~~~~~~~c~~C~~C~~~CP~~Ai~~~ 59 (60)
T 1rof_A 3 VRVDADACIGCGVCENLCPDVFQLGDD-GKAKVLQPETDLPCAKDAADSCPTGAISVE 59 (60)
T ss_dssp SEECTTTCCSCCSSTTTCTTTBCCCSS-SCCCBSCSSCCSTTHHHHHHHCTTCCEECC
T ss_pred EEEchhhCCCChHHHHhCcHHHeECCC-CCEeecCchhhHHHHHHHHHhCCHhHEEEe
Confidence 467888999999999999988777654 544443212223334569999999999975
No 39
>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A 3pni_A
Probab=98.15 E-value=6.2e-07 Score=64.49 Aligned_cols=58 Identities=31% Similarity=0.629 Sum_probs=43.6
Q ss_pred ccccccccccCCCCcccCCCCcccccccCCceEEccCC-CC---HHHHHHHHHcCCccceecc
Q 019486 155 HVFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQC-GI---NEFVQQAIESCPVDCIHRT 213 (340)
Q Consensus 155 ~vfvDe~~CiGCg~C~~v~P~~F~iedd~G~a~vv~q~-g~---~E~v~eAv~~CPv~cI~~~ 213 (340)
.+.+|...|+||+.|..+||..|.++++ |...++... .+ ......++..||++||.+.
T Consensus 3 ~~~id~~~C~~C~~C~~~Cp~~~~~~~~-~~~~~~~~~~~~~~~c~~c~~C~~~CP~~Ai~~~ 64 (66)
T 1sj1_A 3 KVSVDQDTCIGDAICASLCPDVFEMNDE-GKAQPKVEVIEDEELYNCAKEAMEACPVSAITIE 64 (66)
T ss_dssp EEEECTTTCCCCCHHHHHCTTTEEECTT-SCEEESCSCBCCHHHHHHHHHHHHHCTTCCEEEE
T ss_pred EEEECcccCcCchHHHHhCCceEEECCC-CceeecccCCCcHHHHHHHHHHHhhCCHhhEEEe
Confidence 3567889999999999999988877644 655555421 12 3456789999999999975
No 40
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=98.12 E-value=1.1e-06 Score=61.89 Aligned_cols=55 Identities=33% Similarity=0.710 Sum_probs=41.3
Q ss_pred cccccccccCCCCcccCCCCcccccccCCceEEcc-CCCCHHHHHHHHHcCCccceec
Q 019486 156 VFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYN-QCGINEFVQQAIESCPVDCIHR 212 (340)
Q Consensus 156 vfvDe~~CiGCg~C~~v~P~~F~iedd~G~a~vv~-q~g~~E~v~eAv~~CPv~cI~~ 212 (340)
+.+| ..|++|+.|..+||..|.++++ |...++. ....+.....++..||++||.+
T Consensus 2 v~id-~~C~~C~~C~~~CP~~~~~~~~-~~~~~~~~~~~~C~~C~~C~~~CP~~Ai~~ 57 (58)
T 1f2g_A 2 IEVN-DDCMACEACVEICPDVFEMNEE-GDKAVVINPDSDLDCVEEAIDSCPAEAIVR 57 (58)
T ss_dssp CBCT-TTCCCCCHHHHHCTTTEEECSS-SSSEEESCTTCCSTHHHHHHHTCSSCCCBC
T ss_pred cEEC-CcCccchHHHHhCCccEEECCC-CcEEEeCCCccchHHHHHHHhhCChhhEEe
Confidence 4567 8899999999999998877654 5544444 1233445677999999999986
No 41
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=98.07 E-value=1.2e-06 Score=61.60 Aligned_cols=58 Identities=34% Similarity=0.716 Sum_probs=40.9
Q ss_pred cccccccccCCCCcccCCCCcccccccCCceEEccCCCCHHHHHHHHHcCCccceecc
Q 019486 156 VFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRT 213 (340)
Q Consensus 156 vfvDe~~CiGCg~C~~v~P~~F~iedd~G~a~vv~q~g~~E~v~eAv~~CPv~cI~~~ 213 (340)
+.+|...|++|+.|..+||..|.++++.|...++.....+.....++..||++||.++
T Consensus 2 i~i~~~~C~~C~~C~~~Cp~~~~~~~~~~~~~~~~~~~~c~~C~~C~~~CP~~Ai~~~ 59 (59)
T 1dwl_A 2 IVIDHEECIGCESCVELCPEVFAMIDGEEKAMVTAPDSTAECAQDAIDACPVEAISKE 59 (59)
T ss_dssp EEESSCCCSSCCGGGGTSTTTEEEEECSSCEEESCTTCCCGGGGTGGGGSTTCCEEEC
T ss_pred eEEChhhCcChhHHHHHCCHHheecCCCCcEEEecChhhhhHHHHHHHhCCHhhEEcC
Confidence 4568888999999999999878773232655542122223345569999999999863
No 42
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica} SCOP: d.58.1.1
Probab=97.53 E-value=0.00014 Score=54.50 Aligned_cols=69 Identities=17% Similarity=0.307 Sum_probs=41.8
Q ss_pred ccccccccCCCCcccCCCCc-ccccccCCceEEc-cCCCCHH---HHHHHHHcCCccceecccccchhhhHHHHHHH
Q 019486 157 FVDEFSCIGCKNCNNVAPEV-FKIEEDFGRARVY-NQCGINE---FVQQAIESCPVDCIHRTSAQQLSLLEDEMRRV 228 (340)
Q Consensus 157 fvDe~~CiGCg~C~~v~P~~-F~iedd~G~a~vv-~q~g~~E---~v~eAv~~CPv~cI~~~~~~~l~~Le~~~~~~ 228 (340)
+++...|++|+.|..+||.. +.++++ ...+. ..+..+. ....++..||++||.+......+ .+.+|+++
T Consensus 2 ~~~~~~C~~C~~C~~~CP~~ai~~~~~--~~~~~~~~C~~C~~~~~~~~C~~~CP~~Ai~~~~~~~~~-~~~~~~~~ 75 (80)
T 1rgv_A 2 LYINDDCTACDACVEECPNEAITPGDP--IYVIDPTKCSECVGAFDEPQCRLVCPADCIPDNPDYRET-REELQEKY 75 (80)
T ss_dssp BCCCSCCCCCCTTTTTCTTCCEECCSS--SCEECTTTCCTTTTTCSSCHHHHHCSSCCCCBCGGGCCC-HHHHHHHH
T ss_pred eEeCCCCcChhhHHHHcChhccCcCCC--eeEEcchhCcCCCCcCCccHHHHhcCcccEEecCCcccC-HHHHHHHH
Confidence 45677899999999999965 555433 22221 2233332 00049999999999987543222 34444443
No 43
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=97.52 E-value=0.00012 Score=55.11 Aligned_cols=70 Identities=26% Similarity=0.364 Sum_probs=42.5
Q ss_pred ccccccccCCCCcccCCCCc-ccccccCCceEEc-cCCCCHH---HHHHHHHcCCccceecccccchhhhHHHHHHHh
Q 019486 157 FVDEFSCIGCKNCNNVAPEV-FKIEEDFGRARVY-NQCGINE---FVQQAIESCPVDCIHRTSAQQLSLLEDEMRRVE 229 (340)
Q Consensus 157 fvDe~~CiGCg~C~~v~P~~-F~iedd~G~a~vv-~q~g~~E---~v~eAv~~CPv~cI~~~~~~~l~~Le~~~~~~~ 229 (340)
+++...|++|+.|..+||.. +.+++ +...+. ..+..+. ....++..||++||.+......+ .+.+|+++.
T Consensus 2 ~~~~~~C~~C~~C~~~CP~~ai~~~~--~~~~~~~~~C~~C~~~~~~~~C~~~CP~~Ai~~~~~~~~~-~~~~~~~~~ 76 (82)
T 2fgo_A 2 LKITDDCINCDVCEPECPNGAISQGE--EIYVIDPNLCTECVGHYDEPQCQQVCPVDCIPLDDANVES-KDQLMEKYR 76 (82)
T ss_dssp BCCCTTCCCCCTTGGGCTTCCEEECS--SSEEECTTTCCTTTTTCSSCHHHHHCTTCCCCBCTTSCCC-HHHHHHHHH
T ss_pred ceeCCCCCChhhHHHHCChhccCCCC--CeEEEEchhCccCCCcCCCCHhHhhCCcccEEccCCCccC-HHHHHHHHH
Confidence 45678899999999999955 44543 222221 1233332 00149999999999987654333 345555443
No 44
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron-SULF clusters, reduction potential; 1.65A {Escherichia coli}
Probab=97.42 E-value=0.00018 Score=54.73 Aligned_cols=70 Identities=16% Similarity=0.341 Sum_probs=42.5
Q ss_pred ccccccccCCCCcccCCCCc-ccccccCCceEEc-cCCCCHH---HHHHHHHcCCc-cceecccccchhhhHHHHHHHh
Q 019486 157 FVDEFSCIGCKNCNNVAPEV-FKIEEDFGRARVY-NQCGINE---FVQQAIESCPV-DCIHRTSAQQLSLLEDEMRRVE 229 (340)
Q Consensus 157 fvDe~~CiGCg~C~~v~P~~-F~iedd~G~a~vv-~q~g~~E---~v~eAv~~CPv-~cI~~~~~~~l~~Le~~~~~~~ 229 (340)
+++...|++|+.|..+||.. +.+++ +...+. ..+..+. ..-.++..||+ +||.+......+. +.+|+++.
T Consensus 2 ~~~~~~C~~C~~C~~~CP~~ai~~~~--~~~~~~~~~C~~C~~~~~~~~C~~~CP~~~Ai~~~~~~~~~~-~~~~~~~~ 77 (85)
T 2zvs_A 2 LLITKKCINCDMCEPECPNEAISMGD--HIYEINSDKCTECVGHYETPTCQKVCPIPNTIVKDPAHVETE-EQLWDKFV 77 (85)
T ss_dssp EEECTTCCCCCTTTTTCTTCCEECCS--SSCEECGGGCCTTTTTCSSCHHHHHCSSCCEEECTTSCCCHH-HHHHHHHH
T ss_pred EEeCCcCcChhHHHHHCchhccCcCC--CceEEeChhccCCCCcCCccHhhHhCcCCCCEEecCCCCCCH-HHHHHHHH
Confidence 45678899999999999965 44443 222221 2233332 00048999999 9999876543333 44554443
No 45
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} SCOP: d.58.1.1 PDB: 1blu_A 3exy_A
Probab=97.34 E-value=0.00025 Score=53.57 Aligned_cols=57 Identities=23% Similarity=0.409 Sum_probs=37.4
Q ss_pred ccccccccCCCCcccCCCCcc-cccccCCceEEcc-CCCCHH---HHHHHHHcCCccceecccc
Q 019486 157 FVDEFSCIGCKNCNNVAPEVF-KIEEDFGRARVYN-QCGINE---FVQQAIESCPVDCIHRTSA 215 (340)
Q Consensus 157 fvDe~~CiGCg~C~~v~P~~F-~iedd~G~a~vv~-q~g~~E---~v~eAv~~CPv~cI~~~~~ 215 (340)
+++...|++|+.|..+||... .+++ +...+.. .+..+. ..-.++..||++||.+...
T Consensus 2 ~~~~~~C~~C~~C~~~CP~~ai~~~~--~~~~i~~~~C~~C~~~~~~~~C~~~CP~~Ai~~~~~ 63 (82)
T 3eun_A 2 LMITDECINCDVCEPECPNGAISQGD--ETYVIEPSLCTECVGHYETSQCVEVCPVDAIIKDPS 63 (82)
T ss_dssp EEECTTCCCCCTTGGGCTTCCEEECS--SSEEECGGGCCTTTTTCSSCHHHHHCTTCCEEECGG
T ss_pred eEeCCCCcCccchHHHCChhheEcCC--CceEEchhhcCCCCCCCCccHHHHhCCccceEEcCC
Confidence 467788999999999999754 4433 3322222 233332 0004999999999998754
No 46
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=97.18 E-value=3.6e-05 Score=60.43 Aligned_cols=57 Identities=32% Similarity=0.480 Sum_probs=38.3
Q ss_pred ccccccccccCCCCcccCCC-CcccccccCCc------eEEccC--CCCHHHHHHHHHcCCccceeccc
Q 019486 155 HVFVDEFSCIGCKNCNNVAP-EVFKIEEDFGR------ARVYNQ--CGINEFVQQAIESCPVDCIHRTS 214 (340)
Q Consensus 155 ~vfvDe~~CiGCg~C~~v~P-~~F~iedd~G~------a~vv~q--~g~~E~v~eAv~~CPv~cI~~~~ 214 (340)
.+.+|...|++|+.|..+|| ..+.+.+..+. ...+.. +.. +..|+..||++||.+..
T Consensus 37 ~~~id~~~C~~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~~~~C~~---Cg~C~~~CP~~Ai~~~~ 102 (103)
T 1xer_A 37 IVGVDFDLCIADGSCINACPVNVFQWYDTPGHPASEKKADPVNEQACIF---CMACVNVCPVAAIDVKP 102 (103)
T ss_dssp SEEEETTTCCCCCHHHHHCTTCCCEEEECTTCSSCSEEEECTTGGGCCC---CCHHHHHCTTCCEEECC
T ss_pred eEEEehhhCCChhhHHHHcCccCeecccccCccccccceeecCcccccC---hhhHHHhccccceEecC
Confidence 46688899999999999999 45555443221 111211 332 33599999999999754
No 47
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=96.99 E-value=0.00069 Score=50.28 Aligned_cols=55 Identities=24% Similarity=0.334 Sum_probs=36.6
Q ss_pred ccccccccC--CCCcccCCCCcc-cccccCCceEEccC-CCCHHHHHHHHHcCCccceeccccc
Q 019486 157 FVDEFSCIG--CKNCNNVAPEVF-KIEEDFGRARVYNQ-CGINEFVQQAIESCPVDCIHRTSAQ 216 (340)
Q Consensus 157 fvDe~~CiG--Cg~C~~v~P~~F-~iedd~G~a~vv~q-~g~~E~v~eAv~~CPv~cI~~~~~~ 216 (340)
+++...|++ |+.|..+||... .+++ +...+... +..+. .++..||++||.+....
T Consensus 2 ~i~~~~C~~c~C~~C~~~Cp~~ai~~~~--~~~~~~~~~C~~Cg---~C~~~CP~~ai~~~~~~ 60 (77)
T 1bc6_A 2 YVITEPCIGTKDASCVEVCPVDCIHEGE--DQYYIDPDVCIDCG---ACEAVCPVSAIYHEDFV 60 (77)
T ss_dssp EECCSTTTTCCCCSSTTTCTTCCEEECS--SSEEECTTTCCSCC---SHHHHSGGGSSEETTTS
T ss_pred EEeCccCCCCCcchhHHhcccccEEeCC--CcEEECcccCcCcc---CCHhhcCccceEecCCC
Confidence 467788999 899999999764 3432 33222222 33333 38899999999986543
No 48
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=96.92 E-value=6.6e-05 Score=55.88 Aligned_cols=60 Identities=18% Similarity=0.274 Sum_probs=37.7
Q ss_pred cccccccccCCCCcccCCC-CcccccccCC---ceE-EccCCCCHHHHHHHHHcCCccceecccc
Q 019486 156 VFVDEFSCIGCKNCNNVAP-EVFKIEEDFG---RAR-VYNQCGINEFVQQAIESCPVDCIHRTSA 215 (340)
Q Consensus 156 vfvDe~~CiGCg~C~~v~P-~~F~iedd~G---~a~-vv~q~g~~E~v~eAv~~CPv~cI~~~~~ 215 (340)
++++...|++|+.|..+|| ..+.+++..+ ... .......+..+..++..||++||.+...
T Consensus 3 ~~~~~~~C~~Cg~C~~~CP~~a~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~CP~~ai~~~~~ 67 (80)
T 1jb0_C 3 TVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASSPRTEDCVGCKRCETACPTDFLSIRVY 67 (80)
T ss_dssp EEEEETTCCCCCHHHHHCTTCCCEEEECSSSTTSEEEECTTGGGCCCCCHHHHHCCSSSCSEEEE
T ss_pred CcccCCcCcChhHHHHHCCcccccccccccccccccccCCCCCcCcCcCChhhhCCCCccEeeee
Confidence 4567788999999999999 4566654213 111 1111111222345999999999997543
No 49
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=96.75 E-value=0.00051 Score=54.34 Aligned_cols=54 Identities=24% Similarity=0.384 Sum_probs=37.4
Q ss_pred ccccccccCCC--CcccCCCCcc-cccccCCceEEccC-CCCHHHHHHHHHcCCccceecccc
Q 019486 157 FVDEFSCIGCK--NCNNVAPEVF-KIEEDFGRARVYNQ-CGINEFVQQAIESCPVDCIHRTSA 215 (340)
Q Consensus 157 fvDe~~CiGCg--~C~~v~P~~F-~iedd~G~a~vv~q-~g~~E~v~eAv~~CPv~cI~~~~~ 215 (340)
++|...|++|+ .|..+||... .+++ +...+... +..+. .|+..||++||.+...
T Consensus 2 ~~~~~~C~~C~~~~C~~~CP~~ai~~~~--~~~~i~~~~C~~Cg---~C~~~CP~~ai~~~~~ 59 (106)
T 7fd1_A 2 FVVTDNCIKCKYTDCVEVCPVDCFYEGP--NFLVIHPDECIDCA---LCEPECPAQAIFSEDE 59 (106)
T ss_dssp EEECGGGTTTCCCHHHHHCTTCCEEECS--SCEEECTTTCCCCC---TTGGGCTTCCEEEGGG
T ss_pred eECccccCCccCcHHHHHcCccceEcCC--CcEEECcccCCChh---hhHHhCCChhhhcccc
Confidence 56788999999 9999999654 3433 33232222 44333 3899999999998754
No 50
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=96.71 E-value=0.00079 Score=50.13 Aligned_cols=55 Identities=22% Similarity=0.328 Sum_probs=37.2
Q ss_pred ccccccccC--CCCcccCCCCc-ccccccCCceEEccC-CCCHHHHHHHHHcCCccceeccccc
Q 019486 157 FVDEFSCIG--CKNCNNVAPEV-FKIEEDFGRARVYNQ-CGINEFVQQAIESCPVDCIHRTSAQ 216 (340)
Q Consensus 157 fvDe~~CiG--Cg~C~~v~P~~-F~iedd~G~a~vv~q-~g~~E~v~eAv~~CPv~cI~~~~~~ 216 (340)
+++...|++ |+.|..+||.. +.+++ +...+... +..+. .++..||++||.+....
T Consensus 2 ~i~~~~C~~c~C~~C~~~CP~~ai~~~~--~~~~~~~~~C~~C~---~C~~~CP~~Ai~~~~~~ 60 (78)
T 1h98_A 2 HVICEPCIGVKDQSCVEVCPVECIYDGG--DQFYIHPEECIDCG---ACVPACPVNAIYPEEDV 60 (78)
T ss_dssp EEECGGGTTTCCCHHHHHCTTCCEEECS--SSEEECTTTCCCCC---THHHHCTTCCEEEGGGC
T ss_pred EEEchhCCCCCcChhhhhcCccceEcCC--CEEEECcccCCcHh---HHHHhCCccceEecccC
Confidence 467788999 99999999975 44543 33222222 33333 48999999999986543
No 51
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=96.67 E-value=0.0012 Score=45.59 Aligned_cols=48 Identities=23% Similarity=0.401 Sum_probs=32.4
Q ss_pred cccccCCCCcccCCCCccc-ccccCCceEEccC-CCCHHHHHHHHHcCCccceec
Q 019486 160 EFSCIGCKNCNNVAPEVFK-IEEDFGRARVYNQ-CGINEFVQQAIESCPVDCIHR 212 (340)
Q Consensus 160 e~~CiGCg~C~~v~P~~F~-iedd~G~a~vv~q-~g~~E~v~eAv~~CPv~cI~~ 212 (340)
...|++|+.|..+||.... +++ +...+... +..+ ..++..||++||.+
T Consensus 5 ~~~C~~C~~C~~~CP~~ai~~~~--~~~~~~~~~C~~C---~~C~~~CP~~ai~~ 54 (55)
T 2fdn_A 5 NEACISCGACEPECPVNAISSGD--DRYVIDADTCIDC---GACAGVCPVDAPVQ 54 (55)
T ss_dssp CTTCCCCCTTGGGCTTCCEECCS--SSCEECTTTCCCC---CHHHHTCTTCCEEE
T ss_pred cccCcChhhHHHHCCccccCcCC--CEEEeccccCcCh---hChHHHccccceec
Confidence 5679999999999997653 333 32222221 3333 34899999999986
No 52
>3gyx_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.63 E-value=0.00021 Score=61.90 Aligned_cols=60 Identities=23% Similarity=0.449 Sum_probs=41.8
Q ss_pred cccccccccCCC-----CcccCCCCc-ccccccCCceEEcc--CCCCHHHHHHHHHcCCccceecccccch
Q 019486 156 VFVDEFSCIGCK-----NCNNVAPEV-FKIEEDFGRARVYN--QCGINEFVQQAIESCPVDCIHRTSAQQL 218 (340)
Q Consensus 156 vfvDe~~CiGCg-----~C~~v~P~~-F~iedd~G~a~vv~--q~g~~E~v~eAv~~CPv~cI~~~~~~~l 218 (340)
+++|...|++|+ .|..+||.. +.++++.+....+. .+..+. .|+..||++||.+....++
T Consensus 2 v~id~~~C~gC~~c~~~~C~~~CP~~ai~~~~~~~~~~~~d~~~C~~Cg---~Cv~~CP~~Ai~~~~~~~~ 69 (166)
T 3gyx_B 2 TYVDPSKCDGCKGGEKTACMYICPNDLMILDPEEMKAFNQEPEACWECY---SCIKICPQGAITARPYADF 69 (166)
T ss_dssp EEECTTTCCCCCSSSCCHHHHHCTTSCEEEETTTTEEEESCGGGCCCCC---HHHHHCSSCCEEECCCTTT
T ss_pred CEEcchhcCCCCCCCcchhHHhCCccccEEecCCceeEecCcccCcccC---hHhHhCCccceEEeccccc
Confidence 467889999999 999999975 44555423233333 244443 4999999999998766443
No 53
>1jnr_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.1.5 PDB: 1jnz_B* 2fja_B* 2fjb_B* 2fjd_B* 2fje_B*
Probab=96.60 E-value=0.00023 Score=60.51 Aligned_cols=60 Identities=22% Similarity=0.459 Sum_probs=41.5
Q ss_pred cccccccccCCC-----CcccCCCCc-ccccccCCceEEccC--CCCHHHHHHHHHcCCccceecccccch
Q 019486 156 VFVDEFSCIGCK-----NCNNVAPEV-FKIEEDFGRARVYNQ--CGINEFVQQAIESCPVDCIHRTSAQQL 218 (340)
Q Consensus 156 vfvDe~~CiGCg-----~C~~v~P~~-F~iedd~G~a~vv~q--~g~~E~v~eAv~~CPv~cI~~~~~~~l 218 (340)
++++...|++|+ .|..+||.. +.++++.+...++.. +..+. .|+..||++||.+....++
T Consensus 3 ~~vd~~~C~~C~~~~~~~C~~~CP~~ai~~~~~~~~~~~id~~~C~~Cg---~Cv~~CP~~AI~~~~~~~~ 70 (150)
T 1jnr_B 3 SFVNPEKCDGCKALERTACEYICPNDLMTLDKEKMKAYNREPDMCWECY---SCVKMCPQGAIDVRGYVDY 70 (150)
T ss_dssp EEECTTTCCSCCSSSSCHHHHHCTTSCEEEETTTTEEEESCGGGCCCCC---HHHHHCTTCCEEECCCTTT
T ss_pred eEECcccCCCCCCcccccchhhcCccCeEEecCCceeeeeCcccCcCHh---HHHHhCCccceEecCcchh
Confidence 467888999999 999999965 445544223333332 44443 4999999999998765433
No 54
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=96.28 E-value=0.0011 Score=56.84 Aligned_cols=54 Identities=22% Similarity=0.369 Sum_probs=34.7
Q ss_pred ccccccCCCCcccCCCCccc-ccccCC-------------ceEEc--cCCCCHHHHHHHHHcCCccceecccc
Q 019486 159 DEFSCIGCKNCNNVAPEVFK-IEEDFG-------------RARVY--NQCGINEFVQQAIESCPVDCIHRTSA 215 (340)
Q Consensus 159 De~~CiGCg~C~~v~P~~F~-iedd~G-------------~a~vv--~q~g~~E~v~eAv~~CPv~cI~~~~~ 215 (340)
|...|++|+.|..+||.... ++.... ....+ ..|..|. .|+..||++||.+...
T Consensus 49 d~~~Ci~C~~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~---~C~~~CP~~Ai~~~~~ 118 (182)
T 3i9v_9 49 GLEKCIGCSLCAAACPAYAIYVEPAENDPENPVSAGERYAKVYEINMLRCIFCG---LCEEACPTGAIVLGYD 118 (182)
T ss_dssp SCBSCCCCCHHHHHCTTCCEEEEEECCCSSSCSSSSSCEEEEEEEETTTCCCCC---HHHHHCSSSCEEECSC
T ss_pred CCccCcccccchhhCCcccEEeecccccccccccccccccceeecCCCcCcChh---ChhhhCCccceEecCc
Confidence 56789999999999996532 221100 01111 1244443 4999999999998754
No 55
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.11 E-value=0.0011 Score=72.43 Aligned_cols=58 Identities=24% Similarity=0.546 Sum_probs=42.1
Q ss_pred ccccccccccCCCCcccCCC----CcccccccCCceEEccCCCCHHHHHHHHHcCCc-cceecccc
Q 019486 155 HVFVDEFSCIGCKNCNNVAP----EVFKIEEDFGRARVYNQCGINEFVQQAIESCPV-DCIHRTSA 215 (340)
Q Consensus 155 ~vfvDe~~CiGCg~C~~v~P----~~F~iedd~G~a~vv~q~g~~E~v~eAv~~CPv-~cI~~~~~ 215 (340)
.+.+|+..|++|+.|..+|| ..+.++++.+...+...|..|. .|+..||+ +||.++..
T Consensus 945 ~~~id~~~C~~Cg~C~~~CP~~~~~ai~~~~~~~~~~~~~~C~~Cg---~C~~~CP~~~Ai~~~~~ 1007 (1025)
T 1gte_A 945 VAVIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVTDTCTGCT---LCLSVCPIIDCIRMVSR 1007 (1025)
T ss_dssp EEEECTTTCCCCCHHHHHHHHHSCSCEEECTTTCCEEECTTCCCCC---HHHHHCSSTTTEEEEEC
T ss_pred eEEEEcccCcccCHHHHhcCccccCCEEEeCCCceEEeCccCCChh---HHHhhCCCCCCEEEecC
Confidence 45689999999999999999 5566665433333333355444 49999999 99998754
No 56
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=96.05 E-value=0.0016 Score=51.24 Aligned_cols=55 Identities=18% Similarity=0.265 Sum_probs=36.7
Q ss_pred ccccccccCC--CCcccCCCCc-ccccccCCceEEcc-CCCCHHHHHHHHHcCCccceeccccc
Q 019486 157 FVDEFSCIGC--KNCNNVAPEV-FKIEEDFGRARVYN-QCGINEFVQQAIESCPVDCIHRTSAQ 216 (340)
Q Consensus 157 fvDe~~CiGC--g~C~~v~P~~-F~iedd~G~a~vv~-q~g~~E~v~eAv~~CPv~cI~~~~~~ 216 (340)
+++...|++| +.|..+||.. +.+++ +...+.. .+..+. .++..||++||.+....
T Consensus 2 ~i~~~~C~~C~c~~C~~~CP~~ai~~~~--~~~~~~~~~C~~Cg---~C~~~CP~~Ai~~~~~~ 60 (105)
T 2v2k_A 2 YVIAEPCVDVKDKACIEECPVDCIYEGA--RMLYIHPDECVDCG---ACEPVCPVEAIYYEDDV 60 (105)
T ss_dssp EEECGGGTTTCCCHHHHHCTTCCEEECS--SCEEECTTTCCCCC---CSGGGCTTCCEEEGGGC
T ss_pred EEecccCCCCCcChhhhhcCccccCcCC--CcEEEeCCcCcchh---hHHHhCCccCEEecCCC
Confidence 4677889988 9999999965 44443 2222221 133332 38999999999987543
No 57
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=95.89 E-value=0.00058 Score=67.51 Aligned_cols=54 Identities=30% Similarity=0.603 Sum_probs=38.0
Q ss_pred ccccccccccCCCCcccCCCCcccccccCCceEEc-c--CCCCHHHHHHHHHcCCccceec
Q 019486 155 HVFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVY-N--QCGINEFVQQAIESCPVDCIHR 212 (340)
Q Consensus 155 ~vfvDe~~CiGCg~C~~v~P~~F~iedd~G~a~vv-~--q~g~~E~v~eAv~~CPv~cI~~ 212 (340)
.+.+|...|++|+.|..+||.......+ |....+ . .|..|. .|+..||++||.+
T Consensus 27 ~i~~d~~kCi~Cg~C~~~CP~~ai~~~~-~~~~~i~~~~~C~~Cg---~C~~~CP~~Ai~~ 83 (421)
T 1hfe_L 27 FVQIDEAKCIGCDTCSQYCPTAAIFGEM-GEPHSIPHIEACINCG---QCLTHCPENAIYE 83 (421)
T ss_dssp SEEECTTTCCCCCHHHHHCTTCCCBCCT-TSCCBCCCGGGCCCCC---TTGGGCTTCCEEE
T ss_pred eEEECcccCCCccHHHHhcCcCceeccc-ccceeecChhhCCchh---hHHHhhCcCCccc
Confidence 5678899999999999999976433222 432223 2 244333 4899999999998
No 58
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=95.72 E-value=0.0026 Score=59.82 Aligned_cols=60 Identities=23% Similarity=0.479 Sum_probs=38.5
Q ss_pred ccccccccccCCCCcccCCCCc-ccccccCCceEEccCCCCHH-HHH-----HHHHcCCccceecccccc
Q 019486 155 HVFVDEFSCIGCKNCNNVAPEV-FKIEEDFGRARVYNQCGINE-FVQ-----QAIESCPVDCIHRTSAQQ 217 (340)
Q Consensus 155 ~vfvDe~~CiGCg~C~~v~P~~-F~iedd~G~a~vv~q~g~~E-~v~-----eAv~~CPv~cI~~~~~~~ 217 (340)
.+.+|...|++|+.|...||.. +.++...+.. ..+..+. .+. .|+..||++||.+.+.++
T Consensus 125 ~v~id~~~CigCg~C~~~CP~~ai~~~~~~~~~---~kC~~C~~r~~~g~~p~Cv~~CP~~Ai~~~~~~~ 191 (294)
T 1kqf_B 125 IVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRV---YKCTLCVDRVSVGQEPACVKTCPTGAIHFGTKKE 191 (294)
T ss_dssp CEEECGGGCCCCCHHHHHCTTCCCEEETTTTEE---ECCCTTHHHHTTTCCCHHHHHCTTSCEEEEEHHH
T ss_pred ceEeCcccCCCcchhhhcCCCCCcEecCCCCCe---eeCCCccchhhcCccHHHHHhCCcCcEEEecHHH
Confidence 3567888999999999999964 4454432321 2333332 111 689999999999865443
No 59
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=95.42 E-value=0.0055 Score=54.13 Aligned_cols=57 Identities=23% Similarity=0.426 Sum_probs=33.9
Q ss_pred ccccccccccCCCCcccCCCCc-ccccccCCceEEccCCCCHH-HHH-----HHHHcCCccceecccc
Q 019486 155 HVFVDEFSCIGCKNCNNVAPEV-FKIEEDFGRARVYNQCGINE-FVQ-----QAIESCPVDCIHRTSA 215 (340)
Q Consensus 155 ~vfvDe~~CiGCg~C~~v~P~~-F~iedd~G~a~vv~q~g~~E-~v~-----eAv~~CPv~cI~~~~~ 215 (340)
.+.+|...|++|+.|..+||.. +.++.+.+ ...+..+. .+. .++..||++||.+.+.
T Consensus 82 ~~~id~~~CigC~~C~~~CP~~Ai~~~~~~~----~~kC~~C~~~~~~g~~p~Cv~~CP~~Ai~~g~~ 145 (195)
T 2vpz_B 82 LVLVDPKKCIACGACIAACPYDARYLHPAGY----VSKCTFCAHRLEKGKVPACVETCPTYCRTFGDL 145 (195)
T ss_dssp CEEECTTTCCCCCHHHHHCTTCCCEECTTSS----EECCCTTHHHHHTTCCCHHHHSCTTCCEEEEET
T ss_pred ceeecCCCCCCcChhHhhCCCCCeEECCCCC----CccCcCcchHHhCCCCchhHhhCCcccEEEecc
Confidence 3456777888888888888854 34444423 22333332 111 3788888888887543
No 60
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=95.18 E-value=0.012 Score=54.88 Aligned_cols=61 Identities=15% Similarity=0.173 Sum_probs=42.3
Q ss_pred ccccccccccCCCCcccCCCCccc-ccccCCceEEccCCCCHH-HH------H---HHHHcCCccceecccccch
Q 019486 155 HVFVDEFSCIGCKNCNNVAPEVFK-IEEDFGRARVYNQCGINE-FV------Q---QAIESCPVDCIHRTSAQQL 218 (340)
Q Consensus 155 ~vfvDe~~CiGCg~C~~v~P~~F~-iedd~G~a~vv~q~g~~E-~v------~---eAv~~CPv~cI~~~~~~~l 218 (340)
.+.+|...|++|+.|..+||.... ++...+ +...+..+. .+ - .|+..||++||.+.+..+.
T Consensus 91 ~v~id~~~CigC~~C~~~CP~~Ai~~~~~~~---~~~kC~~C~~r~~~~~~~G~~P~Cv~~CP~~Ai~~~~~~dp 162 (274)
T 1ti6_B 91 IVLIDPEKAKGKKELLDTCPYGVMYWNEEEN---VAQKCTMCAHLLDDESWAPKMPRCAHNCGSFVYEFLKTTPE 162 (274)
T ss_dssp CEEECTTTTTTCGGGGGGCSSCCCEEETTTT---EEECCCTTHHHHTCTTCTTCSCHHHHHCSSCCEEEEEECHH
T ss_pred cEEechhhccchHHHHhhCccCCeEEEcccC---ccccCCCchhhhhhhccCCCCcchhhhCCcCceEEcCCCcH
Confidence 467889999999999999997643 333323 233454441 11 1 5999999999999876544
No 61
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=95.01 E-value=0.0021 Score=65.93 Aligned_cols=59 Identities=22% Similarity=0.428 Sum_probs=39.9
Q ss_pred ccccccccccCCCCcccCCCC-----cccccccCCceEE--------ccCCCCHHHHHHHHHcCCccceecccc
Q 019486 155 HVFVDEFSCIGCKNCNNVAPE-----VFKIEEDFGRARV--------YNQCGINEFVQQAIESCPVDCIHRTSA 215 (340)
Q Consensus 155 ~vfvDe~~CiGCg~C~~v~P~-----~F~iedd~G~a~v--------v~q~g~~E~v~eAv~~CPv~cI~~~~~ 215 (340)
.+.+|...|++|+.|..+||. .+.+.++ |.... +. ...|..+..|+..||++||.+...
T Consensus 139 ~i~~d~~kCi~Cg~Cv~~CP~~~~~~ai~~~~~-g~~~~i~~~~~~~i~-~~~Ci~Cg~Cv~~CP~gAi~~~~~ 210 (574)
T 3c8y_A 139 SLTVDRTKCLLCGRCVNACGKNTETYAMKFLNK-NGKTIIGAEDEKCFD-DTNCLLCGQCIIACPVAALSEKSH 210 (574)
T ss_dssp SEEEEGGGCCCCCHHHHHHHHHHSCCCSEEEEE-TTEEEEESGGGCCGG-GSSCCCCCHHHHHCSSTTEEECCC
T ss_pred cceeCcccCcCCCCccchhCchhcCCceeeccC-Cccceecccccceec-hhhCCcchhHHHhhccCCcccccc
Confidence 567899999999999999995 4444443 32211 11 112223445999999999998764
No 62
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=94.86 E-value=0.0033 Score=66.72 Aligned_cols=59 Identities=25% Similarity=0.434 Sum_probs=38.2
Q ss_pred ccccccccccCCCCcccCCCCc-----ccccccCCceEEccC---CCCHHHHHHHHHcCCccceeccc
Q 019486 155 HVFVDEFSCIGCKNCNNVAPEV-----FKIEEDFGRARVYNQ---CGINEFVQQAIESCPVDCIHRTS 214 (340)
Q Consensus 155 ~vfvDe~~CiGCg~C~~v~P~~-----F~iedd~G~a~vv~q---~g~~E~v~eAv~~CPv~cI~~~~ 214 (340)
.+.+|...||+|+.|..+|+.. +.+..+ |....+.. ...|..+..|++.||++||...+
T Consensus 173 ~i~~d~~~CI~C~~Cv~~C~~~~~~~~i~~~~~-g~~~~i~~~~~~~~C~~CG~Cv~vCP~gAl~~~~ 239 (783)
T 3i9v_3 173 FVILDRERCIHCKRCVRYFEEVPGDEVLDFIER-GVHTFIGTMDFGLPSGFSGNITDICPVGALLDLT 239 (783)
T ss_dssp TEEECTTTCCCCCHHHHHHHHTTCCCCCEECSC-TTSCCEECSSTTCCSTTTTTHHHHCSSSSEEEGG
T ss_pred cEEEchhhCCCccHHHHHhhhhcCCceeeeecC-CCccEEccCCCCCCCccchhHHhhcccCceeccc
Confidence 4567999999999999999542 223322 22222211 11345566699999999998654
No 63
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=94.14 E-value=0.013 Score=56.53 Aligned_cols=60 Identities=17% Similarity=0.246 Sum_probs=39.9
Q ss_pred ccccccccccCCCCcccCCCCccc-ccccCCceEEccCCCCHH-HHH-----HHHHcCCccceecccccc
Q 019486 155 HVFVDEFSCIGCKNCNNVAPEVFK-IEEDFGRARVYNQCGINE-FVQ-----QAIESCPVDCIHRTSAQQ 217 (340)
Q Consensus 155 ~vfvDe~~CiGCg~C~~v~P~~F~-iedd~G~a~vv~q~g~~E-~v~-----eAv~~CPv~cI~~~~~~~ 217 (340)
.+.+|...|++|+.|..+||.... ++...+ ....+..+. .+. .|+..||++||.+.+..+
T Consensus 176 ~v~id~~kCigCg~Cv~aCP~~Ai~~~~~~~---~~~kC~~C~~r~~~g~~paCv~~CP~~Ai~~g~~~d 242 (352)
T 2ivf_B 176 IVLVDQERCKGHRHCVEACPYKAIYFNPVSQ---TSEKCILCYPRIEKGIANACNRQCPGRVRAFGYLDD 242 (352)
T ss_dssp CEEECTTTCCCCCHHHHHCTTCCEEEETTTT---EEEECCTTHHHHTTTBCCHHHHTCTTCCEEEEETTC
T ss_pred eEEechhhcCCchHHHhhcCccceecccccc---cccccCCCcchhhcCCCChHHHhcCccceeccccch
Confidence 356788899999999999997643 333222 222344442 222 599999999999876543
No 64
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=93.90 E-value=0.017 Score=64.31 Aligned_cols=58 Identities=22% Similarity=0.414 Sum_probs=38.8
Q ss_pred ccccccccCCCCcccCCCCcccc----ccc--------C-----------Cc--eEEcc--CCCCHHHHHHHHHcCCc--
Q 019486 157 FVDEFSCIGCKNCNNVAPEVFKI----EED--------F-----------GR--ARVYN--QCGINEFVQQAIESCPV-- 207 (340)
Q Consensus 157 fvDe~~CiGCg~C~~v~P~~F~i----edd--------~-----------G~--a~vv~--q~g~~E~v~eAv~~CPv-- 207 (340)
.+|...||+|+.|..+||...+. +++ | |. ...+. .|..|. .|+..||+
T Consensus 682 ~~d~~kCi~Cg~Cv~vCP~~AI~~~~~~~~e~~~ap~g~~~~~~~~k~~~g~~~~~~v~~~~C~gCG---~Cv~vCP~~~ 758 (1231)
T 2c42_A 682 QWVPENCIQCNQCAFVCPHSAILPVLAKEEELVGAPANFTALEAKGKELKGYKFRIQINTLDCMGCG---NCADICPPKE 758 (1231)
T ss_dssp EECTTTCCCCCHHHHHCSSCCEEEEEECGGGGTTCCTTCCCEECCSGGGTTCEEEEEECTTTCCCCC---HHHHHCSSSS
T ss_pred EEeCccCCchhhHHHhCCcccccccccchHHHhhCcccccccccccccccccccceeechhhCCChh---HHHhhCCCCc
Confidence 45889999999999999987431 110 0 11 11222 144444 49999999
Q ss_pred cceecccccc
Q 019486 208 DCIHRTSAQQ 217 (340)
Q Consensus 208 ~cI~~~~~~~ 217 (340)
+||.+.....
T Consensus 759 ~AI~~~~~~~ 768 (1231)
T 2c42_A 759 KALVMQPLDT 768 (1231)
T ss_dssp CSEEEEEGGG
T ss_pred cCeEEecchh
Confidence 9999987654
No 65
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=93.79 E-value=0.012 Score=52.71 Aligned_cols=59 Identities=10% Similarity=0.152 Sum_probs=34.4
Q ss_pred cccccccccc--CCCCcccCCCCccc-ccccCCceEEccCCCCHH-HHH-----HHHHcCCccceeccccc
Q 019486 155 HVFVDEFSCI--GCKNCNNVAPEVFK-IEEDFGRARVYNQCGINE-FVQ-----QAIESCPVDCIHRTSAQ 216 (340)
Q Consensus 155 ~vfvDe~~Ci--GCg~C~~v~P~~F~-iedd~G~a~vv~q~g~~E-~v~-----eAv~~CPv~cI~~~~~~ 216 (340)
.+.+|...|+ +|+.|..+||.... ++++.+ ....+..+. .+. .++..||++||.+.+..
T Consensus 100 ~v~id~~~C~~~~C~~C~~~CP~~Ai~~~~~~~---~~~kC~~C~~~~~~G~~p~Cv~~CP~~Ai~~~~~~ 167 (214)
T 1h0h_B 100 CVLFTPKTKDLEDYESVISACPYDVPRKVAESN---QMAKCDMCIDRITNGLRPACVTSCPTGAMNFGDLS 167 (214)
T ss_dssp CEEECGGGGGCSCHHHHHHHCTTCCCEECTTSS---CEECCCTTHHHHTTTCCCHHHHHCSSSCEEEEEHH
T ss_pred eEEEeHHHCccccccHHHHhcCCCCeEecCCCc---ccCcCCCCcchhhcCCChhHHHhcCcccEEEccHH
Confidence 3556777888 88888888886543 333222 122233332 111 47888888888876543
No 66
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=93.02 E-value=0.064 Score=47.17 Aligned_cols=58 Identities=24% Similarity=0.336 Sum_probs=40.2
Q ss_pred ccccccccccCCC--CcccCCCCcccccccCCceEEccC-CCCHHHHHHHHHcCCccceecccc
Q 019486 155 HVFVDEFSCIGCK--NCNNVAPEVFKIEEDFGRARVYNQ-CGINEFVQQAIESCPVDCIHRTSA 215 (340)
Q Consensus 155 ~vfvDe~~CiGCg--~C~~v~P~~F~iedd~G~a~vv~q-~g~~E~v~eAv~~CPv~cI~~~~~ 215 (340)
.+..+...|++|+ .|..+||.......+.|...+... +..+.. ++..||.+||.+...
T Consensus 50 ~~~~~~~~C~~C~~p~C~~~CP~gAi~~~~~g~~~id~~~CigC~~---C~~~CP~~Ai~~~~~ 110 (195)
T 2vpz_B 50 VVEFRPEQCLHCENPPCVPVCPTGASYQTKDGLVLVDPKKCIACGA---CIAACPYDARYLHPA 110 (195)
T ss_dssp EEEEEEEECCCCSSCTTTTTCSSSCEEECTTSCEEECTTTCCCCCH---HHHHCTTCCCEECTT
T ss_pred eEEECcccCcCccCcHHHHhcCCCceecccccceeecCCCCCCcCh---hHhhCCCCCeEECCC
Confidence 4556788999999 699999987654333354333222 444444 899999999998754
No 67
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=92.22 E-value=0.06 Score=54.42 Aligned_cols=56 Identities=18% Similarity=0.224 Sum_probs=36.4
Q ss_pred ccccccccccCCCCcccCCCCccc-ccccCCceEEccCCCCHH-HHH-----HHHHcCCccceecc
Q 019486 155 HVFVDEFSCIGCKNCNNVAPEVFK-IEEDFGRARVYNQCGINE-FVQ-----QAIESCPVDCIHRT 213 (340)
Q Consensus 155 ~vfvDe~~CiGCg~C~~v~P~~F~-iedd~G~a~vv~q~g~~E-~v~-----eAv~~CPv~cI~~~ 213 (340)
.+.+|...|++|+.|..+||.... ++.+.+. ...|..|. .+. .|+..||++||.+.
T Consensus 209 ~v~id~~kCigCg~Cv~~CP~~AI~~~~~~~~---~~kC~~Cg~ri~~G~~P~Cv~~CP~~Ai~~g 271 (512)
T 1q16_B 209 IVLIDQDKCRGWRMCITGCPYKKIYFNWKSGK---SEKCIFCYPRIEAGQPTVCSETCVGRIRYLG 271 (512)
T ss_dssp CEEECTTTCCCCCCHHHHCTTCCEEEETTTTE---EEECCTTHHHHTTTCCCHHHHTCTTCCEEEE
T ss_pred eEEECHHHCCCchHHHhhCCccceecccCCCC---cccCcCCCchhhcCCCCceEeeCchhhhhcc
Confidence 356788889999999999987643 3333221 22244443 111 58999999998865
No 68
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=92.13 E-value=0.04 Score=53.13 Aligned_cols=58 Identities=24% Similarity=0.404 Sum_probs=40.4
Q ss_pred ccccccccccCCC--CcccCCCCcccc-cccCCceEEccC-CCCHHHHHHHHHcCCccceecccc
Q 019486 155 HVFVDEFSCIGCK--NCNNVAPEVFKI-EEDFGRARVYNQ-CGINEFVQQAIESCPVDCIHRTSA 215 (340)
Q Consensus 155 ~vfvDe~~CiGCg--~C~~v~P~~F~i-edd~G~a~vv~q-~g~~E~v~eAv~~CPv~cI~~~~~ 215 (340)
.++.+...|++|+ .|..+||..... +...|...+-.. +..+. .|+..||.+||.+...
T Consensus 143 ~~~~~~~~C~~C~~~~Cv~~CP~gAi~~~~~~g~v~id~~kCigCg---~Cv~aCP~~Ai~~~~~ 204 (352)
T 2ivf_B 143 FFFYLARMCNHCTNPACLAACPTGAIYKREDNGIVLVDQERCKGHR---HCVEACPYKAIYFNPV 204 (352)
T ss_dssp ECEEEEECCCCCSSCHHHHHCTTCCEEECTTTCCEEECTTTCCCCC---HHHHHCTTCCEEEETT
T ss_pred EEEECCCCCcCcCCccccccCCCCceeecCCCCeEEechhhcCCch---HHHhhcCccceecccc
Confidence 4567788999999 899999987654 332354333222 44443 4999999999998653
No 69
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=90.50 E-value=0.067 Score=54.06 Aligned_cols=58 Identities=19% Similarity=0.247 Sum_probs=39.7
Q ss_pred ccccccccccCCC--CcccCCCCccc-ccccCCceEEccC-CCCHHHHHHHHHcCCccceecccc
Q 019486 155 HVFVDEFSCIGCK--NCNNVAPEVFK-IEEDFGRARVYNQ-CGINEFVQQAIESCPVDCIHRTSA 215 (340)
Q Consensus 155 ~vfvDe~~CiGCg--~C~~v~P~~F~-iedd~G~a~vv~q-~g~~E~v~eAv~~CPv~cI~~~~~ 215 (340)
.++++...|++|+ .|..+||...+ +..+.|...+-.. |..|.. |+..||.+||.+...
T Consensus 176 ~i~~~~~~C~~C~~~~Cv~aCP~gAI~~~~~~g~v~id~~kCigCg~---Cv~~CP~~AI~~~~~ 237 (512)
T 1q16_B 176 FMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCRGWRM---CITGCPYKKIYFNWK 237 (512)
T ss_dssp CCEEEEECCCCCSSCHHHHTCTTCCEEEETTTCCEEECTTTCCCCCC---HHHHCTTCCEEEETT
T ss_pred eEEecCccCcCCCCchhhhhCCcCcEEeecCCCeEEECHHHCCCchH---HHhhCCccceecccC
Confidence 3556888999999 59999997654 3323254443322 444444 899999999998643
No 70
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=89.31 E-value=0.14 Score=52.23 Aligned_cols=55 Identities=16% Similarity=0.117 Sum_probs=38.3
Q ss_pred cccccc------cCCCCcccCCCCc-ccc-cccCC---ceEEccC-CCCHHHHHHHHHcCCccceecccc
Q 019486 158 VDEFSC------IGCKNCNNVAPEV-FKI-EEDFG---RARVYNQ-CGINEFVQQAIESCPVDCIHRTSA 215 (340)
Q Consensus 158 vDe~~C------iGCg~C~~v~P~~-F~i-edd~G---~a~vv~q-~g~~E~v~eAv~~CPv~cI~~~~~ 215 (340)
.|...| ..|+.|..+||.. +++ +++.| ...+-.+ |-.|.. |...||.++|.|+.+
T Consensus 507 ~d~~~~~~~~~~~~~~~c~~~CPa~~~~~~~~~~~~~~~~~i~~~~Ci~C~~---C~~~cp~~~i~~~~p 573 (584)
T 2gmh_A 507 KDDSVPVNRNLSIYDGPEQRFCPAGVYEFVPLEQGDGFRLQINAQNCVHCKT---CDIKDPSQNINWVVP 573 (584)
T ss_dssp SSTTHHHHTHHHHHCCTHHHHCTTCCEEEEECSSTTCEEEEECGGGCCCCCH---HHHHCTTCCEEECCC
T ss_pred cCcccchhhchhhhcchhhhcCChhhEEEeecCCCCceEEEEeCCCCcCCCC---chhhCCCCCceeECC
Confidence 366778 8999999999965 555 53325 3233233 555545 889999999999865
No 71
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=87.89 E-value=0.12 Score=48.32 Aligned_cols=56 Identities=18% Similarity=0.411 Sum_probs=38.0
Q ss_pred ccccccccCCC--CcccCCCC-cccccccCCceEEccC-CCCHHHHHHHHHcCCccceecccc
Q 019486 157 FVDEFSCIGCK--NCNNVAPE-VFKIEEDFGRARVYNQ-CGINEFVQQAIESCPVDCIHRTSA 215 (340)
Q Consensus 157 fvDe~~CiGCg--~C~~v~P~-~F~iedd~G~a~vv~q-~g~~E~v~eAv~~CPv~cI~~~~~ 215 (340)
.++...|++|+ .|..+||. ........|...+... +-.+.. |+..||.++|.+...
T Consensus 94 ~~~~~~C~~C~~~~C~~~CP~~gAi~~~~~g~v~id~~~CigCg~---C~~~CP~~ai~~~~~ 153 (294)
T 1kqf_B 94 LIRKDGCMHCEDPGCLKACPSAGAIIQYANGIVDFQSENCIGCGY---CIAGCPFNIPRLNKE 153 (294)
T ss_dssp EEEEESCCCBSSCHHHHHCCSTTSEEEETTSCEEECGGGCCCCCH---HHHHCTTCCCEEETT
T ss_pred EECcccCCCcCChhhhhhCCccCccccccccceEeCcccCCCcch---hhhcCCCCCcEecCC
Confidence 45677899999 79999997 5443323354443322 554544 899999999998653
No 72
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=87.87 E-value=0.18 Score=44.86 Aligned_cols=55 Identities=22% Similarity=0.329 Sum_probs=37.3
Q ss_pred cccccccCCCC--cccCCC---Cccccccc-CCceEEccC-CC--CHHHHHHHHHcCCccceecccc
Q 019486 158 VDEFSCIGCKN--CNNVAP---EVFKIEED-FGRARVYNQ-CG--INEFVQQAIESCPVDCIHRTSA 215 (340)
Q Consensus 158 vDe~~CiGCg~--C~~v~P---~~F~iedd-~G~a~vv~q-~g--~~E~v~eAv~~CPv~cI~~~~~ 215 (340)
.....|.+|+. |..+|| ........ .|...+..+ +. .+ ..++..||.+||.+.+.
T Consensus 67 ~~~~~C~~C~~p~C~~~CP~~~~gAi~~~~~~g~v~id~~~C~~~~C---~~C~~~CP~~Ai~~~~~ 130 (214)
T 1h0h_B 67 FFPDQCRHCIAPPCKATADMEDESAIIHDDATGCVLFTPKTKDLEDY---ESVISACPYDVPRKVAE 130 (214)
T ss_dssp EEEECCCCCSSCHHHHHHTTTCTTSEEECTTTCCEEECGGGGGCSCH---HHHHHHCTTCCCEECTT
T ss_pred ecCCcCcCcCCchhhccCCccccccEEecCCCCeEEEeHHHCccccc---cHHHHhcCCCCeEecCC
Confidence 45678999997 999999 66543322 354433322 43 44 44999999999998653
No 73
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=86.85 E-value=0.2 Score=46.50 Aligned_cols=55 Identities=13% Similarity=0.318 Sum_probs=37.2
Q ss_pred cccccccccCCCC--cccCCCCcccccccCCceEEccC-CCCHHHHHHHHHcCCccceeccc
Q 019486 156 VFVDEFSCIGCKN--CNNVAPEVFKIEEDFGRARVYNQ-CGINEFVQQAIESCPVDCIHRTS 214 (340)
Q Consensus 156 vfvDe~~CiGCg~--C~~v~P~~F~iedd~G~a~vv~q-~g~~E~v~eAv~~CPv~cI~~~~ 214 (340)
.......|.+|+. |..+||. .....+.|...+... +..+. .|+..||.+||.+..
T Consensus 61 ~~~~~~~C~~C~~p~C~~~CP~-Ai~~~~~g~v~id~~~CigC~---~C~~~CP~~Ai~~~~ 118 (274)
T 1ti6_B 61 INYRPTPCMHCENAPCVAKGNG-AVYQREDGIVLIDPEKAKGKK---ELLDTCPYGVMYWNE 118 (274)
T ss_dssp EEEEEECCCCCTTCHHHHHTTT-SEEECTTSCEEECTTTTTTCG---GGGGGCSSCCCEEET
T ss_pred eeEcCCcCCCCCChHHHhhChH-HhhhccCCcEEechhhccchH---HHHhhCccCCeEEEc
Confidence 3445678999999 9999999 543323254333222 44443 489999999999864
No 74
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=81.97 E-value=0.77 Score=47.16 Aligned_cols=46 Identities=7% Similarity=0.071 Sum_probs=36.3
Q ss_pred CCCchhhcCCCCCCCH--HHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHH
Q 019486 69 ADDYYAVLGLLPDATP--EQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAV 122 (340)
Q Consensus 69 ~~d~Y~vLgv~~~as~--~eIk~AYr~la~~~HPD~~~~~~~~~~~f~~i~~Ay~v 122 (340)
..|||.+||++.+... .+|+++||++++..+++ .+++..|..|+.|
T Consensus 628 ~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 628 KASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMANKV 675 (681)
T ss_dssp CCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHHHH
T ss_pred CCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhccc
Confidence 3459999999766655 67999999999976654 4678888888876
No 75
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=79.30 E-value=0.32 Score=46.92 Aligned_cols=55 Identities=11% Similarity=0.079 Sum_probs=33.5
Q ss_pred cccccccc-cCC--CCcccCCCCccc-ccccCCceEEccC-CCCHHHHHHHHHcCCccceecc
Q 019486 156 VFVDEFSC-IGC--KNCNNVAPEVFK-IEEDFGRARVYNQ-CGINEFVQQAIESCPVDCIHRT 213 (340)
Q Consensus 156 vfvDe~~C-iGC--g~C~~v~P~~F~-iedd~G~a~vv~q-~g~~E~v~eAv~~CPv~cI~~~ 213 (340)
..+|...| .+| +.|..+||...+ ++.+.+...+-.. |..|.. |+..||.+||...
T Consensus 200 p~id~~~c~~~Ce~~~Cv~~CP~~AI~~~~~~~~~~id~~~C~~Cg~---C~~~CP~~Ai~~~ 259 (366)
T 3mm5_B 200 PIPNDEAIRKTCEIPSTVAACPTGALKPDMKNKTIKVDVEKCMYCGN---CYTMCPGMPLFDP 259 (366)
T ss_dssp CCCCHHHHHHHCCHHHHHHTCTTCCEEEETTTTEEEECGGGCCCCCH---HHHHCTTCCCCCT
T ss_pred eEEcchhccccccccchhccCCccceEecCCCCeEEEehhhCCCcch---HHHhCCHhhcccc
Confidence 34555555 466 889999998764 3322233333222 554444 8899999998654
No 76
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=69.66 E-value=0.48 Score=42.40 Aligned_cols=21 Identities=24% Similarity=0.646 Sum_probs=17.3
Q ss_pred cccccccccCCCCcccCCCCc
Q 019486 156 VFVDEFSCIGCKNCNNVAPEV 176 (340)
Q Consensus 156 vfvDe~~CiGCg~C~~v~P~~ 176 (340)
+..+...||+||.|..+||..
T Consensus 142 ~~~~~~~Ci~Cg~C~~~CP~~ 162 (238)
T 2wdq_B 142 KLDGLYECILCACCSTSCPSF 162 (238)
T ss_dssp TTTTTTTCCCCCTTGGGCHHH
T ss_pred HHhccccccccCCchhhCcCC
Confidence 345678899999999999864
No 77
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=67.79 E-value=1.9 Score=33.26 Aligned_cols=23 Identities=22% Similarity=0.524 Sum_probs=19.3
Q ss_pred cccccccccCCCCcccCCCCccc
Q 019486 156 VFVDEFSCIGCKNCNNVAPEVFK 178 (340)
Q Consensus 156 vfvDe~~CiGCg~C~~v~P~~F~ 178 (340)
+.++...|++|+.|..+||....
T Consensus 32 ~~i~~~~C~~Cg~C~~~CP~~ai 54 (106)
T 7fd1_A 32 LVIHPDECIDCALCEPECPAQAI 54 (106)
T ss_dssp EEECTTTCCCCCTTGGGCTTCCE
T ss_pred EEECcccCCChhhhHHhCCChhh
Confidence 45678889999999999997753
No 78
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Probab=65.89 E-value=1.3 Score=43.46 Aligned_cols=19 Identities=16% Similarity=0.244 Sum_probs=11.9
Q ss_pred hhhcCCCCCCCHHHHHHHHHHHH
Q 019486 73 YAVLGLLPDATPEQIKKAYYNCM 95 (340)
Q Consensus 73 Y~vLgv~~~as~~eIk~AYr~la 95 (340)
..++|+ +.+++...+..|.
T Consensus 137 I~l~gv----~~e~l~~i~~eL~ 155 (418)
T 3mm5_A 137 IIFLGT----RSEYLQPCFEDLG 155 (418)
T ss_dssp EEEEEE----CHHHHHHHHHHHH
T ss_pred eEeCCC----CHHHHHHHHHHHh
Confidence 444454 5667777777766
No 79
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=64.93 E-value=1.2 Score=45.72 Aligned_cols=24 Identities=33% Similarity=0.675 Sum_probs=20.7
Q ss_pred CccccccccccCCCCcccCCCCcc
Q 019486 154 DHVFVDEFSCIGCKNCNNVAPEVF 177 (340)
Q Consensus 154 ~~vfvDe~~CiGCg~C~~v~P~~F 177 (340)
...++.|..|||||.|+.-||-..
T Consensus 46 ~~~~i~~~~c~~~~~~~~~cp~~~ 69 (608)
T 3j16_B 46 KIAFISEILCIGCGICVKKCPFDA 69 (608)
T ss_dssp TEEEECTTTCCCCCHHHHHCSSCC
T ss_pred CceEEehhhccccccccccCCccc
Confidence 356789999999999999999764
No 80
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=62.09 E-value=2.9 Score=32.03 Aligned_cols=23 Identities=22% Similarity=0.655 Sum_probs=19.6
Q ss_pred cccccccccCCCCcccCCCCccc
Q 019486 156 VFVDEFSCIGCKNCNNVAPEVFK 178 (340)
Q Consensus 156 vfvDe~~CiGCg~C~~v~P~~F~ 178 (340)
+.++...|++|+.|..+||....
T Consensus 32 ~~~~~~~C~~Cg~C~~~CP~~Ai 54 (105)
T 2v2k_A 32 LYIHPDECVDCGACEPVCPVEAI 54 (105)
T ss_dssp EEECTTTCCCCCCSGGGCTTCCE
T ss_pred EEEeCCcCcchhhHHHhCCccCE
Confidence 45688899999999999998754
No 81
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B*
Probab=60.36 E-value=2.3 Score=41.12 Aligned_cols=55 Identities=13% Similarity=0.117 Sum_probs=30.3
Q ss_pred ccccccccc---CCCCcccCCCCccccccc---CCc---eEEccC--CCCHHHHHHHHHcCCccceecc
Q 019486 156 VFVDEFSCI---GCKNCNNVAPEVFKIEED---FGR---ARVYNQ--CGINEFVQQAIESCPVDCIHRT 213 (340)
Q Consensus 156 vfvDe~~Ci---GCg~C~~v~P~~F~iedd---~G~---a~vv~q--~g~~E~v~eAv~~CPv~cI~~~ 213 (340)
..+|...|. .|+.|..+||...+.-.. .|. ...+.. |-.| ..|+..||.+||...
T Consensus 211 p~id~e~~~~~Ce~~~cv~~CPt~AI~~~~~~~~g~~~~~v~id~~~Ci~C---g~C~~~CP~~Ai~~~ 276 (386)
T 3or1_B 211 PMIDHENLAELCEIPLAVAACPTAAVKPITAEVNGQKVKSVAINNDRCMYC---GNCYTMCPALPLSDG 276 (386)
T ss_dssp CCCCTTTHHHHCCHHHHHHHCTTCCEEEEEEEETTEEEEEEEECTTTCCCC---CHHHHHCTTCCCCCT
T ss_pred ceechhhhcccccchhhhhhCchhhccccccccCCccccccccCCCcCCcc---ccHHHhCcHhhCcCC
Confidence 445555553 347888888887653210 142 222322 3333 337888888887654
No 82
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=59.63 E-value=1.8 Score=31.15 Aligned_cols=23 Identities=30% Similarity=0.693 Sum_probs=19.5
Q ss_pred cccccccccCCCCcccCCCCccc
Q 019486 156 VFVDEFSCIGCKNCNNVAPEVFK 178 (340)
Q Consensus 156 vfvDe~~CiGCg~C~~v~P~~F~ 178 (340)
+.++...|++||.|..+||....
T Consensus 32 ~~~~~~~C~~Cg~C~~~CP~~ai 54 (77)
T 1bc6_A 32 YYIDPDVCIDCGACEAVCPVSAI 54 (77)
T ss_dssp EEECTTTCCSCCSHHHHSGGGSS
T ss_pred EEECcccCcCccCCHhhcCccce
Confidence 45688899999999999998754
No 83
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=58.71 E-value=2.7 Score=40.35 Aligned_cols=25 Identities=28% Similarity=0.558 Sum_probs=21.5
Q ss_pred CccccccccccCCCCcccCCCCccc
Q 019486 154 DHVFVDEFSCIGCKNCNNVAPEVFK 178 (340)
Q Consensus 154 ~~vfvDe~~CiGCg~C~~v~P~~F~ 178 (340)
..+.+|...|++|+.|+.+||....
T Consensus 232 ~~~~id~~~C~~Cg~C~~~CP~~Ai 256 (366)
T 3mm5_B 232 KTIKVDVEKCMYCGNCYTMCPGMPL 256 (366)
T ss_dssp TEEEECGGGCCCCCHHHHHCTTCCC
T ss_pred CeEEEehhhCCCcchHHHhCCHhhc
Confidence 4567899999999999999998654
No 84
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=58.49 E-value=0.76 Score=48.87 Aligned_cols=53 Identities=19% Similarity=0.300 Sum_probs=33.0
Q ss_pred ccccccccCCCCcccCCCCccccccc-----CCc---e-EEccCCCCHHHHHHHHHcCCccceec
Q 019486 157 FVDEFSCIGCKNCNNVAPEVFKIEED-----FGR---A-RVYNQCGINEFVQQAIESCPVDCIHR 212 (340)
Q Consensus 157 fvDe~~CiGCg~C~~v~P~~F~iedd-----~G~---a-~vv~q~g~~E~v~eAv~~CPv~cI~~ 212 (340)
..+...|++||.|..+||....+.+- .|. . .....|.. +..|+..||++++..
T Consensus 411 ~~~~~~Ci~CG~C~~~CP~~~~~~~il~~~~~G~~~~~~~~~~~Ci~---Cg~C~~vCP~ga~~~ 472 (807)
T 3cf4_A 411 VNMVAKCADCGACLLACPEEIDIPEAMGFAKKGDFSYFEEIHDTCIG---CRRCEQVCKKEIPIL 472 (807)
T ss_dssp HHHHHHCCCCCHHHHHCTTCCCHHHHHHHHHTTCTHHHHHHHHHCCC---CCHHHHHCTTCCCHH
T ss_pred HHhHHhCCCCCchhhhCCCCCchHHHHHHHHcCChhhhhhchhhccc---hhhHHHhCCCCCChH
Confidence 34678899999999999987644210 021 0 00111333 344899999998764
No 85
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B*
Probab=56.99 E-value=1.1 Score=43.59 Aligned_cols=21 Identities=29% Similarity=0.776 Sum_probs=10.4
Q ss_pred cccccccccCCCCcccCCCCc
Q 019486 156 VFVDEFSCIGCKNCNNVAPEV 176 (340)
Q Consensus 156 vfvDe~~CiGCg~C~~v~P~~ 176 (340)
+.+|...|++||.|+.+||..
T Consensus 251 v~id~~~Ci~Cg~C~~~CP~~ 271 (386)
T 3or1_B 251 VAINNDRCMYCGNCYTMCPAL 271 (386)
T ss_dssp EEECTTTCCCCCHHHHHCTTC
T ss_pred cccCCCcCCccccHHHhCcHh
Confidence 334445555555555555543
No 86
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=55.48 E-value=2.6 Score=30.49 Aligned_cols=23 Identities=22% Similarity=0.556 Sum_probs=19.4
Q ss_pred cccccccccCCCCcccCCCCccc
Q 019486 156 VFVDEFSCIGCKNCNNVAPEVFK 178 (340)
Q Consensus 156 vfvDe~~CiGCg~C~~v~P~~F~ 178 (340)
+.++...|++||.|..+||....
T Consensus 32 ~~~~~~~C~~C~~C~~~CP~~Ai 54 (78)
T 1h98_A 32 FYIHPEECIDCGACVPACPVNAI 54 (78)
T ss_dssp EEECTTTCCCCCTHHHHCTTCCE
T ss_pred EEECcccCCcHhHHHHhCCccce
Confidence 45678899999999999998754
No 87
>3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A* 2xsj_A*
Probab=54.46 E-value=2.9 Score=41.34 Aligned_cols=35 Identities=26% Similarity=0.592 Sum_probs=25.4
Q ss_pred ccccccccccCCCCcccCCCCcccccccCCceEEc
Q 019486 155 HVFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVY 189 (340)
Q Consensus 155 ~vfvDe~~CiGCg~C~~v~P~~F~iedd~G~a~vv 189 (340)
.+.+|...|+.|+.|+.+||.......+.|....+
T Consensus 295 ~l~Id~~~C~~Cg~Ci~~CP~al~~~~~~G~~ilv 329 (437)
T 3or1_A 295 TLSIDNKNCTRCMHCINTMPRALKIGDERGASILV 329 (437)
T ss_dssp EEEECGGGCCCCSHHHHHCTTTEECCSSEEEEEEE
T ss_pred EEEEccccCCchhhhHhhCcHhhccCCCCceEEEE
Confidence 45678889999999999999865555554554444
No 88
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=53.52 E-value=2.7 Score=31.91 Aligned_cols=23 Identities=39% Similarity=0.573 Sum_probs=18.9
Q ss_pred cccccccccCCCCcccCCCCccc
Q 019486 156 VFVDEFSCIGCKNCNNVAPEVFK 178 (340)
Q Consensus 156 vfvDe~~CiGCg~C~~v~P~~F~ 178 (340)
+.++...|++|+.|..+||....
T Consensus 76 ~~~~~~~C~~Cg~C~~~CP~~Ai 98 (103)
T 1xer_A 76 DPVNEQACIFCMACVNVCPVAAI 98 (103)
T ss_dssp ECTTGGGCCCCCHHHHHCTTCCE
T ss_pred eecCcccccChhhHHHhccccce
Confidence 34677889999999999998643
No 89
>2pa8_D DNA-directed RNA polymerase subunit D; ferredoxin-like Fe-S binding motif, platform for RNA polymer assembly, transferase; 1.76A {Sulfolobus solfataricus} PDB: 2pmz_D 3hkz_D 2waq_D 2wb1_D 2y0s_D
Probab=53.01 E-value=11 Score=34.38 Aligned_cols=83 Identities=18% Similarity=0.388 Sum_probs=46.4
Q ss_pred cCCCCcccCCCCc-ccccccCCceEEccC--CCCHHHHHHHHHcCCccceecccccchhhhHHHHHHHhhhhhhhhccCC
Q 019486 164 IGCKNCNNVAPEV-FKIEEDFGRARVYNQ--CGINEFVQQAIESCPVDCIHRTSAQQLSLLEDEMRRVERVNVAMMLSGM 240 (340)
Q Consensus 164 iGCg~C~~v~P~~-F~iedd~G~a~vv~q--~g~~E~v~eAv~~CPv~cI~~~~~~~l~~Le~~~~~~~~~~~~~~~~g~ 240 (340)
.+|+.|...||.. +.+++. ...+... +..| ..|+..|| ++|.+....+--.+ .+. ..|
T Consensus 174 ~~C~~C~~~CP~g~I~id~~--~~v~~d~~~C~~C---~~C~~vCp-~aI~~~~~~d~~i~----------~VE--t~G- 234 (265)
T 2pa8_D 174 ANCEKAVNVCPEGVFELKDG--KLSVKNELSCTLC---EECLRYCN-GSIRISFVEDKYIL----------EIE--SVG- 234 (265)
T ss_dssp SCCTTHHHHCTTCCEEEETT--EEEESCGGGCCCC---CHHHHHHT-TSEEEEEEEEEEEE----------EEE--ECS-
T ss_pred hhHHHHHHhCcccCeEecCC--eeEEeccccCCCc---hHHHHhCC-CceEEEecCCeEEE----------Eec--cCC-
Confidence 7899999999966 456553 3333321 4333 34788899 99987643211111 000 122
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHH
Q 019486 241 GSGSADVFRMASSRWERRQAKVLEQ 265 (340)
Q Consensus 241 ~~~~~~~~~~a~~~~~~r~~~~~~~ 265 (340)
.-...+.+..|..-...+...+..+
T Consensus 235 sl~Pee~v~~A~~iL~~~~~~~~~~ 259 (265)
T 2pa8_D 235 SLKPERILLEAGKSIIRKIEELEKK 259 (265)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2233666767776666666655443
No 90
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=50.10 E-value=2.8 Score=35.16 Aligned_cols=22 Identities=23% Similarity=0.495 Sum_probs=18.7
Q ss_pred ccccccccCCCCcccCCCCccc
Q 019486 157 FVDEFSCIGCKNCNNVAPEVFK 178 (340)
Q Consensus 157 fvDe~~CiGCg~C~~v~P~~F~ 178 (340)
.++...|++|+.|..+||...+
T Consensus 92 ~~~~~~C~~C~~C~~~CP~~Ai 113 (182)
T 3i9v_9 92 EINMLRCIFCGLCEEACPTGAI 113 (182)
T ss_dssp EEETTTCCCCCHHHHHCSSSCE
T ss_pred ecCCCcCcChhChhhhCCccce
Confidence 4677889999999999998753
No 91
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=48.52 E-value=3.7 Score=29.36 Aligned_cols=21 Identities=33% Similarity=0.850 Sum_probs=17.6
Q ss_pred cccccccCCCCcccCCCCccc
Q 019486 158 VDEFSCIGCKNCNNVAPEVFK 178 (340)
Q Consensus 158 vDe~~CiGCg~C~~v~P~~F~ 178 (340)
++...|++|+.|..+||....
T Consensus 42 ~~~~~C~~Cg~C~~~CP~~ai 62 (80)
T 1jb0_C 42 PRTEDCVGCKRCETACPTDFL 62 (80)
T ss_dssp TTGGGCCCCCHHHHHCCSSSC
T ss_pred CCCCcCcCcCChhhhCCCCcc
Confidence 466789999999999998743
No 92
>1jnr_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.1.5 PDB: 1jnz_B* 2fja_B* 2fjb_B* 2fjd_B* 2fje_B*
Probab=46.56 E-value=3.9 Score=34.00 Aligned_cols=22 Identities=18% Similarity=0.383 Sum_probs=18.7
Q ss_pred cccccccccCCCCcccCCCCcc
Q 019486 156 VFVDEFSCIGCKNCNNVAPEVF 177 (340)
Q Consensus 156 vfvDe~~CiGCg~C~~v~P~~F 177 (340)
+.++...|++|+.|..+||...
T Consensus 40 ~~id~~~C~~Cg~Cv~~CP~~A 61 (150)
T 1jnr_B 40 YNREPDMCWECYSCVKMCPQGA 61 (150)
T ss_dssp EESCGGGCCCCCHHHHHCTTCC
T ss_pred eeeCcccCcCHhHHHHhCCccc
Confidence 3467889999999999999874
No 93
>3gyx_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=42.66 E-value=5 Score=33.97 Aligned_cols=22 Identities=18% Similarity=0.436 Sum_probs=18.7
Q ss_pred ccccccccCCCCcccCCCCccc
Q 019486 157 FVDEFSCIGCKNCNNVAPEVFK 178 (340)
Q Consensus 157 fvDe~~CiGCg~C~~v~P~~F~ 178 (340)
.++...|++|+.|..+||...+
T Consensus 40 ~~d~~~C~~Cg~Cv~~CP~~Ai 61 (166)
T 3gyx_B 40 NQEPEACWECYSCIKICPQGAI 61 (166)
T ss_dssp ESCGGGCCCCCHHHHHCSSCCE
T ss_pred ecCcccCcccChHhHhCCccce
Confidence 4677899999999999998743
No 94
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=42.33 E-value=9.1 Score=37.26 Aligned_cols=21 Identities=29% Similarity=0.529 Sum_probs=18.5
Q ss_pred ccccccCCCCcccCCCCcccc
Q 019486 159 DEFSCIGCKNCNNVAPEVFKI 179 (340)
Q Consensus 159 De~~CiGCg~C~~v~P~~F~i 179 (340)
+...|++||.|..+||.....
T Consensus 62 ~~~~C~~Cg~C~~~CP~~Ai~ 82 (421)
T 1hfe_L 62 HIEACINCGQCLTHCPENAIY 82 (421)
T ss_dssp CGGGCCCCCTTGGGCTTCCEE
T ss_pred ChhhCCchhhHHHhhCcCCcc
Confidence 788999999999999987654
No 95
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=40.79 E-value=5.1 Score=44.57 Aligned_cols=20 Identities=30% Similarity=1.117 Sum_probs=17.6
Q ss_pred cccccccccCCCCcccCCCC
Q 019486 156 VFVDEFSCIGCKNCNNVAPE 175 (340)
Q Consensus 156 vfvDe~~CiGCg~C~~v~P~ 175 (340)
+.++...|++||.|..+||.
T Consensus 737 ~~v~~~~C~gCG~Cv~vCP~ 756 (1231)
T 2c42_A 737 IQINTLDCMGCGNCADICPP 756 (1231)
T ss_dssp EEECTTTCCCCCHHHHHCSS
T ss_pred eeechhhCCChhHHHhhCCC
Confidence 34677899999999999998
No 96
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=37.65 E-value=5.8 Score=40.61 Aligned_cols=23 Identities=30% Similarity=0.586 Sum_probs=18.6
Q ss_pred CccccccccccCCCCcccCCCCc
Q 019486 154 DHVFVDEFSCIGCKNCNNVAPEV 176 (340)
Q Consensus 154 ~~vfvDe~~CiGCg~C~~v~P~~ 176 (340)
...++.|..|+|||.|...||..
T Consensus 60 ~~~~i~e~~c~gc~~~~~~~p~~ 82 (607)
T 3bk7_A 60 YKPIIQEASCTGCGICVHKCPFN 82 (607)
T ss_dssp TEEEECTTTCCCCCHHHHHCSSC
T ss_pred CcceeeecccCccccccCCCCcc
Confidence 34578899999999998888743
No 97
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=36.85 E-value=9.9 Score=34.11 Aligned_cols=19 Identities=26% Similarity=0.688 Sum_probs=16.1
Q ss_pred cccccccCCCCcccCCCCc
Q 019486 158 VDEFSCIGCKNCNNVAPEV 176 (340)
Q Consensus 158 vDe~~CiGCg~C~~v~P~~ 176 (340)
.+...||+||.|..+||..
T Consensus 153 ~~~~~Ci~CG~C~~~CP~~ 171 (252)
T 2h88_B 153 DGLYECILCACCSTSCPSY 171 (252)
T ss_dssp TTTTTCCCCCTTGGGCHHH
T ss_pred HhHHhchhhCcchhhCCCC
Confidence 4566899999999999964
No 98
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=35.80 E-value=6.5 Score=40.31 Aligned_cols=58 Identities=21% Similarity=0.407 Sum_probs=36.6
Q ss_pred ccccccccccC--CC-CcccCCCCc-----c-cccccCCceEEccC-CCCHHHHHHHHHcCCccceecccc
Q 019486 155 HVFVDEFSCIG--CK-NCNNVAPEV-----F-KIEEDFGRARVYNQ-CGINEFVQQAIESCPVDCIHRTSA 215 (340)
Q Consensus 155 ~vfvDe~~CiG--Cg-~C~~v~P~~-----F-~iedd~G~a~vv~q-~g~~E~v~eAv~~CPv~cI~~~~~ 215 (340)
..++|.+.|.- |+ .|...||.+ . .++++.+.+.+-.. |-+|.- ||.-||-+||.++.-
T Consensus 8 ~~~~~~~~c~~~~~~~~c~~~cp~~~~~~~~~~~~~~~~~~~i~~~~c~~~~~---~~~~cp~~~i~i~nl 75 (608)
T 3j16_B 8 IAIVSADKCKPKKCRQECKRSCPVVKTGKLCIEVTPTSKIAFISEILCIGCGI---CVKKCPFDAIQIINL 75 (608)
T ss_dssp EEEECSSSCCHHHHCSHHHHHCHHHHHTCCSEEEETTTTEEEECTTTCCCCCH---HHHHCSSCCEEEEEE
T ss_pred EEEEeccccCccccccchhhcCCCccCCceEEEEcCCCCceEEehhhcccccc---ccccCCccceEEecC
Confidence 45678888853 54 488888765 1 23344243333333 555555 999999999998653
No 99
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=33.63 E-value=15 Score=34.00 Aligned_cols=17 Identities=29% Similarity=0.933 Sum_probs=14.7
Q ss_pred ccccCCCCcccCCCCcc
Q 019486 161 FSCIGCKNCNNVAPEVF 177 (340)
Q Consensus 161 ~~CiGCg~C~~v~P~~F 177 (340)
..||.||.|..+||..-
T Consensus 180 ~~CI~CG~C~~aCP~~~ 196 (282)
T 3vr8_B 180 YECILCACCSASCPSYW 196 (282)
T ss_pred hhCcccCcCcccCCcee
Confidence 45999999999999764
No 100
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=29.45 E-value=11 Score=38.11 Aligned_cols=23 Identities=22% Similarity=0.473 Sum_probs=19.6
Q ss_pred cccccccccCCCCcccCCCCccc
Q 019486 156 VFVDEFSCIGCKNCNNVAPEVFK 178 (340)
Q Consensus 156 vfvDe~~CiGCg~C~~v~P~~F~ 178 (340)
..++...|++||.|..+||....
T Consensus 183 ~~i~~~~Ci~Cg~Cv~~CP~gAi 205 (574)
T 3c8y_A 183 KCFDDTNCLLCGQCIIACPVAAL 205 (574)
T ss_dssp CCGGGSSCCCCCHHHHHCSSTTE
T ss_pred ceechhhCCcchhHHHhhccCCc
Confidence 45688899999999999998754
No 101
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=29.39 E-value=8.5 Score=34.16 Aligned_cols=22 Identities=23% Similarity=0.514 Sum_probs=18.1
Q ss_pred cccccccccCCCCcccCCCCcc
Q 019486 156 VFVDEFSCIGCKNCNNVAPEVF 177 (340)
Q Consensus 156 vfvDe~~CiGCg~C~~v~P~~F 177 (340)
.+.+...||+||.|..+||...
T Consensus 141 ~~~~~~~Ci~Cg~C~~~CP~~~ 162 (243)
T 1kf6_B 141 KYHQFSGCINCGLCYAACPQFG 162 (243)
T ss_dssp TTGGGGCCCCCCHHHHHCHHHH
T ss_pred HhhhhhhccccCccccccCCCc
Confidence 3467788999999999998753
No 102
>2pa8_D DNA-directed RNA polymerase subunit D; ferredoxin-like Fe-S binding motif, platform for RNA polymer assembly, transferase; 1.76A {Sulfolobus solfataricus} PDB: 2pmz_D 3hkz_D 2waq_D 2wb1_D 2y0s_D
Probab=28.47 E-value=13 Score=33.77 Aligned_cols=25 Identities=24% Similarity=0.507 Sum_probs=19.2
Q ss_pred ccccccccCCCCcccCCCCcccccc
Q 019486 157 FVDEFSCIGCKNCNNVAPEVFKIEE 181 (340)
Q Consensus 157 fvDe~~CiGCg~C~~v~P~~F~ied 181 (340)
+++...|++|+.|..+||.-..+..
T Consensus 197 ~~d~~~C~~C~~C~~vCp~aI~~~~ 221 (265)
T 2pa8_D 197 VKNELSCTLCEECLRYCNGSIRISF 221 (265)
T ss_dssp ESCGGGCCCCCHHHHHHTTSEEEEE
T ss_pred EeccccCCCchHHHHhCCCceEEEe
Confidence 4567899999999999995444443
No 103
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=24.73 E-value=14 Score=37.17 Aligned_cols=24 Identities=21% Similarity=0.581 Sum_probs=20.4
Q ss_pred ccccccccccCCCCcccCCCCccc
Q 019486 155 HVFVDEFSCIGCKNCNNVAPEVFK 178 (340)
Q Consensus 155 ~vfvDe~~CiGCg~C~~v~P~~F~ 178 (340)
.+.++...|+.||.|...||...+
T Consensus 545 ~~~i~~~~Ci~C~~C~~~cp~~~i 568 (584)
T 2gmh_A 545 RLQINAQNCVHCKTCDIKDPSQNI 568 (584)
T ss_dssp EEEECGGGCCCCCHHHHHCTTCCE
T ss_pred EEEEeCCCCcCCCCchhhCCCCCc
Confidence 456788999999999999987755
No 104
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Probab=24.60 E-value=29 Score=33.91 Aligned_cols=24 Identities=0% Similarity=0.036 Sum_probs=12.7
Q ss_pred hhcCCCCC--CCHHHHHHHHHHHHHhc
Q 019486 74 AVLGLLPD--ATPEQIKKAYYNCMKAC 98 (340)
Q Consensus 74 ~vLgv~~~--as~~eIk~AYr~la~~~ 98 (340)
--++++.+ .|.+++++ .-.++.+|
T Consensus 98 vRv~~P~Gr~lt~~qLr~-LadIAeky 123 (418)
T 3mm5_A 98 MRINQPSGWFYSTKALRG-LCDVWEKW 123 (418)
T ss_dssp EEECCCGGGEEEHHHHHH-HHHHHHHH
T ss_pred EEEeCCCCcccCHHHHHH-HHHHHHHh
Confidence 33445544 57777654 33455555
No 105
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=21.37 E-value=12 Score=33.13 Aligned_cols=19 Identities=21% Similarity=0.426 Sum_probs=16.2
Q ss_pred cccccccCCCCcccCCCCc
Q 019486 158 VDEFSCIGCKNCNNVAPEV 176 (340)
Q Consensus 158 vDe~~CiGCg~C~~v~P~~ 176 (340)
.+...|++||.|..+||..
T Consensus 146 ~~~~~Ci~Cg~C~~~CP~~ 164 (241)
T 2bs2_B 146 FELDRCIECGCCIAACGTK 164 (241)
T ss_dssp HHHHTCCCCCHHHHTCHHH
T ss_pred hhhhhhhccCcCcccCCCC
Confidence 3567799999999999976
No 106
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=20.21 E-value=24 Score=37.06 Aligned_cols=23 Identities=9% Similarity=-0.009 Sum_probs=18.8
Q ss_pred ccccCCCCcccCCCCcccccccC
Q 019486 161 FSCIGCKNCNNVAPEVFKIEEDF 183 (340)
Q Consensus 161 ~~CiGCg~C~~v~P~~F~iedd~ 183 (340)
..|++||.|..+||........+
T Consensus 218 ~~C~~CG~Cv~vCP~gAl~~~~~ 240 (783)
T 3i9v_3 218 LPSGFSGNITDICPVGALLDLTA 240 (783)
T ss_dssp CCSTTTTTHHHHCSSSSEEEGGG
T ss_pred CCCccchhHHhhcccCceecccc
Confidence 37999999999999987665443
No 107
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=20.13 E-value=20 Score=31.64 Aligned_cols=21 Identities=24% Similarity=0.464 Sum_probs=16.8
Q ss_pred ccccccCCCCcccCCCCcccc
Q 019486 159 DEFSCIGCKNCNNVAPEVFKI 179 (340)
Q Consensus 159 De~~CiGCg~C~~v~P~~F~i 179 (340)
+...|++||.|..+||..-.+
T Consensus 200 ~~~~C~~Cg~C~~vCP~gi~~ 220 (243)
T 1kf6_B 200 GVWSCTFVGYCSEVCPKHVDP 220 (243)
T ss_dssp TGGGCCCCCHHHHHCTTCCCH
T ss_pred CcccCcccCCcchhCCCCCCH
Confidence 456899999999999986443
Done!