Query 019488
Match_columns 340
No_of_seqs 161 out of 1584
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 16:53:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019488.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019488hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3daa_A D-amino acid aminotrans 100.0 1.1E-63 3.9E-68 467.2 30.2 270 47-325 3-276 (277)
2 3u0g_A Putative branched-chain 100.0 1.8E-63 6.2E-68 475.6 31.9 283 46-336 30-328 (328)
3 2eiy_A ILVE, branched-chain am 100.0 4.7E-62 1.6E-66 462.8 33.9 284 46-336 7-305 (308)
4 1iye_A Branched-chain amino ac 100.0 1.7E-61 5.9E-66 459.1 32.3 283 47-336 9-307 (309)
5 3lul_A 4-amino-4-deoxychorisma 100.0 4.1E-61 1.4E-65 448.8 31.7 263 46-327 5-269 (272)
6 4dqn_A Putative branched-chain 100.0 6.1E-61 2.1E-65 460.9 28.9 280 48-336 34-343 (345)
7 1i2k_A 4-amino-4-deoxychorisma 100.0 3.2E-60 1.1E-64 442.1 30.6 260 47-322 2-266 (269)
8 2xpf_A 4-amino-4-deoxychorisma 100.0 6.9E-60 2.4E-64 444.7 30.0 264 46-326 23-291 (292)
9 3sno_A Hypothetical aminotrans 100.0 2.2E-59 7.5E-64 445.1 25.2 265 42-324 12-313 (315)
10 3uzo_A Branched-chain-amino-ac 100.0 1.9E-58 6.6E-63 445.1 26.8 276 47-331 48-349 (358)
11 3dth_A Branched-chain amino ac 100.0 2E-57 6.9E-62 439.3 29.8 280 47-336 53-371 (372)
12 2a1h_A Branched chain aminotra 100.0 4.1E-57 1.4E-61 437.8 29.8 280 47-337 47-362 (365)
13 2coi_A Branched chain aminotra 100.0 6.8E-57 2.3E-61 438.5 28.1 281 47-336 67-385 (386)
14 3csw_A BCAT, putative branched 100.0 3.3E-56 1.1E-60 418.3 25.5 259 48-330 18-279 (285)
15 3dtg_A Branched-chain amino ac 100.0 8.9E-55 3E-59 422.1 28.7 280 48-336 54-371 (372)
16 2zgi_A Putative 4-amino-4-deox 100.0 5.1E-53 1.7E-57 388.7 17.9 229 47-305 2-233 (246)
17 3qqm_A MLR3007 protein; struct 100.0 1.1E-45 3.8E-50 334.6 23.7 204 69-299 13-220 (221)
18 3ceb_A D-aminoacid aminotransf 100.0 1.4E-42 4.7E-47 308.2 18.6 189 69-294 2-194 (194)
19 2r48_A Phosphotransferase syst 29.9 52 0.0018 25.2 3.9 77 242-323 13-97 (106)
20 2r4q_A Phosphotransferase syst 28.7 54 0.0018 25.1 3.8 82 237-323 8-97 (106)
21 2fz5_A Flavodoxin; alpha/beta 21.1 2E+02 0.0067 21.5 6.0 44 246-291 10-56 (137)
No 1
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A*
Probab=100.00 E-value=1.1e-63 Score=467.19 Aligned_cols=270 Identities=25% Similarity=0.339 Sum_probs=245.5
Q ss_pred ceeCCEEeCCCcceeccCCcccccccceeeeeeeeCCeecCHHhHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHcCC
Q 019488 47 SIFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILNGYLYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLTAASQC 126 (340)
Q Consensus 47 ~~~nG~~~~~~~~~i~~~drg~~yG~gvFEtlrv~~G~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~li~~~~~ 126 (340)
+|+||++++.+++.|+++||||+||||||||||+++|++|+|++|++||.+||+.|+|+.|++.++|.+.+.+++++|+.
T Consensus 3 ~~~nG~~~~~~~~~i~~~d~g~~yGdgvFEtir~~~g~~f~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~li~~n~~ 82 (277)
T 3daa_A 3 TLWNDQIVKDEEVKIDKEDRGYQFGDGVYEVVKVYNGEMFTVNEHIDRLYASAEKIRITIPYTKDKFHQLLHELVEKNEL 82 (277)
T ss_dssp EEETTEEEEGGGCCBCTTBHHHHTCCEEEEEEEEETTEETTHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHHTC
T ss_pred EEECCEEeEhHHCeechhhhHHhcccEEEEEEEEECCEEcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 68999999999999999999999999999999999999999999999999999999999889999999999999999988
Q ss_pred CCceEEEEEecCCCCCccCCC-CCCCceEEEEEEcCCCCc--CCCCcEEEEeeeecCCCCCCCccccCChhHHHHHHHHH
Q 019488 127 KKGTLRFWLTAGPGDFLLSPA-GCPTSAFYAVVIDDDFSQ--CKEGVKVITSSIPMKPRLFATVKNVNYLPNVLAKMEAE 203 (340)
Q Consensus 127 ~~~~lRi~vt~G~g~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~gv~l~~~~~~~~~~~~~~~Kt~nyl~~~la~~eA~ 203 (340)
.+++||+++++|.+.+++.++ .+..|++++++.|.+.+. +.+|+++.+++.. ++.++++||+||+.+++++++|+
T Consensus 83 ~~~~lri~vtrG~~~r~~~~p~~~~~~~~~i~~~p~~~~~~~~~~gv~~~~~~~~--r~~~~~~Kt~nyl~~~la~~eA~ 160 (277)
T 3daa_A 83 NTGHIYFQVTRGTSPRAHQFPENTVKPVIIGYTKENPRPLENLEKGVKATFVEDI--RWLRCDIKSLNLLGAVLAKQEAH 160 (277)
T ss_dssp CSEEEEEEEESCBCSCCSSCCSSCCCCEEEEEEEECCCCHHHHHHCEEEEEEECC--CCSCTTSCBSCCHHHHHHHHHHH
T ss_pred CcEEEEEEEEecCCCcCCCCCCCCCCcEEEEEEEECCCChHHHhCCeEEEEecCc--cccCCCcchhhhHHHHHHHHHHH
Confidence 899999999999776655433 345678888887765321 3579999887543 35578999999999999999999
Q ss_pred HcCCCEEEEEcCCCcEEecCCceEEEEEeCCEEEcCCCC-CccccHHHHHHHHHhhhhhhCCCcceEEEEeeCHHHHhcc
Q 019488 204 DKGASASIWIDEDGYVAEGPNVNVAFITHDKELVLPFFD-KILSGCTAKRLLELAPKLVEQGRLKSVKTANLTVDEAKGA 282 (340)
Q Consensus 204 ~~G~de~Llld~~G~V~E~s~sNi~fv~k~~~l~TP~l~-~iL~GItR~~ll~la~~~~~~G~~~~v~E~~i~~~dL~~a 282 (340)
++|+||+||+| +|+|+|++++|| |+++||+|+|||++ ++|+||||+.|+++|+++ |+ +|+|+.++++||.+|
T Consensus 161 ~~g~~e~l~l~-~g~v~E~~~sNi-f~~~~~~l~TP~~~~~iL~GitR~~vl~~~~~~---g~--~v~e~~i~~~el~~a 233 (277)
T 3daa_A 161 EKGCYEAILHR-NNTVTEGSSSNV-FGIKDGILYTHPANNMILKGITRDVVIACANEI---NM--PVKEIPFTTHEALKM 233 (277)
T ss_dssp HTTCSEEEEEE-TTEEEEETTBEE-EEEETTEEEECCSSTTSCCCHHHHHHHHHHHHT---TC--CEECCCCBHHHHHTC
T ss_pred HCCCCEEEEEc-CCEEEEcCceEE-EEEECCEEECCCCcCCCCccHHHHHHHHHHHHc---CC--eEEEEeCCHHHHHhc
Confidence 99999999997 899999999999 56699999999996 799999999999999998 98 999999999999999
Q ss_pred ceeeeecCccCeEEEEEECCeecCCCCchHHHHHHHHHHHHHh
Q 019488 283 AEMMYVGSTLPLLAITVWDEQPIGDGNVGELTMALSDLLWEDM 325 (340)
Q Consensus 283 dEvfltnS~~gI~pV~~id~~~~~~g~~gp~t~~L~~~~~~~i 325 (340)
||+|+|||++||+||.+||++.++.|++||+|++|++.|.+.|
T Consensus 234 devf~~ns~~~i~pV~~id~~~~~~g~~g~~t~~L~~~~~~~i 276 (277)
T 3daa_A 234 DELFVTSTTSEITPVIEIDGKLIRDGKVGEWTRKLQKQFETKI 276 (277)
T ss_dssp SEEEEEETTTEEEEEEEETTEESTTSSCCHHHHHHHHHHHTTC
T ss_pred CeeeeecChhhEEEEEEECCEECCCCCcCHHHHHHHHHHHHhc
Confidence 9999999999999999999999998889999999999998544
No 2
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei}
Probab=100.00 E-value=1.8e-63 Score=475.61 Aligned_cols=283 Identities=25% Similarity=0.355 Sum_probs=254.8
Q ss_pred cceeCCEEeCCCcceeccCCcccccccceeeeeeeeC---C--eecCHHhHHHHHHHHHHHcCCCCCCCHHHHHHHHHHH
Q 019488 46 SSIFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILN---G--YLYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQL 120 (340)
Q Consensus 46 ~~~~nG~~~~~~~~~i~~~drg~~yG~gvFEtlrv~~---G--~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l 120 (340)
.+|+||++++.+++.|++.||||+||||||||||+++ | ++|+|++|++||.+||+.|+|+.|++.++|.+++.++
T Consensus 30 ~~w~nG~~vp~~~~~i~~~drg~~yGdgvFEtir~~~~~dG~~~~f~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l 109 (328)
T 3u0g_A 30 KIWMDGKLIEWRDAKIHVLTHTLHYGMGVFEGVRAYKTADGGTAIFRLKEHTKRLLNSAKIFQMDVPFDQETLEAAQRDV 109 (328)
T ss_dssp EEEETTEEEEGGGCEEESSCHHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHH
T ss_pred EEEECCEEeehHhCccCccchHHhcCceEEEEEEEEECCCCCeeeCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Confidence 4699999999999999999999999999999999998 9 9999999999999999999999889999999999999
Q ss_pred HHHcCCCCceEEEEEecCCCCCccCCCCCCCceEEEEEEcCCC-Cc---CCCCcEEEEeeeecCCC--CCCCcc-ccCCh
Q 019488 121 TAASQCKKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDF-SQ---CKEGVKVITSSIPMKPR--LFATVK-NVNYL 193 (340)
Q Consensus 121 i~~~~~~~~~lRi~vt~G~g~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~gv~l~~~~~~~~~~--~~~~~K-t~nyl 193 (340)
+++++..+++||+++++|.+.+++.|..+ .+.+++++.|.+. .. +.+|+++.++++.|..+ .++++| ++||+
T Consensus 110 v~~n~~~~~~iR~~vtrg~~~~g~~p~~~-~~~~~i~~~p~~~~~~~~~~~~gv~l~~~~~~R~~~~~~~~~~K~t~nyl 188 (328)
T 3u0g_A 110 VRENKLESCYLRPIIWIGSEKLGVSAKGN-TIHVAIAAWPWGAYLGEEGLAKGIRVKTSSFTRHHVNVSMVRAKASGWYV 188 (328)
T ss_dssp HHHTTCSSEEEEEEEEECSSCCSTTCCCC-CEEEEEEEEECC----HHHHHHCEEEEECSSCCCCTTTSCTTSCBGGGHH
T ss_pred HHhcCCCCeEEEEEEEecCCCCCcCCCCC-CcEEEEEEEEcCCCCChhhhcCCEEEEEeeeeecCCCCcccchhhhhhhH
Confidence 99998889999999999988888766543 4677777766442 21 24799999998766532 378999 89999
Q ss_pred hHHHHHHHHHHcCCCEEEEEcCCCcEEecCCceEEEEEeCCEEEcCCCCCccccHHHHHHHHHhhhhhhCCCcceEEEEe
Q 019488 194 PNVLAKMEAEDKGASASIWIDEDGYVAEGPNVNVAFITHDKELVLPFFDKILSGCTAKRLLELAPKLVEQGRLKSVKTAN 273 (340)
Q Consensus 194 ~~~la~~eA~~~G~de~Llld~~G~V~E~s~sNi~fv~k~~~l~TP~l~~iL~GItR~~ll~la~~~~~~G~~~~v~E~~ 273 (340)
.+++++++|+++|+||+||+|.+|+|+|++++|| |+++||+|+|||++.||+||||+.||++|+++ |+ +|+|+.
T Consensus 189 ~~vla~~eA~~~G~~e~l~ld~~g~v~E~~~sNi-f~v~~g~l~TP~~~~iL~GitR~~vl~~a~~~---g~--~v~e~~ 262 (328)
T 3u0g_A 189 NSILANQEATADGYDEALLLDVDGYVSEGSGENF-FLVNRGKLYTPDLASCLDGITRDTVITLAKEA---GI--EVIEKR 262 (328)
T ss_dssp HHHHHHHHHHHTTCSEEEEECTTSCEEEESSSEE-EEEETTEEEECCSSSSCCCHHHHHHHHHHHHT---TC--CEEECC
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCcEEEcCceeE-EEEECCEEEeCCccccchHHHHHHHHHHHHHc---CC--eEEEEe
Confidence 9999999999999999999999999999999999 56699999999996699999999999999998 98 999999
Q ss_pred eCHHHHhccceeeeecCccCeEEEEEECCeecCCCCchHHHHHHHHHHHHHhhcCCC----Ccceec
Q 019488 274 LTVDEAKGAAEMMYVGSTLPLLAITVWDEQPIGDGNVGELTMALSDLLWEDMVAGPE----TQRHCV 336 (340)
Q Consensus 274 i~~~dL~~adEvfltnS~~gI~pV~~id~~~~~~g~~gp~t~~L~~~~~~~i~~~~~----~~~~~~ 336 (340)
++++||.+|||+|+|||++||+||.+||++.++.|++||+|++|++.|. +++.|.. .|.+||
T Consensus 263 i~~~eL~~adevf~tns~~~v~PV~~Id~~~~~~g~~g~vt~~L~~~~~-~~~~g~~~~~~~W~~~v 328 (328)
T 3u0g_A 263 ITRDEVYTADEAFFTGTAAEVTPIRELDNRTIGGGARGPITEKLQSAFF-DVVNGKSAKHADWLTKI 328 (328)
T ss_dssp CCHHHHHTCSEEEEEETTTEEEEEEEETTEECTTSSCCHHHHHHHHHHH-HHHTTCCSTTGGGEEEC
T ss_pred CCHHHHhhCCEEEEEcchhhEEEEEEECCEECCCCCCCHHHHHHHHHHH-HHHcCCCCCCCCCceeC
Confidence 9999999999999999999999999999999998899999999999998 7888866 455554
No 3
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A*
Probab=100.00 E-value=4.7e-62 Score=462.84 Aligned_cols=284 Identities=24% Similarity=0.353 Sum_probs=252.7
Q ss_pred cceeCCEEeCCCcceeccCCcccccccceeeeeeeeCC----eecCHHhHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Q 019488 46 SSIFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILNG----YLYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLT 121 (340)
Q Consensus 46 ~~~~nG~~~~~~~~~i~~~drg~~yG~gvFEtlrv~~G----~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~li 121 (340)
.+|+||++++.+++.|++.||||+||||+|||||+++| ++|+|++|++||.+||+.|+|+.|++.+++.+.+.+++
T Consensus 7 ~~~~nG~~~~~~~~~i~~~d~g~~yG~gvFEtir~~~g~~g~~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~~~~ 86 (308)
T 2eiy_A 7 LIWMNGAFVPQEEAKTSVLSHALHYGTSVFEGIRAYETAKGPAIFRLKEHVKRFYNSAKVLRMEIPFAPEELEEAIKEVV 86 (308)
T ss_dssp SEEETTEEECGGGCCCCTTCHHHHHCCEEECCEEEECCTTSCEEETHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHH
T ss_pred eEEECCEEeEhHHCccCccchHhhhcceEEEEEEEECCCCcccccCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 36999999999999999999999999999999999999 99999999999999999999988899999999999999
Q ss_pred HHcCCCCceEEEEEecCCCCCccCCCCCCCceEEEEEEcCCC-Cc---CCCCcEEEEeeeecCC--CCCCCccccC-Chh
Q 019488 122 AASQCKKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDF-SQ---CKEGVKVITSSIPMKP--RLFATVKNVN-YLP 194 (340)
Q Consensus 122 ~~~~~~~~~lRi~vt~G~g~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~gv~l~~~~~~~~~--~~~~~~Kt~n-yl~ 194 (340)
+.++..+++||+++++|.+.+++.|.....+.+++.+.+.+. .. +.+|+++.++++.|.. +.++++|++| |+.
T Consensus 87 ~~~~~~~~~iR~~v~~g~~~~~~~p~~~~~~~~~i~~~p~~~~~~~~~~~~gv~l~~~~~~r~~~~~~~~~~Kt~~ny~~ 166 (308)
T 2eiy_A 87 RRNGYRSCYIRPLAWMGAKALGVNPLPNNPAEVMVAAWEWGAYLGEEAVRKGARLITSSWARFPANVMPGKAKVGGNYVN 166 (308)
T ss_dssp HHTTCSSEEEEEEEECCSSCCSSCCGGGCSCEEEEEEEEC--------CCSCEEEEECSSCBCCTTTSCTTSCBGGGHHH
T ss_pred HhCCCCcEEEEEEEEecCCccCcCCCCCCCeEEEEEEEEcCccCCcccccCCeEEEEecceecCCCCcCcceehhhhHHH
Confidence 998877899999999997777776542235677777766442 11 3579999998876643 3468999988 999
Q ss_pred HHHHHHHHHHcCCCEEEEEcCCCcEEecCCceEEEEEeCCEEEcCCCCCccccHHHHHHHHHhhhhhhCCCcceEEEEee
Q 019488 195 NVLAKMEAEDKGASASIWIDEDGYVAEGPNVNVAFITHDKELVLPFFDKILSGCTAKRLLELAPKLVEQGRLKSVKTANL 274 (340)
Q Consensus 195 ~~la~~eA~~~G~de~Llld~~G~V~E~s~sNi~fv~k~~~l~TP~l~~iL~GItR~~ll~la~~~~~~G~~~~v~E~~i 274 (340)
+++++++|+++|+||+||+|.+|+|+|++++|| |+++||+|+|||++.+|+||||+.||++|+++ |+ +|+|+.+
T Consensus 167 ~~la~~~A~~~G~de~l~ld~~G~V~Egs~sNi-f~v~~g~l~TP~~~~iL~GitR~~ll~~a~~~---g~--~v~E~~i 240 (308)
T 2eiy_A 167 SALAKMEAVAAGADEALLLDEEGYVAEGSGENL-FFVRDGVIYALEHSVNLEGITRDSVIRIAKDL---GY--EVQVVRA 240 (308)
T ss_dssp HHHHHHHHHHTTCSEEEEEBTTSSEEEESSCEE-EEEETTEEEEECCTTSCCCHHHHHHHHHHHHT---TC--CEEEECC
T ss_pred HHHHHHHHHHcCCCEEEEECCCCeEEEcCceEE-EEEECCEEEeCCcCCCCchHHHHHHHHHHHHC---CC--eEEEEeC
Confidence 999999999999999999999999999999999 56699999999985599999999999999998 97 9999999
Q ss_pred CHHHHhccceeeeecCccCeEEEEEECCeecCCCCchHHHHHHHHHHHHHhhcCCC----Ccceec
Q 019488 275 TVDEAKGAAEMMYVGSTLPLLAITVWDEQPIGDGNVGELTMALSDLLWEDMVAGPE----TQRHCV 336 (340)
Q Consensus 275 ~~~dL~~adEvfltnS~~gI~pV~~id~~~~~~g~~gp~t~~L~~~~~~~i~~~~~----~~~~~~ 336 (340)
+++||.+|||+|+|||++||+||.+||++.++.|++||+|++|+++|. +++.|.. .|.+||
T Consensus 241 ~~~dL~~adevfltns~~gv~pV~~id~~~~~~g~~g~~~~~l~~~~~-~~~~~~~~~~~~w~~~v 305 (308)
T 2eiy_A 241 TRDQLYMADEVFMTGTAAEVTPVSMIDWRPIGKGTAGPVALRLREVYL-EAVTGRRPEYEGWLTYV 305 (308)
T ss_dssp CHHHHHTCSEEEEEETTTEEEEEEEETTEECTTSSCCHHHHHHHHHHH-HHHTTCCGGGGGGEEEC
T ss_pred CHHHHhhCCEEEEccCcceEEEEEEEcCEECCCCCCCHHHHHHHHHHH-HHHcCCCCCccCCCeeC
Confidence 999999999999999999999999999999998889999999999998 6777765 566665
No 4
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A*
Probab=100.00 E-value=1.7e-61 Score=459.10 Aligned_cols=283 Identities=21% Similarity=0.302 Sum_probs=252.8
Q ss_pred ceeCCEEeCCCcceeccCCcccccccceeeeeeee---CC-eecCHHhHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Q 019488 47 SIFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIIL---NG-YLYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLTA 122 (340)
Q Consensus 47 ~~~nG~~~~~~~~~i~~~drg~~yG~gvFEtlrv~---~G-~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~li~ 122 (340)
+|+||++++.+++.|++.||||+||||+|||||++ +| ++|+|++|++||.+||+.|+|+.|++.+++.+.+.++++
T Consensus 9 ~~~ng~~~~~~~~~i~~~d~g~~yG~gvFEtir~~~~~~G~~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~~~~~ 88 (309)
T 1iye_A 9 IWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGPVVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIR 88 (309)
T ss_dssp EEETTEEEEGGGCCCCTTCHHHHHCCEEECCEEEECCTTSSEEETHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHHHHH
T ss_pred EEECCEEEEhHHcccCccchHHhccceeEEEEEEEECCCCcEEcCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999999 99 999999999999999999999888999999999999999
Q ss_pred HcCCCCceEEEEEecCCCCCccCCCCCCCceEEEEEEcCCC-CcC---CCCcEEEEeeeecCCC--CCCCccc-cCChhH
Q 019488 123 ASQCKKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDF-SQC---KEGVKVITSSIPMKPR--LFATVKN-VNYLPN 195 (340)
Q Consensus 123 ~~~~~~~~lRi~vt~G~g~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~gv~l~~~~~~~~~~--~~~~~Kt-~nyl~~ 195 (340)
.++..+++||+++++|.+.+++.|.....+.+++.+.+.+. .+. .+|+++.++++.|..+ .++++|+ +||+.+
T Consensus 89 ~~~~~~~~iR~~v~~g~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~~gv~l~~~~~~r~~~~~~~~~~K~~~ny~~~ 168 (309)
T 1iye_A 89 KNNLTSAYIRPLIFVGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSS 168 (309)
T ss_dssp HTTCSSEEEEEEEEECSSCSSSSCCTTCCEEEEEEEECCCCTTCTTHHHHCEEEEECSSCCCCTTTSCTTSCBGGGHHHH
T ss_pred hcCCCCEEEEEEEEeCCCccCCCCCCCCCcEEEEEEEEcCccCCcccccCCeEEEEeeeeccCCCCCCccccchhhhHHH
Confidence 98878899999999998777776543336677776665442 221 3699999988766532 3579997 699999
Q ss_pred HHHHHHHHHcCCCEEEEEcCCCcEEecCCceEEEEEeCCEEEcCCCC-CccccHHHHHHHHHhhhhhhCCCcceEEEEee
Q 019488 196 VLAKMEAEDKGASASIWIDEDGYVAEGPNVNVAFITHDKELVLPFFD-KILSGCTAKRLLELAPKLVEQGRLKSVKTANL 274 (340)
Q Consensus 196 ~la~~eA~~~G~de~Llld~~G~V~E~s~sNi~fv~k~~~l~TP~l~-~iL~GItR~~ll~la~~~~~~G~~~~v~E~~i 274 (340)
++++++|+++|+||+||+|.+|+|+|++++|| |+++||+|+|||++ ++|+||||+.||++|+++ |+ +|+|+.+
T Consensus 169 ~la~~~A~~~G~de~l~ld~~G~V~Egs~sNi-f~v~~g~l~TP~l~~~iL~GitR~~ll~~a~~~---g~--~v~E~~i 242 (309)
T 1iye_A 169 LLVGSEARRHGYQEGIALDVNGYISEGAGENL-FEVKDGVLFTPPFTSSALPGITRDAIIKLAKEL---GI--EVREQVL 242 (309)
T ss_dssp HHHHHHHHHTTCSEEEEECTTSBEEEETTBEE-EEEETTEEEECCGGGTCCCCHHHHHHHHHHHHT---TC--CEEECCC
T ss_pred HHHHHHHHHcCCCEEEEECCCCcEEEcCceEE-EEEECCEEECCCCCCCCCCCHHHHHHHHHHHHc---CC--eEEEEeC
Confidence 99999999999999999999999999999999 66699999999996 799999999999999998 87 9999999
Q ss_pred CHHHHhccceeeeecCccCeEEEEEECCeecCCCCchHHHHHHHHHHHHHhhcCCC----Ccceec
Q 019488 275 TVDEAKGAAEMMYVGSTLPLLAITVWDEQPIGDGNVGELTMALSDLLWEDMVAGPE----TQRHCV 336 (340)
Q Consensus 275 ~~~dL~~adEvfltnS~~gI~pV~~id~~~~~~g~~gp~t~~L~~~~~~~i~~~~~----~~~~~~ 336 (340)
+++||.+|||+|+|||++||+||.+||++.++.|++||++++|+++|. +++.|.. .|.++|
T Consensus 243 ~~~eL~~adevfltns~~gv~PV~~id~~~~~~g~~g~~~~~l~~~~~-~~~~g~~~~~~~w~~~v 307 (309)
T 1iye_A 243 SRESLYLADEVFMSGTAAEITPVRSVDGIQVGEGRCGPVTKRIQQAFF-GLFTGETEDKWGWLDQV 307 (309)
T ss_dssp BTTHHHHCSEEEEEETTTEEEEEEEETTEECTTSSCCHHHHHHHHHHH-GGGTTSSCCCSCCEEEC
T ss_pred CHHHHhhCcEEEEccCCCEEEEEEEECCEECCCCCCCHHHHHHHHHHH-HHHcCCCCccCCCCeEC
Confidence 999999999999999999999999999999998889999999999998 6787765 566665
No 5
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila}
Probab=100.00 E-value=4.1e-61 Score=448.83 Aligned_cols=263 Identities=21% Similarity=0.222 Sum_probs=234.9
Q ss_pred cceeCCEEeCCCcceeccCCcccccccceeeeeeeeCCeecCHHhHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHcC
Q 019488 46 SSIFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILNGYLYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLTAASQ 125 (340)
Q Consensus 46 ~~~~nG~~~~~~~~~i~~~drg~~yG~gvFEtlrv~~G~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~li~~~~ 125 (340)
.+|+|| .+++.|+++||||+||||+|||||+++|++|+|++|++||.+||+.|+|+.|++.+++.+.+.++++.++
T Consensus 5 ~~~~nG----~~~a~i~~~d~g~~yG~gvFEtir~~~g~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~~~~~ 80 (272)
T 3lul_A 5 RVIEDK----GDMTPSFGIDDRIFLGEGLFETIRVNSSKPSFAYMHWERLGNSARQLGIPFEISFDDWFEHLIQKIQKDN 80 (272)
T ss_dssp EECCCC----C--CCCCCTTBGGGGTCEEEEEEEEETTEESSHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHTT
T ss_pred EEEECC----ccccccCCccchhhcceEeEEEEEEECCEeCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhcC
Confidence 369999 6788999999999999999999999999999999999999999999999988999999999999999998
Q ss_pred CCCceEEEEEecCCCCCccCCCCCCCceEEEEEEcCCCCcCCCCcEEEEeeeecC-CCCCCCccccCChhHHHHHHHHHH
Q 019488 126 CKKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDFSQCKEGVKVITSSIPMK-PRLFATVKNVNYLPNVLAKMEAED 204 (340)
Q Consensus 126 ~~~~~lRi~vt~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~l~~~~~~~~-~~~~~~~Kt~nyl~~~la~~eA~~ 204 (340)
..+++||+++++|.+.+++.++....|+++++ . |+++...++++.++++++. ++.++++|++||+.+++++++|++
T Consensus 81 ~~~~~irl~v~rg~~~~g~~~~~~~~~~~~~~-~--p~~~~~~~v~l~~~~~~r~~~~~~~~~Kt~nyl~~~la~~~A~~ 157 (272)
T 3lul_A 81 LYHGGIKAILSGGPASRGLAERGQVSQLIFQT-F--NYSIQKHPVRLISINWLRDKANPLYQLKSVNYLEAIIAQRQAIA 157 (272)
T ss_dssp CSSEEEEEEEECCBCCSSTTCCCSSEEEEEEE-E--CCCCCCSCEEEEEEEEEECTTCGGGGSCBSCCHHHHHHHHHHHH
T ss_pred CCCEEEEEEEEecCCccCcCCCCCCCcEEEEE-E--CCCCccccEEEEEEeEEecCCCcccchhhhccHHHHHHHHHHHH
Confidence 88999999999998877776655455676655 3 4433334589988888885 456789999999999999999999
Q ss_pred cCCCEEEEEcCCCcEEecCCceEEEEEeCCEEEcCCCC-CccccHHHHHHHHHhhhhhhCCCcceEEEEeeCHHHHhccc
Q 019488 205 KGASASIWIDEDGYVAEGPNVNVAFITHDKELVLPFFD-KILSGCTAKRLLELAPKLVEQGRLKSVKTANLTVDEAKGAA 283 (340)
Q Consensus 205 ~G~de~Llld~~G~V~E~s~sNi~fv~k~~~l~TP~l~-~iL~GItR~~ll~la~~~~~~G~~~~v~E~~i~~~dL~~ad 283 (340)
+|+||+||+|.+|+|+|++++|| |+++||+|+|||++ ++|+||||+.|+++|+++ |+ +|+|+.++++||.+||
T Consensus 158 ~G~de~L~ld~~g~v~E~~~sNi-f~~~~g~l~TP~l~~~iL~GitR~~ll~la~~~---g~--~v~e~~i~~~el~~ad 231 (272)
T 3lul_A 158 VGADDALFFNTENHVTETTCANL-FLIENNILYTPRVEDGILPGITRARLISHCQQH---KM--SVQEISLTKKRIEDAD 231 (272)
T ss_dssp TTCSEEEEEETTSBEEEESSCEE-EEEETTEEEECCGGGTCCCCHHHHHHHHHHHHT---TC--CEEECCCBHHHHHTCS
T ss_pred cCCCEEEEECCCCeEEEcCCeEE-EEEECCEEECCCCccCcCcCHHHHHHHHHHHHc---CC--eEEEEECCHHHHhhCC
Confidence 99999999999999999999999 55699999999985 899999999999999998 87 9999999999999999
Q ss_pred eeeeecCccCeEEEEEECCeecCCCCchHHHHHHHHHHHHHhhc
Q 019488 284 EMMYVGSTLPLLAITVWDEQPIGDGNVGELTMALSDLLWEDMVA 327 (340)
Q Consensus 284 EvfltnS~~gI~pV~~id~~~~~~g~~gp~t~~L~~~~~~~i~~ 327 (340)
|+|+|||++||+||.+||++.++. |++|++.|.+.++.
T Consensus 232 evf~~ns~~~v~PV~~id~~~~~~------t~~l~~~y~~~~~~ 269 (272)
T 3lul_A 232 AVFLTNSLQGIRRVLSLDNIIFEV------NHPIIDKLIFLLNQ 269 (272)
T ss_dssp EEEEEETTTEEEEEEEETTEECCC------CCHHHHHHHHHHHH
T ss_pred EEEEEcCchhEEEEEEECCEEcch------HHHHHHHHHHHHhh
Confidence 999999999999999999999964 88999999865543
No 6
>4dqn_A Putative branched-chain amino acid aminotransfera; aminotransferase, transferase; 1.97A {Streptococcus mutans}
Probab=100.00 E-value=6.1e-61 Score=460.89 Aligned_cols=280 Identities=20% Similarity=0.177 Sum_probs=248.1
Q ss_pred eeCCEEeCCCcceeccCCcccccccceeeeeeeeCCe-----ecCHHhHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Q 019488 48 IFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILNGY-----LYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLTA 122 (340)
Q Consensus 48 ~~nG~~~~~~~~~i~~~drg~~yG~gvFEtlrv~~G~-----~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~li~ 122 (340)
|+||++++.+++.|++.||||+||||||||||+++|+ +|+|++|++||.+||+.|+|+ +++.++|.++|.++++
T Consensus 34 w~nG~~vp~~~~~i~~~d~gl~yGdgvFE~ir~~~g~dg~~~~f~l~~Hl~RL~~Sa~~L~i~-~~~~~~l~~~i~~lv~ 112 (345)
T 4dqn_A 34 WDDGKLTEDATLHISESSPALHYGQEAFEGLKAYRTKDGSVQLFRPNMNAERLQRTADRLLMP-QVPTDKFIDAAKQVVR 112 (345)
T ss_dssp ECCCEEESCCSCCCCTTCHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCC-CCCHHHHHHHHHHHHH
T ss_pred EECCEEeEhhhcccCccccccccccEEEEEEEEEeCCCCcccccCHHHHHHHHHHHHHHhCCC-CCCHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999887 999999999999999999998 7899999999999999
Q ss_pred HcCC--------CCceEEEEEecCCCCCccCCCCCCCceEEEEEEcCCC-C-cCCCCcEEEEee-eecC-CCCCCCccc-
Q 019488 123 ASQC--------KKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDF-S-QCKEGVKVITSS-IPMK-PRLFATVKN- 189 (340)
Q Consensus 123 ~~~~--------~~~~lRi~vt~G~g~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~gv~l~~~~-~~~~-~~~~~~~Kt- 189 (340)
+|+. .+++||++++++.+.+++.|+. .+++++++.|.+. . ...+|+++.+++ +.|. ++.++++|+
T Consensus 113 ~n~~~vp~~~~~~~~yiR~~v~~~~~~~g~~p~~--~~~~~i~~~p~~~~~~~~~~gv~l~~~~~~~R~~~~~~~~~Kt~ 190 (345)
T 4dqn_A 113 ANEEYVPPYGTGATLYLRPLLIGVGDVIGVHPAD--EYIFTIFAMPVGNYFKGGLAPTNFLIQDDYDRAAPHGTGAAKVG 190 (345)
T ss_dssp HTGGGSCCTTSSCEEEEEEEEEEESCCCSSCCCS--EEEEEEEEEEECCSCTTSCCCEEEEECTTCCSSCTTSSTTSCCH
T ss_pred hccccCCCCCCCCcEEEEEEEEeCCCccCCCCCC--CeEEEEEEEECccccccCCCCEEEEEccceEecCCCcccccccc
Confidence 9864 3569999999987777776653 5677777766432 2 235799999987 5664 456799998
Q ss_pred cCChhHHHHHHHHHHcCCCEEEEEcC--CCcEEecCCceEEEEEeCCEEEcCCCCCccccHHHHHHHHHhhh-hhhCCCc
Q 019488 190 VNYLPNVLAKMEAEDKGASASIWIDE--DGYVAEGPNVNVAFITHDKELVLPFFDKILSGCTAKRLLELAPK-LVEQGRL 266 (340)
Q Consensus 190 ~nyl~~~la~~eA~~~G~de~Llld~--~G~V~E~s~sNi~fv~k~~~l~TP~l~~iL~GItR~~ll~la~~-~~~~G~~ 266 (340)
+||+++++|+++|+++|+||+||+|. +|+|+|++++||||+.+||+|+|||..+||+||||+.||++|++ + |+
T Consensus 191 ~nyl~~vla~~eA~~~G~de~l~ld~~~~g~v~E~~~sNif~v~~~g~l~TP~~~~iL~GitR~~vl~la~~~~---g~- 266 (345)
T 4dqn_A 191 GNYAASLLPGKVAHERQFSDVIYLDPATHTKIEEVGSANFFGITKDNEFITPLSPSILPSVTKYSLLYLAEHRF---GM- 266 (345)
T ss_dssp HHHHHHHHHHHHHHHTTCSCEEEECTTTSCBEEEETTEEEEEEETTCEEEECCCTTSCCCHHHHHHHHHHHHTT---CC-
T ss_pred ccCHHHHHHHHHHHHCCCCEEEEEcCCCCCeEEEcCCceEEEEecCCEEEeCCCCCccHHHHHHHHHHHHHhcc---CC-
Confidence 99999999999999999999999998 69999999999954448999999993379999999999999999 8 98
Q ss_pred ceEEEEeeCHHHHhccceeeeecCccCeEEEEEECCe----ecCCC-CchHHHHHHHHHHHHHhhcCCC----Ccceec
Q 019488 267 KSVKTANLTVDEAKGAAEMMYVGSTLPLLAITVWDEQ----PIGDG-NVGELTMALSDLLWEDMVAGPE----TQRHCV 336 (340)
Q Consensus 267 ~~v~E~~i~~~dL~~adEvfltnS~~gI~pV~~id~~----~~~~g-~~gp~t~~L~~~~~~~i~~~~~----~~~~~~ 336 (340)
+|+|+.++++||.+|||+|+|||++||+||.+||++ .++.+ ++||+|++|++.|. +|+.|.. .|.++|
T Consensus 267 -~v~e~~i~~~el~~adevf~t~t~~~i~PV~~Id~~~~~~~i~~~~~~Gpvt~~L~~~~~-~i~~g~~~~~~~W~~~v 343 (345)
T 4dqn_A 267 -KAIEGDVCVDELDKFVEAGACGTAAVISPIGGVQHGDDFHVFYSETEVGPVTHKLYDELT-GIQFGDVKAPEGWIYKV 343 (345)
T ss_dssp -EEEECCCBTTCGGGEEEEEEEETTTEEEEEEEEEETTEEEESSCSSSCCHHHHHHHHHHH-HHHTTSSCCCTTCEEET
T ss_pred -eEEEEeCCHHHHHhhhHHhhhcchhHEEEEEEECcccceeeeCCCCCcCHHHHHHHHHHH-HHHcCCCCCCCCCceEC
Confidence 999999999999999999999999999999999998 88765 69999999999998 7999976 455554
No 7
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A*
Probab=100.00 E-value=3.2e-60 Score=442.11 Aligned_cols=260 Identities=20% Similarity=0.285 Sum_probs=234.7
Q ss_pred ceeCCEEeCCCcceeccCCcccccccceeeeeeeeCCeecCHHhHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHcCC
Q 019488 47 SIFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILNGYLYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLTAASQC 126 (340)
Q Consensus 47 ~~~nG~~~~~~~~~i~~~drg~~yG~gvFEtlrv~~G~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~li~~~~~ 126 (340)
+|+||+ .++.|+++||||+||||+|||||+++|++|+|++|++||.+||+.|+|+.| +.+++.+.+.++++.+
T Consensus 2 ~~~nG~----~~~~i~~~d~g~~yG~gvfEtir~~~G~~~~l~~Hl~RL~~Sa~~l~~~~~-~~~~l~~~i~~~~~~~-- 74 (269)
T 1i2k_A 2 FLINGH----KQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIQRLQDACQRLMISCD-FWPQLEQEMKTLAAEQ-- 74 (269)
T ss_dssp EEETTE----EESCCCTTCHHHHHCCEEEEEEEEETTEETTHHHHHHHHHHHHHHTTCCCC-CHHHHHHHHHHHHHHH--
T ss_pred EEECCC----cCCccCccccccccceeEEEEEEEECCEEecHHHHHHHHHHHHHhcCCCCC-CHHHHHHHHHHHHHhC--
Confidence 689999 356799999999999999999999999999999999999999999999877 8999999999998865
Q ss_pred CCceEEEEEecCCCCCccCCCCCCCceEEEEEEcCCCCc---CCCCcEEEEeeeecC-CCCCCCccccCChhHHHHHHHH
Q 019488 127 KKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDFSQ---CKEGVKVITSSIPMK-PRLFATVKNVNYLPNVLAKMEA 202 (340)
Q Consensus 127 ~~~~lRi~vt~G~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~gv~l~~~~~~~~-~~~~~~~Kt~nyl~~~la~~eA 202 (340)
.+++||++|++|.+++++.|..+..+++++.+.|.+... ..+|+++.+++.++. ++.++++|++||+.+++++++|
T Consensus 75 ~~~~iR~~v~~g~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~Kt~n~~~~~~a~~~A 154 (269)
T 1i2k_A 75 QNGVLKVVISRGSGGRGYSTLNSGPATRILSVTAYPAHYDRLRNEGITLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHL 154 (269)
T ss_dssp CSEEEEEEEECCSCCSTTCCTTCCCCEEEEEEECCCSHHHHHHHHCEEEEECSCCBCCCTTTTBCCBSCCHHHHHHHHHH
T ss_pred CCeEEEEEEEcCCCCCCCCCccCCCcEEEEEEEECCCcchhhhcCCeEEEEeceecCCCCcccCcchhhhHHHHHHHHHH
Confidence 478999999999887777776556788888777655321 357999999876664 4467899999999999999999
Q ss_pred HHcCCCEEEEEcCCCcEEecCCceEEEEEeCCEEEcCCCC-CccccHHHHHHHHHhhhhhhCCCcceEEEEeeCHHHHhc
Q 019488 203 EDKGASASIWIDEDGYVAEGPNVNVAFITHDKELVLPFFD-KILSGCTAKRLLELAPKLVEQGRLKSVKTANLTVDEAKG 281 (340)
Q Consensus 203 ~~~G~de~Llld~~G~V~E~s~sNi~fv~k~~~l~TP~l~-~iL~GItR~~ll~la~~~~~~G~~~~v~E~~i~~~dL~~ 281 (340)
+++|+||+||+|.+|+|+|++++|| |+++||+|+|||++ ++|+||||+.|+++|+++ |+ +|+|+.++++||.+
T Consensus 155 ~~~G~de~l~ld~~G~v~E~s~sNi-f~v~~g~l~TP~~~~~iL~GitR~~ll~~a~~~---g~--~v~e~~i~~~eL~~ 228 (269)
T 1i2k_A 155 EQTNADEALVLDSEGWVTECCAANL-FWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQS---SY--QLVEVQASLEESLQ 228 (269)
T ss_dssp TTSSCSEEEEEBTTSBEEECSSSEE-EEEETTEEEEECCSSSSBCCHHHHHHHHHHHHS---SS--EEEEECCBHHHHHT
T ss_pred HHCCCCEEEEECCCCcEEEcCceEE-EEEECCEEECCCCccCccCCHHHHHHHHHHHHc---CC--eEEEEECCHHHHhh
Confidence 9999999999999999999999999 66699999999996 799999999999999998 97 99999999999999
Q ss_pred cceeeeecCccCeEEEEEECCeecCCCCchHHHHHHHHHHH
Q 019488 282 AAEMMYVGSTLPLLAITVWDEQPIGDGNVGELTMALSDLLW 322 (340)
Q Consensus 282 adEvfltnS~~gI~pV~~id~~~~~~g~~gp~t~~L~~~~~ 322 (340)
|||+|+|||++||+||.+||++.++. ||++++|++.|.
T Consensus 229 adevfltns~~gv~pV~~id~~~~~~---g~~~~~l~~~~~ 266 (269)
T 1i2k_A 229 ADEMVICNALMPVMPVCACGDVSFSS---ATLYEYLAPLCE 266 (269)
T ss_dssp CSEEEEECSSSCEEEEEEETTEECCC---CHHHHHHHHHHH
T ss_pred CCEEEEcCChhheEEEEEECCEEecC---cHHHHHHHHHHh
Confidence 99999999999999999999999964 799999999986
No 8
>2xpf_A 4-amino-4-deoxychorismate lyase; para-aminobenzoic acid, folate biosynthesis; HET: PLP PG4; 1.75A {Pseudomonas aeruginosa} PDB: 2y4r_A* 2xpf_B*
Probab=100.00 E-value=6.9e-60 Score=444.75 Aligned_cols=264 Identities=25% Similarity=0.311 Sum_probs=237.5
Q ss_pred cceeCCEEeCCCcceeccCCcccccccceeeeeeeeCCeecCHHhHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHcC
Q 019488 46 SSIFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILNGYLYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLTAASQ 125 (340)
Q Consensus 46 ~~~~nG~~~~~~~~~i~~~drg~~yG~gvFEtlrv~~G~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~li~~~~ 125 (340)
.+|+||+++ +.|++.||||+||||+|||||+++|++++|++|++||.+||+.|+|+.| .+++.+.+.++++..
T Consensus 23 ~~~~nG~~~----~~i~~~d~g~~yGdgvFEtir~~~G~~~~l~~Hl~RL~~Sa~~l~~~~~--~~~l~~~i~~~v~~~- 95 (292)
T 2xpf_A 23 LDWVDGRPA----AELSVRDRGLAYGDGLFETLAVRAGTPRLLERHLARLEEGCRRLAIPLD--TAALRQELLAFCAAL- 95 (292)
T ss_dssp CEEETTEEC----SEEETTBHHHHHCCEEEEEEEEETTEETTHHHHHHHHHHHHHHTTCCCC--HHHHHHHHHHHHHHH-
T ss_pred EEEECCEEE----EEEcccchhhhcCcEeEEEEEEECCEECCHHHHHHHHHHHHHhcCCCCC--HHHHHHHHHHHHHhC-
Confidence 479999998 6799999999999999999999999999999999999999999999754 889999999998873
Q ss_pred CCCceEEEEEecCCCCCccCCCCCCCceEEEEEEcCCCCc---CCCCcEEEEeeeecC-CCCCCCccccCChhHHHHHHH
Q 019488 126 CKKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDFSQ---CKEGVKVITSSIPMK-PRLFATVKNVNYLPNVLAKME 201 (340)
Q Consensus 126 ~~~~~lRi~vt~G~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~gv~l~~~~~~~~-~~~~~~~Kt~nyl~~~la~~e 201 (340)
.+++||++|++|.+.+++.|..+..|++++.+.|.|... ..+|+++.+++.++. ++.++++|++||+.+++++++
T Consensus 96 -~~~~iR~~v~rg~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~gv~l~~~~~~~~~~~~~~~~Kt~ny~~~~la~~~ 174 (292)
T 2xpf_A 96 -GDGVAKLIVTRGEGLRGYAPPAEASPRRILSGSPRPAYPERHWQQGVRLFACRTRLAEQPLLAGLKHLNRLEQVLARAE 174 (292)
T ss_dssp -CSEEEEEEEECCBCCSSSSCCTTCCCEEEEEEECCCCCCHHHHHTCEEEEECCCCBCCCTTTTBCCBSCCHHHHHHHTT
T ss_pred -CCcEEEEEEEecCCCCCCCCCCCCCcEEEEEEEECCccchhhccCCeEEEEeeeeccCCCCCCCcchhhhHHHHHHHHH
Confidence 578999999999887787776556788888777655432 357999999887654 446789999999999999999
Q ss_pred HHHcCCCEEEEEcCCCcEEecCCceEEEEEeCCEEEcCCCC-CccccHHHHHHHHHhhhhhhCCCcceEEEEeeCHHHHh
Q 019488 202 AEDKGASASIWIDEDGYVAEGPNVNVAFITHDKELVLPFFD-KILSGCTAKRLLELAPKLVEQGRLKSVKTANLTVDEAK 280 (340)
Q Consensus 202 A~~~G~de~Llld~~G~V~E~s~sNi~fv~k~~~l~TP~l~-~iL~GItR~~ll~la~~~~~~G~~~~v~E~~i~~~dL~ 280 (340)
|+++|+||+||+|.+|+|+|++++|| |+++||+|+|||++ ++|+||||+.||++|+++ |+ +|+|+.++++||.
T Consensus 175 A~~~G~de~L~ld~~G~V~Egs~sNi-f~v~~g~l~TPpl~~~iL~GitR~~vl~~a~~~---G~--~v~E~~i~~~eL~ 248 (292)
T 2xpf_A 175 WSDAGHAEGLMLDVHERVVEGVFSNL-LLVLDGTLVAPDLRRCGVAGVMRAELLERAEGI---GV--PLAIRDVSMAELA 248 (292)
T ss_dssp CCCTTCSEEEEEBTTCCEEEESSSEE-EEEETTEEEEECCSSSSBCCHHHHHHHHHHHHT---TC--CEEEECBCHHHHH
T ss_pred HHHcCCCEEEEECCCCCEEEcCCeEE-EEEECCEEEeCCCCCccCCCHHHHHHHHHHHHc---CC--eEEEEeCCHHHHH
Confidence 99999999999999999999999999 66799999999986 799999999999999998 98 9999999999999
Q ss_pred ccceeeeecCccCeEEEEEECCeecCCCCchHHHHHHHHHHHHHhh
Q 019488 281 GAAEMMYVGSTLPLLAITVWDEQPIGDGNVGELTMALSDLLWEDMV 326 (340)
Q Consensus 281 ~adEvfltnS~~gI~pV~~id~~~~~~g~~gp~t~~L~~~~~~~i~ 326 (340)
+|||+|+|||++||+||.+||++.++ +||+|++|++.|.+++.
T Consensus 249 ~adevfltns~~gv~PV~~id~~~~~---~g~~t~~l~~~~~~~~~ 291 (292)
T 2xpf_A 249 TADEVFLCNSQFGIWPVRALDEHVWP---VGELTRKLQDQLRDDLD 291 (292)
T ss_dssp TCSEEEEEETTTEEEEEEEETTEECC---CCHHHHHHHHHHHHHHC
T ss_pred hCCEEEEEcCcccEEEEEEECCEEeC---CCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999995 57999999999987653
No 9
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum}
Probab=100.00 E-value=2.2e-59 Score=445.08 Aligned_cols=265 Identities=23% Similarity=0.288 Sum_probs=205.2
Q ss_pred cccccceeC---CEE--eCCCcceeccCCcccccccceeeeeeeeCCeecCHHhHHHHHHHHHHHcCCCCCCCHHHHHHH
Q 019488 42 PAMYSSIFG---GII--LDPAMMVIPIDDHMVHRGHGVFDTAIILNGYLYELDVHLDRFLRSAVSARISSPFPRSTLRSI 116 (340)
Q Consensus 42 ~~~~~~~~n---G~~--~~~~~~~i~~~drg~~yG~gvFEtlrv~~G~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~ 116 (340)
++.-.+|+| |++ ++.+++.|+++||||+||||||||||+++|++|+|++|++||.+||+.|+|+.| +.+++++.
T Consensus 12 ~~~~~v~~n~~~G~~~~~~~~~a~i~~~Drg~~yGdgvFEtirv~~G~~~~l~~Hl~RL~~Sa~~L~i~~p-~~~~l~~~ 90 (315)
T 3sno_A 12 PTPVILIVEPYGGSIRQQNPNLPMVFWDDAALTRGDGIFETLLIRDGHACNVRRHGERFKASAALLGLPEP-ILEDWEKA 90 (315)
T ss_dssp CCCEEEEECSTTCCEEEECTTSCCCCTTBTTTTTCCEEEEEEEEETTEETTHHHHHHHHHHHHHHHTCCCC-CHHHHHHH
T ss_pred CCCEEEEEECCCCeEEEeeHHHCcccccchHhhcCCEeEEEEEEECCEECCHHHHHHHHHHHHHHhCCCCc-CHHHHHHH
Confidence 344468999 999 999999999999999999999999999999999999999999999999999877 89999999
Q ss_pred HHHHHHH----cCCCCceEEEEEecCCCCCccCCCCCCCceEEEEEEcCCCCc---CCCCcEEEEeeeec----------
Q 019488 117 LVQLTAA----SQCKKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDFSQ---CKEGVKVITSSIPM---------- 179 (340)
Q Consensus 117 i~~li~~----~~~~~~~lRi~vt~G~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~gv~l~~~~~~~---------- 179 (340)
+.++++. |+..+++||+++++|.+.++ .|++++++.+.+... ..+|+++.+++.+.
T Consensus 91 i~~~v~~~~~~n~~~~~~iRl~vtrG~~~~g-------~p~~~v~~~p~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~~ 163 (315)
T 3sno_A 91 TQMGIESWYSHPNAGEASCTWTLSRGRSSTG-------LASGWLTITPVSSDKLAQREHGVSVMTSSRGYSIDTGLPGIG 163 (315)
T ss_dssp HHHHHHHHHTC--CCCEEEEEEEECCBTTTC-------CCEEEEEEEECCHHHHHHHHHCEEEEEEEC------------
T ss_pred HHHHHHhhcccCCCCCEEEEEEEEeCCCCCC-------CCEEEEEEEECCCcchhhhcCCEEEEEecccccccccccccc
Confidence 9999987 56778999999999876543 356777776654322 35799988876321
Q ss_pred --------------CCCCCCCccccCChhHHHHHHHHHHcCCCEEEEEcCCCcEEecCCceEEEEEeCCEEEcCCCC-Cc
Q 019488 180 --------------KPRLFATVKNVNYLPNVLAKMEAEDKGASASIWIDEDGYVAEGPNVNVAFITHDKELVLPFFD-KI 244 (340)
Q Consensus 180 --------------~~~~~~~~Kt~nyl~~~la~~eA~~~G~de~Llld~~G~V~E~s~sNi~fv~k~~~l~TP~l~-~i 244 (340)
.++.++++||+||+.+++++++|+++|+||+||+|.+| |+|++++|| |+++||+|+|||++ ++
T Consensus 164 ~~~r~~~s~~~~~~~p~~l~~~Kt~nyl~~vla~~~A~~~G~de~l~l~~~G-v~E~s~sN~-f~~~~g~l~TPp~~~~i 241 (315)
T 3sno_A 164 KATRGELSKVERTPAPWLTVGAKTLAYAANMAALRYAKSNGFDDVIFTDGDR-VLEGATSTV-VSFKGDKIRTPSPGGDI 241 (315)
T ss_dssp -----------------------------------------CEEEEEEETTE-EEEESSSEE-EEEETTEEEEECCC---
T ss_pred ccccccccccccccCcccccCcchhccHHHHHHHHHHHHcCCCEEEEEeCCC-cEEcCCeeE-EEEECCEEEcCCCCCCc
Confidence 12346899999999999999999999999999999999 999999999 56699999999986 79
Q ss_pred cccHHHHHHHHHhhhhhhCCCcceEEEEeeCHHHHhccceeeeecCccCeEEEEEECCeecCCCCchHHHHHHHHHHHHH
Q 019488 245 LSGCTAKRLLELAPKLVEQGRLKSVKTANLTVDEAKGAAEMMYVGSTLPLLAITVWDEQPIGDGNVGELTMALSDLLWED 324 (340)
Q Consensus 245 L~GItR~~ll~la~~~~~~G~~~~v~E~~i~~~dL~~adEvfltnS~~gI~pV~~id~~~~~~g~~gp~t~~L~~~~~~~ 324 (340)
|+||||+.|+++|+++ |+ +|+|+.++++||.+|||+|+|||++||+||.+||++.|+ .+|++++|+++|++.
T Consensus 242 L~GitR~~ll~~a~~~---g~--~v~e~~i~~~eL~~adevfl~ns~~gv~pV~~id~~~~~---~~~~~~~l~~~~~~~ 313 (315)
T 3sno_A 242 LPGTTQAALFAHATEK---GW--RCKEKDLSIDDLFGADSVWLVSSVRGPVRVTRLDGHKLR---KPDNEKEIKALITKA 313 (315)
T ss_dssp ---HHHHHHHHHHHHT---TC--EEEEECCBHHHHHHSSEEEEEETTTEEEEEEEESSSCCC---CCTTHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHc---CC--EEEEEECCHHHHHhCCeeEEEcCcccEEEEEEECCEECC---CChHHHHHHHHHHHh
Confidence 9999999999999998 98 999999999999999999999999999999999999996 478999999999854
No 10
>3uzo_A Branched-chain-amino-acid aminotransferase; BCAT, amino-acid biosynthesis, branched-CH acid biosynthesis, pyridoxal phosphate, L-GLUT; HET: PLP GLU; 2.00A {Deinococcus radiodurans} PDB: 3uzb_A* 3uyy_A*
Probab=100.00 E-value=1.9e-58 Score=445.11 Aligned_cols=276 Identities=20% Similarity=0.205 Sum_probs=240.8
Q ss_pred ceeCCEEeCCCcceeccCCcccccccceeeeeeee---CCe--ecCHHhHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Q 019488 47 SIFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIIL---NGY--LYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLT 121 (340)
Q Consensus 47 ~~~nG~~~~~~~~~i~~~drg~~yG~gvFEtlrv~---~G~--~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~li 121 (340)
.|+||++++.+.+.|++.||||+||||||||||++ +|+ +|+|++|++||.+||+.|+|+ +++.++|.++|.+++
T Consensus 48 ~w~ng~i~p~~~~~i~~~d~gl~yGdgvFE~ir~y~~~dG~i~lfrl~~Hl~RL~~Sa~~L~ip-~~~~e~l~~~i~~lv 126 (358)
T 3uzo_A 48 EWDAGTLTEDNQIHLAEGSTALHYGQQCFEGLKAYRCADGSINLFRPDQNAARMRMSCRRLLMP-ELSDEQFIDACLQVV 126 (358)
T ss_dssp EECCCEEESCCEEEEETTCHHHHSCCEEECCEEEEECTTSCEEECCHHHHHHHHHHHHHHTTCC-CCCHHHHHHHHHHHH
T ss_pred cEECCEEeEcccceeChHHcceecCcEEEEEEEEEECCCCcEeecCHHHHHHHHHHHHHHhCCC-CCCHHHHHHHHHHHH
Confidence 38999999999999999999999999999999999 565 899999999999999999997 889999999999999
Q ss_pred HHcCC--------CCceEEEEEecCCCCCccCCCCCCCceEEEEEEcCC-CCc-CCCCcEEEEeeeecCCC-CCCCcc-c
Q 019488 122 AASQC--------KKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDD-FSQ-CKEGVKVITSSIPMKPR-LFATVK-N 189 (340)
Q Consensus 122 ~~~~~--------~~~~lRi~vt~G~g~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~gv~l~~~~~~~~~~-~~~~~K-t 189 (340)
+.++. .++|||++++++.+.+++.|.. .+.+++++.|.+ +.. ..+|+++.++++.|..+ .++++| +
T Consensus 127 ~~n~~~vp~~~~~~~~yiR~~v~~~~~~~G~~p~~--~~~~~i~~~P~~~~~~~g~~~v~l~~~~~~R~~p~~~~~~K~~ 204 (358)
T 3uzo_A 127 RANEHFLPPYGTGGSLYLRPFVIGVGDNIGVRTAP--EFIFSVFCVPVGPYFKGGLTPTNFITSDYDRAAPHGTGAAKVG 204 (358)
T ss_dssp HHTGGGSCCTTSCCEEEEEEEEEEESSCCSSSCCS--EEEEEEEEEEECCSSCSSSCCEEEECCSCCSSCTTSSTTSCBH
T ss_pred HHcCCcCCCCCCCceEEEEEEEEecCCccccCCCC--CeEEEEEEecChhhhhcCCccEEEEEEeeeccCCCccccccch
Confidence 98864 3579999999988878877643 456666665543 211 23578888888777543 568899 6
Q ss_pred cCChhHHHHHHHHHHcCCCEEEEEcCC--CcEEecCCceEEEEEeCCE-EEcCCCCCccccHHHHHHHHHhhh-hhhCCC
Q 019488 190 VNYLPNVLAKMEAEDKGASASIWIDED--GYVAEGPNVNVAFITHDKE-LVLPFFDKILSGCTAKRLLELAPK-LVEQGR 265 (340)
Q Consensus 190 ~nyl~~~la~~eA~~~G~de~Llld~~--G~V~E~s~sNi~fv~k~~~-l~TP~l~~iL~GItR~~ll~la~~-~~~~G~ 265 (340)
+||+.+++++++|+++|+||+||+|.+ |+|+|++++||||+.+||+ |+||+.++||+||||+.||++|++ + |+
T Consensus 205 ~NYl~~vla~~eA~~~G~~e~l~ld~~~~g~V~E~~~sNif~v~~dg~~l~TP~~~~iL~GItR~~vl~la~~~~---g~ 281 (358)
T 3uzo_A 205 GNYAASLLPGYEAKKRDFADVIYLDPATHTTIEEAGAANFFAITQDGQKFVTPQSPSILPSITKYSLLWLAEHRL---GL 281 (358)
T ss_dssp HHHHHHHHHHHHHHHTTCSEECCBCTTTSCBBCBCSSSEEEEEETTSCEEEEECCTTSCCCHHHHHHHHHHHHTT---CC
T ss_pred hhhHHHHHHHHHHHHcCCCEEEEEeCCCCCeEEEcCCeeEEEEECCCeEEEECCcCCcccCHHHHHHHHHHHhhc---CC
Confidence 999999999999999999999999985 9999999999955546788 999993379999999999999999 8 98
Q ss_pred cceEEEEeeCHHHHhccceeeeecCccCeEEEEEECCe----ecCC-CCchHHHHHHHHHHHHHhhcCCCC
Q 019488 266 LKSVKTANLTVDEAKGAAEMMYVGSTLPLLAITVWDEQ----PIGD-GNVGELTMALSDLLWEDMVAGPET 331 (340)
Q Consensus 266 ~~~v~E~~i~~~dL~~adEvfltnS~~gI~pV~~id~~----~~~~-g~~gp~t~~L~~~~~~~i~~~~~~ 331 (340)
+|+|+.++++||.+|||+|+|||++||+||.+||++ .++. +++||+|++|++.|. +||.|...
T Consensus 282 --~v~e~~i~~~eL~~adEvf~t~t~~~i~PV~~Id~~~~~~~i~~~~~~Gpvt~~L~~~~~-~iq~g~~~ 349 (358)
T 3uzo_A 282 --EVEEGDIRIDELGKFSEAGACGTAAVITPIGGIQHGDDFHVFYSESEPGPVTRRLYDELV-GIQYGDKE 349 (358)
T ss_dssp --EEEEECCBTTCGGGEEEEEEECTTTSSEEEEEEEETTEEEESSCSSSCCHHHHHHHHHHH-HHHTTSSC
T ss_pred --eEEEEECCHHHHHhhcceeEEcCcceEEEEEEECcccceeEeCCCCCcCHHHHHHHHHHH-HHHcCCCC
Confidence 999999999999999999999999999999999987 6754 369999999999998 89999763
No 11
>3dth_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP OBZ; 1.85A {Mycobacterium smegmatis} PDB: 3dtf_A* 3dtg_A* 3jz6_A* 3ht5_A*
Probab=100.00 E-value=2e-57 Score=439.26 Aligned_cols=280 Identities=23% Similarity=0.314 Sum_probs=244.4
Q ss_pred ceeCCEEeCCCcceeccCCcccccccceeeeeeee---CCe--ecCHHhHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Q 019488 47 SIFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIIL---NGY--LYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLT 121 (340)
Q Consensus 47 ~~~nG~~~~~~~~~i~~~drg~~yG~gvFEtlrv~---~G~--~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~li 121 (340)
.|.||++++.+.+.|++.||+|+||||||||||++ +|+ +|++++|++||.+||+.|+|+ +++.++|.++|.+++
T Consensus 53 ~W~~g~i~p~~~~~i~~~d~gl~yGdgvFEglkay~~~dG~i~lFrl~~H~~RL~~Sa~~L~mp-~~~~e~l~~~i~~lv 131 (372)
T 3dth_A 53 GWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSSARRLAIP-ELPEEVFIESLRQLI 131 (372)
T ss_dssp EEEEEEEEESCCEEECTTCTHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCC-CCCHHHHHHHHHHHH
T ss_pred eEECCcEeehHhcccCccccHhhcCcEEEEEEEEEECCCCcEeecCHHHHHHHHHHHHHHhCCC-CCCHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999 676 799999999999999999997 789999999999999
Q ss_pred HHcCC--------CCceEEEEEecCCCCCccCCCCCCCceEEEEEEcCCC-Cc-CCCCcEEEEee-eecC-CCCCCCccc
Q 019488 122 AASQC--------KKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDF-SQ-CKEGVKVITSS-IPMK-PRLFATVKN 189 (340)
Q Consensus 122 ~~~~~--------~~~~lRi~vt~G~g~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~gv~l~~~~-~~~~-~~~~~~~Kt 189 (340)
+.|+. ...|||++++++.+.+++.|.. .+.+++++.|.+. .. ..+|+++.+++ +.|. +..++.+|+
T Consensus 132 ~~n~~~vp~~~~~~~lYiRp~~~~~~~~~G~~p~~--~~~~~i~~~p~~~y~~~g~~~v~l~v~~~~~R~~p~g~~~~K~ 209 (372)
T 3dth_A 132 AVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSN--EYRYLLIASPAGAYFKGGIKPVSVWLSHEYVRASPGGTGAAKF 209 (372)
T ss_dssp HHHGGGSCCSSSSCEEEEEEEEEECCCCSSCSCCS--EEEEEEEEEEESCSSSCSSSCEEEEECSSCCSCCTTSSTTSCC
T ss_pred HhccccCCCCCCCCcEEEEEEEEcCCCcCCcCCCC--CeEEEEEEeeCchhhccCCccEEEEEccceeccCCCcccchhh
Confidence 98852 3469999999887777877653 5677777765432 21 23688888774 5564 446789997
Q ss_pred -cCChhHHHHHHHHHHcCCCEEEEEcC--CCcEEecCCceEEEEEeCC----EEEcCCCC-CccccHHHHHHHHHhhhhh
Q 019488 190 -VNYLPNVLAKMEAEDKGASASIWIDE--DGYVAEGPNVNVAFITHDK----ELVLPFFD-KILSGCTAKRLLELAPKLV 261 (340)
Q Consensus 190 -~nyl~~~la~~eA~~~G~de~Llld~--~G~V~E~s~sNi~fv~k~~----~l~TP~l~-~iL~GItR~~ll~la~~~~ 261 (340)
+||+.+++|+++|+++||||+||+|. +|+|+|++++|| |+++++ +|+|||++ +|||||||+.||++|+++
T Consensus 210 ~gNY~~~~la~~eA~~~G~de~l~ld~~~~g~v~E~~~sNi-f~v~~~~~g~~l~TP~l~~~iL~GITR~~vl~la~~~- 287 (372)
T 3dth_A 210 GGNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGMNL-FFVFGSGGSARLVTPELSGSLLPGITRDSLLQLATDA- 287 (372)
T ss_dssp HHHHHTTHHHHHHHHHTTCSEEEEECTTTSCBEEEETTEEE-EEEESCGGGCEEEECCCCSSSCCCHHHHHHHHHHHHH-
T ss_pred HhhhHHHHHHHHHHHHcCCCEEEEEcCCCCCEEEEcCceeE-EEEECCCCceEEEECCCCCCcCHHHHHHHHHHHHHHC-
Confidence 79999999999999999999999998 999999999999 555777 99999986 799999999999999998
Q ss_pred hCCCcceEEEEeeCHHHHhcc------ceeeeecCccCeEEEEEECCe----ecCCCCchHHHHHHHHHHHHHhhcCCC-
Q 019488 262 EQGRLKSVKTANLTVDEAKGA------AEMMYVGSTLPLLAITVWDEQ----PIGDGNVGELTMALSDLLWEDMVAGPE- 330 (340)
Q Consensus 262 ~~G~~~~v~E~~i~~~dL~~a------dEvfltnS~~gI~pV~~id~~----~~~~g~~gp~t~~L~~~~~~~i~~~~~- 330 (340)
|+ +|+|+.++++||.+| ||+|+|||+.+|+||.+|+++ .+++|++||+|++|++.|. +||.|..
T Consensus 288 --G~--~v~Er~i~~~eL~~a~~~g~~dEvf~tgTa~~i~PV~~Id~~~~~~~i~~g~~Gpvt~~L~~~l~-~iq~g~~~ 362 (372)
T 3dth_A 288 --GF--AVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHVKHHDGEFTIADGQPGEITMALRDTLT-GIQRGTFA 362 (372)
T ss_dssp --TC--EEEECCCBHHHHHHHHHHTSEEEEEEEETTTEEEEEEEEEETTEEEECTTSSCCHHHHHHHHHHH-HHHHTSSC
T ss_pred --CC--eEEEEECCHHHHHhhhhcCCccEEEEecccceEEEEEEEccCCceEECCCCCcCHHHHHHHHHHH-HHHcCCCC
Confidence 98 999999999999998 999999999999999999875 7788889999999999998 8999977
Q ss_pred ---Ccceec
Q 019488 331 ---TQRHCV 336 (340)
Q Consensus 331 ---~~~~~~ 336 (340)
.|.++|
T Consensus 363 d~~~W~~~v 371 (372)
T 3dth_A 363 DTHGWMARL 371 (372)
T ss_dssp CTTCCEEEC
T ss_pred CCCCCeEEC
Confidence 455544
No 12
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A*
Probab=100.00 E-value=4.1e-57 Score=437.82 Aligned_cols=280 Identities=19% Similarity=0.194 Sum_probs=242.6
Q ss_pred ceeCCEEeCCCcceeccCCcccccccceeeeeeeeCC-----eecCHHhHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Q 019488 47 SIFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILNG-----YLYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLT 121 (340)
Q Consensus 47 ~~~nG~~~~~~~~~i~~~drg~~yG~gvFEtlrv~~G-----~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~li 121 (340)
.|+||++++.+.+.|++.||+|+||||||||||+++| ++|+|++|++||.+||+.|+|+ +++.++|.+++.+++
T Consensus 47 ~w~ng~~~p~~~~~i~~~d~~l~yG~gvFEt~r~y~g~dG~i~~f~l~~Hl~RL~~Sa~~l~~~-~~~~~~l~~~i~~lv 125 (365)
T 2a1h_A 47 GWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLP-SFDKLELLECIRRLI 125 (365)
T ss_dssp EECCCEEEESCCEEECTTBHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCC-CCCHHHHHHHHHHHH
T ss_pred eEECCEEeEcccceeCccchhhhcCceeEeEEEEEecCCCceeecCHHHHHHHHHHHHHHhCCC-CCCHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999855 7899999999999999999998 789999999999999
Q ss_pred HHcCC-------CCceEEEEEecCCCCCccCCCCCCCceEEEEEEcCCCCc---CCCCcEEEEeee-ecC-CCCCCCccc
Q 019488 122 AASQC-------KKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDFSQ---CKEGVKVITSSI-PMK-PRLFATVKN 189 (340)
Q Consensus 122 ~~~~~-------~~~~lRi~vt~G~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~gv~l~~~~~-~~~-~~~~~~~Kt 189 (340)
+.++. .+.+||++++++.+.+++.|. ..+++++++.|.+... ..+|+++.+++. .|. ++.++++|+
T Consensus 126 ~~~~~~~p~~~g~~~yiR~~~~~~~~~~g~~p~--~~~~~~i~~~p~~~~~~~g~~~~v~l~~~~~~~R~~~~~~~~~Kt 203 (365)
T 2a1h_A 126 EVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQP--RRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKL 203 (365)
T ss_dssp HHTGGGSCCSTTCEEEEEEEEEECCBCCSCSCC--SEEEEEEEEEEECCSSSSSSCCCEEEEECTTCCSCCTTSSTTSCB
T ss_pred HhccccCCCCCCceEEEEEEEEecCCccCCCCC--CCcEEEEEEEECccccccccccceEEEEccccccCCCCccchhch
Confidence 98752 246999999998777787665 3677777777654221 146799988863 453 456789997
Q ss_pred -cCChhHHHHHHHHHHcCCCEEEEE-cCCCcEEecCCceEEEEEe--CCE--EEcCCCC-CccccHHHHHHHHHhhh-hh
Q 019488 190 -VNYLPNVLAKMEAEDKGASASIWI-DEDGYVAEGPNVNVAFITH--DKE--LVLPFFD-KILSGCTAKRLLELAPK-LV 261 (340)
Q Consensus 190 -~nyl~~~la~~eA~~~G~de~Lll-d~~G~V~E~s~sNi~fv~k--~~~--l~TP~l~-~iL~GItR~~ll~la~~-~~ 261 (340)
+||+.+++++++|+++|+||+||+ |.+|+|+|++++||||+.+ ||+ |+|||++ +||+||||+.||++|++ +
T Consensus 204 ~~ny~~~~la~~eA~~~G~de~L~l~d~~G~V~E~~~sNif~v~~~~dg~~~l~TP~l~~~iL~GITR~~vl~la~~~~- 282 (365)
T 2a1h_A 204 GGNYGPTVLVQQEALKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDMAQTWG- 282 (365)
T ss_dssp GGGTTTHHHHHHHHHHTTCSEEEEEETTTTEEEEETTEEEEEEEECTTSCEEEEECCCSSSSCCCHHHHHHHHHHHHHT-
T ss_pred hhccHHHHHHHHHHHHcCCCeEEEEECCCCeEEEcCceEEEEEEecCCCcEEEEeCCCCCCccccHHHHHHHHHHHhcC-
Confidence 999999999999999999999999 8999999999999955534 665 9999996 79999999999999998 5
Q ss_pred hCCCcceEEEEeeCHHHHhcc------ceeeeecCccCeEEEEEEC--CeecC---CCCchHHHHHHHHHHHHHhhcCCC
Q 019488 262 EQGRLKSVKTANLTVDEAKGA------AEMMYVGSTLPLLAITVWD--EQPIG---DGNVGELTMALSDLLWEDMVAGPE 330 (340)
Q Consensus 262 ~~G~~~~v~E~~i~~~dL~~a------dEvfltnS~~gI~pV~~id--~~~~~---~g~~gp~t~~L~~~~~~~i~~~~~ 330 (340)
|+ +|+|+.++++||.+| ||+|+|||++||+||.+|+ ++.+. .|++||+|++|++.|. +|+.|..
T Consensus 283 --G~--~v~Er~i~~~eL~~A~~~g~~dEvf~tnt~~~i~PV~~i~~~~~~~~~~~~g~~g~vt~~L~~~~~-~~~~g~~ 357 (365)
T 2a1h_A 283 --EF--RVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHIPTMENGPELILRFQKELK-EIQYGIR 357 (365)
T ss_dssp --SS--EEEECCCBHHHHHHHHHTTCEEEEEEEETTTEEEEEEEEEETTEEEECTTGGGTTHHHHHHHHHHH-HHHTTSS
T ss_pred --CC--ceEEEeCCHHHHHHHHhcCCccEEEEcCCeeEEEEEEEEEeCCeEEeeCCCCCcCHHHHHHHHHHH-HHHcCCC
Confidence 87 999999999999999 9999999999999999999 88663 4578999999999997 7999965
Q ss_pred Ccceecc
Q 019488 331 TQRHCVS 337 (340)
Q Consensus 331 ~~~~~~~ 337 (340)
. |.|.
T Consensus 358 ~--~~W~ 362 (365)
T 2a1h_A 358 A--HEWM 362 (365)
T ss_dssp C--CTTE
T ss_pred C--CCCe
Confidence 3 5554
No 13
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A*
Probab=100.00 E-value=6.8e-57 Score=438.54 Aligned_cols=281 Identities=21% Similarity=0.211 Sum_probs=242.6
Q ss_pred ceeCCEEeCCCcceeccCCcccccccceeeeeeeeCC-----eecCHHhHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Q 019488 47 SIFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILNG-----YLYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLT 121 (340)
Q Consensus 47 ~~~nG~~~~~~~~~i~~~drg~~yG~gvFEtlrv~~G-----~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~li 121 (340)
.|+||++++.+.+.|++.|++|+||||+|||||+++| ++|+|++|++||.+||+.|+|+ +++.++|.+++.+++
T Consensus 67 ~w~ng~~~p~~~~~i~~~d~~l~yG~gvFEg~k~y~g~dg~i~~frld~H~~RL~~Sa~~l~~p-~~~~e~~~~~i~~lv 145 (386)
T 2coi_A 67 GWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLNMDRMYRSAVRATLP-VFDKEELLECIQQLV 145 (386)
T ss_dssp EECCCEEEECCCEEECTTCHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCC-CCCHHHHHHHHHHHH
T ss_pred EEECCEEeecccCccCcccchhhcCceeEEEEEEEeCCCCceeecCHHHHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHH
Confidence 4899999999999999999999999999999999998 8999999999999999999997 789999999999999
Q ss_pred HHcCC-------CCceEEEEEecCCCCCccCCCCCCCceEEEEEEcCCC-Cc--CCCCcEEEEeee-ecC-CCCCCCccc
Q 019488 122 AASQC-------KKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDF-SQ--CKEGVKVITSSI-PMK-PRLFATVKN 189 (340)
Q Consensus 122 ~~~~~-------~~~~lRi~vt~G~g~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~gv~l~~~~~-~~~-~~~~~~~Kt 189 (340)
+.++. ...+||++++++.+.+++.|+. .+.+++++.|.+. .. ..+|+++.+++. .|. +..++.+|+
T Consensus 146 ~~~~~~vp~~~g~~~yiR~~~~~~~~~~g~~p~~--~~~~~i~~~p~~~y~~~~~~~~v~l~~~~~~~r~~p~~~g~~K~ 223 (386)
T 2coi_A 146 KLDQEWVPYSTSASLYIRPTFIGTEPSLGVKKPT--KALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKM 223 (386)
T ss_dssp HHTGGGSCSSSSCEEEEEEEEEECCCSCSCSCCS--EEEEEEEEEEECCCC-----CCEEEEECTTCCSCCTTSSTTSCC
T ss_pred HhccccCCCCCCccEEEEEEEEecCCccccCCCC--CcEEEEEEEECcccccccccccEEEEEcccccccCCCccccccc
Confidence 98752 3469999999876667777653 6777777776432 21 146899988864 343 345678996
Q ss_pred -cCChhHHHHHHHHHHcCCCEEEEEc-CCCcEEecCCceEEEEE--eCC--EEEcCCCC-CccccHHHHHHHHHhhh-hh
Q 019488 190 -VNYLPNVLAKMEAEDKGASASIWID-EDGYVAEGPNVNVAFIT--HDK--ELVLPFFD-KILSGCTAKRLLELAPK-LV 261 (340)
Q Consensus 190 -~nyl~~~la~~eA~~~G~de~Llld-~~G~V~E~s~sNi~fv~--k~~--~l~TP~l~-~iL~GItR~~ll~la~~-~~ 261 (340)
+||+.+++++++|+++||||+||+| .+|+|+|++++||||+. +|| +|+|||++ +||+||||+.||++|++ +
T Consensus 224 ~~Ny~~~~la~~eA~~~G~de~L~ld~~~g~V~E~~~sNiF~v~~~~~g~~~l~TP~l~~~iL~GITR~~vl~la~~~~- 302 (386)
T 2coi_A 224 GGNYGSSLFAQCEAVDNGCQQVLWLYGEDHQITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRRCILDLAHQWG- 302 (386)
T ss_dssp THHHHTTHHHHHHHHTTTCSEEEEEETTTTEEEEETTEEEEEEEECTTSCEEEEECCCSSSSCCCHHHHHHHHHHHHHC-
T ss_pred ccChHHHHHHHHHHHHcCCCEEEEEECCCCEEEEeCCceEEEEEEcCCCCEEEEECCCCCCccHHHHHHHHHHHHHhcc-
Confidence 8999999999999999999999999 79999999999995553 388 99999996 79999999999999998 6
Q ss_pred hCCCcceEEEEeeCHHHHhcc------ceeeeecCccCeEEEEEEC--CeecC---CCCchHHHHHHHHHHHHHhhcCCC
Q 019488 262 EQGRLKSVKTANLTVDEAKGA------AEMMYVGSTLPLLAITVWD--EQPIG---DGNVGELTMALSDLLWEDMVAGPE 330 (340)
Q Consensus 262 ~~G~~~~v~E~~i~~~dL~~a------dEvfltnS~~gI~pV~~id--~~~~~---~g~~gp~t~~L~~~~~~~i~~~~~ 330 (340)
|+ +|+|+.++++||.+| ||+|+|||+++|+||.+|+ ++.++ .|++||+|++|++.|. +||.|..
T Consensus 303 --G~--~V~Er~i~~~eL~~A~~~g~~dEvF~tgTa~~i~PV~~I~~~~~~~~~~~~g~~g~vt~~L~~~l~-~iq~g~~ 377 (386)
T 2coi_A 303 --EF--KVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETIHIPTMENGPKLASRILSKLT-DIQYGRE 377 (386)
T ss_dssp --SS--EEEECCCBHHHHHHHHTTTCEEEEEEEETTTEEEEEEEEEESSSEEECGGGGGTTHHHHHHHHHHH-HHHTTSS
T ss_pred --CC--cEEEEECCHHHHHHHHhcCCccEEEEecceeEEEEEEEEeeCCeEEecCCCCCcCHHHHHHHHHHH-HHhCCCC
Confidence 88 999999999999999 9999999999999999999 88886 4568999999999998 7999965
Q ss_pred --Ccceec
Q 019488 331 --TQRHCV 336 (340)
Q Consensus 331 --~~~~~~ 336 (340)
.|.++|
T Consensus 378 ~~~W~~~v 385 (386)
T 2coi_A 378 ERDWTIVL 385 (386)
T ss_dssp CCTTEEEC
T ss_pred CCCCeEeC
Confidence 344443
No 14
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8}
Probab=100.00 E-value=3.3e-56 Score=418.31 Aligned_cols=259 Identities=20% Similarity=0.201 Sum_probs=230.8
Q ss_pred eeCCEEeCCCcceeccCCcccccccceeeeeeeeCCeecCHHhHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHcCCC
Q 019488 48 IFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILNGYLYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLTAASQCK 127 (340)
Q Consensus 48 ~~nG~~~~~~~~~i~~~drg~~yG~gvFEtlrv~~G~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~li~~~~~~ 127 (340)
|.+|+++++..+.+++.|||| |||+|||||+++|++|+|++|++||.+||+.|+|+.|++.+++.+.+.++++.++ .
T Consensus 18 ~~~~~~~~~~~~~i~~~d~g~--G~gvFEtir~~~G~~~~l~~Hl~RL~~Sa~~l~~~~p~~~~~l~~~i~~~~~~~~-~ 94 (285)
T 3csw_A 18 RGKFRRADEISLDFSLFEKSL--QGAVYETLRTYSRAPFAAYKHYTRLKRSADFFNLPLSLSFDEFTKVLKAGADEFK-Q 94 (285)
T ss_dssp TTEEEESSEEEEEHHHHHHHT--TCCEEEEEEEETTEETTHHHHHHHHHHHHHTTTCCCSSCHHHHHHHHHHHHTTCS-S
T ss_pred ccCceEcccccCEeCCccccc--ceeeEEEEEEECCEECCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhC-C
Confidence 689999999999999999999 9999999999999999999999999999999999888999999999999998876 6
Q ss_pred CceEEEEEecCCCCCccCCCCCCCceEEEEEEcCCCCcCCCCcEEEEeeeecCCC--CCCCccccCChhHHHHHHHHHHc
Q 019488 128 KGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDFSQCKEGVKVITSSIPMKPR--LFATVKNVNYLPNVLAKMEAEDK 205 (340)
Q Consensus 128 ~~~lRi~vt~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~l~~~~~~~~~~--~~~~~Kt~nyl~~~la~~eA~~~ 205 (340)
+++||+++.. .++ ++++.+.|.+.....+|+++.+++.++.++ .++++|++||+++++++++|++
T Consensus 95 ~~~iR~~v~~---------~~~---~~~i~~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Kt~~~l~~~la~~~A~~- 161 (285)
T 3csw_A 95 EVRIKVYLFP---------DSG---EVLFVFSPLNIPDLETGVEVKISNVRRIPDLSTPPALKITGRTDIVLARREIVD- 161 (285)
T ss_dssp CEEEEEEECT---------TTC---CEEEEEEECCCCCCTTCEEEEECSSCCCCTTTSCTTCCBTTCHHHHHHHTTCSS-
T ss_pred CeEEEEEEEc---------CCC---EEEEEEEeCCCccccCCeEEEEEeEEecCCCCCCCccchhccHHHHHHHHHHHh-
Confidence 7899999932 111 455556555433346799999888776543 3469999999999999999877
Q ss_pred CCCEEEEEcCCCcEEecCCceEEEEEeCCEEEcCCCC-CccccHHHHHHHHHhhhhhhCCCcceEEEEeeCHHHHhccce
Q 019488 206 GASASIWIDEDGYVAEGPNVNVAFITHDKELVLPFFD-KILSGCTAKRLLELAPKLVEQGRLKSVKTANLTVDEAKGAAE 284 (340)
Q Consensus 206 G~de~Llld~~G~V~E~s~sNi~fv~k~~~l~TP~l~-~iL~GItR~~ll~la~~~~~~G~~~~v~E~~i~~~dL~~adE 284 (340)
+||+||+|.+|+|+||+++|| |+++||+|+|||++ ++|+||||+.|+++|+++ |+ +|+|++++++||.+|||
T Consensus 162 -~de~L~ld~~G~V~Egs~sNi-f~v~~g~l~TP~l~~~iL~GitR~~ll~~a~~~---g~--~v~E~~i~~~dL~~ade 234 (285)
T 3csw_A 162 -CYDVILLGLNGQVCEGSFSNV-FLVKEGKLITPSLDSGILDGITRENVIKLAKSL---EI--PVEERVVWVWELFEADE 234 (285)
T ss_dssp -SSEEEEECTTSBEEEESSSEE-EEEETTEEEEECGGGTCCCCHHHHHHHHHHHHT---TC--CEEEECCBHHHHHTCSE
T ss_pred -CCeEEEECCCCcEEEcCceEE-EEEECCEEEeCCCCCCccCCHHHHHHHHHHHHC---CC--eEEEEeCCHHHHhhCCE
Confidence 999999999999999999999 56699999999986 899999999999999998 98 99999999999999999
Q ss_pred eeeecCccCeEEEEEECCeecCCCCchHHHHHHHHHHHHHhhcCCC
Q 019488 285 MMYVGSTLPLLAITVWDEQPIGDGNVGELTMALSDLLWEDMVAGPE 330 (340)
Q Consensus 285 vfltnS~~gI~pV~~id~~~~~~g~~gp~t~~L~~~~~~~i~~~~~ 330 (340)
+|+|||++||+||.+||++.++.|++||++++|+++|. +++.|..
T Consensus 235 vfltns~~gv~PV~~id~~~~~~g~~g~~t~~L~~~~~-~~~~~~~ 279 (285)
T 3csw_A 235 MFLTHTSAGVVPVRRLNEHSFFEEEPGPVTATLMENFE-PFVLNLE 279 (285)
T ss_dssp EEEEETTTEEEEEEEETTEESCSSSCCHHHHHHHHHHH-HHHHTCG
T ss_pred EEEecCcceEEEEEEECCEECCCCCCCHHHHHHHHHHH-HHHhCcC
Confidence 99999999999999999999998889999999999998 5777643
No 15
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A*
Probab=100.00 E-value=8.9e-55 Score=422.14 Aligned_cols=280 Identities=23% Similarity=0.318 Sum_probs=234.1
Q ss_pred eeCCEEeCCCcceeccCCcccccccceeeeeeee---CCe--ecCHHhHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Q 019488 48 IFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIIL---NGY--LYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLTA 122 (340)
Q Consensus 48 ~~nG~~~~~~~~~i~~~drg~~yG~gvFEtlrv~---~G~--~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~li~ 122 (340)
|.||++++.+.+.|++.|++|||||||||+||+| ||+ +|++++|++||.+||+.|.|| .++.+.+.+++.+++.
T Consensus 54 W~ng~ivp~~~~~i~p~~~~lhYG~gvFEgiraY~~~dG~i~~Fr~~~h~~Rl~~Sa~~l~iP-~~~~e~~~~~~~~l~~ 132 (372)
T 3dtg_A 54 WHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSSARRLAIP-ELPEEVFIESLRQLIA 132 (372)
T ss_dssp EEEEEEEESCCEEECTTCTHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCC-CCCHHHHHHHHHHHHH
T ss_pred EeCCEEEEchhceeCcchhhhhccceeeeeEEEEECCCCeEEeeCchHHHHHHhhcccccCCC-CCCHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999998 675 589999999999999999996 4588888999888887
Q ss_pred HcC--------CCCceEEEEEecCCCCCccCCCCCCCceEEEEEEcCC-CCc-CCCCcEEEEe-eeecCCC-CCCCcc-c
Q 019488 123 ASQ--------CKKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDD-FSQ-CKEGVKVITS-SIPMKPR-LFATVK-N 189 (340)
Q Consensus 123 ~~~--------~~~~~lRi~vt~G~g~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~gv~l~~~-~~~~~~~-~~~~~K-t 189 (340)
.+. ..+.|||+.++++.+.+++.|.. .+.+++++.|.. +.. ..+...+.++ +..|..+ .....| +
T Consensus 133 ~~~~~v~~~~~~~~~YiRp~~~~~~~~lgv~p~~--~~~~~ii~~p~~~~~~~~~~~~~~~~~~~~~R~~p~~~~~~K~~ 210 (372)
T 3dtg_A 133 VDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSN--EYRYLLIASPAGAYFKGGIKPVSVWLSHEYVRASPGGTGAAKFG 210 (372)
T ss_dssp HHGGGSCCSSSSCEEEEEEEEEECCCCCSCSCCS--EEEEEEEEEEESCSSTTSSSCEEEEECSSCCSCCTTSSTTSCCH
T ss_pred HhhhhccccCCCCceEEEEEEEeecCccCcCCCC--CceeeeEecccccccccCcccceeecccceeecCcCCcchHHhc
Confidence 542 24579999999998888887653 455665655432 221 1233333333 4445433 344455 7
Q ss_pred cCChhHHHHHHHHHHcCCCEEEEEc--CCCcEEecCCceEEEEE---eCCEEEcCCCC-CccccHHHHHHHHHhhhhhhC
Q 019488 190 VNYLPNVLAKMEAEDKGASASIWID--EDGYVAEGPNVNVAFIT---HDKELVLPFFD-KILSGCTAKRLLELAPKLVEQ 263 (340)
Q Consensus 190 ~nyl~~~la~~eA~~~G~de~Llld--~~G~V~E~s~sNi~fv~---k~~~l~TP~l~-~iL~GItR~~ll~la~~~~~~ 263 (340)
+||+.+++++++|+++||||+||+| .+|+|+|++++|||||. |||+++|||++ +||+||||+.||++|+++
T Consensus 211 gNY~~~~la~~eA~~~G~deal~Ld~~~~g~V~E~~~sNiF~V~~~~kdg~liTPpl~~~iL~GITR~sVi~LA~~~--- 287 (372)
T 3dtg_A 211 GNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFVFGSGGSARLVTPELSGSLLPGITRDSLLQLATDA--- 287 (372)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECTTTSCBEEEETTEEEEEEESCGGGCEEEECCCCSSSCCCHHHHHHHHHHHHH---
T ss_pred CCcchhhhHHHHHHhcCcchhhhhccccccceeecCceEEEEEEecCCCceEEeCCccccccccHHHHHHHHHHHHC---
Confidence 8999999999999999999999999 57889999999995554 67799999996 799999999999999999
Q ss_pred CCcceEEEEeeCHHHHhcc------ceeeeecCccCeEEEEEECCe----ecCCCCchHHHHHHHHHHHHHhhcCCC---
Q 019488 264 GRLKSVKTANLTVDEAKGA------AEMMYVGSTLPLLAITVWDEQ----PIGDGNVGELTMALSDLLWEDMVAGPE--- 330 (340)
Q Consensus 264 G~~~~v~E~~i~~~dL~~a------dEvfltnS~~gI~pV~~id~~----~~~~g~~gp~t~~L~~~~~~~i~~~~~--- 330 (340)
|+ +|+|+.++++||.+| ||+|+|||+.+|+||.+||++ .+++|++||+|++|++.|. +||.|..
T Consensus 288 Gi--~V~Er~it~~El~~A~~~~~~dEvF~tGTaa~I~PV~~Id~~~~~~~ig~G~~Gpvt~~L~~~~~-~iq~G~~~d~ 364 (372)
T 3dtg_A 288 GF--AVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHVKHHDGEFTIADGQPGEITMALRDTLT-GIQRGTFADT 364 (372)
T ss_dssp TC--EEEECCCBHHHHHHHHHHTSEEEEEEEETTTEEEEEEEEEETTEEEECTTSSCCHHHHHHHHHHH-HHHTTSSCCT
T ss_pred Cc--eEEEEeCCHHHHHHHhhcCCCcEEEECCCcceEEEEEEEecCCceEEcCCCCcCHHHHHHHHHHH-HHHCCCCCCC
Confidence 98 999999999999988 999999999999999999865 7899999999999999998 7999987
Q ss_pred -Ccceec
Q 019488 331 -TQRHCV 336 (340)
Q Consensus 331 -~~~~~~ 336 (340)
.|.++|
T Consensus 365 ~~W~~~v 371 (372)
T 3dtg_A 365 HGWMARL 371 (372)
T ss_dssp TCCEEEC
T ss_pred CCCcEeC
Confidence 455554
No 16
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus}
Probab=100.00 E-value=5.1e-53 Score=388.71 Aligned_cols=229 Identities=26% Similarity=0.285 Sum_probs=200.5
Q ss_pred ceeCCEEeCCCcceeccCCccccc-ccceeeeeeeeCCeecCHHhHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHc-
Q 019488 47 SIFGGIILDPAMMVIPIDDHMVHR-GHGVFDTAIILNGYLYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLTAAS- 124 (340)
Q Consensus 47 ~~~nG~~~~~~~~~i~~~drg~~y-G~gvFEtlrv~~G~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~li~~~- 124 (340)
+|+||+.. +++.||||+| |||+|||||+++|++|+|++|++||.+||+.|+|+.|++ +++.+.+.++++.+
T Consensus 2 ~~~nG~~~------~~~~d~g~~y~G~gvFEtir~~~G~~~~l~~Hl~RL~~Sa~~l~~~~p~~-~~l~~~i~~~~~~~~ 74 (246)
T 2zgi_A 2 RLLNGTPL------ALALPEAFLYHGASVFTTLRAEGGRPLWLEEHLARLRRHALALGLSYPGD-EAFLEDLEALLRAFP 74 (246)
T ss_dssp EEETTEEC------CCSSCHHHHHSCCCEEEEEEEETTEETTHHHHHHHHHHHHHHTTCCCCCH-HHHHHHHHHHTTSCT
T ss_pred EEECCccc------CCCccCcccccCeeEEEEEEEECCEeCCHHHHHHHHHHHHHHhCCCCCCH-HHHHHHHHHHHHhcC
Confidence 68899954 4899999999 999999999999999999999999999999999988878 99999999998876
Q ss_pred CCCCceEEEEEecCCCCCccCCCCCCCceEEEEEEcCCC-CcCCCCcEEEEeeeecCCCCCCCccccCChhHHHHHHHHH
Q 019488 125 QCKKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDF-SQCKEGVKVITSSIPMKPRLFATVKNVNYLPNVLAKMEAE 203 (340)
Q Consensus 125 ~~~~~~lRi~vt~G~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~gv~l~~~~~~~~~~~~~~~Kt~nyl~~~la~~eA~ 203 (340)
+..+++||+++++|.+.+++.|. +.+. ..+.+|+++.+++.+..++ ++++|++||+.+++++++|+
T Consensus 75 ~~~~~~vR~~v~~g~~~~~~~p~------------~~~~~~~~~~g~~l~~~~~r~~~~-~~~~Kt~n~~~~~~a~~~A~ 141 (246)
T 2zgi_A 75 KAPCLRLRFTVGEGVRLSEARPY------------APLPLSLYREGVRVRLTGYRVHPD-LARYKTGNYLPYRLALEEAR 141 (246)
T ss_dssp TCSEEEEEEEEETTEEEEEEEEC------------CCCCTHHHHHCBCEEEEEEECCTT-TTTSCBSCCHHHHHHHHHHH
T ss_pred CCCCEEEEEEEECCCCccCcCcC------------CCCchhHhhcCeEEEEecccCCCC-CccchhhhhHHHHHHHHHHH
Confidence 56789999999998554433211 1111 1124689999888733344 77999999999999999999
Q ss_pred HcCCCEEEEEcCCCcEEecCCceEEEEEeCCEEEcCCCCCccccHHHHHHHHHhhhhhhCCCcceEEEEeeCHHHHhccc
Q 019488 204 DKGASASIWIDEDGYVAEGPNVNVAFITHDKELVLPFFDKILSGCTAKRLLELAPKLVEQGRLKSVKTANLTVDEAKGAA 283 (340)
Q Consensus 204 ~~G~de~Llld~~G~V~E~s~sNi~fv~k~~~l~TP~l~~iL~GItR~~ll~la~~~~~~G~~~~v~E~~i~~~dL~~ad 283 (340)
++|+||+||+|.+|+|+|++++|| |+++||+|+|| .++|+||||+.|+++|+++ |+ +|+|++++++||.+
T Consensus 142 ~~g~de~l~ld~~G~v~Egs~sNi-f~v~~g~l~TP--~~iL~GitR~~ll~~a~~~---g~--~v~E~~i~~~dL~~-- 211 (246)
T 2zgi_A 142 KEGAFEGLLLDAFGHVVDGSRTSP-LLFREGTLYLL--EGGLEGITREKVAEAARGL---GL--RVERGLFRPEGLRG-- 211 (246)
T ss_dssp TTTCSEEEEECTTSCEEEESSSEE-EEEETTEEEEE--CSSCCCHHHHHHHHHHHHT---TC--EEEEECCCGGGCCS--
T ss_pred HcCCCEEEEECCCCCEEEcCCeEE-EEEECCEEECC--CCccCcHHHHHHHHHHHHC---CC--eEEEEeCCHHHHHh--
Confidence 999999999999999999999999 66699999999 8899999999999999998 87 99999999999999
Q ss_pred eeeeecCccCeEEEEEECCeec
Q 019488 284 EMMYVGSTLPLLAITVWDEQPI 305 (340)
Q Consensus 284 EvfltnS~~gI~pV~~id~~~~ 305 (340)
|+|+|||++||+||.+||++.+
T Consensus 212 evfltns~~gi~pV~~id~~~~ 233 (246)
T 2zgi_A 212 HLLLAGSGVGLLPVRPPPPELL 233 (246)
T ss_dssp EEEEEETTTEEEEBSSCCGGGH
T ss_pred hHeeecChhheEEEEEEChHHH
Confidence 9999999999999999998755
No 17
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti}
Probab=100.00 E-value=1.1e-45 Score=334.60 Aligned_cols=204 Identities=19% Similarity=0.174 Sum_probs=178.2
Q ss_pred ccccceeeeeeee-CCeecCHHhHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHcCCCCceEEEEEecCCCCCccCCC
Q 019488 69 HRGHGVFDTAIIL-NGYLYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLTAASQCKKGTLRFWLTAGPGDFLLSPA 147 (340)
Q Consensus 69 ~yG~gvFEtlrv~-~G~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~li~~~~~~~~~lRi~vt~G~g~~~~~~~ 147 (340)
.-|+|+|||||++ +|++|+|++|++||.+||+.|+|+ ++.+++.+.+.++++ ++..+++||+++++| |.
T Consensus 13 ~~g~glFEtir~~~~G~~~~l~~Hl~RL~~Sa~~l~~~--~~~~~l~~~i~~~~~-~~~~~~~iR~~~~~~-g~------ 82 (221)
T 3qqm_A 13 TADFELIETMRWQPGTSFLRFDRHLARLYGSAAELGFA--CDPQRIAEVLSDALD-GARTAMRTRLALARN-GD------ 82 (221)
T ss_dssp TSCCEEEEEEEEETTTEETTHHHHHHHHHHHHHHHTCC--CCHHHHHHHHHHHHT-TCCSCEEEEEEEETT-SC------
T ss_pred CCCCEEEEEEEEecCCcCcCHHHHHHHHHHHHHHcCCC--CCHHHHHHHHHHHHh-cCCCCEEEEEEEEcC-CC------
Confidence 3588999999999 999999999999999999999995 589999999999987 556678999999986 21
Q ss_pred CCCCceEEEEEEcCCCCcCCCCcEEEEeeeecC-CCCCCCccccCChhHHHHHHHHHHcCCCEEEEEcCCCcEEecCCce
Q 019488 148 GCPTSAFYAVVIDDDFSQCKEGVKVITSSIPMK-PRLFATVKNVNYLPNVLAKMEAEDKGASASIWIDEDGYVAEGPNVN 226 (340)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~gv~l~~~~~~~~-~~~~~~~Kt~nyl~~~la~~eA~~~G~de~Llld~~G~V~E~s~sN 226 (340)
+.+.+.|.+.....+|+++.+++.++. ++.++++|++||+.+++++++|+++|+||+||+|++|+|+|++++|
T Consensus 83 ------~~i~~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~Kt~nr~~~~~a~~~a~~~g~~e~l~l~~~g~v~E~s~sN 156 (221)
T 3qqm_A 83 ------ATASAQPYEPLAADKVWILRLARTRLDSQNTLLRHKTSRRQLYTHARSEYLVTQADEVLLANERGEICEGTITN 156 (221)
T ss_dssp ------EEEEEEECCCCCTTCCEEEEECSCCBCTTCGGGGSCBSCCHHHHHHHHTSCTTTCSEEEEEBTTSCEEEESSCE
T ss_pred ------EEEEEEcCCCCCCCCCEEEEEeeeEecCCCcchhchhcchHHHHHHHHHHHhcCCcEEEEECCCCeEEEcCcee
Confidence 333444444333357999999887764 4568899999999999999999999999999999999999999999
Q ss_pred EEEEEeC-CEEEcCCCC-CccccHHHHHHHHHhhhhhhCCCcceEEEEeeCHHHHhccceeeeecCccCeEEEEE
Q 019488 227 VAFITHD-KELVLPFFD-KILSGCTAKRLLELAPKLVEQGRLKSVKTANLTVDEAKGAAEMMYVGSTLPLLAITV 299 (340)
Q Consensus 227 i~fv~k~-~~l~TP~l~-~iL~GItR~~ll~la~~~~~~G~~~~v~E~~i~~~dL~~adEvfltnS~~gI~pV~~ 299 (340)
| |+++| |+|+|||++ ++|+||||+.|+++ + +|+|+.++++||.+|||+|+|||++||+||+-
T Consensus 157 i-f~~~~~~~l~TP~~~~~~L~GitR~~ll~~-------~---~v~e~~i~~~~L~~adevf~~ns~~gi~pV~l 220 (221)
T 3qqm_A 157 V-FADFGDGVLATPRLDCGLLPGVLRAELLDE-------G---RAEEAIYSYDDLKSAKALFVGNSLRGLIPAKL 220 (221)
T ss_dssp E-EEECSSSCEEEECGGGTCCCCHHHHHHHHT-------T---SEEEECCCHHHHTTCSEEEEEETTTEEEEEEE
T ss_pred E-EEEeCCCEEECCCCccCcchHHHHHHHHhh-------C---cEEEEeCCHHHHHhCCEEEEEecceeEEEEEE
Confidence 9 55687 999999986 79999999999974 3 69999999999999999999999999999974
No 18
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus}
Probab=100.00 E-value=1.4e-42 Score=308.20 Aligned_cols=189 Identities=14% Similarity=0.175 Sum_probs=159.0
Q ss_pred ccccceeeeeeeeCCeecCHHhHHHHHHHHH-HHcCCC--CCCCHHHHHHHHHHHHHHcCCCCceEEEEEecCCCCCccC
Q 019488 69 HRGHGVFDTAIILNGYLYELDVHLDRFLRSA-VSARIS--SPFPRSTLRSILVQLTAASQCKKGTLRFWLTAGPGDFLLS 145 (340)
Q Consensus 69 ~yG~gvFEtlrv~~G~~~~l~~Hl~RL~~Sa-~~l~i~--~p~~~~~l~~~i~~li~~~~~~~~~lRi~vt~G~g~~~~~ 145 (340)
+||+|+|||||+++|++|+|++|++||.+|| +.|+|+ .|++.+++.+.+. ++++++..+++||+++++|. ..+.
T Consensus 2 ~~g~~vfEt~r~~~g~~~~l~~Hl~RL~~Sa~~~l~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~iR~~~~~g~--~~~~ 78 (194)
T 3ceb_A 2 MWQFPLFETILIEQGQAKNISYHQQRYEKSLLKFYPKMKLQPFDLAKIIAKHT-ALFTHREGLIRCRIDYNHHD--YVLQ 78 (194)
T ss_dssp CTTCCEEEEEEEETTEECSHHHHHHHHHHHHHHHSTTCCCCCCCHHHHHHTCG-GGGSCSSSEEEEEEEECSSC--EEEE
T ss_pred CCCCeEEEEEEEECCEecCHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-HHhhCCCCCEEEEEEEeCCc--cEEE
Confidence 6999999999999999999999999999999 999998 6799999999988 88777767789999999872 1111
Q ss_pred CCCCCCceEEEEEEcCCCCcCCCCcEEEEeeeec-CCCCCCCccccCChhHHHHHHHHHHcCCCEEEEEcCCCcEEecCC
Q 019488 146 PAGCPTSAFYAVVIDDDFSQCKEGVKVITSSIPM-KPRLFATVKNVNYLPNVLAKMEAEDKGASASIWIDEDGYVAEGPN 224 (340)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~gv~l~~~~~~~-~~~~~~~~Kt~nyl~~~la~~eA~~~G~de~Llld~~G~V~E~s~ 224 (340)
..|.+ + .++ .+..+. .++.++++|++||+ ++++++|+++|+||+||+ ++|+|+|+++
T Consensus 79 ------------~~p~~--~--~~~---~~~~~~~~~~~~~~~Kt~n~~--~~~~~~A~~~g~de~l~l-~~G~v~E~s~ 136 (194)
T 3ceb_A 79 ------------CFPYQ--Q--KVY---RTFKPVFCDHIDYSLKFSDRT--LLNNLLKQKEECDEIMII-RQGKVTDCSI 136 (194)
T ss_dssp ------------EEEEC--C--CCC---CCEEEEECSSCCCSSCBSCCH--HHHHHHGGGTTSSEEEEE-ETTEECCCSS
T ss_pred ------------EecCC--C--CcE---EEEEEecCCCcchhhcccCHH--HHHHHHHhhCCCCEEEEE-eCCEEEEecc
Confidence 11111 1 122 111111 24467899999998 778899999999999999 9999999999
Q ss_pred ceEEEEEeCCEEEcCCCCCccccHHHHHHHHHhhhhhhCCCcceEEEEeeCHHHHhccceeeeecCccCe
Q 019488 225 VNVAFITHDKELVLPFFDKILSGCTAKRLLELAPKLVEQGRLKSVKTANLTVDEAKGAAEMMYVGSTLPL 294 (340)
Q Consensus 225 sNi~fv~k~~~l~TP~l~~iL~GItR~~ll~la~~~~~~G~~~~v~E~~i~~~dL~~adEvfltnS~~gI 294 (340)
+|| |+++||+|+||| .++|+||||+.|++ ++ +|+|++++++||.+|||+|+|||++||
T Consensus 137 sNi-f~~~~g~l~TP~-~~~L~GitR~~ll~--------~~--~v~e~~i~~~eL~~adevfl~ns~~gi 194 (194)
T 3ceb_A 137 GNL-IFRQNNQWITPD-KPLLEGTQRAKLLE--------QK--KIIAREIFFEDLAQYEEIRLINAMNGL 194 (194)
T ss_dssp SEE-EEEETTEEEEES-SCSSCCHHHHHHHH--------TT--SSEEECCBGGGGGGCSCEEEEBTTBCC
T ss_pred EEE-EEEECCEEECCC-CCCcChHHHHHHHc--------CC--CEEEecCCHHHHhhccEEEEEecccCC
Confidence 999 666999999999 89999999999997 33 899999999999999999999999986
No 19
>2r48_A Phosphotransferase system (PTS) mannose-specific iibca component; PTS system, fructose specific IIB PFAM02379, PSI-2, MCSG; 1.80A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=29.92 E-value=52 Score=25.24 Aligned_cols=77 Identities=17% Similarity=0.151 Sum_probs=44.8
Q ss_pred CCccccHHHHH-HHHHhhhhhhCCCcceEE-------EEeeCHHHHhccceeeeecCccCeEEEEEECCeecCCCCchHH
Q 019488 242 DKILSGCTAKR-LLELAPKLVEQGRLKSVK-------TANLTVDEAKGAAEMMYVGSTLPLLAITVWDEQPIGDGNVGEL 313 (340)
Q Consensus 242 ~~iL~GItR~~-ll~la~~~~~~G~~~~v~-------E~~i~~~dL~~adEvfltnS~~gI~pV~~id~~~~~~g~~gp~ 313 (340)
.|+-...+-.- |-+.|+++ |+.+.|+ |-.++.+|+.+||-+++.+.. .+- -.+++|+++-...+...
T Consensus 13 tGiAhTymAaeaL~~aA~~~---G~~ikVEtqGs~G~~n~Lt~~~I~~Ad~VIiA~d~-~v~-~~RF~GK~v~~~~v~~a 87 (106)
T 2r48_A 13 NGIAHTYMAAENLQKAADRL---GVSIKVETQGGIGVENKLTEEEIREADAIIIAADR-SVN-KDRFIGKKLLSVGVQDG 87 (106)
T ss_dssp SCSHHHHHHHHHHHHHHHHH---TCEEEEEEEETTEEESCCCHHHHHHCSEEEEEESS-CCC-CGGGTTSBEEEECHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHC---CCeEEEEecCCCCccCCCCHHHHHhCCEEEEEeCC-ccC-HhHcCCCeEEEeCHHHH
Confidence 35444444333 44466777 8844443 235999999999999888873 333 45666765433234444
Q ss_pred HHHHHHHHHH
Q 019488 314 TMALSDLLWE 323 (340)
Q Consensus 314 t~~L~~~~~~ 323 (340)
.+.=...+.+
T Consensus 88 i~~p~~~l~~ 97 (106)
T 2r48_A 88 IRKPEELIQK 97 (106)
T ss_dssp HHCHHHHHHH
T ss_pred HHCHHHHHHH
Confidence 4444444443
No 20
>2r4q_A Phosphotransferase system (PTS) fructose-specific iiabc component; fructose specific IIB subunit, PF structural genomics, PSI-2; HET: MSE; 1.60A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=28.75 E-value=54 Score=25.14 Aligned_cols=82 Identities=18% Similarity=0.127 Sum_probs=46.8
Q ss_pred EcCCCCCccccHHHHH-HHHHhhhhhhCCCcceEE-------EEeeCHHHHhccceeeeecCccCeEEEEEECCeecCCC
Q 019488 237 VLPFFDKILSGCTAKR-LLELAPKLVEQGRLKSVK-------TANLTVDEAKGAAEMMYVGSTLPLLAITVWDEQPIGDG 308 (340)
Q Consensus 237 ~TP~l~~iL~GItR~~-ll~la~~~~~~G~~~~v~-------E~~i~~~dL~~adEvfltnS~~gI~pV~~id~~~~~~g 308 (340)
+|....|+-...+-.- |-+.|+++ |+.+.|+ |-.++.+|+.+||-+++.+.. .+- -.+++|+++-..
T Consensus 8 VTaCptGiAhTymAaeaL~~aA~~~---G~~ikVEtqGs~G~~n~Lt~~~I~~Ad~VIiA~d~-~v~-~~RF~GK~v~~~ 82 (106)
T 2r4q_A 8 VTACPTGIAHTFMAADALKEKAKEL---GVEIKVETNGSSGIKHKLTAQEIEDAPAIIVAADK-QVE-MERFKGKRVLQV 82 (106)
T ss_dssp EEECSCC--CHHHHHHHHHHHHHHH---TCCEEEEEEETTEEESCCCHHHHHHCSCEEEEESS-CCC-CGGGTTSBEEEE
T ss_pred EecCCCcHHHHHHHHHHHHHHHHHC---CCeEEEEecCCCCccCCCCHHHHHhCCEEEEEeCC-ccC-HhHcCCCeEEEe
Confidence 3433245555555444 44467777 8844454 335999999999999888873 333 456667655332
Q ss_pred CchHHHHHHHHHHHH
Q 019488 309 NVGELTMALSDLLWE 323 (340)
Q Consensus 309 ~~gp~t~~L~~~~~~ 323 (340)
.+....+.=...+.+
T Consensus 83 ~v~~ai~~p~~~l~~ 97 (106)
T 2r4q_A 83 PVTAGIRRPQELIEK 97 (106)
T ss_dssp CHHHHHHCHHHHHHH
T ss_pred CHHHHHHCHHHHHHH
Confidence 344444444444543
No 21
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=21.07 E-value=2e+02 Score=21.55 Aligned_cols=44 Identities=16% Similarity=0.256 Sum_probs=30.9
Q ss_pred ccHHHHHHHHHhhhhhhCCCcceEEEEee---CHHHHhccceeeeecCc
Q 019488 246 SGCTAKRLLELAPKLVEQGRLKSVKTANL---TVDEAKGAAEMMYVGST 291 (340)
Q Consensus 246 ~GItR~~ll~la~~~~~~G~~~~v~E~~i---~~~dL~~adEvfltnS~ 291 (340)
-|-|++..-.+++.+...|. +++--.+ ..+++.++|-+++.+.+
T Consensus 10 tGnT~~~a~~i~~~l~~~g~--~v~~~~~~~~~~~~l~~~d~vi~g~p~ 56 (137)
T 2fz5_A 10 TGNTEAMANEIEAAVKAAGA--DVESVRFEDTNVDDVASKDVILLGCPA 56 (137)
T ss_dssp SSHHHHHHHHHHHHHHHTTC--CEEEEETTSCCHHHHHTCSEEEEECCC
T ss_pred CChHHHHHHHHHHHHHhCCC--eEEEEEcccCCHHHHhcCCEEEEEccc
Confidence 48898887777776644475 6655444 36788899988877765
Done!