Citrus Sinensis ID: 019495
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 340 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FHD7 | 487 | Probable serine/threonine | no | no | 0.982 | 0.685 | 0.805 | 1e-165 | |
| Q944A7 | 512 | Probable serine/threonine | no | no | 0.976 | 0.648 | 0.644 | 1e-129 | |
| Q7XJT7 | 465 | Probable inactive recepto | no | no | 0.938 | 0.686 | 0.454 | 8e-81 | |
| Q8H186 | 389 | Probable receptor-like pr | no | no | 0.497 | 0.434 | 0.319 | 3e-20 | |
| O48814 | 395 | Serine/threonine-protein | no | no | 0.502 | 0.432 | 0.315 | 4e-19 | |
| Q9LFP7 | 493 | Probable receptor-like pr | no | no | 0.476 | 0.328 | 0.329 | 1e-18 | |
| Q06548 | 410 | Protein kinase APK1A, chl | no | no | 0.479 | 0.397 | 0.340 | 2e-18 | |
| P46573 | 412 | Protein kinase APK1B, chl | no | no | 0.491 | 0.405 | 0.338 | 6e-18 | |
| Q9SFT7 | 414 | Serine/threonine-protein | no | no | 0.461 | 0.379 | 0.331 | 6e-17 | |
| Q9SRH7 | 490 | Receptor-like serine/thre | no | no | 0.476 | 0.330 | 0.313 | 9e-17 |
| >sp|Q9FHD7|Y5126_ARATH Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 580 bits (1494), Expect = e-165, Method: Compositional matrix adjust.
Identities = 269/334 (80%), Positives = 300/334 (89%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
MKWAMRLRV LH+AQALEYCTSKGRALYHDLNAYR+LFD+D NPRLS FGLMKNSRDGKS
Sbjct: 152 MKWAMRLRVALHIAQALEYCTSKGRALYHDLNAYRVLFDDDANPRLSCFGLMKNSRDGKS 211
Query: 61 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120
YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN+QML DS
Sbjct: 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQMLMDS 271
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSA 180
LEGQF+ DDGTEL+RLASRCLQYEPRERPNPKSLV+A+ PLQK+ E+ SH L+G+P+SA
Sbjct: 272 GLEGQFSSDDGTELIRLASRCLQYEPRERPNPKSLVSAMIPLQKDLEIASHQLLGVPNSA 331
Query: 181 SVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDV 240
+ + LSPLGEAC R DLTAIHEI+EK+ YKDDEG ELSFQMWTDQMQ+TL KKKGD
Sbjct: 332 TTTALSPLGEACLRSDLTAIHEIIEKLGYKDDEGATTELSFQMWTDQMQDTLVFKKKGDS 391
Query: 241 AFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 300
AFR KD AIECY+QFI+ GTM SPTV+AR+SLCYLM+DMP++ALN+AMQAQ+ISP WH
Sbjct: 392 AFRHKDFAKAIECYSQFIEVGTMGSPTVHARQSLCYLMNDMPREALNNAMQAQVISPAWH 451
Query: 301 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 334
IASYLQA ALSA+G ENEA ALK+G LE+K+N
Sbjct: 452 IASYLQAVALSALGQENEAHTALKDGAMLESKRN 485
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q944A7|Y4523_ARATH Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 462 bits (1188), Expect = e-129, Method: Compositional matrix adjust.
Identities = 218/338 (64%), Positives = 269/338 (79%), Gaps = 6/338 (1%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
++WAMRLRV ++A+AL+YC+++GR LYHDLNAYR+LFDEDG+PRLS FGLMKNSRDGKS
Sbjct: 169 IEWAMRLRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKS 228
Query: 61 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120
YSTNLA+TPPEYLR GRVTPESV YSFGT+LLDLLSGKHIPPSHALD+IR +N+ +L DS
Sbjct: 229 YSTNLAYTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDS 288
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPH-- 178
LEG+F+ ++ T +V LAS+CLQYEPRERPN K LV L+PLQ +++VPS+V++GI
Sbjct: 289 HLEGKFSTEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQE 348
Query: 179 ---SASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSK 235
S PLSPLGEACSR DLTAIH+IL Y+DDEG NELSFQ WT QM++ L+++
Sbjct: 349 EAPSTPQRPLSPLGEACSRMDLTAIHQILVMTHYRDDEGT-NELSFQEWTQQMKDMLDAR 407
Query: 236 KKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII 295
K+GD +FR+KD K AI+CY+QFID GTMVSPTV+ RRSLCYL+ D P AL DAMQAQ +
Sbjct: 408 KRGDQSFREKDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCV 467
Query: 296 SPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 333
P W A Y+Q+ AL+ + M +A L E LE K+
Sbjct: 468 YPDWPTAFYMQSVALAKLNMNTDAADMLNEAAQLEEKR 505
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q7XJT7|SSP_ARATH Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1 | Back alignment and function description |
|---|
Score = 300 bits (769), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 153/337 (45%), Positives = 218/337 (64%), Gaps = 18/337 (5%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
M W++RLRV +A+AL+YC + G A Y++L+AY++LFDEDG+ LS FGLMK + +
Sbjct: 143 MDWSIRLRVAYFVAEALDYCNTAGFASYNNLSAYKVLFDEDGDACLSCFGLMKEINNDQ- 201
Query: 61 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120
+ TG V PE+VIY FGT+L++LLSGK IPPSHA ++I +N+ L D
Sbjct: 202 ------------ITTGSVNPENVIYRFGTVLVNLLSGKQIPPSHAPEMIHRKNVFKLMDP 249
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPH-- 178
L+G+F+ D+ + +LAS+CL+YE +E PN K +V L LQ TE PS+ ++ + +
Sbjct: 250 YLKGKFSIDEANVVYKLASQCLKYEGQESPNTKEIVATLETLQTRTEAPSYEVVEMTNQE 309
Query: 179 --SASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKK 236
++S S LSPLGEAC R DL +IH IL Y DD+ + ELSF+ W +++E + ++
Sbjct: 310 KDASSSSNLSPLGEACLRMDLASIHSILVLAGYDDDKDII-ELSFEEWIQEVKELQDVRR 368
Query: 237 KGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS 296
GD AF ++D K AI CY+QF++ ++V P+VYARRSL YL D P+ AL D M AQ +
Sbjct: 369 NGDRAFVEQDFKTAIACYSQFVEERSLVYPSVYARRSLSYLFCDEPEKALLDGMHAQGVF 428
Query: 297 PIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 333
P W A YLQ+ AL+ + M ++ LKE LE KK
Sbjct: 429 PDWPTAFYLQSVALAKLDMNTDSADTLKEAALLEVKK 465
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Probable inactive protein kinase that activates the YODA MAP kinase cascade, regulating the asymmetric first division, and thus embryo polarity. Acts as an adapter at the plasma membrane, possibly recruiting an activator. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8H186|Y3545_ARATH Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 25/194 (12%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 58
+ W +R++V L A+ L + S + +Y D+ A IL D D N +LS FGL +RDG
Sbjct: 167 LSWILRIKVALDAAKGLAFLHSDPVKVIYRDIKASNILLDSDFNAKLSDFGL---ARDGP 223
Query: 59 ---KSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHAL 106
+SY + + PEY+ TG + S +YSFG +LL+LL G+ H P+
Sbjct: 224 MGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQ 283
Query: 107 DLI--------RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 158
+L+ R + ++ D+ L Q+ + L +A +CL +EP+ RP +V A
Sbjct: 284 NLVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVVRA 343
Query: 159 LSPLQKETEVPSHV 172
L LQ P++V
Sbjct: 344 LVQLQDSVVKPANV 357
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O48814|BIK1_ARATH Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 96/190 (50%), Gaps = 19/190 (10%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 59
+ W +R+ V L A+ L + S + +Y D+ A IL D D N +LS FGL ++ G
Sbjct: 172 LPWFLRVNVALDAAKGLAFLHSDPVKVIYRDIKASNILLDADYNAKLSDFGLARDGPMGD 231
Query: 60 -SYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLI 109
SY + + PEY+ +G + S +YSFG LLL++LSGK H P+ +L+
Sbjct: 232 LSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGKRALDHNRPAKEENLV 291
Query: 110 --------RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 161
R + ++ D+ L+ Q+ ++ + +A +CL +EP+ RP +V AL
Sbjct: 292 DWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQCLSFEPKSRPTMDQVVRALQQ 351
Query: 162 LQKETEVPSH 171
LQ PS
Sbjct: 352 LQDNLGKPSQ 361
|
Required to activate the resistance responses to necrotrophic pathogens. Phosphorylates FLS2 and BAK1. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LFP7|Y5158_ARATH Probable receptor-like protein kinase At5g15080 OS=Arabidopsis thaliana GN=At5g15080 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 96/182 (52%), Gaps = 20/182 (10%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKG--RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD- 57
+ W++R+++ L A+ L + + +Y D IL D D N +LS FGL K++ D
Sbjct: 244 LPWSIRMKIALGAAKGLSFLHEEALKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPDE 303
Query: 58 GKSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG-----KHIPPS-HAL 106
GK++ + + PEY+ TG +T +S +YSFG +LL++L+G K+ P H L
Sbjct: 304 GKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 363
Query: 107 ------DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 160
L+ R L D LEG F+ ++ +LA++CL +P+ RP +V AL
Sbjct: 364 VEWARPHLLDKRRFYRLLDPRLEGHFSIKGAQKVTQLAAQCLSRDPKIRPKMSDVVEALK 423
Query: 161 PL 162
PL
Sbjct: 424 PL 425
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q06548|APK1A_ARATH Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 99/182 (54%), Gaps = 19/182 (10%)
Query: 1 MKWAMRLRVVLHLAQALEYC-TSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 58
+ W +RL+V L A+ L + +S+ R +Y D IL D + N +LS FGL K+ G
Sbjct: 173 LSWKLRLKVALGAAKGLAFLHSSETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGD 232
Query: 59 KSY-STNL----AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP----PSHALD-- 107
KS+ ST + + PEYL TG +T +S +YSFG +LL+LLSG+ PS +
Sbjct: 233 KSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLV 292
Query: 108 ------LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 161
L+ R + + D+ L+ Q++ ++ ++ L+ RCL E + RPN +V+ L
Sbjct: 293 EWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLEH 352
Query: 162 LQ 163
+Q
Sbjct: 353 IQ 354
|
Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P46573|APK1B_ARATH Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2 | Back alignment and function description |
|---|
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 101/186 (54%), Gaps = 19/186 (10%)
Query: 1 MKWAMRLRVVLHLAQALEYC-TSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 58
+ W +RL+V L A+ L + ++ +Y D IL D + N +LS FGL K+ G
Sbjct: 174 LSWTLRLKVALGAAKGLAFLHNAETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGD 233
Query: 59 KSY-STNL----AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG-----KHIPPSH---- 104
KS+ ST + + PEYL TG +T +S +YS+G +LL++LSG K+ PP
Sbjct: 234 KSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLV 293
Query: 105 --ALDLIRD-RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 161
A L+ + R L + D+ L+ Q++ ++ ++ LA RCL +E + RPN +V+ L
Sbjct: 294 EWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVVSHLEH 353
Query: 162 LQKETE 167
+Q E
Sbjct: 354 IQTLNE 359
|
Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SFT7|Y3707_ARATH Serine/threonine-protein kinase At3g07070 OS=Arabidopsis thaliana GN=At3g07070 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 88/187 (47%), Gaps = 30/187 (16%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGR--ALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 58
+ W R+R+ L A LEY K +Y DL A IL D + N +LS FGL K G
Sbjct: 175 LDWDTRIRIALGAAMGLEYLHDKANPPVIYRDLKAANILLDGEFNAKLSDFGLAKLGPVG 234
Query: 59 KSYSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR 112
+ + PEY RTG++T +S +YSFG +LL+L++G+ + +D R +
Sbjct: 235 DKQHVSSRVMGTYGYCAPEYQRTGQLTTKSDVYSFGVVLLELITGRRV-----IDTTRPK 289
Query: 113 NLQMLT-----------------DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155
+ Q L D LEG F + + V +A+ CLQ E RP +
Sbjct: 290 DEQNLVTWAQPVFKEPSRFPELADPSLEGVFPEKALNQAVAVAAMCLQEEATVRPLMSDV 349
Query: 156 VTALSPL 162
VTAL L
Sbjct: 350 VTALGFL 356
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SRH7|Y3130_ARATH Receptor-like serine/threonine-protein kinase At3g01300 OS=Arabidopsis thaliana GN=At3g01300 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 94/182 (51%), Gaps = 20/182 (10%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKG--RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD- 57
+ W++R+++ L A+ L + + +Y D IL D + N +LS FGL K++ D
Sbjct: 238 LPWSIRMKIALGAAKGLSFLHEEALKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDAPDE 297
Query: 58 GKSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG-----KHIPPS-HAL 106
GK++ + + PEY+ TG +T +S +YSFG +LL++L+G K+ P H L
Sbjct: 298 GKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 357
Query: 107 ------DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 160
L+ R L D LEG F+ ++ +LA++CL + + RP +V L
Sbjct: 358 VEWARPHLLDKRRFYRLLDPRLEGHFSVKGAQKVTQLAAQCLSRDSKIRPKMSEVVEVLK 417
Query: 161 PL 162
PL
Sbjct: 418 PL 419
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 340 | ||||||
| 225454188 | 491 | PREDICTED: probable serine/threonine-pro | 1.0 | 0.692 | 0.902 | 0.0 | |
| 356520418 | 491 | PREDICTED: probable serine/threonine-pro | 1.0 | 0.692 | 0.873 | 0.0 | |
| 356504529 | 491 | PREDICTED: probable serine/threonine-pro | 0.988 | 0.684 | 0.877 | 1e-180 | |
| 255541562 | 493 | receptor protein kinase, putative [Ricin | 1.0 | 0.689 | 0.867 | 1e-179 | |
| 224064025 | 491 | predicted protein [Populus trichocarpa] | 1.0 | 0.692 | 0.852 | 1e-176 | |
| 357507281 | 492 | hypothetical protein MTR_7g077150 [Medic | 1.0 | 0.691 | 0.850 | 1e-176 | |
| 225426412 | 488 | PREDICTED: probable serine/threonine-pro | 0.991 | 0.690 | 0.863 | 1e-175 | |
| 224127648 | 491 | predicted protein [Populus trichocarpa] | 1.0 | 0.692 | 0.847 | 1e-175 | |
| 297814269 | 490 | kinase family protein [Arabidopsis lyrat | 0.982 | 0.681 | 0.850 | 1e-173 | |
| 22328189 | 489 | BR-signaling kinase 3 [Arabidopsis thali | 0.979 | 0.680 | 0.853 | 1e-172 |
| >gi|225454188|ref|XP_002272416.1| PREDICTED: probable serine/threonine-protein kinase At5g41260 [Vitis vinifera] gi|297745267|emb|CBI40347.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/340 (90%), Positives = 324/340 (95%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
MKWAMRLRVVLHLAQALEYCT +GRALYHDLNAYRILFDEDGNPRLS FGLMKNSRDGKS
Sbjct: 152 MKWAMRLRVVLHLAQALEYCTGRGRALYHDLNAYRILFDEDGNPRLSCFGLMKNSRDGKS 211
Query: 61 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120
YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS
Sbjct: 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 271
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSA 180
CLEGQFT+DDGTELVRLASRCLQYEPRERPNPKSLV AL+PLQKETEVPSHVLMGIPHSA
Sbjct: 272 CLEGQFTNDDGTELVRLASRCLQYEPRERPNPKSLVAALTPLQKETEVPSHVLMGIPHSA 331
Query: 181 SVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDV 240
S SPLSPLGEACSR DLTAIHEILE + YKDDEG+ NELSFQMWTDQMQETLNSKKKGD
Sbjct: 332 SFSPLSPLGEACSRMDLTAIHEILESVGYKDDEGMTNELSFQMWTDQMQETLNSKKKGDA 391
Query: 241 AFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 300
AFRQKD + AI+CYTQFID GTMVSPTV ARRSLCYLMSDMPQ+ALNDAMQAQ+ISP+WH
Sbjct: 392 AFRQKDFRAAIDCYTQFIDVGTMVSPTVCARRSLCYLMSDMPQEALNDAMQAQVISPVWH 451
Query: 301 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 340
IASYLQAAAL+ +GMENEAQ ALK+GTTLEA++N+ +GQK
Sbjct: 452 IASYLQAAALTGLGMENEAQAALKDGTTLEAQRNTPSGQK 491
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356520418|ref|XP_003528859.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 297/340 (87%), Positives = 322/340 (94%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR+LFDEDGNPRLS+FGLMKNSRDGKS
Sbjct: 152 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRVLFDEDGNPRLSSFGLMKNSRDGKS 211
Query: 61 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120
YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD+IR RNLQMLTDS
Sbjct: 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDVIRGRNLQMLTDS 271
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSA 180
CLEGQF+DDDGTELVRLASRCLQYEPRERPNPKSLV AL+PLQKETEVPSHVLMGI HS
Sbjct: 272 CLEGQFSDDDGTELVRLASRCLQYEPRERPNPKSLVVALAPLQKETEVPSHVLMGIQHST 331
Query: 181 SVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDV 240
+ + LSPLGEACSR+DLTAI E+LE I YKDDEGVANELSF MWTDQMQ+TLN KKKGDV
Sbjct: 332 TFASLSPLGEACSRKDLTAIQEVLESIGYKDDEGVANELSFHMWTDQMQDTLNCKKKGDV 391
Query: 241 AFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 300
AFRQKD + AIECY+QFIDAGTMVSPTVYARRSLCYL+SDMPQ++LNDA+QAQI+SP+WH
Sbjct: 392 AFRQKDFRLAIECYSQFIDAGTMVSPTVYARRSLCYLISDMPQESLNDAIQAQIVSPVWH 451
Query: 301 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 340
IASYLQ+ AL+ +GMENEAQ ALKEGTT+E+K+N+T QK
Sbjct: 452 IASYLQSVALTGLGMENEAQAALKEGTTMESKRNATPKQK 491
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356504529|ref|XP_003521048.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 295/336 (87%), Positives = 320/336 (95%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR+LFDEDGNPRLS+FGLMKNSRDGKS
Sbjct: 152 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRVLFDEDGNPRLSSFGLMKNSRDGKS 211
Query: 61 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120
YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD+IR RNLQMLTDS
Sbjct: 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDVIRGRNLQMLTDS 271
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSA 180
CLEGQF+DDDGTELVRLASRCLQYEPRERPNPKSLV AL+PLQKETEV SH+LMGI HS
Sbjct: 272 CLEGQFSDDDGTELVRLASRCLQYEPRERPNPKSLVAALAPLQKETEVLSHILMGIQHST 331
Query: 181 SVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDV 240
+ + LSPLGEACSR+DLTAIHE+LE + YKDDEGVANELSFQMWTDQMQ+TLN KKKGDV
Sbjct: 332 TFASLSPLGEACSRKDLTAIHEVLESLGYKDDEGVANELSFQMWTDQMQDTLNCKKKGDV 391
Query: 241 AFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 300
AFRQKD + AIECY+QFID GTMVSPTVYARRSLCYL+SDMPQ+ALNDAMQA++ISP+WH
Sbjct: 392 AFRQKDFRLAIECYSQFIDTGTMVSPTVYARRSLCYLISDMPQEALNDAMQAEVISPVWH 451
Query: 301 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 336
IASYLQ+ AL+ +GMENEAQ ALKEGTTLE+K+N+T
Sbjct: 452 IASYLQSVALTGLGMENEAQAALKEGTTLESKRNAT 487
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255541562|ref|XP_002511845.1| receptor protein kinase, putative [Ricinus communis] gi|223549025|gb|EEF50514.1| receptor protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust.
Identities = 295/340 (86%), Positives = 323/340 (95%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
MKWAMRLRV LHLA+ALEYCTSKGRALYHDLNAYRILFDEDGNPRLS+FGLMKNSRDGKS
Sbjct: 154 MKWAMRLRVALHLAEALEYCTSKGRALYHDLNAYRILFDEDGNPRLSSFGLMKNSRDGKS 213
Query: 61 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120
YSTNLAFTPPEYLRTGRVTPESVIYSFGTLL+DLLSGKHIPP+HALDLIRDRNLQMLTDS
Sbjct: 214 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLVDLLSGKHIPPNHALDLIRDRNLQMLTDS 273
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSA 180
CLEGQF++DDGTELVRLASRCLQYE RERP+ KSLV AL+PLQKETEVPSHVLMGIPHSA
Sbjct: 274 CLEGQFSNDDGTELVRLASRCLQYELRERPSSKSLVAALTPLQKETEVPSHVLMGIPHSA 333
Query: 181 SVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDV 240
S+SPLSP+GEACSR+DLTAIHEIL+ + YKDDEGV NELSFQMWTD+MQETL KKKGD
Sbjct: 334 SLSPLSPIGEACSRKDLTAIHEILDGLGYKDDEGVTNELSFQMWTDEMQETLTFKKKGDS 393
Query: 241 AFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 300
AF+QKDL+DAIECYTQFIDAGTMVSPT++ARRSL +LM+DMPQ+ALNDAMQAQ+ISP+WH
Sbjct: 394 AFKQKDLRDAIECYTQFIDAGTMVSPTLFARRSLSFLMTDMPQEALNDAMQAQVISPVWH 453
Query: 301 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 340
+ASYLQA AL +GME EAQVALKEGT LEA+KN+T+ QK
Sbjct: 454 VASYLQAVALGVLGMETEAQVALKEGTNLEAQKNATSEQK 493
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224064025|ref|XP_002301354.1| predicted protein [Populus trichocarpa] gi|222843080|gb|EEE80627.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust.
Identities = 290/340 (85%), Positives = 318/340 (93%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+KW MRLRVVLHLA+ALEYCTSKGRALYHDLNAYRILFDEDGNP+LS+FGLMKNSRDGKS
Sbjct: 152 IKWPMRLRVVLHLAEALEYCTSKGRALYHDLNAYRILFDEDGNPKLSSFGLMKNSRDGKS 211
Query: 61 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120
YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS
Sbjct: 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 271
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSA 180
CLEGQF+ DDGTELVRLASRCLQYE RERP+ KSLV AL+PLQKE +VPSH+LMGIPH A
Sbjct: 272 CLEGQFSSDDGTELVRLASRCLQYELRERPSLKSLVAALTPLQKENDVPSHILMGIPHGA 331
Query: 181 SVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDV 240
S SPLSP GEACSRRDLTAI+EIL+ I YKDD+GVANELSFQMWTD+MQETLN+KKKGD
Sbjct: 332 SSSPLSPFGEACSRRDLTAINEILDNIGYKDDQGVANELSFQMWTDEMQETLNTKKKGDS 391
Query: 241 AFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 300
AF+QKD + AIECYTQFID GTMVSPTV+ARRSL YLMSD+PQ+AL+DAMQAQ+ISP+WH
Sbjct: 392 AFKQKDYRIAIECYTQFIDVGTMVSPTVFARRSLSYLMSDLPQEALSDAMQAQVISPVWH 451
Query: 301 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 340
+ASYLQA AL+ +GMENEA ALKEGT LEA+KN+ +GQK
Sbjct: 452 VASYLQAVALATLGMENEAHAALKEGTNLEAEKNANSGQK 491
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357507281|ref|XP_003623929.1| hypothetical protein MTR_7g077150 [Medicago truncatula] gi|355498944|gb|AES80147.1| hypothetical protein MTR_7g077150 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 622 bits (1604), Expect = e-176, Method: Compositional matrix adjust.
Identities = 290/341 (85%), Positives = 319/341 (93%), Gaps = 1/341 (0%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
MKWAMRLRVVLHLA+ALEYCTS GRALYHDLNAYR+LFDEDGNPRLS+FGLMKNSRDGKS
Sbjct: 152 MKWAMRLRVVLHLAEALEYCTSNGRALYHDLNAYRVLFDEDGNPRLSSFGLMKNSRDGKS 211
Query: 61 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120
YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN+QMLTDS
Sbjct: 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQMLTDS 271
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSA 180
CLEGQF++DDGTELVRLASRCLQYEPRERPN KSLV AL+PLQKETEVPSH LMGI HSA
Sbjct: 272 CLEGQFSEDDGTELVRLASRCLQYEPRERPNTKSLVAALAPLQKETEVPSHSLMGIQHSA 331
Query: 181 SVSP-LSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGD 239
++S LSPLG+ACSR+DLTAIHE+LE I YKDD+GVANELSFQMWTDQMQ++LN K+KGD
Sbjct: 332 TISASLSPLGDACSRKDLTAIHEVLENIGYKDDDGVANELSFQMWTDQMQDSLNCKQKGD 391
Query: 240 VAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW 299
AFR KD K AIECYTQFID GTMVSPTV+ARRSLCYL++DMPQ+A+NDAMQAQ+ISP+W
Sbjct: 392 AAFRHKDFKLAIECYTQFIDVGTMVSPTVHARRSLCYLINDMPQEAMNDAMQAQVISPLW 451
Query: 300 HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 340
HIASYLQ+ +LS +GM NEAQVAL EGTTLE K+N+ G+K
Sbjct: 452 HIASYLQSVSLSGLGMVNEAQVALMEGTTLEEKRNTPTGKK 492
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225426412|ref|XP_002270065.1| PREDICTED: probable serine/threonine-protein kinase At5g41260 [Vitis vinifera] gi|297742525|emb|CBI34674.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 291/337 (86%), Positives = 312/337 (92%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
MKWAMRLRV L+LAQALEYCTSKGRALYHDLNAYRI+FD+DG+PRLS FG+MKNSRDGKS
Sbjct: 152 MKWAMRLRVALYLAQALEYCTSKGRALYHDLNAYRIVFDDDGDPRLSCFGMMKNSRDGKS 211
Query: 61 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120
YSTNLAFTPPEYLRTGRVTPESV+YSFGTLLLDLLSGKHIPPSHALDLIRDRN+QMLTDS
Sbjct: 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQMLTDS 271
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSA 180
CLEGQF+ DDGTELVRLASRCLQYEPRERPNPKSLV AL PLQKETEVPSHVLMG+P S
Sbjct: 272 CLEGQFSSDDGTELVRLASRCLQYEPRERPNPKSLVAALIPLQKETEVPSHVLMGMPQSG 331
Query: 181 SVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDV 240
+ PLSPLGEAC R DLTAIHEILEK+ YKDDEG ELSFQMWT+QMQETLNSKKKGDV
Sbjct: 332 ATLPLSPLGEACLRMDLTAIHEILEKLGYKDDEGATTELSFQMWTNQMQETLNSKKKGDV 391
Query: 241 AFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 300
AFR KD + AIECYTQFID GTMVSPTV+ARRSLCYLMSDMPQ+ALNDA+QAQ+ISPIWH
Sbjct: 392 AFRHKDFRAAIECYTQFIDVGTMVSPTVFARRSLCYLMSDMPQEALNDAVQAQVISPIWH 451
Query: 301 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337
IASYLQA ALSA+G ENE++V LKEG+ LE KKN TA
Sbjct: 452 IASYLQAVALSALGRENESEVTLKEGSVLEEKKNKTA 488
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224127648|ref|XP_002320126.1| predicted protein [Populus trichocarpa] gi|222860899|gb|EEE98441.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 620 bits (1598), Expect = e-175, Method: Compositional matrix adjust.
Identities = 288/340 (84%), Positives = 316/340 (92%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+KWAMRLRVVLHLA+ALEYCTSKGRALYHDLNAYRILFDEDGNP+LS+FGLMKNSRDGKS
Sbjct: 152 IKWAMRLRVVLHLAEALEYCTSKGRALYHDLNAYRILFDEDGNPKLSSFGLMKNSRDGKS 211
Query: 61 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120
YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLD LSGKHIPPSHALDLIRDRNLQMLTDS
Sbjct: 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDHLSGKHIPPSHALDLIRDRNLQMLTDS 271
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSA 180
CLEGQF++DDGTELVRLASRCLQYE RERP+ K LV AL+PLQKET+V SH+LMGIPHSA
Sbjct: 272 CLEGQFSNDDGTELVRLASRCLQYELRERPSLKFLVAALTPLQKETDVASHILMGIPHSA 331
Query: 181 SVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDV 240
S SPLSP GEAC R+DLTAIHEIL+ I YKDD+GVANELSFQMWTD+MQETLN+KKKGD
Sbjct: 332 SSSPLSPFGEACLRKDLTAIHEILDNIGYKDDQGVANELSFQMWTDEMQETLNTKKKGDA 391
Query: 241 AFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 300
+F+QKD + AIECYTQFID GTMVSPTV+ARRSL YLMSDMPQ+ L+DAMQAQ+ISP+WH
Sbjct: 392 SFKQKDFRVAIECYTQFIDVGTMVSPTVFARRSLSYLMSDMPQEGLSDAMQAQVISPVWH 451
Query: 301 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 340
+ASYLQA AL+ +GMENEA ALKEGT +EAKKN +GQK
Sbjct: 452 VASYLQAVALATLGMENEAHAALKEGTNIEAKKNQDSGQK 491
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297814269|ref|XP_002875018.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297320855|gb|EFH51277.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 285/335 (85%), Positives = 317/335 (94%), Gaps = 1/335 (0%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
MKW MRLRVVL+LAQALEYCTSKGR LYHDLNAYR+LFDE+ NPRLSTFGLMKNSRDGKS
Sbjct: 152 MKWTMRLRVVLYLAQALEYCTSKGRTLYHDLNAYRVLFDEECNPRLSTFGLMKNSRDGKS 211
Query: 61 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120
YSTNLAFTPPEYLRTGR+TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ LTDS
Sbjct: 212 YSTNLAFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQTLTDS 271
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSA 180
CL+GQF+D DGTELVRLASRCLQYE RERPN KSLVTAL+PLQK+TEVPSHVLMG+PHS
Sbjct: 272 CLDGQFSDSDGTELVRLASRCLQYEARERPNTKSLVTALTPLQKDTEVPSHVLMGLPHSG 331
Query: 181 SVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDV 240
SVSPLSPLGEACSRRDLTA+ EIL+K+ YKDDEGV NELSFQMWTDQMQE+LNSKKKGDV
Sbjct: 332 SVSPLSPLGEACSRRDLTAMLEILDKLGYKDDEGVTNELSFQMWTDQMQESLNSKKKGDV 391
Query: 241 AFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 300
AFRQKD ++AIECYTQFID G M+SPTV ARRSLCYLMSDMP++AL+DA+QAQ+ISP+WH
Sbjct: 392 AFRQKDFREAIECYTQFIDGG-MISPTVCARRSLCYLMSDMPKEALDDAIQAQVISPVWH 450
Query: 301 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 335
+ASYLQ+A+L+ +GME E+Q+ALKEG+ LEAK+N+
Sbjct: 451 VASYLQSASLAFLGMEKESQIALKEGSNLEAKRNA 485
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|22328189|ref|NP_191980.2| BR-signaling kinase 3 [Arabidopsis thaliana] gi|17064838|gb|AAL32573.1| Unknown protein [Arabidopsis thaliana] gi|20259854|gb|AAM13274.1| unknown protein [Arabidopsis thaliana] gi|332656524|gb|AEE81924.1| BR-signaling kinase 3 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 609 bits (1570), Expect = e-172, Method: Compositional matrix adjust.
Identities = 285/334 (85%), Positives = 312/334 (93%), Gaps = 1/334 (0%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
MKW MRLRVVL+LAQALEYCTSKGR LYHDLNAYR+LFDE+ NPRLSTFGLMKNSRDGKS
Sbjct: 151 MKWTMRLRVVLYLAQALEYCTSKGRTLYHDLNAYRVLFDEECNPRLSTFGLMKNSRDGKS 210
Query: 61 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120
YSTNLAFTPPEYLRTGR+TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ LTDS
Sbjct: 211 YSTNLAFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQTLTDS 270
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSA 180
CL+GQF+D DGTELVRLASRCLQYE RERPN KSLVTAL+PLQKETEV SHVLMG+PHS
Sbjct: 271 CLDGQFSDSDGTELVRLASRCLQYEARERPNTKSLVTALTPLQKETEVLSHVLMGLPHSG 330
Query: 181 SVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDV 240
SVSPLSPLGEACSRRDLTA+ EILEK+ YKDDEGV NELSF MWTDQMQE+LNSKKKGDV
Sbjct: 331 SVSPLSPLGEACSRRDLTAMLEILEKLGYKDDEGVTNELSFHMWTDQMQESLNSKKKGDV 390
Query: 241 AFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 300
AFRQKD ++AIECYTQFID G M+SPTV ARRSLCYLMSDMP++AL+DA+QAQ+ISP+WH
Sbjct: 391 AFRQKDFREAIECYTQFIDGG-MISPTVCARRSLCYLMSDMPKEALDDAIQAQVISPVWH 449
Query: 301 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 334
+ASYLQ+A+L +GME E+Q+ALKEG+ LEAK N
Sbjct: 450 VASYLQSASLGILGMEKESQIALKEGSNLEAKMN 483
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 340 | ||||||
| TAIR|locus:2127118 | 489 | BSK3 "brassinosteroid-signalin | 0.979 | 0.680 | 0.853 | 1.5e-154 | |
| TAIR|locus:2031279 | 487 | BSK7 "brassinosteroid-signalin | 0.982 | 0.685 | 0.832 | 4.5e-153 | |
| TAIR|locus:2155115 | 487 | BSK8 "brassinosteroid-signalin | 0.982 | 0.685 | 0.805 | 5e-147 | |
| TAIR|locus:2154538 | 489 | BSK5 "brassinosteroid-signalin | 0.982 | 0.683 | 0.782 | 4.2e-143 | |
| TAIR|locus:2084475 | 490 | BSK6 "brassinosteroid-signalin | 0.985 | 0.683 | 0.752 | 6e-135 | |
| TAIR|locus:2198160 | 483 | BSK4 "brassinosteroid-signalin | 0.979 | 0.689 | 0.732 | 4e-129 | |
| TAIR|locus:2122058 | 512 | BSK1 "brassinosteroid-signalin | 0.976 | 0.648 | 0.644 | 1e-116 | |
| TAIR|locus:2142315 | 489 | BSK2 "brassinosteroid-signalin | 0.988 | 0.687 | 0.600 | 2.6e-109 | |
| TAIR|locus:2083499 | 477 | BSK9 "brassinosteroid-signalin | 0.973 | 0.693 | 0.617 | 8.6e-104 | |
| TAIR|locus:2150074 | 499 | BSK10 "brassinosteroid-signali | 0.973 | 0.663 | 0.583 | 9.1e-100 |
| TAIR|locus:2127118 BSK3 "brassinosteroid-signaling kinase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1507 (535.5 bits), Expect = 1.5e-154, P = 1.5e-154
Identities = 285/334 (85%), Positives = 312/334 (93%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
MKW MRLRVVL+LAQALEYCTSKGR LYHDLNAYR+LFDE+ NPRLSTFGLMKNSRDGKS
Sbjct: 151 MKWTMRLRVVLYLAQALEYCTSKGRTLYHDLNAYRVLFDEECNPRLSTFGLMKNSRDGKS 210
Query: 61 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120
YSTNLAFTPPEYLRTGR+TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ LTDS
Sbjct: 211 YSTNLAFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQTLTDS 270
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSA 180
CL+GQF+D DGTELVRLASRCLQYE RERPN KSLVTAL+PLQKETEV SHVLMG+PHS
Sbjct: 271 CLDGQFSDSDGTELVRLASRCLQYEARERPNTKSLVTALTPLQKETEVLSHVLMGLPHSG 330
Query: 181 SVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDV 240
SVSPLSPLGEACSRRDLTA+ EILEK+ YKDDEGV NELSF MWTDQMQE+LNSKKKGDV
Sbjct: 331 SVSPLSPLGEACSRRDLTAMLEILEKLGYKDDEGVTNELSFHMWTDQMQESLNSKKKGDV 390
Query: 241 AFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 300
AFRQKD ++AIECYTQFID G M+SPTV ARRSLCYLMSDMP++AL+DA+QAQ+ISP+WH
Sbjct: 391 AFRQKDFREAIECYTQFIDGG-MISPTVCARRSLCYLMSDMPKEALDDAIQAQVISPVWH 449
Query: 301 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 334
+ASYLQ+A+L +GME E+Q+ALKEG+ LEAK N
Sbjct: 450 VASYLQSASLGILGMEKESQIALKEGSNLEAKMN 483
|
|
| TAIR|locus:2031279 BSK7 "brassinosteroid-signaling kinase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1493 (530.6 bits), Expect = 4.5e-153, P = 4.5e-153
Identities = 278/334 (83%), Positives = 307/334 (91%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
MKWAMRLRV LH+AQALEYCT KGRALYHDLNAYR+LFD+D NPRLS FGLMKNSRDGKS
Sbjct: 152 MKWAMRLRVALHIAQALEYCTGKGRALYHDLNAYRVLFDDDSNPRLSCFGLMKNSRDGKS 211
Query: 61 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120
YSTNLAFTPPEYLRTGRVTPESV+YS+GTLLLDLLSGKHIPPSHALDLIRDRN+QML DS
Sbjct: 212 YSTNLAFTPPEYLRTGRVTPESVMYSYGTLLLDLLSGKHIPPSHALDLIRDRNIQMLIDS 271
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSA 180
CLEGQF+ DDGTEL+RLASRCLQYEPRERPNPKSLVTA+ PLQK+ E PSH LMGIP SA
Sbjct: 272 CLEGQFSSDDGTELIRLASRCLQYEPRERPNPKSLVTAMIPLQKDLETPSHQLMGIPSSA 331
Query: 181 SVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDV 240
S +PLSPLGEAC R DLTAIHEILEK+SYKDDEG A ELSFQMWT+QMQ++LN KKKGDV
Sbjct: 332 STTPLSPLGEACLRTDLTAIHEILEKLSYKDDEGAATELSFQMWTNQMQDSLNFKKKGDV 391
Query: 241 AFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 300
AFR K+ +AI+CY+QFI+ GTMVSPTVYARRSLCYLM++MPQ+ALNDAMQAQ+ISP WH
Sbjct: 392 AFRHKEFANAIDCYSQFIEGGTMVSPTVYARRSLCYLMNEMPQEALNDAMQAQVISPAWH 451
Query: 301 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 334
IASYLQA ALSA+G ENEA ALK+G+ LE+K+N
Sbjct: 452 IASYLQAVALSALGQENEAHAALKDGSMLESKRN 485
|
|
| TAIR|locus:2155115 BSK8 "brassinosteroid-signaling kinase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1436 (510.6 bits), Expect = 5.0e-147, P = 5.0e-147
Identities = 269/334 (80%), Positives = 300/334 (89%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
MKWAMRLRV LH+AQALEYCTSKGRALYHDLNAYR+LFD+D NPRLS FGLMKNSRDGKS
Sbjct: 152 MKWAMRLRVALHIAQALEYCTSKGRALYHDLNAYRVLFDDDANPRLSCFGLMKNSRDGKS 211
Query: 61 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120
YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN+QML DS
Sbjct: 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQMLMDS 271
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSA 180
LEGQF+ DDGTEL+RLASRCLQYEPRERPNPKSLV+A+ PLQK+ E+ SH L+G+P+SA
Sbjct: 272 GLEGQFSSDDGTELIRLASRCLQYEPRERPNPKSLVSAMIPLQKDLEIASHQLLGVPNSA 331
Query: 181 SVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDV 240
+ + LSPLGEAC R DLTAIHEI+EK+ YKDDEG ELSFQMWTDQMQ+TL KKKGD
Sbjct: 332 TTTALSPLGEACLRSDLTAIHEIIEKLGYKDDEGATTELSFQMWTDQMQDTLVFKKKGDS 391
Query: 241 AFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 300
AFR KD AIECY+QFI+ GTM SPTV+AR+SLCYLM+DMP++ALN+AMQAQ+ISP WH
Sbjct: 392 AFRHKDFAKAIECYSQFIEVGTMGSPTVHARQSLCYLMNDMPREALNNAMQAQVISPAWH 451
Query: 301 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 334
IASYLQA ALSA+G ENEA ALK+G LE+K+N
Sbjct: 452 IASYLQAVALSALGQENEAHTALKDGAMLESKRN 485
|
|
| TAIR|locus:2154538 BSK5 "brassinosteroid-signaling kinase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1399 (497.5 bits), Expect = 4.2e-143, P = 4.2e-143
Identities = 266/340 (78%), Positives = 304/340 (89%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
MKW+MRLRV L+LAQALEYC+SKGRALYHDLNAYRILFD+DGNPRLS FGLMKNSRDGKS
Sbjct: 148 MKWSMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKS 207
Query: 61 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120
YSTNLAFTPPEYLRTGRV PESV+YSFGTLLLDLLSGKHIPPSHALDLIR +N ML DS
Sbjct: 208 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS 267
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSA 180
CL+G F++DDGT+LVRLASRCLQYE RERPN KSLV++L+PLQKET++PSHVLMGIPH A
Sbjct: 268 CLDGHFSNDDGTDLVRLASRCLQYEARERPNVKSLVSSLAPLQKETDIPSHVLMGIPHGA 327
Query: 181 SVSP-----LSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSK 235
+ SP L+PLG+ACSR DLTAIHEILEK+ YKDDEGVANELSFQ+WTDQ+QETLNSK
Sbjct: 328 A-SPKETTSLTPLGDACSRHDLTAIHEILEKVGYKDDEGVANELSFQVWTDQIQETLNSK 386
Query: 236 KKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII 295
K+GD AF+ KD A+ECYTQFI+ GTMVSPTV+ARR LCYLMS+MPQ+AL DAMQAQ++
Sbjct: 387 KQGDAAFKGKDFVTAVECYTQFIEDGTMVSPTVFARRCLCYLMSNMPQEALGDAMQAQVV 446
Query: 296 SPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 335
SP W A YLQAAAL ++GM+ +A LK+GT+LEAKK++
Sbjct: 447 SPEWPTAFYLQAAALFSLGMDKDACETLKDGTSLEAKKHN 486
|
|
| TAIR|locus:2084475 BSK6 "brassinosteroid-signaling kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1322 (470.4 bits), Expect = 6.0e-135, P = 6.0e-135
Identities = 256/340 (75%), Positives = 292/340 (85%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
MKWAMRLRV L LAQALEYC++KGRALYHDLNAYR+LFD+DGNPRLS FGLMKNSRDGKS
Sbjct: 149 MKWAMRLRVALCLAQALEYCSNKGRALYHDLNAYRVLFDKDGNPRLSCFGLMKNSRDGKS 208
Query: 61 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120
YSTNLAFTPPEYLRTGRVTPESV++SFGT+LLDL+SGKHIPPSHALDLIR +N ML DS
Sbjct: 209 YSTNLAFTPPEYLRTGRVTPESVVFSFGTVLLDLMSGKHIPPSHALDLIRGKNCAMLMDS 268
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSA 180
LEG F+++DGTELVRLA+RCLQYE RERPN KSLVT+L LQKE++V S+VLMGIPH
Sbjct: 269 ALEGHFSNEDGTELVRLATRCLQYEARERPNVKSLVTSLVTLQKESDVASYVLMGIPHET 328
Query: 181 SV---SPLS--PLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSK 235
SPLS P G+AC R DLTAI EIL KI YKDDEG+ANELSFQMWT+QMQE+LNSK
Sbjct: 329 EAEEESPLSLTPFGDACLRVDLTAIQEILSKIGYKDDEGIANELSFQMWTNQMQESLNSK 388
Query: 236 KKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII 295
K+GD+AFR KD A++CYTQFID GTMVSPTV+ARR L YLM+D Q+AL DA+QAQ++
Sbjct: 389 KQGDLAFRSKDFTTAVDCYTQFIDGGTMVSPTVHARRCLSYLMNDNAQEALTDALQAQVV 448
Query: 296 SPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 335
SP W A YLQAA L +GME +AQ ALK+GTTLEAKK++
Sbjct: 449 SPDWPTALYLQAACLFKLGMEADAQQALKDGTTLEAKKSN 488
|
|
| TAIR|locus:2198160 BSK4 "brassinosteroid-signaling kinase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1267 (451.1 bits), Expect = 4.0e-129, P = 4.0e-129
Identities = 249/340 (73%), Positives = 289/340 (85%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
MKWAMRLRV L++++ALEYC++ G LYHDLNAYR+LFDE+ NPRLSTFGLMKNSRDGKS
Sbjct: 149 MKWAMRLRVALYISEALEYCSNNGHTLYHDLNAYRVLFDEECNPRLSTFGLMKNSRDGKS 208
Query: 61 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120
YSTNLAFTPPEYLRTGR+T ESVIYSFGTLLLDLL+GKHIPPSHALDLIRDRNLQ LTDS
Sbjct: 209 YSTNLAFTPPEYLRTGRITAESVIYSFGTLLLDLLTGKHIPPSHALDLIRDRNLQTLTDS 268
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSA 180
CLEGQF+D DGTELVRL S CLQYE RERPN KSLVTAL LQK+TEV SHVLMG+P S
Sbjct: 269 CLEGQFSDSDGTELVRLTSCCLQYEARERPNIKSLVTALISLQKDTEVLSHVLMGLPQSG 328
Query: 181 S-VSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGD 239
+ SP SP EACS +DLT++ EILEKI YKDDE +LSF MWT+QMQE +NSKKKGD
Sbjct: 329 TFASPPSPFAEACSGKDLTSMVEILEKIGYKDDE----DLSF-MWTEQMQEAINSKKKGD 383
Query: 240 VAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW 299
+AFR+KD +AIE YTQF+D G M+S TV RRS YLMS+M ++AL+DAM+AQ ISP+W
Sbjct: 384 IAFRRKDFSEAIEFYTQFLDLG-MISATVLVRRSQSYLMSNMAKEALDDAMKAQGISPVW 442
Query: 300 HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQ 339
++A YLQ+AALS +GME E+Q+AL EG+ LEA+K S + Q
Sbjct: 443 YVALYLQSAALSVLGMEKESQIALTEGSILEARKISASTQ 482
|
|
| TAIR|locus:2122058 BSK1 "brassinosteroid-signaling kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1150 (409.9 bits), Expect = 1.0e-116, P = 1.0e-116
Identities = 218/338 (64%), Positives = 269/338 (79%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
++WAMRLRV ++A+AL+YC+++GR LYHDLNAYR+LFDEDG+PRLS FGLMKNSRDGKS
Sbjct: 169 IEWAMRLRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKS 228
Query: 61 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120
YSTNLA+TPPEYLR GRVTPESV YSFGT+LLDLLSGKHIPPSHALD+IR +N+ +L DS
Sbjct: 229 YSTNLAYTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDS 288
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPH-- 178
LEG+F+ ++ T +V LAS+CLQYEPRERPN K LV L+PLQ +++VPS+V++GI
Sbjct: 289 HLEGKFSTEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQE 348
Query: 179 ---SASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSK 235
S PLSPLGEACSR DLTAIH+IL Y+DDEG NELSFQ WT QM++ L+++
Sbjct: 349 EAPSTPQRPLSPLGEACSRMDLTAIHQILVMTHYRDDEGT-NELSFQEWTQQMKDMLDAR 407
Query: 236 KKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII 295
K+GD +FR+KD K AI+CY+QFID GTMVSPTV+ RRSLCYL+ D P AL DAMQAQ +
Sbjct: 408 KRGDQSFREKDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCV 467
Query: 296 SPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 333
P W A Y+Q+ AL+ + M +A L E LE K+
Sbjct: 468 YPDWPTAFYMQSVALAKLNMNTDAADMLNEAAQLEEKR 505
|
|
| TAIR|locus:2142315 BSK2 "brassinosteroid-signaling kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1080 (385.2 bits), Expect = 2.6e-109, P = 2.6e-109
Identities = 203/338 (60%), Positives = 264/338 (78%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ W MR+R+ ++A+AL+YC + R +YHDLNAYRILFDE+G+PRLSTFGLMKNSRDGKS
Sbjct: 149 LPWDMRVRIADYIAEALDYCNIENRKIYHDLNAYRILFDEEGDPRLSTFGLMKNSRDGKS 208
Query: 61 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120
YSTNLA+TPPE+LRTGRV PESVI+S+GT+LLDLLSGKHIPPSHALD+IR +N +L DS
Sbjct: 209 YSTNLAYTPPEFLRTGRVIPESVIFSYGTILLDLLSGKHIPPSHALDIIRGKNALLLMDS 268
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSA 180
LEGQ+ +DD T+LV LAS+CLQ E ++RP+ K L++A++PLQK+ EV SHVLMG+P +
Sbjct: 269 SLEGQYANDDATKLVDLASKCLQSEAKDRPDTKFLLSAVAPLQKQEEVASHVLMGLPKNT 328
Query: 181 SVSP--LSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKG 238
+ P LSPLG+AC++ DL H+IL K Y+D+EG NELSFQ WT Q+QE LN+KK G
Sbjct: 329 VILPTMLSPLGKACAKMDLATFHDILLKTGYRDEEGAENELSFQEWTQQVQEMLNTKKFG 388
Query: 239 DVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPI 298
D+AFR KD K++IE Y++ + + S TV+ARR+ YLM+D + AL DAMQAQ+ P
Sbjct: 389 DIAFRDKDFKNSIEYYSKLVGMMPVPSATVFARRAFSYLMTDQQELALRDAMQAQVCIPE 448
Query: 299 WHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 336
W A YLQA ALS +GME +AQ L +G +AK+ ++
Sbjct: 449 WPTAFYLQALALSKLGMETDAQDMLNDGAAYDAKRQNS 486
|
|
| TAIR|locus:2083499 BSK9 "brassinosteroid-signaling kinase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1028 (366.9 bits), Expect = 8.6e-104, P = 8.6e-104
Identities = 210/340 (61%), Positives = 252/340 (74%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
MKW MRLRV LH A ALEYC G LYHDLN YRILFD+ GNPRLS FGLMK SR+GKS
Sbjct: 137 MKWEMRLRVALHTATALEYCNDWGIDLYHDLNTYRILFDKVGNPRLSCFGLMKCSREGKS 196
Query: 61 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120
YSTNLAF PPEYLR G V PESV +SFGTLLLDL+SG+HIPP+HALDL R +N +L DS
Sbjct: 197 YSTNLAFAPPEYLRLGTVIPESVTFSFGTLLLDLMSGRHIPPNHALDLFRGKNYLVLMDS 256
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV-PSHVLMGIPHS 179
L+GQF+D+D TEL+ LASRCL+ EP ERP+ K L++ALS L+K E+ P+ IP
Sbjct: 257 ALDGQFSDEDRTELIHLASRCLRPEPDERPSIKFLMSALSRLEKRAELWPNVKEENIPTP 316
Query: 180 ASVSP-------LSPLGEACSRRDLTAIHEILEKISY-KDDEGVANELSFQMWTDQMQET 231
+ P L+P GEAC R DL+ +HE+LEK+ Y +DD V NE SFQMWT QMQE
Sbjct: 317 SYTEPATKEPLPLTPFGEACWRVDLSGMHELLEKLGYGEDDVVVTNEFSFQMWTGQMQEN 376
Query: 232 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQ 291
++ KK GD AFR KD + AIE YT+F+ +VSPTV ARR LCYLMSDM ++AL+DAMQ
Sbjct: 377 MDYKKHGDAAFRAKDFETAIEFYTEFMSGAPVVSPTVLARRCLCYLMSDMFREALSDAMQ 436
Query: 292 AQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEA 331
Q+ SP + IA YLQAA L +GME EA+ AL+ G++LEA
Sbjct: 437 TQVASPEFSIALYLQAACLLKLGMEAEAKEALRHGSSLEA 476
|
|
| TAIR|locus:2150074 BSK10 "brassinosteroid-signaling kinase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 990 (353.6 bits), Expect = 9.1e-100, P = 9.1e-100
Identities = 200/343 (58%), Positives = 247/343 (72%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
MKW MRL+V LH A+ALEYC KG LYHDLN YRI+FD+ G P+LS FGLMKNS +GK
Sbjct: 156 MKWEMRLKVALHTARALEYCNDKGIDLYHDLNPYRIMFDKTGIPKLSCFGLMKNSHEGKI 215
Query: 61 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120
YSTNLAF PPEYLR G V ESV +SFGTLLLDL+SG+HIPP+HALDL R +N +L DS
Sbjct: 216 YSTNLAFAPPEYLRLGTVIAESVTFSFGTLLLDLMSGRHIPPNHALDLFRGKNYLVLMDS 275
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV-PSHVLMGI-PH 178
L+GQF+D+D TEL+ +ASRC + EP ERP+ K L LS LQK ++ P +V + P
Sbjct: 276 ALDGQFSDEDRTELIHVASRCFKTEPEERPSIKFLKATLSRLQKRAKLCPINVKRPMSPP 335
Query: 179 SASV----SP------LSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQM 228
S ++ P L+P G+ACSR DL++IHE+LEK+ Y++D GV NE SFQMWT +M
Sbjct: 336 SKNLPEKTKPATESLKLTPFGDACSRADLSSIHELLEKLGYEEDNGVGNEFSFQMWTGEM 395
Query: 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALND 288
QE ++ KK GD AF KD AIE YT+F+ VSPTV ARR LCYLM++M +AL+D
Sbjct: 396 QENMDYKKHGDAAFLAKDFDTAIEFYTEFMTGAPTVSPTVLARRCLCYLMTEMFSEALSD 455
Query: 289 AMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEA 331
AMQAQ+ SP W I YLQAA L + ME EA+ AL+ G+ LEA
Sbjct: 456 AMQAQVASPEWPIPLYLQAACLFKLEMEAEAKEALRHGSALEA 498
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 340 | |||
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 2e-14 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 1e-12 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 2e-12 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 5e-11 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 1e-10 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 1e-10 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 3e-10 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 1e-09 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 1e-09 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 4e-09 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 7e-09 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 1e-08 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 2e-08 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 3e-08 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 4e-08 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 9e-08 | |
| pfam13414 | 69 | pfam13414, TPR_11, TPR repeat | 1e-07 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 1e-07 | |
| cd00189 | 100 | cd00189, TPR, Tetratricopeptide repeat domain; typ | 5e-07 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 3e-06 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 5e-06 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 5e-06 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 6e-06 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 7e-06 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 8e-06 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 8e-06 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 1e-05 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 1e-05 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 1e-05 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 2e-05 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 2e-05 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 2e-05 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 3e-05 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 3e-05 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 3e-05 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 3e-05 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 4e-05 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 4e-05 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 4e-05 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 5e-05 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 6e-05 | |
| cd05102 | 338 | cd05102, PTKc_VEGFR3, Catalytic domain of the Prot | 6e-05 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 6e-05 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 7e-05 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 7e-05 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 8e-05 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 8e-05 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 9e-05 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 1e-04 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 2e-04 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 2e-04 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 2e-04 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 2e-04 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 3e-04 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 4e-04 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 4e-04 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 4e-04 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 4e-04 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 4e-04 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 4e-04 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 5e-04 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 6e-04 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 8e-04 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 8e-04 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 8e-04 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 8e-04 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 9e-04 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 0.001 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 0.001 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 0.001 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 0.001 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 0.001 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 0.001 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 0.001 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 0.001 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 0.002 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 0.002 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 0.002 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 0.002 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 0.002 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 0.002 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 0.002 | |
| cd05054 | 337 | cd05054, PTKc_VEGFR, Catalytic domain of the Prote | 0.002 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 0.002 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 0.003 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 0.003 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 0.003 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 0.003 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 0.003 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 0.003 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 0.004 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 0.004 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 0.004 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 0.004 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 71.1 bits (175), Expect = 2e-14
Identities = 44/163 (26%), Positives = 64/163 (39%), Gaps = 46/163 (28%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDED-GNPRLSTFGLMKNSRDG 58
+ LR++L + + LEY S G + H DL IL D D G +L+ FGL K
Sbjct: 89 LSEDEILRILLQILEGLEYLHSNG--IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSD 146
Query: 59 KSYST----NLAFTPPEYLR-TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 113
KS A+ PE L G + +S I+S G +L +L DLIR
Sbjct: 147 KSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------PELKDLIR--- 195
Query: 114 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156
+ LQ +P +RP+ K ++
Sbjct: 196 --------------------------KMLQKDPEKRPSAKEIL 212
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 66.5 bits (163), Expect = 1e-12
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 8 RVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 66
++ L + + LEY S G + H DL IL DE+G +++ FGL K S T
Sbjct: 102 KIALQILRGLEYLHSNG--IIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLTTFV 159
Query: 67 FTP----PEYLRTGR-VTPESVIYSFGTLLLDLLSGKHI-PPSHALDLIR--DRNLQMLT 118
TP PE L G P+ ++S G +L +LL+GK + LD ++ R L
Sbjct: 160 GTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPL 219
Query: 119 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156
+ + E L +CL +P +RP + ++
Sbjct: 220 EF--DEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEIL 255
|
Length = 260 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 66.1 bits (161), Expect = 2e-12
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 19/165 (11%)
Query: 7 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNL 65
L+ L +A+ +EY SK + ++ DL A IL EDG ++S FGL + S + +
Sbjct: 103 LQFSLDVAEGMEYLESK-KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPV 161
Query: 66 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEG 124
+T PE L+ + + +S ++S+G LL ++ S G+ P +L +++ C+E
Sbjct: 162 KWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKE---------CVEK 212
Query: 125 QFTDDDGTE----LVRLASRCLQYEPRERPNPKSLVTALSPLQKE 165
+ + + L + C + EP++RP+ L L+KE
Sbjct: 213 GYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLR---EKLEKE 254
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 61.6 bits (149), Expect = 5e-11
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 11/151 (7%)
Query: 7 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 64
+++V + A +EY SK ++ DL A L E ++S FG+ + DG ST
Sbjct: 97 IQMVENAAAGMEYLESK-HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGM 155
Query: 65 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120
+ +T PE L GR + ES ++SFG LL + S +P ++ + ++ + +
Sbjct: 156 KQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYAN----LSNQQTREAIEQ 211
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPN 151
+ + + RL RC +Y+P +RP+
Sbjct: 212 GVRLPCPELCPDAVYRLMERCWEYDPGQRPS 242
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 60.6 bits (148), Expect = 1e-10
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 22/169 (13%)
Query: 2 KWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ L L +A+ +EY SK H DL A L E+ ++S FGL ++ D
Sbjct: 101 SLSDLLSFALQIARGMEYLESKN--FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY 158
Query: 61 YSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GK----HIPPSHALDLIR 110
Y + PE L+ G+ T +S ++SFG LL ++ + G+ + + L+ ++
Sbjct: 159 YKVKGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLK 218
Query: 111 DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 159
+C EL +L +C +P +RP LV L
Sbjct: 219 KGYRLPKPPNCPP---------ELYKLMLQCWAEDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 60.6 bits (148), Expect = 1e-10
Identities = 39/159 (24%), Positives = 61/159 (38%), Gaps = 22/159 (13%)
Query: 8 RVVLHLAQALEYCTSKGRALYHDL---NAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN 64
+ + ALEY SKG ++ DL N IL DEDG+ +L+ FGL + G+ +T
Sbjct: 101 FYLRQILSALEYLHSKGI-VHRDLKPEN---ILLDEDGHVKLADFGLARQLDPGEKLTTF 156
Query: 65 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK-----HIPPSHALDLIRDRNLQM 116
+ PE L I+S G +L +LL+GK I
Sbjct: 157 VGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF 216
Query: 117 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155
+ +L+R + L +P +R +
Sbjct: 217 PPPEWD----ISPEAKDLIR---KLLVKDPEKRLTAEEA 248
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 59.5 bits (145), Expect = 3e-10
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 22/170 (12%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGK 59
+ + L L +A+ +EY SK H DL A L E+ ++S FGL ++ D
Sbjct: 99 LSLSDLLSFALQIARGMEYLESKN--FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 156
Query: 60 SYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GK----HIPPSHALDLI 109
Y + PE L+ G+ T +S ++SFG LL ++ + G+ + L+ +
Sbjct: 157 YYRKRGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYL 216
Query: 110 RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 159
++ +C EL L +C +P +RP LV L
Sbjct: 217 KNGYRLPQPPNCPP---------ELYDLMLQCWAEDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 57.9 bits (141), Expect = 1e-09
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 21/165 (12%)
Query: 6 RLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN- 64
L + +A+ +EY SK + ++ DL A L ED ++S FGL ++ D Y
Sbjct: 107 LLSFAIQIAKGMEYLASK-KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKT 165
Query: 65 -----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNL 114
+ + PE L+ G T +S ++SFG LL ++ + G + L+ +R
Sbjct: 166 GGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYR 225
Query: 115 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 159
+ C + EL L C Q +P +RP LV L
Sbjct: 226 LPKPEYCPD---------ELYELMLSCWQLDPEDRPTFSELVERL 261
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 1e-09
Identities = 44/160 (27%), Positives = 63/160 (39%), Gaps = 19/160 (11%)
Query: 7 LRVVLHLAQALEYC----TSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS 62
R++ L AL C L+ DL I D + N +L FGL K S++
Sbjct: 108 WRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFA 167
Query: 63 TNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 118
TP PE L +S I+S G L+ +L + PP A RN L
Sbjct: 168 KTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALS--PPFTA------RNQLQLA 219
Query: 119 DSCLEGQFTDDDG---TELVRLASRCLQYEPRERPNPKSL 155
EG+F +EL + L +P +RP+ + L
Sbjct: 220 SKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEEL 259
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 56.0 bits (136), Expect = 4e-09
Identities = 44/143 (30%), Positives = 63/143 (44%), Gaps = 15/143 (10%)
Query: 13 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP--- 69
+ ALEY S G +Y DL IL D DG+ +L+ FGL K S + TP
Sbjct: 102 IVLALEYLHSLG-IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYL 160
Query: 70 -PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ--F 126
PE L +S G LL ++L+GK PP +A + + + + L+ F
Sbjct: 161 APEVLLGKGYGKAVDWWSLGVLLYEMLTGK--PPFYA------EDRKEIYEKILKDPLRF 212
Query: 127 TDDDGTELVRLASRCLQYEPRER 149
+ E L S LQ +P +R
Sbjct: 213 PEFLSPEARDLISGLLQKDPTKR 235
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 7e-09
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 29/164 (17%)
Query: 4 AMRLRVVLHL----AQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 59
+ ++ +L + A +EY SK ++ DL A L E+ ++S FG M +G
Sbjct: 89 RLTVKKLLQMSLDAAAGMEYLESKN-CIHRDLAARNCLVGENNVLKISDFG-MSREEEGG 146
Query: 60 SYSTN-------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALD 107
Y+ + + +T PE L GR T ES ++S+G LL + S P +
Sbjct: 147 IYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRE 206
Query: 108 LIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150
I + +M C E E+ RL +C Y+P RP
Sbjct: 207 RI-ESGYRMPAPQLCPE---------EIYRLMLQCWAYDPENRP 240
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 55.9 bits (133), Expect = 1e-08
Identities = 56/262 (21%), Positives = 89/262 (33%), Gaps = 28/262 (10%)
Query: 7 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN-PRLSTFGLMKNSRDGKSYSTN- 64
L ++ + ALEY SKG ++ D+ IL D DG +L FGL K D S S+
Sbjct: 104 LFILAQILSALEYLHSKG-IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIP 162
Query: 65 ---------LAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKH--------IPPSH 104
+ PE L + S I+S G L +LL+G S
Sbjct: 163 ALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQ 222
Query: 105 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA--LSPL 162
L +I + L + L + L +P+ R + S ++ L+ L
Sbjct: 223 TLKIILELPTPSLASPLSP-SNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHL 281
Query: 163 QKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQ 222
+ + S +L + L P EA I DD + EL+
Sbjct: 282 KLKESDLSDLLKPDDSAPLRLSLPPSLEALISS--LNSLAISGSDLKLDDSNFSKELAPN 339
Query: 223 MWTDQMQETLNSKKKGDVAFRQ 244
+ + + + R
Sbjct: 340 GVSSSPHNSSSLLLSTASSKRS 361
|
Length = 384 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 53.8 bits (129), Expect = 2e-08
Identities = 50/171 (29%), Positives = 75/171 (43%), Gaps = 19/171 (11%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+K ++ L A + Y SK ++ DL A L E+ ++S FG+ + DG
Sbjct: 90 LKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY 148
Query: 61 YSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNL 114
S+ L +T PE L GR + ES ++S+G LL + S P P R++
Sbjct: 149 SSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVE 208
Query: 115 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 165
+ SC Q DD + ++ RC Y+P RP S LQKE
Sbjct: 209 KGYRMSC--PQKCPDD---VYKVMQRCWDYKPENRPK-------FSELQKE 247
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 53.7 bits (130), Expect = 3e-08
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 25/172 (14%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKN-SRDG 58
+ L++ L +A+ +EY SK H DL A L E+ ++S FGL ++ D
Sbjct: 99 LTLKDLLQMALQIAKGMEYLESKN--FVHRDLAARNCLVTENLVVKISDFGLSRDIYEDD 156
Query: 59 KSYSTNLAFTP-----PEYLRTGRVTPESVIYSFGTLLLDLLSG-----KHIPPSHALDL 108
P PE L+ G+ T +S ++SFG LL ++ + + L+L
Sbjct: 157 YYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEL 216
Query: 109 IRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 159
+ D ++ ++C + EL L +C Y+P +RP LV L
Sbjct: 217 LEDGY-RLPRPENCPD---------ELYELMLQCWAYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 4e-08
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 24/170 (14%)
Query: 7 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK--NSRDGKSYSTN 64
L + + ++Y S+ R ++ DL A IL + + ++S FGL K Y
Sbjct: 112 LLFSSQICKGMDYLGSQ-RYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKE 170
Query: 65 LAFTP-----PEYLRTGRVTPESVIYSFGTLLLDLLS-GKH--IPPSHALDLIRDRNLQM 116
+P PE LRT + + S ++SFG L +L + G PP+ L +I QM
Sbjct: 171 PGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQM 230
Query: 117 LTDSCLEGQFTDDDGTELVR----------LASRCLQYEPRERPNPKSLV 156
+ LE +G L R L C + EP++RP+ L+
Sbjct: 231 IVTRLLE---LLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLI 277
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 52.2 bits (126), Expect = 9e-08
Identities = 36/148 (24%), Positives = 60/148 (40%), Gaps = 15/148 (10%)
Query: 15 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL---MKNSRDGKSYSTNLAFTPPE 71
+ LEY S G ++ D+ A IL DG +L FGL + +++ + + PE
Sbjct: 109 KGLEYLHSNGI-IHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPE 167
Query: 72 YLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 131
+ ++ I+S G ++L GK PP +L + L + G +
Sbjct: 168 VINGKPYDYKADIWSLGITAIELAEGK--PPYS--ELPPMKALFKIAT---NGPPGLRNP 220
Query: 132 ----TELVRLASRCLQYEPRERPNPKSL 155
E +CLQ P +RP + L
Sbjct: 221 EKWSDEFKDFLKKCLQKNPEKRPTAEQL 248
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|222112 pfam13414, TPR_11, TPR repeat | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 1e-07
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 235 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYL-MSDMPQDALNDAMQAQ 293
K G+ F+ D +AIE Y + ++ + Y +L YL + ++AL D +A
Sbjct: 7 KNLGNALFKLGDYDEAIEAYEKALELDPD-NAEAYYNLALAYLKLGKDYEEALEDLEKAL 65
Query: 294 IISP 297
+ P
Sbjct: 66 ELDP 69
|
Length = 69 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 51.6 bits (124), Expect = 1e-07
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 14/155 (9%)
Query: 11 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTP 69
L + + +EY K ++ DL A +L ED ++S FGL K + G S + +T
Sbjct: 109 LDVCEGMEYLEEK-NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTA 167
Query: 70 PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDR---NLQMLTDSCLEGQ 125
PE LR + + +S ++SFG LL ++ S +P P L + +M EG
Sbjct: 168 PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRM---EAPEGC 224
Query: 126 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 160
E+ ++ C + +P +RP K L L+
Sbjct: 225 -----PPEVYKVMKDCWELDPAKRPTFKQLREQLA 254
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|238112 cd00189, TPR, Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and Cdc27p components of the cyclosome/APC, the Pex5p/Pas10p receptor for peroxisomal targeting signals, the Tom70p co-receptor for mitochondrial targeting signals, Ser/Thr phosphatase 5C and the p110 subunit of O-GlcNAc transferase; three copies of the repeat are present here | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 5e-07
Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Query: 235 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 294
G++ ++ D +A+E Y + ++ + Y + Y ++AL D +A
Sbjct: 4 LNLGNLYYKLGDYDEALEYYEKALELDPD-NADAYYNLAAAYYKLGKYEEALEDYEKALE 62
Query: 295 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK 332
+ P A Y A +G EA A ++ L+
Sbjct: 63 LDPDNAKAYYNLGLAYYKLGKYEEALEAYEKALELDPN 100
|
Length = 100 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 3e-06
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 16/155 (10%)
Query: 9 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 68
++ + LEY S + ++ D+ A IL +E+G +L+ FG+ D + + T
Sbjct: 104 ILYQTLKGLEYLHSN-KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGT 162
Query: 69 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDS 120
P PE ++ ++ I+S G +++ GK I P A+ +I ++ L+D
Sbjct: 163 PFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDP 222
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155
+ E +CL +P ERP+ L
Sbjct: 223 -------EKWSPEFNDFVKKCLVKDPEERPSAIQL 250
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 5e-06
Identities = 37/164 (22%), Positives = 67/164 (40%), Gaps = 25/164 (15%)
Query: 11 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 64
+ +A + Y SK R ++ DL A IL D ++ FGLM+ + +
Sbjct: 104 VQIANGMRYLESK-RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKV 162
Query: 65 -LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-----GKHIPPSHALDLIRDRNLQMLT 118
A+ PE LRT + S ++ FG L ++ + + S L I D+ + L
Sbjct: 163 PFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKI-DKEGERLE 221
Query: 119 --DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 160
++C + ++ + +C + P +RP +L L
Sbjct: 222 RPEACPQ---------DIYNVMLQCWAHNPADRPTFAALREFLP 256
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 46.8 bits (111), Expect = 5e-06
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 18/165 (10%)
Query: 6 RLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST- 63
+L V LA AL + KG L H ++ A +L + + + +K S G S +
Sbjct: 102 KLEVAKQLAWALHFLEDKG--LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL 159
Query: 64 -------NLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 115
+ + PPE + + ++ + +SFGT L ++ SG P S ALD + LQ
Sbjct: 160 PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLS-ALD--SQKKLQ 216
Query: 116 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 160
D Q TEL L ++C+ YEP RP+ ++++ L+
Sbjct: 217 FYED---RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 46.8 bits (111), Expect = 6e-06
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 18/165 (10%)
Query: 12 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY-------STN 64
+ + + Y S+ ++ DL A +L D D ++ FGL K +G Y +
Sbjct: 115 QICEGMAYLHSQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 173
Query: 65 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHIPPSHALDLIRDRNLQM----L 117
+ + E L+ + + S ++SFG L +LL+ K PP ++I + QM L
Sbjct: 174 VFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRL 233
Query: 118 TDSCLEGQ---FTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 159
+ G + E+ L C + E + RP +SL+ L
Sbjct: 234 IELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPIL 278
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 7e-06
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 1 MKWAMRLRVVLHLAQALEY--CTSKGRALYHDLNAYRILFDEDGNPRL--STFGLMKNSR 56
+ W R ++ + +A+AL + C + +L+ +I+ D P L S GL+
Sbjct: 777 LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLL--CT 834
Query: 57 DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA--------LDL 108
D K + ++ A+ PE T +T +S IY FG +L++LL+GK P+ A ++
Sbjct: 835 DTKCFISS-AYVAPETRETKDITEKSDIYGFGLILIELLTGKS--PADAEFGVHGSIVEW 891
Query: 109 IR----DRNLQMLTDSCLEGQFT--DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 162
R D +L M D + G + ++ E++ LA C +P RP ++ L
Sbjct: 892 ARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA 951
Query: 163 QKET 166
+ +
Sbjct: 952 SRSS 955
|
Length = 968 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 8e-06
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 7 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST-NL 65
L+ L + +A+EY + ++ DL A +L ED ++S FGL K + + +
Sbjct: 105 LKFSLDVCEAMEYLEANN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 163
Query: 66 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 101
+T PE LR + + +S ++SFG LL ++ S +P
Sbjct: 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 8e-06
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 13 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYS--TNLAFT 68
LA AL++ S G +Y DL IL DE+G+ +L+ FGL K S D K+YS + +
Sbjct: 107 LALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYM 165
Query: 69 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 101
PE + T + +SFG L+ ++L+G +P
Sbjct: 166 APEVVNRRGHTQSADWWSFGVLMFEMLTG-SLP 197
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 1e-05
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 17 LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEY 72
L++ SKG +Y DL IL D DG+ +++ FG+ K + G + + TP PE
Sbjct: 109 LQFLHSKG-IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEI 167
Query: 73 LRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD 107
L + +SFG LL ++L G+ P H D
Sbjct: 168 LLGQKYNTSVDWWSFGVLLYEMLIGQ--SPFHGHD 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 1e-05
Identities = 46/170 (27%), Positives = 67/170 (39%), Gaps = 37/170 (21%)
Query: 7 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG----LMKNSRDGKSYS 62
L+ VL + LEY S G+ ++ D+ A IL EDG+ +++ FG L +
Sbjct: 108 LKEVL---KGLEYLHSNGQ-IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVR 163
Query: 63 TNLAFTP----PEYLRTGRVTPESV-IYSFGTLLLDLLSGK----HIPPSHALDLIRDRN 113
TP PE + I+SFG ++L +G PP L
Sbjct: 164 KTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVL------- 216
Query: 114 LQMLT----DSCLEGQFTDDD----GTELVRLASRCLQYEPRERPNPKSL 155
MLT LE T D ++ S CLQ +P +RP + L
Sbjct: 217 --MLTLQNDPPSLE---TGADYKKYSKSFRKMISLCLQKDPSKRPTAEEL 261
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 1e-05
Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 5/128 (3%)
Query: 25 RALYHDLNAYRILFDEDGNPRLSTFGL---MKNSRDGKSYSTNLAFTPPEYLRTGRVTPE 81
R +Y DL +L D+ GN R+S GL +K + K + + PE L+
Sbjct: 115 RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFS 174
Query: 82 SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 141
++ G L ++++G P + + L+ T + ++ D E L
Sbjct: 175 VDWFALGCTLYEMIAG-RSPFRQRKEKVEKEELKRRTLE-MAVEYPDKFSPEAKDLCEAL 232
Query: 142 LQYEPRER 149
LQ +P +R
Sbjct: 233 LQKDPEKR 240
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 2e-05
Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 27/165 (16%)
Query: 11 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 64
L +A+ +EY SK + ++ DL A + DE +++ FGL ++ D + YS +
Sbjct: 105 LQVAKGMEYLASK-KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAK 163
Query: 65 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-------LIRDRNLQ 115
+ + E L+T + T +S ++SFG LL +L++ + PP +D L++ R L
Sbjct: 164 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVDSFDITVYLLQGRRL- 221
Query: 116 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 160
L+ ++ D L + C +P RP LV+ +
Sbjct: 222 ------LQPEYCPD---PLYEVMLSCWHPKPEMRPTFSELVSRIE 257
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 2e-05
Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 21/162 (12%)
Query: 5 MRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN 64
M ++ + +A +EY +SK ++ DL A + +E+ N ++ FGL K +G Y
Sbjct: 113 MLVKFMTDIASGMEYLSSK-SFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQG 171
Query: 65 LAFTPP------EYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRN 113
P E L T +S ++SFG + ++ + P S D +R N
Sbjct: 172 RIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGN 231
Query: 114 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155
CL+G L L S C P++RP+ ++L
Sbjct: 232 RLKQPPDCLDG---------LYSLMSSCWLLNPKDRPSFETL 264
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 2e-05
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 21/164 (12%)
Query: 7 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 64
L + + +A +EY +S ++ DL A IL E + ++S GL + Y
Sbjct: 127 LHIAIQIAAGMEYLSSH-FFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPK 185
Query: 65 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQ 115
+ + PPE + G+ + +S I+SFG +L ++ S P ++++R R L
Sbjct: 186 SLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLL 245
Query: 116 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 159
++ C ++ L + C Q P RP K + T L
Sbjct: 246 PCSEDCPPRMYS---------LMTECWQEGPSRRPRFKDIHTRL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 3e-05
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 17 LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEY 72
L++ SKG +Y DL ++ D DG+ +++ FG+ K + G + ++ TP PE
Sbjct: 109 LQFLHSKG-IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEI 167
Query: 73 LRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD 107
L+ + T +SFG LL ++L G+ P H D
Sbjct: 168 LQGLKYTFSVDWWSFGVLLYEMLIGQ--SPFHGDD 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 44.7 bits (105), Expect = 3e-05
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 9 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 68
++ + + L+Y S+ R ++ D+ A +L E G+ +L+ FG+ D + T
Sbjct: 106 ILREILKGLDYLHSE-RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGT 164
Query: 69 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL-QMLTDSCLE 123
P PE ++ ++ I+S G ++L G+ PP+ L +R L + LE
Sbjct: 165 PFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE--PPNSDLHPMRVLFLIPKNSPPTLE 222
Query: 124 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156
GQ++ CL +PR RP K L+
Sbjct: 223 GQYS----KPFKEFVEACLNKDPRFRPTAKELL 251
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 3e-05
Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 20/150 (13%)
Query: 15 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----P 70
Q L Y +G ++ D+ A IL +DG +L+ FG+ D ++ TP P
Sbjct: 110 QGLAYLHEQG-VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAP 168
Query: 71 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----LQMLTDSCLEGQ 125
E + + S I+S G +++LL+G PP + D N +++ D
Sbjct: 169 EVIEMSGASTASDIWSLGCTVIELLTGN--PPYY------DLNPMAALFRIVQDDHPP-- 218
Query: 126 FTDDDGTELVRLASRCLQYEPRERPNPKSL 155
+ EL +C Q +P RP K L
Sbjct: 219 LPEGISPELKDFLMQCFQKDPNLRPTAKQL 248
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 3e-05
Identities = 46/169 (27%), Positives = 70/169 (41%), Gaps = 31/169 (18%)
Query: 7 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 64
L + + +A +EY +S ++ DL A L E ++S FGL SRD YS +
Sbjct: 127 LHIAIQIAAGMEYLSSH-HFVHRDLAARNCLVGEGLTVKISDFGL---SRDI--YSADYY 180
Query: 65 ---------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIR 110
+ + PPE + G+ T ES I+SFG +L ++ S P +++IR
Sbjct: 181 RVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIR 240
Query: 111 DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 159
R L + C + L C P RP K + T L
Sbjct: 241 SRQLLPCPEDC---------PARVYALMIECWNEIPARRPRFKDIHTRL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 44.0 bits (105), Expect = 4e-05
Identities = 43/156 (27%), Positives = 65/156 (41%), Gaps = 28/156 (17%)
Query: 13 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF----- 67
L AL+Y S+ + L+ D+ I +G +L FG+ K S+ +
Sbjct: 112 LCLALKYLHSR-KILHRDIKPQNIFLTSNGLVKLGDFGI------SKVLSSTVDLAKTVV 164
Query: 68 -TP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 122
TP PE + +S I+S G +L +L + KH P NL L L
Sbjct: 165 GTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKH--PFEG------ENLLELALKIL 216
Query: 123 EGQFTDDD---GTELVRLASRCLQYEPRERPNPKSL 155
+GQ+ +EL L S LQ +P ERP+ +
Sbjct: 217 KGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQI 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 4e-05
Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 12/151 (7%)
Query: 8 RVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMK--NSRDGKSYSTN 64
+ + + L Y S G H D+ IL D DG +L+ FG K + + +
Sbjct: 105 KYTRQILEGLAYLHSNGIV--HRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGS 162
Query: 65 LAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120
+ TP PE +R + I+S G ++++ +GK P S + + L + S
Sbjct: 163 VRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKP-PWSELGNPM--AALYKIGSS 219
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPN 151
+ + E +CL+ +P++RP
Sbjct: 220 GEPPEIPEHLSEEAKDFLRKCLRRDPKKRPT 250
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 4e-05
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 21/161 (13%)
Query: 10 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STN--- 64
+A+ +EY S+ R ++ DL A +L ED +++ FGL + D Y ++N
Sbjct: 140 AYQVARGMEYLESR-RCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRL 198
Query: 65 -LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGKH---IPPSHALDLIRDRNLQMLT 118
+ + PE L T +S ++SFG L+ ++ L G IP L+R+ +
Sbjct: 199 PVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHRMDKP 258
Query: 119 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 159
+C EL L C P +RP K LV AL
Sbjct: 259 SNCTH---------ELYMLMRECWHAVPTQRPTFKQLVEAL 290
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 5e-05
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 9 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 68
V L + +AL ++G ++ D+ + IL DG +LS FG +L T
Sbjct: 121 VCLAVLKALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGT 179
Query: 69 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRD 111
P PE + PE I+S G ++++++ G+ + PP A+ +IRD
Sbjct: 180 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD 230
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 6e-05
Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 25/171 (14%)
Query: 5 MRLRVVLHLAQA----LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL---MKNSRD 57
+ + ++ +A A L Y + R ++ D+ IL + G +L FG+ + NS
Sbjct: 100 IPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIA 159
Query: 58 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK------------HIPPSHA 105
T+ + PE ++ G+ T +S ++S G +++L GK P
Sbjct: 160 DTFVGTS-TYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGI 218
Query: 106 LDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156
LDL++ + +Q F +D L CL +P ERP P+ L
Sbjct: 219 LDLLQ-QIVQEPPPRLPSSDFPED----LRDFVDACLLKDPTERPTPQQLC 264
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 43.8 bits (103), Expect = 6e-05
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 11 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 64
+A+ +E+ S+ + ++ DL A IL E+ ++ FGL ++ Y
Sbjct: 181 FQVARGMEFLASR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLP 239
Query: 65 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 123
L + PE + T +S ++SFG LL ++ S G P ++ + Q L D
Sbjct: 240 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN---EEFCQRLKDGT-R 295
Query: 124 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 165
+ ++ E+ R+ C Q +P+ERP +LV L L +E
Sbjct: 296 MRAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQE 337
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 6e-05
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 8 RVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN 64
R + AQ LE+ + R +Y DL +L D DGN R+S GL +DG+S +
Sbjct: 98 RACFYTAQIISGLEHLHQR-RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKG 156
Query: 65 LAFTP----PEYLRTGRVTPESVIY-SFGTLLLDLLSGK 98
A TP PE L+ G SV Y + G L ++++ +
Sbjct: 157 YAGTPGFMAPELLQ-GEEYDFSVDYFALGVTLYEMIAAR 194
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 7e-05
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 22/187 (11%)
Query: 12 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STN----L 65
+A+ +EY S+ + ++ DL A +L ED +++ FGL ++ + Y +TN +
Sbjct: 142 QVARGMEYLASQ-KCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPV 200
Query: 66 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG-----KHIPPSHALDLIRDRNLQMLTDS 120
+ PE L T +S ++SFG LL ++ + IP L+++ + +
Sbjct: 201 KWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPAN 260
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSA 180
C EL + C P +RP K LV L + T ++ + +P
Sbjct: 261 CTH---------ELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTSTDEYLDLSVPFE- 310
Query: 181 SVSPLSP 187
SP P
Sbjct: 311 QYSPGCP 317
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 7e-05
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 23/136 (16%)
Query: 27 LYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVT 79
++ DL A IL E +++ FGL + +R+G + + +T PE + G T
Sbjct: 124 IHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFT 181
Query: 80 PESVIYSFGTLLLDLLSGKHIP-PSHA-LDLIR--DRNLQM-LTDSCLEGQFTDDDGTEL 134
+S ++SFG LL ++++ IP P ++I+ +R +M D+C E EL
Sbjct: 182 IKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPE---------EL 232
Query: 135 VRLASRCLQYEPRERP 150
L C + +P ERP
Sbjct: 233 YELMRLCWKEKPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 8e-05
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 24/160 (15%)
Query: 12 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTN 64
+A+ + + + ++ DL A IL +++ FGL + +R+G +
Sbjct: 110 QIAEGMAF-IEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP-- 166
Query: 65 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHA-LDLIR--DRNLQM-LTD 119
+ +T PE + G T +S ++SFG LL+++++ IP P + ++IR +R +M +
Sbjct: 167 IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPE 226
Query: 120 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 159
+C E EL + RC + P ERP + + + L
Sbjct: 227 NCPE---------ELYNIMMRCWKNRPEERPTFEYIQSVL 257
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 8e-05
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 18/156 (11%)
Query: 9 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 68
++ + + L+Y S+ + ++ D+ A +L E G +L+ FG+ D + T
Sbjct: 106 ILREILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGT 164
Query: 69 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDS 120
P PE ++ ++ I+S G ++L G+ + P L LI N
Sbjct: 165 PFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNN-----PP 219
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156
LEG ++ L CL EP RP K L+
Sbjct: 220 TLEGNYS----KPLKEFVEACLNKEPSFRPTAKELL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 9e-05
Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 18/167 (10%)
Query: 7 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--- 63
L+ + + + ++Y S+ + ++ DL A +L + + ++ FGL K K Y T
Sbjct: 112 LKYAVQICKGMDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKD 170
Query: 64 ----NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHIPPSHALDLIRDRNLQM 116
+ + PE L + S ++SFG L +LL+ + P + L +I + QM
Sbjct: 171 DLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQM 230
Query: 117 ----LTDSCLEGQ---FTDDDGTELVRLASRCLQYEPRERPNPKSLV 156
L EG+ + E+ +L +C +++P +R ++L+
Sbjct: 231 TVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLI 277
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 1e-04
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 16 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDGKSYSTNLAFTP----P 70
AL + KG +Y DL +L D +G+ +L+ FG+ K +GK+ ST TP P
Sbjct: 108 ALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTST-FCGTPDYIAP 165
Query: 71 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 101
E L+ P ++ G LL ++L G H P
Sbjct: 166 EILQEMLYGPSVDWWAMGVLLYEMLCG-HAP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 4 AMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 63
L + + +A+EY S G ++ DL A L ED ++S FGL + D + S+
Sbjct: 100 EWLLDMCSDVCEAMEYLESNG-FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSS 158
Query: 64 N-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 118
+ + PPE R + +S ++SFG L+ ++ S +P R N +++
Sbjct: 159 QGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYE------RFSNSEVV- 211
Query: 119 DSCLEGQFTDDD---GTELVRLASRCLQYEPRERPNPKSLVTAL 159
+S G TE+ + C +P +RP K L++ L
Sbjct: 212 ESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 2e-04
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 16 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PE 71
L++ KG +Y DL +L D+DG+ +++ FG+ K + +G+ ++ TP PE
Sbjct: 108 GLQFLHKKG-IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPE 166
Query: 72 YLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALD 107
L+ G+ ESV +SFG LL ++L G+ P H D
Sbjct: 167 ILK-GQKYNESVDWWSFGVLLYEMLIGQ--SPFHGED 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 28/120 (23%)
Query: 16 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRT 75
ALEY SK +Y DL IL D++G+ +L+ FG K RD ++++ L T PEYL
Sbjct: 113 ALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRD-RTWT--LCGT-PEYL-- 165
Query: 76 GRVTPESV----------IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 125
PE + ++ G L+ ++L G PP D N + + L G+
Sbjct: 166 ---APEVIQSKGHNKAVDWWALGILIYEMLVG--YPP------FFDDNPFGIYEKILAGK 214
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 2e-04
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 11/100 (11%)
Query: 10 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGK------ 59
V + + L Y ++G ++ D+ IL D G ++S FG+ K NS K
Sbjct: 112 VRQILKGLNYLHNRG-IIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARP 170
Query: 60 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH 99
S ++ + PE ++ T ++ I+S G L++++L+GKH
Sbjct: 171 SLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKH 210
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 3e-04
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 10/147 (6%)
Query: 8 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYSTNL 65
+V + + + L Y K + ++ D+ IL + G +L FG+ D S+
Sbjct: 107 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 166
Query: 66 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH-IPPSHALDLIRDRNLQMLTDSCLEG 124
++ PE L+ + +S I+S G L+++ G++ IPP A + L+++ +EG
Sbjct: 167 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDA------KELELMFGCPVEG 220
Query: 125 QFTDDDGTELVRLASRCL-QYEPRERP 150
+ + + R R L Y P RP
Sbjct: 221 DPAESETSPRPRPPGRPLSSYGPDSRP 247
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 4e-04
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 14/98 (14%)
Query: 69 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP---PSH--ALDLIRDRNLQMLTDSCLE 123
PE L+ G T +S ++SFG +L ++ + P S+ L + D L ++C +
Sbjct: 189 APESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDLPENCPD 248
Query: 124 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 161
+L+ L C QY P+ RP +V++L
Sbjct: 249 ---------KLLELMRMCWQYNPKMRPTFLEIVSSLKD 277
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 41.2 bits (96), Expect = 4e-04
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 23/136 (16%)
Query: 27 LYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVT 79
++ DL A IL ++ +++ FGL + +R G + + +T PE GR T
Sbjct: 124 IHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 181
Query: 80 PESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 134
+S ++SFG LL +L++ +P L+ + +R +M C +G + EL
Sbjct: 182 IKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQV-ERGYRM---PCPQG--CPESLHEL 235
Query: 135 VRLASRCLQYEPRERP 150
++L C + +P ERP
Sbjct: 236 MKL---CWKKDPDERP 248
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 41.2 bits (96), Expect = 4e-04
Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 21/159 (13%)
Query: 12 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STN----L 65
+A+ +EY SK + ++ DL A +L ED +++ FGL ++ Y +TN +
Sbjct: 148 QVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 206
Query: 66 AFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGKHIPPSHALDLIRDRNLQMLTDSCLE 123
+ PE L T +S ++SFG LL ++ L G P +L + +L E
Sbjct: 207 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK-----LLK----E 257
Query: 124 GQFTDDDGT---ELVRLASRCLQYEPRERPNPKSLVTAL 159
G D EL + C P +RP K LV L
Sbjct: 258 GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 296
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.0 bits (97), Expect = 4e-04
Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 15/109 (13%)
Query: 13 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK--NSRDGKSYSTNLAFT-- 68
L + L+Y S G L+ D+ IL + DG +L+ FGL + R+ Y TN T
Sbjct: 109 LLEGLQYLHSNG-ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADY-TNRVITLW 166
Query: 69 --PPEYLRTG--RVTPESVIYSFGTLLLDLLSGKHIPP----SHALDLI 109
PPE L G R PE ++S G +L +L GK I L+ I
Sbjct: 167 YRPPELL-LGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKI 214
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 4e-04
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 13 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP--- 69
+A AL Y S +Y DL IL D G+ L+ FGL K + ++ TP
Sbjct: 105 IASALGYLHSL-NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYL 163
Query: 70 -PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD 107
PE LR + G +L ++L G +PP ++ D
Sbjct: 164 APEVLRKQPYDRTVDWWCLGAVLYEMLYG--LPPFYSRD 200
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 4e-04
Identities = 39/163 (23%), Positives = 75/163 (46%), Gaps = 24/163 (14%)
Query: 8 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL---MKNSRDGKSYSTN 64
R+ + + + L Y S + L+ D+ +L + G +L FG+ + NS K+Y
Sbjct: 99 RIAVAVVKGLTYLWSL-KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI-AKTYVGT 156
Query: 65 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK-----------HIPPSHALDLIRDRN 113
A+ PE + + S ++S G ++L G+ + P L I D +
Sbjct: 157 NAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED 216
Query: 114 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156
+L GQF++ + V ++C++ +P+ERP P++L+
Sbjct: 217 PPVLPV----GQFSE----KFVHFITQCMRKQPKERPAPENLM 251
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 5e-04
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 27 LYHDLNAYRILFDEDGNPRLSTFGLMK-----NSRDGKSYSTNLAFTPPEYLRTGRVTPE 81
+Y D+ IL D +G+ L+ FGL K S+ + + PE +R G +
Sbjct: 127 IYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHD 186
Query: 82 SVI--YSFGTLLLDLLSG 97
+ +S G L +LL+G
Sbjct: 187 KAVDWWSLGVLTFELLTG 204
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 6e-04
Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 16/147 (10%)
Query: 17 LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEY 72
L + SK + L+ D+ + + D N ++ G+ K D +++ + TP PE
Sbjct: 114 LAHLHSK-KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPEL 172
Query: 73 LRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG- 131
+S +++ G +L + +GKH P A N L + G F
Sbjct: 173 CEDKPYNEKSDVWALGVVLYECCTGKH--PFDA------NNQGALILKIIRGVFPPVSQM 224
Query: 132 --TELVRLASRCLQYEPRERPNPKSLV 156
+L +L +CL + R+RP+ L+
Sbjct: 225 YSQQLAQLIDQCLTKDYRQRPDTFQLL 251
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 8e-04
Identities = 36/160 (22%), Positives = 71/160 (44%), Gaps = 9/160 (5%)
Query: 6 RLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN- 64
++ + +A +++ S R ++ DL A L ++S L K+ + + Y
Sbjct: 119 KVALCTQIALGMDH-LSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRN 177
Query: 65 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120
L + PE ++ + +S ++SFG L+ ++ + +P L + L L
Sbjct: 178 ALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFY---GLSDEEVLNRLQAG 234
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 160
LE + + L +L +RC P++RP+ LV+AL
Sbjct: 235 KLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 8e-04
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 15 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA------FT 68
+ L Y SKG L+ DL A +L D DG ++S FG+ K S D N++ +
Sbjct: 119 EGLAYLHSKG-ILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWM 177
Query: 69 PPEYLRTGR--VTPESVIYSFGTLLLDLLSGK 98
PE + + + + I+S G ++L++ +G+
Sbjct: 178 APEVIHSYSQGYSAKVDIWSLGCVVLEMFAGR 209
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 8e-04
Identities = 35/162 (21%), Positives = 71/162 (43%), Gaps = 21/162 (12%)
Query: 12 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------L 65
+++ ++Y ++ + ++ DL A +L E ++S FGL ++ + SY +
Sbjct: 135 QISRGMQY-LAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPV 193
Query: 66 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDS 120
+ E L T +S ++SFG LL ++++ G + I P +L++ ++
Sbjct: 194 KWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPEN 253
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 162
C E E+ L C + EP +RP + L +
Sbjct: 254 CSE---------EMYNLMLTCWKQEPDKRPTFADISKELEKM 286
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 8e-04
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 23/150 (15%)
Query: 17 LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS---RDGKSYSTNLAFTPPEYL 73
LEY + ++ D+ IL D +G +L+ FG+ K KS+ + + PE +
Sbjct: 115 LEYLHDRN-TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVI 173
Query: 74 -RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI-------RDRNLQMLTDSCLEGQ 125
+ G + I+S G +L++ +GK PP L+ + R + L + D
Sbjct: 174 AQQGGYGLAADIWSLGCTVLEMATGK--PPWSQLEGVAAVFKIGRSKELPPIPDH----- 226
Query: 126 FTDDDGTELVRLASRCLQYEPRERPNPKSL 155
D+ + + CLQ +P RP L
Sbjct: 227 -LSDEAKDFILK---CLQRDPSLRPTAAEL 252
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 9e-04
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 13/149 (8%)
Query: 15 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYSTNLAFTPPEY 72
+ L Y K + ++ D+ IL + G +L FG+ + K++ ++ PE
Sbjct: 111 KGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPER 170
Query: 73 LRTGRVTPESVIYSFGTLLLDLLSGK------HIPPSHALDLIRDRNLQMLTDSCLEGQF 126
++ + +S I+S G L++L +G+ + PP +L+ + G+F
Sbjct: 171 IQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELL-QYIVNEPPPRLPSGKF 229
Query: 127 TDDDGTELVRLASRCLQYEPRERPNPKSL 155
+ D + CL +PRERP+ K L
Sbjct: 230 SPD----FQDFVNLCLIKDPRERPSYKEL 254
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.001
Identities = 25/94 (26%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 13 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST-----NLAF 67
+ + + Y SK + ++ DL A L D+ G ++S FGL + D + S+ + +
Sbjct: 109 VCEGMAYLESK-QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRW 167
Query: 68 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 101
+PPE L + + +S +++FG L+ ++ S +P
Sbjct: 168 SPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMP 201
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.001
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 25/137 (18%)
Query: 27 LYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVT 79
++ DL A IL E+ +++ FGL + +R G + + +T PE GR T
Sbjct: 124 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 181
Query: 80 PESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDS-CLEGQFTDDDGTE 133
+S ++SFG LL +L + +P LD + +R +M C E
Sbjct: 182 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPE---------S 231
Query: 134 LVRLASRCLQYEPRERP 150
L L +C + EP ERP
Sbjct: 232 LHDLMCQCWRKEPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.001
Identities = 37/169 (21%), Positives = 66/169 (39%), Gaps = 21/169 (12%)
Query: 5 MRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN 64
L+ ++ +A +EY +++ ++ DL A + ED ++ FGL K G Y
Sbjct: 114 TLLKFMVDIALGMEYLSNR-NFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQG 172
Query: 65 LAFTPP------EYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRN 113
P E L T +S +++FG + ++ + P D +R N
Sbjct: 173 RIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGN 232
Query: 114 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 162
+ CL+ EL L C + +P++RP L L +
Sbjct: 233 RLKQPEDCLD---------ELYDLMYSCWRADPKDRPTFTKLREVLENI 272
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.001
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 7 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 66
LR VL LEY +G+ ++ D+ A IL E+G+ +L+ FG+ S
Sbjct: 104 LREVLL---GLEYLHEEGK-IHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFV 159
Query: 67 FTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLT 118
TP PE ++ ++ I+S G ++L G+ + P L LI N L
Sbjct: 160 GTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLE 219
Query: 119 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155
+ +F+ + V L CL +P+ERP+ K L
Sbjct: 220 GN----KFSKP-FKDFVSL---CLNKDPKERPSAKEL 248
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 39.7 bits (92), Expect = 0.001
Identities = 34/147 (23%), Positives = 63/147 (42%), Gaps = 12/147 (8%)
Query: 15 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----P 70
+ L+Y S+ + ++ D+ A +L E G+ +L+ FG+ D + TP P
Sbjct: 112 KGLDYLHSE-KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 170
Query: 71 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR-NLQMLTDSCLEGQFTDD 129
E ++ ++ I+S G ++L G+ PP+ + +R + L G+F+
Sbjct: 171 EVIQQSAYDSKADIWSLGITAIELAKGE--PPNSDMHPMRVLFLIPKNNPPTLTGEFSKP 228
Query: 130 DGTELVRLASRCLQYEPRERPNPKSLV 156
CL +P RP K L+
Sbjct: 229 ----FKEFIDACLNKDPSFRPTAKELL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.001
Identities = 36/158 (22%), Positives = 70/158 (44%), Gaps = 21/158 (13%)
Query: 13 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNLA 66
+A + Y + + ++ DL A + ED ++ FG+ ++ R G +
Sbjct: 128 IADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 186
Query: 67 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSC 121
+ PE L+ G T S ++SFG +L ++ + P L + + L D+C
Sbjct: 187 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKPDNC 246
Query: 122 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 159
+ F EL+R+ C QY P+ RP+ +++++
Sbjct: 247 PDMLF------ELMRM---CWQYNPKMRPSFLEIISSI 275
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.001
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 8 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYSTNL 65
+V + + + L Y K + ++ D+ IL + G +L FG+ D S+
Sbjct: 107 KVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 166
Query: 66 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH-IPPSHALDL 108
++ PE L+ + +S I+S G L++L G++ IPP A +L
Sbjct: 167 SYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKEL 210
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.001
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 9 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 68
V L + +AL Y ++G ++ D+ + IL DG +LS FG +L T
Sbjct: 123 VCLSVLRALSYLHNQG-VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGT 181
Query: 69 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRD 111
P PE + E I+S G ++++++ G+ + PP A+ IRD
Sbjct: 182 PYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRD 232
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 0.002
Identities = 38/162 (23%), Positives = 66/162 (40%), Gaps = 28/162 (17%)
Query: 9 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 68
V L + +AL + ++G ++ D+ + IL DG +LS FG +L T
Sbjct: 120 VCLAVLKALSFLHAQG-VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGT 178
Query: 69 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRD------RNL 114
P PE + E I+S G ++++++ G+ + PP A+ IRD +NL
Sbjct: 179 PYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNL 238
Query: 115 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156
++ L R L +P +R L+
Sbjct: 239 HKVS-------------PRLRSFLDRMLVRDPAQRATAAELL 267
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.002
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 5/128 (3%)
Query: 25 RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPE 81
R +Y DL IL D+ G+ R+S GL + +G K + + PE ++ R T
Sbjct: 122 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS 181
Query: 82 SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 141
++ G LL ++++G+ P I+ ++ L E ++++ + L
Sbjct: 182 PDWWALGCLLYEMIAGQS-PFQQRKKKIKREEVERLVKEVQE-EYSEKFSPDARSLCKML 239
Query: 142 LQYEPRER 149
L +P+ER
Sbjct: 240 LCKDPKER 247
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 39.3 bits (91), Expect = 0.002
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 15 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----P 70
QALE+ S + ++ D+ + IL DG+ +L+ FG +S + + TP P
Sbjct: 127 QALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 185
Query: 71 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 130
E + P+ I+S G + ++++ G+ PP + +R L + T+ E Q +
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRALYL-IATNGTPELQNPEKL 242
Query: 131 GTELVRLASRCLQYEPRERPNPKSLV 156
+RCL + +R + K L+
Sbjct: 243 SAIFRDFLNRCLDMDVEKRGSAKELL 268
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.002
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 9 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTNLAF 67
V + +AL + S + ++ DL A IL DG+ +L+ FG+ KN + T +
Sbjct: 108 VCRQMLEALNFLHSH-KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIG- 165
Query: 68 TP----PEYL--RTGRVTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIR 110
TP PE + T + P ++ I+S G L++L + PP H L+ +R
Sbjct: 166 TPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQME--PPHHELNPMR 215
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.002
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 22/169 (13%)
Query: 8 RVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST- 63
+++L+ +Q +EY SK R ++ DL IL + + ++ FGL K K Y
Sbjct: 109 KLLLYASQICKGMEYLGSK-RYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKV 167
Query: 64 ------NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI---PPSHALDLI-RDRN 113
+ + PE L + + S ++SFG +L +L + PP+ + ++ D+
Sbjct: 168 REPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQ 227
Query: 114 LQMLTDSCLE-----GQFTDDDG--TELVRLASRCLQYEPRERPNPKSL 155
QM+ +E G+ G E+ + C +P +RP+ L
Sbjct: 228 GQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSEL 276
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.002
Identities = 40/167 (23%), Positives = 68/167 (40%), Gaps = 24/167 (14%)
Query: 7 LRVVLHLAQALEYCTSK--------GRALY---HDLNAYRILFDEDGNPRLSTFGLMKNS 55
L V LA AL Y K G+ + + LN + F + +P + L +
Sbjct: 104 LDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREE 163
Query: 56 RDGKSYSTNLAFTPPEYLRTGRVTPESV--IYSFGTLLLDLLSGKHIPPSHALDLIRDRN 113
R + + PE +R G+ + +SFGT LL++ S P S L
Sbjct: 164 RVERI-----PWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLS---TLSSSEK 215
Query: 114 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 160
+ D + D EL L ++C Y+P +RP+ ++++ L+
Sbjct: 216 ERFYQDQH---RLPMPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 38.8 bits (90), Expect = 0.002
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 23/165 (13%)
Query: 7 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 66
+R ++ +A +EY +SK ++ DL A + +E+ ++ FGL K G Y A
Sbjct: 116 VRFMIDIASGMEYLSSKN-FIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCA 174
Query: 67 FTPP------EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD------LIRDRNL 114
P E L T S +++FG + ++++ P + + LI+ L
Sbjct: 175 SKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRL 234
Query: 115 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 159
+ D CLE ++ L +C EP+ RP+ + L L
Sbjct: 235 KQPPD-CLE---------DVYELMCQCWSPEPKCRPSFQHLRDQL 269
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 39.1 bits (91), Expect = 0.002
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 34/173 (19%)
Query: 11 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPP 70
+A+ +E+ S+ + ++ DL A IL E+ ++ FGL +RD + P
Sbjct: 180 FQVARGMEFLASR-KCIHRDLAARNILLSENNVVKICDFGL---ARD--------IYKDP 227
Query: 71 EYLRTGR-------VTPESV----------IYSFGTLLLDLLS-GKHIPPSHALDLIRDR 112
+Y+R G + PES+ ++SFG LL ++ S G P +D R
Sbjct: 228 DYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCR 287
Query: 113 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 165
L+ T T E+ + C P +RP LV L L +E
Sbjct: 288 RLKEGTRMRAPEYATP----EIYSIMLDCWHNNPEDRPTFSELVEILGDLLQE 336
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 38.6 bits (90), Expect = 0.002
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 21/158 (13%)
Query: 13 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTNLAF--T 68
+A+ + Y + +++ DL A IL ED +++ FGL + ++ S + + T
Sbjct: 113 VAEGMAYLEEQ-NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWT 171
Query: 69 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQM-LTDSCL 122
PE G + +S ++SFG LL ++ + +P D I +M C
Sbjct: 172 APEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQI-TAGYRMPCPAKCP 230
Query: 123 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 160
+ E+ ++ C EP +RP+ K+L L
Sbjct: 231 Q---------EIYKIMLECWAAEPEDRPSFKALREELD 259
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 38.8 bits (90), Expect = 0.003
Identities = 36/158 (22%), Positives = 62/158 (39%), Gaps = 21/158 (13%)
Query: 13 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNLA 66
+A + Y +K + ++ DL A + D ++ FG+ ++ R G +
Sbjct: 128 IADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 186
Query: 67 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSC 121
+ PE L+ G T S ++SFG +L ++ S P L + D D+C
Sbjct: 187 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 246
Query: 122 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 159
E + L C Q+ P+ RP +V L
Sbjct: 247 PE---------RVTDLMRMCWQFNPKMRPTFLEIVNLL 275
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 38.6 bits (90), Expect = 0.003
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 13 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK--NSRDGKSYSTN----LA 66
L + L YC K L+ D+ IL + G +L+ FGL + NS + + Y TN L
Sbjct: 125 LLEGLNYCHKKN-FLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPY-TNKVITLW 182
Query: 67 FTPPEYLR-TGRVTPESVIYSFGTLLLDLLSGKHI 100
+ PPE L R P ++S G +L +L + K I
Sbjct: 183 YRPPELLLGEERYGPAIDVWSCGCILGELFTKKPI 217
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 0.003
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 16 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTP----P 70
L++ +G +Y DL +L D +G+ +++ FG+ K G + ST TP P
Sbjct: 108 GLQFLHERG-IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTST-FCGTPDYIAP 165
Query: 71 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD 107
E L P ++ G LL ++L+G+ P D
Sbjct: 166 EILSYQPYGPAVDWWALGVLLYEMLAGQ--SPFEGDD 200
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 38.5 bits (89), Expect = 0.003
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 21/159 (13%)
Query: 12 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK--NSRDGKSYSTN----L 65
+A+ +EY S+ + ++ DL A +L E+ +++ FGL + N+ D +TN +
Sbjct: 145 QVARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPV 203
Query: 66 AFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNLQMLTDS 120
+ PE L T +S ++SFG L+ ++ L G IP L+++ + +
Sbjct: 204 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPAN 263
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 159
C EL + C P RP K LV L
Sbjct: 264 CT---------NELYMMMRDCWHAIPSHRPTFKQLVEDL 293
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 38.2 bits (89), Expect = 0.003
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 16 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRT 75
+E +G ++ D+ +L D+ G+ +L+ FGL +N + K + + PE +
Sbjct: 109 GVEDLHQRG-IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLAPETILG 167
Query: 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHA 105
S +S G ++ + L G PP HA
Sbjct: 168 VGDDKMSDWWSLGCVIFEFLFG--YPPFHA 195
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 38.2 bits (89), Expect = 0.003
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 12/147 (8%)
Query: 9 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 68
++ + AL+Y G ++ D+ A IL GN +L FG+ S + T
Sbjct: 106 IIREVLVALKYIHKVG-VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGT 164
Query: 69 P----PEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE 123
P PE + G+ I+S G + ++ +G PP +D R ML
Sbjct: 165 PYWMAPEVITEGKYYDTKADIWSLGITIYEMATGN--PPYSDVDAFR---AMMLIPKSKP 219
Query: 124 GQFTDDDGTELVR-LASRCLQYEPRER 149
+ D+ ++L+R + CL EP+ER
Sbjct: 220 PRLEDNGYSKLLREFVAACLDEEPKER 246
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 0.004
Identities = 33/141 (23%), Positives = 55/141 (39%), Gaps = 9/141 (6%)
Query: 13 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTP 69
+ ALEY SKG ++ D+ IL DE G+ ++ F + S S +
Sbjct: 109 IVLALEYLHSKG-IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMA 167
Query: 70 PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD-RNLQMLTDSCLEGQFTD 128
PE L + +S G + L GK H+ + R Q D +
Sbjct: 168 PEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADV----LYPA 223
Query: 129 DDGTELVRLASRCLQYEPRER 149
TE + ++ L+ +P++R
Sbjct: 224 TWSTEAIDAINKLLERDPQKR 244
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 38.2 bits (89), Expect = 0.004
Identities = 45/195 (23%), Positives = 74/195 (37%), Gaps = 54/195 (27%)
Query: 8 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL-------MKNSRDG-K 59
++ + + + L Y K + ++ D+ IL + G +L FG+ M NS G +
Sbjct: 103 KISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 162
Query: 60 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH-IPP---------------- 102
SY + PE L+ T +S I+S G L+++ G++ IPP
Sbjct: 163 SYMS------PERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSE 216
Query: 103 -----------SHALDLIRDRNLQMLTDSCLE--------GQFTDDDGTELVRLASRCLQ 143
H D R + L D + G F+D E +CL+
Sbjct: 217 GEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSD----EFQDFVDKCLK 272
Query: 144 YEPRERPNPKSLVTA 158
P+ER + K L
Sbjct: 273 KNPKERADLKELTKH 287
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 38.1 bits (88), Expect = 0.004
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 15/132 (11%)
Query: 27 LYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVT 79
++ DL + IL + +++ FGL + +R G + + +T PE GR T
Sbjct: 124 IHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 181
Query: 80 PESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 138
+S ++SFG LL +L++ +P P + +R + + D L L
Sbjct: 182 IKSDVWSFGILLTELVTKGRVPYPG-----MNNREVLEQVERGYRMPCPQDCPISLHELM 236
Query: 139 SRCLQYEPRERP 150
+C + +P ERP
Sbjct: 237 LQCWKKDPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 38.1 bits (88), Expect = 0.004
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 12 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTN 64
+A+ + Y K ++ DL A +L E +++ FGL + +R+G +
Sbjct: 111 QIAEGMAYIERKNY-IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP-- 167
Query: 65 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 101
+ +T PE + G T +S ++SFG LL ++++ IP
Sbjct: 168 IKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIP 204
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 340 | |||
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 99.98 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 99.97 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 99.97 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 99.97 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 99.97 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 99.97 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 99.97 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 99.97 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 99.97 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 99.97 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.97 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 99.97 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.97 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.97 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 99.97 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 99.97 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.97 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.96 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 99.96 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.96 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 99.96 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.96 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 99.96 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 99.96 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.96 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 99.96 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.96 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.96 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.96 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 99.96 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.96 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.96 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 99.96 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 99.96 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.96 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 99.96 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.96 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.96 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 99.96 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.96 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.96 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.96 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.96 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.96 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.96 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.95 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.95 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.95 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 99.95 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.95 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 99.95 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.95 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.95 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.95 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.95 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.95 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.95 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.95 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.95 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.95 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.95 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.95 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.95 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.95 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.95 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.95 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.95 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.95 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.95 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.95 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.95 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.95 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.95 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.95 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 99.95 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.95 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.95 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.95 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.95 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.95 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.95 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.95 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.95 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.95 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 99.95 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.95 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.95 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.95 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.95 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 99.95 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.95 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.95 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.95 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.95 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.95 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.95 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.95 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.95 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.95 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.95 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.95 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.95 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.95 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.95 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.95 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.95 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.95 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.95 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.95 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.95 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.95 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.95 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.95 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.95 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.95 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.95 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.95 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.95 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.95 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.95 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.95 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.95 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.95 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.95 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.95 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.94 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.94 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.94 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.94 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.94 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.94 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.94 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.94 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.94 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.94 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.94 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.94 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.94 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.94 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.94 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.94 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.94 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.94 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.94 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.94 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.94 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.94 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.94 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.94 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.94 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.94 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.94 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.94 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.94 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.94 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.94 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.94 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.94 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.94 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.94 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.94 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.94 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.94 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 99.94 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.94 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.94 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.94 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.94 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.94 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.94 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.94 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.94 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.94 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.94 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.94 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.94 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.94 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.94 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.93 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.93 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.93 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.93 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.93 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.93 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.93 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.93 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.93 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.93 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.93 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.93 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.93 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.93 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.93 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.93 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.93 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.93 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.93 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.93 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.93 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.93 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.93 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.93 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.93 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.93 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.93 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.93 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.93 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.93 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.93 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.93 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.93 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.93 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.93 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.93 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.93 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.93 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.93 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.93 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.93 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.93 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.93 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.93 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.93 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.93 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.93 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.93 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.93 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.93 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.93 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.93 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.93 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.93 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.93 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.93 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.93 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.93 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.92 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.92 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.92 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.92 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.92 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.92 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.92 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.92 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 99.92 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.92 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.92 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.92 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.92 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.92 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.92 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.92 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.92 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.92 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.92 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.92 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.92 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.92 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.92 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.92 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.92 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.92 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.92 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.92 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.92 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.92 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.92 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.92 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.92 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.92 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.92 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.92 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.92 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.92 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.92 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.92 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.92 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.92 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.92 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.92 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.91 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.91 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.91 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.91 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.91 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.91 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.91 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.91 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.91 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.91 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.91 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.91 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.91 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.91 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.91 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.91 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.9 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.9 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.9 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.89 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.89 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.89 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.89 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.89 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.88 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.88 | |
| KOG0553 | 304 | consensus TPR repeat-containing protein [General f | 99.88 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.88 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.87 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.87 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.87 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.86 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.86 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.86 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.86 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.86 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.86 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.84 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.84 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.83 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.83 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.8 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.8 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.79 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.78 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.75 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.75 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.73 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.73 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.72 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.71 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.7 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.7 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.7 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.69 | |
| KOG4234 | 271 | consensus TPR repeat-containing protein [General f | 99.68 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.67 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.66 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.66 | |
| PLN03088 | 356 | SGT1, suppressor of G2 allele of SKP1; Provisional | 99.65 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.65 | |
| KOG0543 | 397 | consensus FKBP-type peptidyl-prolyl cis-trans isom | 99.64 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.63 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.62 | |
| KOG4648 | 536 | consensus Uncharacterized conserved protein, conta | 99.6 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.59 | |
| PRK15363 | 157 | pathogenicity island 2 chaperone protein SscA; Pro | 99.58 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.57 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.55 | |
| TIGR02552 | 135 | LcrH_SycD type III secretion low calcium response | 99.54 | |
| KOG1125 | 579 | consensus TPR repeat-containing protein [General f | 99.51 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.5 | |
| KOG0545 | 329 | consensus Aryl-hydrocarbon receptor-interacting pr | 99.5 | |
| KOG0550 | 486 | consensus Molecular chaperone (DnaJ superfamily) [ | 99.5 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.49 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.48 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.44 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 99.43 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.42 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.42 | |
| KOG0551 | 390 | consensus Hsp90 co-chaperone CNS1 (contains TPR re | 99.41 | |
| KOG4642 | 284 | consensus Chaperone-dependent E3 ubiquitin protein | 99.38 | |
| PF12895 | 84 | Apc3: Anaphase-promoting complex, cyclosome, subun | 99.38 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.38 | |
| TIGR02795 | 119 | tol_pal_ybgF tol-pal system protein YbgF. Members | 99.37 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.37 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.35 | |
| cd00189 | 100 | TPR Tetratricopeptide repeat domain; typically con | 99.35 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.35 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.32 | |
| PRK02603 | 172 | photosystem I assembly protein Ycf3; Provisional | 99.32 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.31 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.31 | |
| KOG0624 | 504 | consensus dsRNA-activated protein kinase inhibitor | 99.3 | |
| PLN02789 | 320 | farnesyltranstransferase | 99.29 | |
| CHL00033 | 168 | ycf3 photosystem I assembly protein Ycf3 | 99.28 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.27 | |
| PRK09782 | 987 | bacteriophage N4 receptor, outer membrane subunit; | 99.27 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.26 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.26 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.25 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.24 | |
| PRK15331 | 165 | chaperone protein SicA; Provisional | 99.23 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.22 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.2 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.2 | |
| TIGR03302 | 235 | OM_YfiO outer membrane assembly lipoprotein YfiO. | 99.19 | |
| KOG4555 | 175 | consensus TPR repeat-containing protein [Function | 99.18 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.16 | |
| PRK10803 | 263 | tol-pal system protein YbgF; Provisional | 99.16 | |
| TIGR02521 | 234 | type_IV_pilW type IV pilus biogenesis/stability pr | 99.15 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.14 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.14 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.14 | |
| KOG0624 | 504 | consensus dsRNA-activated protein kinase inhibitor | 99.14 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.13 | |
| KOG1308 | 377 | consensus Hsp70-interacting protein Hip/Transient | 99.12 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.12 | |
| KOG1155 | 559 | consensus Anaphase-promoting complex (APC), Cdc23 | 99.11 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.1 | |
| PLN02789 | 320 | farnesyltranstransferase | 99.1 | |
| PRK09782 | 987 | bacteriophage N4 receptor, outer membrane subunit; | 99.09 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.08 | |
| PRK15174 | 656 | Vi polysaccharide export protein VexE; Provisional | 99.07 | |
| PRK15174 | 656 | Vi polysaccharide export protein VexE; Provisional | 99.07 | |
| TIGR02521 | 234 | type_IV_pilW type IV pilus biogenesis/stability pr | 99.07 | |
| TIGR02552 | 135 | LcrH_SycD type III secretion low calcium response | 99.05 | |
| PF13429 | 280 | TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2 | 99.04 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.03 | |
| COG4235 | 287 | Cytochrome c biogenesis factor [Posttranslational | 99.03 | |
| COG5010 | 257 | TadD Flp pilus assembly protein TadD, contains TPR | 99.02 | |
| KOG2076 | 895 | consensus RNA polymerase III transcription factor | 99.02 | |
| PF13371 | 73 | TPR_9: Tetratricopeptide repeat | 99.02 | |
| KOG4162 | 799 | consensus Predicted calmodulin-binding protein [Si | 99.0 | |
| PRK10049 | 765 | pgaA outer membrane protein PgaA; Provisional | 99.0 | |
| PF13512 | 142 | TPR_18: Tetratricopeptide repeat | 99.0 | |
| PLN03098 | 453 | LPA1 LOW PSII ACCUMULATION1; Provisional | 99.0 | |
| KOG1155 | 559 | consensus Anaphase-promoting complex (APC), Cdc23 | 98.98 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 98.97 | |
| PRK11447 | 1157 | cellulose synthase subunit BcsC; Provisional | 98.97 | |
| KOG1125 | 579 | consensus TPR repeat-containing protein [General f | 98.96 | |
| PF13371 | 73 | TPR_9: Tetratricopeptide repeat | 98.96 |
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=264.00 Aligned_cols=163 Identities=27% Similarity=0.431 Sum_probs=138.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC-CeEEeccCCCccCCCC----CccccCCcccCccccc-
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLR- 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~-~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~- 74 (340)
|+|..+++|+.||+.||.|||++++||||||||+|||++.++ ++||+|||+++..... +...||+.|||||++.
T Consensus 139 l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~ 218 (362)
T KOG0192|consen 139 LPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRG 218 (362)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccccCCCCCccccChhhhcC
Confidence 689999999999999999999998789999999999999998 9999999999876532 2357899999999999
Q ss_pred -CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 -TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 -~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
...++.++|||||||++|||+||+.||.............. ...++.+|..+++.+..+|.+||+.||.+||++.
T Consensus 219 ~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~----~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ 294 (362)
T KOG0192|consen 219 EKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVV----GGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFL 294 (362)
T ss_pred CCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh----cCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHH
Confidence 56899999999999999999999999987654333222222 2334456666889999999999999999999999
Q ss_pred HHHHHhcccccCCC
Q 019495 154 SLVTALSPLQKETE 167 (340)
Q Consensus 154 ~i~~~L~~~~~~~~ 167 (340)
+|+..|+.+.....
T Consensus 295 ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 295 EIVSRLESIMSHIS 308 (362)
T ss_pred HHHHHHHHHHHhhc
Confidence 99999998876543
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-36 Score=256.24 Aligned_cols=155 Identities=20% Similarity=0.339 Sum_probs=125.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--CccccCCcccCcccccCCCCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTGRVT 79 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~ 79 (340)
++...-+|+.+|++||.|||+..+||||||||+|||++..|.|||||||.++...+. .+++||..|||||-++++.|+
T Consensus 176 ~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys 255 (364)
T KOG0581|consen 176 PEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFVGTSAYMSPERISGESYS 255 (364)
T ss_pred CHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhcccccccccccChhhhcCCcCC
Confidence 455666899999999999997433999999999999999999999999999876554 578999999999999999999
Q ss_pred CCcceehHHHHHHHHhhCCCCCCcchhHHHhhhh-hccccccccCCCCCch-hHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 80 PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-LQMLTDSCLEGQFTDD-DGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 80 ~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.++||||||++++|+++|+.|++.........-. +..+.+ ..++..|.. ++++++.++..||++||..||++.+++.
T Consensus 256 ~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~-~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 256 VKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD-EPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred cccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc-CCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 9999999999999999999988764111111111 111111 123345554 7899999999999999999999999985
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.8e-32 Score=243.78 Aligned_cols=164 Identities=34% Similarity=0.615 Sum_probs=137.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--CccccCCCCCCEEecCCCCeEEeccCCCccCCC-CCcc----ccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKG--RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-GKSY----STNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~--~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~-~~~~----~~~~~y~aPE~~ 73 (340)
|+|.+|++|+.+++.||+|||+.. +|||||||++|||+|+++.+||+|||+++.... .... .||.+|++||++
T Consensus 171 L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~ 250 (361)
T KOG1187|consen 171 LDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYA 250 (361)
T ss_pred CCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccceeeecCCCCccCChhhh
Confidence 689999999999999999999965 599999999999999999999999999987664 3322 789999999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcc-----------hhHHHhhhhhccccccccC-CCCCc-hhHHHHHHHHHH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSH-----------ALDLIRDRNLQMLTDSCLE-GQFTD-DDGTELVRLASR 140 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~-----------~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~l~~li~~ 140 (340)
..+..+.++|||||||++.||+||+.+.... ....+....+.++.|+.+. ..++. .....+..+..+
T Consensus 251 ~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~ 330 (361)
T KOG1187|consen 251 STGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALR 330 (361)
T ss_pred ccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHH
Confidence 9899999999999999999999999654321 1233444467777888766 45554 466779999999
Q ss_pred hhccCCCCCCCHHHHHHHhccccc
Q 019495 141 CLQYEPRERPNPKSLVTALSPLQK 164 (340)
Q Consensus 141 cl~~~p~~Rps~~~i~~~L~~~~~ 164 (340)
|++.+|..||+|.+|+..|+.+..
T Consensus 331 C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 331 CLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred HcCcCCCcCcCHHHHHHHHHhhcc
Confidence 999999999999999999965543
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-32 Score=242.19 Aligned_cols=158 Identities=26% Similarity=0.398 Sum_probs=130.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCcc--cc---CCcccCcccccCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--ST---NLAFTPPEYLRTG 76 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~--~~---~~~y~aPE~~~~~ 76 (340)
.-.+-+.++.|||+||+||++++ +|||||..+||||+++..+||+|||+++...++... .+ ...|+|||.+..+
T Consensus 301 ~~~~Ll~~a~qIaeGM~YLes~~-~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~ 379 (468)
T KOG0197|consen 301 NLPQLLDFAAQIAEGMAYLESKN-YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYG 379 (468)
T ss_pred chHHHHHHHHHHHHHHHHHHhCC-ccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhC
Confidence 34567899999999999999999 999999999999999999999999999966555322 11 3569999999999
Q ss_pred CCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i 155 (340)
.++.+||||||||+||||+| |+.|+++.... .+........+-..|..|+..+.+||..||..+|++||||..+
T Consensus 380 ~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~-----ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L 454 (468)
T KOG0197|consen 380 KFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE-----EVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETL 454 (468)
T ss_pred CcccccceeehhhhHHHHhccCCCCCCCCCHH-----HHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHH
Confidence 99999999999999999999 55555554332 2333334445556688899999999999999999999999999
Q ss_pred HHHhcccccC
Q 019495 156 VTALSPLQKE 165 (340)
Q Consensus 156 ~~~L~~~~~~ 165 (340)
...|+.+...
T Consensus 455 ~~~l~~~~~~ 464 (468)
T KOG0197|consen 455 REVLEDFFTS 464 (468)
T ss_pred HHHHHHhhhc
Confidence 9888877544
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=242.99 Aligned_cols=150 Identities=20% Similarity=0.291 Sum_probs=128.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
|++.++..+++||+.||.|||+.+ |||||||..|++++++.+|||+|||+|...... .+.+|||.|.|||++...
T Consensus 115 ltEpEary~l~QIv~GlkYLH~~~-IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~ 193 (592)
T KOG0575|consen 115 LTEPEARYFLRQIVEGLKYLHSLG-IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKS 193 (592)
T ss_pred CCcHHHHHHHHHHHHHHHHHHhcC-ceecccchhheeecCcCcEEecccceeeeecCcccccceecCCCcccChhHhccC
Confidence 467788899999999999999999 999999999999999999999999999876633 467999999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
..+..+||||+|||+|.|+.|++||.......+....... .-..|...+.+..+||.++|+.||.+|||+++|+
T Consensus 194 gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~------~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL 267 (592)
T KOG0575|consen 194 GHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLN------EYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVL 267 (592)
T ss_pred CCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhc------CcccccccCHHHHHHHHHHhcCCcccCCCHHHHh
Confidence 8999999999999999999999999776444333222111 1234556778999999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 268 ~ 268 (592)
T KOG0575|consen 268 D 268 (592)
T ss_pred c
Confidence 5
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.6e-32 Score=221.99 Aligned_cols=154 Identities=21% Similarity=0.312 Sum_probs=128.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhC---CCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSK---GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~---~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~ 73 (340)
++++++.+++.|++.||..+|++ +.|+||||||.||+++.+|.|||.|||+++.....+ +.+|||.||+||.+
T Consensus 121 ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i 200 (375)
T KOG0591|consen 121 IPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERI 200 (375)
T ss_pred CchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHH
Confidence 46789999999999999999994 239999999999999999999999999999877664 56899999999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCC-chhHHHHHHHHHHhhccCCCCCCCH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT-DDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.+.+|+.+|||||+||++|||+.-++||.+.....+.......- . ++.| ...+..+..||..|+..||+.||+.
T Consensus 201 ~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd----~-~~~p~~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 201 HESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGD----Y-PPLPDEHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred hcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCC----C-CCCcHHHhhhHHHHHHHHHccCCcccCCCc
Confidence 99999999999999999999999999999886655544433331 1 1223 4467899999999999999999996
Q ss_pred HHHHHHh
Q 019495 153 KSLVTAL 159 (340)
Q Consensus 153 ~~i~~~L 159 (340)
..++..+
T Consensus 276 ~~~v~di 282 (375)
T KOG0591|consen 276 VPYVQDI 282 (375)
T ss_pred chHHHHH
Confidence 5544433
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-32 Score=235.98 Aligned_cols=153 Identities=24% Similarity=0.418 Sum_probs=121.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC-CCCeEEeccCCCccCCC-------CCccccCCcccCccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRD-------GKSYSTNLAFTPPEY 72 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~-~~~~kl~dfg~~~~~~~-------~~~~~~~~~y~aPE~ 72 (340)
|++.....+..||++||.|||++| ||||||||+|||++. +|.+||+|||+++.... .....||+.|||||+
T Consensus 114 l~E~~v~~ytr~iL~GL~ylHs~g-~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEv 192 (313)
T KOG0198|consen 114 LPEPLVRRYTRQILEGLAYLHSKG-IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEV 192 (313)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchh
Confidence 567888999999999999999999 999999999999999 79999999998876542 234678999999999
Q ss_pred ccCCC-CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 73 LRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 73 ~~~~~-~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
+..+. ...++|||||||++.||+||..|+... .. .....+...... ..+.+|...+....+++.+|+..||++|||
T Consensus 193 i~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~~-~~~~~~~ig~~~-~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpt 269 (313)
T KOG0198|consen 193 IRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-FE-EAEALLLIGRED-SLPEIPDSLSDEAKDFLRKCFKRDPEKRPT 269 (313)
T ss_pred hcCCCcCCccchhhhcCCEEEeccCCCCcchhh-cc-hHHHHHHHhccC-CCCCCCcccCHHHHHHHHHHhhcCcccCcC
Confidence 98533 345999999999999999998776642 00 001111111111 223667778899999999999999999999
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.+++.
T Consensus 270 a~eLL~ 275 (313)
T KOG0198|consen 270 AEELLE 275 (313)
T ss_pred HHHHhh
Confidence 999986
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-31 Score=235.37 Aligned_cols=154 Identities=21% Similarity=0.313 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCCCCC
Q 019495 4 AMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTP 80 (340)
Q Consensus 4 ~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~ 80 (340)
...+.|..+|+.||.|||... |||||||.-||||+.+..|||+|||.++...+- .++.||..|||||+++..+++.
T Consensus 212 ~llv~Wsk~IA~GM~YLH~hK-IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsE 290 (904)
T KOG4721|consen 212 SLLVDWSKGIAGGMNYLHLHK-IIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSE 290 (904)
T ss_pred HHHHHHHHHhhhhhHHHHHhh-HhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCccc
Confidence 345789999999999999998 999999999999999999999999998865433 4678999999999999999999
Q ss_pred CcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHHHhc
Q 019495 81 ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 160 (340)
Q Consensus 81 ~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~ 160 (340)
|.||||||||||||+||..|+.+-.... .+..+-...+....|..|+..+.-|++.||+-.|.+||+|++|+..|+
T Consensus 291 KVDIwSfGVVLWEmLT~EiPYkdVdssA----IIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 291 KVDIWSFGVVLWEMLTGEIPYKDVDSSA----IIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred ccceehhHHHHHHHHhcCCCccccchhe----eEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 9999999999999999999886543322 233444455566678889999999999999999999999999998776
Q ss_pred cc
Q 019495 161 PL 162 (340)
Q Consensus 161 ~~ 162 (340)
-.
T Consensus 367 Ia 368 (904)
T KOG4721|consen 367 IA 368 (904)
T ss_pred hc
Confidence 43
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-31 Score=237.78 Aligned_cols=148 Identities=22% Similarity=0.354 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-----------------CccccCC
Q 019495 3 WAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----------------KSYSTNL 65 (340)
Q Consensus 3 ~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-----------------~~~~~~~ 65 (340)
....--++.||++||+|||+.| ||||||||+|||+|++++++|+|||.++.+.+. .+++||-
T Consensus 173 e~caR~YAAeIldAleylH~~G-IIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTA 251 (604)
T KOG0592|consen 173 ETCARFYAAEILDALEYLHSNG-IIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTA 251 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeee
Confidence 3444568999999999999999 999999999999999999999999998865421 3578999
Q ss_pred cccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccC
Q 019495 66 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 145 (340)
Q Consensus 66 ~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~ 145 (340)
.|.+||+|..+..+..+|||+||||+|.|+.|.+||.+.....+-...+.. .-.+|...++.+.+|+.+.|..|
T Consensus 252 eYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l------~y~fp~~fp~~a~dLv~KLLv~d 325 (604)
T KOG0592|consen 252 EYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQAL------DYEFPEGFPEDARDLIKKLLVRD 325 (604)
T ss_pred cccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHh------cccCCCCCCHHHHHHHHHHHccC
Confidence 999999999999999999999999999999999999776444333222221 33567777789999999999999
Q ss_pred CCCCCCHHHHHH
Q 019495 146 PRERPNPKSLVT 157 (340)
Q Consensus 146 p~~Rps~~~i~~ 157 (340)
|.+|++..+|.+
T Consensus 326 p~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 326 PSDRLTSQQIKA 337 (604)
T ss_pred ccccccHHHHhh
Confidence 999999999986
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-31 Score=223.40 Aligned_cols=155 Identities=19% Similarity=0.331 Sum_probs=121.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCC-CC---CccccCCcccCcccccC-C
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR-DG---KSYSTNLAFTPPEYLRT-G 76 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~-~~---~~~~~~~~y~aPE~~~~-~ 76 (340)
+.....++++|++.|+.|+|+++ +|||||||+||||+.+|.+|+||||+++... ++ +.++.|.+|.|||.+.+ .
T Consensus 99 ~~~~vk~~l~Q~l~ai~~cHk~n-~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDt 177 (396)
T KOG0593|consen 99 PSELVKKYLYQLLKAIHFCHKNN-CIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDT 177 (396)
T ss_pred CHHHHHHHHHHHHHHhhhhhhcC-eecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccC
Confidence 45567789999999999999999 9999999999999999999999999999876 44 34567999999999987 6
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHh--------------------hhhhccccccccCC-----CCCchhH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR--------------------DRNLQMLTDSCLEG-----QFTDDDG 131 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~-----~~~~~~~ 131 (340)
+|+...|||++||++.||++|.+.|++.+.-..- +..+..+.-|.... .--+..+
T Consensus 178 qYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s 257 (396)
T KOG0593|consen 178 QYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKIS 257 (396)
T ss_pred cCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccch
Confidence 7999999999999999999999988875221100 00111111111100 0112345
Q ss_pred HHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 132 TELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 132 ~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
..+.+++.+|+..||++|++.++++.
T Consensus 258 ~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 258 NVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred HHHHHHHHHHhcCCccccccHHHHhc
Confidence 68999999999999999999999874
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-31 Score=228.47 Aligned_cols=143 Identities=26% Similarity=0.337 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCC----CCCccccCCcccCcccccCCCC
Q 019495 3 WAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----DGKSYSTNLAFTPPEYLRTGRV 78 (340)
Q Consensus 3 ~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~----~~~~~~~~~~y~aPE~~~~~~~ 78 (340)
+....-++.+|+.||.|||+++ ||||||||+|||+|.+|+++|+|||+++... .+.+++||+.|||||++.+..+
T Consensus 124 E~~arfYlaEi~lAL~~LH~~g-IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy 202 (357)
T KOG0598|consen 124 EDRARFYLAEIVLALGYLHSKG-IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGY 202 (357)
T ss_pred hhHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHeeecCCCcEEEeccccchhcccCCCccccccCCccccChHHHhcCCC
Confidence 3445557999999999999999 9999999999999999999999999998533 2346799999999999999999
Q ss_pred CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 79 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 79 ~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
+..+|.||+|+++|||++|.+||.......+.......- ....+...+....+++++.+..||++|..
T Consensus 203 ~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k-----~~~~p~~ls~~ardll~~LL~rdp~~RLg 270 (357)
T KOG0598|consen 203 DKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK-----LPLPPGYLSEEARDLLKKLLKRDPRQRLG 270 (357)
T ss_pred CcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc-----CCCCCccCCHHHHHHHHHHhccCHHHhcC
Confidence 999999999999999999999998876555544443331 11223336688999999999999999963
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-31 Score=236.65 Aligned_cols=152 Identities=18% Similarity=0.310 Sum_probs=127.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
|++.+.-.|+++++.||.|||.++ |||||||.+|||++.+|.+||+|||++...... .+.+||+.|||||+....
T Consensus 366 ~~E~qIA~Icre~l~aL~fLH~~g-IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk 444 (550)
T KOG0578|consen 366 MTEGQIAAICREILQGLKFLHARG-IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRK 444 (550)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcc-eeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhc
Confidence 467788889999999999999999 999999999999999999999999998776544 366899999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchh-HHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i 155 (340)
.|+++.||||||++++||+.|.+||..+.. ..+.... .........+...++.+.+++.+||+.|+++|+++.|+
T Consensus 445 ~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa----~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eL 520 (550)
T KOG0578|consen 445 PYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA----TNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKEL 520 (550)
T ss_pred ccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHh----hcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHH
Confidence 999999999999999999999999875322 1111111 11122334566678999999999999999999999999
Q ss_pred HH
Q 019495 156 VT 157 (340)
Q Consensus 156 ~~ 157 (340)
++
T Consensus 521 L~ 522 (550)
T KOG0578|consen 521 LE 522 (550)
T ss_pred hc
Confidence 85
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=236.15 Aligned_cols=159 Identities=25% Similarity=0.377 Sum_probs=125.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
|++...+.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...++..|+|||++.
T Consensus 171 l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 249 (338)
T cd05102 171 LTMEDLICYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIF 249 (338)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhh
Confidence 457788999999999999999999 9999999999999999999999999987643221 223457899999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++|||||||++|||++ |..||............... ......+..++..+.+++.+||+.||++|||+.
T Consensus 250 ~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~ 325 (338)
T cd05102 250 DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKD----GTRMRAPENATPEIYRIMLACWQGDPKERPTFS 325 (338)
T ss_pred cCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhc----CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHH
Confidence 8889999999999999999997 88887653221111111111 111123445668899999999999999999999
Q ss_pred HHHHHhccccc
Q 019495 154 SLVTALSPLQK 164 (340)
Q Consensus 154 ~i~~~L~~~~~ 164 (340)
++++.|+.+..
T Consensus 326 el~~~l~~~~~ 336 (338)
T cd05102 326 ALVEILGDLLQ 336 (338)
T ss_pred HHHHHHHHHHh
Confidence 99999987643
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=231.38 Aligned_cols=148 Identities=24% Similarity=0.342 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCC---CCeEEeccCCCccCCCC---CccccCCcccCcccccCCCC--
Q 019495 7 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRV-- 78 (340)
Q Consensus 7 ~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~---~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~-- 78 (340)
--+++|++.|+.|||++| |+||||||+|||+..+ ..+||+|||+++..+.+ .+++||+.|.|||++.++..
T Consensus 279 K~~f~Qll~avkYLH~~G-I~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~ 357 (475)
T KOG0615|consen 279 KLLFKQLLTAVKYLHSQG-IIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEY 357 (475)
T ss_pred HHHHHHHHHHHHHHHHcC-cccccCCcceEEeccCCcceEEEecccchhhccccceehhhhcCCccccChhheecCCeec
Confidence 357999999999999999 9999999999999755 67999999999988755 46799999999999987543
Q ss_pred -CCCcceehHHHHHHHHhhCCCCCCcchhHH-HhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 79 -TPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 79 -~~~~Di~s~G~il~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
..+.|+||+||++|-+++|.+||.++.... +.......-. .+.+.....++.+..++|.+||..||++|||+.|++
T Consensus 358 ~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y--~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL 435 (475)
T KOG0615|consen 358 YPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRY--AFGPLQWDRISEEALDLINWMLVVDPENRPSADEAL 435 (475)
T ss_pred ccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcc--cccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHh
Confidence 347899999999999999999998765443 3222222111 122234556789999999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
+
T Consensus 436 ~ 436 (475)
T KOG0615|consen 436 N 436 (475)
T ss_pred c
Confidence 5
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=227.39 Aligned_cols=158 Identities=18% Similarity=0.221 Sum_probs=129.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhC-CCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-CccccCCcccCcccccC--C
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRT--G 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~-~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~--~ 76 (340)
++|.++++++.|++.||.|||+. + ++||||||+||+++.++.+|++|||+++..... ....++..|+|||++.+ .
T Consensus 119 ~~~~~~~~i~~~i~~~l~~lH~~~~-~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 197 (283)
T PHA02988 119 LSFKTKLDMAIDCCKGLYNLYKYTN-KPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFS 197 (283)
T ss_pred CChhHHHHHHHHHHHHHHHHHhcCC-CCCCcCChhhEEECCCCcEEEcccchHhhhccccccccCcccccCHHHhhhccc
Confidence 46888999999999999999985 6 899999999999999999999999998764433 33467889999999976 6
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++|||||||++|||++|+.||.......+....... ......+..++..+.+++.+||+.||++|||+.+++
T Consensus 198 ~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~----~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell 273 (283)
T PHA02988 198 EYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINK----NNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEIL 273 (283)
T ss_pred cccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc----CCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHH
Confidence 7899999999999999999999998765433322221111 112234446778999999999999999999999999
Q ss_pred HHhcccc
Q 019495 157 TALSPLQ 163 (340)
Q Consensus 157 ~~L~~~~ 163 (340)
..|+.+.
T Consensus 274 ~~l~~~~ 280 (283)
T PHA02988 274 YNLSLYK 280 (283)
T ss_pred HHHHHHH
Confidence 9988764
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=236.02 Aligned_cols=162 Identities=22% Similarity=0.326 Sum_probs=129.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC------CCccccCCcccCcccccC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------GKSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~ 75 (340)
+..+.+.|+.||+.||.|||.++ |||||||..||++.+++.|||.|||++...+. -....++..|||||+++.
T Consensus 486 dm~~~idIAqQiaqGM~YLHAK~-IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRm 564 (678)
T KOG0193|consen 486 DMNTTIDIAQQIAQGMDYLHAKN-IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRM 564 (678)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhh-hhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhh
Confidence 34577899999999999999999 99999999999999999999999999764321 123357889999999986
Q ss_pred C---CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 76 G---RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 76 ~---~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
+ +++..+||||||+|+|||+||..|+.....+.+-...-.....+.. ......++.++.+|+..||..++++||.+
T Consensus 565 qd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~-s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F 643 (678)
T KOG0193|consen 565 QDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDL-SKIRSNCPKAMKRLLSDCWKFDREERPLF 643 (678)
T ss_pred cccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccc-hhhhccCHHHHHHHHHHHHhcCcccCccH
Confidence 4 6899999999999999999999998755444433333222221111 12345677899999999999999999999
Q ss_pred HHHHHHhcccccC
Q 019495 153 KSLVTALSPLQKE 165 (340)
Q Consensus 153 ~~i~~~L~~~~~~ 165 (340)
.+|+..|+.+.+.
T Consensus 644 ~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 644 PQLLSKLEELLPS 656 (678)
T ss_pred HHHHHHHHHhhhc
Confidence 9999988877653
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-30 Score=225.46 Aligned_cols=156 Identities=22% Similarity=0.307 Sum_probs=121.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--------CccccCCcccCccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--------KSYSTNLAFTPPEY 72 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--------~~~~~~~~y~aPE~ 72 (340)
|++...-.|++++++||.|||.+| -||||||+.||||+.+|.|||+|||.+..+-++ .++.||+.|||||+
T Consensus 123 l~E~~Ia~iLre~LkaL~YLH~~G-~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEv 201 (516)
T KOG0582|consen 123 LEEASIATILREVLKALDYLHQNG-HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEV 201 (516)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcC-ceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHH
Confidence 355667789999999999999999 999999999999999999999999976543221 45678999999999
Q ss_pred ccC--CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccc----ccCCCCCchhHHHHHHHHHHhhccCC
Q 019495 73 LRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS----CLEGQFTDDDGTELVRLASRCLQYEP 146 (340)
Q Consensus 73 ~~~--~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~cl~~~p 146 (340)
+.. ..|+.|+||||||++..||.+|..||.......+-...+..-++. .+..+-....+..+.+++..|++.||
T Consensus 202 l~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP 281 (516)
T KOG0582|consen 202 LMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDP 281 (516)
T ss_pred hhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCc
Confidence 643 469999999999999999999999987654433333333322211 11111123346789999999999999
Q ss_pred CCCCCHHHHHH
Q 019495 147 RERPNPKSLVT 157 (340)
Q Consensus 147 ~~Rps~~~i~~ 157 (340)
.+|||+++++.
T Consensus 282 ~kRptAskLlk 292 (516)
T KOG0582|consen 282 SKRPTASKLLK 292 (516)
T ss_pred ccCCCHHHHhc
Confidence 99999999885
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-30 Score=233.09 Aligned_cols=150 Identities=17% Similarity=0.291 Sum_probs=131.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
|++.+..+++.||++|+.|+|.-+ |+||||||+|+|||..+++||+|||++..-.++ .+.+|+++|.+||+++|.+
T Consensus 109 l~e~eaa~ff~QIi~gv~yCH~~~-icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~p 187 (786)
T KOG0588|consen 109 LPEREAAHFFRQILDGVSYCHAFN-ICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRP 187 (786)
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhc-ceeccCCchhhhhhcccCEeeeccceeecccCCccccccCCCcccCCchhhcCCC
Confidence 567889999999999999999999 999999999999999999999999999876666 4679999999999999988
Q ss_pred C-CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 78 V-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 78 ~-~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
| +.++||||.|||||-|+||+.||.++....+......... +.|..+++++++|+.+|+..||..|.|+++|+
T Consensus 188 YdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f------~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~ 261 (786)
T KOG0588|consen 188 YDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVF------EMPSNISSEAQDLLRRMLDVDPSTRITTEEIL 261 (786)
T ss_pred CCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcc------cCCCcCCHHHHHHHHHHhccCccccccHHHHh
Confidence 6 6799999999999999999999998766655444433322 34567789999999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 262 k 262 (786)
T KOG0588|consen 262 K 262 (786)
T ss_pred h
Confidence 6
|
|
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=246.38 Aligned_cols=329 Identities=18% Similarity=0.153 Sum_probs=204.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----------------------C
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----------------------K 59 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----------------------~ 59 (340)
++...++++.||+.||.|||+++ |+||||||+||+++.+|.++|+|||+++..... .
T Consensus 111 sv~~iL~I~~QIa~AL~yLHs~G-IIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g 189 (932)
T PRK13184 111 SVGAFLSIFHKICATIEYVHSKG-VLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPG 189 (932)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC-ccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCC
Confidence 45677899999999999999999 999999999999999999999999998754110 1
Q ss_pred ccccCCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHH
Q 019495 60 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 139 (340)
Q Consensus 60 ~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 139 (340)
...||+.|+|||++.+..++.++|||||||++|||+||+.||.......+.... ....+. ........++.+.+++.
T Consensus 190 ~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~--~i~~P~-~~~p~~~iP~~L~~LI~ 266 (932)
T PRK13184 190 KIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRD--VILSPI-EVAPYREIPPFLSQIAM 266 (932)
T ss_pred CCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhh--hccChh-hccccccCCHHHHHHHH
Confidence 235789999999999888999999999999999999999988653322211111 111110 00111245678999999
Q ss_pred HhhccCCCCCC-CHHHHHHHhcccccCCCC--Cccc---------------c-cCC-----CCCC-----CC--------
Q 019495 140 RCLQYEPRERP-NPKSLVTALSPLQKETEV--PSHV---------------L-MGI-----PHSA-----SV-------- 182 (340)
Q Consensus 140 ~cl~~~p~~Rp-s~~~i~~~L~~~~~~~~~--~~~~---------------~-~~~-----~~~~-----~~-------- 182 (340)
+|++.||++|| +++++++.|+.+...... +... . ... .+.. ..
T Consensus 267 rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~w~~~~~l~~~~~~~wk~~e~iLlsk~~~~l~~s~~~w~s~~is~ie~~~~ 346 (932)
T PRK13184 267 KALAVDPAERYSSVQELKQDLEPHLQGSPEWTVKATLMTKKKSCWKFYEPILLSKYFPMLESSPAQWYSLMISKIESSSE 346 (932)
T ss_pred HHccCChhhCcCHHHHHHHHHHHHHhcCcccccccccccccchhccccchhhhhhhcccccCCchhheeccccccccccc
Confidence 99999999996 466677766655332110 0000 0 000 0000 00
Q ss_pred ----------------CCCCCCCCccccch-hhHHHHHHHHhccC--------Cch-------hhhhhhhhh--------
Q 019495 183 ----------------SPLSPLGEACSRRD-LTAIHEILEKISYK--------DDE-------GVANELSFQ-------- 222 (340)
Q Consensus 183 ----------------~~~~p~~~~~~~~~-~~~~~~~~~~~~~~--------~~~-------~~~~~~~~~-------- 222 (340)
....|......+.+ .....-|+...... ..+ .......|.
T Consensus 347 ~rie~~~~~~~~~~~~g~~l~p~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 426 (932)
T PRK13184 347 TRLEYTVTKKGLHEGFGILLPPSEEAERGDFYCGYGLWLHIKNNELSVSLVKNGLEIQKKSQEIISQQETFAIAIEKSNH 426 (932)
T ss_pred eeeeeeeccCccccccceecCcccccccCccccccceeeecccccceeeeecccceeecCCcccccccceeeEEEEEecc
Confidence 00000000000000 00111111000000 000 000000000
Q ss_pred ---------hh-----------------hhHHHHH--------------HHHHHHHhHHhhhcCHHHHHHHHHHHHhcCC
Q 019495 223 ---------MW-----------------TDQMQET--------------LNSKKKGDVAFRQKDLKDAIECYTQFIDAGT 262 (340)
Q Consensus 223 ---------~~-----------------~~~~~~~--------------~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p 262 (340)
-| .+.++.. .....--+++...+.|++|+..|++.-..-|
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (932)
T PRK13184 427 RISLFVDQTLWIIHIDYLPSRGGRIGIIIQDLQDIMSNIAIFESSGALRVSCLAVPDAFLAEKLYDQALIFYRRIRESFP 506 (932)
T ss_pred hhhhhcccceEEEeeeccccCCceEEEEEecchhhccceEEEEecCceeeecccCcHHHHhhHHHHHHHHHHHHHhhcCC
Confidence 00 0001111 1223345677888999999999999999988
Q ss_pred Cc--chHHhhhhHHHHHhc----C---ChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccc
Q 019495 263 MV--SPTVYARRSLCYLMS----D---MPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 333 (340)
Q Consensus 263 ~~--~~~~~~~~~~~~~~~----~---~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 333 (340)
.- ..++-++.|...+.. | .+.+|+..|++ |.-.|..+--|.++|.+|..+|+|+|-+++|.-|++.=|+.
T Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (932)
T PRK13184 507 GRKEGYEAQFRLGITLLEKASEQGDPRDFTQALSEFSY-LHGGVGAPLEYLGKALVYQRLGEYNEEIKSLLLALKRYSQH 585 (932)
T ss_pred CcccchHHHHHhhHHHHHHHHhcCChHHHHHHHHHHHH-hcCCCCCchHHHhHHHHHHHhhhHHHHHHHHHHHHHhcCCC
Confidence 72 345666777776652 2 35566666655 33457778889999999999999999999999999998887
Q ss_pred cc
Q 019495 334 NS 335 (340)
Q Consensus 334 ~~ 335 (340)
+.
T Consensus 586 ~~ 587 (932)
T PRK13184 586 PE 587 (932)
T ss_pred Cc
Confidence 65
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.3e-31 Score=228.19 Aligned_cols=147 Identities=20% Similarity=0.356 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCCCCCC
Q 019495 5 MRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTGRVTP 80 (340)
Q Consensus 5 ~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~ 80 (340)
...-++++++.||.|||+++ .||||||+.||++..+|.+||+|||++...... .++.||+.|||||++.+..|+.
T Consensus 112 ~i~~ilre~l~~l~ylH~~~-kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~ 190 (467)
T KOG0201|consen 112 EIAVILREVLKGLDYLHSEK-KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDT 190 (467)
T ss_pred eeeeehHHHHHHhhhhhhcc-eecccccccceeEeccCcEEEEecceeeeeechhhccccccccccccchhhhccccccc
Confidence 33457899999999999999 999999999999999999999999998876544 4778999999999999889999
Q ss_pred CcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 81 ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 81 ~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
++||||||++.+||++|.+|+..... ..+.-+++...++.+...+++.+.+++..||+.||+.||++.+++.
T Consensus 191 KADIWSLGITaiEla~GePP~s~~hP-----mrvlflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 191 KADIWSLGITAIELAKGEPPHSKLHP-----MRVLFLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred hhhhhhhhHHHHHHhcCCCCCcccCc-----ceEEEeccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 99999999999999999988754322 3334444555555555667889999999999999999999999874
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-30 Score=229.63 Aligned_cols=156 Identities=24% Similarity=0.331 Sum_probs=128.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCC-CCeEEeccCCCccC-CC---CCccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNS-RD---GKSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~-~~~kl~dfg~~~~~-~~---~~~~~~~~~y~aPE~~~~ 75 (340)
|.+...-.++.|+++|++|||+.| |+||||||+|||++.+ +++||+|||++... .. ..+.+||+.|+|||++.+
T Consensus 117 l~E~~ar~~F~Qlisav~y~H~~g-i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~ 195 (370)
T KOG0583|consen 117 LKEDEARKYFRQLISAVAYCHSRG-IVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSG 195 (370)
T ss_pred CChHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEecCCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCC
Confidence 345677789999999999999999 9999999999999999 99999999999876 22 246789999999999998
Q ss_pred CC-CC-CCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchh-HHHHHHHHHHhhccCCCCCCCH
Q 019495 76 GR-VT-PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD-GTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 76 ~~-~~-~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.. |+ .++||||+||+||-|++|..||.......+....... .-.+|..+ ++.+..++.+|+..||.+|+++
T Consensus 196 ~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~------~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~ 269 (370)
T KOG0583|consen 196 KGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKG------EFKIPSYLLSPEARSLIEKMLVPDPSTRITL 269 (370)
T ss_pred CCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcC------CccCCCCcCCHHHHHHHHHHcCCCcccCCCH
Confidence 66 74 7899999999999999999999876555444432222 12344455 7899999999999999999999
Q ss_pred HHHHHHhcccccC
Q 019495 153 KSLVTALSPLQKE 165 (340)
Q Consensus 153 ~~i~~~L~~~~~~ 165 (340)
.+|+ ..++...
T Consensus 270 ~~i~--~h~w~~~ 280 (370)
T KOG0583|consen 270 LEIL--EHPWFQK 280 (370)
T ss_pred HHHh--hChhhcc
Confidence 9999 4554443
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-29 Score=221.61 Aligned_cols=155 Identities=24% Similarity=0.323 Sum_probs=125.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++.+.+.++.||+.||.|||+++ ++||||||+||+++.++.++|+|||+++...... ...+++.|+|||++.
T Consensus 121 l~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 199 (283)
T cd05048 121 LDCSDFLHIAIQIAAGMEYLSSHH-FVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAIL 199 (283)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhc
Confidence 456788899999999999999999 9999999999999999999999999987643221 223467899999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
++.++.++|+|||||++|||++ |..||.......+....... .....+..++..+.+|+.+||+.||++||++.
T Consensus 200 ~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~ 274 (283)
T cd05048 200 YGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSR-----QLLPCPEDCPARVYALMIECWNEIPARRPRFK 274 (283)
T ss_pred cCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-----CcCCCcccCCHHHHHHHHHHccCChhhCcCHH
Confidence 8889999999999999999998 88887654433322211111 12234556778999999999999999999999
Q ss_pred HHHHHhcc
Q 019495 154 SLVTALSP 161 (340)
Q Consensus 154 ~i~~~L~~ 161 (340)
+|++.|+.
T Consensus 275 ~i~~~l~~ 282 (283)
T cd05048 275 DIHTRLRS 282 (283)
T ss_pred HHHHHHhc
Confidence 99998875
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=204.72 Aligned_cols=151 Identities=22% Similarity=0.310 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC---CCCeEEeccCCCccCCCCC---ccccCCcccCcccccCCC
Q 019495 4 AMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 4 ~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~---~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~~~ 77 (340)
.-.-..++||+++|.|+|.++ |||||+||.|+++.. ..-+||+|||++...+.+. .+.|||+|||||+++..+
T Consensus 110 a~aSH~~rQiLeal~yCH~n~-IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdp 188 (355)
T KOG0033|consen 110 ADASHCIQQILEALAYCHSNG-IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDP 188 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeeeeccCCCceeecccceEEEeCCccccccccCCCcccCHHHhhcCC
Confidence 344568999999999999999 999999999999953 3359999999999887554 357899999999999999
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
++..+|||+.|||||-|+.|.+||++.....+..+....-.+ ..+...+.+++...+|+++||..||.+|.|+.|.+.
T Consensus 189 y~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd--~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 189 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYD--YPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred CCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccC--CCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 999999999999999999999999987666555554443222 233345567789999999999999999999999874
|
|
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=208.44 Aligned_cols=148 Identities=22% Similarity=0.347 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc---cccCCcccCcccccC---CCCCCC
Q 019495 8 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS---YSTNLAFTPPEYLRT---GRVTPE 81 (340)
Q Consensus 8 ~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~---~~~~~~y~aPE~~~~---~~~~~~ 81 (340)
++...+++||.||.++..|||||+||+|||+|+.|++|+||||++....+... ..|.+.|||||-+.- .+|+..
T Consensus 195 k~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiR 274 (391)
T KOG0983|consen 195 KMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIR 274 (391)
T ss_pred hhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccccccccCCccccCccccCCCCCCccchh
Confidence 56778899999999987799999999999999999999999999887766543 357889999999864 368999
Q ss_pred cceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 82 SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 82 ~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+||||||++++||.||+.|+.+...+...-..+..-.++.+++ ...+++.+++++..||..|+.+||.+.++++
T Consensus 275 aDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~--~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 275 ADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPG--HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred hhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCc--ccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 9999999999999999999987433332222222111222221 2236789999999999999999999999885
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=227.38 Aligned_cols=150 Identities=19% Similarity=0.273 Sum_probs=131.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~ 76 (340)
|++..+-.|+.|+++||.|||+.+ |+|||+||.|||++..|.+|+||||+++.++..+ +..||+.|||||+..++
T Consensus 97 lpEe~v~~~a~~LVsaL~yLhs~r-ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~ 175 (808)
T KOG0597|consen 97 LPEEQVRAIAYDLVSALYYLHSNR-ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQ 175 (808)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcC-cccccCCcceeeecCCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCC
Confidence 577888999999999999999999 9999999999999999999999999999887764 34789999999999999
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
+|+..+|+||+|||+||+++|++||.......+......+ ...+|...+..+..++...+.+||.+|.+..+++
T Consensus 176 pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d------~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll 249 (808)
T KOG0597|consen 176 PYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKD------PVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLL 249 (808)
T ss_pred CccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcC------CCCCcccccHHHHHHHHHHhhcChhhcccHHHHh
Confidence 9999999999999999999999999876655554444333 2234557789999999999999999999998887
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 250 ~ 250 (808)
T KOG0597|consen 250 G 250 (808)
T ss_pred c
Confidence 4
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=227.82 Aligned_cols=150 Identities=19% Similarity=0.306 Sum_probs=123.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC----CCccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~ 76 (340)
+++.+...++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++.... .....||+.|+|||++.+.
T Consensus 92 ~~~~~~~~~~~qi~~~L~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 170 (323)
T cd05571 92 FSEDRARFYGAEIVSALGYLHSCD-VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 170 (323)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCccccChhhhcCC
Confidence 467788889999999999999999 99999999999999999999999999875322 1235689999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC-----C
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP-----N 151 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s 151 (340)
.++.++|||||||++|||++|+.||.......+....... ...++...+..+.+++.+||+.||++|| +
T Consensus 171 ~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~ 244 (323)
T cd05571 171 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPED 244 (323)
T ss_pred CCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCC
Confidence 8999999999999999999999998765443332222111 1234556678899999999999999999 7
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.+++.
T Consensus 245 ~~~ll~ 250 (323)
T cd05571 245 AKEIME 250 (323)
T ss_pred HHHHHc
Confidence 888874
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-29 Score=205.45 Aligned_cols=167 Identities=20% Similarity=0.267 Sum_probs=126.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC-
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG- 76 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~- 76 (340)
+-...-.++.++++||+|||+++ |+|||+||.|+|++.+|.+|++|||+++..+... ..+-|.+|.|||.+.|.
T Consensus 99 ~pa~iK~y~~m~LkGl~y~H~~~-IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr 177 (318)
T KOG0659|consen 99 SPADIKSYMLMTLKGLAYCHSKW-ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSR 177 (318)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhh-hhcccCCccceEEcCCCcEEeecccchhccCCCCcccccceeeeeccChHHhccch
Confidence 34556789999999999999999 9999999999999999999999999999876442 23568999999999874
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhh--------------hcccc--------ccccCCCCCchhHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN--------------LQMLT--------DSCLEGQFTDDDGTEL 134 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~--------------~~~~~--------~~~~~~~~~~~~~~~l 134 (340)
.|+...|+||.|||+.||+.|.+.|++.+.-..-... +..++ +......+-..++...
T Consensus 178 ~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ 257 (318)
T KOG0659|consen 178 QYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDA 257 (318)
T ss_pred hcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHH
Confidence 5999999999999999999999877764221111111 11111 1111111223456778
Q ss_pred HHHHHHhhccCCCCCCCHHHHHHHhcccccCCCCCcc
Q 019495 135 VRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSH 171 (340)
Q Consensus 135 ~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~~~~~~ 171 (340)
.+++.+++..||.+|+++++++. .+++...+.|.+
T Consensus 258 ldLl~~m~~ynP~~Rita~qaL~--~~yf~~~P~pt~ 292 (318)
T KOG0659|consen 258 LDLLSKMLTYNPKKRITASQALK--HPYFKSLPLPTP 292 (318)
T ss_pred HHHHHhhhccCchhcccHHHHhc--chhhhcCCCCCC
Confidence 99999999999999999999985 556555444443
|
|
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=208.60 Aligned_cols=154 Identities=20% Similarity=0.258 Sum_probs=127.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC---ccccCCcccCcccccC--
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRT-- 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~-- 75 (340)
|+++..-+|+.|+.+|++|||.++ ||||||||+|||++++-++||+|||++....++. ..+||++|+|||.+..
T Consensus 120 lSEK~tR~iMrqlfegVeylHa~~-IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m 198 (411)
T KOG0599|consen 120 LSEKETRRIMRQLFEGVEYLHARN-IVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSM 198 (411)
T ss_pred ecHHHHHHHHHHHHHHHHHHHHhh-hhhcccChhheeeccccceEEeccceeeccCCchhHHHhcCCCcccChhheeeec
Confidence 567888899999999999999999 9999999999999999999999999999988875 5689999999998863
Q ss_pred ----CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 76 ----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 76 ----~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
..|+...|+|+.|||+|.|+.|.+||+-.....+.......-. .+..+-..+.+....++|.+||+.||.+|.|
T Consensus 199 ~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGky--qF~speWadis~~~KdLIsrlLqVdp~~Rit 276 (411)
T KOG0599|consen 199 YENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKY--QFRSPEWADISATVKDLISRLLQVDPTKRIT 276 (411)
T ss_pred ccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhccc--ccCCcchhhccccHHHHHHHHHeeCchhccc
Confidence 3588899999999999999999999875433332222222111 1222334566788999999999999999999
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.|++.
T Consensus 277 ake~La 282 (411)
T KOG0599|consen 277 AKEALA 282 (411)
T ss_pred HHHHhc
Confidence 999885
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-29 Score=231.30 Aligned_cols=157 Identities=20% Similarity=0.334 Sum_probs=124.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc------cccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS------YSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~------~~~~~~y~aPE~~~ 74 (340)
+++.+.++++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++....... ..++..|+|||++.
T Consensus 209 l~~~~~~~i~~qi~~aL~yLH~~g-iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 287 (374)
T cd05106 209 LDLDDLLRFSSQVAQGMDFLASKN-CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIF 287 (374)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCC-EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhc
Confidence 467788999999999999999999 99999999999999999999999999876543321 12346799999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++|||||||++|+|++ |+.||........... ..........+...++.+.+++.+||+.||++||++.
T Consensus 288 ~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~ 363 (374)
T cd05106 288 DCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYK----MVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFS 363 (374)
T ss_pred CCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHH----HHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence 8889999999999999999997 8888865432211111 1111112223334568899999999999999999999
Q ss_pred HHHHHhccc
Q 019495 154 SLVTALSPL 162 (340)
Q Consensus 154 ~i~~~L~~~ 162 (340)
+|++.|+.+
T Consensus 364 ~l~~~l~~~ 372 (374)
T cd05106 364 QISQLIQRQ 372 (374)
T ss_pred HHHHHHHHH
Confidence 999998875
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-29 Score=211.46 Aligned_cols=141 Identities=19% Similarity=0.286 Sum_probs=124.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-ccccCCcccCcccccCCCCCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-SYSTNLAFTPPEYLRTGRVTP 80 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~ 80 (340)
+.....-++.||+.||+|||+.+ ||+|||||+|||+|.+|.+||+|||+++.....+ +.+||+-|+|||.+++.+++.
T Consensus 142 ~e~~arFYAAeivlAleylH~~~-iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~TlCGTPeYLAPEii~sk~ynk 220 (355)
T KOG0616|consen 142 SEPHARFYAAEIVLALEYLHSLD-IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTLCGTPEYLAPEIIQSKGYNK 220 (355)
T ss_pred CchhHHHHHHHHHHHHHHHHhcC-eeeccCChHHeeeccCCcEEEEeccceEEecCcEEEecCCccccChHHhhcCCCCc
Confidence 44556668999999999999999 9999999999999999999999999998766553 678999999999999999999
Q ss_pred CcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCC
Q 019495 81 ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 149 (340)
Q Consensus 81 ~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R 149 (340)
++|.|+|||++|||+.|.+||..+....+....+.. .-.+|...++++.+|+.+.++.|-.+|
T Consensus 221 avDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~------~v~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 221 AVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEG------KVKFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred chhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhC------cccCCcccCHHHHHHHHHHHhhhhHhh
Confidence 999999999999999999999988776555554443 235677788999999999999999999
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-29 Score=222.46 Aligned_cols=154 Identities=17% Similarity=0.296 Sum_probs=122.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.++.++|+|||++...... ....|+..|+|||++.+..
T Consensus 99 ~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~ 177 (285)
T cd05631 99 FDEQRAIFYAAELCCGLEDLQRER-IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEK 177 (285)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCC
Confidence 467788999999999999999999 999999999999999999999999998765433 2346789999999999888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC-----H
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN-----P 152 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps-----~ 152 (340)
++.++|||||||++|+|++|+.||...............+.. ....++...+..+.+|+.+||+.||.+||+ +
T Consensus 178 ~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~ 255 (285)
T cd05631 178 YTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE--DQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGA 255 (285)
T ss_pred CCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc--ccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCH
Confidence 999999999999999999999998654221111111111111 112345556788999999999999999997 6
Q ss_pred HHHHH
Q 019495 153 KSLVT 157 (340)
Q Consensus 153 ~~i~~ 157 (340)
+++++
T Consensus 256 ~~~~~ 260 (285)
T cd05631 256 AGVKQ 260 (285)
T ss_pred HHHhc
Confidence 77764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-29 Score=223.05 Aligned_cols=154 Identities=12% Similarity=0.117 Sum_probs=121.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-----------CccccCCcccCc
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----------KSYSTNLAFTPP 70 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-----------~~~~~~~~y~aP 70 (340)
++.....++.|++.||.|||+++ |+||||||+||+++.++.++|+|||+++..... ....||+.|+||
T Consensus 124 ~~~~~~~i~~qi~~~l~~lH~~~-iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ap 202 (294)
T PHA02882 124 NKKLIKNIMKDMLTTLEYIHEHG-ISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGL 202 (294)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCH
Confidence 45567789999999999999999 999999999999999999999999998754211 224589999999
Q ss_pred ccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchh-HHHh----hhhhccccccccCCCCCchhHHHHHHHHHHhhccC
Q 019495 71 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIR----DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 145 (340)
Q Consensus 71 E~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~ 145 (340)
|++.+..++.++|||||||+++||++|..||..... .... ......+..... ....++..+.+++..||..+
T Consensus 203 e~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 279 (294)
T PHA02882 203 DAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKI---KIKNANKFIYDFIECVTKLS 279 (294)
T ss_pred HHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhh---ccCCCCHHHHHHHHHHHhCC
Confidence 999988899999999999999999999999865421 1111 111111111111 12344688999999999999
Q ss_pred CCCCCCHHHHHHHh
Q 019495 146 PRERPNPKSLVTAL 159 (340)
Q Consensus 146 p~~Rps~~~i~~~L 159 (340)
|++||++.++++.|
T Consensus 280 ~~~rp~~~~l~~~~ 293 (294)
T PHA02882 280 YEEKPDYDALIKIF 293 (294)
T ss_pred CCCCCCHHHHHHhh
Confidence 99999999998865
|
|
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-29 Score=226.45 Aligned_cols=159 Identities=23% Similarity=0.362 Sum_probs=125.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
++|..+..++.||+.||.|||+++ |+||||||.||+++.++.++|+|||+++...... ...++..|+|||++.
T Consensus 170 l~~~~~~~~~~qi~~aL~~lH~~~-ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 248 (337)
T cd05054 170 LTLEDLISYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIF 248 (337)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhc
Confidence 578899999999999999999999 9999999999999999999999999987653221 223467899999999
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++|||||||++|||++ |..||............... ......+...+..+.+++.+||+.+|++||++.
T Consensus 249 ~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ 324 (337)
T cd05054 249 DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKE----GTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFS 324 (337)
T ss_pred CCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhc----cCCCCCCccCCHHHHHHHHHHccCChhhCcCHH
Confidence 8889999999999999999998 88777542211111111111 111122344567899999999999999999999
Q ss_pred HHHHHhccccc
Q 019495 154 SLVTALSPLQK 164 (340)
Q Consensus 154 ~i~~~L~~~~~ 164 (340)
+++..|+.+..
T Consensus 325 ell~~l~~~~~ 335 (337)
T cd05054 325 ELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHHHh
Confidence 99999987643
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=222.02 Aligned_cols=156 Identities=19% Similarity=0.302 Sum_probs=123.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCccccc-CC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLR-TG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~-~~ 76 (340)
+++.....|+.||++||+|+|..| +.|||+||+|||+.....+||+|||++|..... +.++.|++|+|||++. .+
T Consensus 107 fse~~irnim~QilqGL~hiHk~G-fFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~ 185 (538)
T KOG0661|consen 107 FSESDIRNIMYQILQGLAHIHKHG-FFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSG 185 (538)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcC-cccccCChhheEecccceeEecccccccccccCCCcchhhhcccccchHHhhhcc
Confidence 456788899999999999999999 999999999999998889999999999976533 5678899999999875 46
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhh-------------------------hccccccccCCCCCchhH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-------------------------LQMLTDSCLEGQFTDDDG 131 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~ 131 (340)
-|+.+.|+|++|||++|+.+-++.|++..--..-... +..+.+..+. ...+.++
T Consensus 186 ~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~-~L~p~~s 264 (538)
T KOG0661|consen 186 YYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLK-DLLPNAS 264 (538)
T ss_pred ccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChH-HhCcccC
Confidence 7999999999999999999999999874111000000 0111111111 1223377
Q ss_pred HHHHHHHHHhhccCCCCCCCHHHHHHH
Q 019495 132 TELVRLASRCLQYEPRERPNPKSLVTA 158 (340)
Q Consensus 132 ~~l~~li~~cl~~~p~~Rps~~~i~~~ 158 (340)
+++.++|.+|+.+||++|||+.+.++.
T Consensus 265 ~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 265 SEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 899999999999999999999999873
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-29 Score=224.70 Aligned_cols=150 Identities=22% Similarity=0.256 Sum_probs=121.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....||+.|+|||++.+.
T Consensus 90 ~~~~~~~~~~~qi~~~l~~lH~~~-i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 168 (312)
T cd05585 90 FDLSRARFYTAELLCALENLHKFN-VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGH 168 (312)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcccCCHHHHcCC
Confidence 467788899999999999999999 999999999999999999999999998753222 234689999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++|||||||++|+|++|+.||............... ...++...+..+.+++.+||+.||.+||++..+.
T Consensus 169 ~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~ 242 (312)
T cd05585 169 GYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQE------PLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQ 242 (312)
T ss_pred CCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcC------CCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHH
Confidence 8999999999999999999999998765443332222211 1234556678899999999999999998654443
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
+
T Consensus 243 e 243 (312)
T cd05585 243 E 243 (312)
T ss_pred H
Confidence 3
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=222.02 Aligned_cols=156 Identities=19% Similarity=0.279 Sum_probs=120.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.++..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+++.|+|||++.+..
T Consensus 107 ~~~~~~~~i~~qi~~aL~~lH~~~-iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 185 (290)
T cd07862 107 VPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 185 (290)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEcCCCCEEEccccceEeccCCcccccccccccccChHHHhCCC
Confidence 467888999999999999999999 999999999999999999999999998765433 2345789999999998888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccc--------------cccccC-------CCCCchhHHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML--------------TDSCLE-------GQFTDDDGTELVR 136 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~--------------~~~~~~-------~~~~~~~~~~l~~ 136 (340)
++.++|||||||++|||++|++||.+.............. ....+. ..+.+..+..+.+
T Consensus 186 ~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (290)
T cd07862 186 YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKD 265 (290)
T ss_pred CCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHH
Confidence 9999999999999999999998886543221111111000 000000 0011235577899
Q ss_pred HHHHhhccCCCCCCCHHHHHH
Q 019495 137 LASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 137 li~~cl~~~p~~Rps~~~i~~ 157 (340)
++.+||+.||++|||+.+++.
T Consensus 266 li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 266 LLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred HHHHHhccCchhcCCHHHHhc
Confidence 999999999999999999984
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-29 Score=216.17 Aligned_cols=153 Identities=20% Similarity=0.361 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCcccccC-
Q 019495 3 WAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRT- 75 (340)
Q Consensus 3 ~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~- 75 (340)
-...--+++||+.||.|+|+.+ |+||||||+|++++.+..+|+||||+++..... +..+.|.+|.|||++..
T Consensus 124 d~H~q~f~YQiLrgLKyiHSAn-ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~ 202 (359)
T KOG0660|consen 124 DDHAQYFLYQILRGLKYIHSAN-VIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNS 202 (359)
T ss_pred HHHHHHHHHHHHHhcchhhccc-ccccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhcc
Confidence 3445568999999999999999 999999999999999999999999999987431 34567999999998865
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcch-------------------hHHHhhhhhccccc-------cccCCCCCch
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHA-------------------LDLIRDRNLQMLTD-------SCLEGQFTDD 129 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~-------------------~~~~~~~~~~~~~~-------~~~~~~~~~~ 129 (340)
..||...||||.|||+.||++|++.|++.. ...+.......... ..+...+ +.
T Consensus 203 ~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~f-p~ 281 (359)
T KOG0660|consen 203 SEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIF-PN 281 (359)
T ss_pred ccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHc-CC
Confidence 579999999999999999999999987731 11111111111110 0111112 35
Q ss_pred hHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 130 DGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 130 ~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.++...+++.+||..||.+|+|+++.+.
T Consensus 282 a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 282 ANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred CCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 6788999999999999999999999985
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-29 Score=221.63 Aligned_cols=159 Identities=19% Similarity=0.253 Sum_probs=121.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
++|.+.++++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++...... ...++..|+|||++.
T Consensus 135 ~~~~~~~~i~~~i~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 213 (304)
T cd05096 135 ISYSSLLHVALQIASGMKYLSSLN-FVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECIL 213 (304)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHCC-ccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHh
Confidence 367788999999999999999999 9999999999999999999999999987654322 123467899999998
Q ss_pred CCCCCCCcceehHHHHHHHHhhCC--CCCCcchhHHHhhhhhcccc--ccccCCCCCchhHHHHHHHHHHhhccCCCCCC
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGK--HIPPSHALDLIRDRNLQMLT--DSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 150 (340)
++.++.++||||||+++|||+++. .|+................. ........+..++..+.+++.+||+.||.+||
T Consensus 214 ~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP 293 (304)
T cd05096 214 MGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERP 293 (304)
T ss_pred cCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCc
Confidence 888999999999999999998753 45543222211111100000 01111223445678899999999999999999
Q ss_pred CHHHHHHHhc
Q 019495 151 NPKSLVTALS 160 (340)
Q Consensus 151 s~~~i~~~L~ 160 (340)
|+.+|...|+
T Consensus 294 s~~~i~~~l~ 303 (304)
T cd05096 294 SFSDIHAFLT 303 (304)
T ss_pred CHHHHHHHHh
Confidence 9999998875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6e-29 Score=219.03 Aligned_cols=155 Identities=20% Similarity=0.265 Sum_probs=123.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||+++...... ...+++.|+|||++.
T Consensus 121 ~~~~~~~~~~~ql~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 199 (283)
T cd05091 121 LEPADFVHIVTQIAAGMEFLSSHH-VVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIM 199 (283)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHh
Confidence 356778899999999999999999 9999999999999999999999999987643322 223467899999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
++.++.++||||||+++|||++ |..|+.......+....... .....+..++..+.+++.+||+.+|++||++.
T Consensus 200 ~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~ 274 (283)
T cd05091 200 YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNR-----QVLPCPDDCPAWVYTLMLECWNEFPSRRPRFK 274 (283)
T ss_pred cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-----CcCCCCCCCCHHHHHHHHHHhCCCcccCCCHH
Confidence 8889999999999999999998 66666543332222111111 11234556778899999999999999999999
Q ss_pred HHHHHhcc
Q 019495 154 SLVTALSP 161 (340)
Q Consensus 154 ~i~~~L~~ 161 (340)
+|+..|+.
T Consensus 275 ~i~~~l~~ 282 (283)
T cd05091 275 DIHSRLRT 282 (283)
T ss_pred HHHHHhhC
Confidence 99998864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-29 Score=220.26 Aligned_cols=152 Identities=21% Similarity=0.242 Sum_probs=124.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---------CccccCCcccCcc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---------KSYSTNLAFTPPE 71 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---------~~~~~~~~y~aPE 71 (340)
|++.+...++++++.||+|||.+| ||||||||+|+||+++|+|||+|||.+.....+ ....||+.|+|||
T Consensus 207 ls~~~Ar~ylrDvv~GLEYLH~Qg-iiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE 285 (576)
T KOG0585|consen 207 LSEQQARKYLRDVVLGLEYLHYQG-IIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPE 285 (576)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchH
Confidence 467788999999999999999999 999999999999999999999999998755222 1246899999999
Q ss_pred cccCCC----CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCC
Q 019495 72 YLRTGR----VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 147 (340)
Q Consensus 72 ~~~~~~----~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~ 147 (340)
...++. .+.+.||||+||+||.|+.|+.||.+.....+-...... .+.-+..+.+...+.+||+++|.+||+
T Consensus 286 ~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~----pL~fP~~pe~~e~~kDli~~lL~KdP~ 361 (576)
T KOG0585|consen 286 LCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVND----PLEFPENPEINEDLKDLIKRLLEKDPE 361 (576)
T ss_pred hhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcC----cccCCCcccccHHHHHHHHHHhhcChh
Confidence 998743 467899999999999999999999887665554443333 222222234568899999999999999
Q ss_pred CCCCHHHHHH
Q 019495 148 ERPNPKSLVT 157 (340)
Q Consensus 148 ~Rps~~~i~~ 157 (340)
+|.+..+|..
T Consensus 362 ~Ri~l~~ik~ 371 (576)
T KOG0585|consen 362 QRITLPDIKL 371 (576)
T ss_pred heeehhhhee
Confidence 9999999874
|
|
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-29 Score=224.50 Aligned_cols=150 Identities=19% Similarity=0.306 Sum_probs=122.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.+...++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....||+.|+|||++.+.
T Consensus 92 l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 170 (328)
T cd05593 92 FSEDRTRFYGAEIVSALDYLHSGK-IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDN 170 (328)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCcCccChhhhcCC
Confidence 467788899999999999999999 999999999999999999999999998753221 234689999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC-----C
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP-----N 151 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s 151 (340)
.++.++|||||||++|+|++|+.||............... ...++...+..+.+++.+||+.||++|+ +
T Consensus 171 ~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~ 244 (328)
T cd05593 171 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------DIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDD 244 (328)
T ss_pred CCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccC------CccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCC
Confidence 8999999999999999999999998765433322221111 1234555678899999999999999997 7
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.+++.
T Consensus 245 ~~~il~ 250 (328)
T cd05593 245 AKEIMR 250 (328)
T ss_pred HHHHhc
Confidence 888875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-29 Score=217.85 Aligned_cols=152 Identities=18% Similarity=0.244 Sum_probs=123.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCC------CCeEEeccCCCccCCCCC---ccccCCcccCcc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED------GNPRLSTFGLMKNSRDGK---SYSTNLAFTPPE 71 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~------~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE 71 (340)
|++.+...++.||+.||++||+++ ||||||||.||||+.. -.+||+|||+++...++. +.+|++.|||||
T Consensus 106 l~e~t~r~Fm~QLA~alq~L~~~~-IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPE 184 (429)
T KOG0595|consen 106 LPEATARHFMQQLASALQFLHENN-IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPE 184 (429)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHhhCCccccCHH
Confidence 567788899999999999999999 9999999999999754 458999999999888763 678999999999
Q ss_pred cccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 72 YLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 72 ~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
++..++|+.|+|+||+|+|+|++++|+.||...+...+....-.. ....+.++...+..+.+++...+..+|.+|.+
T Consensus 185 V~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~---~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~ 261 (429)
T KOG0595|consen 185 VIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKG---NEIVPVLPAELSNPLRELLISLLQRNPKDRIS 261 (429)
T ss_pred HHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcc---ccccCchhhhccCchhhhhhHHHhcCccccCc
Confidence 999999999999999999999999999999877665554422111 11222233344556778888888999999988
Q ss_pred HHHHH
Q 019495 152 PKSLV 156 (340)
Q Consensus 152 ~~~i~ 156 (340)
+.+-.
T Consensus 262 ~~~~~ 266 (429)
T KOG0595|consen 262 FEDFF 266 (429)
T ss_pred hHHhh
Confidence 77644
|
|
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=215.03 Aligned_cols=156 Identities=21% Similarity=0.327 Sum_probs=126.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc-----cccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-----YSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~y~aPE~~~~ 75 (340)
+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++........ ...+..|+|||.+.+
T Consensus 101 l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 179 (263)
T cd05052 101 VNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 179 (263)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhcc
Confidence 467888999999999999999999 99999999999999999999999999876544321 123567999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
..++.++||||||+++|||++ |..|++............ .......+..++..+.+++.+||+.+|++||++.+
T Consensus 180 ~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ 254 (263)
T cd05052 180 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----KGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAE 254 (263)
T ss_pred CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-----CCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence 889999999999999999998 887876543332221111 11223445566789999999999999999999999
Q ss_pred HHHHhccc
Q 019495 155 LVTALSPL 162 (340)
Q Consensus 155 i~~~L~~~ 162 (340)
+++.|+.+
T Consensus 255 l~~~l~~~ 262 (263)
T cd05052 255 IHQAFETM 262 (263)
T ss_pred HHHHHHhh
Confidence 99998765
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.6e-29 Score=218.04 Aligned_cols=159 Identities=16% Similarity=0.238 Sum_probs=126.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
++|...+.++.||+.||.|||+++ ++||||||+||+++.++.+||+|||+++...... ...++..|++||++.
T Consensus 106 ~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~ 184 (279)
T cd05111 106 LDPQRLLNWCVQIAKGMYYLEEHR-MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESIL 184 (279)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhc
Confidence 468889999999999999999999 9999999999999999999999999987643321 223567899999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
++.++.++||||||+++||+++ |..|+.+.......... ........+..++..+..++.+||..+|++||++.
T Consensus 185 ~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~ 259 (279)
T cd05111 185 FGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLL-----EKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFK 259 (279)
T ss_pred cCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-----HCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHH
Confidence 8889999999999999999998 88777654332221111 11111122333557889999999999999999999
Q ss_pred HHHHHhcccccC
Q 019495 154 SLVTALSPLQKE 165 (340)
Q Consensus 154 ~i~~~L~~~~~~ 165 (340)
+++..|..+...
T Consensus 260 el~~~l~~~~~~ 271 (279)
T cd05111 260 ELANEFTRMARD 271 (279)
T ss_pred HHHHHHHHHHhC
Confidence 999999887654
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-29 Score=215.42 Aligned_cols=156 Identities=19% Similarity=0.231 Sum_probs=125.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc-------cccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-------YSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~-------~~~~~~y~aPE~~ 73 (340)
+++...+.++.|++.||.|||+++ ++||||||.||+++.++.+||+|||+++....... ..++..|+|||++
T Consensus 92 ~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 170 (257)
T cd05116 92 VTEKNITELVHQVSMGMKYLEETN-FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECM 170 (257)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHh
Confidence 467889999999999999999999 99999999999999999999999999876543321 1224689999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
....++.++|+||||+++|||++ |..||.......+..... .......+..++..+.++|.+||+.||++||++
T Consensus 171 ~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~-----~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~ 245 (257)
T cd05116 171 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIE-----SGERMECPQRCPPEMYDLMKLCWTYGVDERPGF 245 (257)
T ss_pred ccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-----CCCCCCCCCCCCHHHHHHHHHHhccCchhCcCH
Confidence 87888999999999999999998 888876543322211111 111223455677899999999999999999999
Q ss_pred HHHHHHhccc
Q 019495 153 KSLVTALSPL 162 (340)
Q Consensus 153 ~~i~~~L~~~ 162 (340)
.+|...|+..
T Consensus 246 ~~i~~~l~~~ 255 (257)
T cd05116 246 AVVELRLRNY 255 (257)
T ss_pred HHHHHHHhcc
Confidence 9999988764
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.7e-29 Score=218.68 Aligned_cols=159 Identities=21% Similarity=0.267 Sum_probs=127.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
++|..++.++.||+.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....++..|+|||++.
T Consensus 120 ~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 198 (291)
T cd05094 120 LGLSQMLHIASQIASGMVYLASQH-FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM 198 (291)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhc
Confidence 467889999999999999999999 999999999999999999999999998754332 1233467899999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++||||||+++|+|++ |..||.............. ......+..++..+.+++.+||+.+|++||++.
T Consensus 199 ~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~ 273 (291)
T cd05094 199 YRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ-----GRVLERPRVCPKEVYDIMLGCWQREPQQRLNIK 273 (291)
T ss_pred cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhC-----CCCCCCCccCCHHHHHHHHHHcccChhhCcCHH
Confidence 8889999999999999999999 8877655433222111111 111123344567899999999999999999999
Q ss_pred HHHHHhcccccC
Q 019495 154 SLVTALSPLQKE 165 (340)
Q Consensus 154 ~i~~~L~~~~~~ 165 (340)
+|++.|..+.+.
T Consensus 274 ~v~~~l~~~~~~ 285 (291)
T cd05094 274 EIYKILHALGKA 285 (291)
T ss_pred HHHHHHHHHHhh
Confidence 999999988553
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=225.92 Aligned_cols=156 Identities=21% Similarity=0.338 Sum_probs=122.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc------cccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS------YSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~------~~~~~~y~aPE~~~ 74 (340)
|+|...+.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++....... ..++..|+|||++.
T Consensus 211 l~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 289 (375)
T cd05104 211 LDTEDLLSFSYQVAKGMSFLASKN-CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIF 289 (375)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhc
Confidence 578889999999999999999999 99999999999999999999999999876543321 22346799999999
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++|||||||++|||++ |..||.............. .......+...+.++.+++.+||+.||++||++.
T Consensus 290 ~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 365 (375)
T cd05104 290 NCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIK----EGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFK 365 (375)
T ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHH----hCccCCCCCCCCHHHHHHHHHHccCChhHCcCHH
Confidence 8889999999999999999998 7766654322111111111 1111122334457899999999999999999999
Q ss_pred HHHHHhcc
Q 019495 154 SLVTALSP 161 (340)
Q Consensus 154 ~i~~~L~~ 161 (340)
+|++.|+.
T Consensus 366 eil~~l~~ 373 (375)
T cd05104 366 QIVQLIEQ 373 (375)
T ss_pred HHHHHHHh
Confidence 99998875
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.5e-29 Score=221.99 Aligned_cols=160 Identities=16% Similarity=0.243 Sum_probs=127.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc------cccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS------YSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~------~~~~~~y~aPE~~~ 74 (340)
+++...+.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++....... ...+..|++||++.
T Consensus 106 ~~~~~~~~~~~qi~~~L~~LH~~~-iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~ 184 (316)
T cd05108 106 IGSQYLLNWCVQIAKGMNYLEERR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESIL 184 (316)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhc
Confidence 467788999999999999999999 99999999999999999999999999986543321 12356799999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++||||||+++|||++ |..|+.+.....+... .. .......+..++..+.+++.+||..+|++||++.
T Consensus 185 ~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~ 259 (316)
T cd05108 185 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-LE----KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 259 (316)
T ss_pred cCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-Hh----CCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHH
Confidence 8889999999999999999998 8877765433222111 11 1111223345667899999999999999999999
Q ss_pred HHHHHhcccccCC
Q 019495 154 SLVTALSPLQKET 166 (340)
Q Consensus 154 ~i~~~L~~~~~~~ 166 (340)
+++..|..+....
T Consensus 260 ~l~~~l~~~~~~~ 272 (316)
T cd05108 260 ELIIEFSKMARDP 272 (316)
T ss_pred HHHHHHHHHHcCC
Confidence 9999988776543
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-29 Score=220.16 Aligned_cols=150 Identities=21% Similarity=0.267 Sum_probs=122.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-CccccCCcccCcccccCCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVT 79 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~ 79 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.+|.+||+|||+++..... ....|++.|+|||++.+..++
T Consensus 98 ~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 176 (291)
T cd05612 98 FSNSTGLFYASEIVCALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQSKGHN 176 (291)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEEecCcchhccCCcccccCChhhcCHHHHcCCCCC
Confidence 356778889999999999999999 999999999999999999999999998765443 245689999999999988889
Q ss_pred CCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC-----HHH
Q 019495 80 PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN-----PKS 154 (340)
Q Consensus 80 ~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps-----~~~ 154 (340)
.++|||||||++|+|++|+.||.......+....... ...++...+..+.+++.+||+.||.+||+ +.+
T Consensus 177 ~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~ 250 (291)
T cd05612 177 KAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG------KLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADD 250 (291)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHH
Confidence 9999999999999999999998765433322221111 12344455678999999999999999995 777
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
++.
T Consensus 251 ~l~ 253 (291)
T cd05612 251 VKN 253 (291)
T ss_pred Hhc
Confidence 774
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-29 Score=214.05 Aligned_cols=149 Identities=24% Similarity=0.345 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHHHHhCCCccccCCCCCCEEecCC-CCeEEeccCCCccCCCCC---ccccCCcccCcccccCC-CCCCCc
Q 019495 8 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRTG-RVTPES 82 (340)
Q Consensus 8 ~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~-~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~~-~~~~~~ 82 (340)
-+..||++||.|||+.+ |+||||||.|+|+|.+ |.+||||||.|+....+. ++..|+.|.|||.+.+. .|+.+.
T Consensus 129 LYt~Qlfrgl~yLh~~~-IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~I 207 (364)
T KOG0658|consen 129 LYTYQLFRGLAYLHSHG-ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSI 207 (364)
T ss_pred HHHHHHHHHHHHHHhcC-cccCCCChheEEEcCCCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCcee
Confidence 46899999999999999 9999999999999965 899999999999876554 55679999999999874 699999
Q ss_pred ceehHHHHHHHHhhCCCCCCcchhH----------------HHhhhhhc-------cccccccCCCCCchhHHHHHHHHH
Q 019495 83 VIYSFGTLLLDLLSGKHIPPSHALD----------------LIRDRNLQ-------MLTDSCLEGQFTDDDGTELVRLAS 139 (340)
Q Consensus 83 Di~s~G~il~el~~g~~~~~~~~~~----------------~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~li~ 139 (340)
||||.|||+.||+.|++.|++.... .+...... .+.......-+....+++..+++.
T Consensus 208 DiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~ 287 (364)
T KOG0658|consen 208 DIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLS 287 (364)
T ss_pred EEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHH
Confidence 9999999999999999999885221 11111111 111111111134456789999999
Q ss_pred HhhccCCCCCCCHHHHHH
Q 019495 140 RCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 140 ~cl~~~p~~Rps~~~i~~ 157 (340)
+++..+|.+|.++.+++.
T Consensus 288 ~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 288 KLLQYSPSKRLSALEALA 305 (364)
T ss_pred HHhccChhhcCCHHHHhc
Confidence 999999999999999874
|
|
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.8e-29 Score=233.84 Aligned_cols=150 Identities=19% Similarity=0.300 Sum_probs=124.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCcccccC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~ 75 (340)
++.....++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....||+.|+|||++.+
T Consensus 141 ~e~~~~~i~~qll~aL~~lH~~~-IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~ 219 (496)
T PTZ00283 141 REHEAGLLFIQVLLAVHHVHSKH-MIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRR 219 (496)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCC
Confidence 55677889999999999999999 999999999999999999999999998754321 24568999999999998
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i 155 (340)
..++.++|||||||++|||++|+.||.......+........ ....+..+++.+.+++.+||+.||.+||++.++
T Consensus 220 ~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~el 294 (496)
T PTZ00283 220 KPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGR-----YDPLPPSISPEMQEIVTALLSSDPKRRPSSSKL 294 (496)
T ss_pred CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCC-----CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHH
Confidence 889999999999999999999999987654433322222211 112455567899999999999999999999999
Q ss_pred HH
Q 019495 156 VT 157 (340)
Q Consensus 156 ~~ 157 (340)
+.
T Consensus 295 l~ 296 (496)
T PTZ00283 295 LN 296 (496)
T ss_pred Hh
Confidence 85
|
|
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=214.62 Aligned_cols=156 Identities=24% Similarity=0.312 Sum_probs=124.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
++|.+...++.||+.||.|||+++ |+||||||+||+++.++.++|+|||+++...... ...+++.|++||++.
T Consensus 109 ~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 187 (272)
T cd05075 109 LPTQMLVKFMTDIASGMEYLSSKS-FIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLA 187 (272)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHcc
Confidence 467888999999999999999999 9999999999999999999999999988654322 223456799999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++|+||||+++|||++ |..||.......+...... ......+..++..+.+++.+||+.+|++|||+.
T Consensus 188 ~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 262 (272)
T cd05075 188 DRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQ-----GNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFE 262 (272)
T ss_pred CCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHH
Confidence 8889999999999999999999 6777765333222111111 111123445667899999999999999999999
Q ss_pred HHHHHhccc
Q 019495 154 SLVTALSPL 162 (340)
Q Consensus 154 ~i~~~L~~~ 162 (340)
+++..|+.+
T Consensus 263 ~l~~~l~~~ 271 (272)
T cd05075 263 TLRCELEKA 271 (272)
T ss_pred HHHHHHHhh
Confidence 999988754
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=221.95 Aligned_cols=149 Identities=19% Similarity=0.233 Sum_probs=121.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-CccccCCcccCcccccCCCCCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVTP 80 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~ 80 (340)
++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....|++.|+|||++.+..++.
T Consensus 116 ~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 194 (329)
T PTZ00263 116 PNDVAKFYHAELVLAFEYLHSKD-IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGK 194 (329)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEECCCCCEEEeeccCceEcCCCcceecCChhhcCHHHHcCCCCCC
Confidence 56677789999999999999999 999999999999999999999999998865443 3456899999999999888899
Q ss_pred CcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC-----HHHH
Q 019495 81 ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN-----PKSL 155 (340)
Q Consensus 81 ~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps-----~~~i 155 (340)
++|||||||++|+|++|..||............... ...++...+..+.+++.+||+.||.+||+ +.++
T Consensus 195 ~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l 268 (329)
T PTZ00263 195 AVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAG------RLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADV 268 (329)
T ss_pred cceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcC------CcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHH
Confidence 999999999999999999998765433222221111 11234445678999999999999999987 5776
Q ss_pred HH
Q 019495 156 VT 157 (340)
Q Consensus 156 ~~ 157 (340)
+.
T Consensus 269 l~ 270 (329)
T PTZ00263 269 KN 270 (329)
T ss_pred hc
Confidence 64
|
|
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-29 Score=223.95 Aligned_cols=150 Identities=21% Similarity=0.338 Sum_probs=122.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHh-CCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~-~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~ 75 (340)
+++.....++.||+.||.|||+ ++ |+||||||+||+++.++.+||+|||+++..... ....||+.|+|||++.+
T Consensus 92 l~~~~~~~~~~qi~~aL~~lH~~~~-ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 170 (325)
T cd05594 92 FSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLED 170 (325)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCC-EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCcccCCHHHHcc
Confidence 4678888999999999999997 68 999999999999999999999999998753221 23468999999999998
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC-----
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP----- 150 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp----- 150 (340)
..++.++|||||||++|+|++|..||............... ...++...++.+.+++.+||+.||++|+
T Consensus 171 ~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~ 244 (325)
T cd05594 171 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------EIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPD 244 (325)
T ss_pred CCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCC
Confidence 88999999999999999999999998765433322221111 1124455678899999999999999996
Q ss_pred CHHHHHH
Q 019495 151 NPKSLVT 157 (340)
Q Consensus 151 s~~~i~~ 157 (340)
++.+++.
T Consensus 245 ~~~~il~ 251 (325)
T cd05594 245 DAKEIMQ 251 (325)
T ss_pred CHHHHhc
Confidence 8888875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-28 Score=212.32 Aligned_cols=156 Identities=24% Similarity=0.372 Sum_probs=125.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-ccccCCcccCcccccCCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-SYSTNLAFTPPEYLRTGRVT 79 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~ 79 (340)
++|...+.++.||+.||.|||+++ ++||||||+||+++.++.+|++|||+++...... ....+..|+|||++.+..++
T Consensus 99 ~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 177 (256)
T cd05082 99 LGGDCLLKFSLDVCEAMEYLEANN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFS 177 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EeccccchheEEEcCCCcEEecCCccceeccccCCCCccceeecCHHHHccCCCC
Confidence 467888999999999999999999 9999999999999999999999999987654332 23345689999999888899
Q ss_pred CCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 019495 80 PESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 158 (340)
Q Consensus 80 ~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 158 (340)
.++||||||+++|+|++ |+.|+.............. ......+..+++.+.+++.+||+.+|++|||+.++++.
T Consensus 178 ~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 252 (256)
T cd05082 178 TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-----GYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQ 252 (256)
T ss_pred chhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc-----CCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 99999999999999998 8877765433222111111 11223445567899999999999999999999999998
Q ss_pred hccc
Q 019495 159 LSPL 162 (340)
Q Consensus 159 L~~~ 162 (340)
|+.+
T Consensus 253 l~~~ 256 (256)
T cd05082 253 LEHI 256 (256)
T ss_pred HhcC
Confidence 8753
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=216.86 Aligned_cols=160 Identities=17% Similarity=0.241 Sum_probs=126.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc------cccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS------YSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~------~~~~~~y~aPE~~~ 74 (340)
+++.+.+.++.||+.||.|||+++ ++||||||+||+++.++.+||+|||+++....... ..++..|++||.+.
T Consensus 106 ~~~~~~~~~~~qi~~~L~~lH~~~-iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~ 184 (279)
T cd05109 106 IGSQDLLNWCVQIAKGMSYLEEVR-LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL 184 (279)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhc
Confidence 467889999999999999999999 99999999999999999999999999876543221 12356799999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++|||||||++|||++ |..|+.......+... +.. ......+..++..+.+++.+||+.||++||++.
T Consensus 185 ~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~ 259 (279)
T cd05109 185 HRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDL-LEK----GERLPQPPICTIDVYMIMVKCWMIDSECRPRFR 259 (279)
T ss_pred cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HHC----CCcCCCCccCCHHHHHHHHHHcCCChhhCcCHH
Confidence 8889999999999999999998 7777654332222111 111 111123345668899999999999999999999
Q ss_pred HHHHHhcccccCC
Q 019495 154 SLVTALSPLQKET 166 (340)
Q Consensus 154 ~i~~~L~~~~~~~ 166 (340)
++++.|..+....
T Consensus 260 ~l~~~l~~~~~~~ 272 (279)
T cd05109 260 ELVDEFSRMARDP 272 (279)
T ss_pred HHHHHHHHhhcCC
Confidence 9999888775543
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=220.78 Aligned_cols=149 Identities=19% Similarity=0.281 Sum_probs=120.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC----CCccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~ 76 (340)
+++.+...++.||+.||.|||+++ |+||||||+||+++.++.++|+|||+++.... .....||+.|+|||++.+.
T Consensus 93 ~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 171 (316)
T cd05620 93 FDLYRATFYAAEIVCGLQFLHSKG-IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGL 171 (316)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCC
Confidence 456788889999999999999999 99999999999999999999999999864321 1245689999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH-HH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK-SL 155 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~-~i 155 (340)
.++.++|||||||++|+|++|+.||.......+....... ...++...+..+.+++.+||+.||++||++. ++
T Consensus 172 ~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~ 245 (316)
T cd05620 172 KYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD------TPHYPRWITKESKDILEKLFERDPTRRLGVVGNI 245 (316)
T ss_pred CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHH
Confidence 8999999999999999999999998765443322221111 1223444667899999999999999999984 55
Q ss_pred H
Q 019495 156 V 156 (340)
Q Consensus 156 ~ 156 (340)
+
T Consensus 246 ~ 246 (316)
T cd05620 246 R 246 (316)
T ss_pred H
Confidence 5
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=216.71 Aligned_cols=159 Identities=22% Similarity=0.268 Sum_probs=126.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++.+++.++.||+.||.|||+++ ++||||||+||+++.++.++|+|||+++...... ...++..|+|||++.
T Consensus 117 l~~~~~~~~~~ql~~aL~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 195 (288)
T cd05093 117 LTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM 195 (288)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhc
Confidence 477889999999999999999999 9999999999999999999999999987543321 123466899999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++|+||||+++|+|++ |..||................ ....+..++..+.+++.+||+.||.+|||+.
T Consensus 196 ~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~-----~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~ 270 (288)
T cd05093 196 YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR-----VLQRPRTCPKEVYDLMLGCWQREPHMRLNIK 270 (288)
T ss_pred cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-----cCCCCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence 8888999999999999999998 777775543322221111111 1122334567899999999999999999999
Q ss_pred HHHHHhcccccC
Q 019495 154 SLVTALSPLQKE 165 (340)
Q Consensus 154 ~i~~~L~~~~~~ 165 (340)
++...|+.+...
T Consensus 271 ~v~~~l~~~~~~ 282 (288)
T cd05093 271 EIHSLLQNLAKA 282 (288)
T ss_pred HHHHHHHHHHHh
Confidence 999999888644
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-28 Score=215.61 Aligned_cols=161 Identities=23% Similarity=0.335 Sum_probs=124.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-------ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~y~aPE~~ 73 (340)
++|.++..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++...... ...++..|++||++
T Consensus 104 l~~~~~~~i~~~l~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~ 182 (283)
T cd05080 104 LNLAQLLLFAQQICEGMAYLHSQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECL 182 (283)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHh
Confidence 578899999999999999999999 9999999999999999999999999987654322 12345679999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhH---HHh-------hhhhccccccccCCCCCchhHHHHHHHHHHhhc
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD---LIR-------DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 143 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~---~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 143 (340)
.+..++.++||||||+++|+|++|..|+...... ... ................+..++..+.+++.+||+
T Consensus 183 ~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 262 (283)
T cd05080 183 KENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWE 262 (283)
T ss_pred cccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhc
Confidence 8888899999999999999999999876432110 000 000111111111222345567899999999999
Q ss_pred cCCCCCCCHHHHHHHhccc
Q 019495 144 YEPRERPNPKSLVTALSPL 162 (340)
Q Consensus 144 ~~p~~Rps~~~i~~~L~~~ 162 (340)
.+|++||++++++..|+.+
T Consensus 263 ~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 263 TEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred cChhhCCCHHHHHHHHHHh
Confidence 9999999999999988765
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-28 Score=221.75 Aligned_cols=150 Identities=19% Similarity=0.331 Sum_probs=122.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....||+.|+|||++.++
T Consensus 92 ~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 170 (323)
T cd05595 92 FTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 170 (323)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcCcCCcccccCC
Confidence 467788899999999999999999 999999999999999999999999987653221 234688999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC-----C
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP-----N 151 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s 151 (340)
.++.++|||||||++|+|++|+.||............... ...++..+++.+.+++.+||+.||++|+ +
T Consensus 171 ~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~ 244 (323)
T cd05595 171 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSD 244 (323)
T ss_pred CCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCC
Confidence 8999999999999999999999998654433222221111 1124555678899999999999999998 7
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.+++.
T Consensus 245 ~~~~l~ 250 (323)
T cd05595 245 AKEVME 250 (323)
T ss_pred HHHHHc
Confidence 777764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-28 Score=199.09 Aligned_cols=159 Identities=20% Similarity=0.277 Sum_probs=124.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-CccccCCCCCCEEecCCCCeEEeccCCCccCCCC-------------CccccCCc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-------------KSYSTNLA 66 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~-~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-------------~~~~~~~~ 66 (340)
+++.+.+.|+.+|++||.+||+.. ++.||||||.||++++++.+++.|||.+....-. ..-..|..
T Consensus 124 ~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~p 203 (302)
T KOG2345|consen 124 VSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIP 203 (302)
T ss_pred cCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCc
Confidence 467889999999999999999985 5999999999999999999999999988754321 11235899
Q ss_pred ccCcccccC---CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhh-ccccccccCCCCCchhHHHHHHHHHHhh
Q 019495 67 FTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL-QMLTDSCLEGQFTDDDGTELVRLASRCL 142 (340)
Q Consensus 67 y~aPE~~~~---~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl 142 (340)
|+|||.+.- .-.+.++|||||||++|.|+.|..||..... ..+.+ ..+....+.-+-....+..+.++++.|+
T Consensus 204 yRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~---~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~ml 280 (302)
T KOG2345|consen 204 YRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ---QGGSLALAVQNAQISIPNSSRYSEALHQLIKSML 280 (302)
T ss_pred ccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh---cCCeEEEeeeccccccCCCCCccHHHHHHHHHHh
Confidence 999999863 3468899999999999999999998853211 11211 1222222222223347789999999999
Q ss_pred ccCCCCCCCHHHHHHHhccc
Q 019495 143 QYEPRERPNPKSLVTALSPL 162 (340)
Q Consensus 143 ~~~p~~Rps~~~i~~~L~~~ 162 (340)
+.||.+||+..+++..++.+
T Consensus 281 qvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 281 QVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred cCCcccCCCHHHHHHHHHhh
Confidence 99999999999999887765
|
|
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-28 Score=221.37 Aligned_cols=145 Identities=19% Similarity=0.316 Sum_probs=119.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC----CCccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~ 76 (340)
+++.++..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++.... .....||+.|+|||++.+.
T Consensus 98 ~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 176 (323)
T cd05616 98 FKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQ 176 (323)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCC
Confidence 467788999999999999999999 99999999999999999999999999875332 1245689999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.++.++|+|||||++|||++|+.||.......+....... ...++...+..+.+++.+|++.+|.+|++.
T Consensus 177 ~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 177 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------NVAYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 8999999999999999999999998765433322221111 123455567889999999999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-28 Score=207.94 Aligned_cols=160 Identities=19% Similarity=0.265 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC-CC
Q 019495 4 AMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG-RV 78 (340)
Q Consensus 4 ~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~-~~ 78 (340)
.++--++.|+++|+.|||.++ |+|||||++|+|+++.|.+||+|||+++..+.. +..+-|++|.|||.+.+. .|
T Consensus 177 ~evK~L~~QlL~glk~lH~~w-ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~ty 255 (419)
T KOG0663|consen 177 GEVKTLMLQLLRGLKHLHDNW-ILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTY 255 (419)
T ss_pred HHHHHHHHHHHHHHHHHhhce-eEecccchhheeeccCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCccc
Confidence 455668999999999999999 999999999999999999999999999987765 344568999999999875 49
Q ss_pred CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhc-------------------------cccccccCCCCCch-hHH
Q 019495 79 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-------------------------MLTDSCLEGQFTDD-DGT 132 (340)
Q Consensus 79 ~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~-~~~ 132 (340)
+.+.|+||+|||+.|++++++.|++..-.......+. ..+...++..++.. .+.
T Consensus 256 st~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse 335 (419)
T KOG0663|consen 256 STAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSE 335 (419)
T ss_pred CcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccch
Confidence 9999999999999999999998877422111111111 11111122222222 457
Q ss_pred HHHHHHHHhhccCCCCCCCHHHHHHHhcccccCC
Q 019495 133 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 166 (340)
Q Consensus 133 ~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~ 166 (340)
...+++..++..||.+|.|+++.+. +.++...
T Consensus 336 ~g~~Lln~llt~dP~kR~tA~~~L~--h~~F~e~ 367 (419)
T KOG0663|consen 336 QGFDLLNKLLTYDPGKRITAEDGLK--HEYFRET 367 (419)
T ss_pred hHHHHHHHHhccCccccccHHHhhc--ccccccC
Confidence 7899999999999999999999885 5555543
|
|
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-28 Score=216.54 Aligned_cols=160 Identities=21% Similarity=0.267 Sum_probs=126.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.+.+.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++...... .....+..|++||++.+..
T Consensus 116 l~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 194 (297)
T cd05089 116 LTSQQLLQFASDVATGMQYLSEKQ-FIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSV 194 (297)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccCcCCcceEEECCCCeEEECCcCCCccccceeccCCCCcCccccCchhhccCC
Confidence 457788999999999999999999 999999999999999999999999997643221 1112245799999998888
Q ss_pred CCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
++.++|||||||++|||++ |..||.............. ......+..++..+.+++.+||+.+|.+||++.+++
T Consensus 195 ~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~ 269 (297)
T cd05089 195 YTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-----GYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQIS 269 (297)
T ss_pred CCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhc-----CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 8999999999999999997 8888765433322221111 112233445668899999999999999999999999
Q ss_pred HHhcccccCC
Q 019495 157 TALSPLQKET 166 (340)
Q Consensus 157 ~~L~~~~~~~ 166 (340)
..|..+....
T Consensus 270 ~~l~~~~~~~ 279 (297)
T cd05089 270 VQLSRMLEAR 279 (297)
T ss_pred HHHHHHHHhh
Confidence 9888776543
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-28 Score=222.49 Aligned_cols=150 Identities=17% Similarity=0.207 Sum_probs=123.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-CccccCCcccCcccccCCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVT 79 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~ 79 (340)
+++.....++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... ....||+.|+|||++.+..++
T Consensus 128 ~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 206 (340)
T PTZ00426 128 FPNDVGCFYAAQIVLIFEYLQSLN-IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHG 206 (340)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEecCCCCeecCCCcceecCChhhcCHHHHhCCCCC
Confidence 456788899999999999999999 999999999999999999999999998765433 345789999999999888889
Q ss_pred CCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC-----CHHH
Q 019495 80 PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP-----NPKS 154 (340)
Q Consensus 80 ~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s~~~ 154 (340)
.++|+|||||++|||++|..||............... ...++...+..+.+++.+|++.||.+|+ ++++
T Consensus 207 ~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~ 280 (340)
T PTZ00426 207 KAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEG------IIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQN 280 (340)
T ss_pred ccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHH
Confidence 9999999999999999999998765433222222211 1123455567899999999999999995 7888
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
++.
T Consensus 281 ~~~ 283 (340)
T PTZ00426 281 VKE 283 (340)
T ss_pred HHc
Confidence 875
|
|
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-28 Score=222.71 Aligned_cols=156 Identities=16% Similarity=0.255 Sum_probs=119.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||++.+..
T Consensus 116 l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~ 194 (355)
T cd07874 116 LDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 194 (355)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEECCCCCEEEeeCcccccCCCccccCCccccCCccCHHHHcCCC
Confidence 356777889999999999999999 999999999999999999999999998865443 2346789999999999888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccc----------------------------------cccc-
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT----------------------------------DSCL- 122 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~- 122 (340)
++.++|||||||++|+|++|+.||...............+. +...
T Consensus 195 ~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (355)
T cd07874 195 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFP 274 (355)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccc
Confidence 99999999999999999999998865422111000000000 0000
Q ss_pred -CCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 123 -EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 123 -~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
....+...+..+.+++.+||+.||++|||+.+++.
T Consensus 275 ~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~ 310 (355)
T cd07874 275 ADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQ 310 (355)
T ss_pred cccccccccchHHHHHHHHHhcCCchhcCCHHHHhc
Confidence 00111223467899999999999999999999986
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-29 Score=231.54 Aligned_cols=212 Identities=18% Similarity=0.230 Sum_probs=161.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-ccc----c--CCcccCccccc
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-SYS----T--NLAFTPPEYLR 74 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-~~~----~--~~~y~aPE~~~ 74 (340)
+|-+.+.++++|+.||.||-+.+ +|||||...|||++.+-.+||+|||+++...++. ... | ..+|+|||.+.
T Consensus 729 tviQLVgMLrGIAsGMkYLsdm~-YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa 807 (996)
T KOG0196|consen 729 TVIQLVGMLRGIASGMKYLSDMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIA 807 (996)
T ss_pred EeehHHHHHHHHHHHhHHHhhcC-chhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhh
Confidence 45678899999999999999999 9999999999999999999999999999876553 111 1 36799999999
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
..++|.+||||||||++||.++ |..|+++...+..-+ .+...++.+.|.+|+..+.+||+.||++|-.+||.|.
T Consensus 808 ~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIk-----aIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~ 882 (996)
T KOG0196|consen 808 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIK-----AIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFA 882 (996)
T ss_pred hcccCchhhccccceEEEEecccCCCcccccchHHHHH-----HHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHH
Confidence 9999999999999999999886 777887765443322 2333455667889999999999999999999999999
Q ss_pred HHHHHhcccccCCCCCcccccCCCCCCCCCCCCCCC--CccccchhhHHHHHHHHhccCCchhhhhhhhhhhh
Q 019495 154 SLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLG--EACSRRDLTAIHEILEKISYKDDEGVANELSFQMW 224 (340)
Q Consensus 154 ~i~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (340)
+|+..|+++...+..-- ......+.+..++. ...+...+.++.+|++.|........+...-|...
T Consensus 883 qiV~~lDklIrnP~SLk-----~~~~~~~r~s~~lld~~~~~~~~f~sv~~WL~aIkm~rY~~~F~~ag~~s~ 950 (996)
T KOG0196|consen 883 QIVSTLDKLIRNPNSLK-----TIAPESPRPSQPLLDRSGSDFTPFRSVGDWLEAIKMGRYKEHFAAAGYTSF 950 (996)
T ss_pred HHHHHHHHHhcCchhhc-----ccCCCCCCCcccccCCCCCCCcccCCHHHHHHHhhhhHHHHHHHhcCcccH
Confidence 99999999987754211 11111111222222 23355678899999999877666555544444333
|
|
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-28 Score=219.79 Aligned_cols=150 Identities=19% Similarity=0.315 Sum_probs=121.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC----CCccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++.... .....|++.|+|||++.+.
T Consensus 98 l~~~~~~~~~~qi~~al~~lH~~~-ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~ 176 (324)
T cd05589 98 FSEPRAVFYAACVVLGLQYLHENK-IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTET 176 (324)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCcccccccCccccCHhHhcCC
Confidence 467889999999999999999999 99999999999999999999999998765322 1245689999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC-----
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN----- 151 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps----- 151 (340)
.++.++|||||||++|+|++|+.||............... ...++...+..+.+++.+||+.||.+||+
T Consensus 177 ~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~ 250 (324)
T cd05589 177 SYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVND------EVRYPRFLSREAISIMRRLLRRNPERRLGSGEKD 250 (324)
T ss_pred CCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCC
Confidence 8999999999999999999999998765433222221111 11244456688999999999999999994
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.+++.
T Consensus 251 ~~~l~~ 256 (324)
T cd05589 251 AEDVKK 256 (324)
T ss_pred HHHHhh
Confidence 555554
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-28 Score=219.96 Aligned_cols=150 Identities=18% Similarity=0.289 Sum_probs=121.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||++...... ....|++.|+|||++.+.
T Consensus 93 ~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 171 (321)
T cd05591 93 FDEPRSRFYAAEVTLALMFLHRHG-VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQEL 171 (321)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccCccccCHHHHcCC
Confidence 456788889999999999999999 999999999999999999999999988753221 234678999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC------
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP------ 150 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp------ 150 (340)
.++.++|||||||++|+|++|+.||............... ...++...+..+.+++.+||+.||++||
T Consensus 172 ~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~ 245 (321)
T cd05591 172 EYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD------DVLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQ 245 (321)
T ss_pred CCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCC
Confidence 8999999999999999999999998765433322222111 1123444568899999999999999999
Q ss_pred -CHHHHHH
Q 019495 151 -NPKSLVT 157 (340)
Q Consensus 151 -s~~~i~~ 157 (340)
++.+++.
T Consensus 246 ~~~~~~~~ 253 (321)
T cd05591 246 GGEDAIKQ 253 (321)
T ss_pred CCHHHHhc
Confidence 6777764
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.4e-29 Score=230.47 Aligned_cols=156 Identities=24% Similarity=0.327 Sum_probs=119.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC-CeEEeccCCCccCCCC---CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~-~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++ .+||+|||+++..... ....+|+.|+|||++.+.
T Consensus 167 l~~~~~~~~~~qi~~gL~yLH~~~-IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~ 245 (440)
T PTZ00036 167 LPLFLVKLYSYQLCRALAYIHSKF-ICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGA 245 (440)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EecCCcCHHHEEEcCCCCceeeeccccchhccCCCCcccCCCCcCccCHHHhcCC
Confidence 456778889999999999999999 99999999999998665 6999999999865433 245678999999998754
Q ss_pred -CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcc-----------------------ccccccCCCCCchhHH
Q 019495 77 -RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM-----------------------LTDSCLEGQFTDDDGT 132 (340)
Q Consensus 77 -~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~ 132 (340)
.++.++|||||||++|||++|.+||.+............. +....+...+|...+.
T Consensus 246 ~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~ 325 (440)
T PTZ00036 246 TNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPD 325 (440)
T ss_pred CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCH
Confidence 6899999999999999999999988764322111111100 0000111113334567
Q ss_pred HHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 133 ELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 133 ~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
++.+++.+||+.||.+|||+.+++.
T Consensus 326 ~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 326 DAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhC
Confidence 8999999999999999999999984
|
|
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-28 Score=219.14 Aligned_cols=149 Identities=22% Similarity=0.356 Sum_probs=120.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....||+.|+|||++.+.
T Consensus 93 ~~~~~~~~~~~qi~~al~~LH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 171 (316)
T cd05592 93 FDEARARFYAAEIICGLQFLHKKG-IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQ 171 (316)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCCccccCHHHHcCC
Confidence 356677889999999999999999 999999999999999999999999998754322 234689999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH-HH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK-SL 155 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~-~i 155 (340)
.++.++|||||||++|+|++|+.||.......+....... ...++..++..+.+++.+||+.||.+||++. ++
T Consensus 172 ~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l 245 (316)
T cd05592 172 KYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND------RPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDI 245 (316)
T ss_pred CCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHH
Confidence 8999999999999999999999998765433322221111 1234455668899999999999999999875 45
Q ss_pred H
Q 019495 156 V 156 (340)
Q Consensus 156 ~ 156 (340)
+
T Consensus 246 ~ 246 (316)
T cd05592 246 R 246 (316)
T ss_pred H
Confidence 4
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-28 Score=219.94 Aligned_cols=145 Identities=21% Similarity=0.298 Sum_probs=118.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC----CCccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++.... .....||+.|+|||++.+.
T Consensus 93 l~~~~~~~~~~ql~~~L~~lH~~~-ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 171 (320)
T cd05590 93 FDEARARFYAAEITSALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEM 171 (320)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCC
Confidence 456778889999999999999999 99999999999999999999999999775321 1234689999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.++.++|+|||||++|+|++|+.||.......+....... ...++...+..+.+++.+||+.||++||++
T Consensus 172 ~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 172 LYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND------EVVYPTWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred CCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence 8999999999999999999999998765443332222211 112344456889999999999999999998
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-28 Score=215.82 Aligned_cols=154 Identities=20% Similarity=0.305 Sum_probs=121.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~ 76 (340)
+++..++.++.||+.||.|||+++ |+||||||+||+++.++.++|+|||++....... ...+++.|+|||++.+.
T Consensus 94 l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~ 172 (280)
T cd05608 94 FPEPRACFYTAQIISGLEHLHQRR-IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGE 172 (280)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCCcCccCHHHhcCC
Confidence 467888999999999999999999 9999999999999999999999999987654332 34678999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC-----C
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP-----N 151 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s 151 (340)
.++.++|+||||+++|+|++|+.||................... ...++..++..+.+++.+||+.||++|| +
T Consensus 173 ~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~ 250 (280)
T cd05608 173 EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND--SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGN 250 (280)
T ss_pred CCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc--CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCC
Confidence 89999999999999999999999886532211111111111111 1133455678899999999999999999 5
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+++++.
T Consensus 251 ~~~~l~ 256 (280)
T cd05608 251 CDGLRT 256 (280)
T ss_pred HHHHhc
Confidence 566664
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-28 Score=211.43 Aligned_cols=152 Identities=24% Similarity=0.369 Sum_probs=119.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCC--------eEEeccCCCccCCCCCccccCCcccCccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN--------PRLSTFGLMKNSRDGKSYSTNLAFTPPEY 72 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~--------~kl~dfg~~~~~~~~~~~~~~~~y~aPE~ 72 (340)
+++.+++.++.||+.||.|||+++ |+||||||+||+++.++. ++++|||++..........++..|+|||+
T Consensus 97 ~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~ 175 (258)
T cd05078 97 INISWKLEVAKQLAWALHFLEDKG-LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEILLERIPWVPPEC 175 (258)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEecccccccCCCceEEecccccccccCCchhccccCCccCchh
Confidence 467888999999999999999999 999999999999987664 69999999877666666678899999999
Q ss_pred ccCC-CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 73 LRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 73 ~~~~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
+.+. .++.++|+||||+++|+|++|..++......... ..... ....++......+.+++.+||+.+|++|||
T Consensus 176 ~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 249 (258)
T cd05078 176 IENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK-LQFYE-----DRHQLPAPKWTELANLINQCMDYEPDFRPS 249 (258)
T ss_pred ccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH-HHHHH-----ccccCCCCCcHHHHHHHHHHhccChhhCCC
Confidence 9864 4789999999999999999996444322111111 11110 012334445578999999999999999999
Q ss_pred HHHHHHHh
Q 019495 152 PKSLVTAL 159 (340)
Q Consensus 152 ~~~i~~~L 159 (340)
+++|++.|
T Consensus 250 ~~~il~~l 257 (258)
T cd05078 250 FRAIIRDL 257 (258)
T ss_pred HHHHHHhc
Confidence 99999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-28 Score=228.41 Aligned_cols=156 Identities=18% Similarity=0.274 Sum_probs=116.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhC-CCccccCCCCCCEEecCCC----------------CeEEeccCCCccCCCC-Cccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDG----------------NPRLSTFGLMKNSRDG-KSYS 62 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~-~~iiH~dlk~~nill~~~~----------------~~kl~dfg~~~~~~~~-~~~~ 62 (340)
+++.....|+.||+.||.|||++ + ||||||||+|||++.++ .+||+|||.+...... ....
T Consensus 228 l~~~~~~~i~~qi~~aL~yLH~~~g-IiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~~~~~ 306 (467)
T PTZ00284 228 FSHRHLAQIIFQTGVALDYFHTELH-LMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSRTAIV 306 (467)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcccccccc
Confidence 46778889999999999999984 8 99999999999998765 4999999987643322 3467
Q ss_pred cCCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhh---hc----------------cccc----
Q 019495 63 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN---LQ----------------MLTD---- 119 (340)
Q Consensus 63 ~~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~---~~----------------~~~~---- 119 (340)
||+.|+|||++.+..++.++|||||||++|||++|+.||............ .. .+..
T Consensus 307 gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 386 (467)
T PTZ00284 307 STRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQ 386 (467)
T ss_pred CCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhccc
Confidence 899999999999888999999999999999999999998653221100000 00 0000
Q ss_pred --cccCC----------CC-CchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 120 --SCLEG----------QF-TDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 120 --~~~~~----------~~-~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+.... .. .......+.+||.+||+.||++|||+.++++
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 387 LRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred ccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 00000 00 0011356789999999999999999999986
|
|
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-28 Score=214.88 Aligned_cols=156 Identities=23% Similarity=0.334 Sum_probs=125.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++...+.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...++..|+|||++.
T Consensus 129 l~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 207 (293)
T cd05053 129 LTQKDLVSFAYQVARGMEFLASKK-CIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALF 207 (293)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCC-ccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhc
Confidence 467888999999999999999999 9999999999999999999999999987654322 112356799999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++|||||||++|||++ |..|+.............. ......+..++..+.+++.+||..+|++|||+.
T Consensus 208 ~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 282 (293)
T cd05053 208 DRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKE-----GYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFK 282 (293)
T ss_pred cCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHc-----CCcCCCCCCCCHHHHHHHHHHcccCcccCcCHH
Confidence 8889999999999999999997 8777765433222211111 112233445668899999999999999999999
Q ss_pred HHHHHhccc
Q 019495 154 SLVTALSPL 162 (340)
Q Consensus 154 ~i~~~L~~~ 162 (340)
++++.|+.+
T Consensus 283 eil~~l~~~ 291 (293)
T cd05053 283 QLVEDLDRM 291 (293)
T ss_pred HHHHHHHHh
Confidence 999998765
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.7e-28 Score=211.97 Aligned_cols=156 Identities=22% Similarity=0.311 Sum_probs=124.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc------cccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS------YSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~------~~~~~~y~aPE~~~ 74 (340)
+++.....++.|++.||.|||+++ ++||||||+||++++++.+||+|||+++....... ...+..|++||.+.
T Consensus 110 ~~~~~~~~~~~~i~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 188 (273)
T cd05035 110 LPLQTLLKFMVDIALGMEYLSNRN-FIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLA 188 (273)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcc
Confidence 467788899999999999999999 99999999999999999999999999876543321 22356899999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++||||||+++|||++ |..||.......+...... ......+..++..+.+++.+||+.||++||++.
T Consensus 189 ~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ 263 (273)
T cd05035 189 DRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRH-----GNRLKQPEDCLDELYDLMYSCWRADPKDRPTFT 263 (273)
T ss_pred cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHH
Confidence 8888999999999999999999 7777655433222111111 112234556678999999999999999999999
Q ss_pred HHHHHhccc
Q 019495 154 SLVTALSPL 162 (340)
Q Consensus 154 ~i~~~L~~~ 162 (340)
+++..|+.+
T Consensus 264 e~~~~l~~~ 272 (273)
T cd05035 264 KLREVLENI 272 (273)
T ss_pred HHHHHHHhh
Confidence 999988765
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-28 Score=222.32 Aligned_cols=156 Identities=19% Similarity=0.245 Sum_probs=117.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-----CccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~ 75 (340)
+++...+.++.||+.||.|||+++ ||||||||+||+++.++.+||+|||+++..... ....||+.|+|||++.+
T Consensus 179 l~~~~~~~i~~qi~~aL~ylH~~~-IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 257 (391)
T PHA03212 179 IAICDILAIERSVLRAIQYLHENR-IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLAR 257 (391)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCccCCCChhhhcC
Confidence 467788999999999999999999 999999999999999999999999998653221 23468999999999998
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchh--------HHHhh---------------------hhhcccccc--ccCC
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL--------DLIRD---------------------RNLQMLTDS--CLEG 124 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~--------~~~~~---------------------~~~~~~~~~--~~~~ 124 (340)
..++.++|||||||++|||++|+.|+..... ..+.. ......... ....
T Consensus 258 ~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (391)
T PHA03212 258 DPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPG 337 (391)
T ss_pred CCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCC
Confidence 8899999999999999999999977643110 00000 000000000 0000
Q ss_pred CCC-----chhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 125 QFT-----DDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 125 ~~~-----~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
..+ ...+..+.+++.+||+.||.+|||+.++++
T Consensus 338 ~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 338 SRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred CCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000 123568999999999999999999999985
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-28 Score=215.71 Aligned_cols=156 Identities=17% Similarity=0.266 Sum_probs=119.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-----CccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~ 75 (340)
+++.....++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++...... ....+++.|+|||++.+
T Consensus 97 ~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 175 (287)
T cd07848 97 VPPEKVRSYIYQLIKAIHWCHKND-IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLG 175 (287)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccccccccccCCcHHHcC
Confidence 456788899999999999999999 999999999999999999999999998765432 23457899999999988
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhc---cc---------ccccc--------------CCCCCch
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ---ML---------TDSCL--------------EGQFTDD 129 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~---~~---------~~~~~--------------~~~~~~~ 129 (340)
..++.++|+|||||++|||++|+.||.............. .+ .++.. .......
T Consensus 176 ~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (287)
T cd07848 176 APYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGI 255 (287)
T ss_pred CCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcc
Confidence 8899999999999999999999998875422111000000 00 00000 0001122
Q ss_pred hHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 130 DGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 130 ~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.+..+.+++.+||+.||++|||+++++.
T Consensus 256 ~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 256 LSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred cCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 4677999999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-28 Score=215.32 Aligned_cols=156 Identities=13% Similarity=0.213 Sum_probs=120.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....++..|+|||++.+..
T Consensus 105 ~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 183 (288)
T cd07863 105 LPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQST 183 (288)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccCccccccCcccCCCccccccccCchHhhCCC
Confidence 467788999999999999999999 999999999999999999999999998765433 2345788999999998888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccc--------------cccccC-------CCCCchhHHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML--------------TDSCLE-------GQFTDDDGTELVR 136 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~--------------~~~~~~-------~~~~~~~~~~l~~ 136 (340)
++.++||||+||++|+|++|++||................ ....+. ....+..+..+.+
T Consensus 184 ~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (288)
T cd07863 184 YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQ 263 (288)
T ss_pred CCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHH
Confidence 9999999999999999999998875532211111110000 000000 0111234577899
Q ss_pred HHHHhhccCCCCCCCHHHHHH
Q 019495 137 LASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 137 li~~cl~~~p~~Rps~~~i~~ 157 (340)
++.+|++.||++|||+.+++.
T Consensus 264 li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 264 LLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred HHHHHhccCcccCCCHHHHhc
Confidence 999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-28 Score=216.17 Aligned_cols=158 Identities=22% Similarity=0.325 Sum_probs=126.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
++|.+++.++.||+.||.|||+++ ++||||||+||+++.++.+||+|||+++...... ...+++.|+|||++.
T Consensus 134 ~~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 212 (304)
T cd05101 134 MTFKDLVSCTYQVARGMEYLASQK-CIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALF 212 (304)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHCC-eeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhc
Confidence 467788999999999999999999 9999999999999999999999999987654321 123456799999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++||||||+++|++++ |..|+.......+....... .....+..++..+.+++.+||..+|++||++.
T Consensus 213 ~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~ 287 (304)
T cd05101 213 DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG-----HRMDKPANCTNELYMMMRDCWHAIPSHRPTFK 287 (304)
T ss_pred cCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC-----CcCCCCCCCCHHHHHHHHHHcccChhhCCCHH
Confidence 8889999999999999999998 66666554333322211111 11123445678899999999999999999999
Q ss_pred HHHHHhccccc
Q 019495 154 SLVTALSPLQK 164 (340)
Q Consensus 154 ~i~~~L~~~~~ 164 (340)
++++.|+.+..
T Consensus 288 e~l~~l~~~~~ 298 (304)
T cd05101 288 QLVEDLDRILT 298 (304)
T ss_pred HHHHHHHHHHH
Confidence 99999988754
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-28 Score=224.70 Aligned_cols=144 Identities=21% Similarity=0.341 Sum_probs=124.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCC----CCCccccCCcccCcccccCCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----DGKSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~----~~~~~~~~~~y~aPE~~~~~~ 77 (340)
++....-++..|+.||.|||+++ |||||||.+|||+|.+|++||+|||+++... ...+++||+-|||||++.++.
T Consensus 466 ~e~rarfyaAev~l~L~fLH~~~-IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~ 544 (694)
T KOG0694|consen 466 SEPRARFYAAEVVLGLQFLHENG-IIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQS 544 (694)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcC-ceeeecchhheEEcccCcEEecccccccccCCCCCccccccCChhhcChhhhccCc
Confidence 44555668999999999999999 9999999999999999999999999998643 335789999999999999999
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
|+.+.|.|||||++|||+.|..||+++.-+.+-...+.. ...+|..++.+...|+++++..+|++|..+
T Consensus 545 Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d------~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 545 YTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND------EVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred ccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC------CCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 999999999999999999999999977555444333332 334677788999999999999999999766
|
|
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-28 Score=219.77 Aligned_cols=145 Identities=19% Similarity=0.317 Sum_probs=118.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC----CCccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~ 76 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++.... .....||+.|+|||++.+.
T Consensus 98 ~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 176 (324)
T cd05587 98 FKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQ 176 (324)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceeeecCCccccChhhhcCC
Confidence 467788899999999999999999 99999999999999999999999998764321 1234689999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.++.++|+|||||++|+|++|+.||............... ...++...+..+.+++.+||..||.+|++.
T Consensus 177 ~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 177 PYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEH------NVSYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 8999999999999999999999998755433222221111 123455567889999999999999999976
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-28 Score=220.89 Aligned_cols=155 Identities=21% Similarity=0.390 Sum_probs=118.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-------CccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-------KSYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~y~aPE~~ 73 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+++.|+|||++
T Consensus 100 ~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~ 178 (338)
T cd07859 100 LTPEHHQFFLYQLLRALKYIHTAN-VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 178 (338)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHH
Confidence 467888899999999999999999 999999999999999999999999998754221 234678999999998
Q ss_pred cC--CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHh-------------------hhhh----ccc---cccccCCC
Q 019495 74 RT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR-------------------DRNL----QML---TDSCLEGQ 125 (340)
Q Consensus 74 ~~--~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~-------------------~~~~----~~~---~~~~~~~~ 125 (340)
.+ ..++.++|||||||++|+|++|+.||......... .... ..+ .+......
T Consensus 179 ~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 258 (338)
T cd07859 179 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQK 258 (338)
T ss_pred hccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHh
Confidence 75 56889999999999999999999888653221100 0000 000 00000000
Q ss_pred CCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 126 FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 126 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+ +..++.+.+++.+||+.||++||++.+++.
T Consensus 259 ~-~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 259 F-PNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred c-CCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 1 124567899999999999999999999985
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.1e-28 Score=212.70 Aligned_cols=154 Identities=20% Similarity=0.287 Sum_probs=123.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++.....++.||+.||.|||+++ ++||||||+||+++.++.++|+|||+++...... ...+++.|+|||++.
T Consensus 119 l~~~~~~~~~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 197 (280)
T cd05049 119 LTLSQLLQIAVQIASGMVYLASQH-FVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIM 197 (280)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhCC-eeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhc
Confidence 357788899999999999999999 9999999999999999999999999987543221 223467899999999
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
++.++.++||||||+++|||++ |..||.............. ......+...+..+.+++.+||+.||++||++.
T Consensus 198 ~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ 272 (280)
T cd05049 198 YRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQ-----GRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIK 272 (280)
T ss_pred cCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-----CCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHH
Confidence 8889999999999999999998 8888765433322221111 111223445668899999999999999999999
Q ss_pred HHHHHhc
Q 019495 154 SLVTALS 160 (340)
Q Consensus 154 ~i~~~L~ 160 (340)
+|++.|+
T Consensus 273 eil~~l~ 279 (280)
T cd05049 273 DIHERLQ 279 (280)
T ss_pred HHHHHhh
Confidence 9998875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.7e-29 Score=232.18 Aligned_cols=161 Identities=24% Similarity=0.380 Sum_probs=131.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCccc------cCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS------TNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~------~~~~y~aPE~~~ 74 (340)
|+..+.+.|+.||+.||+||-+.. +|||||..+|+||+++..|||+|||+++..-...-+. -..+||+||.+.
T Consensus 600 L~~~q~L~iA~QIAaGM~YLs~~~-FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIl 678 (774)
T KOG1026|consen 600 LSTSQFLHIATQIAAGMEYLSSHH-FVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESIL 678 (774)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCc-ccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhh
Confidence 466789999999999999999998 9999999999999999999999999998754443221 146899999999
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
.+++|.+||||||||++||+++ |+.|+.+.+.+..-. .+....+ ...|..|+..+..||..||+.+|.+||+|+
T Consensus 679 y~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe----~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~ 753 (774)
T KOG1026|consen 679 YGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIE----CIRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFK 753 (774)
T ss_pred cCcccchhhhhhhhhhhhhhhccccCcccccchHHHHH----HHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHH
Confidence 9999999999999999999998 555655543332211 1111122 356788999999999999999999999999
Q ss_pred HHHHHhcccccCCC
Q 019495 154 SLVTALSPLQKETE 167 (340)
Q Consensus 154 ~i~~~L~~~~~~~~ 167 (340)
+|-..|+.+....+
T Consensus 754 eI~~~L~~~~~~s~ 767 (774)
T KOG1026|consen 754 EIHSRLQAWAQASP 767 (774)
T ss_pred HHHHHHHHHHhcCc
Confidence 99999998865543
|
|
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-28 Score=217.92 Aligned_cols=149 Identities=22% Similarity=0.309 Sum_probs=120.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~ 77 (340)
++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....|++.|+|||++.+..
T Consensus 98 ~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 176 (323)
T cd05584 98 MEDTACFYLSEISLALEHLHQQG-IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSG 176 (323)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccccCCCccccChhhccCCC
Confidence 45667788999999999999999 999999999999999999999999998643222 2346889999999998888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC-----CH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP-----NP 152 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s~ 152 (340)
++.++|||||||++|||++|+.||............... ...++...+..+.+++.+||+.+|++|| ++
T Consensus 177 ~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 250 (323)
T cd05584 177 HGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKG------KLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDA 250 (323)
T ss_pred CCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCH
Confidence 899999999999999999999998765433222111111 1234555668899999999999999999 77
Q ss_pred HHHHH
Q 019495 153 KSLVT 157 (340)
Q Consensus 153 ~~i~~ 157 (340)
.+++.
T Consensus 251 ~~l~~ 255 (323)
T cd05584 251 AEVQS 255 (323)
T ss_pred HHHhc
Confidence 77765
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-28 Score=219.21 Aligned_cols=150 Identities=19% Similarity=0.309 Sum_probs=122.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....+++.|+|||++.+.
T Consensus 93 l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~ 171 (318)
T cd05570 93 FDEPRARFYAAEIVLGLQFLHERG-IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQ 171 (318)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCccccCHHHhcCC
Confidence 467888999999999999999999 999999999999999999999999988653211 234578999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH----
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP---- 152 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~---- 152 (340)
.++.++|+|||||++|+|++|+.||............... ...++...+..+.+++.+||+.||++||++
T Consensus 172 ~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~ 245 (318)
T cd05570 172 PYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED------EVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTG 245 (318)
T ss_pred CCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC------CCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCC
Confidence 8999999999999999999999998754433222211111 112344566889999999999999999999
Q ss_pred -HHHHH
Q 019495 153 -KSLVT 157 (340)
Q Consensus 153 -~~i~~ 157 (340)
.+++.
T Consensus 246 ~~~ll~ 251 (318)
T cd05570 246 EQDIKG 251 (318)
T ss_pred HHHHhc
Confidence 77764
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-28 Score=212.00 Aligned_cols=156 Identities=19% Similarity=0.248 Sum_probs=124.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
++|.+.+.++.||+.||.|||+++ ++||||||+||+++.++.++++|||.+....... ...++..|+|||++.+
T Consensus 104 l~~~~~~~~~~~i~~al~~lH~~~-iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 182 (266)
T cd05064 104 LVAGQLMGMLPGLASGMKYLSEMG-YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQY 182 (266)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EeeccccHhhEEEcCCCcEEECCCcccccccccchhcccCCCCceeecCHHHHhh
Confidence 478899999999999999999999 9999999999999999999999999866543221 1234568999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+.++.++|||||||++||+++ |..||.............. ......+..++..+.+++.+||+.+|++||++.+
T Consensus 183 ~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~ 257 (266)
T cd05064 183 HHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVED-----GFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQ 257 (266)
T ss_pred CCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHC-----CCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHH
Confidence 889999999999999999875 8888765433322111111 1122335556788999999999999999999999
Q ss_pred HHHHhccc
Q 019495 155 LVTALSPL 162 (340)
Q Consensus 155 i~~~L~~~ 162 (340)
|.+.|..+
T Consensus 258 i~~~l~~~ 265 (266)
T cd05064 258 IHSILSKM 265 (266)
T ss_pred HHHHHHhh
Confidence 99988654
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-28 Score=229.17 Aligned_cols=151 Identities=20% Similarity=0.248 Sum_probs=122.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
+++.+...++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ....||+.|+|||++.
T Consensus 166 l~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 244 (478)
T PTZ00267 166 FQEYEVGLLFYQIVLALDEVHSRK-MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWE 244 (478)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhC
Confidence 356677889999999999999999 999999999999999999999999998865432 2346899999999999
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+..++.++|||||||++|+|++|+.||.......+........ ...++..++..+.++|.+||..||++||++.+
T Consensus 245 ~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~-----~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~ 319 (478)
T PTZ00267 245 RKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGK-----YDPFPCPVSSGMKALLDPLLSKNPALRPTTQQ 319 (478)
T ss_pred CCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-----CCCCCccCCHHHHHHHHHHhccChhhCcCHHH
Confidence 8889999999999999999999999987644332222221111 11234455678999999999999999999999
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
++.
T Consensus 320 ~l~ 322 (478)
T PTZ00267 320 LLH 322 (478)
T ss_pred HHh
Confidence 864
|
|
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-28 Score=220.70 Aligned_cols=156 Identities=14% Similarity=0.229 Sum_probs=119.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.....++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|..|+|||++.+..
T Consensus 123 ~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~ 201 (364)
T cd07875 123 LDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201 (364)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEECCCCcEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCC
Confidence 356778889999999999999999 999999999999999999999999999865443 2346789999999999888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccc--------------------c---------c------
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS--------------------C---------L------ 122 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~--------------------~---------~------ 122 (340)
++.++|||||||++|+|++|+.||...............+..+ . .
T Consensus 202 ~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (364)
T cd07875 202 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFP 281 (364)
T ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCcccccc
Confidence 9999999999999999999999886542211111110000000 0 0
Q ss_pred -CCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 123 -EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 123 -~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
........+..+.+++.+|++.||.+|||+.+++.
T Consensus 282 ~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 282 ADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred ccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00011112457899999999999999999999986
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-28 Score=220.47 Aligned_cols=156 Identities=15% Similarity=0.199 Sum_probs=118.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.+|.+||+|||+++..... ....+|+.|+|||++.+..
T Consensus 120 ~~~~~~~~~~~qi~~~L~~LH~~~-ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~ 198 (359)
T cd07876 120 LDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMG 198 (359)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEecCCCccccccCccCCCCcccCCCCCchhccCCC
Confidence 356677889999999999999999 999999999999999999999999998764332 2346788999999999888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhh------------------cccc--ccccC--------------
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL------------------QMLT--DSCLE-------------- 123 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~------------------~~~~--~~~~~-------------- 123 (340)
++.++|||||||++|+|++|+.||............. .... .+...
T Consensus 199 ~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (359)
T cd07876 199 YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFP 278 (359)
T ss_pred CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccc
Confidence 9999999999999999999999886432110000000 0000 00000
Q ss_pred --CCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 124 --GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 124 --~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.......+..+.+++.+||+.||++|||+.+++.
T Consensus 279 ~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 279 SESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred cccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence 0011123467899999999999999999999985
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.1e-28 Score=213.14 Aligned_cols=155 Identities=23% Similarity=0.339 Sum_probs=123.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
+++.+.+.++.||+.||.|||+++ ++||||||+||+++.++.+|++|||+++..... ....++..|++||++.
T Consensus 121 ~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 199 (283)
T cd05090 121 LDHGDFLHIAIQIAAGMEYLSSHF-FVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIM 199 (283)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhcC-eehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhc
Confidence 357778899999999999999999 999999999999999999999999998764332 1233456799999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
++.++.++|+||||+++|||++ |..||.......+....... .....+..++..+.+++.+||+.||.+||++.
T Consensus 200 ~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ 274 (283)
T cd05090 200 YGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKR-----QLLPCSEDCPPRMYSLMTECWQEGPSRRPRFK 274 (283)
T ss_pred cCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-----CcCCCCCCCCHHHHHHHHHHcccCcccCcCHH
Confidence 8889999999999999999998 77777554332222211111 11123445668899999999999999999999
Q ss_pred HHHHHhcc
Q 019495 154 SLVTALSP 161 (340)
Q Consensus 154 ~i~~~L~~ 161 (340)
+|.+.|..
T Consensus 275 ~i~~~l~~ 282 (283)
T cd05090 275 DIHTRLRS 282 (283)
T ss_pred HHHHHhhc
Confidence 99988865
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.1e-28 Score=209.93 Aligned_cols=151 Identities=20% Similarity=0.345 Sum_probs=117.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCC-------eEEeccCCCccCCCCCccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN-------PRLSTFGLMKNSRDGKSYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~-------~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~ 73 (340)
+++.+++.++.||+.||.|||+++ |+||||||+||+++.++. ++++|||++..........++..|+|||++
T Consensus 102 ~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~ 180 (262)
T cd05077 102 LTTPWKFKVAKQLASALSYLEDKD-LVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQECVERIPWIAPECV 180 (262)
T ss_pred CCHHHHHHHHHHHHHHHHHhhhCC-eECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCcccccccccccChhhh
Confidence 467888999999999999999999 999999999999986664 899999998766555556678899999998
Q ss_pred cC-CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 74 RT-GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 74 ~~-~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
.. ..++.++|||||||++|||++ |..|+.......... ...... ......+..+.+++.+||+.||.+||+
T Consensus 181 ~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~li~~cl~~dp~~Rp~ 253 (262)
T cd05077 181 EDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER-----FYEGQC--MLVTPSCKELADLMTHCMNYDPNQRPF 253 (262)
T ss_pred cCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH-----HHhcCc--cCCCCChHHHHHHHHHHcCCChhhCcC
Confidence 74 568899999999999999984 666654432221111 000001 112234567999999999999999999
Q ss_pred HHHHHHHh
Q 019495 152 PKSLVTAL 159 (340)
Q Consensus 152 ~~~i~~~L 159 (340)
+.+|+..+
T Consensus 254 ~~~il~~~ 261 (262)
T cd05077 254 FRAIMRDI 261 (262)
T ss_pred HHHHHHhc
Confidence 99998765
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-28 Score=219.13 Aligned_cols=146 Identities=23% Similarity=0.273 Sum_probs=118.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....||+.|+|||++.+.
T Consensus 93 ~~~~~~~~~~~qi~~~l~~lH~~g-ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 171 (323)
T cd05575 93 FPEPRARFYAAEIASALGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQ 171 (323)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCChhhcChhhhcCC
Confidence 356777889999999999999999 999999999999999999999999998753221 234689999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
.++.++|||||||++|+|++|..||.......+....... ....+...+..+.+++.+||+.||.+||++.
T Consensus 172 ~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 172 PYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNK------PLRLKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 8999999999999999999999998765433332222211 1123344568899999999999999999985
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-28 Score=217.63 Aligned_cols=157 Identities=20% Similarity=0.287 Sum_probs=120.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--CccccCCcccCcccccCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTGRV 78 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~~ 78 (340)
+++.....++.|++.||.|||+++.|+||||||+||+++.++.+||+|||++...... ....+++.|+|||++.+..+
T Consensus 100 ~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~ 179 (331)
T cd06649 100 IPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY 179 (331)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccCCCCcCcCCHhHhcCCCC
Confidence 3567788999999999999998644999999999999999999999999998755433 23468899999999998889
Q ss_pred CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcc------------------------------------------
Q 019495 79 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM------------------------------------------ 116 (340)
Q Consensus 79 ~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~------------------------------------------ 116 (340)
+.++|||||||++|||++|+.||.......+.......
T Consensus 180 ~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
T cd06649 180 SVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDY 259 (331)
T ss_pred CchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHH
Confidence 99999999999999999999998643222111100000
Q ss_pred ccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 117 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 117 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+.............+.++.+++.+||+.||++|||+.++++
T Consensus 260 ~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~ 300 (331)
T cd06649 260 IVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMN 300 (331)
T ss_pred HHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000000011235678999999999999999999999985
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.6e-28 Score=209.84 Aligned_cols=156 Identities=22% Similarity=0.319 Sum_probs=124.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
+++.+++.++.|++.||.|||+.+ ++||||||+||+++.++.++++|||++....... ...++..|+|||++.+
T Consensus 100 ~~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 178 (261)
T cd05072 100 VLLPKLIDFSAQIAEGMAYIERKN-YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINF 178 (261)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEecCCCcEEECCCccceecCCCceeccCCCccceecCCHHHhcc
Confidence 356788899999999999999999 9999999999999999999999999987654332 1234567999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+.++.++|+||||+++|+|++ |..||............... ........++..+.+++.+||+.+|++||++++
T Consensus 179 ~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 253 (261)
T cd05072 179 GSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRG-----YRMPRMENCPDELYDIMKTCWKEKAEERPTFDY 253 (261)
T ss_pred CCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHHHHccCCcccCcCHHH
Confidence 888999999999999999998 88887654333222221111 111223345678999999999999999999999
Q ss_pred HHHHhccc
Q 019495 155 LVTALSPL 162 (340)
Q Consensus 155 i~~~L~~~ 162 (340)
+.+.|+.+
T Consensus 254 i~~~l~~~ 261 (261)
T cd05072 254 LQSVLDDF 261 (261)
T ss_pred HHHHHhcC
Confidence 99988753
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-28 Score=218.14 Aligned_cols=149 Identities=21% Similarity=0.285 Sum_probs=120.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC----CCccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~ 76 (340)
+++.+...++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++.... .....||+.|+|||++.+.
T Consensus 93 ~~~~~~~~~~~qi~~al~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 171 (316)
T cd05619 93 FDLPRATFYAAEIICGLQFLHSKG-IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQ 171 (316)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCCccccCHHHHcCC
Confidence 467788899999999999999999 99999999999999999999999999875321 1234689999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH-HH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK-SL 155 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~-~i 155 (340)
.++.++|+|||||++|+|++|+.||............... ...++...+..+.+++.+||+.||++||++. ++
T Consensus 172 ~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l 245 (316)
T cd05619 172 KYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD------NPCYPRWLTREAKDILVKLFVREPERRLGVKGDI 245 (316)
T ss_pred CCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHHHHHHHHHhccCHhhcCCChHHH
Confidence 8999999999999999999999998665433222111110 1123344567899999999999999999997 55
Q ss_pred H
Q 019495 156 V 156 (340)
Q Consensus 156 ~ 156 (340)
+
T Consensus 246 ~ 246 (316)
T cd05619 246 R 246 (316)
T ss_pred H
Confidence 4
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-28 Score=212.92 Aligned_cols=154 Identities=21% Similarity=0.259 Sum_probs=122.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
|++.+++.++.||+.||.|||+.+ ++||||||+||++++++.+||+|||++....... ...+++.|++||++.
T Consensus 119 l~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 197 (280)
T cd05092 119 LTLGQMLAIASQIASGMVYLASLH-FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL 197 (280)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCC-eecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhc
Confidence 467889999999999999999999 9999999999999999999999999986543221 223457899999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++|+|||||++|+|++ |..||.............. ......+..+++.+.+++.+||+.||.+||++.
T Consensus 198 ~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~ 272 (280)
T cd05092 198 YRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQ-----GRELERPRTCPPEVYAIMQGCWQREPQQRMVIK 272 (280)
T ss_pred cCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHc-----CccCCCCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence 8889999999999999999998 7777654322221111111 111233445668899999999999999999999
Q ss_pred HHHHHhc
Q 019495 154 SLVTALS 160 (340)
Q Consensus 154 ~i~~~L~ 160 (340)
+|...|+
T Consensus 273 ~l~~~l~ 279 (280)
T cd05092 273 DIHSRLQ 279 (280)
T ss_pred HHHHHHh
Confidence 9998875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-28 Score=215.43 Aligned_cols=160 Identities=24% Similarity=0.329 Sum_probs=121.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
++..+.-.++.|++.||+|||++| |+|||||.+|||||.+|.+||+|||+++...... +.+-|++|.+||++.|
T Consensus 215 ft~~qIKc~mkQLl~Gl~~cH~~g-vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG 293 (560)
T KOG0600|consen 215 FTEPQIKCYMKQLLEGLEYCHSRG-VLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLG 293 (560)
T ss_pred cChHHHHHHHHHHHHHHHHHhhcC-eeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcC
Confidence 356677889999999999999999 9999999999999999999999999999655432 3456899999999987
Q ss_pred C-CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhh-------------cccccc-ccCCCC---------CchhH
Q 019495 76 G-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL-------------QMLTDS-CLEGQF---------TDDDG 131 (340)
Q Consensus 76 ~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~-------------~~~~~~-~~~~~~---------~~~~~ 131 (340)
. .|+...|+||.|||+.||++|++.+++..--......+ ..++.. .+.+.. -...+
T Consensus 294 ~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~ 373 (560)
T KOG0600|consen 294 ATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFP 373 (560)
T ss_pred CcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCC
Confidence 4 69999999999999999999998876642211111110 011100 001010 12245
Q ss_pred HHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 019495 132 TELVRLASRCLQYEPRERPNPKSLVTALSPLQ 163 (340)
Q Consensus 132 ~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~ 163 (340)
....+|+..+|..||++|.|+.+++. ..++
T Consensus 374 ~~~l~Ll~~lL~ldP~kR~tA~~aL~--seyF 403 (560)
T KOG0600|consen 374 ASALDLLEKLLSLDPDKRGTASSALQ--SEYF 403 (560)
T ss_pred HHHHHHHHHHhccCccccccHHHHhc--Cccc
Confidence 78899999999999999999999885 4444
|
|
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.7e-28 Score=211.62 Aligned_cols=154 Identities=19% Similarity=0.331 Sum_probs=123.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
++|..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++...... ...++..|+|||.+.
T Consensus 116 ~~~~~~~~~~~~i~~~l~~lH~~~-i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 194 (277)
T cd05032 116 PTLQKFIQMAAEIADGMAYLAAKK-FVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLK 194 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-ccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHh
Confidence 367788999999999999999999 9999999999999999999999999987543321 223467899999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
++.++.++||||||+++||+++ |..|+............. .......+..++..+.+++.+||+.+|++|||+.
T Consensus 195 ~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ 269 (277)
T cd05032 195 DGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI-----DGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFL 269 (277)
T ss_pred cCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh-----cCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHH
Confidence 8889999999999999999998 877776543322221111 1112234455678999999999999999999999
Q ss_pred HHHHHhc
Q 019495 154 SLVTALS 160 (340)
Q Consensus 154 ~i~~~L~ 160 (340)
+++..|+
T Consensus 270 ~l~~~l~ 276 (277)
T cd05032 270 EIVSSLK 276 (277)
T ss_pred HHHHHhc
Confidence 9998876
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.2e-28 Score=212.43 Aligned_cols=153 Identities=18% Similarity=0.293 Sum_probs=121.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCcccccC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~ 75 (340)
+|...+.++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++...... ...++..|+|||++.+
T Consensus 117 ~~~~~~~~~~~l~~~l~~lH~~~-~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 195 (277)
T cd05062 117 SLKKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD 195 (277)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC-cccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhc
Confidence 56778899999999999999999 9999999999999999999999999987543322 1234678999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+.++.++|+||||+++|||++ |..||............... .....+..++..+.+++.+||+.+|++||++.+
T Consensus 196 ~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e 270 (277)
T cd05062 196 GVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEG-----GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLE 270 (277)
T ss_pred CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-----CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 889999999999999999999 56666554332222111111 111234456678999999999999999999999
Q ss_pred HHHHhc
Q 019495 155 LVTALS 160 (340)
Q Consensus 155 i~~~L~ 160 (340)
++..|+
T Consensus 271 ~l~~l~ 276 (277)
T cd05062 271 IISSIK 276 (277)
T ss_pred HHHHhh
Confidence 998775
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-28 Score=210.88 Aligned_cols=156 Identities=17% Similarity=0.249 Sum_probs=124.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc-------cccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-------YSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~-------~~~~~~y~aPE~~ 73 (340)
+++.++++++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++........ ..++..|+|||++
T Consensus 92 ~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 170 (257)
T cd05115 92 ITVSNVVELMHQVSMGMKYLEGKN-FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECI 170 (257)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcC-eeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHH
Confidence 477889999999999999999999 99999999999999999999999999875433221 1124679999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.++.++.++|+||||+++|++++ |..||............ ........+..++.++.+++.+||+.+|++||++
T Consensus 171 ~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~ 245 (257)
T cd05115 171 NFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFI-----EQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNF 245 (257)
T ss_pred ccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH-----HCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence 88888999999999999999996 88887654332221111 1111223455667899999999999999999999
Q ss_pred HHHHHHhccc
Q 019495 153 KSLVTALSPL 162 (340)
Q Consensus 153 ~~i~~~L~~~ 162 (340)
.+|.+.|+.+
T Consensus 246 ~~i~~~l~~~ 255 (257)
T cd05115 246 AKVEERMRTY 255 (257)
T ss_pred HHHHHHHhhh
Confidence 9999988765
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-28 Score=219.46 Aligned_cols=147 Identities=22% Similarity=0.245 Sum_probs=118.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC----CCccccCCcccCcccccCCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~ 77 (340)
++.....++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++.... .....||+.|+|||++.+..
T Consensus 94 ~~~~~~~~~~qi~~~L~~lH~~g-iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 172 (325)
T cd05602 94 LEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQP 172 (325)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCC
Confidence 34566678999999999999999 99999999999999999999999999875322 22456899999999999888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i 155 (340)
++.++|||||||++|+|++|..||............... ...++...+..+.+++.+||+.||.+||++.+.
T Consensus 173 ~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~ 244 (325)
T cd05602 173 YDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK------PLQLKPNITNSARHLLEGLLQKDRTKRLGAKDD 244 (325)
T ss_pred CCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC------CcCCCCCCCHHHHHHHHHHcccCHHHCCCCCCC
Confidence 999999999999999999999998765433322221111 112334566889999999999999999998753
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-28 Score=220.35 Aligned_cols=154 Identities=21% Similarity=0.273 Sum_probs=118.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-----CccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~ 75 (340)
+++.+...++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....||+.|+|||++.+
T Consensus 102 ~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 180 (332)
T cd05614 102 FSEDEVRFYSGEIILALEHLHKLG-IVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRG 180 (332)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcC
Confidence 467788889999999999999999 999999999999999999999999998754322 23468999999999986
Q ss_pred C-CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC----
Q 019495 76 G-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP---- 150 (340)
Q Consensus 76 ~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp---- 150 (340)
. .++.++|||||||++|||++|..||...............+.. ....++...+..+.+++.+||+.||++||
T Consensus 181 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~ 258 (332)
T cd05614 181 KGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK--CDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGP 258 (332)
T ss_pred CCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCC
Confidence 4 4788999999999999999999988532111000000011110 12234455678899999999999999999
Q ss_pred -CHHHHHH
Q 019495 151 -NPKSLVT 157 (340)
Q Consensus 151 -s~~~i~~ 157 (340)
++++++.
T Consensus 259 ~~~~~~l~ 266 (332)
T cd05614 259 QGASEIKE 266 (332)
T ss_pred CCHHHHHc
Confidence 6667764
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=207.64 Aligned_cols=154 Identities=27% Similarity=0.383 Sum_probs=125.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++++|||.+...... ....++..|+|||.+.
T Consensus 102 ~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 180 (262)
T cd00192 102 LSLKDLLSFAIQIAKGMEYLASKK-FVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLK 180 (262)
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCC-cccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhc
Confidence 478899999999999999999999 999999999999999999999999998876543 2334578899999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++|+||+|+++|+|++ |..||.............. ......+..++.++.+++.+||..+|++|||+.
T Consensus 181 ~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 255 (262)
T cd00192 181 DGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK-----GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFS 255 (262)
T ss_pred cCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-----CCCCCCCccCChHHHHHHHHHccCCcccCcCHH
Confidence 8889999999999999999999 5777765433222221111 112234555678999999999999999999999
Q ss_pred HHHHHhc
Q 019495 154 SLVTALS 160 (340)
Q Consensus 154 ~i~~~L~ 160 (340)
+++..|+
T Consensus 256 ~l~~~l~ 262 (262)
T cd00192 256 ELVERLE 262 (262)
T ss_pred HHHHhhC
Confidence 9998764
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-27 Score=208.54 Aligned_cols=155 Identities=23% Similarity=0.327 Sum_probs=124.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++++|||++....... ...++..|+|||++.+
T Consensus 99 ~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 177 (260)
T cd05070 99 LKLPNLVDMAAQVAAGMAYIERMN-YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 177 (260)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccccChHHHhc
Confidence 467889999999999999999999 9999999999999999999999999987644321 1234567999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
..++.++|+||||+++|+|++ |..||............. .......+...+..+.+++.+||..+|++|||+.+
T Consensus 178 ~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 252 (260)
T cd05070 178 GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVE-----RGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEY 252 (260)
T ss_pred CCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-----cCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHH
Confidence 889999999999999999999 777776543322222111 11122334556788999999999999999999999
Q ss_pred HHHHhcc
Q 019495 155 LVTALSP 161 (340)
Q Consensus 155 i~~~L~~ 161 (340)
+...|+.
T Consensus 253 l~~~l~~ 259 (260)
T cd05070 253 LQSFLED 259 (260)
T ss_pred HHHHHhc
Confidence 9998875
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.7e-29 Score=215.61 Aligned_cols=153 Identities=28% Similarity=0.467 Sum_probs=118.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
+++.+++.|+.||+.||.|||+++ ++|++|+++||+++.++.+||+|||+....... ........|+|||++.
T Consensus 100 ~~~~~~~~i~~~i~~~l~~Lh~~~-iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 178 (259)
T PF07714_consen 100 LSEQQRLSIAIQIAEALSYLHSNN-IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLK 178 (259)
T ss_dssp SBHHHHHHHHHHHHHHHHHHHHTT-EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHH
T ss_pred cccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 478899999999999999999999 999999999999999999999999998876322 1223567899999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++||||||+++||+++ |+.|+.......+...... ......+..++..+.+++..||..+|++||++.
T Consensus 179 ~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~ 253 (259)
T PF07714_consen 179 DGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQ-----GQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQ 253 (259)
T ss_dssp HSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHT-----TEETTSBTTSBHHHHHHHHHHT-SSGGGS--HH
T ss_pred cccccccccccccccccccccccccccccccccccccccccc-----cccceeccchhHHHHHHHHHHcCCChhhCcCHH
Confidence 8889999999999999999999 5677655433322222211 112234455678899999999999999999999
Q ss_pred HHHHHh
Q 019495 154 SLVTAL 159 (340)
Q Consensus 154 ~i~~~L 159 (340)
+|++.|
T Consensus 254 ~i~~~L 259 (259)
T PF07714_consen 254 EILQEL 259 (259)
T ss_dssp HHHHHH
T ss_pred HHHhcC
Confidence 999865
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.4e-28 Score=218.81 Aligned_cols=153 Identities=17% Similarity=0.226 Sum_probs=117.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccC--
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRT-- 75 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~-- 75 (340)
++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....||..|+|||++..
T Consensus 166 ~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 244 (353)
T PLN00034 166 DEQFLADVARQILSGIAYLHRRH-IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDL 244 (353)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccCccccCcccccccc
Confidence 35567789999999999999999 999999999999999999999999998765432 24568999999998853
Q ss_pred ---CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 76 ---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 76 ---~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
...+.++|||||||++|||++|+.||.......+..... ... .......+..++..+.++|.+||+.||++||++
T Consensus 245 ~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~ 322 (353)
T PLN00034 245 NHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMC-AIC-MSQPPEAPATASREFRHFISCCLQREPAKRWSA 322 (353)
T ss_pred ccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHH-HHh-ccCCCCCCCccCHHHHHHHHHHccCChhhCcCH
Confidence 224568999999999999999999986322111111000 000 011222344566889999999999999999999
Q ss_pred HHHHH
Q 019495 153 KSLVT 157 (340)
Q Consensus 153 ~~i~~ 157 (340)
.+++.
T Consensus 323 ~ell~ 327 (353)
T PLN00034 323 MQLLQ 327 (353)
T ss_pred HHHhc
Confidence 99986
|
|
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-28 Score=217.60 Aligned_cols=149 Identities=17% Similarity=0.305 Sum_probs=116.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC----CCccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~ 76 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++.... .....||+.|+|||++.+.
T Consensus 93 l~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 171 (329)
T cd05618 93 LPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGE 171 (329)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCCccccCHHHHcCC
Confidence 467788899999999999999999 99999999999999999999999999875321 1235689999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHH-----HhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
.++.++|+|||||++|+|++|+.||....... ........+.. ....+|...+..+.+++.+||+.||++||+
T Consensus 172 ~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~ 249 (329)
T cd05618 172 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRSLSVKAASVLKSFLNKDPKERLG 249 (329)
T ss_pred CCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc--CCCCCCCCCCHHHHHHHHHHhcCCHHHcCC
Confidence 89999999999999999999999884211000 00000011111 112345566788999999999999999998
Q ss_pred H
Q 019495 152 P 152 (340)
Q Consensus 152 ~ 152 (340)
+
T Consensus 250 ~ 250 (329)
T cd05618 250 C 250 (329)
T ss_pred C
Confidence 4
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.3e-28 Score=213.34 Aligned_cols=158 Identities=19% Similarity=0.302 Sum_probs=126.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++.+.+.++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++...... ...++..|++||++.
T Consensus 124 l~~~~~~~i~~~i~~~l~~LH~~~-ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~ 202 (290)
T cd05045 124 LTMGDLISFAWQISRGMQYLAEMK-LVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLF 202 (290)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCC-eehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHc
Confidence 467888999999999999999999 9999999999999999999999999987543221 123456899999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++||||||+++|+|++ |..||.......+.... ........+..++..+.+++.+||+.+|++||++.
T Consensus 203 ~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~ 277 (290)
T cd05045 203 DHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLL-----KTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFA 277 (290)
T ss_pred cCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH-----hCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHH
Confidence 8888999999999999999998 88777654433222111 11122233455668899999999999999999999
Q ss_pred HHHHHhccccc
Q 019495 154 SLVTALSPLQK 164 (340)
Q Consensus 154 ~i~~~L~~~~~ 164 (340)
+++..|+.+..
T Consensus 278 ~i~~~l~~~~~ 288 (290)
T cd05045 278 DISKELEKMMV 288 (290)
T ss_pred HHHHHHHHHHh
Confidence 99999988753
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=208.48 Aligned_cols=155 Identities=23% Similarity=0.327 Sum_probs=124.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
++|..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||.+....... ...++..|++||++.+
T Consensus 99 ~~~~~~~~~~~~l~~al~~lH~~~-i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~ 177 (260)
T cd05069 99 LKLPQLVDMAAQIADGMAYIERMN-YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 177 (260)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhcc
Confidence 367888999999999999999999 9999999999999999999999999987653321 1234567999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+.++.++|+||||+++|+|++ |..||............... .....+...+..+.+++.+||+.+|++||++.+
T Consensus 178 ~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 252 (260)
T cd05069 178 GRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG-----YRMPCPQGCPESLHELMKLCWKKDPDERPTFEY 252 (260)
T ss_pred CCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCcccCHHHHHHHHHHccCCcccCcCHHH
Confidence 889999999999999999999 77777654433222221111 112234456688999999999999999999999
Q ss_pred HHHHhcc
Q 019495 155 LVTALSP 161 (340)
Q Consensus 155 i~~~L~~ 161 (340)
|++.|+.
T Consensus 253 i~~~l~~ 259 (260)
T cd05069 253 IQSFLED 259 (260)
T ss_pred HHHHHhc
Confidence 9998875
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-28 Score=210.91 Aligned_cols=159 Identities=18% Similarity=0.230 Sum_probs=125.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ ++|+||||+||+++.++.++++|||++....... ...+++.|+|||.+.+.
T Consensus 103 ~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~ 181 (267)
T cd08228 103 IPERTVWKYFVQLCSAVEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHEN 181 (267)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCCHHHEEEcCCCCEEECccccceeccchhHHHhcCCCCccccChhhhccC
Confidence 356678899999999999999999 9999999999999999999999999887654322 34578899999999888
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++|+||||+++|+|++|+.|+........... ..+.........+...+..+.+++.+||+.+|++||++.+|+
T Consensus 182 ~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl 259 (267)
T cd08228 182 GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLC--QKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVH 259 (267)
T ss_pred CCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHH--HHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHH
Confidence 889999999999999999999998765422111100 111111111112234557899999999999999999999999
Q ss_pred HHhccc
Q 019495 157 TALSPL 162 (340)
Q Consensus 157 ~~L~~~ 162 (340)
..|+++
T Consensus 260 ~~~~~~ 265 (267)
T cd08228 260 QIAKQM 265 (267)
T ss_pred HHHHHh
Confidence 998876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.6e-28 Score=210.28 Aligned_cols=157 Identities=20% Similarity=0.267 Sum_probs=122.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.+++.++.|++.||.|||+.+ ++||||||+||+++.++.+|++|||++...... .....+..|+|||++.+..
T Consensus 109 l~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~ 187 (270)
T cd05047 109 LSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSV 187 (270)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EeecccccceEEEcCCCeEEECCCCCccccchhhhccCCCCccccCChHHHccCC
Confidence 467888999999999999999999 999999999999999999999999987532211 1122356799999998888
Q ss_pred CCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
++.++|+||||+++|||++ |..||............ ........+..++..+.+++.+||+.+|.+|||+.+++
T Consensus 188 ~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il 262 (270)
T cd05047 188 YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL-----PQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 262 (270)
T ss_pred CCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHH-----hCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHH
Confidence 8999999999999999997 88887543322211111 11111223344567899999999999999999999999
Q ss_pred HHhcccc
Q 019495 157 TALSPLQ 163 (340)
Q Consensus 157 ~~L~~~~ 163 (340)
..|..+.
T Consensus 263 ~~l~~~~ 269 (270)
T cd05047 263 VSLNRML 269 (270)
T ss_pred HHHHHhh
Confidence 9987753
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.4e-28 Score=209.11 Aligned_cols=156 Identities=21% Similarity=0.316 Sum_probs=124.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCcc-------ccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY-------STNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-------~~~~~y~aPE~~ 73 (340)
+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++........ .++..|+|||++
T Consensus 92 ~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 170 (257)
T cd05060 92 IPVSDLKELAHQVAMGMAYLESKH-FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECI 170 (257)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcC-eeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHh
Confidence 467889999999999999999999 999999999999999999999999998765433221 123579999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.+..++.++|+||||+++|++++ |..||........... .. .......+..++..+.+++.+||+.+|++||++
T Consensus 171 ~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~ 245 (257)
T cd05060 171 NYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAM-LE----SGERLPRPEECPQEIYSIMLSCWKYRPEDRPTF 245 (257)
T ss_pred cCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHH-HH----cCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCH
Confidence 88889999999999999999998 8877754322211111 11 111223445566889999999999999999999
Q ss_pred HHHHHHhccc
Q 019495 153 KSLVTALSPL 162 (340)
Q Consensus 153 ~~i~~~L~~~ 162 (340)
.++++.|+.+
T Consensus 246 ~~l~~~l~~~ 255 (257)
T cd05060 246 SELESTFRRD 255 (257)
T ss_pred HHHHHHHHhc
Confidence 9999999876
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=205.06 Aligned_cols=153 Identities=22% Similarity=0.305 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCC-CC---CccccCCcccCcccccCC-CC
Q 019495 4 AMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR-DG---KSYSTNLAFTPPEYLRTG-RV 78 (340)
Q Consensus 4 ~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~-~~---~~~~~~~~y~aPE~~~~~-~~ 78 (340)
.....++.||+.||+|||+.+ |+||||||.||+|+++|.+||+|||+++... +. +.-..|.+|.|||++.+. .|
T Consensus 120 ~~ik~~m~Qll~gl~~~H~~~-IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Y 198 (323)
T KOG0594|consen 120 RLIKSFMRQLLRGLAFLHSHG-ILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSY 198 (323)
T ss_pred HHHHHHHHHHHHHHHHHHhCC-eecccCCcceEEECCCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcC
Confidence 457789999999999999999 9999999999999999999999999998665 22 233578999999999876 69
Q ss_pred CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccc----------------ccCCCC-Cch-------hHHHH
Q 019495 79 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS----------------CLEGQF-TDD-------DGTEL 134 (340)
Q Consensus 79 ~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~-~~~-------~~~~l 134 (340)
+...||||+|||+.||++++..|++..........+..+-.+ .+.... +.. .....
T Consensus 199 s~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~ 278 (323)
T KOG0594|consen 199 STSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDG 278 (323)
T ss_pred CCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccH
Confidence 999999999999999999999998753322211111111100 000000 111 12478
Q ss_pred HHHHHHhhccCCCCCCCHHHHHH
Q 019495 135 VRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 135 ~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.+++.+|++.+|.+|.|+..++.
T Consensus 279 ~dll~~~L~y~p~~R~Sa~~al~ 301 (323)
T KOG0594|consen 279 IELLSKLLQYDPAKRISAKGALT 301 (323)
T ss_pred HHHHHHHhccCcccCcCHHHHhc
Confidence 99999999999999999999886
|
|
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=207.44 Aligned_cols=156 Identities=21% Similarity=0.315 Sum_probs=124.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc--cc---cCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--YS---TNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~--~~---~~~~y~aPE~~~~ 75 (340)
++|..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++....... .. .+..|+|||++.+
T Consensus 100 ~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 178 (261)
T cd05068 100 LKLPQLIDMAAQVASGMAYLEAQN-YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALY 178 (261)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCcccccc
Confidence 468889999999999999999999 99999999999999999999999999876543221 11 2357999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
..++.++|+||||+++|+|++ |+.||............... .....+..++..+.+++.+||+.+|++||++.+
T Consensus 179 ~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~ 253 (261)
T cd05068 179 NRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG-----YRMPCPPGCPKELYDIMLDCWKEDPDDRPTFET 253 (261)
T ss_pred CCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-----CCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHH
Confidence 889999999999999999999 88777654332222111111 111234455688999999999999999999999
Q ss_pred HHHHhccc
Q 019495 155 LVTALSPL 162 (340)
Q Consensus 155 i~~~L~~~ 162 (340)
+...|+.+
T Consensus 254 l~~~l~~~ 261 (261)
T cd05068 254 LQWKLEDF 261 (261)
T ss_pred HHHHHhcC
Confidence 99988753
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=214.11 Aligned_cols=158 Identities=23% Similarity=0.349 Sum_probs=125.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----cc--ccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SY--STNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~--~~~~~y~aPE~~~ 74 (340)
++|.+.+.++.||+.||.|||+++ ++||||||+||+++.++.+||+|||.++...... .. .++..|++||++.
T Consensus 131 l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 209 (314)
T cd05099 131 LSFKDLVSCAYQVARGMEYLESRR-CIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALF 209 (314)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCC-eeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHc
Confidence 467888999999999999999999 9999999999999999999999999987654321 11 2345799999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
++.++.++|+||||+++|+|++ |..||.............. ......+..++..+.+++.+||+.+|++||++.
T Consensus 210 ~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 284 (314)
T cd05099 210 DRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLRE-----GHRMDKPSNCTHELYMLMRECWHAVPTQRPTFK 284 (314)
T ss_pred cCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHH
Confidence 8889999999999999999999 7777755433222211111 111233455667899999999999999999999
Q ss_pred HHHHHhccccc
Q 019495 154 SLVTALSPLQK 164 (340)
Q Consensus 154 ~i~~~L~~~~~ 164 (340)
++++.|..+..
T Consensus 285 ~ll~~l~~~~~ 295 (314)
T cd05099 285 QLVEALDKVLA 295 (314)
T ss_pred HHHHHHHHHHH
Confidence 99999988754
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-28 Score=219.72 Aligned_cols=153 Identities=24% Similarity=0.280 Sum_probs=121.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC---------------------
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--------------------- 59 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~--------------------- 59 (340)
+++.+...++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 98 l~~~~~~~i~~qi~~aL~~LH~~g-iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (350)
T cd05573 98 FPEETARFYIAELVLALDSVHKLG-FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVR 176 (350)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccccccccccccccccccc
Confidence 466788899999999999999999 9999999999999999999999999987644322
Q ss_pred ------------ccccCCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCC
Q 019495 60 ------------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 127 (340)
Q Consensus 60 ------------~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (340)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||............... . ........
T Consensus 177 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~-~-~~~~~p~~ 254 (350)
T cd05573 177 RRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINW-K-ESLRFPPD 254 (350)
T ss_pred ccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhcc-C-CcccCCCC
Confidence 345789999999999888999999999999999999999998765433222221110 0 01111111
Q ss_pred chhHHHHHHHHHHhhccCCCCCCC-HHHHHH
Q 019495 128 DDDGTELVRLASRCLQYEPRERPN-PKSLVT 157 (340)
Q Consensus 128 ~~~~~~l~~li~~cl~~~p~~Rps-~~~i~~ 157 (340)
...++.+.++|.+|+. ||.+||+ +.+++.
T Consensus 255 ~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 255 PPVSPEAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred CCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 2246889999999997 9999999 999986
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-28 Score=219.65 Aligned_cols=147 Identities=24% Similarity=0.305 Sum_probs=120.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ....|++.|+|||++.+.
T Consensus 95 l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~ 173 (318)
T cd05582 95 FTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 173 (318)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCC
Confidence 467888999999999999999999 999999999999999999999999998765433 234678999999999888
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
.++.++|||||||++|+|++|+.||............... ...++...+..+.+++.+||+.||++||++.+
T Consensus 174 ~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 174 GHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKA------KLGMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 8899999999999999999999998754433222221111 11234456688999999999999999999655
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=208.04 Aligned_cols=157 Identities=24% Similarity=0.325 Sum_probs=124.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
++|..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||.++...... ...++..|++||++.+
T Consensus 99 ~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~ 177 (262)
T cd05071 99 LRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 177 (262)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcccEEEcCCCcEEeccCCceeeccccccccccCCcccceecCHhHhcc
Confidence 467888999999999999999999 9999999999999999999999999987554332 1234567999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+.++.++|+||||+++|+|++ |..||............... .....+..++..+.+++.+||+.+|++||++.+
T Consensus 178 ~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~ 252 (262)
T cd05071 178 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-----YRMPCPPECPESLHDLMCQCWRKEPEERPTFEY 252 (262)
T ss_pred CCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcC-----CCCCCccccCHHHHHHHHHHccCCcccCCCHHH
Confidence 889999999999999999999 66666554332222211111 111223456688999999999999999999999
Q ss_pred HHHHhcccc
Q 019495 155 LVTALSPLQ 163 (340)
Q Consensus 155 i~~~L~~~~ 163 (340)
+.+.|+.+.
T Consensus 253 ~~~~l~~~~ 261 (262)
T cd05071 253 LQAFLEDYF 261 (262)
T ss_pred HHHHHHHhc
Confidence 999988753
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.8e-28 Score=216.93 Aligned_cols=154 Identities=16% Similarity=0.311 Sum_probs=119.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC----CCccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~ 76 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++.... .....||+.|+|||++.+.
T Consensus 93 l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 171 (329)
T cd05588 93 LPEEHARFYSAEISLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGE 171 (329)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCCccccCHHHHcCC
Confidence 467888999999999999999999 99999999999999999999999999874221 1245689999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHH-----HhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
.++.++|+|||||++|+|++|+.||....... ........+... ...+|..++..+.+++.+||+.||.+|++
T Consensus 172 ~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~ 249 (329)
T cd05588 172 DYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK--QIRIPRSLSVKASSVLKGFLNKDPKERLG 249 (329)
T ss_pred CCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhccCHHHcCC
Confidence 89999999999999999999999885311100 000000111111 12345556788999999999999999997
Q ss_pred ------HHHHHH
Q 019495 152 ------PKSLVT 157 (340)
Q Consensus 152 ------~~~i~~ 157 (340)
+.+++.
T Consensus 250 ~~~~~~~~~i~~ 261 (329)
T cd05588 250 CHPQTGFRDIKS 261 (329)
T ss_pred CCCCCCHHHHhc
Confidence 556653
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-28 Score=214.30 Aligned_cols=156 Identities=20% Similarity=0.335 Sum_probs=118.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccC-
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRT- 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~- 75 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+++.|+|||++.+
T Consensus 100 ~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 178 (288)
T cd07871 100 MSMHNVKIFMFQLLRGLSYCHKRK-ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGS 178 (288)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCceecccccChHHhcCC
Confidence 356778889999999999999999 999999999999999999999999998754322 23456889999999875
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccc--------------------ccccCC----CCCchhH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT--------------------DSCLEG----QFTDDDG 131 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~----~~~~~~~ 131 (340)
..++.++||||+||++|+|++|+.||................. -+.... ......+
T Consensus 179 ~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (288)
T cd07871 179 TEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLD 258 (288)
T ss_pred cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCC
Confidence 4588999999999999999999999876433221111100000 000000 0112345
Q ss_pred HHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 132 TELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 132 ~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
..+.+++.+|++.||.+|||+.+++.
T Consensus 259 ~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 259 TDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred HHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 78899999999999999999999974
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-28 Score=219.34 Aligned_cols=147 Identities=20% Similarity=0.253 Sum_probs=119.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC----CCccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++.... .....|++.|+|||++.+.
T Consensus 93 ~~~~~~~~~~~qi~~al~~lH~~g-ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 171 (325)
T cd05604 93 FPEPRARFYAAEIASALGYLHSIN-IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQ 171 (325)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCC
Confidence 457788899999999999999999 99999999999999999999999999875322 1234689999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
.++.++|||||||++|+|++|..||.......+....... ....++..+..+.+++.+|++.+|.+||++.+
T Consensus 172 ~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 172 PYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHK------PLVLRPGASLTAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred CCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcC------CccCCCCCCHHHHHHHHHHhccCHHhcCCCCC
Confidence 8999999999999999999999998765433332222211 11223345678999999999999999998864
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-27 Score=214.43 Aligned_cols=160 Identities=23% Similarity=0.332 Sum_probs=127.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
++|.+++.++.||+.||.|||+++ ++||||||+||+++.++.+||+|||+++...... ...++..|+|||++.
T Consensus 131 l~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 209 (334)
T cd05100 131 LTFKDLVSCAYQVARGMEYLASQK-CIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALF 209 (334)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhc
Confidence 467888999999999999999999 9999999999999999999999999987654322 112346799999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++||||||+++|||++ |..||.............. ......+..++..+.+++.+||+.+|++||++.
T Consensus 210 ~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 284 (334)
T cd05100 210 DRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKE-----GHRMDKPANCTHELYMIMRECWHAVPSQRPTFK 284 (334)
T ss_pred cCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHHHHHHHHHcccChhhCcCHH
Confidence 8889999999999999999998 7777765433322221111 112233445667899999999999999999999
Q ss_pred HHHHHhcccccCC
Q 019495 154 SLVTALSPLQKET 166 (340)
Q Consensus 154 ~i~~~L~~~~~~~ 166 (340)
+++..|..+....
T Consensus 285 ell~~l~~~~~~~ 297 (334)
T cd05100 285 QLVEDLDRVLTVT 297 (334)
T ss_pred HHHHHHHHHhhhc
Confidence 9999999887543
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.4e-28 Score=209.59 Aligned_cols=156 Identities=24% Similarity=0.268 Sum_probs=120.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC--------ccccCCcccCcccc
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--------SYSTNLAFTPPEYL 73 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~--------~~~~~~~y~aPE~~ 73 (340)
++...+.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++...... ...++..|+|||++
T Consensus 96 ~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 174 (262)
T cd05058 96 TVKDLIGFGLQVAKGMEYLASKK-FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESL 174 (262)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHh
Confidence 46677889999999999999999 9999999999999999999999999987543211 22345679999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCC-CCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHI-PPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.+..++.++||||||+++|||++|+.| +.......+....... .....+..++..+.+++.+||..+|++||++
T Consensus 175 ~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~ 249 (262)
T cd05058 175 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQG-----RRLLQPEYCPDPLYEVMLSCWHPKPEMRPTF 249 (262)
T ss_pred ccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC-----CCCCCCCcCCHHHHHHHHHHcCCChhhCCCH
Confidence 888899999999999999999996544 4432222211111111 1112233345789999999999999999999
Q ss_pred HHHHHHhcccc
Q 019495 153 KSLVTALSPLQ 163 (340)
Q Consensus 153 ~~i~~~L~~~~ 163 (340)
.+|+..|+.+.
T Consensus 250 ~~il~~l~~~~ 260 (262)
T cd05058 250 SELVSRIEQIF 260 (262)
T ss_pred HHHHHHHHHHh
Confidence 99999988764
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.2e-28 Score=213.66 Aligned_cols=160 Identities=20% Similarity=0.272 Sum_probs=124.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.+++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++...... .....+..|++||++.+..
T Consensus 121 l~~~~~~~~~~qi~~al~~LH~~g-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 199 (303)
T cd05088 121 LSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSV 199 (303)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEecCCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccC
Confidence 367788999999999999999999 999999999999999999999999998643211 1112356799999998778
Q ss_pred CCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
++.++|||||||++|||+| |..||............ ........+...+..+.+++.+||+.+|++||++.+++
T Consensus 200 ~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 274 (303)
T cd05088 200 YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL-----PQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 274 (303)
T ss_pred CcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHH-----hcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 8999999999999999998 88877544332221111 11112223344567899999999999999999999999
Q ss_pred HHhcccccCC
Q 019495 157 TALSPLQKET 166 (340)
Q Consensus 157 ~~L~~~~~~~ 166 (340)
..|..+....
T Consensus 275 ~~l~~~~~~~ 284 (303)
T cd05088 275 VSLNRMLEER 284 (303)
T ss_pred HHHHHHHHhh
Confidence 9888765543
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6e-28 Score=212.13 Aligned_cols=155 Identities=16% Similarity=0.261 Sum_probs=119.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC---ccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~~~ 77 (340)
+++...+.++.||+.||.|||+.+ |+||||||+||+++.++.++|+|||++....... ...++..|+|||++.+..
T Consensus 92 ~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 170 (277)
T cd05607 92 LEMERVIHYSAQITCGILHLHSMD-IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEP 170 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCCccCHHHHccCC
Confidence 356778899999999999999999 9999999999999999999999999987654432 345788999999998888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
++.++|+||+||++|+|++|+.||...................... ......+.++.+++.+||+.||++||++.++++
T Consensus 171 ~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 171 YSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVK-FEHQNFTEESKDICRLFLAKKPEDRLGSREKND 249 (277)
T ss_pred CCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccc-cccccCCHHHHHHHHHHhccCHhhCCCCccchh
Confidence 9999999999999999999999886532211111111111111111 011235678999999999999999999977653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-27 Score=210.67 Aligned_cols=154 Identities=19% Similarity=0.306 Sum_probs=121.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC---CeEEeccCCCccCCCCC------ccccCCcccCcc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG---NPRLSTFGLMKNSRDGK------SYSTNLAFTPPE 71 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~---~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE 71 (340)
++|...+.++.||+.||.|||+++ ++||||||+||+++.++ .+||+|||+++...... ....+..|+|||
T Consensus 113 ~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE 191 (277)
T cd05036 113 LTMKDLLFCARDVAKGCKYLEENH-FIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPE 191 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHH
Confidence 467889999999999999999999 99999999999998654 58999999987653221 112245799999
Q ss_pred cccCCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC
Q 019495 72 YLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150 (340)
Q Consensus 72 ~~~~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 150 (340)
++.+..++.++|||||||++|+|++ |..||.......+.... ........+..++..+.+++.+||+.+|++||
T Consensus 192 ~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp 266 (277)
T cd05036 192 AFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFV-----TGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRP 266 (277)
T ss_pred HHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-----HcCCcCCCCCCCCHHHHHHHHHHcCCCcccCc
Confidence 9988889999999999999999997 88777654433322111 11112234555678899999999999999999
Q ss_pred CHHHHHHHhc
Q 019495 151 NPKSLVTALS 160 (340)
Q Consensus 151 s~~~i~~~L~ 160 (340)
++.+|++.|.
T Consensus 267 s~~~vl~~l~ 276 (277)
T cd05036 267 NFATILERIQ 276 (277)
T ss_pred CHHHHHHHhh
Confidence 9999998775
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-27 Score=216.27 Aligned_cols=156 Identities=16% Similarity=0.141 Sum_probs=122.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-CccccCCcccCcccccCCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVT 79 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~ 79 (340)
+++.....++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ....||+.|+|||++.+..++
T Consensus 98 l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 176 (333)
T cd05600 98 LSEDHARFYMAEMFEAVDALHELG-YIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVGSPDYMAPEVLRGKGYD 176 (333)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCcccCccccChhHhcCCCCC
Confidence 456778889999999999999999 999999999999999999999999998765432 345789999999999988899
Q ss_pred CCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhh--ccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 80 PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 80 ~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.++|||||||++|||++|..||............. ................+..+.+++.+||..+|++||++.+++.
T Consensus 177 ~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~ 256 (333)
T cd05600 177 FTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKN 256 (333)
T ss_pred CccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHh
Confidence 99999999999999999999987654332211111 0100000000001234678999999999999999999999986
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=208.96 Aligned_cols=159 Identities=18% Similarity=0.248 Sum_probs=125.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~ 76 (340)
+++.+...++.||+.||.|||+.+ ++|+||||+||+++.++.++++|||++....... ...++..|+|||++.+.
T Consensus 103 ~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~ 181 (267)
T cd08229 103 IPEKTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHEN 181 (267)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEECcchhhhccccCCcccccccCCcCccCHHHhcCC
Confidence 467888999999999999999999 9999999999999999999999999877654332 34578899999999888
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++|+||||+++|+|++|..||.......... ...+.........+...+..+.+++.+||+.+|++|||+.+|.
T Consensus 182 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~ 259 (267)
T cd08229 182 GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL--CKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVY 259 (267)
T ss_pred CccchhhHHHHHHHHHHHHhCCCCcccccchHHHH--hhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHH
Confidence 88999999999999999999998875432211110 0111111111112234567899999999999999999999999
Q ss_pred HHhccc
Q 019495 157 TALSPL 162 (340)
Q Consensus 157 ~~L~~~ 162 (340)
+.++++
T Consensus 260 ~~~~~~ 265 (267)
T cd08229 260 DVAKRM 265 (267)
T ss_pred HHHhhh
Confidence 988765
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=206.69 Aligned_cols=155 Identities=21% Similarity=0.308 Sum_probs=123.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-------ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~y~aPE~~ 73 (340)
++|.....++.|++.||.|||+++ ++||||||+||+++.++.+|++|||+++...... ...++..|++||++
T Consensus 94 ~~~~~~~~~~~qi~~~L~~lH~~~-i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~ 172 (257)
T cd05040 94 FLISTLCDYAVQIANGMRYLESKR-FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESL 172 (257)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhCC-ccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHh
Confidence 468889999999999999999999 9999999999999999999999999987654321 22456789999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.+..++.++||||||+++|+|++ |..|+.......+....... ......+...+..+.+++.+||+.+|++||++
T Consensus 173 ~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~ 248 (257)
T cd05040 173 RTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKE----GERLERPEACPQDIYNVMLQCWAHNPADRPTF 248 (257)
T ss_pred cccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhc----CCcCCCCccCCHHHHHHHHHHCCCCcccCCCH
Confidence 88889999999999999999998 88877543322221111111 11112233456889999999999999999999
Q ss_pred HHHHHHhc
Q 019495 153 KSLVTALS 160 (340)
Q Consensus 153 ~~i~~~L~ 160 (340)
.++++.|.
T Consensus 249 ~~~~~~l~ 256 (257)
T cd05040 249 AALREFLP 256 (257)
T ss_pred HHHHHHhc
Confidence 99998774
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=207.36 Aligned_cols=155 Identities=23% Similarity=0.338 Sum_probs=124.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
+++.+++.++.|++.||.|||+.+ ++||||||+||+++.++.++++|||++....... ...++..|+|||++.+
T Consensus 99 ~~~~~~~~i~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~ 177 (260)
T cd05067 99 LTINKLIDMAAQIAEGMAFIERKN-YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY 177 (260)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCC-eecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCHHHhcc
Confidence 467888999999999999999999 9999999999999999999999999987654221 2234568999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+.++.++|+||||+++||+++ |+.||.............. ......+...+.++.+++.+||+.+|++||++++
T Consensus 178 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 252 (260)
T cd05067 178 GTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLER-----GYRMPRPDNCPEELYELMRLCWKEKPEERPTFEY 252 (260)
T ss_pred CCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHc-----CCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 888999999999999999999 8888765433322211111 1112233445678999999999999999999999
Q ss_pred HHHHhcc
Q 019495 155 LVTALSP 161 (340)
Q Consensus 155 i~~~L~~ 161 (340)
++..|+.
T Consensus 253 l~~~l~~ 259 (260)
T cd05067 253 LRSVLED 259 (260)
T ss_pred HHHHhhc
Confidence 9998875
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.2e-28 Score=214.08 Aligned_cols=159 Identities=23% Similarity=0.325 Sum_probs=126.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
++|.+.++++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||.++...... ...++..|+|||++.
T Consensus 137 l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 215 (307)
T cd05098 137 LSFKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF 215 (307)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhc
Confidence 467889999999999999999999 9999999999999999999999999987554321 112346799999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++|+|||||++|+|++ |..|+.......+..... .......+..++..+.+++.+||..+|++||++.
T Consensus 216 ~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 290 (307)
T cd05098 216 DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK-----EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK 290 (307)
T ss_pred cCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH-----cCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHH
Confidence 8889999999999999999998 766765443322221111 1112233455678999999999999999999999
Q ss_pred HHHHHhcccccC
Q 019495 154 SLVTALSPLQKE 165 (340)
Q Consensus 154 ~i~~~L~~~~~~ 165 (340)
+|+..|..+...
T Consensus 291 evl~~l~~~~~~ 302 (307)
T cd05098 291 QLVEDLDRILAL 302 (307)
T ss_pred HHHHHHHHHHHH
Confidence 999999887544
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=210.65 Aligned_cols=158 Identities=18% Similarity=0.245 Sum_probs=126.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++.+++.++.||+.||.|||+++ ++||||||+||+++.++.+|++|||+++...... ...++..|+|||++.
T Consensus 114 l~~~~~~~i~~~i~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~ 192 (280)
T cd05043 114 LSTQQLVHMAIQIACGMSYLHKRG-VIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLV 192 (280)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHh
Confidence 467889999999999999999999 9999999999999999999999999987653321 223466799999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++||||||+++|++++ |+.||.......+....... .....+..++..+.+++.+||..+|++|||+.
T Consensus 193 ~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 267 (280)
T cd05043 193 NKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDG-----YRLAQPINCPDELFAVMACCWALDPEERPSFS 267 (280)
T ss_pred cCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcC-----CCCCCCCcCCHHHHHHHHHHcCCChhhCCCHH
Confidence 8888999999999999999999 88887654333322211111 11122334567899999999999999999999
Q ss_pred HHHHHhccccc
Q 019495 154 SLVTALSPLQK 164 (340)
Q Consensus 154 ~i~~~L~~~~~ 164 (340)
+++..|..+..
T Consensus 268 ~~~~~l~~~~~ 278 (280)
T cd05043 268 QLVQCLTDFHA 278 (280)
T ss_pred HHHHHHHHHHh
Confidence 99999987643
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.3e-28 Score=214.32 Aligned_cols=156 Identities=17% Similarity=0.233 Sum_probs=115.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccC-
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRT- 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~- 75 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+++.|+|||++.+
T Consensus 100 ~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 178 (303)
T cd07869 100 LHPENVKLFLFQLLRGLSYIHQRY-ILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGS 178 (303)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCC
Confidence 356678889999999999999999 999999999999999999999999998654322 23456889999999875
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhH--HHhhhhh-------------c---cccccccCCCCC---------c
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALD--LIRDRNL-------------Q---MLTDSCLEGQFT---------D 128 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~--~~~~~~~-------------~---~~~~~~~~~~~~---------~ 128 (340)
..++.++||||+||++|+|++|..||.+.... .+..... . ...+.......+ .
T Consensus 179 ~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (303)
T cd07869 179 TEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKL 258 (303)
T ss_pred CCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhcc
Confidence 45788999999999999999999998653211 1100000 0 000000000000 0
Q ss_pred hhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 129 DDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 129 ~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
..+..+.+++.+|++.||++|||+.+++.
T Consensus 259 ~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 259 SYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred CCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 12356889999999999999999999985
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=206.44 Aligned_cols=154 Identities=27% Similarity=0.400 Sum_probs=121.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc------cccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS------YSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~------~~~~~~y~aPE~~~ 74 (340)
++|.+...++.|++.||.|||+++ ++||||||+||+++.++.+|++|||++........ ...+..|+|||.+.
T Consensus 91 ~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 169 (252)
T cd05084 91 LKVKELIQMVENAAAGMEYLESKH-CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALN 169 (252)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhc
Confidence 467888999999999999999999 99999999999999999999999999876443211 11235699999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
++.++.++|+||||+++|++++ |..|+............. .......+..++..+.+++.+||+.+|++||++.
T Consensus 170 ~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 244 (252)
T cd05084 170 YGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIE-----QGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFS 244 (252)
T ss_pred CCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHH-----cCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHH
Confidence 8889999999999999999998 666664332222111111 1122234455678899999999999999999999
Q ss_pred HHHHHhc
Q 019495 154 SLVTALS 160 (340)
Q Consensus 154 ~i~~~L~ 160 (340)
++++.|.
T Consensus 245 ~~~~~l~ 251 (252)
T cd05084 245 TVHQELQ 251 (252)
T ss_pred HHHHHHh
Confidence 9998875
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=206.87 Aligned_cols=153 Identities=25% Similarity=0.359 Sum_probs=121.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCcc-----ccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY-----STNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~y~aPE~~~~ 75 (340)
++|..++.++.||+.||.|||+++ ++||||||+||+++.++.+|++|||+++...+.... .++..|+|||.+.+
T Consensus 97 ~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~ 175 (256)
T cd05059 97 LGTEWLLDMCSDVCEAMEYLESNG-FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDY 175 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccccccHhhEEECCCCcEEECCcccceecccccccccCCCCCCccccCHHHhcc
Confidence 467889999999999999999999 999999999999999999999999998765433211 12357999999998
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
..++.++|+||||+++|++++ |..||.............. ......+..++..+.+++.+||+.+|++||++.+
T Consensus 176 ~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~ 250 (256)
T cd05059 176 SRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSA-----GYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKK 250 (256)
T ss_pred CCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHc-----CCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHH
Confidence 889999999999999999999 6766654332222211111 1122334456789999999999999999999999
Q ss_pred HHHHh
Q 019495 155 LVTAL 159 (340)
Q Consensus 155 i~~~L 159 (340)
+++.|
T Consensus 251 ~l~~l 255 (256)
T cd05059 251 LLSQL 255 (256)
T ss_pred HHHHh
Confidence 99876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=220.12 Aligned_cols=159 Identities=21% Similarity=0.313 Sum_probs=125.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++...+.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...++..|+|||++.
T Consensus 234 l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 312 (400)
T cd05105 234 LTTLDLLSFTYQVARGMEFLASKN-CVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIF 312 (400)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhc
Confidence 467888999999999999999999 9999999999999999999999999987543221 223467899999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++|||||||++|||++ |..||+.............. ......+..++..+.+++.+||+.||++||++.
T Consensus 313 ~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 388 (400)
T cd05105 313 DNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKS----GYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFL 388 (400)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhc----CCCCCCCccCCHHHHHHHHHHCccCHhHCcCHH
Confidence 8889999999999999999997 87777653222111111111 112223445668899999999999999999999
Q ss_pred HHHHHhccccc
Q 019495 154 SLVTALSPLQK 164 (340)
Q Consensus 154 ~i~~~L~~~~~ 164 (340)
+|.+.|..+.+
T Consensus 389 ~l~~~l~~l~~ 399 (400)
T cd05105 389 HLSDIVESLLP 399 (400)
T ss_pred HHHHHHHHHcC
Confidence 99999987643
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.95 E-value=9e-28 Score=215.95 Aligned_cols=149 Identities=17% Similarity=0.290 Sum_probs=116.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC----CCccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~ 76 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++.... .....||+.|+|||++.+.
T Consensus 93 l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 171 (327)
T cd05617 93 LPEEHARFYAAEICIALNFLHERG-IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGE 171 (327)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCCcccCCHHHHCCC
Confidence 467888999999999999999999 99999999999999999999999999875321 1235689999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHH---HhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDL---IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.++.++|+|||||++|+|++|+.||....... ........... ....+|...+..+.+++.+||+.||++|+++
T Consensus 172 ~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 172 EYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE--KPIRIPRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred CCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh--CCCCCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 89999999999999999999999884311000 00000011111 1123455566889999999999999999985
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=207.21 Aligned_cols=156 Identities=21% Similarity=0.278 Sum_probs=125.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++..+++++.|++.||.|||+.+ |+||||||+||+++.++.++++|||+++...... ...++..|++||.+.
T Consensus 103 ~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~ 181 (266)
T cd05033 103 FTVGQLVGMLRGIASGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIA 181 (266)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhc
Confidence 478889999999999999999999 9999999999999999999999999988764211 112356799999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++|+||||+++|++++ |..|+............... .....+..++..+.+++.+||+.+|++||++.
T Consensus 182 ~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ 256 (266)
T cd05033 182 YRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDG-----YRLPPPMDCPSALYQLMLDCWQKDRNERPTFS 256 (266)
T ss_pred cCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHH
Confidence 8889999999999999999998 88777554333222211111 11123445668899999999999999999999
Q ss_pred HHHHHhccc
Q 019495 154 SLVTALSPL 162 (340)
Q Consensus 154 ~i~~~L~~~ 162 (340)
+|++.|..+
T Consensus 257 ei~~~l~~~ 265 (266)
T cd05033 257 QIVSTLDKM 265 (266)
T ss_pred HHHHHHHhh
Confidence 999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.9e-28 Score=215.62 Aligned_cols=145 Identities=16% Similarity=0.308 Sum_probs=119.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.+...++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....||+.|+|||++.+.
T Consensus 98 l~~~~~~~i~~qi~~al~~lH~~~-ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 176 (323)
T cd05615 98 FKEPQAVFYAAEISVGLFFLHRRG-IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQ 176 (323)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeccccccccCCCCccccCccCCccccCHHHHcCC
Confidence 467889999999999999999999 999999999999999999999999998754322 234589999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.++.++|+|||||++|+|++|+.||............... ...++...+..+.+++.+||+.+|.+|++.
T Consensus 177 ~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 177 PYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEH------NVSYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred CCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 8999999999999999999999998765433222221111 113445566889999999999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=207.15 Aligned_cols=155 Identities=23% Similarity=0.359 Sum_probs=124.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ ++||||||+||+++.++.+|++|||.+....... ...++..|++||++.++
T Consensus 101 ~~~~~~~~~~~~i~~al~~lH~~~-i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~ 179 (261)
T cd05148 101 LPVASLIDMACQVAEGMAYLEEQN-SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHG 179 (261)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeccccCcceEEEcCCceEEEccccchhhcCCccccccCCCCceEecCHHHHccC
Confidence 467888999999999999999999 9999999999999999999999999987654332 22345679999999888
Q ss_pred CCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i 155 (340)
.++.++|+||||+++|+|++ |..|+............. .......+..++..+.+++.+||+.||.+|||+.++
T Consensus 180 ~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l 254 (261)
T cd05148 180 TFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQIT-----AGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKAL 254 (261)
T ss_pred CCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH-----hCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence 88999999999999999998 777775543222211111 112223445667889999999999999999999999
Q ss_pred HHHhcc
Q 019495 156 VTALSP 161 (340)
Q Consensus 156 ~~~L~~ 161 (340)
++.|+.
T Consensus 255 ~~~L~~ 260 (261)
T cd05148 255 REELDN 260 (261)
T ss_pred HHHHhc
Confidence 999875
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.2e-28 Score=216.11 Aligned_cols=145 Identities=23% Similarity=0.290 Sum_probs=117.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~ 77 (340)
++.....++.||+.||.|||+.+ |+||||||+||+++.+|.+||+|||+++..... ....+++.|+|||++.+..
T Consensus 94 ~~~~~~~~~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 172 (321)
T cd05603 94 LEPRARFYAAEVASAIGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEP 172 (321)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCC
Confidence 45667789999999999999999 999999999999999999999999998753221 2346789999999998888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
++.++|||||||++|||++|..||.......+....... ...++...+..+.+++.+||+.||.+||+..
T Consensus 173 ~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 173 YDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK------PLQLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 999999999999999999999998765433332222111 1234445667899999999999999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-27 Score=205.53 Aligned_cols=153 Identities=19% Similarity=0.306 Sum_probs=120.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc-----cccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-----YSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~y~aPE~~~~ 75 (340)
++|...+.++.|++.||.|||+++ ++||||||+||+++.++.+|++|||.++....... ..++..|+|||++.+
T Consensus 97 ~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 175 (256)
T cd05114 97 LSKDMLLSMCQDVCEGMEYLERNS-FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNF 175 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhccc
Confidence 468889999999999999999999 99999999999999999999999998875433221 123567999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
..++.++|+||||+++|+|++ |+.||............... .....+...+..+.+++.+||+.+|++||++.+
T Consensus 176 ~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~ 250 (256)
T cd05114 176 SKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRG-----FRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAE 250 (256)
T ss_pred CccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-----CCCCCCCCCCHHHHHHHHHHccCCcccCcCHHH
Confidence 888999999999999999999 78777654332222111111 011123334578999999999999999999999
Q ss_pred HHHHh
Q 019495 155 LVTAL 159 (340)
Q Consensus 155 i~~~L 159 (340)
++..|
T Consensus 251 l~~~l 255 (256)
T cd05114 251 LLRAI 255 (256)
T ss_pred HHHhh
Confidence 99876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=210.37 Aligned_cols=159 Identities=14% Similarity=0.241 Sum_probs=120.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++.....++.|++.||.|||+.+ ++||||||+||+++.++.++++|||+++...... ...++..|+|||++.
T Consensus 127 ~~~~~~~~~~~~i~~al~~LH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 205 (296)
T cd05051 127 LSFSTLLYMATQIASGMRYLESLN-FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVL 205 (296)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhh
Confidence 467788999999999999999999 9999999999999999999999999987543321 223467899999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh--CCCCCCcchhHHHhhhhhcccc--ccccCCCCCchhHHHHHHHHHHhhccCCCCCC
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS--GKHIPPSHALDLIRDRNLQMLT--DSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~--g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 150 (340)
++.++.++||||||+++|||++ |..|+........-........ ........+..++.++.+++.+||+.||.+||
T Consensus 206 ~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 285 (296)
T cd05051 206 LGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRP 285 (296)
T ss_pred cCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCC
Confidence 8889999999999999999998 4445543222111111111100 01111122344567899999999999999999
Q ss_pred CHHHHHHHhc
Q 019495 151 NPKSLVTALS 160 (340)
Q Consensus 151 s~~~i~~~L~ 160 (340)
++.+|+..|.
T Consensus 286 t~~el~~~L~ 295 (296)
T cd05051 286 TFREIHLFLQ 295 (296)
T ss_pred CHHHHHHHhc
Confidence 9999998875
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-28 Score=221.22 Aligned_cols=149 Identities=17% Similarity=0.299 Sum_probs=120.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEec-CCCCeEEeccCCCccC----CCCCccccCCcccCcccccCC--C
Q 019495 5 MRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNS----RDGKSYSTNLAFTPPEYLRTG--R 77 (340)
Q Consensus 5 ~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~-~~~~~kl~dfg~~~~~----~~~~~~~~~~~y~aPE~~~~~--~ 77 (340)
+.--+-.||++||.|||++. |||||||.+|||++ -.|.+||+|||.++.. .-..++.||+.|||||++..| .
T Consensus 676 tm~fYtkQILeGLkYLHen~-IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RG 754 (1226)
T KOG4279|consen 676 TMNFYTKQILEGLKYLHENK-IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRG 754 (1226)
T ss_pred HHHHHHHHHHHHhhhhhhcc-eeeccccCCcEEEeeccceEEecccccchhhccCCccccccccchhhhChHhhccCCcC
Confidence 34446899999999999998 99999999999996 5889999999987653 234578999999999999876 4
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
|+.++|||||||++.||.||++||.......-..-. +---...+++|...+.+...+|++|+.+||..||++.+++.
T Consensus 755 YG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFk---VGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 755 YGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFK---VGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred CCchhhhhhccceeEeeccCCCCeeecCChhHhhhh---hcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 899999999999999999999998653221111111 11112355678888999999999999999999999999885
|
|
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=223.54 Aligned_cols=157 Identities=19% Similarity=0.197 Sum_probs=127.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-CccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-------------ccccCCc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------------SYSTNLA 66 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~-~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-------------~~~~~~~ 66 (340)
|++.++++|++|+++|+.+||... +|||||||-+||||+.+|..||||||.+....... ...+|+.
T Consensus 141 lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~ 220 (738)
T KOG1989|consen 141 LTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQ 220 (738)
T ss_pred CChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCcc
Confidence 567899999999999999999875 69999999999999999999999999876432221 1246899
Q ss_pred ccCccccc---CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhc
Q 019495 67 FTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 143 (340)
Q Consensus 67 y~aPE~~~---~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 143 (340)
|++||++. +.+.+.|+|||+|||+||.|+....||.....-. +....+.-+..+..+..+.+||..||+
T Consensus 221 YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la--------Ilng~Y~~P~~p~ys~~l~~LI~~mL~ 292 (738)
T KOG1989|consen 221 YRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA--------ILNGNYSFPPFPNYSDRLKDLIRTMLQ 292 (738)
T ss_pred ccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee--------EEeccccCCCCccHHHHHHHHHHHHhc
Confidence 99999874 4678999999999999999999999997543322 222222223335678999999999999
Q ss_pred cCCCCCCCHHHHHHHhcccccC
Q 019495 144 YEPRERPNPKSLVTALSPLQKE 165 (340)
Q Consensus 144 ~~p~~Rps~~~i~~~L~~~~~~ 165 (340)
.||++||++.+|+..+..+...
T Consensus 293 ~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 293 PNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred cCcccCCCHHHHHHHHHHHhcC
Confidence 9999999999999887766543
|
|
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-27 Score=205.78 Aligned_cols=154 Identities=21% Similarity=0.324 Sum_probs=121.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc-----cccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-----YSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~y~aPE~~~~ 75 (340)
++|.+++.++.||+.||.|||+.+ ++|+||||+||+++.++.+|++|||.++....... ..++..|++||++.+
T Consensus 97 ~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~ 175 (256)
T cd05113 97 FQPSQLLEMCKDVCEGMAYLESKQ-FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLY 175 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhc
Confidence 467889999999999999999999 99999999999999999999999998875543321 223567999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+.++.++|+||||+++|+|++ |..|+................ ....+...+..+.+++.+||+.+|.+||++.+
T Consensus 176 ~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ 250 (256)
T cd05113 176 SKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGL-----RLYRPHLASEKVYAIMYSCWHEKAEERPTFQQ 250 (256)
T ss_pred CcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCC-----CCCCCCCCCHHHHHHHHHHcCCCcccCCCHHH
Confidence 889999999999999999998 887775433322222111111 11223334678999999999999999999999
Q ss_pred HHHHhc
Q 019495 155 LVTALS 160 (340)
Q Consensus 155 i~~~L~ 160 (340)
|+..|+
T Consensus 251 ll~~~~ 256 (256)
T cd05113 251 LLSSIE 256 (256)
T ss_pred HHHhhC
Confidence 997663
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=212.61 Aligned_cols=160 Identities=16% Similarity=0.244 Sum_probs=125.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++...+.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...++..|++||++.
T Consensus 106 ~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~ 184 (303)
T cd05110 106 IGSQLLLNWCVQIAKGMMYLEERR-LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 184 (303)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcC-eeccccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhc
Confidence 467788999999999999999999 9999999999999999999999999987654321 122356899999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++||||||+++||+++ |+.|+............. .......+..++..+.+++.+||..+|++||++.
T Consensus 185 ~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~ 259 (303)
T cd05110 185 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE-----KGERLPQPPICTIDVYMVMVKCWMIDADSRPKFK 259 (303)
T ss_pred cCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-----CCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence 8889999999999999999997 777776543222211111 1111122334567899999999999999999999
Q ss_pred HHHHHhcccccCC
Q 019495 154 SLVTALSPLQKET 166 (340)
Q Consensus 154 ~i~~~L~~~~~~~ 166 (340)
+++..|..+....
T Consensus 260 ~l~~~l~~~~~~~ 272 (303)
T cd05110 260 ELAAEFSRMARDP 272 (303)
T ss_pred HHHHHHHHHHhch
Confidence 9999998875443
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=212.32 Aligned_cols=157 Identities=20% Similarity=0.325 Sum_probs=123.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++.++..++.||+.||.|||+++ ++|+||||+||+++.++.++++|||+++...... ...++..|+|||++.
T Consensus 138 l~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 216 (302)
T cd05055 138 LTLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIF 216 (302)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhc
Confidence 478899999999999999999999 9999999999999999999999999987554322 123457799999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
++.++.++|||||||++|+|++ |..||............. ........+...+..+.+++.+||+.+|++||++.
T Consensus 217 ~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ 292 (302)
T cd05055 217 NCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLI----KEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFK 292 (302)
T ss_pred cCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHH----HcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHH
Confidence 8889999999999999999998 887775432221111111 11111122334467899999999999999999999
Q ss_pred HHHHHhccc
Q 019495 154 SLVTALSPL 162 (340)
Q Consensus 154 ~i~~~L~~~ 162 (340)
+++..|...
T Consensus 293 ell~~l~~~ 301 (302)
T cd05055 293 QIVQLIGKQ 301 (302)
T ss_pred HHHHHHHhh
Confidence 999988753
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.6e-28 Score=214.02 Aligned_cols=151 Identities=21% Similarity=0.237 Sum_probs=133.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~~ 77 (340)
+++..++|+.||+.|+.|||++. |+|||||+.||+++.++.|+|.|||+++...+.. +..||+.||+||.+.+.+
T Consensus 104 ~E~~i~~~~~Q~~~av~ylH~~~-iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~p 182 (426)
T KOG0589|consen 104 PEERILKWFVQILLAVNYLHENR-VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIP 182 (426)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhh-hhcccchhhhhhccccCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCC
Confidence 56788999999999999999888 9999999999999999999999999999887663 568999999999999999
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
|+.++|||||||++|||++-+++|.......+........ ....|...+.++..++..|+..+|..||++.+++.
T Consensus 183 Yn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~-----~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~ 257 (426)
T KOG0589|consen 183 YNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL-----YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLR 257 (426)
T ss_pred CCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc-----CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhh
Confidence 9999999999999999999999998776666665555543 22456667789999999999999999999999986
Q ss_pred H
Q 019495 158 A 158 (340)
Q Consensus 158 ~ 158 (340)
.
T Consensus 258 ~ 258 (426)
T KOG0589|consen 258 R 258 (426)
T ss_pred C
Confidence 4
|
|
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-27 Score=209.41 Aligned_cols=159 Identities=16% Similarity=0.256 Sum_probs=120.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++.+...++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||+++...... ....+..|++||+..
T Consensus 127 ~~~~~~~~~~~~i~~al~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 205 (296)
T cd05095 127 ISYSTLIFMATQIASGMKYLSSLN-FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESIL 205 (296)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCC-eecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHh
Confidence 356789999999999999999999 9999999999999999999999999987653322 122356799999988
Q ss_pred CCCCCCCcceehHHHHHHHHhh--CCCCCCcchhHHHhhhhhccc--cccccCCCCCchhHHHHHHHHHHhhccCCCCCC
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS--GKHIPPSHALDLIRDRNLQML--TDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~--g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 150 (340)
++.++.++|+|||||++|||++ |..|+................ .........+..++..+.+++.+||+.||++||
T Consensus 206 ~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp 285 (296)
T cd05095 206 LGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERP 285 (296)
T ss_pred cCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCC
Confidence 8889999999999999999998 555654332222111110000 000011122344668899999999999999999
Q ss_pred CHHHHHHHhc
Q 019495 151 NPKSLVTALS 160 (340)
Q Consensus 151 s~~~i~~~L~ 160 (340)
++.+|.+.|+
T Consensus 286 ~~~~i~~~l~ 295 (296)
T cd05095 286 SFQEIHATLL 295 (296)
T ss_pred CHHHHHHHHh
Confidence 9999998875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.5e-28 Score=219.76 Aligned_cols=145 Identities=22% Similarity=0.342 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEe-cCCCCeEEeccCCCccCCCCC-ccccCCcccCcccccCCCCCCCc
Q 019495 5 MRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF-DEDGNPRLSTFGLMKNSRDGK-SYSTNLAFTPPEYLRTGRVTPES 82 (340)
Q Consensus 5 ~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill-~~~~~~kl~dfg~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~ 82 (340)
.+..|+.+|+.++.|||++| ||||||||+|||+ +..|+++|+|||.++...... +-+-|..|.|||++....++.++
T Consensus 416 e~~~w~~~lv~Av~~LH~~g-vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~t~~y~APEvl~~~~yt~ac 494 (612)
T KOG0603|consen 416 EASQWAAELVSAVDYLHEQG-VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPALTLQYVAPEVLAIQEYTEAC 494 (612)
T ss_pred HHHHHHHHHHHHHHHHHhcC-eeecCCChhheeecCCCCcEEEEEechhhhCchhhcccchhhcccChhhhccCCCCcch
Confidence 45569999999999999999 9999999999999 699999999999998876652 22457899999999988899999
Q ss_pred ceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 83 VIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 83 Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
|+||||++||+|++|+.||.....+. .....+. .+++...++....+|+.+||+.||.+||++.++..
T Consensus 495 D~WSLGvlLy~ML~G~tp~~~~P~~~---ei~~~i~----~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 495 DWWSLGVLLYEMLTGRTLFAAHPAGI---EIHTRIQ----MPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred hhHHHHHHHHHHHhCCCccccCCchH---HHHHhhc----CCccccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 99999999999999999987654441 1111211 22334566789999999999999999999999974
|
|
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=214.00 Aligned_cols=156 Identities=15% Similarity=0.278 Sum_probs=113.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEe----cCCCCeEEeccCCCccCCCC-------CccccCCcccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF----DEDGNPRLSTFGLMKNSRDG-------KSYSTNLAFTP 69 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill----~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~y~a 69 (340)
+++.....++.||+.||.|||+++ |+||||||+||++ +.++.+||+|||+++..... ....+|+.|+|
T Consensus 105 l~~~~~~~i~~qi~~al~~LH~~~-ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~a 183 (317)
T cd07868 105 LPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA 183 (317)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccC
Confidence 356677889999999999999999 9999999999999 45678999999998764322 23467899999
Q ss_pred cccccCC-CCCCCcceehHHHHHHHHhhCCCCCCcchhH----------HHh-------------hhhhccccc------
Q 019495 70 PEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALD----------LIR-------------DRNLQMLTD------ 119 (340)
Q Consensus 70 PE~~~~~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~----------~~~-------------~~~~~~~~~------ 119 (340)
||++.+. .++.++||||+||++|+|++|++||...... .+. .........
T Consensus 184 PE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (317)
T cd07868 184 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMK 263 (317)
T ss_pred CHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhh
Confidence 9998764 5789999999999999999999887532110 000 000000000
Q ss_pred ----cccC--------CCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 120 ----SCLE--------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 120 ----~~~~--------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.... .......+..+.+++.+||+.||.+|||+++++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~ 313 (317)
T cd07868 264 DFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 313 (317)
T ss_pred hhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000 0000112356889999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-27 Score=206.00 Aligned_cols=152 Identities=26% Similarity=0.385 Sum_probs=118.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC-------CeEEeccCCCccCCCCCccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-------NPRLSTFGLMKNSRDGKSYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~-------~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~ 73 (340)
+++.+++.++.||+.||.|||+++ |+||||||+||+++.++ .+|++|||++..........++..|++||++
T Consensus 98 ~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~y~aPE~~ 176 (259)
T cd05037 98 VSLHWKLDVAKQLASALHYLEDKK-LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVERIPWIAPECI 176 (259)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCC-eecccCccceEEEecCccccCCceeEEeCCCCcccccccccccccCCCccChhhh
Confidence 467889999999999999999999 99999999999999887 7999999998876554455677889999999
Q ss_pred cCC--CCCCCcceehHHHHHHHHhhC-CCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC
Q 019495 74 RTG--RVTPESVIYSFGTLLLDLLSG-KHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150 (340)
Q Consensus 74 ~~~--~~~~~~Di~s~G~il~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 150 (340)
.+. .++.++|+||||+++|+|++| ..|+......... .... . ....+......+.+++.+||..+|.+||
T Consensus 177 ~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~-~~~~---~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp 249 (259)
T cd05037 177 RNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKE-RFYQ---D---QHRLPMPDCAELANLINQCWTYDPTKRP 249 (259)
T ss_pred cCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHH-HHHh---c---CCCCCCCCchHHHHHHHHHhccChhhCC
Confidence 876 689999999999999999996 4444332111111 1111 0 1111222237899999999999999999
Q ss_pred CHHHHHHHhc
Q 019495 151 NPKSLVTALS 160 (340)
Q Consensus 151 s~~~i~~~L~ 160 (340)
++.+|+..|.
T Consensus 250 t~~~il~~l~ 259 (259)
T cd05037 250 SFRAILRDLN 259 (259)
T ss_pred CHHHHHHhcC
Confidence 9999998763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-27 Score=204.84 Aligned_cols=155 Identities=26% Similarity=0.427 Sum_probs=124.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-ccccCCcccCcccccCCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-SYSTNLAFTPPEYLRTGRVT 79 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~ 79 (340)
+++.+++.++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... ....+..|++||.+.++.++
T Consensus 97 ~~~~~~~~~~~qi~~al~~lH~~~-~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~ 175 (254)
T cd05083 97 VSVIQLLQFSLDVAEGMEYLESKK-LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFS 175 (254)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCCceecCHHHhccCCcC
Confidence 367788999999999999999999 9999999999999999999999999987644332 23345679999999888899
Q ss_pred CCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 019495 80 PESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 158 (340)
Q Consensus 80 ~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 158 (340)
.++|+||||+++|+|++ |+.||.............. ......+..++..+.+++.+||+.+|++||++.+++..
T Consensus 176 ~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 250 (254)
T cd05083 176 SKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEK-----GYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREK 250 (254)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhC-----CCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999999998 8877765543322221111 11222344566889999999999999999999999988
Q ss_pred hcc
Q 019495 159 LSP 161 (340)
Q Consensus 159 L~~ 161 (340)
|+.
T Consensus 251 l~~ 253 (254)
T cd05083 251 LEK 253 (254)
T ss_pred Hcc
Confidence 763
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.8e-27 Score=204.27 Aligned_cols=151 Identities=18% Similarity=0.280 Sum_probs=122.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~ 76 (340)
+++.+...++.|++.||.|||+.+ ++|+||||+||+++.++.++++|||+++...... ...++..|+|||++.++
T Consensus 98 ~~~~~~~~i~~~l~~al~~lH~~~-i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 176 (256)
T cd08529 98 LPEDQVWRFFIQILLGLAHLHSKK-ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDK 176 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEeCCCCEEEcccccceeccCccchhhccccCccccCHHHhcCC
Confidence 467788899999999999999999 9999999999999999999999999887654332 23567899999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++|+||||+++++|++|+.||................ ...++...+..+.+++.+||+.+|++||++.+++
T Consensus 177 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll 251 (256)
T cd08529 177 PYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGV-----FPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLL 251 (256)
T ss_pred CCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-----CCCCccccCHHHHHHHHHHccCCcccCcCHHHHh
Confidence 88999999999999999999999886554332222211111 1223335567899999999999999999999987
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 252 ~ 252 (256)
T cd08529 252 R 252 (256)
T ss_pred h
Confidence 5
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=216.02 Aligned_cols=156 Identities=19% Similarity=0.308 Sum_probs=118.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-CccccCCcccCcccccC-CCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRT-GRV 78 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~-~~~ 78 (340)
+++.....++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||++.+ ..+
T Consensus 115 l~~~~~~~i~~qi~~aL~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 193 (343)
T cd07878 115 LSDEHVQFLIYQLLRGLKYIHSAG-IIHRDLKPSNVAVNEDCELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHY 193 (343)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecccCChhhEEECCCCCEEEcCCccceecCCCcCCccccccccCchHhcCCccC
Confidence 467788899999999999999999 999999999999999999999999998865443 34568899999999876 468
Q ss_pred CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhc-----------ccc--------c--cccCC----CCCchhHHH
Q 019495 79 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------MLT--------D--SCLEG----QFTDDDGTE 133 (340)
Q Consensus 79 ~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~-----------~~~--------~--~~~~~----~~~~~~~~~ 133 (340)
+.++|||||||++|+|++|+.||.............. .+. . +.... ......++.
T Consensus 194 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (343)
T cd07878 194 NQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPL 273 (343)
T ss_pred CchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHH
Confidence 8999999999999999999998865322111000000 000 0 00000 001123456
Q ss_pred HHHHHHHhhccCCCCCCCHHHHHH
Q 019495 134 LVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 134 l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+.+++.+|++.||++|||+.+++.
T Consensus 274 ~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 274 AIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred HHHHHHHHcCCChhhCCCHHHHhc
Confidence 889999999999999999999985
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-27 Score=205.68 Aligned_cols=152 Identities=17% Similarity=0.237 Sum_probs=121.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-------CccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-------KSYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~y~aPE~~ 73 (340)
+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||+++..... ....++..|+|||++
T Consensus 101 ~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 179 (263)
T cd06625 101 LTETVTRKYTRQILEGVEYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVI 179 (263)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCccee
Confidence 356678899999999999999999 999999999999999999999999998654322 123467889999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
.+..++.++||||||+++|+|++|+.||........... .........++..++..+.+++.+||..+|++||++.
T Consensus 180 ~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ 255 (263)
T cd06625 180 SGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFK----IATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAE 255 (263)
T ss_pred ccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHH----HhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHH
Confidence 988899999999999999999999988765322211111 1111122334556678899999999999999999999
Q ss_pred HHHH
Q 019495 154 SLVT 157 (340)
Q Consensus 154 ~i~~ 157 (340)
+++.
T Consensus 256 ~ll~ 259 (263)
T cd06625 256 ELLR 259 (263)
T ss_pred HHhh
Confidence 9975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=210.28 Aligned_cols=156 Identities=19% Similarity=0.287 Sum_probs=120.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhC-CCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~-~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.|++.||.|||+. + ++||||||+||+++.++.++|+|||+++..... ....+++.|+|||++.+.
T Consensus 104 l~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 182 (288)
T cd06616 104 IPEEILGKIAVATVKALNYLKEELK-IIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPS 182 (288)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCC-eeccCCCHHHEEEccCCcEEEeecchhHHhccCCccccccCccCccCHHHhccc
Confidence 45677889999999999999986 7 999999999999999999999999998754332 234578899999999865
Q ss_pred ---CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 77 ---RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 77 ---~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
.++.++|+||||+++|+|++|+.||..................+......+..++..+.+++.+||+.+|++||++.
T Consensus 183 ~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~ 262 (288)
T cd06616 183 ARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYK 262 (288)
T ss_pred cccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHH
Confidence 58899999999999999999999886542111100111111111222222334678899999999999999999999
Q ss_pred HHHH
Q 019495 154 SLVT 157 (340)
Q Consensus 154 ~i~~ 157 (340)
+|+.
T Consensus 263 ~i~~ 266 (288)
T cd06616 263 ELLE 266 (288)
T ss_pred HHhc
Confidence 9985
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=219.13 Aligned_cols=155 Identities=18% Similarity=0.304 Sum_probs=119.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
|+|.+++.++.||+.||.|||+++ |+||||||+||+++.++.++|+|||+++...... ...||+.|+|||++.
T Consensus 182 l~~~~~~~i~~ql~~aL~~LH~~g-ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 260 (392)
T PHA03207 182 LPLEQAITIQRRLLEALAYLHGRG-IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLA 260 (392)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhc
Confidence 578899999999999999999999 9999999999999999999999999987544321 346899999999999
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHH----Hhhh----h-----------------hccccccccCCCC--C
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL----IRDR----N-----------------LQMLTDSCLEGQF--T 127 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~----~~~~----~-----------------~~~~~~~~~~~~~--~ 127 (340)
+..++.++|||||||++|||++|+.||.+..... +... . +.... ......+ +
T Consensus 261 ~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 339 (392)
T PHA03207 261 LDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYA-IVLRPPYTIP 339 (392)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhc-ccccCCcccc
Confidence 8889999999999999999999999886532110 0000 0 00000 0000000 1
Q ss_pred -----chhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 128 -----DDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 128 -----~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
...+..+.++|.+||..||++||++.+++.
T Consensus 340 ~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 340 PVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS 374 (392)
T ss_pred chhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence 123467889999999999999999999985
|
|
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=210.13 Aligned_cols=154 Identities=17% Similarity=0.283 Sum_probs=122.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC---ccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~~~ 77 (340)
+++.....++.||+.||.|||+++ ++||||||+||++++++.++|+|||++....... ...+++.|++||++.+..
T Consensus 99 ~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 177 (285)
T cd05605 99 FDEERAVFYAAEITCGLEDLHRER-IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNER 177 (285)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHEEECCCCCEEEeeCCCceecCCCCccccccCCCCccCcHHhcCCC
Confidence 467888999999999999999999 9999999999999999999999999987654332 346789999999998888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC-----CH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP-----NP 152 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s~ 152 (340)
++.++|+||+|+++|++++|+.||.+.............+.. ....++...+..+.+++.+||+.||++|| ++
T Consensus 178 ~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ 255 (285)
T cd05605 178 YTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE--DQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGA 255 (285)
T ss_pred CCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh--cccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCH
Confidence 999999999999999999999998754322111111111111 11233445668899999999999999999 77
Q ss_pred HHHHH
Q 019495 153 KSLVT 157 (340)
Q Consensus 153 ~~i~~ 157 (340)
.+++.
T Consensus 256 ~~l~~ 260 (285)
T cd05605 256 EEVKA 260 (285)
T ss_pred HHHhc
Confidence 78764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-27 Score=208.79 Aligned_cols=161 Identities=19% Similarity=0.343 Sum_probs=122.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-------ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~y~aPE~~ 73 (340)
++|.+++.++.||+.||.|||+++ ++||||||+||+++.++.++|+|||+++...... ...++..|+|||++
T Consensus 106 ~~~~~~~~i~~~i~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~ 184 (284)
T cd05079 106 INLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECL 184 (284)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHh
Confidence 478889999999999999999999 9999999999999999999999999987654321 23456679999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhh----------hhhccccccccCCCCCchhHHHHHHHHHHhhc
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD----------RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 143 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 143 (340)
.+..++.++||||||+++|+|++++.|........... ...............+..++..+.+++.+||+
T Consensus 185 ~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 264 (284)
T cd05079 185 IQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWE 264 (284)
T ss_pred ccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHcc
Confidence 88889999999999999999999876542211100000 00000000011122344567899999999999
Q ss_pred cCCCCCCCHHHHHHHhccc
Q 019495 144 YEPRERPNPKSLVTALSPL 162 (340)
Q Consensus 144 ~~p~~Rps~~~i~~~L~~~ 162 (340)
.+|++||++.+++..|+.+
T Consensus 265 ~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 265 FQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred CCcccCcCHHHHHHHHHhh
Confidence 9999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-27 Score=206.93 Aligned_cols=157 Identities=15% Similarity=0.224 Sum_probs=115.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCcccccC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~ 75 (340)
++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||++....... ...++..|+|||++..
T Consensus 98 ~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 176 (269)
T cd05042 98 QKDVLQRMACEVASGLLWLHQAD-FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEI 176 (269)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcC-EecccccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhh
Confidence 35667889999999999999999 9999999999999999999999999986533221 1234567999998753
Q ss_pred -------CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCC
Q 019495 76 -------GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 147 (340)
Q Consensus 76 -------~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~ 147 (340)
..++.++|||||||++|||++ |..|+......................+..+...+..+..++..|| .||+
T Consensus 177 ~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~ 255 (269)
T cd05042 177 RGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPE 255 (269)
T ss_pred ccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcc
Confidence 346789999999999999999 5666654332222111112111111122334456678889999999 5999
Q ss_pred CCCCHHHHHHHhc
Q 019495 148 ERPNPKSLVTALS 160 (340)
Q Consensus 148 ~Rps~~~i~~~L~ 160 (340)
+||++.+|++.|.
T Consensus 256 ~Rpt~~~v~~~l~ 268 (269)
T cd05042 256 TRPTAEEVHELLT 268 (269)
T ss_pred cccCHHHHHHHhc
Confidence 9999999998763
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-27 Score=193.06 Aligned_cols=152 Identities=17% Similarity=0.146 Sum_probs=115.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCccccCCcccCcccccCCCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTP 80 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 80 (340)
|+|.++..|+.||+.||.|||+++ ||+||+++.++.+|+ ||+++...... ..+++.|||||++.+..++.
T Consensus 14 l~~~~~~~i~~qi~~~L~~lH~~~-------kp~Nil~~~~~~~~~--fG~~~~~~~~~-~~g~~~y~aPE~~~~~~~~~ 83 (176)
T smart00750 14 LNEEEIWAVCLQCLRALRELHRQA-------KSGNILLTWDGLLKL--DGSVAFKTPEQ-SRVDPYFMAPEVIQGQSYTE 83 (176)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcC-------CcccEeEcCccceee--ccceEeecccc-CCCcccccChHHhcCCCCcc
Confidence 578999999999999999999986 999999999999999 99987665443 36789999999999889999
Q ss_pred CcceehHHHHHHHHhhCCCCCCcchhH-HHhhhhhccccccccC-CCCCchhHH--HHHHHHHHhhccCCCCCCCHHHHH
Q 019495 81 ESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLE-GQFTDDDGT--ELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 81 ~~Di~s~G~il~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~--~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
++|||||||++|||+||+.||...... ................ ...+..... .+.+++.+||+.+|++||++.+++
T Consensus 84 ~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll 163 (176)
T smart00750 84 KADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYL 163 (176)
T ss_pred hhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHH
Confidence 999999999999999999987543211 1111111111110000 011222233 699999999999999999999999
Q ss_pred HHhccc
Q 019495 157 TALSPL 162 (340)
Q Consensus 157 ~~L~~~ 162 (340)
..+...
T Consensus 164 ~~~~~~ 169 (176)
T smart00750 164 AHCRAL 169 (176)
T ss_pred HHHHHH
Confidence 876554
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.8e-27 Score=204.89 Aligned_cols=157 Identities=17% Similarity=0.204 Sum_probs=116.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCcccccC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~ 75 (340)
++.....++.|++.||.|||+.+ ++||||||+||+++.++.+|++|||+++...... ...++..|+|||++.+
T Consensus 98 ~~~~~~~~~~qi~~al~~lH~~~-i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 176 (269)
T cd05087 98 DPTTLQRMACEIALGLLHLHKNN-FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDE 176 (269)
T ss_pred cHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhcc
Confidence 45567789999999999999999 9999999999999999999999999986543321 2345678999999864
Q ss_pred C-------CCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCC
Q 019495 76 G-------RVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 147 (340)
Q Consensus 76 ~-------~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~ 147 (340)
. .++.++|+||||+++|||++ |..||......................+......+..+.+++..|| .+|+
T Consensus 177 ~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~ 255 (269)
T cd05087 177 VHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPE 255 (269)
T ss_pred ccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcc
Confidence 2 35789999999999999996 8888765433222111111111111112223334577899999999 6899
Q ss_pred CCCCHHHHHHHhc
Q 019495 148 ERPNPKSLVTALS 160 (340)
Q Consensus 148 ~Rps~~~i~~~L~ 160 (340)
+|||+.+|+..|+
T Consensus 256 ~Rpt~~~l~~~l~ 268 (269)
T cd05087 256 QRPSAEEVHLLLS 268 (269)
T ss_pred cCCCHHHHHHHhc
Confidence 9999999998764
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-27 Score=208.86 Aligned_cols=159 Identities=16% Similarity=0.232 Sum_probs=119.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCcccccC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~ 75 (340)
+|.+.+.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++....... ...++..|+|||++.+
T Consensus 127 ~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 205 (295)
T cd05097 127 SIANLLYMAVQIASGMKYLASLN-FVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILL 205 (295)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcC-eeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhcc
Confidence 57788999999999999999999 9999999999999999999999999987543322 1223568999999988
Q ss_pred CCCCCCcceehHHHHHHHHhhC--CCCCCcchhHHHhhhhhcccc--ccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 76 GRVTPESVIYSFGTLLLDLLSG--KHIPPSHALDLIRDRNLQMLT--DSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
+.++.++|+||||+++|+|+++ ..||................. ........+...+..+.+++.+||+.+|++||+
T Consensus 206 ~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs 285 (295)
T cd05097 206 GKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPT 285 (295)
T ss_pred CCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcC
Confidence 8899999999999999999984 344443222221111110000 001111223445688999999999999999999
Q ss_pred HHHHHHHhcc
Q 019495 152 PKSLVTALSP 161 (340)
Q Consensus 152 ~~~i~~~L~~ 161 (340)
+.+|++.|.+
T Consensus 286 ~~~i~~~l~~ 295 (295)
T cd05097 286 FNKIHHFLRE 295 (295)
T ss_pred HHHHHHHHhC
Confidence 9999988753
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-27 Score=204.04 Aligned_cols=155 Identities=26% Similarity=0.420 Sum_probs=125.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc-cccCCcccCcccccCCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAFTPPEYLRTGRVT 79 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~y~aPE~~~~~~~~ 79 (340)
++|..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||.++....... ...+..|++||++.++.++
T Consensus 99 ~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~~~~~~~ 177 (256)
T cd05039 99 ITLAQQLGFALDVCEGMEYLEEKN-FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFS 177 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-ccchhcccceEEEeCCCCEEEcccccccccccccccCCCcccccCchhhcCCcCC
Confidence 467889999999999999999999 99999999999999999999999999887643332 2335679999999888889
Q ss_pred CCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 019495 80 PESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 158 (340)
Q Consensus 80 ~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 158 (340)
.++|+||||++++++++ |..||.......+...... ......+..++..+.+++.+||+.+|++||++.+++..
T Consensus 178 ~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 252 (256)
T cd05039 178 TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEK-----GYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQ 252 (256)
T ss_pred cHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc-----CCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 99999999999999997 8877765433322221111 11223344566889999999999999999999999998
Q ss_pred hcc
Q 019495 159 LSP 161 (340)
Q Consensus 159 L~~ 161 (340)
|+.
T Consensus 253 l~~ 255 (256)
T cd05039 253 LAL 255 (256)
T ss_pred Hhc
Confidence 865
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-27 Score=230.59 Aligned_cols=159 Identities=25% Similarity=0.364 Sum_probs=127.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCccc----c--CCcccCcccccC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS----T--NLAFTPPEYLRT 75 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~----~--~~~y~aPE~~~~ 75 (340)
+...-+.++.||++|+.||++++ +|||||..+|+||+....|||+|||+++.+.+...+. + ...|||||.+..
T Consensus 800 ~~~dLl~~a~dvA~G~~YLe~~~-fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d 878 (1025)
T KOG1095|consen 800 SMRDLLAFALDVAKGMNYLESKH-FVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKD 878 (1025)
T ss_pred CHHHHHHHHHHHhhhhHHHHhCC-CcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhh
Confidence 44567899999999999999999 9999999999999999999999999999544332211 1 357999999999
Q ss_pred CCCCCCcceehHHHHHHHHhhCC-CCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGK-HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+.+|.++|||||||++||++|.. .|++......+... +.... +.+.|..|+..+.++|..||+.+|++||+|..
T Consensus 879 ~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~----~~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~ 953 (1025)
T KOG1095|consen 879 GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLD----VLEGG-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRT 953 (1025)
T ss_pred cccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHH----HHhCC-ccCCCCCCChHHHHHHHHHccCChhhCccHHH
Confidence 99999999999999999999955 55554433222111 11111 44567788999999999999999999999999
Q ss_pred HHHHhcccccCC
Q 019495 155 LVTALSPLQKET 166 (340)
Q Consensus 155 i~~~L~~~~~~~ 166 (340)
|++.+..+....
T Consensus 954 i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 954 IVEQDPAISNAA 965 (1025)
T ss_pred HHhhhhhhhhhh
Confidence 999887776544
|
|
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.5e-27 Score=202.81 Aligned_cols=154 Identities=28% Similarity=0.419 Sum_probs=121.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc------cccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS------YSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~------~~~~~~y~aPE~~~ 74 (340)
+++...+.++.+++.||.|||+++ ++||||||+||+++.++.++|+|||++........ ...+..|+|||.+.
T Consensus 90 ~~~~~~~~~~~~~~~~l~~lH~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~ 168 (251)
T cd05041 90 LTVKKLLQMSLDAAAGMEYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALN 168 (251)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhc
Confidence 356778899999999999999999 99999999999999999999999999876542211 12245699999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
++.++.++|+||||+++|+|++ |..|+.............. ......+...+..+.+++.+||+.+|++||++.
T Consensus 169 ~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ 243 (251)
T cd05041 169 YGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIES-----GYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFS 243 (251)
T ss_pred cCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhc-----CCCCCCCccCCHHHHHHHHHHhccChhhCcCHH
Confidence 8889999999999999999999 6666655433222211111 112223445678999999999999999999999
Q ss_pred HHHHHhc
Q 019495 154 SLVTALS 160 (340)
Q Consensus 154 ~i~~~L~ 160 (340)
++++.|.
T Consensus 244 ell~~l~ 250 (251)
T cd05041 244 EIYNELQ 250 (251)
T ss_pred HHHHHhh
Confidence 9998875
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-27 Score=213.05 Aligned_cols=156 Identities=18% Similarity=0.317 Sum_probs=113.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEe----cCCCCeEEeccCCCccCCCC-------CccccCCcccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF----DEDGNPRLSTFGLMKNSRDG-------KSYSTNLAFTP 69 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill----~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~y~a 69 (340)
+++.....++.||+.||.|||+.+ |+||||||+||++ +.++.+||+|||+++..... ....+|+.|+|
T Consensus 105 l~~~~~~~i~~qi~~aL~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~a 183 (317)
T cd07867 105 LPRSMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA 183 (317)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccC
Confidence 356778899999999999999999 9999999999999 56678999999998765432 22356889999
Q ss_pred cccccCC-CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHh---------hh--------------hhcc------ccc
Q 019495 70 PEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR---------DR--------------NLQM------LTD 119 (340)
Q Consensus 70 PE~~~~~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~---------~~--------------~~~~------~~~ 119 (340)
||++.+. .++.++|||||||++|||+||.+||......... .. .... ...
T Consensus 184 PE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (317)
T cd07867 184 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQK 263 (317)
T ss_pred cHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhh
Confidence 9998764 5789999999999999999999887532110000 00 0000 000
Q ss_pred c---------cc---CCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 120 S---------CL---EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 120 ~---------~~---~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
. .. ........+..+.+++.+|++.||.+|||+.+++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~ 313 (317)
T cd07867 264 DFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQ 313 (317)
T ss_pred hhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhc
Confidence 0 00 00011122356888999999999999999999984
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.8e-27 Score=202.53 Aligned_cols=154 Identities=26% Similarity=0.422 Sum_probs=123.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
+++.+++.++.|++.+|.|+|+.+ ++||||||+||+++.++.++|+|||++....... ...++..|+|||++.+
T Consensus 90 ~~~~~~~~~~~~i~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 168 (250)
T cd05085 90 LKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNY 168 (250)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcccccCHHHhcc
Confidence 467888999999999999999999 9999999999999999999999999987544332 1123567999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+.++.++|+||||+++|++++ |..||.............. ......+..++..+.+++.+||+.+|++||++.+
T Consensus 169 ~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 243 (250)
T cd05085 169 GRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEK-----GYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSE 243 (250)
T ss_pred CCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHH
Confidence 889999999999999999998 8877765433322211111 1122334456789999999999999999999999
Q ss_pred HHHHhc
Q 019495 155 LVTALS 160 (340)
Q Consensus 155 i~~~L~ 160 (340)
+...|.
T Consensus 244 l~~~l~ 249 (250)
T cd05085 244 LQKELA 249 (250)
T ss_pred HHHHhc
Confidence 998764
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-27 Score=206.06 Aligned_cols=156 Identities=21% Similarity=0.302 Sum_probs=122.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++.+...++.||+.||.|||+++ |+||||||+||+++.++.+|++|||+++...... ...++..|++||.+.
T Consensus 110 l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 188 (273)
T cd05074 110 LPLQTLVRFMIDIASGMEYLSSKN-FIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLA 188 (273)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHh
Confidence 466788999999999999999999 9999999999999999999999999987654322 223356799999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++||||||+++|+|++ |..|+.......+....... .....+...+..+.+++.+||+.+|+.|||+.
T Consensus 189 ~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~ 263 (273)
T cd05074 189 DNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKG-----NRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQ 263 (273)
T ss_pred cCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcC-----CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence 8888999999999999999999 77776544332221111110 01122334567899999999999999999999
Q ss_pred HHHHHhccc
Q 019495 154 SLVTALSPL 162 (340)
Q Consensus 154 ~i~~~L~~~ 162 (340)
+++..|+.+
T Consensus 264 ~~~~~l~~~ 272 (273)
T cd05074 264 HLRDQLELI 272 (273)
T ss_pred HHHHHHHhh
Confidence 999998765
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-27 Score=217.63 Aligned_cols=156 Identities=18% Similarity=0.263 Sum_probs=118.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
|++.....++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++...... ...+++.|+|||++.+
T Consensus 100 l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 178 (372)
T cd07853 100 LSSDHVKVFLYQILRGLKYLHSAG-ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMG 178 (372)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcC
Confidence 467788899999999999999999 9999999999999999999999999987543221 2346789999999986
Q ss_pred C-CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhc-------------------ccc-----ccccC--CCCCc
Q 019495 76 G-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-------------------MLT-----DSCLE--GQFTD 128 (340)
Q Consensus 76 ~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~-------------------~~~-----~~~~~--~~~~~ 128 (340)
. .++.++|||||||++|||++|+.||.............. .+. .+... .....
T Consensus 179 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (372)
T cd07853 179 SRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSS 258 (372)
T ss_pred CCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCC
Confidence 4 478899999999999999999998865422111100000 000 00000 01223
Q ss_pred hhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 129 DDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 129 ~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
..+..+.+++.+||+.||++|||+.+++.
T Consensus 259 ~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 259 QATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred CCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 34578899999999999999999999985
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.5e-27 Score=207.91 Aligned_cols=161 Identities=21% Similarity=0.349 Sum_probs=122.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCcc-------ccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY-------STNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-------~~~~~y~aPE~~ 73 (340)
++|..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++........ .++..|+|||++
T Consensus 105 l~~~~~~~~~~~l~~aL~~LH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 183 (284)
T cd05081 105 LDHRKLLLYASQICKGMEYLGSKR-YVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESL 183 (284)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHh
Confidence 468889999999999999999999 999999999999999999999999998865433211 123459999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHh---hhh--------hccccccccCCCCCchhHHHHHHHHHHhh
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR---DRN--------LQMLTDSCLEGQFTDDDGTELVRLASRCL 142 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~---~~~--------~~~~~~~~~~~~~~~~~~~~l~~li~~cl 142 (340)
.+..++.++|+||||++++||++|..++......... ... .............+..++..+.+++.+||
T Consensus 184 ~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 263 (284)
T cd05081 184 TESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECW 263 (284)
T ss_pred ccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHc
Confidence 8888999999999999999999987654322111110 000 00001111111233456688999999999
Q ss_pred ccCCCCCCCHHHHHHHhccc
Q 019495 143 QYEPRERPNPKSLVTALSPL 162 (340)
Q Consensus 143 ~~~p~~Rps~~~i~~~L~~~ 162 (340)
+.+|++|||+.+|+..|+.+
T Consensus 264 ~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 264 NNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred cCChhhCCCHHHHHHHHHhc
Confidence 99999999999999988765
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.2e-27 Score=205.82 Aligned_cols=152 Identities=24% Similarity=0.363 Sum_probs=117.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC-------CeEEeccCCCccCCCCCccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-------NPRLSTFGLMKNSRDGKSYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~-------~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~ 73 (340)
+++.+++.++.||+.||.|||+++ |+||||||+||+++..+ .+|++|||++..........++..|+|||++
T Consensus 114 ~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~ 192 (274)
T cd05076 114 VPVAWKITVAQQLASALSYLEDKN-LVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECV 192 (274)
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCC-ccCCCCCcccEEEeccCcccCccceeeecCCccccccccccccccCCcccCchhh
Confidence 468889999999999999999999 99999999999997644 3799999987655444445678889999988
Q ss_pred cC-CCCCCCcceehHHHHHHHHh-hCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 74 RT-GRVTPESVIYSFGTLLLDLL-SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 74 ~~-~~~~~~~Di~s~G~il~el~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
.+ ..++.++|+||||+++||++ +|..|+.......... .... ....+...+..+.+++.+||+.+|++||+
T Consensus 193 ~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~li~~cl~~~p~~Rps 265 (274)
T cd05076 193 PGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKER-FYEK------KHRLPEPSCKELATLISQCLTYEPTQRPS 265 (274)
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHH-HHHh------ccCCCCCCChHHHHHHHHHcccChhhCcC
Confidence 75 45789999999999999995 6777765433222111 1010 11122333467999999999999999999
Q ss_pred HHHHHHHhc
Q 019495 152 PKSLVTALS 160 (340)
Q Consensus 152 ~~~i~~~L~ 160 (340)
+.+|+..|.
T Consensus 266 ~~~il~~L~ 274 (274)
T cd05076 266 FRTILRDLT 274 (274)
T ss_pred HHHHHHhhC
Confidence 999998763
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-27 Score=212.25 Aligned_cols=157 Identities=22% Similarity=0.326 Sum_probs=117.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--CccccCCcccCcccccCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTGRV 78 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~~ 78 (340)
+++.....++.|++.||.|||+++.++||||||+||+++.++.+||+|||++...... ....++..|+|||++.+..+
T Consensus 100 ~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 179 (333)
T cd06650 100 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY 179 (333)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCCCCccccCHHHhcCCCC
Confidence 3566778999999999999998633999999999999999999999999998754332 23468899999999998889
Q ss_pred CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhh---c---------------------------------cccc---
Q 019495 79 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL---Q---------------------------------MLTD--- 119 (340)
Q Consensus 79 ~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~---~---------------------------------~~~~--- 119 (340)
+.++|+|||||++|+|++|+.||.......+..... . .+..
T Consensus 180 ~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (333)
T cd06650 180 SVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIV 259 (333)
T ss_pred CcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHh
Confidence 999999999999999999999886432211110000 0 0000
Q ss_pred cccCCCCC-chhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 120 SCLEGQFT-DDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 120 ~~~~~~~~-~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.......+ ...+.++.+++.+||+.||++||++.+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 260 NEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred cCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence 00000111 123567899999999999999999999974
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-27 Score=206.86 Aligned_cols=152 Identities=13% Similarity=0.159 Sum_probs=118.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccC-
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRT- 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~- 75 (340)
++|.+...++.|++.||.|||+++ |+||||||+||+++.++.++|+|||++...... ....++..|+|||++.+
T Consensus 108 l~~~~~~~~~~qi~~~l~~LH~~~-ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~ 186 (272)
T cd06637 108 LKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACD 186 (272)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHEEECCCCCEEEccCCCceecccccccCCcccccccccCHhHhccc
Confidence 467788899999999999999999 999999999999999999999999998754322 23467889999999863
Q ss_pred ----CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 76 ----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 76 ----~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
..++.++|+|||||++|||++|+.||............ . ........+..++..+.+++.+||+.+|.+||+
T Consensus 187 ~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt 262 (272)
T cd06637 187 ENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI-P---RNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPT 262 (272)
T ss_pred cCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH-h---cCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCC
Confidence 35788999999999999999999887543221111111 1 111111123345678999999999999999999
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.+++.
T Consensus 263 ~~~il~ 268 (272)
T cd06637 263 TEQLMK 268 (272)
T ss_pred HHHHhh
Confidence 999874
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-27 Score=215.92 Aligned_cols=150 Identities=20% Similarity=0.222 Sum_probs=116.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC----CCccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.++|+|||+++.... .....||+.|+|||++.+.
T Consensus 93 ~~~~~~~~~~~qil~al~~LH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 171 (330)
T cd05586 93 FSEDRAKFYIAELVLALEHLHKYD-IVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDE 171 (330)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCC
Confidence 456778889999999999999999 99999999999999999999999999865322 1245689999999998764
Q ss_pred -CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCC-chhHHHHHHHHHHhhccCCCCCCC---
Q 019495 77 -RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT-DDDGTELVRLASRCLQYEPRERPN--- 151 (340)
Q Consensus 77 -~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~~p~~Rps--- 151 (340)
.++.++|||||||++|+|++|..||.......+....... . ..++ ...+..+.+++.+||+.||++||+
T Consensus 172 ~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~--~----~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~ 245 (330)
T cd05586 172 KGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFG--K----VRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHR 245 (330)
T ss_pred CCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcC--C----CCCCCccCCHHHHHHHHHHcCCCHHHCCCCCC
Confidence 4789999999999999999999998765433222211111 0 0111 124578899999999999999984
Q ss_pred -HHHHHH
Q 019495 152 -PKSLVT 157 (340)
Q Consensus 152 -~~~i~~ 157 (340)
+.++++
T Consensus 246 ~~~~ll~ 252 (330)
T cd05586 246 DAVELKE 252 (330)
T ss_pred CHHHHhc
Confidence 555553
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.5e-27 Score=203.02 Aligned_cols=151 Identities=17% Similarity=0.266 Sum_probs=122.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.+...++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....+++.|+|||++.+.
T Consensus 99 l~~~~~~~~~~~l~~~l~~lH~~~-i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 177 (257)
T cd08223 99 LPENQVVEWFVQIAMALQYLHEKH-ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNK 177 (257)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCchhEEEecCCcEEEecccceEEecccCCccccccCCcCccChhHhcCC
Confidence 467888999999999999999999 999999999999999999999999998755332 234568899999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++|+||||+++++|++|+.||............... .....+...+..+.+++.+||+.+|++||++.+++
T Consensus 178 ~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l 252 (257)
T cd08223 178 PYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEG-----KLPPMPKDYSPELGELIATMLSKRPEKRPSVKSIL 252 (257)
T ss_pred CCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc-----CCCCCccccCHHHHHHHHHHhccCcccCCCHHHHh
Confidence 8899999999999999999999888654332221111111 11123445668899999999999999999999987
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 253 ~ 253 (257)
T cd08223 253 R 253 (257)
T ss_pred c
Confidence 4
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.8e-27 Score=203.61 Aligned_cols=154 Identities=22% Similarity=0.351 Sum_probs=122.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC-----CeEEeccCCCccCCCCC------ccccCCcccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-----NPRLSTFGLMKNSRDGK------SYSTNLAFTP 69 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~-----~~kl~dfg~~~~~~~~~------~~~~~~~y~a 69 (340)
++|.+++.++.||+.||.|||+++ ++|+||||+||+++.++ .++++|||+++...... ...++..|++
T Consensus 103 ~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~a 181 (269)
T cd05044 103 LTLKELLDICLDVAKGCVYLEQMH-FIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMA 181 (269)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCC-cccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccC
Confidence 367888999999999999999999 99999999999999877 89999999987543321 1234578999
Q ss_pred cccccCCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCC
Q 019495 70 PEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 148 (340)
Q Consensus 70 PE~~~~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~ 148 (340)
||++.++.++.++||||||+++|+|++ |..||............ ........+...+..+.+++.+||+.+|.+
T Consensus 182 PE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 256 (269)
T cd05044 182 PESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHV-----TAGGRLQKPENCPDKIYQLMTNCWAQDPSE 256 (269)
T ss_pred HHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHH-----hcCCccCCcccchHHHHHHHHHHcCCCccc
Confidence 999998889999999999999999998 88887654322211111 111112234456788999999999999999
Q ss_pred CCCHHHHHHHhc
Q 019495 149 RPNPKSLVTALS 160 (340)
Q Consensus 149 Rps~~~i~~~L~ 160 (340)
||++.+|++.|.
T Consensus 257 Rp~~~~i~~~l~ 268 (269)
T cd05044 257 RPTFDRIQEILQ 268 (269)
T ss_pred CCCHHHHHHHHh
Confidence 999999998875
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.9e-27 Score=205.15 Aligned_cols=156 Identities=21% Similarity=0.288 Sum_probs=123.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc--c-----ccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--Y-----STNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~--~-----~~~~~y~aPE~~ 73 (340)
++|.+...++.|++.||.|||+.+ ++||||||+||+++.++.+|++|||++........ . ..+..|++||++
T Consensus 104 ~~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~ 182 (268)
T cd05063 104 FSSYQLVGMLRGIAAGMKYLSDMN-YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAI 182 (268)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHh
Confidence 467889999999999999999999 99999999999999999999999999875533211 1 123569999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.++.++.++|+||||+++||+++ |..|+.............. ......+..++..+.+++.+||+.+|++||++
T Consensus 183 ~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~ 257 (268)
T cd05063 183 AYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAIND-----GFRLPAPMDCPSAVYQLMLQCWQQDRARRPRF 257 (268)
T ss_pred hcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhc-----CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCH
Confidence 88888999999999999999998 8888765433222211111 11222334456889999999999999999999
Q ss_pred HHHHHHhccc
Q 019495 153 KSLVTALSPL 162 (340)
Q Consensus 153 ~~i~~~L~~~ 162 (340)
.+|++.|.++
T Consensus 258 ~~i~~~l~~~ 267 (268)
T cd05063 258 VDIVNLLDKL 267 (268)
T ss_pred HHHHHHHHhh
Confidence 9999988764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.8e-27 Score=212.63 Aligned_cols=159 Identities=25% Similarity=0.353 Sum_probs=123.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
++|...+.++.||+.||.|||+++ |+||||||.||+++.++.+|++|||++....... ...++..|++||++.
T Consensus 176 ~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 254 (343)
T cd05103 176 LTLEDLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 254 (343)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhc
Confidence 467888999999999999999999 9999999999999999999999999987643221 123456799999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++|+||||+++|+|++ |..|+.............. .......+...++.+.+++.+||+.+|++||++.
T Consensus 255 ~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~ 330 (343)
T cd05103 255 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK----EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 330 (343)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHh----ccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHH
Confidence 8889999999999999999997 7777654321111111111 1111122333457899999999999999999999
Q ss_pred HHHHHhccccc
Q 019495 154 SLVTALSPLQK 164 (340)
Q Consensus 154 ~i~~~L~~~~~ 164 (340)
+|++.|+.+..
T Consensus 331 eil~~l~~~~~ 341 (343)
T cd05103 331 ELVEHLGNLLQ 341 (343)
T ss_pred HHHHHHHHHHh
Confidence 99999987654
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-27 Score=207.53 Aligned_cols=154 Identities=19% Similarity=0.309 Sum_probs=121.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.....++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++...... ....++..|+|||++.+..
T Consensus 99 ~~~~~~~~~~~ql~~~l~~lH~~~-iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~ 177 (285)
T cd05632 99 FEEERALFYAAEILCGLEDLHREN-TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQR 177 (285)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCCCCCcCccChHHhcCCC
Confidence 467889999999999999999999 999999999999999999999999988654332 2346789999999998888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC-----H
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN-----P 152 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps-----~ 152 (340)
++.++|+||||+++|+|++|..||...............+... ...++...+..+.+++.+||+.||++||+ +
T Consensus 178 ~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ 255 (285)
T cd05632 178 YTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLET--EEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGA 255 (285)
T ss_pred CCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcc--ccccCccCCHHHHHHHHHHccCCHhHcCCCcccCh
Confidence 9999999999999999999999986543222111111111111 12234455678999999999999999999 5
Q ss_pred HHHHH
Q 019495 153 KSLVT 157 (340)
Q Consensus 153 ~~i~~ 157 (340)
.+++.
T Consensus 256 ~~l~~ 260 (285)
T cd05632 256 GEVKR 260 (285)
T ss_pred HHHHc
Confidence 56654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.8e-27 Score=204.90 Aligned_cols=158 Identities=20% Similarity=0.285 Sum_probs=124.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.++..++.|++.||.|||+.+ ++||||+|+||+++.++.++++|||++...... ....++..|+|||.+.+.
T Consensus 103 ~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~ 181 (267)
T cd08224 103 IPERTIWKYFVQLCSALEHMHSKR-IMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHEN 181 (267)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCC-EecCCcChhhEEECCCCcEEEeccceeeeccCCCcccceecCCccccCHHHhccC
Confidence 367788999999999999999999 999999999999999999999999987754332 224577889999999888
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCc-hhHHHHHHHHHHhhccCCCCCCCHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD-DDGTELVRLASRCLQYEPRERPNPKSL 155 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~li~~cl~~~p~~Rps~~~i 155 (340)
.++.++|+||||+++|+|++|+.|+.......... ...+. .......+. ..+..+.+++.+||..+|++||++.+|
T Consensus 182 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~i 258 (267)
T cd08224 182 GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL--CKKIE-KCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYV 258 (267)
T ss_pred CCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHH--Hhhhh-cCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHH
Confidence 89999999999999999999998875432111000 00000 011112222 455789999999999999999999999
Q ss_pred HHHhccc
Q 019495 156 VTALSPL 162 (340)
Q Consensus 156 ~~~L~~~ 162 (340)
+..|+.+
T Consensus 259 l~~~~~~ 265 (267)
T cd08224 259 LQVAKEM 265 (267)
T ss_pred HHHHHHh
Confidence 9998876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-27 Score=208.01 Aligned_cols=161 Identities=24% Similarity=0.343 Sum_probs=124.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc-------cccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-------YSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~-------~~~~~~y~aPE~~ 73 (340)
++|..++.++.|++.||.|||+++ ++||||||+||+++.++.++++|||.+........ ..++..|++||.+
T Consensus 106 ~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~ 184 (284)
T cd05038 106 INLKRLLLFSSQICKGMDYLGSQR-YIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECL 184 (284)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHH
Confidence 467888999999999999999999 99999999999999999999999999887653321 1234569999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHh----------hhhhccccccccCCCCCchhHHHHHHHHHHhhc
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR----------DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 143 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 143 (340)
.+..++.++|+||||++++||++|..|+......... ................+..++..+.+++.+||+
T Consensus 185 ~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 264 (284)
T cd05038 185 RTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWE 264 (284)
T ss_pred ccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhc
Confidence 8888899999999999999999999876543221110 001111111111122234456789999999999
Q ss_pred cCCCCCCCHHHHHHHhccc
Q 019495 144 YEPRERPNPKSLVTALSPL 162 (340)
Q Consensus 144 ~~p~~Rps~~~i~~~L~~~ 162 (340)
.+|++||++.+|++.|+.+
T Consensus 265 ~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 265 AEPQDRPSFADLILIVDRL 283 (284)
T ss_pred cChhhCCCHHHHHHHHhhc
Confidence 9999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=202.15 Aligned_cols=156 Identities=21% Similarity=0.324 Sum_probs=123.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc-----cccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-----YSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~y~aPE~~~~ 75 (340)
+++.+++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||.+........ ..++..|++||++.+
T Consensus 99 ~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~ 177 (260)
T cd05073 99 QPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINF 177 (260)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhcc
Confidence 367788999999999999999999 99999999999999999999999998875443221 123567999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+.++.++|+||||+++|++++ |..||............... .....+...+.++.+++.+||+.+|++||++.+
T Consensus 178 ~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ 252 (260)
T cd05073 178 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-----YRMPRPENCPEELYNIMMRCWKNRPEERPTFEY 252 (260)
T ss_pred CCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC-----CCCCCcccCCHHHHHHHHHHcccCcccCcCHHH
Confidence 888999999999999999999 78777654332222111111 111233445678999999999999999999999
Q ss_pred HHHHhccc
Q 019495 155 LVTALSPL 162 (340)
Q Consensus 155 i~~~L~~~ 162 (340)
+...|+.+
T Consensus 253 l~~~L~~~ 260 (260)
T cd05073 253 IQSVLDDF 260 (260)
T ss_pred HHHHHhcC
Confidence 99988753
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.5e-27 Score=205.60 Aligned_cols=153 Identities=17% Similarity=0.183 Sum_probs=119.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCccccc--
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLR-- 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~-- 74 (340)
+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++++|||++...... ....++..|+|||++.
T Consensus 100 l~~~~~~~~~~qi~~~L~~LH~~~-i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 178 (282)
T cd06643 100 LTEPQIRVVCKQTLEALNYLHENK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCE 178 (282)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEccCCCEEEccccccccccccccccccccccccccCHhhcccc
Confidence 467889999999999999999999 999999999999999999999999988654322 2345788999999984
Q ss_pred ---CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 75 ---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 75 ---~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
+..++.++|+|||||++|+|++|+.||................ . .....+..++..+.+++.+||+.+|.+||+
T Consensus 179 ~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~ 255 (282)
T cd06643 179 TSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE-P--PTLAQPSRWSSEFKDFLKKCLEKNVDARWT 255 (282)
T ss_pred CCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcC-C--CCCCCccccCHHHHHHHHHHccCChhhCcC
Confidence 3457789999999999999999998876543222111111110 1 111223445678999999999999999999
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.+++.
T Consensus 256 ~~~il~ 261 (282)
T cd06643 256 TTQLLQ 261 (282)
T ss_pred HHHHhc
Confidence 999874
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.5e-27 Score=212.84 Aligned_cols=156 Identities=12% Similarity=0.215 Sum_probs=115.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
++|..+..|+.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ....||+.|+|||++.+..
T Consensus 154 ~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 232 (357)
T PHA03209 154 LPIDQALIIEKQILEGLRYLHAQR-IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDK 232 (357)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEecCccccccccCcccccccccccccCCeecCCCC
Confidence 468889999999999999999999 999999999999999999999999998753322 2346889999999999888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHH----Hh--hhhh----c--cccccccC-------------------CCC
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDL----IR--DRNL----Q--MLTDSCLE-------------------GQF 126 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~----~~--~~~~----~--~~~~~~~~-------------------~~~ 126 (340)
++.++|||||||++|||+++..++....... .. ...+ . ...+..+. ...
T Consensus 233 ~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (357)
T PHA03209 233 YNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPY 312 (357)
T ss_pred CCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcc
Confidence 9999999999999999998765542210000 00 0000 0 00000000 000
Q ss_pred -------CchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 127 -------TDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 127 -------~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
....+..+.++|.+||+.||.+|||+.+++.
T Consensus 313 ~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~ 350 (357)
T PHA03209 313 TRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILN 350 (357)
T ss_pred cccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhc
Confidence 0123456677999999999999999999985
|
|
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-26 Score=202.61 Aligned_cols=156 Identities=13% Similarity=0.182 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC------CCccccCCcccCcccccC-
Q 019495 3 WAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------GKSYSTNLAFTPPEYLRT- 75 (340)
Q Consensus 3 ~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~- 75 (340)
+.....++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++..... .....++..|+|||++..
T Consensus 98 ~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 176 (268)
T cd05086 98 LLLLQRMACEIAAGVTHMHKHN-FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEF 176 (268)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC-eeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccc
Confidence 3456788999999999999999 99999999999999999999999998754221 123456789999999853
Q ss_pred ------CCCCCCcceehHHHHHHHHhhCC-CCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCC
Q 019495 76 ------GRVTPESVIYSFGTLLLDLLSGK-HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 148 (340)
Q Consensus 76 ------~~~~~~~Di~s~G~il~el~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~ 148 (340)
..++.++||||||+++|||+++. .|+......................+..+...+..+.+++..|| .+|++
T Consensus 177 ~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~ 255 (268)
T cd05086 177 HGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEK 255 (268)
T ss_pred cCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCccc
Confidence 23577999999999999999864 45533222211111111111111222333445678899999999 67999
Q ss_pred CCCHHHHHHHhc
Q 019495 149 RPNPKSLVTALS 160 (340)
Q Consensus 149 Rps~~~i~~~L~ 160 (340)
||++.+|+..|.
T Consensus 256 Rp~~~~i~~~l~ 267 (268)
T cd05086 256 RATAEEVHRLLT 267 (268)
T ss_pred CCCHHHHHHHhc
Confidence 999999988764
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.2e-27 Score=214.62 Aligned_cols=154 Identities=15% Similarity=0.137 Sum_probs=115.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----------------------
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---------------------- 58 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---------------------- 58 (340)
+++.....++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 98 l~~~~~~~~~~qi~~aL~~lH~~g-ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (363)
T cd05628 98 LTEEETQFYIAETVLAIDSIHQLG-FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNM 176 (363)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCCEEEeeccCccccccccccccccccccccccccccccc
Confidence 467788899999999999999999 999999999999999999999999998643211
Q ss_pred -----------------CccccCCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccc
Q 019495 59 -----------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 121 (340)
Q Consensus 59 -----------------~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~ 121 (340)
....||+.|+|||++.+..++.++|||||||++|||++|+.||....................
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~ 256 (363)
T cd05628 177 NSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLI 256 (363)
T ss_pred ccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCccc
Confidence 124689999999999988899999999999999999999999976544332222211101111
Q ss_pred cCCCCCchhHHHHHHHHHHhhc--cCCCCCCCHHHHHH
Q 019495 122 LEGQFTDDDGTELVRLASRCLQ--YEPRERPNPKSLVT 157 (340)
Q Consensus 122 ~~~~~~~~~~~~l~~li~~cl~--~~p~~Rps~~~i~~ 157 (340)
++. ....+..+.+++.+++. .++..||++.+|+.
T Consensus 257 ~p~--~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~ 292 (363)
T cd05628 257 FPP--EVPISEKAKDLILRFCCEWEHRIGAPGVEEIKT 292 (363)
T ss_pred CCC--cCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhC
Confidence 111 12345778888887554 23334689999975
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.5e-27 Score=202.81 Aligned_cols=155 Identities=24% Similarity=0.355 Sum_probs=123.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
+++..+..++.||+.||.|||+++ ++|+||||+||+++.++.++++|||++....... ....+..|++||.+.+
T Consensus 100 ~~~~~~~~~~~~i~~al~~lh~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~ 178 (261)
T cd05034 100 LRLPQLVDMAAQIAEGMAYLESRN-YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANY 178 (261)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-cccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHHHhcc
Confidence 467888999999999999999999 9999999999999999999999999987654321 1223567999999998
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
..++.++|+||||++++++++ |+.||............... .....+...+..+.+++.+||+.+|++||++.+
T Consensus 179 ~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ 253 (261)
T cd05034 179 GRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERG-----YRMPRPPNCPEELYDLMLQCWDKDPEERPTFEY 253 (261)
T ss_pred CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHHHHcccCcccCCCHHH
Confidence 889999999999999999999 88887654332222111111 112233445678999999999999999999999
Q ss_pred HHHHhcc
Q 019495 155 LVTALSP 161 (340)
Q Consensus 155 i~~~L~~ 161 (340)
+...|+.
T Consensus 254 l~~~l~~ 260 (261)
T cd05034 254 LQSFLED 260 (261)
T ss_pred HHHHHhc
Confidence 9998875
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=7e-27 Score=213.55 Aligned_cols=152 Identities=16% Similarity=0.174 Sum_probs=119.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-----CccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~ 75 (340)
++..+...++.||+.||.|||+++ |+||||||+||+++.++.+||+|||++...... ....||+.|+|||++.+
T Consensus 139 l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 217 (370)
T cd05596 139 IPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKS 217 (370)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhcc
Confidence 356677889999999999999999 999999999999999999999999998765432 23468999999999865
Q ss_pred C----CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCC--chhHHHHHHHHHHhhccCCCC-
Q 019495 76 G----RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT--DDDGTELVRLASRCLQYEPRE- 148 (340)
Q Consensus 76 ~----~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~~p~~- 148 (340)
. .++.++|+|||||++|||++|+.||................ ....++ ...+..+.+++.+|++.+|++
T Consensus 218 ~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~----~~~~~~~~~~~s~~~~~li~~~L~~~p~r~ 293 (370)
T cd05596 218 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHK----NSLTFPDDIEISKQAKDLICAFLTDREVRL 293 (370)
T ss_pred CCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCC----CcCCCCCcCCCCHHHHHHHHHHccChhhcc
Confidence 3 37889999999999999999999987654432222221111 011122 235688999999999999988
Q ss_pred -CCCHHHHHH
Q 019495 149 -RPNPKSLVT 157 (340)
Q Consensus 149 -Rps~~~i~~ 157 (340)
|+++.+++.
T Consensus 294 ~R~s~~ell~ 303 (370)
T cd05596 294 GRNGVDEIKS 303 (370)
T ss_pred CCCCHHHHhc
Confidence 999999976
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.8e-27 Score=214.37 Aligned_cols=103 Identities=17% Similarity=0.302 Sum_probs=91.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCC--CCeEEeccCCCccCCCCC-ccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED--GNPRLSTFGLMKNSRDGK-SYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~--~~~kl~dfg~~~~~~~~~-~~~~~~~y~aPE~~~~~~ 77 (340)
|+......|+.||+.||.+||+.+ |||+||||+||||.+. ..+||+|||.+....... ++..++.|.|||++.|.+
T Consensus 286 lsl~~ir~~~~Qil~~L~~L~~l~-IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlp 364 (586)
T KOG0667|consen 286 LSLPLVRKFAQQILTALLFLHELG-IIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLP 364 (586)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeeccCChhheeeccCCcCceeEEecccccccCCcceeeeeccccccchhhccCC
Confidence 355667789999999999999999 9999999999999643 369999999998766543 567899999999999999
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcc
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSH 104 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~ 104 (340)
|+.+.||||||||+.||++|.+.|++.
T Consensus 365 Y~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 365 YDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred CCCccceeehhhhHHhHhcCccccCCC
Confidence 999999999999999999999888764
|
|
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.7e-27 Score=215.43 Aligned_cols=157 Identities=20% Similarity=0.298 Sum_probs=124.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
|+|...+.++.||+.||.|||+++ ++||||||+||++++++.+||+|||+++..... ....++..|++||++.
T Consensus 236 l~~~~~~~~~~qi~~aL~~LH~~~-ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 314 (401)
T cd05107 236 LSYMDLVGFSYQVANGMEFLASKN-CVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIF 314 (401)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCC-cCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhc
Confidence 467788999999999999999999 999999999999999999999999998754321 1234567899999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++|+||||+++|||++ |+.|+.............. .......+..++..+.+++.+||..+|..||+++
T Consensus 315 ~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~----~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ 390 (401)
T cd05107 315 NNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIK----RGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFS 390 (401)
T ss_pred CCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHH----cCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHH
Confidence 8888999999999999999998 7777654322211111111 1112233445678999999999999999999999
Q ss_pred HHHHHhccc
Q 019495 154 SLVTALSPL 162 (340)
Q Consensus 154 ~i~~~L~~~ 162 (340)
+|+..|+.+
T Consensus 391 ell~~L~~~ 399 (401)
T cd05107 391 QLVHLVGDL 399 (401)
T ss_pred HHHHHHHHH
Confidence 999998865
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.8e-27 Score=205.27 Aligned_cols=154 Identities=18% Similarity=0.238 Sum_probs=124.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC-CeEEeccCCCccCCCCCccccCCcccCcccccCCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVT 79 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 79 (340)
++|.....++.||+.||.|||+.+ ++||||||+||+++.++ .++++|||++..........++..|+|||++.+..++
T Consensus 106 l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 184 (267)
T PHA03390 106 LSEAEVKKIIRQLVEALNDLHKHN-IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCYDGTLDYFSPEKIKGHNYD 184 (267)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEeCCCCeEEEecCccceecCCCccCCCCCcccChhhhcCCCCC
Confidence 578899999999999999999999 99999999999999888 9999999998877666666788999999999988899
Q ss_pred CCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC-HHHHHH
Q 019495 80 PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN-PKSLVT 157 (340)
Q Consensus 80 ~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps-~~~i~~ 157 (340)
.++|+||||+++|+|++|+.||.......+.......... .....+...++.+.+++.+||+.+|.+||+ +++++.
T Consensus 185 ~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 185 VSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQ--KKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred chhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhc--ccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 9999999999999999999988643222211111111111 111233456789999999999999999996 688873
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-27 Score=216.67 Aligned_cols=163 Identities=23% Similarity=0.412 Sum_probs=134.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCcc----ccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY----STNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~----~~~~~y~aPE~~~~~ 76 (340)
++..++++++.+.+.||+|||+++ +|||||..+|+|++.++.+||+|||+++........ .-...|+|||.+..+
T Consensus 259 v~~~ek~~~~~~AA~Gl~YLh~k~-~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~ 337 (474)
T KOG0194|consen 259 LPTLEKLRFCYDAARGLEYLHSKN-CIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTG 337 (474)
T ss_pred CCHHHHHHHHHHHHhHHHHHHHCC-CcchhHhHHHheecCCCeEEeCccccccCCcceeeccccccCcceecChhhhccC
Confidence 567899999999999999999999 999999999999999999999999998876422111 134689999999999
Q ss_pred CCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i 155 (340)
.++.++|||||||++||+++ |..|+++............ ...+-..+...+..+..++.+||..+|++||+|.++
T Consensus 338 ~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~----~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i 413 (474)
T KOG0194|consen 338 IFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVK----NGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTI 413 (474)
T ss_pred ccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHh----cCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHH
Confidence 99999999999999999998 7778877655544433322 123334555677899999999999999999999999
Q ss_pred HHHhcccccCCCC
Q 019495 156 VTALSPLQKETEV 168 (340)
Q Consensus 156 ~~~L~~~~~~~~~ 168 (340)
...|+.+......
T Consensus 414 ~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 414 KKKLEALEKKKEA 426 (474)
T ss_pred HHHHHHHHhcccc
Confidence 9999888766544
|
|
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.6e-27 Score=206.19 Aligned_cols=155 Identities=22% Similarity=0.313 Sum_probs=121.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++..++.++.||+.||.|||+++ ++||||||+||+++.++.++|+|||++....... ....+..|+|||++.
T Consensus 127 l~~~~~~~~~~~i~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 205 (288)
T cd05050 127 LSCTEQLCIAKQVAAGMAYLSERK-FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIF 205 (288)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCC-eecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHh
Confidence 357788999999999999999999 9999999999999999999999999987543221 122356799999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++|+|||||++|+|++ |..||............ .... ....+..++..+.+++.+||+.+|++||++.
T Consensus 206 ~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~ 280 (288)
T cd05050 206 YNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYV----RDGN-VLSCPDNCPLELYNLMRLCWSKLPSDRPSFA 280 (288)
T ss_pred cCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH----hcCC-CCCCCCCCCHHHHHHHHHHcccCcccCCCHH
Confidence 8889999999999999999998 76676543322221111 1111 1112334568899999999999999999999
Q ss_pred HHHHHhcc
Q 019495 154 SLVTALSP 161 (340)
Q Consensus 154 ~i~~~L~~ 161 (340)
++++.|++
T Consensus 281 el~~~l~~ 288 (288)
T cd05050 281 SINRILQR 288 (288)
T ss_pred HHHHHhhC
Confidence 99998863
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.7e-27 Score=214.50 Aligned_cols=153 Identities=17% Similarity=0.159 Sum_probs=117.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----------------------
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---------------------- 58 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---------------------- 58 (340)
+++.....++.||+.||.|||+.+ |+||||||+|||++.+|.++|+|||+++.....
T Consensus 98 l~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (364)
T cd05599 98 FTEEETRFYIAETILAIDSIHKLG-YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFIS 176 (364)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEeecccceecccccccccccccccccccccccccc
Confidence 466788899999999999999999 999999999999999999999999987643211
Q ss_pred --------------------CccccCCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccc
Q 019495 59 --------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 118 (340)
Q Consensus 59 --------------------~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~ 118 (340)
....||+.|+|||++.+..++.++|||||||++|||++|..||................
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~- 255 (364)
T cd05599 177 KPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWK- 255 (364)
T ss_pred ccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCC-
Confidence 02358999999999988889999999999999999999999987654332221111110
Q ss_pred ccccCCCCCchhHHHHHHHHHHhhccCCCCCCC---HHHHHH
Q 019495 119 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPN---PKSLVT 157 (340)
Q Consensus 119 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps---~~~i~~ 157 (340)
..+........++.+.+++.+|+. +|.+|++ +.+++.
T Consensus 256 -~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 256 -ETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred -CccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 001111112346789999999996 9999998 777764
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.3e-27 Score=202.97 Aligned_cols=150 Identities=19% Similarity=0.281 Sum_probs=121.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~ 77 (340)
++...+.++.||+.||.|||+.+ ++|+||||+||+++.++.++++|||.+...... ....+++.|+|||++.+..
T Consensus 98 ~~~~~~~~~~~i~~al~~lH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~ 176 (255)
T cd08219 98 PEDTILQWFVQMCLGVQHIHEKR-VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMP 176 (255)
T ss_pred CHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEECCCCcEEEcccCcceeecccccccccccCCccccCHHHHccCC
Confidence 56677889999999999999999 999999999999999999999999998755432 2345788999999998888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
++.++|+||||+++|+|++|..||............... .....+...+..+.+++.+||+.||++||++.+++.
T Consensus 177 ~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 251 (255)
T cd08219 177 YNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQG-----SYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILS 251 (255)
T ss_pred cCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcC-----CCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhh
Confidence 999999999999999999999998765433222211111 111234455678999999999999999999999975
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-27 Score=221.32 Aligned_cols=156 Identities=20% Similarity=0.290 Sum_probs=116.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
|+|.+++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++..... ....||+.|++||++.
T Consensus 257 l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~ 335 (461)
T PHA03211 257 LGLAQVTAVARQLLSAIDYIHGEG-IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLA 335 (461)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHc
Confidence 578899999999999999999999 999999999999999999999999998754322 1245899999999999
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCcch------------hHHHhhhhhc--ccccc---------------ccCCC
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHA------------LDLIRDRNLQ--MLTDS---------------CLEGQ 125 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~~~------------~~~~~~~~~~--~~~~~---------------~~~~~ 125 (340)
+..++.++|||||||++|||++|..++.... ...+...... .+... .....
T Consensus 336 ~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 415 (461)
T PHA03211 336 GDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPA 415 (461)
T ss_pred CCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCc
Confidence 8889999999999999999999875442211 0011110000 00000 00000
Q ss_pred CC-------chhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 126 FT-------DDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 126 ~~-------~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.. ...+..+.+||.+||+.||.+|||+.|++.
T Consensus 416 ~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~ 454 (461)
T PHA03211 416 YTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLR 454 (461)
T ss_pred cCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence 00 012357889999999999999999999986
|
|
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-27 Score=213.10 Aligned_cols=153 Identities=17% Similarity=0.207 Sum_probs=118.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCccccc-
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLR- 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~- 74 (340)
+++.....++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++....... ...+|+.|+|||++.
T Consensus 99 l~~~~~~~~~~qi~~aL~~lH~~~-i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 177 (330)
T cd05601 99 FDEDMAQFYLAELVLAIHSVHQMG-YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTT 177 (330)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eEcccCchHheEECCCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhcc
Confidence 456778889999999999999999 9999999999999999999999999987654332 235789999999986
Q ss_pred -----CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCC
Q 019495 75 -----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 149 (340)
Q Consensus 75 -----~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R 149 (340)
...++.++|||||||++|+|++|..||................ ...........+..+.+++.+|+. +|.+|
T Consensus 178 ~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~li~~ll~-~p~~R 254 (330)
T cd05601 178 MNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQ--RFLKFPEDPKVSSDFLDLIQSLLC-GQKER 254 (330)
T ss_pred ccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCC--CccCCCCCCCCCHHHHHHHHHHcc-ChhhC
Confidence 3457889999999999999999999986654332222111110 001111122356789999999998 99999
Q ss_pred CCHHHHHH
Q 019495 150 PNPKSLVT 157 (340)
Q Consensus 150 ps~~~i~~ 157 (340)
|++.+++.
T Consensus 255 ~t~~~l~~ 262 (330)
T cd05601 255 LGYEGLCC 262 (330)
T ss_pred CCHHHHhC
Confidence 99999874
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.1e-27 Score=210.61 Aligned_cols=148 Identities=22% Similarity=0.312 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCcccccCC--
Q 019495 5 MRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTG-- 76 (340)
Q Consensus 5 ~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~-- 76 (340)
+...+-.||+.|+.++|..| |||.||||.|+|+-+ |.+||+|||++..+..++ +++||+.||+||.+...
T Consensus 461 ~lk~ywkqML~aV~~IH~~g-IVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s 538 (677)
T KOG0596|consen 461 FLKFYWKQMLLAVKTIHQHG-IVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSS 538 (677)
T ss_pred HHHHHHHHHHHHHHHHHHhc-eeecCCCcccEEEEe-eeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccc
Confidence 66678899999999999999 999999999999874 689999999998877664 45799999999988531
Q ss_pred ---------CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhH-HHHHHHHHHhhccCC
Q 019495 77 ---------RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG-TELVRLASRCLQYEP 146 (340)
Q Consensus 77 ---------~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~cl~~~p 146 (340)
+++.++||||+|||||+|+.|++||..-.. ....+..+.++...-++|..-. .++.++|+.||..||
T Consensus 539 ~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n---~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdP 615 (677)
T KOG0596|consen 539 SRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN---QIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDP 615 (677)
T ss_pred cccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH---HHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCc
Confidence 367899999999999999999988854211 1233455555544444443322 349999999999999
Q ss_pred CCCCCHHHHHH
Q 019495 147 RERPNPKSLVT 157 (340)
Q Consensus 147 ~~Rps~~~i~~ 157 (340)
++||+..++++
T Consensus 616 kkR~si~eLLq 626 (677)
T KOG0596|consen 616 KKRWSIPELLQ 626 (677)
T ss_pred ccCCCcHHHhc
Confidence 99999999985
|
|
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.5e-27 Score=205.73 Aligned_cols=156 Identities=21% Similarity=0.352 Sum_probs=119.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--CccccCCcccCcccccCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTGRV 78 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~~ 78 (340)
+++.....++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++...... ....++..|+|||++.+..+
T Consensus 92 ~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 170 (279)
T cd06619 92 IPEHVLGRIAVAVVKGLTYLWSLK-ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQY 170 (279)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCChhhcCceeecCCCC
Confidence 356778889999999999999999 999999999999999999999999998765433 23467889999999998889
Q ss_pred CCCcceehHHHHHHHHhhCCCCCCcchhHH---HhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHH
Q 019495 79 TPESVIYSFGTLLLDLLSGKHIPPSHALDL---IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155 (340)
Q Consensus 79 ~~~~Di~s~G~il~el~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i 155 (340)
+.++|+||||+++|+|++|+.||....... ......................++.+.+++.+||+.+|++||+++++
T Consensus 171 ~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~ei 250 (279)
T cd06619 171 GIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENL 250 (279)
T ss_pred CCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHH
Confidence 999999999999999999998875421100 00000111111111111122345789999999999999999999999
Q ss_pred HH
Q 019495 156 VT 157 (340)
Q Consensus 156 ~~ 157 (340)
+.
T Consensus 251 l~ 252 (279)
T cd06619 251 MD 252 (279)
T ss_pred hc
Confidence 85
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.4e-27 Score=207.57 Aligned_cols=153 Identities=20% Similarity=0.255 Sum_probs=121.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~ 76 (340)
+++.+...++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... ...+++.|+|||.+.+.
T Consensus 113 ~~~~~~~~i~~ql~~aL~~LH~~g-i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 191 (296)
T cd06654 113 MDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 191 (296)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEECccccchhccccccccCcccCCccccCHHHHcCC
Confidence 367788999999999999999999 9999999999999999999999999877543322 24578899999999888
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++|+|||||++|+|++|+.||.............. ........+...+..+.+++.+||..+|++||++.+++
T Consensus 192 ~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil 268 (296)
T cd06654 192 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT---NGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELL 268 (296)
T ss_pred CCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhc---CCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHh
Confidence 889999999999999999999999865433211111110 11111122334567899999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 269 ~ 269 (296)
T cd06654 269 Q 269 (296)
T ss_pred h
Confidence 6
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.5e-27 Score=207.39 Aligned_cols=154 Identities=18% Similarity=0.344 Sum_probs=121.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC---ccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~~~ 77 (340)
+++.....++.|++.||.|||+.+ |+||||||+||+++.++.++++|||++....... ...++..|+|||++.++.
T Consensus 99 l~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~ 177 (285)
T cd05630 99 FEEGRAVFYAAEICCGLEDLHQER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNER 177 (285)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCCCCCccccChHHHcCCC
Confidence 456788899999999999999999 9999999999999999999999999987654332 246789999999999888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC-----H
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN-----P 152 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps-----~ 152 (340)
++.++|+||||+++|+|++|..||....... .......... .....++..++..+.+++.+||+.||.+||| +
T Consensus 178 ~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~ 255 (285)
T cd05630 178 YTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEVERLVK-EVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGA 255 (285)
T ss_pred CCCccccHHHHHHHHHHHhCCCCCCCCCccc-hHHHHHhhhh-hhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCch
Confidence 9999999999999999999999886532110 0011111111 0112234456678999999999999999999 7
Q ss_pred HHHHH
Q 019495 153 KSLVT 157 (340)
Q Consensus 153 ~~i~~ 157 (340)
.+++.
T Consensus 256 ~~~~~ 260 (285)
T cd05630 256 REVKE 260 (285)
T ss_pred HHHHc
Confidence 78875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=204.19 Aligned_cols=159 Identities=17% Similarity=0.222 Sum_probs=127.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCcc------ccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY------STNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~------~~~~~y~aPE~~~ 74 (340)
+++...+.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++........ .++..|++||.+.
T Consensus 106 ~~~~~~~~~~~qi~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~ 184 (279)
T cd05057 106 IGSQYLLNWCVQIAKGMSYLEEKR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESIL 184 (279)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EEecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhh
Confidence 467889999999999999999999 999999999999999999999999998765433211 1245799999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
...++.++|+||||+++||+++ |+.|+.......+...... ......+..++..+.+++.+||..+|+.||++.
T Consensus 185 ~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~ 259 (279)
T cd05057 185 HRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEK-----GERLPQPPICTIDVYMVLVKCWMIDAESRPTFK 259 (279)
T ss_pred cCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhC-----CCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHH
Confidence 7888999999999999999998 8888765443332221111 111223444567899999999999999999999
Q ss_pred HHHHHhcccccC
Q 019495 154 SLVTALSPLQKE 165 (340)
Q Consensus 154 ~i~~~L~~~~~~ 165 (340)
++++.|..+.+.
T Consensus 260 ~l~~~l~~~~~~ 271 (279)
T cd05057 260 ELINEFSKMARD 271 (279)
T ss_pred HHHHHHHHHHhC
Confidence 999999887543
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-26 Score=204.74 Aligned_cols=156 Identities=19% Similarity=0.281 Sum_probs=121.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCcccccC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~ 75 (340)
++.....++.||+.||.|||+++ |+||||||+||+++.++.++++|||+++...... ...++..|++||.+.+
T Consensus 117 ~~~~~~~~~~~l~~~l~~lH~~~-i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~ 195 (288)
T cd05061 117 TLQEMIQMAAEIADGMAYLNAKK-FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD 195 (288)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC-CcCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhcc
Confidence 35677889999999999999999 9999999999999999999999999987543321 1234567999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+.++.++|+|||||++|||++ |..|+.............. . .....+..++..+.+++.+||+.+|++|||+.+
T Consensus 196 ~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 270 (288)
T cd05061 196 GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD----G-GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLE 270 (288)
T ss_pred CCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc----C-CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHH
Confidence 889999999999999999998 5666654332222211111 1 111233445688999999999999999999999
Q ss_pred HHHHhcccc
Q 019495 155 LVTALSPLQ 163 (340)
Q Consensus 155 i~~~L~~~~ 163 (340)
+++.|....
T Consensus 271 ll~~l~~~~ 279 (288)
T cd05061 271 IVNLLKDDL 279 (288)
T ss_pred HHHHHHhhc
Confidence 999888753
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.5e-27 Score=211.85 Aligned_cols=153 Identities=20% Similarity=0.264 Sum_probs=120.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCC----CCCccccCCcccCccccc--
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----DGKSYSTNLAFTPPEYLR-- 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~----~~~~~~~~~~y~aPE~~~-- 74 (340)
|...+.--+++|+++||.|||++. |||||||..|||++-+|.++|+|||++.... ...++.||+.|||||+..
T Consensus 127 LtE~QIqvvc~q~ldALn~LHs~~-iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCE 205 (1187)
T KOG0579|consen 127 LTEDQIQVVCYQVLDALNWLHSQN-IIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCE 205 (1187)
T ss_pred cchHHHHHHHHHHHHHHHHHhhcc-hhhhhccccceEEEecCcEeeecccccccchhHHhhhccccCCcccccchheeec
Confidence 345566678999999999999999 9999999999999999999999999865322 235789999999999874
Q ss_pred ---CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 75 ---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 75 ---~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
..+|+.++||||||++|.||..+.+|..........-.. ..--++.+ ..|...+..+.+++.+||..||+.||+
T Consensus 206 T~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKi-aKSePPTL--lqPS~Ws~~F~DfLk~cL~Knp~~Rp~ 282 (1187)
T KOG0579|consen 206 TFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI-AKSEPPTL--LQPSHWSRSFSDFLKRCLVKNPRNRPP 282 (1187)
T ss_pred cccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHH-hhcCCCcc--cCcchhhhHHHHHHHHHHhcCCccCCC
Confidence 357999999999999999999998776554332221111 11111111 135556788999999999999999999
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.+++.
T Consensus 283 aaqll~ 288 (1187)
T KOG0579|consen 283 AAQLLK 288 (1187)
T ss_pred HHHHhh
Confidence 998874
|
|
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=202.48 Aligned_cols=151 Identities=20% Similarity=0.371 Sum_probs=121.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----------CccccCCcccCc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----------KSYSTNLAFTPP 70 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----------~~~~~~~~y~aP 70 (340)
+++.....++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||+++..... ....++..|++|
T Consensus 103 l~~~~~~~~~~~l~~~l~~lH~~~-ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~p 181 (267)
T cd06628 103 FEETLVRNFVRQILKGLNYLHNRG-IIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAP 181 (267)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcC-cccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccCh
Confidence 456778899999999999999999 999999999999999999999999988765421 123467889999
Q ss_pred ccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC
Q 019495 71 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150 (340)
Q Consensus 71 E~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 150 (340)
|++.+..++.++|+||||+++|+|++|..||........... ... ......+...+..+.+++.+||+.||++||
T Consensus 182 e~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 256 (267)
T cd06628 182 EVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFK-IGE----NASPEIPSNISSEAIDFLEKTFEIDHNKRP 256 (267)
T ss_pred hHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHH-Hhc----cCCCcCCcccCHHHHHHHHHHccCCchhCc
Confidence 999888889999999999999999999998865322111110 011 122234455678899999999999999999
Q ss_pred CHHHHHH
Q 019495 151 NPKSLVT 157 (340)
Q Consensus 151 s~~~i~~ 157 (340)
++.+|+.
T Consensus 257 ~~~~il~ 263 (267)
T cd06628 257 TAAELLK 263 (267)
T ss_pred CHHHHhh
Confidence 9999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-26 Score=202.59 Aligned_cols=156 Identities=22% Similarity=0.283 Sum_probs=122.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc---c---c---cCCcccCcc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS---Y---S---TNLAFTPPE 71 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~---~---~---~~~~y~aPE 71 (340)
+++.+.+.++.|++.||.|||+++ ++||||||+||+++.++.++++|||++........ . . .+..|++||
T Consensus 103 ~~~~~~~~i~~~l~~al~~lH~~g-~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE 181 (269)
T cd05065 103 FTVIQLVGMLRGIAAGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPE 181 (269)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHh
Confidence 467788999999999999999999 99999999999999999999999998875433211 1 1 134799999
Q ss_pred cccCCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC
Q 019495 72 YLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150 (340)
Q Consensus 72 ~~~~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 150 (340)
++.++.++.++||||||+++||+++ |..||............... .....+..++..+.+++.+||+.+|++||
T Consensus 182 ~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 256 (269)
T cd05065 182 AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQD-----YRLPPPMDCPTALHQLMLDCWQKDRNARP 256 (269)
T ss_pred HhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-----CcCCCcccCCHHHHHHHHHHcCCChhhCc
Confidence 9988889999999999999999886 88887654332222111111 11123345567899999999999999999
Q ss_pred CHHHHHHHhccc
Q 019495 151 NPKSLVTALSPL 162 (340)
Q Consensus 151 s~~~i~~~L~~~ 162 (340)
++.+|+..|+.+
T Consensus 257 ~~~~i~~~l~~~ 268 (269)
T cd05065 257 KFGQIVSTLDKM 268 (269)
T ss_pred CHHHHHHHHHhh
Confidence 999999988754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-26 Score=202.42 Aligned_cols=158 Identities=22% Similarity=0.308 Sum_probs=125.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc-----cccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-----YSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~y~aPE~~~~ 75 (340)
+++.+++.++.||+.||.|||+.+ ++||||||+||+++.++.++++|||+++....... ..++..|+|||.+.+
T Consensus 104 ~~~~~~~~~~~~l~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 182 (270)
T cd05056 104 LDLASLILYSYQLSTALAYLESKR-FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINF 182 (270)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeccccChheEEEecCCCeEEccCceeeecccccceecCCCCccccccChhhhcc
Confidence 467889999999999999999999 99999999999999999999999999876543321 123457999999987
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
..++.++|+||||++++++++ |..||............ .. ......+..++..+.+++.+|+..+|++||++.+
T Consensus 183 ~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ 257 (270)
T cd05056 183 RRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRI-EN----GERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTE 257 (270)
T ss_pred CCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH-Hc----CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 888999999999999999986 88887654332221111 11 0111234556789999999999999999999999
Q ss_pred HHHHhccccc
Q 019495 155 LVTALSPLQK 164 (340)
Q Consensus 155 i~~~L~~~~~ 164 (340)
++..|..+..
T Consensus 258 ~~~~l~~~~~ 267 (270)
T cd05056 258 LKAQLSDILQ 267 (270)
T ss_pred HHHHHHHHHh
Confidence 9999887643
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-26 Score=204.80 Aligned_cols=152 Identities=20% Similarity=0.229 Sum_probs=121.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCccccCCcccCccccc---CCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLR---TGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~---~~~ 77 (340)
+++.+...++.||+.||.|||+.+ ++||||+|+||+++.++.++|+|||++..........++..|+|||++. .+.
T Consensus 112 l~~~~~~~~~~ql~~~L~~LH~~~-i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 190 (307)
T cd06607 112 LQEVEIAAICHGALQGLAYLHSHE-RIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVGTPYWMAPEVILAMDEGQ 190 (307)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEECCCCCEEEeecCcceecCCCCCccCCccccCceeeeccCCCC
Confidence 467888999999999999999999 9999999999999999999999999988766666677888999999874 345
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
++.++||||||+++|+|++|..|+............... ......+...+..+.+++.+||+.+|++||++.+|+.
T Consensus 191 ~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 191 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----DSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred CCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC----CCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 788999999999999999999887654322211111110 0011112235578999999999999999999999985
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=202.06 Aligned_cols=156 Identities=19% Similarity=0.253 Sum_probs=123.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCccccCCcccCcccccCCCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTP 80 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 80 (340)
+++.+...++.||+.||.|||+.+ ++||||+|+||+++.++.++++|||+++.........++..|++||.+.+..++.
T Consensus 94 ~~~~~~~~i~~qi~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~ 172 (260)
T cd05611 94 LPEDWAKQYIAEVVLGVEDLHQRG-IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLAPETILGVGDDK 172 (260)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcCccChhhhcCCCCcc
Confidence 467788899999999999999999 9999999999999999999999999988765555567888999999998877899
Q ss_pred CcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHHHh
Q 019495 81 ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 159 (340)
Q Consensus 81 ~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L 159 (340)
++|+||||+++|+|++|..||................. .........++..+.+++.+||+.+|++||++.++.+.|
T Consensus 173 ~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 173 MSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRI--NWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred hhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhccc--CCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 99999999999999999998865433322211111110 111122334568899999999999999999776554433
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-26 Score=200.31 Aligned_cols=153 Identities=19% Similarity=0.239 Sum_probs=120.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~ 76 (340)
++|.....++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++....... ...++..|++||++.+.
T Consensus 96 l~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~ 174 (256)
T cd06612 96 LTEEEIAAILYQTLKGLEYLHSNK-KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEI 174 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEECCCCcEEEcccccchhcccCccccccccCCccccCHHHHhcC
Confidence 468889999999999999999999 9999999999999999999999999987654332 23467899999999888
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++||||||+++|+|++|+.|+.............. . .......+...+..+.+++.+||+.+|++||++.+++
T Consensus 175 ~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il 251 (256)
T cd06612 175 GYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPN-K--PPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLL 251 (256)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhcc-C--CCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHh
Confidence 899999999999999999999988765322111111000 0 0011112334557899999999999999999999997
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 252 ~ 252 (256)
T cd06612 252 Q 252 (256)
T ss_pred c
Confidence 5
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=205.44 Aligned_cols=153 Identities=21% Similarity=0.284 Sum_probs=120.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.+...++.||+.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....++..|+|||++.+.
T Consensus 115 l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 193 (292)
T cd06658 115 MNEEQIATVCLSVLRALSYLHNQG-VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRL 193 (292)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCccccCHHHHccC
Confidence 467888999999999999999999 999999999999999999999999987654322 234578899999999888
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++|+||||+++||+++|..||........... .....+..+ ......+..+.+++.+||..||.+|||+.+++
T Consensus 194 ~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il 270 (292)
T cd06658 194 PYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRR-IRDNLPPRV--KDSHKVSSVLRGFLDLMLVREPSQRATAQELL 270 (292)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhcCCCcc--ccccccCHHHHHHHHHHccCChhHCcCHHHHh
Confidence 889999999999999999999998865432221111 111111111 11223457899999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 271 ~ 271 (292)
T cd06658 271 Q 271 (292)
T ss_pred h
Confidence 6
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-26 Score=211.70 Aligned_cols=154 Identities=21% Similarity=0.236 Sum_probs=116.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC-----------------------
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----------------------- 57 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----------------------- 57 (340)
+++.....++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 98 ~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (381)
T cd05626 98 FPEVLARFYIAELTLAIESVHKMG-FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDL 176 (381)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCcccc
Confidence 356677788999999999999999 99999999999999999999999998653210
Q ss_pred ----------------------------CCccccCCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHH
Q 019495 58 ----------------------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI 109 (340)
Q Consensus 58 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~ 109 (340)
..+..||+.|+|||++.+..++.++|||||||++|||++|..||........
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~ 256 (381)
T cd05626 177 WDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTET 256 (381)
T ss_pred cccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHH
Confidence 0124688999999999888899999999999999999999999876543322
Q ss_pred hhhhhccccccccCCCCCchhHHHHHHHHHH--hhccCCCCCCCHHHHHH
Q 019495 110 RDRNLQMLTDSCLEGQFTDDDGTELVRLASR--CLQYEPRERPNPKSLVT 157 (340)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~--cl~~~p~~Rps~~~i~~ 157 (340)
....... ............++++.+++.+ |+..++..|+++.+++.
T Consensus 257 ~~~i~~~--~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 257 QLKVINW--ENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKA 304 (381)
T ss_pred HHHHHcc--ccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 2111110 0011111122356789999988 55566667999999986
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-26 Score=204.70 Aligned_cols=153 Identities=19% Similarity=0.244 Sum_probs=121.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~ 76 (340)
+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... ...++..|++||.+.+.
T Consensus 112 l~~~~~~~i~~~l~~al~~LH~~~-i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 190 (296)
T cd06655 112 MDEAQIAAVCRECLQALEFLHANQ-VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 190 (296)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcCCCccccCcchhcCC
Confidence 478899999999999999999999 9999999999999999999999999877544332 23567899999999888
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++|+|||||++|+|++|..||............... .......+..++..+.+++.+||..||.+||++.+++
T Consensus 191 ~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il 267 (296)
T cd06655 191 AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN---GTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELL 267 (296)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc---CCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHh
Confidence 8899999999999999999999988654322111111000 0111122344567899999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 268 ~ 268 (296)
T cd06655 268 Q 268 (296)
T ss_pred h
Confidence 4
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.3e-27 Score=208.48 Aligned_cols=156 Identities=20% Similarity=0.360 Sum_probs=117.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccC-
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRT- 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~- 75 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+++.|+|||++.+
T Consensus 101 ~~~~~~~~~~~qi~~aL~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 179 (309)
T cd07872 101 MSMHNVKIFLYQILRGLAYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGS 179 (309)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECccccceecCCCccccccccccccccCCHHHhCC
Confidence 356778889999999999999999 999999999999999999999999998754322 12356889999999865
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccc--------------------cccccCC----CCCchhH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML--------------------TDSCLEG----QFTDDDG 131 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~----~~~~~~~ 131 (340)
..++.++||||||+++|+|+||+.||...............+ ..+.... ......+
T Consensus 180 ~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (309)
T cd07872 180 SEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLD 259 (309)
T ss_pred CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCC
Confidence 457889999999999999999999887643321111110000 0000000 0112346
Q ss_pred HHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 132 TELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 132 ~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
..+.+++.+|++.||.+|||+.+++.
T Consensus 260 ~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 260 TEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred HHHHHHHHHhccCChhhCCCHHHHhc
Confidence 78899999999999999999999985
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-26 Score=210.37 Aligned_cols=152 Identities=16% Similarity=0.180 Sum_probs=117.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-----CccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~ 75 (340)
+++.+...++.||+.||.|||+++ |+||||||+||+++.++.+||+|||++...... ....||+.|+|||++.+
T Consensus 139 ~~~~~~~~~~~qil~aL~~LH~~~-IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~ 217 (370)
T cd05621 139 VPEKWAKFYTAEVVLALDAIHSMG-LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKS 217 (370)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhc
Confidence 356778889999999999999999 999999999999999999999999998765432 24468999999999875
Q ss_pred C----CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCC--chhHHHHHHHHHHhhccCCCC-
Q 019495 76 G----RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT--DDDGTELVRLASRCLQYEPRE- 148 (340)
Q Consensus 76 ~----~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~~p~~- 148 (340)
. .++.++|+||+||++|+|++|+.||............... .....++ ...+..+.+++.+|+..++.+
T Consensus 218 ~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~----~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~ 293 (370)
T cd05621 218 QGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDH----KNSLNFPEDVEISKHAKNLICAFLTDREVRL 293 (370)
T ss_pred cCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhC----CcccCCCCcccCCHHHHHHHHHHccCchhcc
Confidence 3 3788999999999999999999999765433222221111 1111122 234678999999999865544
Q ss_pred -CCCHHHHHH
Q 019495 149 -RPNPKSLVT 157 (340)
Q Consensus 149 -Rps~~~i~~ 157 (340)
|+++.+++.
T Consensus 294 ~R~~~~e~l~ 303 (370)
T cd05621 294 GRNGVEEIKQ 303 (370)
T ss_pred CCCCHHHHhc
Confidence 889999886
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-26 Score=200.57 Aligned_cols=155 Identities=17% Similarity=0.282 Sum_probs=122.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHh-CCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~-~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~ 76 (340)
+++..+..++.|++.||.|||+ .+ ++|+||+|.||+++.++.++|+|||.+...... ....++..|++||++.++
T Consensus 110 ~~~~~~~~~~~~l~~~l~~lh~~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~ 188 (269)
T cd08528 110 FTEERIWNIFVQMVLALRYLHKEKR-IVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNE 188 (269)
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCc-eeecCCCHHHEEECCCCcEEEecccceeecccccccccccCcccCcChhhhcCC
Confidence 3567889999999999999996 56 999999999999999999999999998765443 234578899999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++|+||||+++|+|++|..|+................. .+......+..+.+++.+||+.||++||++.++.
T Consensus 189 ~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~ 264 (269)
T cd08528 189 PYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVY----EPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVS 264 (269)
T ss_pred CCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccC----CcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHH
Confidence 899999999999999999999988755433222221111111 1111123457899999999999999999999999
Q ss_pred HHhc
Q 019495 157 TALS 160 (340)
Q Consensus 157 ~~L~ 160 (340)
..+.
T Consensus 265 ~~~~ 268 (269)
T cd08528 265 AMIS 268 (269)
T ss_pred HHhc
Confidence 8775
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-26 Score=202.00 Aligned_cols=155 Identities=19% Similarity=0.207 Sum_probs=117.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCccccc--
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLR-- 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~-- 74 (340)
+++..+..++.|++.||.|||+.+ |+||||||.||+++.++.++|+|||++...... ....++..|+|||.+.
T Consensus 103 ~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~ 181 (267)
T cd06646 103 LSELQIAYVCRETLQGLAYLHSKG-KMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVE 181 (267)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEECcCccceeecccccccCccccCccccCHhHcccc
Confidence 356788899999999999999999 999999999999999999999999998754322 2345778999999884
Q ss_pred -CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhh-hccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 75 -TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 75 -~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
...++.++|+||||+++|||++|+.|+............ ......+.. ......+..+.+++.+||+.+|++||++
T Consensus 182 ~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~P~~Rp~~ 259 (267)
T cd06646 182 KNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKL--KDKTKWSSTFHNFVKISLTKNPKKRPTA 259 (267)
T ss_pred cCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCC--ccccccCHHHHHHHHHHhhCChhhCcCH
Confidence 345788999999999999999999887543211110000 000111111 1122345789999999999999999999
Q ss_pred HHHHHH
Q 019495 153 KSLVTA 158 (340)
Q Consensus 153 ~~i~~~ 158 (340)
++|+..
T Consensus 260 ~~il~~ 265 (267)
T cd06646 260 ERLLTH 265 (267)
T ss_pred HHHhcC
Confidence 999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-26 Score=206.61 Aligned_cols=153 Identities=20% Similarity=0.191 Sum_probs=120.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCC------------------------
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR------------------------ 56 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~------------------------ 56 (340)
|+..+.--++.+++.|+.-+|..| +|||||||+|+|||..|++||+|||++....
T Consensus 238 L~e~~arfYiaE~vlAI~~iH~~g-yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (550)
T KOG0605|consen 238 LTEDWARFYIAETVLAIESIHQLG-YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPS 316 (550)
T ss_pred CchHHHHHHHHHHHHHHHHHHHcC-cccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCc
Confidence 456667778999999999999999 9999999999999999999999999975310
Q ss_pred --C-----C--------------------CccccCCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHH
Q 019495 57 --D-----G--------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI 109 (340)
Q Consensus 57 --~-----~--------------------~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~ 109 (340)
+ . .+.+|||-|||||++.+.+|+..+|.||||||+|||+.|-+||.++.....
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T 396 (550)
T KOG0605|consen 317 DFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQET 396 (550)
T ss_pred cccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 0 0 013578999999999999999999999999999999999999988766655
Q ss_pred hhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC---HHHHHH
Q 019495 110 RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN---PKSLVT 157 (340)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps---~~~i~~ 157 (340)
-...+..-. .+..+-...++.+..+||.+|+. ||++|.. +.||..
T Consensus 397 ~rkI~nwr~--~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~ 444 (550)
T KOG0605|consen 397 YRKIVNWRE--TLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKK 444 (550)
T ss_pred HHHHHHHhh--hccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhc
Confidence 444332211 11111122345889999999999 9999964 666654
|
|
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-26 Score=210.24 Aligned_cols=154 Identities=18% Similarity=0.174 Sum_probs=116.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-----CccccCCcccCcccccCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~ 76 (340)
+..+...++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....||+.|+|||++.+.
T Consensus 140 ~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 218 (371)
T cd05622 140 PEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQ 218 (371)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhcc
Confidence 55677889999999999999999 999999999999999999999999998765432 244689999999998753
Q ss_pred ----CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCC--CC
Q 019495 77 ----RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRE--RP 150 (340)
Q Consensus 77 ----~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~--Rp 150 (340)
.++.++|||||||++|||++|..||.................. .........+..+.+++.+|+..++.+ |+
T Consensus 219 ~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~ 296 (371)
T cd05622 219 GGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS--LTFPDDNDISKEAKNLICAFLTDREVRLGRN 296 (371)
T ss_pred CCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCc--ccCCCcCCCCHHHHHHHHHHcCChhhhcCCC
Confidence 3788999999999999999999999765443222222111110 111112345688999999999844433 67
Q ss_pred CHHHHHHH
Q 019495 151 NPKSLVTA 158 (340)
Q Consensus 151 s~~~i~~~ 158 (340)
++.++++.
T Consensus 297 ~~~ei~~h 304 (371)
T cd05622 297 GVEEIKRH 304 (371)
T ss_pred CHHHHhcC
Confidence 88888763
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-26 Score=201.85 Aligned_cols=152 Identities=13% Similarity=0.171 Sum_probs=117.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC----CCccccCCcccCcccccC-
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNLAFTPPEYLRT- 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~- 75 (340)
+++.+...++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..... .....++..|+|||++..
T Consensus 118 ~~~~~~~~~~~qi~~al~~LH~~~-ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~ 196 (282)
T cd06636 118 LKEDWIAYICREILRGLAHLHAHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACD 196 (282)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcc
Confidence 356678889999999999999999 99999999999999999999999998765432 123457889999999862
Q ss_pred ----CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 76 ----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 76 ----~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
..++.++|+||||+++|+|++|..||........... .............++..+.++|.+||+.||.+||+
T Consensus 197 ~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~ 272 (282)
T cd06636 197 ENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFL----IPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPS 272 (282)
T ss_pred cCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhh----HhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcC
Confidence 4578899999999999999999988854322111111 11111111112345678999999999999999999
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.+++.
T Consensus 273 ~~ell~ 278 (282)
T cd06636 273 TEQLLK 278 (282)
T ss_pred HHHHhc
Confidence 999874
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=219.85 Aligned_cols=153 Identities=20% Similarity=0.246 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccCCCC
Q 019495 4 AMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRTGRV 78 (340)
Q Consensus 4 ~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~ 78 (340)
.....|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++...... ...||..|+|||++.+..+
T Consensus 267 ~~~~~i~~ql~~aL~yLH~~g-IiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 345 (501)
T PHA03210 267 KQTRAIMKQLLCAVEYIHDKK-LIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGY 345 (501)
T ss_pred HHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCC
Confidence 345679999999999999999 9999999999999999999999999997654332 3468999999999998889
Q ss_pred CCCcceehHHHHHHHHhhCCCCCCcchh----HHHhhh-hhccccccccC-------------------CCC-----Cch
Q 019495 79 TPESVIYSFGTLLLDLLSGKHIPPSHAL----DLIRDR-NLQMLTDSCLE-------------------GQF-----TDD 129 (340)
Q Consensus 79 ~~~~Di~s~G~il~el~~g~~~~~~~~~----~~~~~~-~~~~~~~~~~~-------------------~~~-----~~~ 129 (340)
+.++|||||||++|||++|..++..... ..+... .........+. ..+ ...
T Consensus 346 ~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 425 (501)
T PHA03210 346 CEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLG 425 (501)
T ss_pred CcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcC
Confidence 9999999999999999999865432211 000000 00000000000 000 011
Q ss_pred hHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 130 DGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 130 ~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.+..+.+++.+||+.||.+|||+.|++.
T Consensus 426 ~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 426 LPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred CChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 3356788899999999999999999985
|
|
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-26 Score=208.72 Aligned_cols=148 Identities=20% Similarity=0.265 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCccccCCcccCccccc---CCCCCC
Q 019495 4 AMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLR---TGRVTP 80 (340)
Q Consensus 4 ~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~ 80 (340)
-+.-.|..+.+.||.|||+.+ .||||||..|||+++.|.|||+|||.+....+..+++|||.|||||++. .|.|+-
T Consensus 126 vEIAAi~~gaL~gLaYLHS~~-~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGTPywMAPEVILAMDEGqYdg 204 (948)
T KOG0577|consen 126 VEIAAITHGALQGLAYLHSHN-RIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDG 204 (948)
T ss_pred HHHHHHHHHHHHHHHHHHHhh-HHhhhccccceEecCCCeeeeccccchhhcCchhcccCCccccchhHheeccccccCC
Confidence 345568899999999999999 9999999999999999999999999999999999999999999999985 378999
Q ss_pred CcceehHHHHHHHHhhCCCCCCcchhH-HHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 81 ESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 81 ~~Di~s~G~il~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+.||||||+++.||...++|....... .+..-. ..-.|.+ .....+..+..++..||+.-|..|||..+++.
T Consensus 205 kvDvWSLGITCIELAERkPPlFnMNAMSALYHIA--QNesPtL---qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 205 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIA--QNESPTL---QSNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred ccceeeccchhhhhhhcCCCccCchHHHHHHHHH--hcCCCCC---CCchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 999999999999999999876553221 111111 1111111 13345678999999999999999999988763
|
|
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-26 Score=198.82 Aligned_cols=154 Identities=17% Similarity=0.202 Sum_probs=119.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++..|++||.+.+.
T Consensus 98 l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~ 176 (262)
T cd06613 98 LSELQIAYVCRETLKGLAYLHETG-KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVE 176 (262)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-ceecCCChhhEEECCCCCEEECccccchhhhhhhhccccccCCccccCchhhccc
Confidence 466788899999999999999999 999999999999999999999999988754432 234567889999999766
Q ss_pred ---CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhh-hccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 77 ---RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 77 ---~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.++.++|+||||+++|+|++|..|+............ ........ ...+...+..+.+++.+||..+|..||++
T Consensus 177 ~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~ 254 (262)
T cd06613 177 RKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPK--LKDKEKWSPVFHDFIKKCLTKDPKKRPTA 254 (262)
T ss_pred ccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCcc--ccchhhhhHHHHHHHHHHcCCChhhCCCH
Confidence 7889999999999999999999888654322111111 11111111 11233456789999999999999999999
Q ss_pred HHHHH
Q 019495 153 KSLVT 157 (340)
Q Consensus 153 ~~i~~ 157 (340)
.+|+.
T Consensus 255 ~~il~ 259 (262)
T cd06613 255 TKLLQ 259 (262)
T ss_pred HHHhc
Confidence 99874
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.5e-27 Score=212.79 Aligned_cols=153 Identities=14% Similarity=0.155 Sum_probs=115.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----------------------
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---------------------- 58 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---------------------- 58 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.+|.++|+|||+++.....
T Consensus 98 l~~~~~~~~~~qi~~~L~~lH~~g-ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (360)
T cd05627 98 LSEEATQFYIAETVLAIDAIHQLG-FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNM 176 (360)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCccccccccc
Confidence 356677889999999999999999 999999999999999999999999987643211
Q ss_pred -----------------CccccCCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccc
Q 019495 59 -----------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 121 (340)
Q Consensus 59 -----------------~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~ 121 (340)
....||+.|+|||++.+..++.++|+|||||++|||++|..||....................
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~ 256 (360)
T cd05627 177 NSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLV 256 (360)
T ss_pred ccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCcee
Confidence 124588999999999988899999999999999999999999876544332222211100001
Q ss_pred cCCCCCchhHHHHHHHHHHhhccCCCCCCC---HHHHHH
Q 019495 122 LEGQFTDDDGTELVRLASRCLQYEPRERPN---PKSLVT 157 (340)
Q Consensus 122 ~~~~~~~~~~~~l~~li~~cl~~~p~~Rps---~~~i~~ 157 (340)
+.. ....+..+.+++.+|+ .+|.+|++ +.+++.
T Consensus 257 ~p~--~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 257 FPP--EVPISEKAKDLILRFC-TDSENRIGSNGVEEIKS 292 (360)
T ss_pred cCC--CCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhc
Confidence 111 1124578899998877 49999985 556553
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=204.57 Aligned_cols=156 Identities=20% Similarity=0.251 Sum_probs=116.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++....... ...+++.|+|||++.+.
T Consensus 98 ~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 176 (285)
T cd07861 98 MDAELVKSYLYQILQGILFCHSRR-VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGS 176 (285)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccCCcccccccChHHhcCC
Confidence 467788899999999999999999 9999999999999999999999999987543221 23457889999998754
Q ss_pred -CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhc--------------------ccccccc---CCCCCchhHH
Q 019495 77 -RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------------MLTDSCL---EGQFTDDDGT 132 (340)
Q Consensus 77 -~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~--------------------~~~~~~~---~~~~~~~~~~ 132 (340)
.++.++|+||||+++|+|+||+.||.............. ...+... ........+.
T Consensus 177 ~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (285)
T cd07861 177 PRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDE 256 (285)
T ss_pred CCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCH
Confidence 468899999999999999999988864322111100000 0000000 0011223567
Q ss_pred HHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 133 ELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 133 ~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
++.+++.+||+.||++|||+.+|+.
T Consensus 257 ~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 257 DGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HHHHHHHHHhcCChhhCCCHHHHhc
Confidence 8899999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-26 Score=201.91 Aligned_cols=151 Identities=19% Similarity=0.312 Sum_probs=121.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.|++.||.|||+++ ++||||+|+||+++.++.++++|||+++..... ....++..|++||++.+.
T Consensus 95 ~~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~ 173 (274)
T cd06609 95 LDETYIAFILREVLLGLEYLHEEG-KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQS 173 (274)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEcccccceeecccccccccccCCccccChhhhccC
Confidence 467889999999999999999999 999999999999999999999999998765433 234567889999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCch-hHHHHHHHHHHhhccCCCCCCCHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD-DGTELVRLASRCLQYEPRERPNPKSL 155 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~~p~~Rps~~~i 155 (340)
.++.++|+||||+++|+|++|..||............. .......+.. ++..+.+++.+||..+|++||+++++
T Consensus 174 ~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~i 248 (274)
T cd06609 174 GYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIP-----KNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKEL 248 (274)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhh-----hcCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHH
Confidence 89999999999999999999998885432211111111 1111122222 56789999999999999999999999
Q ss_pred HH
Q 019495 156 VT 157 (340)
Q Consensus 156 ~~ 157 (340)
+.
T Consensus 249 l~ 250 (274)
T cd06609 249 LK 250 (274)
T ss_pred hh
Confidence 75
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6e-26 Score=203.29 Aligned_cols=157 Identities=19% Similarity=0.228 Sum_probs=124.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCccccCCcccCccccc---CCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLR---TGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~---~~~ 77 (340)
++|.++..++.||+.||.|||+.+ |+||||+|+||+++.++.++|+|||++..........++..|++||++. .+.
T Consensus 122 l~~~~~~~i~~~i~~~l~~lH~~~-i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 200 (317)
T cd06635 122 LQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTPYWMAPEVILAMDEGQ 200 (317)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcccEEECCCCCEEEecCCCccccCCcccccCCccccChhhhhcCCCCC
Confidence 467888999999999999999999 9999999999999999999999999987766666677889999999974 356
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
++.++|+|||||++|+|++|..||............... ......+...+..+.+++.+||+.+|.+||++.+|+.
T Consensus 201 ~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 276 (317)
T cd06635 201 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLK 276 (317)
T ss_pred CCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhc----cCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHh
Confidence 888999999999999999999887654222111111111 1111122335578999999999999999999999986
Q ss_pred Hhccc
Q 019495 158 ALSPL 162 (340)
Q Consensus 158 ~L~~~ 162 (340)
.+-..
T Consensus 277 ~~~~~ 281 (317)
T cd06635 277 HMFVL 281 (317)
T ss_pred Chhhh
Confidence 44433
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-26 Score=200.20 Aligned_cols=156 Identities=21% Similarity=0.277 Sum_probs=123.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc-------cccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-------YSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~-------~~~~~~y~aPE~~ 73 (340)
+++.+.+.++.|++.||.|||+++ ++||||||+||+++.++.++++|||++........ ...+..|++||++
T Consensus 103 ~~~~~~~~i~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~ 181 (267)
T cd05066 103 FTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 181 (267)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHh
Confidence 467888999999999999999999 99999999999999999999999999876543321 1124579999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.++.++.++|+||||+++|++++ |..||............... .....+..++..+.+++.+||+.+|.+||++
T Consensus 182 ~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~ 256 (267)
T cd05066 182 AYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEG-----YRLPAPMDCPAALHQLMLDCWQKDRNERPKF 256 (267)
T ss_pred ccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCC-----CcCCCCCCCCHHHHHHHHHHcccCchhCCCH
Confidence 88889999999999999999886 88887654322221111111 1112234456789999999999999999999
Q ss_pred HHHHHHhccc
Q 019495 153 KSLVTALSPL 162 (340)
Q Consensus 153 ~~i~~~L~~~ 162 (340)
.++++.|..+
T Consensus 257 ~~i~~~l~~~ 266 (267)
T cd05066 257 EQIVSILDKL 266 (267)
T ss_pred HHHHHHHHhh
Confidence 9999988764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-26 Score=200.54 Aligned_cols=154 Identities=18% Similarity=0.192 Sum_probs=117.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCccccc--
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLR-- 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~-- 74 (340)
+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ....++..|+|||++.
T Consensus 103 ~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 181 (267)
T cd06645 103 LSESQIAYVSRETLQGLYYLHSKG-KMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVE 181 (267)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccccCcccccChhhhccc
Confidence 467788999999999999999999 999999999999999999999999987654322 2346789999999974
Q ss_pred -CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhh-hccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 75 -TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 75 -~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.+.++.++|+|||||++|+|++|..|+............ ......+... .....+..+.+++.+||+.+|++||++
T Consensus 182 ~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~R~~~ 259 (267)
T cd06645 182 RKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLK--DKMKWSNSFHHFVKMALTKNPKKRPTA 259 (267)
T ss_pred cCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCccc--ccCCCCHHHHHHHHHHccCCchhCcCH
Confidence 355788999999999999999999887543221111110 1111111111 112345679999999999999999999
Q ss_pred HHHHH
Q 019495 153 KSLVT 157 (340)
Q Consensus 153 ~~i~~ 157 (340)
.+|++
T Consensus 260 ~~ll~ 264 (267)
T cd06645 260 EKLLQ 264 (267)
T ss_pred HHHhc
Confidence 99875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-26 Score=201.19 Aligned_cols=151 Identities=17% Similarity=0.233 Sum_probs=118.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-------CccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-------KSYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~y~aPE~~ 73 (340)
+++..+..++.||+.||.|||+.+ ++||||+|+||+++.++.++|+|||+++..... ....++..|+|||++
T Consensus 103 l~~~~~~~~~~qi~~~l~~LH~~~-i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 181 (266)
T cd06651 103 LTESVTRKYTRQILEGMSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVI 181 (266)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHh
Confidence 467788899999999999999999 999999999999999999999999998754321 123467899999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
.+..++.++|+|||||++|+|++|+.||.............. ......++...+..+..++ +||..+|++||++.
T Consensus 182 ~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~ 256 (266)
T cd06651 182 SGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIAT----QPTNPQLPSHISEHARDFL-GCIFVEARHRPSAE 256 (266)
T ss_pred CCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhc----CCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHH
Confidence 888889999999999999999999988864322211111111 1112234444567788888 68889999999999
Q ss_pred HHHH
Q 019495 154 SLVT 157 (340)
Q Consensus 154 ~i~~ 157 (340)
+|+.
T Consensus 257 eil~ 260 (266)
T cd06651 257 ELLR 260 (266)
T ss_pred HHhc
Confidence 9974
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.6e-27 Score=204.40 Aligned_cols=149 Identities=20% Similarity=0.283 Sum_probs=122.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc---cccCCcccCcccccCCCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS---YSTNLAFTPPEYLRTGRV 78 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~---~~~~~~y~aPE~~~~~~~ 78 (340)
+++..+-++.+|+.||++||... ||+||+||+|||+|+.|+++|+|+|++..+..+.. ..||.+|||||++..+.|
T Consensus 285 ~e~ra~FYAAEi~cGLehlH~~~-iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y 363 (591)
T KOG0986|consen 285 DEQRARFYAAEIICGLEHLHRRR-IVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVY 363 (591)
T ss_pred chHHHHHHHHHHHhhHHHHHhcc-eeeccCChhheeeccCCCeEeeccceEEecCCCCccccccCcccccCHHHHcCCcc
Confidence 56677788999999999999999 99999999999999999999999999998877653 378999999999999999
Q ss_pred CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 79 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 79 ~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+...|.||+||++|||+.|+.||...... .+...+....- ....+++...+++..++.+..|..||.+|...+
T Consensus 364 ~~s~Dwf~lGCllYemi~G~sPFr~~KeK-vk~eEvdrr~~-~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 364 DFSPDWFSLGCLLYEMIAGHSPFRQRKEK-VKREEVDRRTL-EDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred cCCccHHHHHhHHHHHHcccCchhhhhhh-hhHHHHHHHHh-cchhhcccccCHHHHHHHHHHHccCHHHhccCC
Confidence 99999999999999999999999754221 11111111110 113356777889999999999999999996654
|
|
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-26 Score=198.41 Aligned_cols=154 Identities=19% Similarity=0.311 Sum_probs=120.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
+++.....++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||.+....... ...++..|++||++.+
T Consensus 97 ~~~~~~~~~~~~l~~~l~~lH~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~ 175 (256)
T cd05112 97 FSQETLLGMCLDVCEGMAYLESSN-VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSF 175 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhcc
Confidence 467788999999999999999999 9999999999999999999999999887543321 1223568999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+.++.++|+||||+++|||++ |..||............... .....+...+..+.+++.+||+.+|++||++.+
T Consensus 176 ~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~ 250 (256)
T cd05112 176 SKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAG-----FRLYKPRLASQSVYELMQHCWKERPEDRPSFSL 250 (256)
T ss_pred CCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCC-----CCCCCCCCCCHHHHHHHHHHcccChhhCCCHHH
Confidence 888999999999999999998 88777544332222111111 111122334578999999999999999999999
Q ss_pred HHHHhc
Q 019495 155 LVTALS 160 (340)
Q Consensus 155 i~~~L~ 160 (340)
+++.|.
T Consensus 251 ~l~~l~ 256 (256)
T cd05112 251 LLHQLA 256 (256)
T ss_pred HHHhhC
Confidence 998763
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-26 Score=199.97 Aligned_cols=155 Identities=25% Similarity=0.369 Sum_probs=120.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC--------ccccCCcccCccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--------SYSTNLAFTPPEY 72 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~--------~~~~~~~y~aPE~ 72 (340)
+++.....++.|++.||.|||+.+ ++||||+|+||++++++.++++|||++....... ...++..|++||+
T Consensus 99 ~~~~~~~~~~~ql~~al~~lh~~~-i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~ 177 (267)
T cd06610 99 LDEAIIATVLKEVLKGLEYLHSNG-QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEV 177 (267)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHH
Confidence 467788899999999999999999 9999999999999999999999999876544322 2357888999999
Q ss_pred ccCC-CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCC-CchhHHHHHHHHHHhhccCCCCCC
Q 019495 73 LRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF-TDDDGTELVRLASRCLQYEPRERP 150 (340)
Q Consensus 73 ~~~~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~~p~~Rp 150 (340)
+... .++.++|+||||+++++|++|..||................ ++...... ....+..+.+++.+||..||++||
T Consensus 178 ~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 256 (267)
T cd06610 178 MEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQND-PPSLETGADYKKYSKSFRKMISLCLQKDPSKRP 256 (267)
T ss_pred HccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCC-CCCcCCccccccccHHHHHHHHHHcCCChhhCc
Confidence 8876 68899999999999999999999886543322211111111 11111111 124568899999999999999999
Q ss_pred CHHHHHH
Q 019495 151 NPKSLVT 157 (340)
Q Consensus 151 s~~~i~~ 157 (340)
++.+++.
T Consensus 257 ~~~~ll~ 263 (267)
T cd06610 257 TAEELLK 263 (267)
T ss_pred CHHHHhh
Confidence 9999875
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=203.92 Aligned_cols=156 Identities=18% Similarity=0.230 Sum_probs=116.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ ++||||||+||+++.++.++|+|||+++...... ...++..|+|||++.+.
T Consensus 96 ~~~~~~~~~~~qi~~al~~LH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 174 (284)
T cd07839 96 IDPEIVKSFMFQLLKGLAFCHSHN-VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 174 (284)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCCccccCCcChHHHhCC
Confidence 467888999999999999999999 9999999999999999999999999987544322 23457889999998764
Q ss_pred C-CCCCcceehHHHHHHHHhhCCCCCCcchh-HHHhhhh--------------hccccccccC---------CCCCchhH
Q 019495 77 R-VTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRN--------------LQMLTDSCLE---------GQFTDDDG 131 (340)
Q Consensus 77 ~-~~~~~Di~s~G~il~el~~g~~~~~~~~~-~~~~~~~--------------~~~~~~~~~~---------~~~~~~~~ 131 (340)
. ++.++|||||||++|+|+||+.|+..... ....... .....+.... .......+
T Consensus 175 ~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (284)
T cd07839 175 KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLN 254 (284)
T ss_pred cccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCC
Confidence 4 68899999999999999999887533211 1100000 0000000000 01112346
Q ss_pred HHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 132 TELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 132 ~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
..+.+++.+||+.||.+|||+.+++.
T Consensus 255 ~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 255 STGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred HHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 78899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-26 Score=197.91 Aligned_cols=153 Identities=25% Similarity=0.400 Sum_probs=121.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc-----cccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-----YSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~y~aPE~~~~ 75 (340)
+++.+...++.|++.||.|||+.+ ++||||||+||+++.++.++++|||++........ ..++..|++||.+.+
T Consensus 100 ~~~~~~~~~~~ql~~~l~~lh~~~-~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~ 178 (258)
T smart00219 100 LSLSDLLSFALQIARGMEYLESKN-FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKD 178 (258)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCC-eeecccccceEEEccCCeEEEcccCCceecccccccccccCCCcccccChHHhcc
Confidence 467889999999999999999999 99999999999999999999999999876554321 124678999999987
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
..++.++|+||+|+++++|++ |..|+............... .....+...+.++.+++.+||+.+|++|||+.+
T Consensus 179 ~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ 253 (258)
T smart00219 179 GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKG-----YRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSE 253 (258)
T ss_pred CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-----CCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHH
Confidence 889999999999999999998 66666543222221111111 112233446788999999999999999999999
Q ss_pred HHHHh
Q 019495 155 LVTAL 159 (340)
Q Consensus 155 i~~~L 159 (340)
+++.|
T Consensus 254 ll~~l 258 (258)
T smart00219 254 LVEIL 258 (258)
T ss_pred HHhhC
Confidence 98754
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.2e-26 Score=201.86 Aligned_cols=153 Identities=17% Similarity=0.198 Sum_probs=118.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccC-
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRT- 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~- 75 (340)
+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....+++.|++||++.+
T Consensus 107 l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 185 (292)
T cd06644 107 LTEPQIQVICRQMLEALQYLHSMK-IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCE 185 (292)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCC-eeecCCCcceEEEcCCCCEEEccCccceeccccccccceecCCccccCceeeccc
Confidence 467888999999999999999999 999999999999999999999999987653322 23456789999999853
Q ss_pred ----CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 76 ----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 76 ----~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
..++.++|+|||||++|+|++|..||............... .. .....+...+..+.+++.+||+.+|++||+
T Consensus 186 ~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~ 262 (292)
T cd06644 186 TMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS-EP--PTLSQPSKWSMEFRDFLKTALDKHPETRPS 262 (292)
T ss_pred cccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcC-CC--ccCCCCcccCHHHHHHHHHHhcCCcccCcC
Confidence 34678999999999999999999887553322111111111 01 111223445678999999999999999999
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.++++
T Consensus 263 ~~~il~ 268 (292)
T cd06644 263 AAQLLE 268 (292)
T ss_pred HHHHhc
Confidence 999975
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=210.27 Aligned_cols=157 Identities=23% Similarity=0.336 Sum_probs=131.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCcccc-----CCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST-----NLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~-----~~~y~aPE~~~~ 75 (340)
|+..+-+.+++||+.+|.|||++. +|||||...|||+.....||++|||+++...+...+.. ..-|||||-+..
T Consensus 488 L~l~tL~ly~~Qi~talaYLeSkr-fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINf 566 (974)
T KOG4257|consen 488 LPLRTLTLYCYQICTALAYLESKR-FVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINF 566 (974)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhc-hhhhhhhhhheeecCcceeeecccchhhhccccchhhccccccceeecCccccch
Confidence 455677889999999999999998 99999999999999999999999999999887754432 346999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
..++.+||||-|||.+||++. |..||.+- ++..+-......-+.+.|+.|++.+..++.+||..+|.+||.+.+
T Consensus 567 RrFTtASDVWMFgVCmWEIl~lGvkPfqgv-----kNsDVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrfte 641 (974)
T KOG4257|consen 567 RRFTTASDVWMFGVCMWEILSLGVKPFQGV-----KNSDVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTE 641 (974)
T ss_pred hcccchhhHHHHHHHHHHHHHhcCCccccc-----cccceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHH
Confidence 899999999999999999875 77777652 333333444444556678899999999999999999999999999
Q ss_pred HHHHhcccc
Q 019495 155 LVTALSPLQ 163 (340)
Q Consensus 155 i~~~L~~~~ 163 (340)
|...|+.+.
T Consensus 642 i~~~lsdv~ 650 (974)
T KOG4257|consen 642 IKAILSDVL 650 (974)
T ss_pred HHHHHHHHH
Confidence 988776443
|
|
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-26 Score=211.16 Aligned_cols=152 Identities=20% Similarity=0.208 Sum_probs=114.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC------------------------
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------------------------ 57 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~------------------------ 57 (340)
++.....++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||++.....
T Consensus 99 ~e~~~~~~~~qi~~al~~lH~~~-ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (382)
T cd05625 99 PEDLARFYIAELTCAVESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEW 177 (382)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccc
Confidence 45667788999999999999999 99999999999999999999999998642110
Q ss_pred ---------------------------CCccccCCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHh
Q 019495 58 ---------------------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR 110 (340)
Q Consensus 58 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~ 110 (340)
..+..||+.|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~ 257 (382)
T cd05625 178 GDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQ 257 (382)
T ss_pred cccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHH
Confidence 01235789999999999888999999999999999999999998765332222
Q ss_pred hhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC---HHHHHH
Q 019495 111 DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN---PKSLVT 157 (340)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps---~~~i~~ 157 (340)
....... ...........++.+.+++.+|+ .+|.+|++ +.+++.
T Consensus 258 ~~i~~~~--~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 304 (382)
T cd05625 258 MKVINWQ--TSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA 304 (382)
T ss_pred HHHHccC--CCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence 1111110 01111112234678888888876 59999987 777764
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.3e-26 Score=201.67 Aligned_cols=153 Identities=14% Similarity=0.155 Sum_probs=117.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....++..|++||++...
T Consensus 125 ~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 203 (291)
T cd06639 125 LDEAMISYILYGALLGLQHLHNNR-IIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACE 203 (291)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCCCCEEEeecccchhcccccccccCccCCccccChhhhcCC
Confidence 467788899999999999999999 999999999999999999999999998764432 234567889999998643
Q ss_pred -----CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 77 -----RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 77 -----~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
.++.++|+|||||++|+|++|+.|+............... ..+ ....+...+..+.+++.+||+.+|++||+
T Consensus 204 ~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps 280 (291)
T cd06639 204 QQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRN-PPP--TLLHPEKWCRSFNHFISQCLIKDFEARPS 280 (291)
T ss_pred CCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcC-CCC--CCCcccccCHHHHHHHHHHhhcChhhCcC
Confidence 2688999999999999999999888654321111111111 000 11123334567999999999999999999
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.+++.
T Consensus 281 ~~~il~ 286 (291)
T cd06639 281 VTHLLE 286 (291)
T ss_pred HHHHhc
Confidence 999985
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.7e-26 Score=197.53 Aligned_cols=152 Identities=20% Similarity=0.281 Sum_probs=122.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~ 76 (340)
+++.++..++.|++.||.|||+.+ ++||||+|+||+++.++.+|++|||++....... ...+++.|+|||++.+.
T Consensus 98 ~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~ 176 (256)
T cd08221 98 FEEEMVLWYLFQIVSAVSYIHKAG-ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGV 176 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChHhEEEeCCCCEEECcCcceEEcccccccccccCCCccccCHhhcCCC
Confidence 467788999999999999999999 9999999999999999999999999887654332 34578899999999887
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++|+||||+++++|++|..||............... . ....+..++..+.+++.+||..+|++||++.+++
T Consensus 177 ~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll 251 (256)
T cd08221 177 KYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQG----N-YTPVVSVYSSELISLVHSLLQQDPEKRPTADEVL 251 (256)
T ss_pred CCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC----C-CCCCccccCHHHHHHHHHHcccCcccCCCHHHHh
Confidence 7889999999999999999999888654333222222111 1 1112344567899999999999999999999998
Q ss_pred HH
Q 019495 157 TA 158 (340)
Q Consensus 157 ~~ 158 (340)
..
T Consensus 252 ~~ 253 (256)
T cd08221 252 DQ 253 (256)
T ss_pred hC
Confidence 63
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-26 Score=201.17 Aligned_cols=152 Identities=20% Similarity=0.359 Sum_probs=117.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhC-CCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC---ccccCCcccCcccccC-
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRT- 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~-~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~- 75 (340)
+++.+...++.||+.||.|||++ + ++||||||+||+++.++.+||+|||++....... ...++..|++||++.+
T Consensus 100 ~~~~~~~~~~~qi~~~l~~lH~~~~-i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 178 (283)
T cd06617 100 IPEDILGKIAVSIVKALEYLHSKLS-VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPE 178 (283)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecccccccccccccccccCCccccChhhcCCc
Confidence 46788899999999999999997 7 9999999999999999999999999987654332 2357889999999865
Q ss_pred ---CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCC-CchhHHHHHHHHHHhhccCCCCCCC
Q 019495 76 ---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF-TDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 76 ---~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
..++.++|+||||+++|+|++|+.||........ ......... ...+ ...++..+.+++.+||..+|++||+
T Consensus 179 ~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~ 254 (283)
T cd06617 179 LNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQ---QLKQVVEEP-SPQLPAEKFSPEFQDFVNKCLKKNYKERPN 254 (283)
T ss_pred ccccccCccccchhhHHHHHHHHhCCCCCCccccCHH---HHHHHHhcC-CCCCCccccCHHHHHHHHHHccCChhhCcC
Confidence 3468899999999999999999988854211110 001111110 1111 1234678999999999999999999
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.+++.
T Consensus 255 ~~~il~ 260 (283)
T cd06617 255 YPELLQ 260 (283)
T ss_pred HHHHhc
Confidence 999975
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-26 Score=211.98 Aligned_cols=152 Identities=20% Similarity=0.209 Sum_probs=115.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCC-------------------------
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR------------------------- 56 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~------------------------- 56 (340)
++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||++....
T Consensus 99 ~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (376)
T cd05598 99 EEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEW 177 (376)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccc
Confidence 45667778999999999999999 9999999999999999999999999864211
Q ss_pred ----------------------CCCccccCCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhh
Q 019495 57 ----------------------DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL 114 (340)
Q Consensus 57 ----------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~ 114 (340)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.............
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~ 257 (376)
T cd05598 178 SEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVI 257 (376)
T ss_pred cccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHh
Confidence 0012468899999999998889999999999999999999999987654332211111
Q ss_pred ccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC---CHHHHHH
Q 019495 115 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP---NPKSLVT 157 (340)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp---s~~~i~~ 157 (340)
... ...........+..+.+++.+|+ .+|.+|+ ++.+++.
T Consensus 258 ~~~--~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 258 NWE--TTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred ccC--ccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 110 01111112245678899999876 5999999 8888875
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.1e-26 Score=210.01 Aligned_cols=150 Identities=18% Similarity=0.174 Sum_probs=114.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-----------------------
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----------------------- 58 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----------------------- 58 (340)
++.....++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 99 ~~~~~~~~~~ql~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (377)
T cd05629 99 SEDVTRFYMAECVLAIEAVHKLG-FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRN 177 (377)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEEeeccccccccccccccccccccccccccccccccc
Confidence 45667788999999999999999 999999999999999999999999988532110
Q ss_pred ----------------------------CccccCCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHh
Q 019495 59 ----------------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR 110 (340)
Q Consensus 59 ----------------------------~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~ 110 (340)
.+..||+.|+|||++.+..++.++|||||||++|||++|..||.........
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~ 257 (377)
T cd05629 178 SVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETY 257 (377)
T ss_pred ccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHH
Confidence 0235889999999998888999999999999999999999998654332221
Q ss_pred hhhhccccccccCCCCC--chhHHHHHHHHHHhhccCCCCC---CCHHHHHH
Q 019495 111 DRNLQMLTDSCLEGQFT--DDDGTELVRLASRCLQYEPRER---PNPKSLVT 157 (340)
Q Consensus 111 ~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~~p~~R---ps~~~i~~ 157 (340)
....... . ...++ ...+..+.+++.+|+. +|.+| +++.+++.
T Consensus 258 ~~i~~~~--~--~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~ 304 (377)
T cd05629 258 RKIINWR--E--TLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKS 304 (377)
T ss_pred HHHHccC--C--ccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhc
Confidence 1111100 0 01112 1345789999999997 77765 58888875
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-26 Score=202.21 Aligned_cols=153 Identities=21% Similarity=0.269 Sum_probs=120.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--CccccCCcccCcccccC-CC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRT-GR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~-~~ 77 (340)
+++.....++.|++.||.|||+++ ++||||||+||+++.++.++++|||++...... ....++..|+|||.+.+ ..
T Consensus 94 l~~~~~~~i~~qi~~al~~lH~~~-ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 172 (279)
T cd05633 94 FSEKEMRFYATEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTA 172 (279)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCCcCccCHHHhcCCCC
Confidence 478889999999999999999999 999999999999999999999999998654332 23467899999999864 45
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC-----CH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP-----NP 152 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s~ 152 (340)
++.++|+|||||++|+|++|..||.......... ..... .......+...+..+.+++.+||+.||.+|| ++
T Consensus 173 ~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 249 (279)
T cd05633 173 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--IDRMT-LTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGA 249 (279)
T ss_pred CCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH--HHHHh-hcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCH
Confidence 7899999999999999999999886432111100 01000 0112234455678899999999999999999 58
Q ss_pred HHHHH
Q 019495 153 KSLVT 157 (340)
Q Consensus 153 ~~i~~ 157 (340)
.++++
T Consensus 250 ~~~~~ 254 (279)
T cd05633 250 QEVKE 254 (279)
T ss_pred HHHHh
Confidence 88876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.7e-26 Score=200.17 Aligned_cols=153 Identities=22% Similarity=0.291 Sum_probs=120.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--CccccCCcccCcccccCC-C
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTG-R 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~-~ 77 (340)
++|..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....++..|++||++.++ .
T Consensus 94 l~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 172 (278)
T cd05606 94 FSEAEMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVA 172 (278)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCCcCCcCcHHhcCCCC
Confidence 578899999999999999999999 999999999999999999999999998754322 245678999999999754 5
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC-----CH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP-----NP 152 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s~ 152 (340)
++.++|+||+|+++|+|++|+.||.......... ..... .......+...+..+.+++.+|+..+|.+|| ++
T Consensus 173 ~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~--~~~~~-~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~ 249 (278)
T cd05606 173 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--IDRMT-LTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGA 249 (278)
T ss_pred CCcccchHhHHHHHHHHHhCCCCCCCCCccchHH--HHHHh-hccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCH
Confidence 8899999999999999999999886542111100 00000 0112234445568899999999999999999 88
Q ss_pred HHHHH
Q 019495 153 KSLVT 157 (340)
Q Consensus 153 ~~i~~ 157 (340)
.++++
T Consensus 250 ~~ll~ 254 (278)
T cd05606 250 QEVKE 254 (278)
T ss_pred HHHHh
Confidence 88874
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.4e-26 Score=201.09 Aligned_cols=153 Identities=21% Similarity=0.282 Sum_probs=120.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++++|||++...... ....++..|++||++.+.
T Consensus 112 ~~~~~~~~~~~ql~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 190 (285)
T cd06648 112 MNEEQIATVCLAVLKALSFLHAQG-VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRL 190 (285)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCccccCHHHhcCC
Confidence 467788899999999999999999 999999999999999999999999987654332 224578899999999888
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++|+||||+++|+|++|..||............... ..+.. ..+..++..+.+++.+||+.+|++||++.+++
T Consensus 191 ~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il 267 (285)
T cd06648 191 PYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN-LPPKL--KNLHKVSPRLRSFLDRMLVRDPAQRATAAELL 267 (285)
T ss_pred CCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc-CCCCC--cccccCCHHHHHHHHHHcccChhhCcCHHHHc
Confidence 8899999999999999999999987654322111111111 11111 11223567899999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 268 ~ 268 (285)
T cd06648 268 N 268 (285)
T ss_pred c
Confidence 5
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.2e-26 Score=200.29 Aligned_cols=151 Identities=18% Similarity=0.327 Sum_probs=121.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~ 76 (340)
+++..+..++.||+.||.|||+++ ++|+||+|+||+++.++.++++|||++....... ...++..|++||++.+.
T Consensus 98 ~~~~~~~~~~~~i~~~l~~lH~~~-ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 176 (277)
T cd06642 98 LEETYIATILREILKGLDYLHSER-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS 176 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCC-eeccCCChheEEEeCCCCEEEccccccccccCcchhhhcccCcccccCHHHhCcC
Confidence 467788899999999999999999 9999999999999999999999999987654332 23467889999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++|+||||++++||++|+.|+.......... . .........+..++..+.+++.+||+.+|++||++.+++
T Consensus 177 ~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 251 (277)
T cd06642 177 AYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF----L-IPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELL 251 (277)
T ss_pred CCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh----h-hhcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHH
Confidence 88999999999999999999998875432221111 1 111112223344567899999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 252 ~ 252 (277)
T cd06642 252 K 252 (277)
T ss_pred H
Confidence 6
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.1e-26 Score=202.02 Aligned_cols=152 Identities=19% Similarity=0.203 Sum_probs=121.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCccccCCcccCccccc---CCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLR---TGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~---~~~ 77 (340)
+++.+...++.|++.||.|||+.+ ++||||+|+||+++.++.++++|||++..........++..|+|||++. .+.
T Consensus 112 l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 190 (308)
T cd06634 112 LQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQ 190 (308)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHhEEECCCCcEEECCcccceeecCcccccCCccccCHHHHhhcccCC
Confidence 456788899999999999999999 9999999999999999999999999988766666667889999999975 245
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
++.++|||||||++|+|++|..|+............... ..........+..+.++|.+||+.+|++||++.+++.
T Consensus 191 ~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~ 266 (308)
T cd06634 191 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266 (308)
T ss_pred CCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhc----CCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhh
Confidence 788999999999999999999887653222111111111 1111112345678999999999999999999999985
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.6e-26 Score=197.07 Aligned_cols=151 Identities=18% Similarity=0.274 Sum_probs=122.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~ 76 (340)
+++.+++.++.|++.||.|||+++ ++|+||+|+||+++.++.++++|||++....... ...+++.|+|||++.++
T Consensus 98 ~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~ 176 (256)
T cd08218 98 FPEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENR 176 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhhccCCccccCHHHhCCC
Confidence 367788999999999999999999 9999999999999999999999999887554332 23567889999999888
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
..+.++|+||||+++++|++|+.|+................ ....+...+..+.+++.+||+.+|++||++.+|+
T Consensus 177 ~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl 251 (256)
T cd08218 177 PYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGS-----YPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSIL 251 (256)
T ss_pred CCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCC-----CCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHh
Confidence 88999999999999999999998886543332222222111 1123445568899999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 252 ~ 252 (256)
T cd08218 252 E 252 (256)
T ss_pred h
Confidence 5
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.93 E-value=4e-26 Score=205.34 Aligned_cols=156 Identities=21% Similarity=0.247 Sum_probs=114.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-----------CccccCCcccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----------KSYSTNLAFTP 69 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-----------~~~~~~~~y~a 69 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.++++||+........ ....++..|+|
T Consensus 98 l~~~~~~~i~~qi~~~L~~LH~~~-iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~a 176 (327)
T cd08227 98 MSELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLS 176 (327)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccC
Confidence 467888999999999999999999 999999999999999999999999864332111 11235677999
Q ss_pred cccccC--CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccc-----------------------c----
Q 019495 70 PEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD-----------------------S---- 120 (340)
Q Consensus 70 PE~~~~--~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~-----------------------~---- 120 (340)
||++.+ ..++.++|||||||++|||++|+.||.................+ .
T Consensus 177 PE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (327)
T cd08227 177 PEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGE 256 (327)
T ss_pred hHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCc
Confidence 999975 35889999999999999999999988643221111010000000 0
Q ss_pred -------------ccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 121 -------------CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 121 -------------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
..........++.+.+++.+||+.||++|||+.++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 257 STTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred ccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 0000111234578999999999999999999999985
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-26 Score=191.45 Aligned_cols=155 Identities=17% Similarity=0.186 Sum_probs=122.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC---CCCeEEeccCCCccCCCC---CccccCCcccCcccccC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~---~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~ 75 (340)
++++.-.|+.||+.|+.|||+.+ |.||||||+|+|... +..+||+|||+++..... .+-+-|+.|.|||++..
T Consensus 159 TErea~eI~~qI~~Av~~lH~~n-IAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~ 237 (400)
T KOG0604|consen 159 TEREASEIMKQIGLAVRYLHSMN-IAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGP 237 (400)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcc-hhhccCChhheeeecCCCCcceEecccccccccCCCccccCCcccccccCHHHhCc
Confidence 46778899999999999999999 999999999999964 445899999999976533 23456899999999998
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccc--ccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS--CLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
.+|+..+|+||+||++|-|++|-+||.+.....+..+....+... .++.+-....+....++|+.+|..+|.+|.++.
T Consensus 238 eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~ 317 (400)
T KOG0604|consen 238 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIE 317 (400)
T ss_pred hhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHH
Confidence 899999999999999999999999997643322222222222211 122222344688999999999999999999999
Q ss_pred HHHH
Q 019495 154 SLVT 157 (340)
Q Consensus 154 ~i~~ 157 (340)
++++
T Consensus 318 ~~m~ 321 (400)
T KOG0604|consen 318 EVMD 321 (400)
T ss_pred Hhhc
Confidence 9885
|
|
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.9e-26 Score=202.64 Aligned_cols=153 Identities=23% Similarity=0.283 Sum_probs=120.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....++..|+|||++.+.
T Consensus 114 ~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 192 (297)
T cd06659 114 LNEEQIATVCESVLQALCYLHSQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRT 192 (297)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCccccCHHHHccC
Confidence 467788999999999999999999 999999999999999999999999987654322 234578899999999888
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++|+||||+++|||++|..||.......... ....... .........+..+.+++.+||+.+|++||++.+++
T Consensus 193 ~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll 269 (297)
T cd06659 193 PYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK-RLRDSPP--PKLKNAHKISPVLRDFLERMLTREPQERATAQELL 269 (297)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHhccCC--CCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHh
Confidence 89999999999999999999998876432211111 1111111 11112234457899999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 270 ~ 270 (297)
T cd06659 270 D 270 (297)
T ss_pred h
Confidence 6
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.1e-26 Score=199.77 Aligned_cols=154 Identities=19% Similarity=0.346 Sum_probs=120.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhC-CCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~-~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.....++.||+.||.|||++ + ++||||||+||+++.++.++|+|||++...... ....++..|++||++.+..
T Consensus 99 ~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 177 (286)
T cd06622 99 IPEDVLRRITYAVVKGLKFLKEEHN-IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGG 177 (286)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCC-EeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccCCCccCccCcchhcCCC
Confidence 46788899999999999999975 7 999999999999999999999999998754332 2345678999999986543
Q ss_pred ------CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 78 ------VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 78 ------~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
++.++|+|||||++|+|++|..||.......... ....... ......+..++..+.+++.+||+.+|++||+
T Consensus 178 ~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~ 255 (286)
T cd06622 178 PNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFA-QLSAIVD-GDPPTLPSGYSDDAQDFVAKCLNKIPNRRPT 255 (286)
T ss_pred CCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHH-HHHHHhh-cCCCCCCcccCHHHHHHHHHHcccCcccCCC
Confidence 4789999999999999999999886543322111 1111111 1122345557789999999999999999999
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.+++.
T Consensus 256 ~~~l~~ 261 (286)
T cd06622 256 YAQLLE 261 (286)
T ss_pred HHHHhc
Confidence 999985
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-26 Score=201.82 Aligned_cols=153 Identities=27% Similarity=0.415 Sum_probs=119.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCC----CCCccccCCcccCccccc-C
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----DGKSYSTNLAFTPPEYLR-T 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~----~~~~~~~~~~y~aPE~~~-~ 75 (340)
+++.++..++.||++||.|||+++ ++|+||||+||+++.++.++|+|||.+.... ......++..|+|||++. +
T Consensus 95 ~~~~~~~~~~~qi~~~L~~Lh~~~-i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 173 (260)
T PF00069_consen 95 LSEEEILKIAYQILEALAYLHSKG-IVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQG 173 (260)
T ss_dssp BBHHHHHHHHHHHHHHHHHHHHTT-EEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTT
T ss_pred cccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 367789999999999999999999 9999999999999999999999999987421 122346788999999998 7
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchh---HHHhhhhhc-cccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL---DLIRDRNLQ-MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
...+.++|+||+|+++++|++|..|+..... ......... .... ...........+.+++.+||+.||++||+
T Consensus 174 ~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~~p~~R~~ 250 (260)
T PF00069_consen 174 KKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPS---SSQQSREKSEELRDLIKKMLSKDPEQRPS 250 (260)
T ss_dssp SSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHH---HTTSHTTSHHHHHHHHHHHSSSSGGGSTT
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhhcccccccc---cccccchhHHHHHHHHHHHccCChhHCcC
Confidence 7889999999999999999999988876511 111111111 1111 11111122378999999999999999999
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.++++
T Consensus 251 ~~~l~~ 256 (260)
T PF00069_consen 251 AEELLK 256 (260)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 999874
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.7e-26 Score=198.00 Aligned_cols=155 Identities=20% Similarity=0.329 Sum_probs=120.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-----CccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~ 75 (340)
+++..+..++.||+.||.|||+++ ++||||||+||+++.++.++++|||++...... ....++..|++||.+.+
T Consensus 114 l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~ 192 (275)
T cd05046 114 LSTKQKVALCTQIALGMDHLSNAR-FVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQE 192 (275)
T ss_pred CCHHHHHHHHHHHHHHHHHhhhcC-cccCcCccceEEEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhcc
Confidence 468889999999999999999999 999999999999999999999999987643322 12234667999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+..+.++||||||+++|++++ |..||............ .........+..++..+.+++.+||+.+|.+||++.+
T Consensus 193 ~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ 268 (275)
T cd05046 193 DDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRL----QAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSE 268 (275)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHH----HcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHH
Confidence 888899999999999999999 66666433222211111 1111112234456688999999999999999999999
Q ss_pred HHHHhc
Q 019495 155 LVTALS 160 (340)
Q Consensus 155 i~~~L~ 160 (340)
++..|.
T Consensus 269 ~l~~l~ 274 (275)
T cd05046 269 LVSALG 274 (275)
T ss_pred HHHHhc
Confidence 998775
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.1e-26 Score=185.38 Aligned_cols=148 Identities=22% Similarity=0.292 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC--CCccccCCcccCcccccCCCCCC
Q 019495 3 WAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYSTNLAFTPPEYLRTGRVTP 80 (340)
Q Consensus 3 ~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~ 80 (340)
....-.++.|++.||.|+|.++ ||||||||+|+|++..|.+|++|||-+..... ..+.+||.-|.+||+..+...+.
T Consensus 123 e~~~a~Yi~q~A~Al~y~h~k~-VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~ 201 (281)
T KOG0580|consen 123 EQRAATYIKQLANALLYCHLKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDK 201 (281)
T ss_pred ccchhHHHHHHHHHHHHhccCC-cccCCCCHHHhccCCCCCeeccCCCceeecCCCCceeeecccccCCHhhcCCCCccc
Confidence 3445578999999999999999 99999999999999999999999998776543 35678999999999999988999
Q ss_pred CcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 81 ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 81 ~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
..|+|++|+++||++.|.+||............... ...+|..++....++|.+|+..+|.+|.+..++++
T Consensus 202 ~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~------~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 202 FVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKV------DLKFPSTISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred hhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHc------cccCCcccChhHHHHHHHHhccCccccccHHHHhh
Confidence 999999999999999999999776543332222111 22456677789999999999999999999999875
|
|
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.4e-26 Score=200.38 Aligned_cols=156 Identities=19% Similarity=0.306 Sum_probs=118.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccC-
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRT- 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~- 75 (340)
++|.++..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++....... ...++..|++||++.+
T Consensus 97 ~~~~~~~~~~~ql~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~ 175 (286)
T cd07847 97 VPEHLIKKIIWQTLQAVNFCHKHN-CIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGD 175 (286)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ceecCCChhhEEEcCCCcEEECccccceecCCCcccccCcccccccCCHHHHhCC
Confidence 468889999999999999999999 9999999999999999999999999987654432 3456788999999876
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhh---hccc-----------------cccccCCC-----CCchh
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN---LQML-----------------TDSCLEGQ-----FTDDD 130 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~---~~~~-----------------~~~~~~~~-----~~~~~ 130 (340)
..++.++|+||||+++|+|++|..||............ ...+ ..+..... .....
T Consensus 176 ~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (286)
T cd07847 176 TQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNI 255 (286)
T ss_pred CCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccC
Confidence 45788999999999999999999888653221110000 0000 00000000 01123
Q ss_pred HHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 131 GTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 131 ~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+..+.+++.+||+.+|++||++.+++.
T Consensus 256 ~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 256 SSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred CHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 577899999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.8e-26 Score=204.68 Aligned_cols=155 Identities=16% Similarity=0.193 Sum_probs=116.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-----CccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~ 75 (340)
+++.....++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++...... ....||+.|+|||++.+
T Consensus 99 l~~~~~~~~~~qi~~al~~lH~~~-iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 177 (332)
T cd05623 99 LPEDMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQA 177 (332)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEeecchheecccCCcceecccccCccccCHHHHhc
Confidence 456778889999999999999999 999999999999999999999999998654322 12468999999999862
Q ss_pred -----CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCC--
Q 019495 76 -----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRE-- 148 (340)
Q Consensus 76 -----~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~-- 148 (340)
+.++.++|||||||++|||++|+.||....................+ +.....++..+.+++.+|+..++++
T Consensus 178 ~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~-p~~~~~~s~~~~~li~~ll~~~~~r~~ 256 (332)
T cd05623 178 MEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQF-PAQVTDVSEDAKDLIRRLICSREHRLG 256 (332)
T ss_pred cccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccC-CCccccCCHHHHHHHHHHccChhhhcC
Confidence 45788999999999999999999998765433222221111100001 1112345688999999988765544
Q ss_pred CCCHHHHHH
Q 019495 149 RPNPKSLVT 157 (340)
Q Consensus 149 Rps~~~i~~ 157 (340)
|+++.+++.
T Consensus 257 r~~~~~~~~ 265 (332)
T cd05623 257 QNGIEDFKQ 265 (332)
T ss_pred CCCHHHHhC
Confidence 678888875
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.4e-26 Score=206.15 Aligned_cols=156 Identities=15% Similarity=0.233 Sum_probs=119.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC---ccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~~~ 77 (340)
+++.....++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++...... ...++..|+|||++.+..
T Consensus 115 l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 193 (353)
T cd07850 115 LDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 193 (353)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCC
Confidence 356677889999999999999999 9999999999999999999999999988654432 235688999999999888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhc---------------------------------ccccccc--
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ---------------------------------MLTDSCL-- 122 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~-- 122 (340)
++.++|||||||++|+|++|+.||.............. ...+...
T Consensus 194 ~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (353)
T cd07850 194 YKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFP 273 (353)
T ss_pred CCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccC
Confidence 99999999999999999999988864321110000000 0000000
Q ss_pred --CCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 123 --EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 123 --~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
....+...+..+.+++.+||+.||++|||+.+++.
T Consensus 274 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 274 PDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred cccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00001234567899999999999999999999985
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-25 Score=200.84 Aligned_cols=152 Identities=20% Similarity=0.233 Sum_probs=120.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCccccCCcccCccccc---CCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLR---TGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~---~~~ 77 (340)
+++.++..++.||+.||.|||+++ ++||||+|+||+++.++.++|+|||++..........++..|+|||++. .+.
T Consensus 118 l~~~~~~~~~~qi~~al~~LH~~g-i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 196 (313)
T cd06633 118 LQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTPYWMAPEVILAMDEGQ 196 (313)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccccccccChhhccccCCCC
Confidence 467888999999999999999999 9999999999999999999999999987655555667889999999984 356
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
++.++|+||||+++|+|++|..|+................ .........+..+.+++.+||+.+|.+||++.+++.
T Consensus 197 ~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 197 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND----SPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC----CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 7889999999999999999998876543221111111111 111112234467999999999999999999999984
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=6e-26 Score=198.00 Aligned_cols=151 Identities=17% Similarity=0.209 Sum_probs=118.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC-------CCccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-------GKSYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~-------~~~~~~~~~y~aPE~~ 73 (340)
+++.....++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||+++.... .....++..|+|||++
T Consensus 103 ~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 181 (265)
T cd06652 103 LTENVTRKYTRQILEGVSYLHSNM-IVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVI 181 (265)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhh
Confidence 356778899999999999999999 99999999999999999999999998875432 1234578899999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
.+..++.++|+||||+++|+|++|+.||........... .......+..+...+..+.+++.+|+. +|++||+++
T Consensus 182 ~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~ 256 (265)
T cd06652 182 SGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFK----IATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSAD 256 (265)
T ss_pred cCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHH----HhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHH
Confidence 888889999999999999999999998865322211111 111111223455566788999999994 999999999
Q ss_pred HHHH
Q 019495 154 SLVT 157 (340)
Q Consensus 154 ~i~~ 157 (340)
+|+.
T Consensus 257 ~il~ 260 (265)
T cd06652 257 ELLR 260 (265)
T ss_pred HHhc
Confidence 9874
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.6e-26 Score=201.69 Aligned_cols=156 Identities=18% Similarity=0.253 Sum_probs=119.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.+...++.||+.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....+++.|+|||.+.+.
T Consensus 103 l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~ 181 (293)
T cd07843 103 FLQSEVKCLMLQLLSGVAHLHDNW-ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGA 181 (293)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCcEEEeecCceeeccCCccccccccccccccCchhhcCC
Confidence 467889999999999999999999 999999999999999999999999988765443 123457889999998764
Q ss_pred -CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhc-------------------------cccccccCCCCCch-
Q 019495 77 -RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-------------------------MLTDSCLEGQFTDD- 129 (340)
Q Consensus 77 -~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~- 129 (340)
.++.++|+||||+++|+|++|..||.............. ......+...++..
T Consensus 182 ~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (293)
T cd07843 182 KEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALS 261 (293)
T ss_pred ccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccC
Confidence 368899999999999999999988764322111111000 00011111223322
Q ss_pred hHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 130 DGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 130 ~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.+..+.+++.+||+.+|++|||+.+++.
T Consensus 262 ~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 262 LSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred CChHHHHHHHHHhccCccccCCHHHHhc
Confidence 4678999999999999999999999974
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.5e-26 Score=197.79 Aligned_cols=151 Identities=22% Similarity=0.298 Sum_probs=123.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHH-----hCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcc
Q 019495 1 MKWAMRLRVVLHLAQALEYCT-----SKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPE 71 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH-----~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE 71 (340)
+++...+.++.||+.||.||| +.+ ++|+||+|+||+++.++.+|++|||++....... ...++..|++||
T Consensus 102 l~~~~~~~~~~~i~~~l~~lH~~~~~~~~-i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE 180 (265)
T cd08217 102 IEEEFIWRILTQLLLALYECHNRSDPGNT-VLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPE 180 (265)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCccccCc-ceecCCCHHHEEEecCCCEEEecccccccccCCcccccccccCCCccChh
Confidence 467888999999999999999 888 9999999999999999999999999987655433 345788999999
Q ss_pred cccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 72 YLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 72 ~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
++.+..++.++|+||||+++++|++|..|+.......+...... .....++...+..+.+++.+|++.+|++||+
T Consensus 181 ~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~ 255 (265)
T cd08217 181 QLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKE-----GKFRRIPYRYSSELNEVIKSMLNVDPDKRPS 255 (265)
T ss_pred hhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhc-----CCCCCCccccCHHHHHHHHHHccCCcccCCC
Confidence 99888889999999999999999999988865432222211111 1122345556788999999999999999999
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.+|++
T Consensus 256 ~~~il~ 261 (265)
T cd08217 256 TEELLQ 261 (265)
T ss_pred HHHHhh
Confidence 999985
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=197.13 Aligned_cols=156 Identities=21% Similarity=0.309 Sum_probs=119.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
+++..+..++.||+.||.|||+++ ++||||+|+||+++.++.++++|||+++..... ....++..|++||++.
T Consensus 105 l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~ 183 (272)
T cd06629 105 FEEQLVRFFTEQVLEGLAYLHSKG-ILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIH 183 (272)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCC-eeecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhc
Confidence 456778889999999999999999 999999999999999999999999998754322 1234678899999987
Q ss_pred CCC--CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 75 TGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 75 ~~~--~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
... ++.++|+||||++++++++|..|+....................+.......++..+.+++.+||..+|++||++
T Consensus 184 ~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~ 263 (272)
T cd06629 184 SYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTA 263 (272)
T ss_pred cccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCH
Confidence 654 789999999999999999999887543221111111111111111222223456889999999999999999999
Q ss_pred HHHHH
Q 019495 153 KSLVT 157 (340)
Q Consensus 153 ~~i~~ 157 (340)
.+|+.
T Consensus 264 ~~il~ 268 (272)
T cd06629 264 RELLQ 268 (272)
T ss_pred HHHhh
Confidence 99875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.9e-26 Score=198.62 Aligned_cols=151 Identities=19% Similarity=0.314 Sum_probs=121.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~ 76 (340)
+++.+...++.|++.||.|||+.+ ++|+||+|+||+++.++.++++|||++....... ...++..|+|||++.+.
T Consensus 98 l~~~~~~~~~~~l~~~l~~lh~~~-ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~ 176 (277)
T cd06640 98 FDEFQIATMLKEILKGLDYLHSEK-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQS 176 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-ccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccccCcccccCHhHhccC
Confidence 356778889999999999999999 9999999999999999999999999987654322 23467789999999888
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++|+||||+++|||++|..|+.......... ..........+..++..+.+++.+||+.+|++||++.+++
T Consensus 177 ~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 251 (277)
T cd06640 177 AYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF-----LIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELL 251 (277)
T ss_pred CCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh-----hhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHH
Confidence 88999999999999999999998876543221111 1111112234455678899999999999999999999997
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 252 ~ 252 (277)
T cd06640 252 K 252 (277)
T ss_pred h
Confidence 5
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.3e-26 Score=202.35 Aligned_cols=153 Identities=20% Similarity=0.268 Sum_probs=120.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~ 76 (340)
+++.+...++.|++.||.|||+.+ ++||||||+||+++.++.++++|||++....... ...+++.|++||.+.+.
T Consensus 112 ~~~~~~~~~~~~l~~~L~~LH~~~-i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 190 (297)
T cd06656 112 MDEGQIAAVCRECLQALDFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 190 (297)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcccCCccccCHHHHcCC
Confidence 467788999999999999999999 9999999999999999999999999887544332 23567899999999888
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++|+||||+++|++++|..||.......... ............+...+..+.+++.+||..+|++||++.+++
T Consensus 191 ~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il 267 (297)
T cd06656 191 AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY---LIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELL 267 (297)
T ss_pred CCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee---eeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 88999999999999999999998885532211100 000001111122344567789999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 268 ~ 268 (297)
T cd06656 268 Q 268 (297)
T ss_pred c
Confidence 6
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-25 Score=195.33 Aligned_cols=151 Identities=20% Similarity=0.262 Sum_probs=121.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC-CeEEeccCCCccCCCCC---ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~-~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~~ 76 (340)
+++..+..++.|++.||.|||+++ ++|+||+|+||+++.++ .++++|||++....... ...++..|+|||.+.+.
T Consensus 98 ~~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 176 (256)
T cd08220 98 LDEDTILHFFVQILLALHHVHTKL-ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGK 176 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccccccCCcccCchhccCC
Confidence 467788999999999999999999 99999999999998554 57999999987654332 34568899999999888
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++|+||||+++|+|++|..||............... ....++...+..+.+++.+||+.+|++|||+.+++
T Consensus 177 ~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll 251 (256)
T cd08220 177 PYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSG-----TFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIM 251 (256)
T ss_pred CCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhc-----CCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 8899999999999999999999888654333222222111 11223445668899999999999999999999997
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 252 ~ 252 (256)
T cd08220 252 A 252 (256)
T ss_pred h
Confidence 5
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.9e-26 Score=200.21 Aligned_cols=153 Identities=21% Similarity=0.339 Sum_probs=116.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhC-CCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC---ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~-~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~~ 76 (340)
+++..+..++.||+.||.|||+. + ++||||+|+||+++.++.+||+|||++....... ...++..|+|||++.+.
T Consensus 111 l~~~~~~~i~~~i~~~l~~lH~~~~-i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 189 (296)
T cd06618 111 IPEDILGKMTVAIVKALHYLKEKHG-VIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPP 189 (296)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhCC-EecCCCcHHHEEEcCCCCEEECccccchhccCCCcccCCCCCccccCHhhcCCC
Confidence 46788889999999999999984 7 9999999999999999999999999987654332 22467789999998754
Q ss_pred C----CCCCcceehHHHHHHHHhhCCCCCCcchhHH-HhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 77 R----VTPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 77 ~----~~~~~Di~s~G~il~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
. ++.++|+||||+++|+|++|+.||....... ......... .........++..+.+++.+||+.||++||+
T Consensus 190 ~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~ 266 (296)
T cd06618 190 DPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEE---PPSLPPNEGFSPDFCSFVDLCLTKDHRKRPK 266 (296)
T ss_pred CCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCC---CCCCCCCCCCCHHHHHHHHHHccCChhhCCC
Confidence 3 7889999999999999999999886422111 101111110 0011111235678999999999999999999
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.+++.
T Consensus 267 ~~~il~ 272 (296)
T cd06618 267 YRELLQ 272 (296)
T ss_pred HHHHhc
Confidence 999985
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=198.47 Aligned_cols=153 Identities=13% Similarity=0.163 Sum_probs=116.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccC--
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRT-- 75 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~-- 75 (340)
++.....++.|++.||.|||+.+ ++||||||+||+++.++.++++|||+++..... ....+++.|+|||++..
T Consensus 122 ~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 200 (286)
T cd06638 122 EEPIIAYILHEALMGLQHLHVNK-TIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQ 200 (286)
T ss_pred cHHHHHHHHHHHHHHHHHHHhCC-ccccCCCHHhEEECCCCCEEEccCCceeecccCCCccccccCCCcccChhhhchhh
Confidence 45667789999999999999999 999999999999999999999999998764332 23457889999999853
Q ss_pred ---CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 76 ---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 76 ---~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
..++.++|+|||||++|+|++|+.|+........... ...... .....+...+..+.+++.+||+.||++||++
T Consensus 201 ~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~ 277 (286)
T cd06638 201 QLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFK-IPRNPP--PTLHQPELWSNEFNDFIRKCLTKDYEKRPTV 277 (286)
T ss_pred hccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhh-ccccCC--CcccCCCCcCHHHHHHHHHHccCCcccCCCH
Confidence 3478899999999999999999988765322111100 001000 0111233345789999999999999999999
Q ss_pred HHHHHH
Q 019495 153 KSLVTA 158 (340)
Q Consensus 153 ~~i~~~ 158 (340)
.++++.
T Consensus 278 ~ell~~ 283 (286)
T cd06638 278 SDLLQH 283 (286)
T ss_pred HHHhhc
Confidence 999863
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.8e-26 Score=197.66 Aligned_cols=153 Identities=15% Similarity=0.182 Sum_probs=117.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccC-
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRT- 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~- 75 (340)
+++.....++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++..|+|||++..
T Consensus 110 ~~~~~~~~~~~ql~~al~~lH~~~-i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 188 (275)
T cd06608 110 LKEEWIAYILRETLRGLAYLHENK-VIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACD 188 (275)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEEccCCeEEECCCccceecccchhhhcCccccccccCHhHhccc
Confidence 356778889999999999999999 999999999999999999999999987654332 23457889999998854
Q ss_pred ----CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 76 ----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 76 ----~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
..++.++||||||+++|++++|..||................ ......+...+..+.+++.+||..||++|||
T Consensus 189 ~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt 265 (275)
T cd06608 189 EQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNP---PPTLKSPENWSKKFNDFISECLIKNYEQRPF 265 (275)
T ss_pred ccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccC---CCCCCchhhcCHHHHHHHHHHhhcChhhCcC
Confidence 246788999999999999999999886432211111111110 0011112234578999999999999999999
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.+++.
T Consensus 266 ~~~ll~ 271 (275)
T cd06608 266 MEELLE 271 (275)
T ss_pred HHHHhc
Confidence 999875
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=202.82 Aligned_cols=155 Identities=18% Similarity=0.216 Sum_probs=114.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||++....... ...||+.|+|||++..
T Consensus 99 ~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 177 (331)
T cd05597 99 LPEDMARFYLAEMVLAIDSVHQLG-YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQA 177 (331)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhh
Confidence 356678889999999999999999 9999999999999999999999999986543322 2357999999999863
Q ss_pred -----CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCC--
Q 019495 76 -----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRE-- 148 (340)
Q Consensus 76 -----~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~-- 148 (340)
+.++.++|||||||++|+|++|+.||....................+. ......+..+.+++.+|+..++++
T Consensus 178 ~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~li~~ll~~~~~r~~ 256 (331)
T cd05597 178 MEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFP-PDVTDVSEEAKDLIRRLICSPETRLG 256 (331)
T ss_pred ccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCC-CccCCCCHHHHHHHHHHccCcccccC
Confidence 357889999999999999999999987653322221111110000011 112235678999999988654433
Q ss_pred CCCHHHHHH
Q 019495 149 RPNPKSLVT 157 (340)
Q Consensus 149 Rps~~~i~~ 157 (340)
|+++.+++.
T Consensus 257 r~~~~~~l~ 265 (331)
T cd05597 257 RNGLQDFKD 265 (331)
T ss_pred CCCHHHHhc
Confidence 788888875
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=200.53 Aligned_cols=157 Identities=18% Similarity=0.172 Sum_probs=120.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-------------------Ccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-------------------KSY 61 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-------------------~~~ 61 (340)
+++.....++.|++.||.|||+.+ ++||||||+||+++.++.++++|||+++..... ...
T Consensus 98 ~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (305)
T cd05609 98 LPVDMARMYFAETVLALEYLHNYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQV 176 (305)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCC
Confidence 467788899999999999999999 999999999999999999999999987632100 112
Q ss_pred ccCCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHh
Q 019495 62 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 141 (340)
Q Consensus 62 ~~~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 141 (340)
.++..|++||.+.+..++.++|+||||+++|++++|..||.+.....+.......... ........+..+.+++.+|
T Consensus 177 ~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~ 253 (305)
T cd05609 177 CGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE---WPEGDEALPADAQDLISRL 253 (305)
T ss_pred ccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC---CCCccccCCHHHHHHHHHH
Confidence 4577899999998888899999999999999999999998765443332222211110 0111223567899999999
Q ss_pred hccCCCCCCCHHHHHHHhcc
Q 019495 142 LQYEPRERPNPKSLVTALSP 161 (340)
Q Consensus 142 l~~~p~~Rps~~~i~~~L~~ 161 (340)
|+.+|++||++.++.+.|..
T Consensus 254 l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 254 LRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred hccChhhccCccCHHHHHhC
Confidence 99999999997666665544
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-25 Score=197.28 Aligned_cols=156 Identities=17% Similarity=0.260 Sum_probs=119.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC---ccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~~~ 77 (340)
++|..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... ...++..|++||++.+..
T Consensus 104 l~~~~~~~~~~~i~~al~~LH~~~-i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~ 182 (287)
T cd07838 104 LPPETIKDLMRQLLRGVDFLHSHR-IVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSS 182 (287)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhEEEccCCCEEEeccCcceeccCCcccccccccccccChHHhccCC
Confidence 478889999999999999999999 9999999999999999999999999987654332 234678899999999888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccc--------------ccccC-------CCCCchhHHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT--------------DSCLE-------GQFTDDDGTELVR 136 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~--------------~~~~~-------~~~~~~~~~~l~~ 136 (340)
++.++|+||||+++|+|++|..||................. ...+. .......+..+.+
T Consensus 183 ~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (287)
T cd07838 183 YATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLD 262 (287)
T ss_pred CCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHH
Confidence 89999999999999999999887765432221111111000 00000 0011234577889
Q ss_pred HHHHhhccCCCCCCCHHHHHH
Q 019495 137 LASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 137 li~~cl~~~p~~Rps~~~i~~ 157 (340)
++.+||+.||++||++.+++.
T Consensus 263 li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 263 LLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred HHHHHhccCCccCCCHHHHhc
Confidence 999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.3e-26 Score=198.77 Aligned_cols=155 Identities=20% Similarity=0.338 Sum_probs=119.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHh-CCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~-~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.....++.|++.||.|||+ .+ ++|+||||+||+++.++.++|+|||.+...... ....++..|++||++.+..
T Consensus 97 ~~~~~~~~~~~~l~~~l~~lH~~~~-i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE~~~~~~ 175 (265)
T cd06605 97 IPERILGKIAVAVLKGLTYLHEKHK-IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGND 175 (265)
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCC-eecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcccCChhccCHHHHcCCC
Confidence 3567778899999999999999 88 999999999999999999999999987654322 1256788999999998888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHH-HhhhhhccccccccCCCCCch-hHHHHHHHHHHhhccCCCCCCCHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDRNLQMLTDSCLEGQFTDD-DGTELVRLASRCLQYEPRERPNPKSL 155 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~~p~~Rps~~~i 155 (340)
++.++|+||||+++++|++|+.|+....... ............ .....+.. .+..+.++|.+||..+|++||++.++
T Consensus 176 ~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l 254 (265)
T cd06605 176 YSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE-PPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKEL 254 (265)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC-CCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHH
Confidence 9999999999999999999998886531000 000001111110 01112222 56789999999999999999999998
Q ss_pred HH
Q 019495 156 VT 157 (340)
Q Consensus 156 ~~ 157 (340)
+.
T Consensus 255 l~ 256 (265)
T cd06605 255 LE 256 (265)
T ss_pred hh
Confidence 74
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.7e-26 Score=201.50 Aligned_cols=156 Identities=18% Similarity=0.345 Sum_probs=117.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....+++.|++||++.+.
T Consensus 101 ~~~~~~~~~~~qi~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~ 179 (301)
T cd07873 101 INMHNVKLFLFQLLRGLNYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGS 179 (301)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccceeecccCcHHHhCC
Confidence 356778889999999999999999 999999999999999999999999998754322 123457899999998753
Q ss_pred -CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcc-----------ccc---------cccC----CCCCchhH
Q 019495 77 -RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM-----------LTD---------SCLE----GQFTDDDG 131 (340)
Q Consensus 77 -~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~-----------~~~---------~~~~----~~~~~~~~ 131 (340)
.++.++||||||+++|+|++|+.||............... ... +... .......+
T Consensus 180 ~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (301)
T cd07873 180 TDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLD 259 (301)
T ss_pred CCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCC
Confidence 4788999999999999999999888654332111100000 000 0000 00112346
Q ss_pred HHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 132 TELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 132 ~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
..+.++|.+|++.||.+|||+.+++.
T Consensus 260 ~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 260 SDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 78899999999999999999999985
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-25 Score=200.05 Aligned_cols=156 Identities=20% Similarity=0.317 Sum_probs=118.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhC-CCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~-~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.....++.||+.||.|||++ + ++||||||+||+++.++.++|+|||++...... ....++..|++||++.+..
T Consensus 96 ~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE~~~~~~ 174 (308)
T cd06615 96 IPENILGKISIAVLRGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTH 174 (308)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhCC-EEECCCChHHEEEecCCcEEEccCCCcccccccccccCCCCcCccChhHhcCCC
Confidence 46678889999999999999985 6 999999999999999999999999988754332 3456788999999998878
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhh---hccccc----------------------------cccCCCC
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN---LQMLTD----------------------------SCLEGQF 126 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~---~~~~~~----------------------------~~~~~~~ 126 (340)
++.++|+||||+++|+|++|+.||............ ...... ....+..
T Consensus 175 ~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (308)
T cd06615 175 YTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKL 254 (308)
T ss_pred CCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccC
Confidence 899999999999999999999887543221111000 000000 0000011
Q ss_pred C-chhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 127 T-DDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 127 ~-~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+ ...+..+.+++.+||..+|++||++.+++.
T Consensus 255 ~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 286 (308)
T cd06615 255 PSGAFSDEFQDFVDKCLKKNPKERADLKELTK 286 (308)
T ss_pred cCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 124567999999999999999999999985
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.8e-26 Score=199.22 Aligned_cols=156 Identities=21% Similarity=0.353 Sum_probs=119.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
+++.+...++.||+.||.|||+++ ++||||+|+||++++++.+||+|||++....... ...++..|+|||++.+
T Consensus 97 ~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~ 175 (288)
T cd07833 97 LPPDAVRSYIWQLLQAIAYCHSHN-IIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVG 175 (288)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCcccccCCcCCchhcC
Confidence 356788899999999999999999 9999999999999999999999999987654332 3456788999999988
Q ss_pred C-CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhh--------------------c--ccccc----ccCCCCCc
Q 019495 76 G-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--------------------Q--MLTDS----CLEGQFTD 128 (340)
Q Consensus 76 ~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~--------------------~--~~~~~----~~~~~~~~ 128 (340)
. .++.++|+||||+++|+|++|..||............. . ...+. .....++.
T Consensus 176 ~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (288)
T cd07833 176 DTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPG 255 (288)
T ss_pred CCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCC
Confidence 7 78999999999999999999998876432111000000 0 00000 00111233
Q ss_pred hhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 129 DDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 129 ~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.++..+.+++++||+.+|++||++++++.
T Consensus 256 ~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 256 KVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 34688999999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=201.35 Aligned_cols=152 Identities=21% Similarity=0.230 Sum_probs=118.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----------------------
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---------------------- 58 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---------------------- 58 (340)
+++.....++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++......
T Consensus 100 l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (316)
T cd05574 100 LSEEVARFYAAEVLLALEYLHLLG-IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPS 178 (316)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccch
Confidence 467788889999999999999999 999999999999999999999999987643211
Q ss_pred -----------CccccCCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCC
Q 019495 59 -----------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 127 (340)
Q Consensus 59 -----------~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (340)
....|+..|+|||++.+..++.++||||||+++|+|++|..||............. .........
T Consensus 179 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~----~~~~~~~~~ 254 (316)
T cd05574 179 ETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNIL----KKEVTFPGS 254 (316)
T ss_pred hhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHh----cCCccCCCc
Confidence 12346788999999988888999999999999999999999986543322111111 111111111
Q ss_pred chhHHHHHHHHHHhhccCCCCCCC----HHHHHH
Q 019495 128 DDDGTELVRLASRCLQYEPRERPN----PKSLVT 157 (340)
Q Consensus 128 ~~~~~~l~~li~~cl~~~p~~Rps----~~~i~~ 157 (340)
...+..+.+++.+||..+|++||+ +.+++.
T Consensus 255 ~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 255 PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 124688999999999999999999 777765
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=198.04 Aligned_cols=155 Identities=19% Similarity=0.261 Sum_probs=117.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccC-C
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRT-G 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~-~ 76 (340)
++|.+...++.||+.||.|||+.+ ++||||+|+||+++. +.+||+|||+++..... ....++..|+|||++.+ +
T Consensus 97 ~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 174 (282)
T cd07831 97 LPEKRVKSYMYQLLKSLDHMHRNG-IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDG 174 (282)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEcC-CCeEEEecccccccccCCCcCCCCCCcccCChhHhhcCC
Confidence 478889999999999999999999 999999999999999 99999999998765433 23356889999997654 4
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhc-----------c-----ccccccCC-------CCCchhHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------M-----LTDSCLEG-------QFTDDDGTE 133 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~-----------~-----~~~~~~~~-------~~~~~~~~~ 133 (340)
.++.++|+|||||++|||++|..||.............. . ..+..... ......+..
T Consensus 175 ~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (282)
T cd07831 175 YYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAE 254 (282)
T ss_pred CCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHH
Confidence 578899999999999999999988865422111000000 0 00000000 001234688
Q ss_pred HHHHHHHhhccCCCCCCCHHHHHH
Q 019495 134 LVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 134 l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+.+++.+||+.+|++||++.+++.
T Consensus 255 ~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 255 GLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred HHHHHHHHhccCcccccCHHHHhh
Confidence 999999999999999999999875
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.3e-26 Score=227.23 Aligned_cols=149 Identities=15% Similarity=0.148 Sum_probs=109.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC-------------------CCCeEEeccCCCccCCCC---
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-------------------DGNPRLSTFGLMKNSRDG--- 58 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~-------------------~~~~kl~dfg~~~~~~~~--- 58 (340)
+++.+.+.++.||+.||.|||+++ ||||||||+||||+. ++.+|++|||+++.....
T Consensus 77 ~~~~~~~~i~~qi~~al~~lH~~g-IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~ 155 (793)
T PLN00181 77 VDAFECFHVFRQIVEIVNAAHSQG-IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSER 155 (793)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCC-eeeccCCchhEEEcccCcEEEeeccccCcccccccCccccccccccccccccccc
Confidence 467789999999999999999999 999999999999954 445667777776532110
Q ss_pred -----------------CccccCCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccc
Q 019495 59 -----------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 121 (340)
Q Consensus 59 -----------------~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~ 121 (340)
....+|+.|||||++.+..++.++|||||||++|||++|..|+..... .+... .....++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~-~~~~~-~~~~~~~- 232 (793)
T PLN00181 156 RIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR-TMSSL-RHRVLPP- 232 (793)
T ss_pred chhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH-HHHHH-HHhhcCh-
Confidence 012467889999999988899999999999999999998766543211 11111 1111111
Q ss_pred cCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 122 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 122 ~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.. ....+....++.+||+.+|.+||++.+++.
T Consensus 233 ---~~-~~~~~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 233 ---QI-LLNWPKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred ---hh-hhcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence 11 112245678899999999999999999985
|
|
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.3e-26 Score=204.80 Aligned_cols=157 Identities=17% Similarity=0.286 Sum_probs=116.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-------ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~y~aPE~~ 73 (340)
+++.....++.||+.||.|||+.+ |+||||||+||+++.++.++|+|||++....... ...++..|+|||.+
T Consensus 103 l~~~~~~~i~~ql~~aL~~LH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 181 (336)
T cd07849 103 LSNDHIQYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIM 181 (336)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHh
Confidence 467788889999999999999999 9999999999999999999999999987643221 23568889999987
Q ss_pred cC-CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhh-----------hcccccc---------ccCCC-----CC
Q 019495 74 RT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------LQMLTDS---------CLEGQ-----FT 127 (340)
Q Consensus 74 ~~-~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~-----------~~~~~~~---------~~~~~-----~~ 127 (340)
.+ ..++.++|+||||+++|+|++|+.||............ ...+... ..... ..
T Consensus 182 ~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (336)
T cd07849 182 LNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLF 261 (336)
T ss_pred hCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHh
Confidence 54 45789999999999999999999888643211100000 0000000 00000 01
Q ss_pred chhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 019495 128 DDDGTELVRLASRCLQYEPRERPNPKSLVTA 158 (340)
Q Consensus 128 ~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 158 (340)
+..+..+.+++.+||+.+|++||++.+++..
T Consensus 262 ~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 262 PNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred cccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 2235678999999999999999999999863
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=202.43 Aligned_cols=156 Identities=19% Similarity=0.305 Sum_probs=120.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-------ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~y~aPE~~ 73 (340)
+++..+..++.||+.||.|||+.+ ++||||||.||+++.++.++|+|||++....... ...++..|+|||++
T Consensus 100 l~~~~~~~i~~~l~~~l~~LH~~g-i~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 178 (330)
T cd07834 100 LTDDHIQYFLYQILRGLKYLHSAN-VIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELL 178 (330)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceee
Confidence 467788899999999999999999 9999999999999999999999999987654432 23567889999999
Q ss_pred cCC-CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccc-------------------------cccCCCCC
Q 019495 74 RTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD-------------------------SCLEGQFT 127 (340)
Q Consensus 74 ~~~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~ 127 (340)
.+. .++.++|+||||+++|+|++|..||.................. ........
T Consensus 179 ~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (330)
T cd07834 179 LSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLF 258 (330)
T ss_pred ecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhc
Confidence 877 7899999999999999999999988654332211111110000 00000112
Q ss_pred chhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 128 DDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 128 ~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
...+..+.+++.+||+.+|++||++.+++.
T Consensus 259 ~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 288 (330)
T cd07834 259 PGASPEAIDLLEKMLVFDPKKRITADEALA 288 (330)
T ss_pred ccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 234678999999999999999999999985
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-25 Score=193.11 Aligned_cols=153 Identities=23% Similarity=0.300 Sum_probs=121.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.....++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||.+...... ....++..|++||.+.+..
T Consensus 95 ~~~~~~~~i~~~i~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~ 173 (253)
T cd05122 95 LTESQIAYVCKELLKGLEYLHSNG-IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKP 173 (253)
T ss_pred CCHHHHHHHHHHHHHHHHHhhcCC-EecCCCCHHHEEEccCCeEEEeeccccccccccccccceecCCcccCHHHHcCCC
Confidence 467888999999999999999999 999999999999999999999999998776554 3456788999999998888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
++.++|+||||+++++|++|+.|+................. +.. ..+...+..+.+++.+||+.||++|||+.+++.
T Consensus 174 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 174 YDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGP-PGL--RNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred CCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCC-CCc--CcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 89999999999999999999988765422111111111100 000 111112578999999999999999999999874
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-25 Score=201.54 Aligned_cols=153 Identities=22% Similarity=0.236 Sum_probs=128.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC----CCCeEEeccCCCccCCCC---CccccCCcccCccccc
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE----DGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~----~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~ 74 (340)
++.....++.||+.++.|||+.| |+||||||+|+|+.. ++.+|++|||++.....+ ...+||+.|+|||++.
T Consensus 133 sE~da~~~~~~il~av~~lH~~g-vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~ 211 (382)
T KOG0032|consen 133 SERDAAGIIRQILEAVKYLHSLG-VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLG 211 (382)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC-ceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhc
Confidence 56778899999999999999999 999999999999953 357999999999887764 3457999999999999
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
...++...|+||+|+++|.|++|.+||...............- ..+.....+..+..+.+++++|+..||.+|+++.+
T Consensus 212 ~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~--~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~ 289 (382)
T KOG0032|consen 212 GRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGD--FDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQ 289 (382)
T ss_pred CCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCC--CCCCCCCccccCHHHHHHHHHhcccCcccCCCHHH
Confidence 8899999999999999999999999998876544433222221 12344445567899999999999999999999999
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
+++
T Consensus 290 ~L~ 292 (382)
T KOG0032|consen 290 ALQ 292 (382)
T ss_pred Hhc
Confidence 987
|
|
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-25 Score=198.29 Aligned_cols=156 Identities=21% Similarity=0.347 Sum_probs=119.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~ 76 (340)
+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++++|||.+....... ...++..|++||.+.+.
T Consensus 95 ~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~ 173 (283)
T cd05118 95 LPESLIKSYLYQLLQGLAFCHSHG-ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGD 173 (283)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcC
Confidence 467888999999999999999999 9999999999999999999999999887655432 23467789999998876
Q ss_pred -CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccc-----------------cc-------CCCCCchhH
Q 019495 77 -RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS-----------------CL-------EGQFTDDDG 131 (340)
Q Consensus 77 -~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~-----------------~~-------~~~~~~~~~ 131 (340)
.++.++|+||||+++|+|++|+.||+..............+..+ .+ ........+
T Consensus 174 ~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (283)
T cd05118 174 KGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNAS 253 (283)
T ss_pred CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhC
Confidence 68899999999999999999998886543211111100000000 00 001122356
Q ss_pred HHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 132 TELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 132 ~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
..+.++|.+||+.||.+||++.+++.
T Consensus 254 ~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 254 PQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred HHHHHHHHHHhccCcccCcCHHHHhh
Confidence 78999999999999999999999874
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.6e-26 Score=198.69 Aligned_cols=156 Identities=20% Similarity=0.311 Sum_probs=116.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+.+ ++||||+|+||+++.++.+|++|||++....... ...++..|+|||++.+.
T Consensus 97 l~~~~~~~~~~~i~~~l~~lh~~~-i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 175 (284)
T cd07860 97 IPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 175 (284)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccccccccccCCeEEecC
Confidence 467888999999999999999999 9999999999999999999999999887544321 22357889999988764
Q ss_pred C-CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccc--------------------ccccC---CCCCchhHH
Q 019495 77 R-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT--------------------DSCLE---GQFTDDDGT 132 (340)
Q Consensus 77 ~-~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~---~~~~~~~~~ 132 (340)
. ++.++|+||||+++|+|+||+.||................. ..... .......+.
T Consensus 176 ~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (284)
T cd07860 176 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDE 255 (284)
T ss_pred CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCH
Confidence 4 58899999999999999999998865432111111000000 00000 001123457
Q ss_pred HHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 133 ELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 133 ~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.+.+++.+||+.||++||++.+++.
T Consensus 256 ~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 256 DGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHHHHHHhcCCCcccCCCHHHHhc
Confidence 7899999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.9e-26 Score=199.68 Aligned_cols=156 Identities=18% Similarity=0.245 Sum_probs=117.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC-CCCeEEeccCCCccCCCC----CccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~-~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~ 75 (340)
+++.....++.||+.||.|||+++ ++||||+|+||+++. ++.+||+|||+++..... ....+++.|+|||++.+
T Consensus 107 ~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 185 (295)
T cd07837 107 LPAKTIKSFMYQLLKGVAHCHKHG-VMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLG 185 (295)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEecCCCeEEEeecccceecCCCccccCCcccccCCCChHHhhC
Confidence 467888999999999999999999 999999999999998 889999999988754322 12345788999998865
Q ss_pred -CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccc------------------c----cCCCCCchhHH
Q 019495 76 -GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS------------------C----LEGQFTDDDGT 132 (340)
Q Consensus 76 -~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~------------------~----~~~~~~~~~~~ 132 (340)
..++.++|+||||+++|+|++|..||...............+..+ . ......+..+.
T Consensus 186 ~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (295)
T cd07837 186 STHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSP 265 (295)
T ss_pred CCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCH
Confidence 357899999999999999999998886543222111111000000 0 00001123567
Q ss_pred HHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 133 ELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 133 ~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.+.++|.+||+.||.+||++.+++.
T Consensus 266 ~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 266 EGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred HHHHHHHHHccCChhhcCCHHHHhc
Confidence 8999999999999999999999874
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-25 Score=194.10 Aligned_cols=152 Identities=22% Similarity=0.304 Sum_probs=121.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
+++..+..++.||+.||.|||+++ ++|+||+|+||+++.++.++++|||++...... ....++..|++||++.+..
T Consensus 90 l~~~~~~~~~~~i~~~l~~lH~~~-~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~ 168 (262)
T cd05572 90 FDEYTARFYIACVVLAFEYLHNRG-IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKG 168 (262)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcCccChhHhcCCC
Confidence 466788899999999999999999 999999999999999999999999998766543 2345788999999998878
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcch--hHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC----
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHA--LDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN---- 151 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps---- 151 (340)
++.++|+||||+++|+|++|..|+.... ......... .......++...+..+.+++.+||+.+|++||+
T Consensus 169 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~ 244 (262)
T cd05572 169 YDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDIL----KGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKG 244 (262)
T ss_pred CCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHh----ccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCccc
Confidence 8999999999999999999999886543 111111111 111122344445688999999999999999999
Q ss_pred -HHHHHH
Q 019495 152 -PKSLVT 157 (340)
Q Consensus 152 -~~~i~~ 157 (340)
+.++++
T Consensus 245 ~~~~l~~ 251 (262)
T cd05572 245 GIKDIKK 251 (262)
T ss_pred CHHHHhc
Confidence 777764
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-25 Score=197.32 Aligned_cols=150 Identities=19% Similarity=0.249 Sum_probs=120.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-ccccCCcccCcccccCCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-SYSTNLAFTPPEYLRTGRVT 79 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~ 79 (340)
|++..+..++.||+.||.|||+.+ ++||||+|+||+++.++.+||+|||+++...... ...+++.|++||.+.+...+
T Consensus 98 l~~~~~~~~~~qil~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 176 (290)
T cd05580 98 FPEPVARFYAAQVVLALEYLHSLD-IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCGTPEYLAPEIILSKGYG 176 (290)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCCCCccccChhhhcCCCCC
Confidence 467788899999999999999999 9999999999999999999999999987655442 34578899999999887888
Q ss_pred CCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC-----CHHH
Q 019495 80 PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP-----NPKS 154 (340)
Q Consensus 80 ~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s~~~ 154 (340)
.++|+||||+++|+|++|..||............... ...++...+..+.+++.+||..||.+|+ ++.+
T Consensus 177 ~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~ 250 (290)
T cd05580 177 KAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEG------KVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVND 250 (290)
T ss_pred ccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC------CccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHH
Confidence 9999999999999999999888654422211111111 1233445568899999999999999998 6667
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
++.
T Consensus 251 l~~ 253 (290)
T cd05580 251 IKN 253 (290)
T ss_pred HHc
Confidence 664
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.4e-26 Score=221.04 Aligned_cols=152 Identities=22% Similarity=0.239 Sum_probs=115.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCC------CccccCCCCCCEEecC-----------------CCCeEEeccCCCccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKG------RALYHDLNAYRILFDE-----------------DGNPRLSTFGLMKNSRD 57 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~------~iiH~dlk~~nill~~-----------------~~~~kl~dfg~~~~~~~ 57 (340)
|++...+.|+.||+.||.|||+.+ .||||||||+||||+. .+.+||+|||++.....
T Consensus 115 L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~ 194 (1021)
T PTZ00266 115 IEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGI 194 (1021)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccc
Confidence 467888999999999999999832 2999999999999964 33489999999876543
Q ss_pred C---CccccCCcccCcccccC--CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHH
Q 019495 58 G---KSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 132 (340)
Q Consensus 58 ~---~~~~~~~~y~aPE~~~~--~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (340)
. ....+|+.|+|||++.+ ..++.++||||||||+|+|++|..||............+.... . ......+.
T Consensus 195 ~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p--~---lpi~~~S~ 269 (1021)
T PTZ00266 195 ESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGP--D---LPIKGKSK 269 (1021)
T ss_pred cccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCC--C---CCcCCCCH
Confidence 3 23468999999999864 3578999999999999999999999864322111111111111 0 01123457
Q ss_pred HHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 133 ELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 133 ~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.+.+||..||+.+|.+||++.+++.
T Consensus 270 eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 270 ELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred HHHHHHHHHhcCChhHCcCHHHHhc
Confidence 8999999999999999999999984
|
|
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=203.56 Aligned_cols=156 Identities=17% Similarity=0.246 Sum_probs=118.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-ccccCCcccCcccccC-CCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-SYSTNLAFTPPEYLRT-GRV 78 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-~~~~~~~y~aPE~~~~-~~~ 78 (340)
+++.....++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++...... ...++..|+|||++.+ ..+
T Consensus 114 ~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 192 (342)
T cd07879 114 LSEDKVQYLVYQMLCGLKYIHSAG-IIHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHY 192 (342)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCCCCceeeecccChhhhcCcccc
Confidence 467778889999999999999999 9999999999999999999999999987654332 3456788999999876 457
Q ss_pred CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccc----------------------cccccCCC---CCchhHHH
Q 019495 79 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML----------------------TDSCLEGQ---FTDDDGTE 133 (340)
Q Consensus 79 ~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~---~~~~~~~~ 133 (340)
+.++|+|||||++|||++|+.||................ .+...... ..+..+..
T Consensus 193 ~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (342)
T cd07879 193 NQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQ 272 (342)
T ss_pred CchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHH
Confidence 889999999999999999999886543211111100000 00000000 01134567
Q ss_pred HHHHHHHhhccCCCCCCCHHHHHH
Q 019495 134 LVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 134 l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+.+++.+||+.||.+||++.+++.
T Consensus 273 ~~~li~~~l~~dP~~R~~~~e~l~ 296 (342)
T cd07879 273 AVDLLEKMLELDVDKRLTATEALE 296 (342)
T ss_pred HHHHHHHHcCCChhhCcCHHHHhc
Confidence 899999999999999999999984
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=202.40 Aligned_cols=156 Identities=21% Similarity=0.328 Sum_probs=117.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC---------ccccCCcccCcc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---------SYSTNLAFTPPE 71 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~---------~~~~~~~y~aPE 71 (340)
++|..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++....... ...++..|++||
T Consensus 104 ~~~~~~~~i~~qi~~~L~~LH~~~-i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE 182 (337)
T cd07852 104 LEDVHKRYIMYQLLKALKYIHSGN-VIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPE 182 (337)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCce
Confidence 467788899999999999999999 9999999999999999999999999887543221 235688899999
Q ss_pred cccC-CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhh-----------------------hccccccc--cCCC
Q 019495 72 YLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------------------LQMLTDSC--LEGQ 125 (340)
Q Consensus 72 ~~~~-~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~-----------------------~~~~~~~~--~~~~ 125 (340)
++.+ ...+.++|+||||+++|+|++|+.||............ +....... ....
T Consensus 183 ~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (337)
T cd07852 183 ILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDE 262 (337)
T ss_pred eeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhh
Confidence 8865 45788999999999999999999888653221111100 00000000 0001
Q ss_pred CCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 126 FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 126 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
..+..+..+.+++.+||+.+|++|||+.+++.
T Consensus 263 ~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~ 294 (337)
T cd07852 263 LLPKASDDALDLLKKLLVFNPNKRLTAEEALE 294 (337)
T ss_pred hccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence 11225678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-26 Score=190.77 Aligned_cols=149 Identities=18% Similarity=0.251 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC---ccccCCcccCcccccC--CCCCCCcc
Q 019495 9 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRT--GRVTPESV 83 (340)
Q Consensus 9 i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~--~~~~~~~D 83 (340)
|..-.+.||.||-+..+|||||+||+|||++..|.+||||||++....+.- .-.|..+|||||-+.. ..|+.+||
T Consensus 172 ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSD 251 (361)
T KOG1006|consen 172 ITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSD 251 (361)
T ss_pred eeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhh
Confidence 344457899999998779999999999999999999999999987655442 2357889999999864 35899999
Q ss_pred eehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCC-CCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 84 IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ-FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 84 i~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+||||+++||+.||..|+..|......-..+..--++.+... -....+..+..++.-|+.+|-..||++.++..
T Consensus 252 vWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 252 VWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred hhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 999999999999999888665432211111111111111111 11225688999999999999999999999875
|
|
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=198.08 Aligned_cols=156 Identities=19% Similarity=0.293 Sum_probs=117.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
+++.++..++.||+.||.|||+.+ ++|+||||+||+++.++.++++|||++....... ...++..|+|||++.+
T Consensus 96 ~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 174 (286)
T cd07832 96 LPEAQVKSYMRMLLKGVAYMHANG-IMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYG 174 (286)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccccCcccccCceeeec
Confidence 467788999999999999999999 9999999999999999999999999887654332 3456889999999875
Q ss_pred C-CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccc-----------------cccC-------CCCCchh
Q 019495 76 G-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD-----------------SCLE-------GQFTDDD 130 (340)
Q Consensus 76 ~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~-------~~~~~~~ 130 (340)
. .++.++||||+|+++++|++|.++|...............+.. .... .......
T Consensus 175 ~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (286)
T cd07832 175 ARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDA 254 (286)
T ss_pred cccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCc
Confidence 4 4688999999999999999997766543221111110000000 0000 0011234
Q ss_pred HHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 131 GTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 131 ~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+..+.+++.+||+.+|++||++++++.
T Consensus 255 ~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 255 SPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred cHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 588999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-25 Score=202.11 Aligned_cols=155 Identities=17% Similarity=0.205 Sum_probs=115.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
+++.....++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++...... ...|++.|+|||++.+
T Consensus 99 l~~~~~~~~~~qi~~~L~~lH~~~-iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 177 (331)
T cd05624 99 LPEDMARFYIAEMVLAIHSIHQLH-YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQA 177 (331)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeeccCchHHEEEcCCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhc
Confidence 356778889999999999999999 9999999999999999999999999987654322 2458999999999875
Q ss_pred -----CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCC--
Q 019495 76 -----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRE-- 148 (340)
Q Consensus 76 -----~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~-- 148 (340)
+.++.++|+|||||++|+|++|+.||....................+. ......+..+.+++.+|+..++++
T Consensus 178 ~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p-~~~~~~~~~~~~li~~ll~~~~~~~~ 256 (331)
T cd05624 178 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFP-SHITDVSEEAKDLIQRLICSRERRLG 256 (331)
T ss_pred cccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCC-CccccCCHHHHHHHHHHccCchhhcC
Confidence 457889999999999999999999987543322221111110000011 111234678999999999866544
Q ss_pred CCCHHHHHH
Q 019495 149 RPNPKSLVT 157 (340)
Q Consensus 149 Rps~~~i~~ 157 (340)
|+++.+++.
T Consensus 257 ~~~~~~~~~ 265 (331)
T cd05624 257 QNGIEDFKK 265 (331)
T ss_pred CCCHHHHhc
Confidence 357777764
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-25 Score=196.16 Aligned_cols=153 Identities=20% Similarity=0.272 Sum_probs=120.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++..|++||++.+.
T Consensus 113 l~~~~~~~i~~~i~~~L~~lH~~g-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~ 191 (286)
T cd06614 113 MNEPQIAYVCREVLQGLEYLHSQN-VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRK 191 (286)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhccccCCcccCCHhHhcCC
Confidence 467889999999999999999999 999999999999999999999999987654332 233467889999999888
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++|+||||+++|+|++|..|+................. .....+..++..+.+++.+||+.+|..||++.+++
T Consensus 192 ~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il 268 (286)
T cd06614 192 DYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGI---PPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELL 268 (286)
T ss_pred CCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC---CCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHh
Confidence 889999999999999999999988765432211111111100 01111222567899999999999999999999997
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 269 ~ 269 (286)
T cd06614 269 Q 269 (286)
T ss_pred h
Confidence 5
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=198.46 Aligned_cols=156 Identities=18% Similarity=0.335 Sum_probs=117.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccC-
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRT- 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~- 75 (340)
++|.+...++.||+.||.|||+.+ ++||||+|+||+++.++.++|+|||++....... ...++..|++||++.+
T Consensus 97 ~~~~~~~~~~~~i~~~l~~LH~~~-i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 175 (286)
T cd07846 97 LDESRVRKYLFQILRGIEFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGD 175 (286)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcccceeeccCcHHhccc
Confidence 468899999999999999999999 9999999999999999999999999887543321 2346788999999875
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhc--------------------cccccccC-----CCCCchh
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------------MLTDSCLE-----GQFTDDD 130 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~-----~~~~~~~ 130 (340)
..++.++||||||+++|+|++|.+||.............. ....+... ....+.+
T Consensus 176 ~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (286)
T cd07846 176 TKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKL 255 (286)
T ss_pred cccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCc
Confidence 3467899999999999999999987764322110000000 00000000 0012245
Q ss_pred HHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 131 GTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 131 ~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+..+.+++.+||+.+|++||++.+++.
T Consensus 256 ~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 256 SGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred CHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 678999999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-25 Score=195.31 Aligned_cols=153 Identities=16% Similarity=0.228 Sum_probs=119.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC----------CCccccCCcccCc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----------GKSYSTNLAFTPP 70 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----------~~~~~~~~~y~aP 70 (340)
+++.....++.|++.||.|||+.+ ++|+||+|+||+++.++.++++|||++..... .....++..|++|
T Consensus 99 ~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 177 (265)
T cd06631 99 LPEPVFCKYTKQILDGVAYLHNNC-VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAP 177 (265)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccCh
Confidence 356777889999999999999999 99999999999999999999999998765321 1123568899999
Q ss_pred ccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC
Q 019495 71 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150 (340)
Q Consensus 71 E~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 150 (340)
|++.+..++.++|+||||+++|+|++|..||........... ... ........+...+..+.+++.+||..+|++||
T Consensus 178 e~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp 254 (265)
T cd06631 178 EVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFY-IGA--HRGLMPRLPDSFSAAAIDFVTSCLTRDQHERP 254 (265)
T ss_pred hhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHH-hhh--ccCCCCCCCCCCCHHHHHHHHHHhcCCcccCC
Confidence 999988889999999999999999999988864321111000 000 00112234455678899999999999999999
Q ss_pred CHHHHHH
Q 019495 151 NPKSLVT 157 (340)
Q Consensus 151 s~~~i~~ 157 (340)
++.+++.
T Consensus 255 ~~~~~l~ 261 (265)
T cd06631 255 SALQLLR 261 (265)
T ss_pred CHHHHhc
Confidence 9999874
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-25 Score=194.07 Aligned_cols=152 Identities=21% Similarity=0.257 Sum_probs=120.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.....++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++...... ....++..|++||.+....
T Consensus 99 ~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~ 177 (258)
T cd06632 99 FPEPVIRLYTRQILLGLEYLHDRN-TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQG 177 (258)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccceeccccccccccCCCcceeCHHHhcCCC
Confidence 467788899999999999999999 999999999999999999999999987754433 2345788899999987665
Q ss_pred -CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 78 -VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 78 -~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
++.++|+||||+++|+|++|+.||.............. ......++...+..+.+++.+||+.+|++||++.+++
T Consensus 178 ~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l 253 (258)
T cd06632 178 GYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGR----SKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELL 253 (258)
T ss_pred CCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHh----cccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHh
Confidence 88999999999999999999998865432111111111 0111234455668899999999999999999999987
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 254 ~ 254 (258)
T cd06632 254 E 254 (258)
T ss_pred c
Confidence 4
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.1e-25 Score=198.33 Aligned_cols=156 Identities=22% Similarity=0.291 Sum_probs=115.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-----------CccccCCcccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----------KSYSTNLAFTP 69 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-----------~~~~~~~~y~a 69 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.++++|||.+...... ....++..|+|
T Consensus 98 ~~~~~~~~~~~~l~~~L~~LH~~~-ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~a 176 (314)
T cd08216 98 LPELAIAFILKDVLNALDYIHSKG-FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLS 176 (314)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccC
Confidence 356677889999999999999999 999999999999999999999999987543211 12345678999
Q ss_pred cccccC--CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccc----c------------------------c
Q 019495 70 PEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML----T------------------------D 119 (340)
Q Consensus 70 PE~~~~--~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~----~------------------------~ 119 (340)
||++.+ ..++.++|+|||||++|+|++|..||................ . .
T Consensus 177 PE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (314)
T cd08216 177 PEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNR 256 (314)
T ss_pred HHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchh
Confidence 999875 357889999999999999999999886532211110000000 0 0
Q ss_pred cccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 120 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 120 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.......+...+.++.+++.+||+.||++|||+.+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 257 DSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred hhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 00011122334578899999999999999999999985
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.1e-25 Score=195.89 Aligned_cols=154 Identities=17% Similarity=0.299 Sum_probs=118.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--CccccCCcccCcccccCCCCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTGRVT 79 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~ 79 (340)
++.....++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++..|++||.+.+..++
T Consensus 103 ~~~~~~~i~~~i~~~L~~lH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~ 181 (287)
T cd06621 103 GEKVLGKIAESVLKGLSYLHSRK-IIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKPYS 181 (287)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecCCeEEEeeccccccccccccccccCCccccCHHHhcCCCCC
Confidence 45677889999999999999999 999999999999999999999999997654432 234567889999999888899
Q ss_pred CCcceehHHHHHHHHhhCCCCCCcchh-----HHHhhhhhccccccccCCCCC--chhHHHHHHHHHHhhccCCCCCCCH
Q 019495 80 PESVIYSFGTLLLDLLSGKHIPPSHAL-----DLIRDRNLQMLTDSCLEGQFT--DDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 80 ~~~Di~s~G~il~el~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.++|+||||+++|+|++|..|+..... .... ........+....... ...+..+.+++.+||..+|.+|||+
T Consensus 182 ~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~ 260 (287)
T cd06621 182 ITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELL-SYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTP 260 (287)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHH-HHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCH
Confidence 999999999999999999988764411 1111 1111111111111111 2346789999999999999999999
Q ss_pred HHHHH
Q 019495 153 KSLVT 157 (340)
Q Consensus 153 ~~i~~ 157 (340)
.+++.
T Consensus 261 ~eil~ 265 (287)
T cd06621 261 WDMLE 265 (287)
T ss_pred HHHHh
Confidence 99985
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-25 Score=194.47 Aligned_cols=152 Identities=16% Similarity=0.271 Sum_probs=116.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC-CCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~-~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
++.....++.||+.||.|||+++ |+||||||+||+++. ++.++|+|||++...... ....++..|++||++.+.
T Consensus 106 ~~~~~~~~~~qi~~al~~lH~~~-i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~ 184 (268)
T cd06624 106 NEQTIIFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKG 184 (268)
T ss_pred cHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCeEEEecchhheecccCCCccccCCCCccccChhhhccc
Confidence 45677788999999999999999 999999999999976 678999999987654322 223568899999998764
Q ss_pred C--CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 77 R--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 77 ~--~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
. ++.++|+||||+++|+|++|+.|+............ .........++...+..+.+++.+||+.+|++||++.+
T Consensus 185 ~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 261 (268)
T cd06624 185 PRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFK---VGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHD 261 (268)
T ss_pred cccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhh---hhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHH
Confidence 3 788999999999999999999887543211111000 00001122345556688999999999999999999999
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
++.
T Consensus 262 ll~ 264 (268)
T cd06624 262 LLQ 264 (268)
T ss_pred HHh
Confidence 875
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.9e-26 Score=190.29 Aligned_cols=166 Identities=17% Similarity=0.317 Sum_probs=118.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCC----CCeEEeccCCCccCCCC-------CccccCCcccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED----GNPRLSTFGLMKNSRDG-------KSYSTNLAFTP 69 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~----~~~kl~dfg~~~~~~~~-------~~~~~~~~y~a 69 (340)
|+-..+-+|+.||++|+.|||+++ |+||||||.||++..+ |+|||+|||+++...+. ...+-|.+|.|
T Consensus 129 lp~~mvKsilwQil~Gv~YLH~NW-vlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRA 207 (438)
T KOG0666|consen 129 LPRSMVKSILWQILDGVHYLHSNW-VLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRA 207 (438)
T ss_pred CCHHHHHHHHHHHHhhhHHHhhhh-eeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecC
Confidence 345677889999999999999999 9999999999999777 89999999999876533 23355899999
Q ss_pred cccccCC-CCCCCcceehHHHHHHHHhhCCCCCCcchhHHH-----------------------hhhhhcccccc-----
Q 019495 70 PEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI-----------------------RDRNLQMLTDS----- 120 (340)
Q Consensus 70 PE~~~~~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~-----------------------~~~~~~~~~~~----- 120 (340)
||.+.|. .||.+.|+|++|||+.||+|-.+.|.+...... .+..+...++-
T Consensus 208 PELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls 287 (438)
T KOG0666|consen 208 PELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLS 287 (438)
T ss_pred hHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHH
Confidence 9999875 599999999999999999998876644210000 00000000000
Q ss_pred ccCCCCCch------------hHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccccCCCCC
Q 019495 121 CLEGQFTDD------------DGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVP 169 (340)
Q Consensus 121 ~~~~~~~~~------------~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~~~~ 169 (340)
.++.....+ -++...+|+.++|..||-+|.|+++.++ ..++...+.|
T Consensus 288 ~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAle--h~yF~~d~lp 346 (438)
T KOG0666|consen 288 DFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALE--HPYFTEDPLP 346 (438)
T ss_pred HhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhc--ccccccCCCC
Confidence 000000000 1244889999999999999999999886 4444444333
|
|
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-25 Score=196.12 Aligned_cols=153 Identities=18% Similarity=0.257 Sum_probs=118.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccC-
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRT- 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~- 75 (340)
+++.....++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++...... ....++..|++||++..
T Consensus 100 l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~ 178 (280)
T cd06611 100 LTEPQIRYVCRQMLEALNFLHSHK-VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACE 178 (280)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEECCCCCEEEccCccchhhcccccccceeecchhhcCHHHHhhc
Confidence 467788999999999999999999 999999999999999999999999987654322 22357889999999752
Q ss_pred ----CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 76 ----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 76 ----~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
..++.++|+||||+++|+|++|+.||............... .. .....+..++..+.+++.+||+.+|++||+
T Consensus 179 ~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 255 (280)
T cd06611 179 TFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKS-EP--PTLDQPSKWSSSFNDFLKSCLVKDPDDRPT 255 (280)
T ss_pred ccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcC-CC--CCcCCcccCCHHHHHHHHHHhccChhhCcC
Confidence 34678999999999999999999888654322211111111 00 111123345678999999999999999999
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.+++.
T Consensus 256 ~~~il~ 261 (280)
T cd06611 256 AAELLK 261 (280)
T ss_pred HHHHhc
Confidence 999975
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.6e-25 Score=192.79 Aligned_cols=152 Identities=22% Similarity=0.361 Sum_probs=117.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC--------ccccCCcccCccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--------SYSTNLAFTPPEY 72 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~--------~~~~~~~y~aPE~ 72 (340)
+++.....++.|++.||.|||+.+ ++|+||+|.||+++.++.+||+|||++....... ...++..|++||+
T Consensus 96 ~~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~ 174 (264)
T cd06626 96 LDEHVIRVYTLQLLEGLAYLHSHG-IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEV 174 (264)
T ss_pred CChHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhh
Confidence 356778889999999999999999 9999999999999999999999999887654322 1345788999999
Q ss_pred ccCCC---CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCch--hHHHHHHHHHHhhccCCC
Q 019495 73 LRTGR---VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD--DGTELVRLASRCLQYEPR 147 (340)
Q Consensus 73 ~~~~~---~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~li~~cl~~~p~ 147 (340)
+.+.. .+.++|+||||++++++++|+.||............... .....++.. .+..+.+++.+||+.+|+
T Consensus 175 ~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 250 (264)
T cd06626 175 ITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA----GHKPPIPDSLQLSPEGKDFLDRCLESDPK 250 (264)
T ss_pred ccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc----CCCCCCCcccccCHHHHHHHHHHccCCcc
Confidence 98765 789999999999999999999988543211110101111 111122222 367889999999999999
Q ss_pred CCCCHHHHHH
Q 019495 148 ERPNPKSLVT 157 (340)
Q Consensus 148 ~Rps~~~i~~ 157 (340)
+||++.+++.
T Consensus 251 ~R~~~~~i~~ 260 (264)
T cd06626 251 KRPTASELLQ 260 (264)
T ss_pred cCCCHHHHhc
Confidence 9999999874
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=202.00 Aligned_cols=156 Identities=18% Similarity=0.251 Sum_probs=116.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--------CccccCCcccCccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--------KSYSTNLAFTPPEY 72 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--------~~~~~~~~y~aPE~ 72 (340)
+++.....++.||+.||.|||+++ ++||||||+||+++.++.++|+|||+++..... ....++..|+|||+
T Consensus 102 ~~~~~~~~~~~qi~~aL~~LH~~g-ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~ 180 (332)
T cd07857 102 LTDAHFQSFIYQILCGLKYIHSAN-VLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEI 180 (332)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHH
Confidence 467788999999999999999999 999999999999999999999999998754322 12357889999998
Q ss_pred ccC-CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhc-----------cc--------------cccccCCCC
Q 019495 73 LRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------ML--------------TDSCLEGQF 126 (340)
Q Consensus 73 ~~~-~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~-----------~~--------------~~~~~~~~~ 126 (340)
+.+ ..++.++|+||+|+++|++++|..||.............. .+ .+.......
T Consensus 181 ~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (332)
T cd07857 181 MLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESI 260 (332)
T ss_pred HhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhh
Confidence 765 4578999999999999999999988754321111000000 00 000000011
Q ss_pred CchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 127 TDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 127 ~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
....+..+.+++.+|++.||.+||++.+++.
T Consensus 261 ~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 261 FPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred CCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 1224578999999999999999999999874
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=192.85 Aligned_cols=142 Identities=23% Similarity=0.314 Sum_probs=113.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-CccccCCcccCcccccCCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVT 79 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~ 79 (340)
+++.....++.|++.||.|||+++ ++||||||+||+++.++.++++|||.+...... ....++..|+|||.+.++.++
T Consensus 82 l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 160 (237)
T cd05576 82 IPEECVKRWAAEMVVALDALHREG-IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGGISEET 160 (237)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccCCCCCC
Confidence 467888999999999999999999 999999999999999999999999987654433 233456789999999878889
Q ss_pred CCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 80 PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 80 ~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
.++|+||+|+++|+|++|..|+...... . .. .....++...+..+.+++.+|++.||++||++.
T Consensus 161 ~~~DvwslG~il~el~~g~~~~~~~~~~-~-----~~----~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 161 EACDWWSLGAILFELLTGKTLVECHPSG-I-----NT----HTTLNIPEWVSEEARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred chhhHHHHHHHHHHHHHCcchhhcCchh-c-----cc----ccccCCcccCCHHHHHHHHHHccCCHHHhcCCC
Confidence 9999999999999999998765422110 0 00 011123444567899999999999999999963
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-25 Score=196.86 Aligned_cols=156 Identities=21% Similarity=0.305 Sum_probs=117.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.++..++.||+.||.|||+++ ++||||+|+||+++.++.++|+|||+++..... ....++..|+|||++.+.
T Consensus 96 ~~~~~~~~~~~~i~~~L~~lH~~~-~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~ 174 (283)
T cd07835 96 LDPPLIKSYLYQLLQGIAYCHSHR-VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGS 174 (283)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCccccccCCCCCceeecC
Confidence 468889999999999999999999 999999999999999999999999998754322 122457889999988654
Q ss_pred -CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhc--------------ccc------cc---ccCCCCCchhHH
Q 019495 77 -RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------MLT------DS---CLEGQFTDDDGT 132 (340)
Q Consensus 77 -~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~--------------~~~------~~---~~~~~~~~~~~~ 132 (340)
.++.++|+||||+++|+|++|..||.............. ... .. ..........+.
T Consensus 175 ~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (283)
T cd07835 175 RQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDE 254 (283)
T ss_pred cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCH
Confidence 468899999999999999999988864322111000000 000 00 000011233457
Q ss_pred HHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 133 ELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 133 ~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.+.+++.+||+.+|.+||++.+++.
T Consensus 255 ~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 255 DGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred HHHHHHHHHhcCChhhCcCHHHHhc
Confidence 8999999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-25 Score=201.74 Aligned_cols=155 Identities=17% Similarity=0.313 Sum_probs=118.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccC-
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRT- 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~- 75 (340)
+++.....++.||+.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....++..|+|||++..
T Consensus 105 l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 183 (337)
T cd07858 105 LSDDHCQYFLYQLLRGLKYIHSAN-VLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNC 183 (337)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECcCccccccCCCcccccccccccCccChHHHhcC
Confidence 457788899999999999999999 999999999999999999999999998765433 23456889999998865
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhh-------------------hhhc----ccc---ccccCCCCCch
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD-------------------RNLQ----MLT---DSCLEGQFTDD 129 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~-------------------~~~~----~~~---~~~~~~~~~~~ 129 (340)
..++.++|+||||+++|+|++|+.||.......... .... ... .... ....+.
T Consensus 184 ~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 262 (337)
T cd07858 184 SEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSF-ARLFPH 262 (337)
T ss_pred CCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCH-HHHccc
Confidence 458899999999999999999998886432110000 0000 000 0000 011234
Q ss_pred hHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 130 DGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 130 ~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
++..+.+++.+||+.+|++|||+.+++.
T Consensus 263 ~~~~~~~li~~~l~~~P~~Rps~~ell~ 290 (337)
T cd07858 263 ANPLAIDLLEKMLVFDPSKRITVEEALA 290 (337)
T ss_pred CCHHHHHHHHHHhcCChhhccCHHHHHc
Confidence 5678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=8e-26 Score=179.23 Aligned_cols=115 Identities=17% Similarity=0.247 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC--c-cccCCcccCcccccC----C
Q 019495 4 AMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--S-YSTNLAFTPPEYLRT----G 76 (340)
Q Consensus 4 ~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~--~-~~~~~~y~aPE~~~~----~ 76 (340)
...=+|+..|+.||.|||++-++||||+||+|||++.+|+||+||||++....+.- + ..|...|||||.+.. .
T Consensus 148 ~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~ 227 (282)
T KOG0984|consen 148 DVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQK 227 (282)
T ss_pred HHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcc
Confidence 33447899999999999999779999999999999999999999999988766653 2 357889999998864 3
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccc
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 118 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~ 118 (340)
.|+.+|||||||+++.||.+++.|+..+..+...-..+..-+
T Consensus 228 gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVeep 269 (282)
T KOG0984|consen 228 GYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEP 269 (282)
T ss_pred cceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcCC
Confidence 689999999999999999999999988766655544444433
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-25 Score=204.21 Aligned_cols=154 Identities=20% Similarity=0.318 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC--cccc---CCcccCcccccCCCCCC
Q 019495 6 RLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYST---NLAFTPPEYLRTGRVTP 80 (340)
Q Consensus 6 ~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~--~~~~---~~~y~aPE~~~~~~~~~ 80 (340)
.+-++.||.+||+||..++ +|||||...|+|+.++..|||+|||+++.+..++ .+.| .+-|+|||-+....++.
T Consensus 367 LlyMAtQIsSaMeYLEkkn-FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSi 445 (1157)
T KOG4278|consen 367 LLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSI 445 (1157)
T ss_pred HHHHHHHHHHHHHHHHHhh-hhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCcccccCccccccccccc
Confidence 4568999999999999999 9999999999999999999999999999876553 2223 46799999998888999
Q ss_pred CcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHHHh
Q 019495 81 ESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 159 (340)
Q Consensus 81 ~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L 159 (340)
++|||+|||+|||+.| |..|+++.. ...+..+....++-+-|..|++.+.+||+.||+++|.+||+|.+|-..|
T Consensus 446 KSDVWAFGVLLWEIATYGMsPYPGid-----lSqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqaf 520 (1157)
T KOG4278|consen 446 KSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAF 520 (1157)
T ss_pred chhhHHHHHHHHHHHhcCCCCCCCcc-----HHHHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHH
Confidence 9999999999999998 555666532 2233344444555566888999999999999999999999999999988
Q ss_pred cccccC
Q 019495 160 SPLQKE 165 (340)
Q Consensus 160 ~~~~~~ 165 (340)
+.++..
T Consensus 521 Etmf~~ 526 (1157)
T KOG4278|consen 521 ETMFSS 526 (1157)
T ss_pred HHHhcc
Confidence 877654
|
|
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-25 Score=193.56 Aligned_cols=151 Identities=19% Similarity=0.294 Sum_probs=119.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~ 76 (340)
|++...+.++.|++.||.|||+.+ ++||||+|+||+++.++.++++|||++....... ...++..|+|||.+.++
T Consensus 98 l~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 176 (277)
T cd06917 98 IAEKYISVIIREVLVALKYIHKVG-VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEG 176 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccccccCCcceeCHHHhccC
Confidence 467889999999999999999999 9999999999999999999999999887654332 33578889999998754
Q ss_pred -CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCc-hhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 77 -RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD-DDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 77 -~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
.++.++|+||||+++|+|++|..||........... .... ....++. ..+..+.+++.+||+.||++||++.+
T Consensus 177 ~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ 251 (277)
T cd06917 177 KYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMML-IPKS----KPPRLEDNGYSKLLREFVAACLDEEPKERLSAEE 251 (277)
T ss_pred CccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhc-cccC----CCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHH
Confidence 468899999999999999999998865432211111 0110 1111222 25578999999999999999999999
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
++.
T Consensus 252 il~ 254 (277)
T cd06917 252 LLK 254 (277)
T ss_pred Hhh
Confidence 975
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-25 Score=193.27 Aligned_cols=153 Identities=24% Similarity=0.308 Sum_probs=119.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------------CccccCCccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------------KSYSTNLAFT 68 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------------~~~~~~~~y~ 68 (340)
+++..+..++.||+.||.|||+.+ ++||||+|+||+++.++.++++|||++...... ....++..|+
T Consensus 90 ~~~~~~~~i~~qi~~~L~~lH~~~-i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (265)
T cd05579 90 LDEDVARIYIAEIVLALEYLHSNG-IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYI 168 (265)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcC-eecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCcccc
Confidence 467888999999999999999999 999999999999999999999999987654322 1234677899
Q ss_pred CcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCch--hHHHHHHHHHHhhccCC
Q 019495 69 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD--DGTELVRLASRCLQYEP 146 (340)
Q Consensus 69 aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~li~~cl~~~p 146 (340)
+||.+.....+.++|+||||++++++++|..||............... .. ..+.. .+..+.+++.+||+.+|
T Consensus 169 ~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~i~~~l~~~p 242 (265)
T cd05579 169 APEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNG----KI--EWPEDVEVSDEAIDLISKLLVPDP 242 (265)
T ss_pred CHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC----Cc--CCCccccCCHHHHHHHHHHhcCCH
Confidence 999998877899999999999999999999888654433222221111 01 11222 26889999999999999
Q ss_pred CCCCCHHHHHHHhc
Q 019495 147 RERPNPKSLVTALS 160 (340)
Q Consensus 147 ~~Rps~~~i~~~L~ 160 (340)
++||++..+.+.|.
T Consensus 243 ~~Rpt~~~~~~~l~ 256 (265)
T cd05579 243 EKRLGAKSIEEIKN 256 (265)
T ss_pred hhcCCCccHHHHhc
Confidence 99999955555443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.2e-25 Score=192.29 Aligned_cols=151 Identities=19% Similarity=0.296 Sum_probs=120.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCC-eEEeccCCCccCCCCC----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN-PRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~-~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~ 75 (340)
+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++. ++++|||.+....... ...+++.|+|||++.+
T Consensus 98 ~~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~ 176 (257)
T cd08225 98 FSEDQILSWFVQISLGLKHIHDRK-ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQN 176 (257)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEcCCCCeEEecccccchhccCCcccccccCCCccccCHHHHcC
Confidence 467889999999999999999999 999999999999998764 6999999887654432 2347888999999988
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i 155 (340)
..++.++|+||||++++++++|..|+............... . ....+...+..+.+++.+||..+|++|||+.++
T Consensus 177 ~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l 251 (257)
T cd08225 177 RPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQG----Y-FAPISPNFSRDLRSLISQLFKVSPRDRPSITSI 251 (257)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc----c-CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHH
Confidence 88899999999999999999999888654333222222111 1 112334456789999999999999999999999
Q ss_pred HH
Q 019495 156 VT 157 (340)
Q Consensus 156 ~~ 157 (340)
+.
T Consensus 252 l~ 253 (257)
T cd08225 252 LK 253 (257)
T ss_pred hh
Confidence 75
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-25 Score=199.96 Aligned_cols=156 Identities=23% Similarity=0.314 Sum_probs=114.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC----C-------CccccCCcccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----G-------KSYSTNLAFTP 69 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----~-------~~~~~~~~y~a 69 (340)
+++.....++.||+.||.|||+++ ++||||||+||+++.++.++++||+....... . ....++..|++
T Consensus 98 ~~~~~~~~~~~qi~~aL~~lH~~~-ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~a 176 (328)
T cd08226 98 MSEALIGNILFGALRGLNYLHQNG-YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLS 176 (328)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccC
Confidence 356677789999999999999999 99999999999999999999999975432111 0 01123567999
Q ss_pred cccccCC--CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhc--------------------------------
Q 019495 70 PEYLRTG--RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-------------------------------- 115 (340)
Q Consensus 70 PE~~~~~--~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~-------------------------------- 115 (340)
||++.+. .++.++|||||||++|+|++|..||..............
T Consensus 177 PE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (328)
T cd08226 177 PELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGE 256 (328)
T ss_pred hhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhccccc
Confidence 9999763 478899999999999999999998865422111100000
Q ss_pred ---------cccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 116 ---------MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 116 ---------~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
...........+..++..+.+++++||+.||++|||+.+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 257 SVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred chhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 000001111123346678999999999999999999999974
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.2e-25 Score=197.11 Aligned_cols=149 Identities=22% Similarity=0.370 Sum_probs=123.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEe-cCCCCeEEeccCCCccCCCCC---ccccCCcccCcccccCCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF-DEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill-~~~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~~~ 77 (340)
.+.-.-+++.||+.|+.|+|... ||||||||+||++ .+-|.|||.|||++-...++. +.+|++.|.|||.+.+..
T Consensus 116 ~E~La~kYF~QI~~AI~YCHqLH-VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDs 194 (864)
T KOG4717|consen 116 NEDLAKKYFAQIVHAISYCHQLH-VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDS 194 (864)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhh-hhcccCCcceeEEeeecCceEeeeccccccCCCcchhhcccchhhccCchhhhcCc
Confidence 34556689999999999999998 9999999999987 567899999999998777664 678999999999999877
Q ss_pred CC-CCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 78 VT-PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 78 ~~-~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
|+ ++.||||||||||-|++|+.||........ +..+.+. .-..|...+.++.+||..||..||.+|.+.++|.
T Consensus 195 YDAPAVDiWSLGVILyMLVCGq~PFqeANDSET----LTmImDC--KYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~ 268 (864)
T KOG4717|consen 195 YDAPAVDIWSLGVILYMLVCGQPPFQEANDSET----LTMIMDC--KYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIV 268 (864)
T ss_pred cCCcchhhhHHHHHHHHHHhCCCccccccchhh----hhhhhcc--cccCchhhhHHHHHHHHHHHhcCchhhccHHHHh
Confidence 75 578999999999999999998865332222 2222222 2246777889999999999999999999999997
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 269 s 269 (864)
T KOG4717|consen 269 S 269 (864)
T ss_pred c
Confidence 4
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-25 Score=192.44 Aligned_cols=149 Identities=18% Similarity=0.315 Sum_probs=124.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
|++.+.-++++||++|+.|+|.++ ++|||||.+|||+|.++++||+|||++....+. ++++|++.|.+||.+.+.+
T Consensus 150 LsErEaRhfFRQIvSAVhYCHknr-VvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~P 228 (668)
T KOG0611|consen 150 LSEREARHFFRQIVSAVHYCHKNR-VVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTP 228 (668)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhcc-ceecccchhheeecCCCCeeeeccchhhhhccccHHHHhcCCcccCCccccCCCC
Confidence 577888999999999999999999 999999999999999999999999998877665 4789999999999999887
Q ss_pred C-CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 78 V-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 78 ~-~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
| ++..|.|||||+||.|+.|..||.+.....+.. .+...... .+..++...-||++||..+|++|.|+.+|.
T Consensus 229 Y~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvr----QIs~GaYr---EP~~PSdA~gLIRwmLmVNP~RRATieDiA 301 (668)
T KOG0611|consen 229 YKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVR----QISRGAYR---EPETPSDASGLIRWMLMVNPERRATIEDIA 301 (668)
T ss_pred CCCCccchhhHHHHHHHHhhcccccCCchHHHHHH----Hhhccccc---CCCCCchHHHHHHHHHhcCcccchhHHHHh
Confidence 6 678999999999999999999998754333222 22211111 122346788899999999999999999987
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 302 s 302 (668)
T KOG0611|consen 302 S 302 (668)
T ss_pred h
Confidence 5
|
|
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.2e-25 Score=196.77 Aligned_cols=163 Identities=20% Similarity=0.224 Sum_probs=120.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccC-
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRT- 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~- 75 (340)
+++..+..++.||++||.|||+++ ++|+||+|+||+++.++.++|+|||+++...... ...+++.|+|||.+.+
T Consensus 99 ~~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 177 (298)
T cd07841 99 LTPADIKSYMLMTLRGLEYLHSNW-ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGA 177 (298)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeecCCChhhEEEcCCCCEEEccceeeeeccCCCccccccccceeeeCHHHHhCC
Confidence 468889999999999999999999 9999999999999999999999999987654332 2235678999999865
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccc--------------ccc---cC-----CCCCchhHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT--------------DSC---LE-----GQFTDDDGTE 133 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~--------------~~~---~~-----~~~~~~~~~~ 133 (340)
..++.++|+|||||++|+|++|.++|...............+. ... .. .......+..
T Consensus 178 ~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (298)
T cd07841 178 RHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDD 257 (298)
T ss_pred CCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHH
Confidence 4578899999999999999999766654322111111100000 000 00 0011234578
Q ss_pred HHHHHHHhhccCCCCCCCHHHHHHHhcccccCC
Q 019495 134 LVRLASRCLQYEPRERPNPKSLVTALSPLQKET 166 (340)
Q Consensus 134 l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~ 166 (340)
+.+++.+||+.+|++|||+.+++. ..+....
T Consensus 258 ~~~li~~~l~~~P~~R~s~~e~l~--~~~~~~~ 288 (298)
T cd07841 258 ALDLLQRLLTLNPNKRITARQALE--HPYFSND 288 (298)
T ss_pred HHHHHHHHhcCCcccCcCHHHHhh--CccccCC
Confidence 999999999999999999999986 4444443
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.9e-25 Score=195.75 Aligned_cols=156 Identities=21% Similarity=0.357 Sum_probs=119.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhC-CCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~-~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.....++.+++.||.|||+. + ++||||+|+||+++.++.++|+|||++...... ....++..|++||++.++.
T Consensus 100 ~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE~~~~~~ 178 (284)
T cd06620 100 IPVEILGKIAVAVVEGLTYLYNVHR-IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGTSTYMSPERIQGGK 178 (284)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcC-eeccCCCHHHEEECCCCcEEEccCCcccchhhhccCccccCcccCCHHHHccCC
Confidence 46778889999999999999974 6 999999999999999999999999987654322 2346789999999998888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHH----Hhh---hhhccccccccCCCCCc-hhHHHHHHHHHHhhccCCCCC
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDL----IRD---RNLQMLTDSCLEGQFTD-DDGTELVRLASRCLQYEPRER 149 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~-~~~~~l~~li~~cl~~~p~~R 149 (340)
++.++|+|||||++|++++|+.||....... ... .......... ...++. .++..+.+++.+||+.||++|
T Consensus 179 ~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~R 257 (284)
T cd06620 179 YTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP-PPRLPSSDFPEDLRDFVDACLLKDPTER 257 (284)
T ss_pred CCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc-CCCCCchhcCHHHHHHHHHHhcCCcccC
Confidence 8999999999999999999999886533210 000 0011111100 111222 256789999999999999999
Q ss_pred CCHHHHHHH
Q 019495 150 PNPKSLVTA 158 (340)
Q Consensus 150 ps~~~i~~~ 158 (340)
|++.+++..
T Consensus 258 pt~~e~~~~ 266 (284)
T cd06620 258 PTPQQLCAM 266 (284)
T ss_pred cCHHHHhcC
Confidence 999999864
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.4e-25 Score=196.08 Aligned_cols=153 Identities=22% Similarity=0.279 Sum_probs=119.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.|++.||.|||+.+ ++||||+|+||+++.++.++++|||++...... ....++..|++||++.+.
T Consensus 113 ~~~~~~~~~~~ql~~~l~~lH~~g-ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~ 191 (292)
T cd06657 113 MNEEQIAAVCLAVLKALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRL 191 (292)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCccccCHHHhcCC
Confidence 467788899999999999999999 999999999999999999999999987654332 224578899999999877
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++|+||||+++|+|++|..|+................ +..+ ......+..+.+++.+||+.+|.+||++.+++
T Consensus 192 ~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll 268 (292)
T cd06657 192 PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-PPKL--KNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 268 (292)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhC-Cccc--CCcccCCHHHHHHHHHHHhCCcccCcCHHHHh
Confidence 88999999999999999999998876543221111111111 1111 11223457899999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 269 ~ 269 (292)
T cd06657 269 K 269 (292)
T ss_pred c
Confidence 6
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-25 Score=214.82 Aligned_cols=146 Identities=22% Similarity=0.374 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCC----------------------CCCccc
Q 019495 5 MRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----------------------DGKSYS 62 (340)
Q Consensus 5 ~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~----------------------~~~~~~ 62 (340)
...++++||++||.|+|++| ||||||||.||+++.++.|||.|||++.... +.+..+
T Consensus 698 ~~wrLFreIlEGLaYIH~~g-iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~V 776 (1351)
T KOG1035|consen 698 EAWRLFREILEGLAYIHDQG-IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQV 776 (1351)
T ss_pred HHHHHHHHHHHHHHHHHhCc-eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCccccccc
Confidence 45688999999999999999 9999999999999999999999999987611 123457
Q ss_pred cCCcccCcccccCC---CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccC--CCCCchhHHHHHHH
Q 019495 63 TNLAFTPPEYLRTG---RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE--GQFTDDDGTELVRL 137 (340)
Q Consensus 63 ~~~~y~aPE~~~~~---~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~l 137 (340)
||..|+|||++.+. +|+.|.|+||+|||++||+.- |....-. ...+..+.+..++ ..+..+..+.-.++
T Consensus 777 GTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yP---F~TsMER---a~iL~~LR~g~iP~~~~f~~~~~~~e~sl 850 (1351)
T KOG1035|consen 777 GTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYP---FGTSMER---ASILTNLRKGSIPEPADFFDPEHPEEASL 850 (1351)
T ss_pred ceeeeecHHHhcccccccccchhhhHHHHHHHHHHhcc---CCchHHH---HHHHHhcccCCCCCCcccccccchHHHHH
Confidence 89999999999874 499999999999999999853 4322111 1112222222222 22334444667889
Q ss_pred HHHhhccCCCCCCCHHHHHH
Q 019495 138 ASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 138 i~~cl~~~p~~Rps~~~i~~ 157 (340)
|+++++.||.+|||+.+++.
T Consensus 851 I~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 851 IRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHHHhcCCCccCCCHHHHhh
Confidence 99999999999999999985
|
|
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.6e-25 Score=193.64 Aligned_cols=156 Identities=16% Similarity=0.273 Sum_probs=117.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccC-C
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRT-G 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~-~ 76 (340)
++|.+++.++.|++.+|.|||+++ ++|+||+|.||+++.++.++|+|||++...... ....++..|+|||++.+ .
T Consensus 96 ~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~ 174 (283)
T cd07830 96 FSESVIRSIIYQILQGLAHIHKHG-FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRST 174 (283)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCCCcccccCceeeecCc
Confidence 478889999999999999999999 999999999999999999999999998765433 23456888999998854 4
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcc---------------------ccccccC---CCCCchhHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM---------------------LTDSCLE---GQFTDDDGT 132 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~---~~~~~~~~~ 132 (340)
.++.++|+||||+++++|++|+.||+.............. ..+.... .......+.
T Consensus 175 ~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (283)
T cd07830 175 SYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASP 254 (283)
T ss_pred CcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCH
Confidence 5789999999999999999999888654322111100000 0000000 001112247
Q ss_pred HHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 133 ELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 133 ~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.+.+++++||+.+|++||++.+++.
T Consensus 255 ~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 255 EAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred HHHHHHHHhcccCcccCCCHHHHhh
Confidence 7999999999999999999999874
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.2e-25 Score=192.97 Aligned_cols=151 Identities=18% Similarity=0.328 Sum_probs=121.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHh-CCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~-~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~ 75 (340)
+++..+..++.|+++||.|||+ .+ ++||||+|+||+++.++.++|+|||.+....... ...++..|++||.+.+
T Consensus 96 l~~~~~~~~~~~l~~~l~~lh~~~~-~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~ 174 (264)
T cd06623 96 IPEPVLAYIARQILKGLDYLHTKRH-IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQG 174 (264)
T ss_pred CCHHHHHHHHHHHHHHHHHHhccCC-CccCCCCHHHEEECCCCCEEEccCccceecccCCCcccceeecccccCHhhhCC
Confidence 4677889999999999999999 99 9999999999999999999999999887654332 2356788999999988
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcch---hHHHhhhhhccccccccCCCCCch-hHHHHHHHHHHhhccCCCCCCC
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHA---LDLIRDRNLQMLTDSCLEGQFTDD-DGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~~p~~Rps 151 (340)
..++.++|+||||+++|+|++|..|+.... ......... . ......+.. ++..+.+++.+||..+|+.||+
T Consensus 175 ~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~ 249 (264)
T cd06623 175 ESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC----D-GPPPSLPAEEFSPEFRDFISACLQKDPKKRPS 249 (264)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh----c-CCCCCCCcccCCHHHHHHHHHHccCChhhCCC
Confidence 888999999999999999999998875542 111111111 1 111123333 5688999999999999999999
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.+++.
T Consensus 250 ~~~ll~ 255 (264)
T cd06623 250 AAELLQ 255 (264)
T ss_pred HHHHHh
Confidence 999986
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.5e-25 Score=193.32 Aligned_cols=155 Identities=19% Similarity=0.319 Sum_probs=119.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC-CeEEeccCCCccCCCC--------CccccCCcccCcc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDG--------KSYSTNLAFTPPE 71 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~-~~kl~dfg~~~~~~~~--------~~~~~~~~y~aPE 71 (340)
+++.....++.||+.||.|||+++ ++|+||+|+||+++.++ .++|+|||.+...... ....++..|++||
T Consensus 100 ~~~~~~~~~~~ql~~al~~LH~~~-i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE 178 (268)
T cd06630 100 FKEAVIINYTEQLLRGLSYLHENQ-IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPE 178 (268)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHh
Confidence 467788899999999999999999 99999999999998776 5999999998665432 1234678999999
Q ss_pred cccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 72 YLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 72 ~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
++.+..++.++|+||+|+++++|++|..||.......... ..............+...++.+.+++.+||..+|++||+
T Consensus 179 ~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~ 257 (268)
T cd06630 179 VLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLA-LIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPP 257 (268)
T ss_pred HhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHH-HHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcC
Confidence 9988888999999999999999999998875432111100 111111111123345556788999999999999999999
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.+++.
T Consensus 258 ~~~ll~ 263 (268)
T cd06630 258 SRELLK 263 (268)
T ss_pred HHHHhc
Confidence 999874
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.2e-25 Score=192.61 Aligned_cols=152 Identities=22% Similarity=0.276 Sum_probs=120.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.....++.||+.||.|||+++ ++|+||+|+||+++.++.++++|||.+...... ....++..|++||++.+..
T Consensus 97 l~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~ 175 (258)
T cd05578 97 FSEEQVKFWICEIVLALEYLHSKG-IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQG 175 (258)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEEcCCCCEEEeecccccccCCCccccccCCChhhcCHHHHcccC
Confidence 456788899999999999999999 999999999999999999999999988765443 2345678899999998878
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH--HHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP--KSL 155 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~--~~i 155 (340)
++.++|+||||+++|+|++|..|+........ ......... .....+...+..+.+++.+||+.||.+||++ +++
T Consensus 176 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l 252 (258)
T cd05578 176 YSVAVDWWSLGVTAYECLRGKRPYRGHSRTIR-DQIRAKQET--ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDL 252 (258)
T ss_pred CCCcccchhhHHHHHHHHhCCCCCCCCCccHH-HHHHHHhcc--ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHH
Confidence 89999999999999999999998875542100 010111110 1223455567899999999999999999999 665
Q ss_pred H
Q 019495 156 V 156 (340)
Q Consensus 156 ~ 156 (340)
+
T Consensus 253 ~ 253 (258)
T cd05578 253 K 253 (258)
T ss_pred h
Confidence 4
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.5e-25 Score=197.57 Aligned_cols=162 Identities=22% Similarity=0.294 Sum_probs=120.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccC-
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRT- 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~- 75 (340)
+++.++..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++....... ...++..|+|||++.+
T Consensus 105 l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 183 (309)
T cd07845 105 FSESQVKCLMLQLLRGLQYLHENF-IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGC 183 (309)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccceeeecCCccCCCCcccccccccChhhhcCC
Confidence 467888999999999999999999 9999999999999999999999999987654331 1234678999999875
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccc--c---------------ccCCC-C------CchhH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD--S---------------CLEGQ-F------TDDDG 131 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~--~---------------~~~~~-~------~~~~~ 131 (340)
..++.++|+||||+++|+|++|..||.................. . ..... . ....+
T Consensus 184 ~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (309)
T cd07845 184 TTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLS 263 (309)
T ss_pred CCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccC
Confidence 45789999999999999999999888654322211111100000 0 00000 0 01135
Q ss_pred HHHHHHHHHhhccCCCCCCCHHHHHHHhcccccC
Q 019495 132 TELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 165 (340)
Q Consensus 132 ~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 165 (340)
+.+.++|.+|++.||++|||+.+++. +++...
T Consensus 264 ~~~~~li~~ml~~dp~~R~t~~~il~--h~~f~~ 295 (309)
T cd07845 264 EAGLRLLNFLLMYDPKKRATAEEALE--SSYFKE 295 (309)
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHhc--Chhhcc
Confidence 77889999999999999999999985 444443
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.92 E-value=7e-25 Score=189.97 Aligned_cols=151 Identities=17% Similarity=0.218 Sum_probs=122.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC--ccccCCcccCcccccCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAFTPPEYLRTGRV 78 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~--~~~~~~~y~aPE~~~~~~~ 78 (340)
+++.....++.|++.||.|||+.+ ++|+||+|.||+++.++.+|++|||++....... ...++..|++||.+.+..+
T Consensus 100 ~~~~~~~~~~~~l~~al~~lh~~~-i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~ 178 (256)
T cd08530 100 IPEQEIWRIFIQLLRGLQALHEQK-ILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPY 178 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEEecCCcEEEeeccchhhhccCCcccccCCccccCHHHHCCCCC
Confidence 356778899999999999999999 9999999999999999999999999887654432 2356789999999988888
Q ss_pred CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 79 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 79 ~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+.++|+||||+++++|++|+.|+............... ..+..+...+..+.+++.+||+.+|++||++.+++.
T Consensus 179 ~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 179 SYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRG-----KYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-----CCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 99999999999999999999888655433222221111 122334456688999999999999999999999975
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-25 Score=191.03 Aligned_cols=153 Identities=22% Similarity=0.342 Sum_probs=122.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
++|..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+....... ...++..|++||.+.
T Consensus 98 ~~~~~~~~~~~~l~~~l~~lh~~~-~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~ 176 (260)
T cd06606 98 LPEPVIRKYTRQILEGLAYLHSNG-IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIR 176 (260)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhc
Confidence 468889999999999999999999 9999999999999999999999999887654432 345678999999998
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+...+.++|+||||+++++|++|..|+........ ....+........++...+..+.+++.+|++.+|++||++.+
T Consensus 177 ~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ 253 (260)
T cd06606 177 GEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMA---ALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADE 253 (260)
T ss_pred CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH---HHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHH
Confidence 88889999999999999999999988865431111 111111111222345555789999999999999999999999
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
++.
T Consensus 254 ll~ 256 (260)
T cd06606 254 LLQ 256 (260)
T ss_pred Hhh
Confidence 874
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.9e-25 Score=200.29 Aligned_cols=156 Identities=19% Similarity=0.309 Sum_probs=117.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC--------ccccCCcccCccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--------SYSTNLAFTPPEY 72 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~--------~~~~~~~y~aPE~ 72 (340)
+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++....... ...++..|++||.
T Consensus 104 ~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~ 182 (334)
T cd07855 104 LTEEHIRYFLYQLLRGLKYIHSAN-VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPEL 182 (334)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHH
Confidence 467888999999999999999999 9999999999999999999999999987543221 2356788999999
Q ss_pred ccC-CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhh-------------------hhhcccccc-ccCCC-----C
Q 019495 73 LRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD-------------------RNLQMLTDS-CLEGQ-----F 126 (340)
Q Consensus 73 ~~~-~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~-------------------~~~~~~~~~-~~~~~-----~ 126 (340)
+.+ ..++.++|+||||+++|+|++|+.||.......... ......... ..... .
T Consensus 183 ~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (334)
T cd07855 183 LLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKI 262 (334)
T ss_pred hcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHH
Confidence 865 457899999999999999999999886542211000 000000000 00000 1
Q ss_pred CchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 127 TDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 127 ~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
....+..+.+++.+||+.+|++||++.+++.
T Consensus 263 ~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 263 FPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1234678999999999999999999999885
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.3e-25 Score=194.73 Aligned_cols=155 Identities=19% Similarity=0.235 Sum_probs=113.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC-
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG- 76 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~- 76 (340)
++.....++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||+++..... ....+++.|+|||++.+.
T Consensus 101 ~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 179 (291)
T cd07870 101 HPYNVRLFMFQLLRGLAYIHGQH-ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGAT 179 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCCccccccccCCceeecCC
Confidence 56677889999999999999999 999999999999999999999999988754322 223468899999998753
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHH--Hhhh----------------hhccccccccCCCCC---------ch
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDL--IRDR----------------NLQMLTDSCLEGQFT---------DD 129 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~--~~~~----------------~~~~~~~~~~~~~~~---------~~ 129 (340)
.++.++|+||||+++|+|++|..||....... +... ..............+ ..
T Consensus 180 ~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (291)
T cd07870 180 DYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLS 259 (291)
T ss_pred CCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccC
Confidence 47889999999999999999998875432110 0000 000000000000000 01
Q ss_pred hHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 130 DGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 130 ~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.+..+.+++.+|++.||.+|||+.+++.
T Consensus 260 ~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 260 RPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred CChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 2467899999999999999999999874
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.4e-26 Score=219.64 Aligned_cols=146 Identities=18% Similarity=0.279 Sum_probs=116.9
Q ss_pred HHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC--------ccccCCcccCcccccCC---
Q 019495 8 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--------SYSTNLAFTPPEYLRTG--- 76 (340)
Q Consensus 8 ~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~--------~~~~~~~y~aPE~~~~~--- 76 (340)
.+-.|++.|+.|||+.| ||||||||.||+++.+|.+|+.|||.++...... ...||+.|||||++.+.
T Consensus 1338 vyt~qll~gla~LH~~g-IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~k 1416 (1509)
T KOG4645|consen 1338 VYTKQLLEGLAYLHEHG-IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGK 1416 (1509)
T ss_pred HHHHHHHHHHHHHHhcC-ceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccC
Confidence 46789999999999999 9999999999999999999999999998665442 34689999999999863
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.-..++||||+|||+.||+||+.|+......+ ...-.+. ..-.+.+|...+++..+++.+|+..||++|.++.+++
T Consensus 1417 G~~~A~DiWslGCVVlEM~tGkrPW~~~dne~---aIMy~V~-~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qll 1492 (1509)
T KOG4645|consen 1417 GHGGAADIWSLGCVVLEMATGKRPWAELDNEW---AIMYHVA-AGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLL 1492 (1509)
T ss_pred CCCcchhhhcccceEEEeecCCCchhhccchh---HHHhHHh-ccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHH
Confidence 24568999999999999999999875432111 0111111 1123456777889999999999999999999999887
Q ss_pred HH
Q 019495 157 TA 158 (340)
Q Consensus 157 ~~ 158 (340)
+.
T Consensus 1493 e~ 1494 (1509)
T KOG4645|consen 1493 EH 1494 (1509)
T ss_pred Hh
Confidence 63
|
|
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.6e-25 Score=189.85 Aligned_cols=151 Identities=23% Similarity=0.319 Sum_probs=122.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc----cccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS----YSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~----~~~~~~y~aPE~~~~~ 76 (340)
+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||.+........ ..++..|++||.+.+.
T Consensus 96 l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~ 174 (254)
T cd06627 96 FPESLVAVYVYQVLQGLAYLHEQG-VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMS 174 (254)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEECCCCCEEEeccccceecCCCcccccccccchhhcCHhhhcCC
Confidence 477888999999999999999999 99999999999999999999999999876554432 3567889999999877
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++|+||+|+++++|++|..|+.............. .....++...+..+.+++.+||..+|++||++.+++
T Consensus 175 ~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l 249 (254)
T cd06627 175 GASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQ-----DDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLL 249 (254)
T ss_pred CCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc-----cCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHh
Confidence 788999999999999999999988765332111111111 112234555678899999999999999999999987
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 250 ~ 250 (254)
T cd06627 250 K 250 (254)
T ss_pred c
Confidence 4
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-25 Score=204.20 Aligned_cols=148 Identities=17% Similarity=0.267 Sum_probs=121.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCccc-------cCCcccCcccccCCC
Q 019495 5 MRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS-------TNLAFTPPEYLRTGR 77 (340)
Q Consensus 5 ~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~-------~~~~y~aPE~~~~~~ 77 (340)
....++.||+.||.||.+++ +|||||...|+++...-.|||||||+.+..+....+. -...|+|||.++..+
T Consensus 213 ~Lcdya~QiA~aM~YLeskr-lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~k 291 (1039)
T KOG0199|consen 213 RLCDYAMQIAKAMQYLESKR-LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRK 291 (1039)
T ss_pred HHHHHHHHHHHHHHHHhhhh-hhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhcccc
Confidence 45679999999999999999 9999999999999988899999999999877654332 246799999999999
Q ss_pred CCCCcceehHHHHHHHHhhCC-CCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGK-HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
++.+||+|+|||++|||+|++ .|+.+.... .+...++..-..+.|+.|+..+.++++.||..+|++||+|..|+
T Consensus 292 FShaSDvWmyGVTiWEMFtyGEePW~G~~g~-----qIL~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair 366 (1039)
T KOG0199|consen 292 FSHASDVWMYGVTIWEMFTYGEEPWVGCRGI-----QILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIR 366 (1039)
T ss_pred ccccchhhhhhhhHHhhhccCCCCCCCCCHH-----HHHHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHH
Confidence 999999999999999999965 455443221 12222333344456888999999999999999999999999997
Q ss_pred HH
Q 019495 157 TA 158 (340)
Q Consensus 157 ~~ 158 (340)
+.
T Consensus 367 ~~ 368 (1039)
T KOG0199|consen 367 ED 368 (1039)
T ss_pred Hh
Confidence 43
|
|
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.9e-25 Score=194.84 Aligned_cols=156 Identities=23% Similarity=0.338 Sum_probs=117.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
+++.....++.||+.||.|||+.+ ++|+||+|+||+++.++.++++|||++....... ...++..|++||.+.+
T Consensus 97 ~~~~~~~~i~~~i~~al~~LH~~~-~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~ 175 (287)
T cd07840 97 FTESQIKCYMKQLLEGLQYLHSNG-ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLG 175 (287)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccccccccccCCceeeEc
Confidence 467788999999999999999999 9999999999999999999999999987654432 2245778999998765
Q ss_pred -CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccc-------------------------ccCCCCCch
Q 019495 76 -GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS-------------------------CLEGQFTDD 129 (340)
Q Consensus 76 -~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~ 129 (340)
..++.++||||||+++|+|++|..||..................+ .+...+...
T Consensus 176 ~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (287)
T cd07840 176 ATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHL 255 (287)
T ss_pred cccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhccc
Confidence 357889999999999999999998876543222111111100000 000001111
Q ss_pred hHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 130 DGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 130 ~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
++..+.+++.+||+.+|.+||++.+++.
T Consensus 256 ~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 256 IDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 3678999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.9e-25 Score=194.19 Aligned_cols=151 Identities=19% Similarity=0.285 Sum_probs=116.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC---ccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~~~ 77 (340)
+++.....++.|++.||.|||+.+ ++||||+|+||+++.++.++++|||.+....... ...++..|++||++.++.
T Consensus 92 ~~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~ 170 (277)
T cd05577 92 FPEARAIFYAAQIICGLEHLHQRR-IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEV 170 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCCcCCHHHhcCCC
Confidence 467788889999999999999999 9999999999999999999999999887654322 234678899999998878
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
++.++|+||||+++++|++|+.||................. ......+...+..+.+++.+||+.+|.+||++++
T Consensus 171 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 171 YDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTL--EMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred CCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccc--cccccCCccCCHHHHHHHHHHccCChhHccCCCc
Confidence 89999999999999999999988854322111111111111 0122344456788999999999999999994444
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.2e-25 Score=195.30 Aligned_cols=155 Identities=19% Similarity=0.323 Sum_probs=113.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccC-
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRT- 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~- 75 (340)
+++.....++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....++..|+|||++.+
T Consensus 100 ~~~~~~~~~~~ql~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~ 178 (291)
T cd07844 100 LSMHNVRLFLFQLLRGLAYCHQRR-VLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGS 178 (291)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eecccCCHHHEEEcCCCCEEECccccccccCCCCccccccccccccCCcHHhhcC
Confidence 356778889999999999999999 999999999999999999999999987653321 12245778999999875
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhH-HHhhhhhc-----------ccc--------------ccccCCCCCch
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQ-----------MLT--------------DSCLEGQFTDD 129 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~-~~~~~~~~-----------~~~--------------~~~~~~~~~~~ 129 (340)
..++.++|+||+|+++|+|++|..||...... ........ ... ....... ...
T Consensus 179 ~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 257 (291)
T cd07844 179 TEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINH-APR 257 (291)
T ss_pred cccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHh-CcC
Confidence 45788999999999999999999888543210 00000000 000 0000000 011
Q ss_pred hH--HHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 130 DG--TELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 130 ~~--~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.. ..+.+++.+|++.+|++||++.+++.
T Consensus 258 ~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 258 LDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred CCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 22 67889999999999999999999874
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.1e-25 Score=198.23 Aligned_cols=156 Identities=17% Similarity=0.250 Sum_probs=118.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-ccccCCcccCcccccC-CCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-SYSTNLAFTPPEYLRT-GRV 78 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-~~~~~~~y~aPE~~~~-~~~ 78 (340)
+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.++|+|||+++...... ...++..|+|||++.+ ..+
T Consensus 117 l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 195 (345)
T cd07877 117 LTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHY 195 (345)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEcCCCCEEEecccccccccccccccccCCCccCHHHHhCccCC
Confidence 467788899999999999999999 9999999999999999999999999987654432 3467889999999876 467
Q ss_pred CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhh-----------cccc-----------ccccC---CCCCchhHHH
Q 019495 79 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL-----------QMLT-----------DSCLE---GQFTDDDGTE 133 (340)
Q Consensus 79 ~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~-----------~~~~-----------~~~~~---~~~~~~~~~~ 133 (340)
+.++|+||||+++|+|++|+.||............. ..+. +.... .......++.
T Consensus 196 ~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (345)
T cd07877 196 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 275 (345)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHH
Confidence 889999999999999999998886432211100000 0000 00000 0011124567
Q ss_pred HHHHHHHhhccCCCCCCCHHHHHH
Q 019495 134 LVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 134 l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+.+++.+|++.||.+||++.+++.
T Consensus 276 ~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 276 AVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred HHHHHHHHcCCChhhcCCHHHHhc
Confidence 899999999999999999999985
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.5e-25 Score=190.13 Aligned_cols=151 Identities=24% Similarity=0.286 Sum_probs=123.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.+++.||.|||+.+ ++|+||+|+||+++.++.++++|||++....... ...+++.|++||.+.+.
T Consensus 100 ~~~~~~~~i~~~i~~~l~~lh~~~-~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~ 178 (258)
T cd08215 100 FPEEQILDWFVQLCLALKYLHSRK-ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNK 178 (258)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHHeEEcCCCcEEECCccceeecccCcceecceeeeecccChhHhccC
Confidence 467788999999999999999999 9999999999999999999999999987654432 23567889999999888
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++|+||+|+++++|++|..|+.......+........ ....+...+..+.+++.+||+.+|++||++.+++
T Consensus 179 ~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll 253 (258)
T cd08215 179 PYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQ-----YPPIPSQYSSELRNLVSSLLQKDPEERPSIAQIL 253 (258)
T ss_pred CCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCC-----CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 88999999999999999999998876543333222222111 2233445668899999999999999999999987
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 254 ~ 254 (258)
T cd08215 254 Q 254 (258)
T ss_pred c
Confidence 5
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.2e-25 Score=195.87 Aligned_cols=155 Identities=19% Similarity=0.282 Sum_probs=114.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC--------ccccCCcccCccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--------SYSTNLAFTPPEY 72 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~--------~~~~~~~y~aPE~ 72 (340)
+++.+...++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++....... ...++..|+|||+
T Consensus 116 ~~~~~~~~i~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 194 (310)
T cd07865 116 FTLSEIKKVMKMLLNGLYYIHRNK-ILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPEL 194 (310)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHH
Confidence 467888999999999999999999 9999999999999999999999999987543221 2245678999998
Q ss_pred ccCC-CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccc----ccc------------------c----cCCC
Q 019495 73 LRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML----TDS------------------C----LEGQ 125 (340)
Q Consensus 73 ~~~~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~----~~~------------------~----~~~~ 125 (340)
+.+. .++.++|+||||+++|+|++|..|+........... +..+ .+. . ....
T Consensus 195 ~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (310)
T cd07865 195 LLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTL-ISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKER 273 (310)
T ss_pred hcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHHhCCCChhhcccccchhhhhhccCCCccchhhHHh
Confidence 8764 368899999999999999999988755422111000 0000 000 0 0000
Q ss_pred C-CchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 126 F-TDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 126 ~-~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
. +...+..+.++|.+||..||.+|||+.+++.
T Consensus 274 l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 274 LKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred cccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 0 1112356789999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.9e-25 Score=197.26 Aligned_cols=156 Identities=19% Similarity=0.248 Sum_probs=115.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC---------------ccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---------------SYSTNL 65 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~ 65 (340)
+++.+...++.||++||.|||+++ ++||||||+||+++.++.++++|||+++...... ...+++
T Consensus 112 ~~~~~~~~i~~~l~~al~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (311)
T cd07866 112 LTESQIKCYMLQLLEGINYLHENH-ILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTR 190 (311)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceecc
Confidence 467888999999999999999999 9999999999999999999999999887543221 123467
Q ss_pred cccCcccccCC-CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhc-----------------cccccccCCCCC
Q 019495 66 AFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------------MLTDSCLEGQFT 127 (340)
Q Consensus 66 ~y~aPE~~~~~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~ 127 (340)
.|+|||++.+. .++.++||||||+++|+|++|++||.+............ ...........+
T Consensus 191 ~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (311)
T cd07866 191 WYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYP 270 (311)
T ss_pred CcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCC
Confidence 89999988654 578899999999999999999988765332211111000 000000000011
Q ss_pred -------chhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 128 -------DDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 128 -------~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
......+.+++.+||+.||.+|||+.+++.
T Consensus 271 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 271 RTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred ccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 122367889999999999999999999874
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=191.50 Aligned_cols=156 Identities=23% Similarity=0.307 Sum_probs=118.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~ 76 (340)
+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||.+....... ....+..|+|||.+.+.
T Consensus 95 ~~~~~~~~~~~~i~~~l~~LH~~~-i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~ 173 (282)
T cd07829 95 LSPNLIKSIMYQLLRGLAYCHSHR-ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGS 173 (282)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChheEEEcCCCCEEEecCCcccccCCCccccCccccCcCcCChHHhcCC
Confidence 467888999999999999999999 9999999999999999999999999887654332 23346789999998766
Q ss_pred -CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhc--------------------cccccccCC---CCCchhHH
Q 019495 77 -RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------------MLTDSCLEG---QFTDDDGT 132 (340)
Q Consensus 77 -~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~---~~~~~~~~ 132 (340)
.++.++|+||||++++|+++|+.||.............. ...+..... ...+..+.
T Consensus 174 ~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (282)
T cd07829 174 KHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDP 253 (282)
T ss_pred cCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccH
Confidence 789999999999999999999888865432211111000 000000000 00112357
Q ss_pred HHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 133 ELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 133 ~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.+.+++.+||..+|++||++.+++.
T Consensus 254 ~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 254 EGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred HHHHHHHHhhccCcccCCCHHHHhh
Confidence 8999999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=5e-25 Score=194.58 Aligned_cols=159 Identities=19% Similarity=0.277 Sum_probs=120.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
+++.....++.|++.||.|||+.+ ++||||+|.||+++.++.++++|||+++...... ...++..|++||.+.+
T Consensus 102 ~~~~~~~~~~~ql~~~l~~lH~~~-~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 180 (288)
T cd05583 102 FTESEVRVYIAEIVLALDHLHQLG-IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRG 180 (288)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEEECccccccccccccccccccCCccccCHHHhcC
Confidence 356778889999999999999999 9999999999999999999999999887543322 2356889999999876
Q ss_pred CC--CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 76 GR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 76 ~~--~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
.. .+.++|+||||+++|+|++|..|+.................. .....+..++..+.+++.+||+.+|++|||+.
T Consensus 181 ~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~ 258 (288)
T cd05583 181 GSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK--SKPPFPKTMSAEARDFIQKLLEKDPKKRLGAN 258 (288)
T ss_pred CCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc--cCCCCCcccCHHHHHHHHHHhcCCHhhccCcc
Confidence 54 688999999999999999999887532111100010111111 11223444567899999999999999999998
Q ss_pred HHHHHhccc
Q 019495 154 SLVTALSPL 162 (340)
Q Consensus 154 ~i~~~L~~~ 162 (340)
++...|...
T Consensus 259 ~~~~~l~~~ 267 (288)
T cd05583 259 GADEIKNHP 267 (288)
T ss_pred hHHHHhcCc
Confidence 887766553
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.5e-25 Score=194.40 Aligned_cols=153 Identities=20% Similarity=0.263 Sum_probs=119.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.|++.||.|||+++ ++||||+|+||+++.++.++|+|||++....... ...+++.|++||++.++
T Consensus 112 l~~~~~~~i~~~l~~al~~LH~~g-i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~ 190 (293)
T cd06647 112 MDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 190 (293)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EeeccCCHHHEEEcCCCCEEEccCcceecccccccccccccCChhhcCchhhccC
Confidence 356778899999999999999999 9999999999999999999999999876544322 23567889999999888
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++|+||||+++|++++|..||............ . .........+...+..+.+++.+||+.+|++||++.+++
T Consensus 191 ~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il 267 (293)
T cd06647 191 AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI-A--TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELL 267 (293)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeeh-h--cCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 8899999999999999999999988654221110000 0 000001112233457899999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 268 ~ 268 (293)
T cd06647 268 Q 268 (293)
T ss_pred c
Confidence 5
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=7e-25 Score=191.19 Aligned_cols=151 Identities=17% Similarity=0.199 Sum_probs=120.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-------CccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-------KSYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~y~aPE~~ 73 (340)
+++.....++.||+.||.|||+++ ++|+||||+||+++.++.++|+|||+++..... ....++..|++||++
T Consensus 103 l~~~~~~~~~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 181 (264)
T cd06653 103 LTENVTRRYTRQILQGVSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVI 181 (264)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhh
Confidence 356788899999999999999999 999999999999999999999999998754321 124578899999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
.+...+.++|+||||+++++|++|+.||......... ...........++...+..+.+++.+||+ +|..||+..
T Consensus 182 ~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~ 256 (264)
T cd06653 182 SGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAI----FKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAE 256 (264)
T ss_pred cCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHH----HHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHH
Confidence 8878899999999999999999999888654222111 11111112234566677889999999999 579999999
Q ss_pred HHHH
Q 019495 154 SLVT 157 (340)
Q Consensus 154 ~i~~ 157 (340)
+++.
T Consensus 257 ~~~~ 260 (264)
T cd06653 257 FLLR 260 (264)
T ss_pred HHhc
Confidence 8864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.5e-25 Score=212.29 Aligned_cols=156 Identities=21% Similarity=0.316 Sum_probs=125.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCcc-----ccCC--cccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY-----STNL--AFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-----~~~~--~y~aPE~~ 73 (340)
|+....++++.||+.|++||+++. +|||||..+|||+..+..+|++|||+++...+...+ .+++ .|||||.+
T Consensus 415 L~~~dLlsfa~QIa~GMe~L~~~~-~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl 493 (609)
T KOG0200|consen 415 LTTKDLLSFAYQIANGMEYLASVP-CVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESL 493 (609)
T ss_pred cCHHHHHHHHHHHHHHHHHHhhCC-ccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHh
Confidence 345677899999999999999999 999999999999999999999999999965544322 1123 49999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCC-CCCcch-hHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKH-IPPSHA-LDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
....++.++|||||||++||++|.+. |+++.. ...+ ........+...|..|+.++..+|+.||+.+|++||+
T Consensus 494 ~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l-----~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~ 568 (609)
T KOG0200|consen 494 FDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEEL-----LEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPT 568 (609)
T ss_pred ccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHH-----HHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCC
Confidence 98889999999999999999999554 554421 1111 1122333444567788899999999999999999999
Q ss_pred HHHHHHHhccc
Q 019495 152 PKSLVTALSPL 162 (340)
Q Consensus 152 ~~~i~~~L~~~ 162 (340)
+.++.+.|...
T Consensus 569 F~~~~~~~~~~ 579 (609)
T KOG0200|consen 569 FSECVEFFEKH 579 (609)
T ss_pred HHHHHHHHHHH
Confidence 99999998874
|
|
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.8e-25 Score=192.29 Aligned_cols=151 Identities=19% Similarity=0.309 Sum_probs=121.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.|++.|+.|||+.+ ++|+||+|+||+++.++.++++|||++....... ...++..|++||.+.+.
T Consensus 98 ~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~ 176 (277)
T cd06641 98 LDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS 176 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHccCC-eecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccCCccccChhhhccC
Confidence 467888999999999999999999 9999999999999999999999999886544321 23567889999999888
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
..+.++|+|||||++|+|++|..|+............ ........+..++..+.+++.+||+.+|.+||++.+++
T Consensus 177 ~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l 251 (277)
T cd06641 177 AYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLI-----PKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELL 251 (277)
T ss_pred CCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHH-----hcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 8899999999999999999999887653322111111 11112223444567899999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 252 ~ 252 (277)
T cd06641 252 K 252 (277)
T ss_pred h
Confidence 6
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-25 Score=210.23 Aligned_cols=151 Identities=19% Similarity=0.288 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC-CCCeEEeccCCCccCCCC-----CccccCCcccCcccccCC---
Q 019495 6 RLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRTG--- 76 (340)
Q Consensus 6 ~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~-~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~--- 76 (340)
...++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||+++....+ ....+++.|+|||.+...
T Consensus 257 i~~i~~qll~aL~yLH~~g-IiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~ 335 (566)
T PLN03225 257 IQTIMRQILFALDGLHSTG-IVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQT 335 (566)
T ss_pred HHHHHHHHHHHHHHHHHCC-EEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCC
Confidence 4468999999999999999 999999999999985 678999999999754332 345678999999966422
Q ss_pred -------------------CCCCCcceehHHHHHHHHhhCCCCCCcchhHHH---hhh-----hhccccccccCCC----
Q 019495 77 -------------------RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI---RDR-----NLQMLTDSCLEGQ---- 125 (340)
Q Consensus 77 -------------------~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~---- 125 (340)
.++.++|||||||++|||+++..++........ ... .......+.....
T Consensus 336 ~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (566)
T PLN03225 336 PSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRG 415 (566)
T ss_pred CCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhh
Confidence 123456999999999999998654433211110 000 0000001000000
Q ss_pred --CCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 126 --FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 126 --~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
..........+|+.+|++.||.+|||+.++++
T Consensus 416 ~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~ 449 (566)
T PLN03225 416 FEVLDLDGGAGWELLKSMMRFKGRQRISAKAALA 449 (566)
T ss_pred hhhccccchHHHHHHHHHccCCcccCCCHHHHhC
Confidence 01111234568999999999999999999986
|
|
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.4e-25 Score=196.83 Aligned_cols=155 Identities=17% Similarity=0.275 Sum_probs=114.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC----CCCeEEeccCCCccCCCC-------CccccCCcccCc
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE----DGNPRLSTFGLMKNSRDG-------KSYSTNLAFTPP 70 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~----~~~~kl~dfg~~~~~~~~-------~~~~~~~~y~aP 70 (340)
++.....++.||+.||.|||+++ ++||||||+||+++. ++.+|++|||++...... ....++..|+||
T Consensus 106 ~~~~~~~i~~qi~~~l~~lH~~~-i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP 184 (316)
T cd07842 106 PPSMVKSLLWQILNGVHYLHSNW-VLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAP 184 (316)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCH
Confidence 55677889999999999999999 999999999999999 899999999998764322 123457889999
Q ss_pred ccccCC-CCCCCcceehHHHHHHHHhhCCCCCCcchhHH--------Hh-hh--------------------hhcccccc
Q 019495 71 EYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDL--------IR-DR--------------------NLQMLTDS 120 (340)
Q Consensus 71 E~~~~~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~--------~~-~~--------------------~~~~~~~~ 120 (340)
|++.+. .++.++|+||||+++++|++|+.||....... .. .. ........
T Consensus 185 E~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 264 (316)
T cd07842 185 ELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKD 264 (316)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhh
Confidence 988764 47889999999999999999998875432111 00 00 00000000
Q ss_pred ccCCCCC-----------chhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 121 CLEGQFT-----------DDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 121 ~~~~~~~-----------~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.....++ ...+..+.+++.+||+.||++|||+.+++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 265 FKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred ccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000111 034467899999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.2e-25 Score=200.80 Aligned_cols=150 Identities=18% Similarity=0.264 Sum_probs=121.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCC-CccccCCCCCCEEecC-CCCeEEeccCCCccCCCC--CccccCCcccCcccccCCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~-~iiH~dlk~~nill~~-~~~~kl~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~ 77 (340)
+.+...+|++||+.||.|||++. +|||||||-+||+|+. .|.|||.|+|++...... .+..|||.|||||+.. ..
T Consensus 141 n~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEmYE-E~ 219 (632)
T KOG0584|consen 141 NIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSVIGTPEFMAPEMYE-EN 219 (632)
T ss_pred CHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccccceeccCccccChHHHh-hh
Confidence 44566789999999999999985 6999999999999974 688999999999876544 4568999999999987 78
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHH-HhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
|+...||||||++++||+|+..|+....... +.......+.+.. +..--.+++.++|.+|+.. ...|||+.|++
T Consensus 220 YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~s----l~kV~dPevr~fIekCl~~-~~~R~sa~eLL 294 (632)
T KOG0584|consen 220 YNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAA----LSKVKDPEVREFIEKCLAT-KSERLSAKELL 294 (632)
T ss_pred cchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHH----hhccCCHHHHHHHHHHhcC-chhccCHHHHh
Confidence 9999999999999999999999887654433 2222233332222 2222347899999999999 99999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 295 ~ 295 (632)
T KOG0584|consen 295 K 295 (632)
T ss_pred h
Confidence 5
|
|
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.4e-25 Score=194.10 Aligned_cols=155 Identities=18% Similarity=0.260 Sum_probs=113.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC-CCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~-~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
++.....++.||+.||.|||+++ ++||||+|+||+++. ++.+|++|||++...... ....+++.|++||++.+.
T Consensus 100 ~~~~~~~~~~qi~~aL~~LH~~~-i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~ 178 (294)
T PLN00009 100 NPRLIKTYLYQILRGIAYCHSHR-VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGS 178 (294)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCcceEEEECCCCEEEEcccccccccCCCccccccCceeecccCHHHHhCC
Confidence 45566789999999999999999 999999999999985 557999999998754322 223457889999998764
Q ss_pred -CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccc-------------------ccC----CCCCchhHH
Q 019495 77 -RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS-------------------CLE----GQFTDDDGT 132 (340)
Q Consensus 77 -~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~----~~~~~~~~~ 132 (340)
.++.++|+||||+++|+|+||..||..................+ ... ....+..+.
T Consensus 179 ~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (294)
T PLN00009 179 RHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEP 258 (294)
T ss_pred CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCCh
Confidence 57889999999999999999998886432211111110000000 000 001223457
Q ss_pred HHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 133 ELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 133 ~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.+.+++.+|++.+|++||++.+++.
T Consensus 259 ~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 259 AGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhc
Confidence 7899999999999999999999985
|
|
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.5e-25 Score=199.20 Aligned_cols=156 Identities=20% Similarity=0.315 Sum_probs=118.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-CccccCCcccCcccccC-CCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRT-GRV 78 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~-~~~ 78 (340)
+++.....++.||+.||.|||+.+ |+||||||+||+++.++.++|+|||++...... ....++..|++||++.+ ..+
T Consensus 115 l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 193 (343)
T cd07851 115 LSDDHIQFLVYQILRGLKYIHSAG-IIHRDLKPSNIAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHY 193 (343)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEccccccccccccccCCcccccccCHHHHhCCCCC
Confidence 467888999999999999999999 999999999999999999999999998765433 33456888999999865 357
Q ss_pred CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccc--cc--------------------ccCC---CCCchhHHH
Q 019495 79 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT--DS--------------------CLEG---QFTDDDGTE 133 (340)
Q Consensus 79 ~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~--~~--------------------~~~~---~~~~~~~~~ 133 (340)
+.++|+||||+++|++++|+.||................. ++ .... ......+..
T Consensus 194 ~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 273 (343)
T cd07851 194 NQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPL 273 (343)
T ss_pred CchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHH
Confidence 8899999999999999999998865432211111100000 00 0000 011123678
Q ss_pred HHHHHHHhhccCCCCCCCHHHHHH
Q 019495 134 LVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 134 l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+.+++.+||+.+|++|||+.+|+.
T Consensus 274 l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 274 AIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HHHHHHHhCCCChhhCCCHHHHhc
Confidence 999999999999999999999974
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-24 Score=221.75 Aligned_cols=163 Identities=25% Similarity=0.433 Sum_probs=124.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHH---hCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCT---SKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH---~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~ 77 (340)
++|.++.+++.||+.||.||| +.+ |+||||||+||+++.++..++. ||............+++.|+|||++.+..
T Consensus 777 l~~~~~~~i~~~ia~~L~yLH~~~~~~-iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~t~~y~aPE~~~~~~ 854 (968)
T PLN00113 777 LSWERRRKIAIGIAKALRFLHCRCSPA-VVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISSAYVAPETRETKD 854 (968)
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCCCC-eecCCCCHHhEEECCCCceEEE-eccccccccCCCccccccccCcccccCCC
Confidence 579999999999999999999 557 9999999999999998888776 66554443344456789999999999888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchh-----HHHh-----hhhhccccccccCCC--CCchhHHHHHHHHHHhhccC
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHAL-----DLIR-----DRNLQMLTDSCLEGQ--FTDDDGTELVRLASRCLQYE 145 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~-----~~~~-----~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~~ 145 (340)
++.++|||||||++|||+||+.|+..... ..+. ........++..... .+.....++.+++.+||+.|
T Consensus 855 ~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~ 934 (968)
T PLN00113 855 ITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATD 934 (968)
T ss_pred CCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCC
Confidence 99999999999999999999998743211 0000 011112222222221 23344567889999999999
Q ss_pred CCCCCCHHHHHHHhcccccC
Q 019495 146 PRERPNPKSLVTALSPLQKE 165 (340)
Q Consensus 146 p~~Rps~~~i~~~L~~~~~~ 165 (340)
|++||++.+|++.|+.+...
T Consensus 935 P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 935 PTARPCANDVLKTLESASRS 954 (968)
T ss_pred chhCcCHHHHHHHHHHhhcc
Confidence 99999999999999887553
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.2e-25 Score=186.30 Aligned_cols=135 Identities=21% Similarity=0.358 Sum_probs=115.1
Q ss_pred HHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccC----CCCCccccCCcccCcccccCCCCCCCcce
Q 019495 9 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS----RDGKSYSTNLAFTPPEYLRTGRVTPESVI 84 (340)
Q Consensus 9 i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 84 (340)
+-.+|+.||.|||+++ ||+||+|.+|.++|++|++||.|||+.+.. ....+++||+.|+|||++....|+...|.
T Consensus 273 YGaEIvsAL~YLHs~~-ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDW 351 (516)
T KOG0690|consen 273 YGAEIVSALGYLHSRN-IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDW 351 (516)
T ss_pred hhHHHHHHhhhhhhCC-eeeeechhhhheeccCCceEeeecccchhcccccceeccccCChhhcCchhhccccccceeeh
Confidence 4578999999999999 999999999999999999999999998753 23357899999999999999999999999
Q ss_pred ehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC
Q 019495 85 YSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150 (340)
Q Consensus 85 ~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 150 (340)
|.+||++|||++|+.||.......+-.-.+.. ...+|...+++...|+...|..||.+|.
T Consensus 352 WG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e------d~kFPr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 352 WGVGVVMYEMMCGRLPFYNKDHEKLFELILME------DLKFPRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred hhhhHHHHHHHhccCcccccchhHHHHHHHhh------hccCCccCCHHHHHHHHHHhhcChHhhc
Confidence 99999999999999999876444333322222 2346777789999999999999999994
|
|
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-24 Score=193.65 Aligned_cols=156 Identities=21% Similarity=0.274 Sum_probs=116.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
+++.....++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||.+....... ...++..|++||++.+
T Consensus 113 ~~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~ 191 (302)
T cd07864 113 FSEDHIKSFMKQLLEGLNYCHKKN-FLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLG 191 (302)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCcEEeCcccccccccCCcccccccceeccCccChHHhcC
Confidence 467889999999999999999999 9999999999999999999999999987654322 1234678999998865
Q ss_pred C-CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccc---c---------c------------CCCCCchh
Q 019495 76 G-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS---C---------L------------EGQFTDDD 130 (340)
Q Consensus 76 ~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~---~---------~------------~~~~~~~~ 130 (340)
. ..+.++|||||||++++|++|+.||..................+ . . ........
T Consensus 192 ~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (302)
T cd07864 192 EERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFI 271 (302)
T ss_pred CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCC
Confidence 3 46889999999999999999998875432111100000000000 0 0 00011124
Q ss_pred HHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 131 GTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 131 ~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+..+.+++.+||+.+|.+||++.+++.
T Consensus 272 ~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 272 PTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 678999999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.6e-24 Score=185.77 Aligned_cols=146 Identities=27% Similarity=0.333 Sum_probs=118.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.|++.||.|||+.+ ++|+||+|+||+++.++.++++|||++...... ....++..|++||.+.+.
T Consensus 90 l~~~~~~~~~~qi~~~l~~lh~~~-~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~ 168 (250)
T cd05123 90 FSEERARFYAAEIVLALEYLHSLG-IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGK 168 (250)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCccccChHHhCCC
Confidence 467888999999999999999999 999999999999999999999999998765432 234568899999999887
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
..+.++|+||||+++|++++|..||.............. ....++...+..+.+++.+||..||++||++.
T Consensus 169 ~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~ 239 (250)
T cd05123 169 GYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK------DPLRFPEFLSPEARDLISGLLQKDPTKRLGSG 239 (250)
T ss_pred CCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc------CCCCCCCCCCHHHHHHHHHHhcCCHhhCCCcc
Confidence 788999999999999999999988865432222111111 12234444568899999999999999999994
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.3e-24 Score=187.15 Aligned_cols=150 Identities=20% Similarity=0.224 Sum_probs=118.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCC--------------------------
Q 019495 3 WAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR-------------------------- 56 (340)
Q Consensus 3 ~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~-------------------------- 56 (340)
....-=++.+|+-||+|||-.| ||+|||||+||||.++|++.|+||.++....
T Consensus 178 e~~aRFYaAEvl~ALEYLHmlG-ivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s 256 (459)
T KOG0610|consen 178 ESAARFYAAEVLLALEYLHMLG-IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPS 256 (459)
T ss_pred hhhHHHHHHHHHHHHHHHHhhc-eeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCccccccccc
Confidence 3344457899999999999999 9999999999999999999999998754210
Q ss_pred ----------C------------------------CCccccCCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCC
Q 019495 57 ----------D------------------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPP 102 (340)
Q Consensus 57 ----------~------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~ 102 (340)
. ..+++||-.|+|||+++|...+.+.|.|+|||++|||+.|..||-
T Consensus 257 ~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFK 336 (459)
T KOG0610|consen 257 CFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFK 336 (459)
T ss_pred ccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcC
Confidence 0 012356788999999999889999999999999999999999998
Q ss_pred cchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC----HHHHHH
Q 019495 103 SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN----PKSLVT 157 (340)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps----~~~i~~ 157 (340)
+......-...+..- ..+. -.+..+..+.+||++.|.+||.+|.. +.||.+
T Consensus 337 G~~~~~Tl~NIv~~~--l~Fp--~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 337 GSNNKETLRNIVGQP--LKFP--EEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR 391 (459)
T ss_pred CCCchhhHHHHhcCC--CcCC--CCCcchhHHHHHHHHHhccChhhhhccccchHHhhc
Confidence 876654443333321 1111 12256789999999999999999988 777764
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.9e-24 Score=186.82 Aligned_cols=150 Identities=16% Similarity=0.255 Sum_probs=120.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.|++.||.|||+.+ ++|+||+|+||+++. +.++++|||++...... ....+++.|++||.+.+.
T Consensus 103 ~~~~~~~~~~~~l~~~l~~lH~~~-i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~ 180 (260)
T cd08222 103 LSENQVCEWFIQLLLGVHYMHQRR-ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQ 180 (260)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHcC-ccccCCChhheEeec-CCEeecccCceeecCCCcccccCCCCCcCccCHHHHccC
Confidence 467888999999999999999999 999999999999975 56999999988765332 234567889999999877
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++|+||||+++|+|++|..|+............... .....+..++..+.+++.+||..+|++||++.+++
T Consensus 181 ~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 255 (260)
T cd08222 181 GYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEG-----PTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEIL 255 (260)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcC-----CCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 7889999999999999999999888654332222221111 12223455678899999999999999999999997
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 256 ~ 256 (260)
T cd08222 256 R 256 (260)
T ss_pred h
Confidence 5
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.3e-25 Score=193.03 Aligned_cols=156 Identities=16% Similarity=0.284 Sum_probs=117.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+.+ ++||||||+||+++.++.++++|||++...... ....++..|++||++.+.
T Consensus 97 ~~~~~~~~~~~qi~~~l~~lH~~~-i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~ 175 (284)
T cd07836 97 LDPNTVKSFTYQLLKGIAFCHENR-VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGS 175 (284)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccccccccccccChHHhcCC
Confidence 467889999999999999999999 999999999999999999999999988654322 123457889999998654
Q ss_pred -CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccc-----------cc-cccCCC-----------CCchhHH
Q 019495 77 -RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML-----------TD-SCLEGQ-----------FTDDDGT 132 (340)
Q Consensus 77 -~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~-----------~~-~~~~~~-----------~~~~~~~ 132 (340)
.++.++|+||||+++|+|++|..||................ .. +..... ..+..+.
T Consensus 176 ~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (284)
T cd07836 176 RTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADP 255 (284)
T ss_pred CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCc
Confidence 46889999999999999999998886543222111111000 00 000000 1123457
Q ss_pred HHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 133 ELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 133 ~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.+.+++.+|++.||.+||++.+++.
T Consensus 256 ~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 256 LGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred HHHHHHHHHhcCCcccCCCHHHHhc
Confidence 7899999999999999999999874
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.3e-25 Score=195.29 Aligned_cols=139 Identities=22% Similarity=0.330 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC---ccccCCcccCcccccCCCCCCCcce
Q 019495 8 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRTGRVTPESVI 84 (340)
Q Consensus 8 ~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~Di 84 (340)
-++.-+++|++|||+++ ||+|||||+|++++.+|-+||.|||+++..+.+. +++||+.|.|||.+.....+.+.|.
T Consensus 524 F~~acv~EAfeYLH~k~-iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDy 602 (732)
T KOG0614|consen 524 FYVACVLEAFEYLHRKG-IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDY 602 (732)
T ss_pred hhHHHHHHHHHHHHhcC-ceeccCChhheeeccCCceEEeehhhHHHhccCCceeeecCCcccccchhhhccCcchhhHH
Confidence 35677899999999999 9999999999999999999999999999877664 6899999999999988888999999
Q ss_pred ehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 85 YSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 85 ~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
||||+++|||++|.+||.+..........+..+. .-.+|..++....++|++.+..+|..|..
T Consensus 603 WaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid----~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 603 WALGILIYELLTGSPPFSGVDPMKTYNLILKGID----KIEFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred HHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhh----hhhcccccchhHHHHHHHHHhcCcHhhhc
Confidence 9999999999999999988766555555544433 22456677788999999999999999966
|
|
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-24 Score=189.32 Aligned_cols=150 Identities=23% Similarity=0.315 Sum_probs=120.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC---------------------
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--------------------- 59 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~--------------------- 59 (340)
+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++++|||++.......
T Consensus 99 l~~~~~~~i~~ql~~~l~~Lh~~~-~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (280)
T cd05581 99 LDEKCTRFYAAEILLALEYLHSKG-IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRR 177 (280)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCcccccccccccc
Confidence 578899999999999999999999 9999999999999999999999999877543221
Q ss_pred ---ccccCCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHH
Q 019495 60 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 136 (340)
Q Consensus 60 ---~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 136 (340)
...++..|++||++.+..++.++|+||||++++++++|+.|+............. .....++...+..+.+
T Consensus 178 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 251 (280)
T cd05581 178 RFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKIL------KLEYSFPPNFPPDAKD 251 (280)
T ss_pred ccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH------hcCCCCCCccCHHHHH
Confidence 1235778999999988888999999999999999999998886543211111111 1122344455688999
Q ss_pred HHHHhhccCCCCCCCH----HHHHH
Q 019495 137 LASRCLQYEPRERPNP----KSLVT 157 (340)
Q Consensus 137 li~~cl~~~p~~Rps~----~~i~~ 157 (340)
++.+||+.+|.+||++ .+++.
T Consensus 252 li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 252 LIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHHHHhcCCHhhCCCcccCHHHHhc
Confidence 9999999999999999 77763
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-24 Score=196.38 Aligned_cols=156 Identities=15% Similarity=0.206 Sum_probs=114.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC-CCCeEEeccCCCccCCCC-------CccccCCcccCccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRDG-------KSYSTNLAFTPPEY 72 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~-~~~~kl~dfg~~~~~~~~-------~~~~~~~~y~aPE~ 72 (340)
+++..+..++.||+.||.|||+.+ ++||||||+||+++. ++.++++|||.++..... ....++..|+|||+
T Consensus 111 l~~~~~~~~~~qi~~aL~~LH~~g-ivH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 189 (342)
T cd07854 111 LSEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRL 189 (342)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHH
Confidence 467788899999999999999999 999999999999974 557899999998754321 12245778999998
Q ss_pred ccC-CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccc---------------cc----cccCC-----CCC
Q 019495 73 LRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML---------------TD----SCLEG-----QFT 127 (340)
Q Consensus 73 ~~~-~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~---------------~~----~~~~~-----~~~ 127 (340)
+.+ ..++.++|||||||++|+|++|+.||................ .. ..... ...
T Consensus 190 ~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (342)
T cd07854 190 LLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLL 269 (342)
T ss_pred HhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHc
Confidence 754 457889999999999999999999886432211111000000 00 00000 011
Q ss_pred chhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 128 DDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 128 ~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
...+..+.+++.+||+.||.+||++.+++.
T Consensus 270 ~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 270 PGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred cCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 234577899999999999999999999985
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-25 Score=186.00 Aligned_cols=151 Identities=19% Similarity=0.258 Sum_probs=121.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
|++.+.-.++..-+.||+|||... -||||||..|||++.+|.+||+|||++....+. .+..||+.|||||++..-
T Consensus 126 L~E~EIs~iL~~TLKGL~YLH~~~-KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EI 204 (502)
T KOG0574|consen 126 LSEQEISAVLRDTLKGLQYLHDLK-KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEI 204 (502)
T ss_pred ccHHHHHHHHHHHHhHHHHHHHHH-HHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccccCcccccHHHHHHh
Confidence 456667788999999999999987 899999999999999999999999999877654 467899999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCC--CCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ--FTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
.|+.++||||||++..||..|++|+.+--. ...+-.+ +-..++. .|...+.++-++++.||..+|++|-++.+
T Consensus 205 GY~~~ADIWSLGITaIEMAEG~PPYsDIHP----MRAIFMI-PT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~ 279 (502)
T KOG0574|consen 205 GYDTKADIWSLGITAIEMAEGRPPYSDIHP----MRAIFMI-PTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALR 279 (502)
T ss_pred ccchhhhHhhhcchhhhhhcCCCCcccccc----cceeEec-cCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHH
Confidence 899999999999999999999988754311 1111111 1111222 24445789999999999999999998887
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
+++
T Consensus 280 L~~ 282 (502)
T KOG0574|consen 280 LCE 282 (502)
T ss_pred Hhh
Confidence 764
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-24 Score=194.96 Aligned_cols=158 Identities=19% Similarity=0.263 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCccc------cCCcccCcccccCCC
Q 019495 4 AMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS------TNLAFTPPEYLRTGR 77 (340)
Q Consensus 4 ~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~------~~~~y~aPE~~~~~~ 77 (340)
..-++|+.||++||+||.+-+ +||||+.+.|+|+|.++++||+|||+++..-.+..+. -..+|||||.+..++
T Consensus 637 ~~~vsi~tqiasgmaYLes~n-fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgk 715 (807)
T KOG1094|consen 637 APGVSICTQIASGMAYLESLN-FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGK 715 (807)
T ss_pred chhHHHHHHHHHHHHHHHhhc-hhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhcc
Confidence 345789999999999999999 9999999999999999999999999999765554332 257899999999999
Q ss_pred CCCCcceehHHHHHHHHhh--CCCCCCcchhHHHhhhhhccccccc--cCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 78 VTPESVIYSFGTLLLDLLS--GKHIPPSHALDLIRDRNLQMLTDSC--LEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~--g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+|.+||+|+||+++||+++ ...|+.+...+......-..+.+.. .-...|.-|+..+.++|.+||..|-.+||+++
T Consensus 716 FttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe 795 (807)
T KOG1094|consen 716 FTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFE 795 (807)
T ss_pred ccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHH
Confidence 9999999999999999865 4456665444433332222222211 11234566889999999999999999999999
Q ss_pred HHHHHhccc
Q 019495 154 SLVTALSPL 162 (340)
Q Consensus 154 ~i~~~L~~~ 162 (340)
++...|...
T Consensus 796 ~lh~~lq~~ 804 (807)
T KOG1094|consen 796 QLHLFLQED 804 (807)
T ss_pred HHHHHHHHh
Confidence 998877653
|
|
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.9e-24 Score=193.19 Aligned_cols=155 Identities=19% Similarity=0.315 Sum_probs=116.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-CccccCCcccCcccccC-CCCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRT-GRVT 79 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~-~~~~ 79 (340)
++.....++.||++||.|||+++ ++||||+|+||+++.++.++++|||.+...... ....++..|++||++.+ ..++
T Consensus 106 ~~~~~~~~~~ql~~aL~~LH~~~-iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 184 (328)
T cd07856 106 EKQFIQYFLYQILRGLKYVHSAG-VVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYD 184 (328)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEeECCCCCEEeCccccccccCCCcCCCcccccccCceeeeccCCcC
Confidence 45667789999999999999999 999999999999999999999999998754433 23456788999999866 4688
Q ss_pred CCcceehHHHHHHHHhhCCCCCCcchhHHHhh-------------------hhhcccccc-ccCCC-----CCchhHHHH
Q 019495 80 PESVIYSFGTLLLDLLSGKHIPPSHALDLIRD-------------------RNLQMLTDS-CLEGQ-----FTDDDGTEL 134 (340)
Q Consensus 80 ~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~-------------------~~~~~~~~~-~~~~~-----~~~~~~~~l 134 (340)
.++|+||||+++|+|++|+.||.......... .....+... ..... ..+.++..+
T Consensus 185 ~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (328)
T cd07856 185 VEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSA 264 (328)
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHH
Confidence 99999999999999999998886532211000 000000000 00000 112345789
Q ss_pred HHHHHHhhccCCCCCCCHHHHHH
Q 019495 135 VRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 135 ~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.++|.+||+.+|++||++.+++.
T Consensus 265 ~~li~~~l~~~P~~R~t~~ell~ 287 (328)
T cd07856 265 IDLLEKMLVFDPQKRISAAEALA 287 (328)
T ss_pred HHHHHHHcCCChhhCCCHHHHhc
Confidence 99999999999999999999875
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2e-24 Score=195.56 Aligned_cols=156 Identities=16% Similarity=0.241 Sum_probs=118.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-ccccCCcccCcccccC-CCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-SYSTNLAFTPPEYLRT-GRV 78 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-~~~~~~~y~aPE~~~~-~~~ 78 (340)
+++.+...++.||+.||.|||+.+ |+||||||+||+++.++.++++|||++....... ...+++.|++||++.+ ..+
T Consensus 115 l~~~~~~~i~~qi~~al~~LH~~g-i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 193 (343)
T cd07880 115 LSEDRIQFLVYQMLKGLKYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHY 193 (343)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccccccccCccccccCCcccCHHHHhCCCCC
Confidence 467888999999999999999999 9999999999999999999999999987654332 3456889999999875 357
Q ss_pred CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhc-------------------cccc--cccC----CCCCchhHHH
Q 019495 79 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-------------------MLTD--SCLE----GQFTDDDGTE 133 (340)
Q Consensus 79 ~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~-------------------~~~~--~~~~----~~~~~~~~~~ 133 (340)
+.++|+||||+++|++++|..||.............. .... +... ......++..
T Consensus 194 ~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (343)
T cd07880 194 TQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPL 273 (343)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChH
Confidence 8899999999999999999988865322111000000 0000 0000 0112344567
Q ss_pred HHHHHHHhhccCCCCCCCHHHHHH
Q 019495 134 LVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 134 l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+.+++.+|++.||++|||+.+++.
T Consensus 274 ~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 274 AVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HHHHHHHHcCCChhhCCCHHHHhc
Confidence 899999999999999999999984
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.6e-24 Score=194.17 Aligned_cols=163 Identities=18% Similarity=0.244 Sum_probs=119.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC--------------C----Cccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--------------G----KSYS 62 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~--------------~----~~~~ 62 (340)
+++.....++.||+.||.|||+.+ ++||||+|+||+++.++.++++|||++..... . ....
T Consensus 116 ~~~~~~~~~~~ql~~aL~~LH~~~-i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (335)
T PTZ00024 116 LTESQVKCILLQILNGLNVLHKWY-FMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKV 194 (335)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHeEECCCCCEEECCccceeecccccccccccccccccccccccccc
Confidence 467788899999999999999999 99999999999999999999999998865441 0 1123
Q ss_pred cCCcccCcccccCC-CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccc---cc----------------cc
Q 019495 63 TNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT---DS----------------CL 122 (340)
Q Consensus 63 ~~~~y~aPE~~~~~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~---~~----------------~~ 122 (340)
++..|++||++.+. .++.++|+||||+++|+|++|..||...............+. +. ..
T Consensus 195 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (335)
T PTZ00024 195 VTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRK 274 (335)
T ss_pred cccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCC
Confidence 46789999998764 468899999999999999999988865432211111100000 00 00
Q ss_pred C---CCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccccCC
Q 019495 123 E---GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 166 (340)
Q Consensus 123 ~---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~ 166 (340)
. .......+..+.+++.+||+.+|++||++.+++. ..+....
T Consensus 275 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~--~~~~~~~ 319 (335)
T PTZ00024 275 PKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK--HEYFKSD 319 (335)
T ss_pred cccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc--CcccCCC
Confidence 0 0011233577899999999999999999999985 4444433
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3e-24 Score=180.69 Aligned_cols=160 Identities=18% Similarity=0.246 Sum_probs=121.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRV 78 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~ 78 (340)
+-.+.-.+++|+++|+.|||+.+ |+||||||+||++..++.+||+|||+++..... +.++.|..|.|||++-+-.+
T Consensus 116 DH~tis~i~yq~~~~ik~lhs~~-IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ 194 (369)
T KOG0665|consen 116 DHETISYILYQMLCGIKHLHSAG-IIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGY 194 (369)
T ss_pred chHHHHHHHHHHHHHHHHHHhcc-eeecccCcccceecchhheeeccchhhcccCcccccCchhheeeccCchheeccCC
Confidence 34566678999999999999999 999999999999999999999999999876655 34467889999999988779
Q ss_pred CCCcceehHHHHHHHHhhCCCCCCcchh-------------------HH--------------Hhhhhhcc-ccccccCC
Q 019495 79 TPESVIYSFGTLLLDLLSGKHIPPSHAL-------------------DL--------------IRDRNLQM-LTDSCLEG 124 (340)
Q Consensus 79 ~~~~Di~s~G~il~el~~g~~~~~~~~~-------------------~~--------------~~~~~~~~-~~~~~~~~ 124 (340)
....||||+||++.||++|...|++... .. .....+.+ ++|..+..
T Consensus 195 ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~ 274 (369)
T KOG0665|consen 195 KENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPV 274 (369)
T ss_pred cccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccc
Confidence 9999999999999999999987765310 00 00000111 11111111
Q ss_pred C--CCchhHHHHHHHHHHhhccCCCCCCCHHHHHHHhccccc
Q 019495 125 Q--FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 164 (340)
Q Consensus 125 ~--~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~ 164 (340)
. .++..+..+.+++.+||..+|++|.|+++++. +++.+
T Consensus 275 ~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~--HPY~~ 314 (369)
T KOG0665|consen 275 VLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR--HPYIK 314 (369)
T ss_pred cccCCccchHHHHHHHHHhhccChhhcccHHHHhc--CCeee
Confidence 1 12234567899999999999999999999985 55544
|
|
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.2e-24 Score=189.63 Aligned_cols=154 Identities=20% Similarity=0.307 Sum_probs=115.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
+++.....++.||+.||.|||+.+ ++||||+|+||+++.++.++|+|||++....... ...++..|++||.+.+
T Consensus 102 l~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 180 (290)
T cd05613 102 FKEQEVQIYSGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRG 180 (290)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEECCCCCEEEeeCccceecccccccccccccCCcccCChhhccC
Confidence 356677788899999999999999 9999999999999999999999999987654321 3457889999999875
Q ss_pred C--CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC---
Q 019495 76 G--RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP--- 150 (340)
Q Consensus 76 ~--~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp--- 150 (340)
. .++.++|+||||+++|+|++|..|+...............+.. ....++..++..+.+++.+||+.+|++||
T Consensus 181 ~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~ 258 (290)
T cd05613 181 GDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYPQEMSALAKDIIQRLLMKDPKKRLGCG 258 (290)
T ss_pred CCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhc--cCCCCCccCCHHHHHHHHHHhcCCHHHhcCCC
Confidence 3 4678999999999999999999887532111000011111111 11234455678899999999999999997
Q ss_pred --CHHHHHH
Q 019495 151 --NPKSLVT 157 (340)
Q Consensus 151 --s~~~i~~ 157 (340)
+..+++.
T Consensus 259 ~~~~~~l~~ 267 (290)
T cd05613 259 PSDADEIKK 267 (290)
T ss_pred CCCHHHHHc
Confidence 5666653
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.1e-24 Score=184.54 Aligned_cols=154 Identities=17% Similarity=0.256 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCC--------------------CCeEEeccCCCccCCCC-Ccc
Q 019495 3 WAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED--------------------GNPRLSTFGLMKNSRDG-KSY 61 (340)
Q Consensus 3 ~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~--------------------~~~kl~dfg~~~~~~~~-~~~ 61 (340)
..+.-.|..|++.++.|||+.+ ++|-||||+|||+.+. ..++|+|||.++..... .+.
T Consensus 191 i~~ir~m~~QL~~sv~fLh~~k-l~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~i 269 (415)
T KOG0671|consen 191 IDHIRHMGYQLLESVAFLHDLK-LTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTI 269 (415)
T ss_pred hHHHHHHHHHHHHHHHHHHhcc-eeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCccee
Confidence 4566789999999999999999 9999999999998322 24789999999876544 355
Q ss_pred ccCCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHH---Hhhhhhcccc--------------------
Q 019495 62 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL---IRDRNLQMLT-------------------- 118 (340)
Q Consensus 62 ~~~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~---~~~~~~~~~~-------------------- 118 (340)
+.|..|.|||++.+-+.+.++||||+||||.||+||...|....... +-...+..++
T Consensus 270 VsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw 349 (415)
T KOG0671|consen 270 VSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDW 349 (415)
T ss_pred eeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccC
Confidence 78999999999999999999999999999999999998775532111 0000000000
Q ss_pred -------------ccccCC----CCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 119 -------------DSCLEG----QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 119 -------------~~~~~~----~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+++.+. ........++.+|+++||..||.+|+|+.|++.
T Consensus 350 ~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 350 PEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred ccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence 000000 012234578999999999999999999999984
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.6e-24 Score=183.24 Aligned_cols=140 Identities=20% Similarity=0.354 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccC----CCCCccccCCcccCcccccCCCCCC
Q 019495 5 MRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS----RDGKSYSTNLAFTPPEYLRTGRVTP 80 (340)
Q Consensus 5 ~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~ 80 (340)
..+-++.+|+-||-|||++| ||+||||.+||++|.+|++||+|||+.+.. .+..+++||+-|+|||.+..++|+.
T Consensus 451 ~AvFYAaEiaigLFFLh~kg-IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgk 529 (683)
T KOG0696|consen 451 VAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGK 529 (683)
T ss_pred hhhhhhHHHHHHhhhhhcCC-eeeeeccccceEeccCCceEeeecccccccccCCcceeeecCCCcccccceEEeccccc
Confidence 45667899999999999999 999999999999999999999999998753 2345789999999999999999999
Q ss_pred CcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 81 ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 81 ~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
+.|.|||||+||||+.|++||.++.-+.+-. .+.+.. -.+|...+.+...++...+...|.+|..
T Consensus 530 svDWWa~GVLLyEmlaGQpPFdGeDE~elF~----aI~ehn--vsyPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 530 SVDWWAFGVLLYEMLAGQPPFDGEDEDELFQ----AIMEHN--VSYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred chhHHHHHHHHHHHHcCCCCCCCCCHHHHHH----HHHHcc--CcCcccccHHHHHHHHHHhhcCCccccC
Confidence 9999999999999999999998764433322 222222 2467778899999999999999999943
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.3e-23 Score=177.49 Aligned_cols=152 Identities=24% Similarity=0.309 Sum_probs=120.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
+++..+..++.+++.++.|||+.+ ++|+||+|+||+++.++.++++|||.+...... ....++..|++||.+.+..
T Consensus 84 ~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~ 162 (244)
T smart00220 84 LSEDEARFYARQILSALEYLHSNG-IIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKG 162 (244)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcC-eecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHHHccCC
Confidence 467888999999999999999999 999999999999999999999999998776543 3445788999999998778
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCc-chhHHHhhhhhccccccccCCCCCc-hhHHHHHHHHHHhhccCCCCCCCHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPS-HALDLIRDRNLQMLTDSCLEGQFTD-DDGTELVRLASRCLQYEPRERPNPKSL 155 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~li~~cl~~~p~~Rps~~~i 155 (340)
++.++|+||||++++++++|..|+.. .....+....... ........ ..+..+.+++.+||..+|++||++.++
T Consensus 163 ~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~ 238 (244)
T smart00220 163 YGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKP----KPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEA 238 (244)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhcc----CCCCccccccCCHHHHHHHHHHccCCchhccCHHHH
Confidence 89999999999999999999988755 2221111111111 11101111 155789999999999999999999999
Q ss_pred HH
Q 019495 156 VT 157 (340)
Q Consensus 156 ~~ 157 (340)
+.
T Consensus 239 ~~ 240 (244)
T smart00220 239 LQ 240 (244)
T ss_pred hh
Confidence 85
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.9e-23 Score=169.49 Aligned_cols=155 Identities=20% Similarity=0.287 Sum_probs=114.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC--------ccccCCcccCcccc
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--------SYSTNLAFTPPEYL 73 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~--------~~~~~~~y~aPE~~ 73 (340)
+..+.-+++.++..||.|+|.+. |+|||+|+.|+||+.+|.+||+|||+++...... ..+-|++|.+||.+
T Consensus 122 sls~Ikk~Mk~Lm~GL~~iHr~k-ilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEll 200 (376)
T KOG0669|consen 122 SLSEIKKVMKGLMNGLYYIHRNK-ILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELL 200 (376)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhh-HHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHh
Confidence 44566789999999999999998 9999999999999999999999999997654332 22348999999999
Q ss_pred cCC-CCCCCcceehHHHHHHHHhhCCCCCCcchhH-------HHhhhhhcccccc--------------ccCCCC-----
Q 019495 74 RTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALD-------LIRDRNLQMLTDS--------------CLEGQF----- 126 (340)
Q Consensus 74 ~~~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~-------~~~~~~~~~~~~~--------------~~~~~~----- 126 (340)
.|. .++++.|||..|||+.||+||.+.+.+.+.. .+......++.+. ...+.+
T Consensus 201 LG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n 280 (376)
T KOG0669|consen 201 LGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKN 280 (376)
T ss_pred hcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhh
Confidence 874 6899999999999999999999776543110 0000000000000 000000
Q ss_pred ---CchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 127 ---TDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 127 ---~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
|-.-.....+++.+++..||.+|+.++++++
T Consensus 281 ~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 281 RLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred hcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 1111347889999999999999999999986
|
|
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.3e-24 Score=192.13 Aligned_cols=147 Identities=24% Similarity=0.347 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCCC-C
Q 019495 4 AMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRV-T 79 (340)
Q Consensus 4 ~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~-~ 79 (340)
..+-.++.|++++++|||+++ |+|||||.+||+|+.+-++||+|||++.....+ .+++|++.|.|||++.+.++ +
T Consensus 155 ~~ar~~F~q~vsaveYcH~k~-ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~g 233 (596)
T KOG0586|consen 155 KEARAKFRQIVSAVEYCHSKN-IVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDG 233 (596)
T ss_pred hhhhhhhHHHHHHHHHHhhcc-eeccccchhhcccccccceeeeccccceeecccccccccCCCCCccChHhhcCcccCC
Confidence 456678999999999999999 999999999999999999999999998876544 57889999999999998664 7
Q ss_pred CCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 80 PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 80 ~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+..|+||+|+++|-|+.|..||.+.....+....+... -.++-..+.++.++|++++..+|.+|++.++|..
T Consensus 234 pe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk------~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 234 PEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGK------YRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred cceehhhhhhhheeeeecccccCCcccccccchheeee------ecccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence 89999999999999999999998766555444433331 1244456678999999999999999999999875
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.2e-23 Score=180.53 Aligned_cols=167 Identities=16% Similarity=0.218 Sum_probs=121.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhC--------CCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSK--------GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLA 66 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~--------~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~ 66 (340)
++|....+|+..+++||+|||+. .+|+|||||+.||||-.|+++.|+|||++....++. ..+||.+
T Consensus 304 isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~R 383 (534)
T KOG3653|consen 304 ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRR 383 (534)
T ss_pred ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhh
Confidence 58999999999999999999974 249999999999999999999999999998765443 3578999
Q ss_pred ccCcccccCCC-CC-----CCcceehHHHHHHHHhhCCCCC-------Ccc----------hhHHHhhhhhccccccccC
Q 019495 67 FTPPEYLRTGR-VT-----PESVIYSFGTLLLDLLSGKHIP-------PSH----------ALDLIRDRNLQMLTDSCLE 123 (340)
Q Consensus 67 y~aPE~~~~~~-~~-----~~~Di~s~G~il~el~~g~~~~-------~~~----------~~~~~~~~~~~~~~~~~~~ 123 (340)
|||||++.+.- +. .+.||||+|.|+|||++....+ ... ..+.+....+..-..|.++
T Consensus 384 YMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p 463 (534)
T KOG3653|consen 384 YMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIP 463 (534)
T ss_pred hcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCCh
Confidence 99999998632 22 3689999999999998854322 110 1111111111111111111
Q ss_pred CCC-CchhHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccccCCC
Q 019495 124 GQF-TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 167 (340)
Q Consensus 124 ~~~-~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~~ 167 (340)
..+ .......+.+.+..||+.||+.|.|+.=+.+.+..+....+
T Consensus 464 ~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 464 DAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred hhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 111 11234678999999999999999999999888877766554
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.1e-23 Score=178.14 Aligned_cols=153 Identities=22% Similarity=0.260 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCcc------ccCCcccCcccccCCC
Q 019495 4 AMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY------STNLAFTPPEYLRTGR 77 (340)
Q Consensus 4 ~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~------~~~~~y~aPE~~~~~~ 77 (340)
.+.+.++.|++.|++|||..+ |||.||..+|++||+.-++|++|=.+++..-+..-+ .....||+||.+....
T Consensus 396 ~qlV~masQla~am~hlh~~~-ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~ 474 (563)
T KOG1024|consen 396 IQLVLMASQLAMAMEHLHNHG-VIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSH 474 (563)
T ss_pred HHHHHHHHHHHHHHHHHHhcC-cccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhh
Confidence 466789999999999999999 999999999999999999999999998876554322 2245799999999999
Q ss_pred CCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
++..+|+|||||++|||+| |+.|+..-.+..+. .......+...|-+|+.++..+|.-||...|++||+++++.
T Consensus 475 yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~-----~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv 549 (563)
T KOG1024|consen 475 YSSASDVWSFGVLLWELMTLGKLPYAEIDPFEME-----HYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLV 549 (563)
T ss_pred hcchhhhHHHHHHHHHHHhcCCCCccccCHHHHH-----HHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHH
Confidence 9999999999999999998 44454332222221 11222334456778999999999999999999999999999
Q ss_pred HHhccc
Q 019495 157 TALSPL 162 (340)
Q Consensus 157 ~~L~~~ 162 (340)
..|...
T Consensus 550 ~cLseF 555 (563)
T KOG1024|consen 550 ICLSEF 555 (563)
T ss_pred HHHHHH
Confidence 888765
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.9e-23 Score=196.11 Aligned_cols=151 Identities=19% Similarity=0.238 Sum_probs=121.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCC-CCC----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR-DGK----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~-~~~----~~~~~~~y~aPE~~~~ 75 (340)
+|+.+..-++..|+-||.-+|+.| +|||||||+|||||..|++||+|||.+-.+. ++. .-+|||-|.+||+++.
T Consensus 172 ~pE~~ArFY~aEiVlAldslH~mg-yVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs 250 (1317)
T KOG0612|consen 172 LPEDWARFYTAEIVLALDSLHSMG-YVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQS 250 (1317)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhcc-ceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHh
Confidence 467777889999999999999999 9999999999999999999999999765544 443 3479999999999963
Q ss_pred -----CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCC--chhHHHHHHHHHHhhccCCCC
Q 019495 76 -----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT--DDDGTELVRLASRCLQYEPRE 148 (340)
Q Consensus 76 -----~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~~p~~ 148 (340)
+.|++.+|.||+||++|||+.|..||..+.........+.-- -...+| ..++.+..+||.+.+ -+|+.
T Consensus 251 ~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk----~~l~FP~~~~VSeeakdLI~~ll-~~~e~ 325 (1317)
T KOG0612|consen 251 QGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHK----ESLSFPDETDVSEEAKDLIEALL-CDREV 325 (1317)
T ss_pred hcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchh----hhcCCCcccccCHHHHHHHHHHh-cChhh
Confidence 468999999999999999999999999876655444433321 111233 346789999998776 67888
Q ss_pred CCC---HHHHHH
Q 019495 149 RPN---PKSLVT 157 (340)
Q Consensus 149 Rps---~~~i~~ 157 (340)
|.+ +.+|..
T Consensus 326 RLgrngiedik~ 337 (1317)
T KOG0612|consen 326 RLGRNGIEDIKN 337 (1317)
T ss_pred hcccccHHHHHh
Confidence 987 888875
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-23 Score=195.60 Aligned_cols=146 Identities=28% Similarity=0.343 Sum_probs=109.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC---CC--CeEEeccCCCccCCCCC-------ccccCCcccCcccc
Q 019495 6 RLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DG--NPRLSTFGLMKNSRDGK-------SYSTNLAFTPPEYL 73 (340)
Q Consensus 6 ~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~---~~--~~kl~dfg~~~~~~~~~-------~~~~~~~y~aPE~~ 73 (340)
.+.++.|+++||++||+-+ ||||||||.||||+. ++ +++|+|||+++....+. ...||-+|+|||++
T Consensus 608 ~~~~l~q~~~GlaHLHsl~-iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L 686 (903)
T KOG1027|consen 608 PISVLSQIASGLAHLHSLK-IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQL 686 (903)
T ss_pred HHHHHHHHHHHHHHHHhcc-cccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHH
Confidence 3678999999999999998 999999999999975 34 58999999998765442 33579999999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCC-CCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGK-HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
....-+.+.||||+||++|+.++|+ +||... .....+ .+.... .+..-.+.. .....+||.+|++.+|..||++
T Consensus 687 ~~~~~~~avDiFslGCvfyYvltgG~HpFGd~-~~R~~N-Il~~~~--~L~~L~~~~-d~eA~dLI~~ml~~dP~~RPsa 761 (903)
T KOG1027|consen 687 REDRKTQAVDIFSLGCVFYYVLTGGSHPFGDS-LERQAN-ILTGNY--TLVHLEPLP-DCEAKDLISRMLNPDPQLRPSA 761 (903)
T ss_pred hccccCcccchhhcCceEEEEecCCccCCCch-HHhhhh-hhcCcc--ceeeeccCc-hHHHHHHHHHhcCCCcccCCCH
Confidence 9888888999999999999999985 555443 221111 111100 000000111 1178999999999999999999
Q ss_pred HHHHH
Q 019495 153 KSLVT 157 (340)
Q Consensus 153 ~~i~~ 157 (340)
.+|+.
T Consensus 762 ~~VL~ 766 (903)
T KOG1027|consen 762 TDVLN 766 (903)
T ss_pred HHHhC
Confidence 99984
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-22 Score=189.94 Aligned_cols=156 Identities=19% Similarity=0.300 Sum_probs=127.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc-cc-----cCCcccCcccccCCC
Q 019495 4 AMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YS-----TNLAFTPPEYLRTGR 77 (340)
Q Consensus 4 ~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~-----~~~~y~aPE~~~~~~ 77 (340)
+..+.|..||++||.|||++. ++||||..+|||+..-..+|+.|||+++....... +. ..+.|||-|.++...
T Consensus 798 q~lLnw~~QIAkgM~YLe~qr-lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~ 876 (1177)
T KOG1025|consen 798 QDLLNWCYQIAKGMKYLEEQR-LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRK 876 (1177)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-hhhhhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccC
Confidence 456889999999999999998 99999999999999999999999999998765532 21 246799999999999
Q ss_pred CCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
++.++|||||||++||++| |..|+.+.....+ ..+....-+...|+.++.++..++.+||..|++.||+|+++.
T Consensus 877 ~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI-----~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~ 951 (1177)
T KOG1025|consen 877 YTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEI-----PDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELA 951 (1177)
T ss_pred CCchhhhhhhhhhHHHHHhcCCCccCCCCHHHh-----hHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHH
Confidence 9999999999999999998 5566655433333 233333334456778899999999999999999999999998
Q ss_pred HHhcccccC
Q 019495 157 TALSPLQKE 165 (340)
Q Consensus 157 ~~L~~~~~~ 165 (340)
..+..+.+.
T Consensus 952 ~~fs~~ard 960 (1177)
T KOG1025|consen 952 EEFSRMARD 960 (1177)
T ss_pred HHHHHHhcC
Confidence 887766544
|
|
| >KOG0553 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-22 Score=168.62 Aligned_cols=111 Identities=24% Similarity=0.298 Sum_probs=106.6
Q ss_pred hHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHH
Q 019495 226 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 305 (340)
Q Consensus 226 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 305 (340)
+....++.++.+|+.+++.++|++|+..|++||+++|. ++.+|++||.+|.++|+|..|+++|+.||.+||.+.++|.+
T Consensus 76 e~~~~AE~LK~eGN~~m~~~~Y~eAv~kY~~AI~l~P~-nAVyycNRAAAy~~Lg~~~~AVkDce~Al~iDp~yskay~R 154 (304)
T KOG0553|consen 76 EDKALAESLKNEGNKLMKNKDYQEAVDKYTEAIELDPT-NAVYYCNRAAAYSKLGEYEDAVKDCESALSIDPHYSKAYGR 154 (304)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHhcchHHHHHHHHHHHhcChHHHHHHHH
Confidence 35667889999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 306 QAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 306 ~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
+|.+|+.+|+|++|+++|++||++||++...|
T Consensus 155 LG~A~~~~gk~~~A~~aykKaLeldP~Ne~~K 186 (304)
T KOG0553|consen 155 LGLAYLALGKYEEAIEAYKKALELDPDNESYK 186 (304)
T ss_pred HHHHHHccCcHHHHHHHHHhhhccCCCcHHHH
Confidence 99999999999999999999999999998654
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.6e-23 Score=168.36 Aligned_cols=154 Identities=19% Similarity=0.295 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCcc-----ccCCcccCcccccCC-CC
Q 019495 5 MRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY-----STNLAFTPPEYLRTG-RV 78 (340)
Q Consensus 5 ~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~y~aPE~~~~~-~~ 78 (340)
..--+++||+.||.|||+.+ |+||||||.|.|++.+..+||||||+++........ +-|-.|.|||.+.|. .|
T Consensus 157 HvKVFlYQILRGLKYLHsA~-ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhY 235 (449)
T KOG0664|consen 157 HVKVFVYQILRGLKYLHTAN-ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRY 235 (449)
T ss_pred hhhhhHHHHHhhhHHHhhcc-hhhccCCCccEEeccCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhh
Confidence 34457899999999999999 999999999999999999999999999876544322 236789999999875 59
Q ss_pred CCCcceehHHHHHHHHhhCCCCCCcchh----------------HHHhh----hhhccccccccCCC------C--Cchh
Q 019495 79 TPESVIYSFGTLLLDLLSGKHIPPSHAL----------------DLIRD----RNLQMLTDSCLEGQ------F--TDDD 130 (340)
Q Consensus 79 ~~~~Di~s~G~il~el~~g~~~~~~~~~----------------~~~~~----~~~~~~~~~~~~~~------~--~~~~ 130 (340)
+.+.||||.|||+.||+-.+..|..... +.++. .....+..+...+. + +..-
T Consensus 236 s~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~ 315 (449)
T KOG0664|consen 236 TGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDK 315 (449)
T ss_pred cCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCccc
Confidence 9999999999999999987766633211 00000 00000000000011 1 1122
Q ss_pred HHHHHHHHHHhhccCCCCCCCHHHHHHHh
Q 019495 131 GTELVRLASRCLQYEPRERPNPKSLVTAL 159 (340)
Q Consensus 131 ~~~l~~li~~cl~~~p~~Rps~~~i~~~L 159 (340)
..+...++..++..||++|.+..+.+..+
T Consensus 316 ~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 316 NHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred chHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 34566777889999999999988877543
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.5e-22 Score=155.43 Aligned_cols=156 Identities=20% Similarity=0.327 Sum_probs=117.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~ 76 (340)
|+....-+++.|++.||.|+|+.+ ++|||+||.|.+|+.+|.+|++|||+++-.+-.. .-+-|.+|.+|.++.+.
T Consensus 98 ~d~~~~rsfmlqllrgl~fchshn-vlhrdlkpqnllin~ngelkladfglarafgipvrcysaevvtlwyrppdvlfga 176 (292)
T KOG0662|consen 98 LDPEIVRSFMLQLLRGLGFCHSHN-VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 176 (292)
T ss_pred CCHHHHHHHHHHHHhhhhhhhhhh-hhhccCCcceEEeccCCcEEecccchhhhcCCceEeeeceeeeeeccCcceeeee
Confidence 345667789999999999999999 9999999999999999999999999998765442 22458999999999986
Q ss_pred C-CCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhh--------------hccccccccCCCCC---------chhH
Q 019495 77 R-VTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRN--------------LQMLTDSCLEGQFT---------DDDG 131 (340)
Q Consensus 77 ~-~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~---------~~~~ 131 (340)
+ |+...|+||-|||+.|+.. |++.|++......-... +..+++-..-+.+| +...
T Consensus 177 kly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~ln 256 (292)
T KOG0662|consen 177 KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLN 256 (292)
T ss_pred ehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhc
Confidence 5 8999999999999999986 55666664322211111 11122111111122 2234
Q ss_pred HHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 132 TELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 132 ~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
..-.+++.+.+.-+|.+|.++++.++
T Consensus 257 s~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 257 STGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred chhHHHHHHHhccCcccccCHHHHhc
Confidence 56788999999999999999998774
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.3e-22 Score=170.56 Aligned_cols=148 Identities=18% Similarity=0.327 Sum_probs=115.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccC-C---CCCccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-R---DGKSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~-~---~~~~~~~~~~y~aPE~~~~~ 76 (340)
|++...--+..+|+-||.|||+.| ||+||||.+|||+|..|++|+.|+|+.+.. . ...+++||+.|.|||.+++.
T Consensus 348 lpeeharfys~ei~lal~flh~rg-iiyrdlkldnvlldaeghikltdygmcke~l~~gd~tstfcgtpnyiapeilrge 426 (593)
T KOG0695|consen 348 LPEEHARFYSAEICLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGE 426 (593)
T ss_pred CcHHHhhhhhHHHHHHHHHHhhcC-eeeeeccccceEEccCCceeecccchhhcCCCCCcccccccCCCcccchhhhccc
Confidence 456666678889999999999999 999999999999999999999999998753 2 23567999999999999999
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHH----HhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDL----IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
.|....|.|++||+++||+.|+.||.--..+. ...-.++.+.... ..+|...+.....+++..++.||..|..
T Consensus 427 eygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekq--iriprslsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 427 EYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQ--IRIPRSLSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred ccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhc--ccccceeehhhHHHHHHhhcCCcHHhcC
Confidence 99999999999999999999999984321110 0001111121111 2356666677889999999999999943
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-21 Score=172.11 Aligned_cols=154 Identities=19% Similarity=0.330 Sum_probs=116.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhC-CCccccCCCCCCEEec---CCCCeEEeccCCCccCCCCC-----------ccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFD---EDGNPRLSTFGLMKNSRDGK-----------SYSTNL 65 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~-~~iiH~dlk~~nill~---~~~~~kl~dfg~~~~~~~~~-----------~~~~~~ 65 (340)
+++++.-.|+.||+.||.||-+. .+|||-||||.|||+. ..|.+||.|||+++.+.+.. ...||.
T Consensus 565 mSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTY 644 (775)
T KOG1151|consen 565 MSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTY 644 (775)
T ss_pred hhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCcee
Confidence 46788899999999999999986 3699999999999984 45679999999999875442 134799
Q ss_pred cccCcccccCC----CCCCCcceehHHHHHHHHhhCCCCCCcchh-H-HHhhhhhccccccccCCCCCchhHHHHHHHHH
Q 019495 66 AFTPPEYLRTG----RVTPESVIYSFGTLLLDLLSGKHIPPSHAL-D-LIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 139 (340)
Q Consensus 66 ~y~aPE~~~~~----~~~~~~Di~s~G~il~el~~g~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 139 (340)
+|++||++.-+ +.+.+.||||+|||+|..+.|+.||..... . .+....+.......+ +..+..+++...+|+
T Consensus 645 WYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqF--P~KPvVsseAkaFIR 722 (775)
T KOG1151|consen 645 WYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQF--PPKPVVSSEAKAFIR 722 (775)
T ss_pred eecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccC--CCCCccCHHHHHHHH
Confidence 99999998643 468899999999999999999999965321 1 122222222111111 112335688999999
Q ss_pred HhhccCCCCCCCHHHHH
Q 019495 140 RCLQYEPRERPNPKSLV 156 (340)
Q Consensus 140 ~cl~~~p~~Rps~~~i~ 156 (340)
+||++.-++|....++.
T Consensus 723 RCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 723 RCLAYRKEDRIDVQQLA 739 (775)
T ss_pred HHHHhhhhhhhhHHHHc
Confidence 99999999998877765
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.2e-22 Score=183.06 Aligned_cols=103 Identities=23% Similarity=0.331 Sum_probs=92.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEe--cCCCC--eEEeccCCCccCCCCC---ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF--DEDGN--PRLSTFGLMKNSRDGK---SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill--~~~~~--~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~ 73 (340)
|++.+.+.++.+++.||.|||+++ |+||||||.||++ +.+|. -||+|||.++...++. +..||..|.+||++
T Consensus 117 LpE~e~l~lL~d~~~al~~LrEn~-IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~ 195 (732)
T KOG4250|consen 117 LPESEFLDLLSDLVSALRHLRENG-IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELY 195 (732)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcC-ceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCeeeeecCchhhcChHHH
Confidence 678889999999999999999999 9999999999998 34455 6999999999988774 56899999999999
Q ss_pred cC-CCCCCCcceehHHHHHHHHhhCCCCCCcc
Q 019495 74 RT-GRVTPESVIYSFGTLLLDLLSGKHIPPSH 104 (340)
Q Consensus 74 ~~-~~~~~~~Di~s~G~il~el~~g~~~~~~~ 104 (340)
.. +.++...|.|||||++|+.+||..||...
T Consensus 196 E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 196 ERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred hhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 84 78999999999999999999999998543
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.4e-21 Score=180.71 Aligned_cols=155 Identities=17% Similarity=0.193 Sum_probs=109.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc-----cccCCcccCcccccCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-----YSTNLAFTPPEYLRTG 76 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~y~aPE~~~~~ 76 (340)
+|.....++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....... ...++.|++||.+...
T Consensus 307 ~~~~~~~i~~ql~~aL~~lH~~~-ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~ 385 (507)
T PLN03224 307 DINVIKGVMRQVLTGLRKLHRIG-IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMP 385 (507)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC-eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCC
Confidence 56778899999999999999999 99999999999999999999999999876543321 1237899999987532
Q ss_pred CC----------------------CCCcceehHHHHHHHHhhCCC-CCCcchh--HHHhh--h---hhccccccccCCCC
Q 019495 77 RV----------------------TPESVIYSFGTLLLDLLSGKH-IPPSHAL--DLIRD--R---NLQMLTDSCLEGQF 126 (340)
Q Consensus 77 ~~----------------------~~~~Di~s~G~il~el~~g~~-~~~~~~~--~~~~~--~---~~~~~~~~~~~~~~ 126 (340)
.. ..+.|+||+||++++|++|.. |+..... ..... . ...........-..
T Consensus 386 ~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~ 465 (507)
T PLN03224 386 QSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSL 465 (507)
T ss_pred CCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCccc
Confidence 21 124699999999999999875 3322110 00000 0 00011111111112
Q ss_pred CchhHHHHHHHHHHhhccCC---CCCCCHHHHHH
Q 019495 127 TDDDGTELVRLASRCLQYEP---RERPNPKSLVT 157 (340)
Q Consensus 127 ~~~~~~~l~~li~~cl~~~p---~~Rps~~~i~~ 157 (340)
....+....+++.+++..+| .+|+|+.+++.
T Consensus 466 ~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 466 LDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred ccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 33456889999999999866 68999999985
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-21 Score=191.74 Aligned_cols=92 Identities=15% Similarity=0.125 Sum_probs=68.8
Q ss_pred cCCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhh
Q 019495 63 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 142 (340)
Q Consensus 63 ~~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 142 (340)
||+.|+|||++.+..++.++|||||||++|||++|+.||............+.... ........++..+.+++.+||
T Consensus 542 GT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~---~~p~~~~~~~~~~~~~l~~lL 618 (669)
T cd05610 542 GTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDI---PWPEGEEKLSVNAQNAIEILL 618 (669)
T ss_pred eCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCC---CCCcccccCCHHHHHHHHHHc
Confidence 36789999999988899999999999999999999999876543332222211111 011112244577899999999
Q ss_pred ccCCCCCCCHHHHHH
Q 019495 143 QYEPRERPNPKSLVT 157 (340)
Q Consensus 143 ~~~p~~Rps~~~i~~ 157 (340)
..||.+||++.+++.
T Consensus 619 ~~dP~~R~ta~e~l~ 633 (669)
T cd05610 619 TMDPTKRAGLKELKQ 633 (669)
T ss_pred ccChhHCcCHHHHHh
Confidence 999999999999986
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.9e-22 Score=185.38 Aligned_cols=152 Identities=14% Similarity=0.230 Sum_probs=121.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccC-
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRT- 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~- 75 (340)
|.|....-|++.++.||.+||.+. +||||||..|||++.+|.||++|||++.....+ .+.+||+.|||||++..
T Consensus 120 l~E~~IaYI~re~lrgl~HLH~nk-viHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~ 198 (953)
T KOG0587|consen 120 LKEEWIAYILREILRGLAHLHNNK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACD 198 (953)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhcc-eeeecccCceEEEeccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecc
Confidence 567888889999999999999998 999999999999999999999999998765443 46789999999999964
Q ss_pred ----CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccc-cccccCCCCCchhHHHHHHHHHHhhccCCCCCC
Q 019495 76 ----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML-TDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150 (340)
Q Consensus 76 ----~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 150 (340)
..|+..+|+||||++..||..|.+|+.+.-. ...+-.+ ..|.....-|..-+.++.++|..|+..|-.+||
T Consensus 199 e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP----mraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP 274 (953)
T KOG0587|consen 199 ESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP----MRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRP 274 (953)
T ss_pred cCCCCCcccccchhhccceeehhcCCCCCccCcch----hhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCc
Confidence 2478899999999999999999877654311 1111111 112222233556678999999999999999999
Q ss_pred CHHHHHH
Q 019495 151 NPKSLVT 157 (340)
Q Consensus 151 s~~~i~~ 157 (340)
++.+++.
T Consensus 275 ~~~~ll~ 281 (953)
T KOG0587|consen 275 STEELLK 281 (953)
T ss_pred chhhhcc
Confidence 9998874
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-22 Score=180.70 Aligned_cols=148 Identities=20% Similarity=0.226 Sum_probs=117.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCC---CCeEEeccCCCccCCCC---CccccCCcccCcccccC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~---~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~ 75 (340)
++...--++.||+.||.|||-++ |+|+||||+|||+.+. -.+||||||+++.++.. .+.+||+.|+|||+++.
T Consensus 662 ~er~TkFlvtQIL~ALr~LH~kn-IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrn 740 (888)
T KOG4236|consen 662 PERITKFLVTQILVALRYLHFKN-IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRN 740 (888)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcc-eeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcCCccccCHHHHhh
Confidence 34444457899999999999999 9999999999999643 35999999999988765 36789999999999999
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcch--hHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHA--LDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
..|+..-|+||.|||+|--++|..||..+. .+.+.+..+. +++.....++....++|...|+..-.+|-|..
T Consensus 741 kGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFM------yPp~PW~eis~~AidlIn~LLqVkm~kRysvd 814 (888)
T KOG4236|consen 741 KGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFM------YPPNPWSEISPEAIDLINNLLQVKMRKRYSVD 814 (888)
T ss_pred ccccccccceeeeEEEEEEecccccCCCccchhHHhhccccc------cCCCchhhcCHHHHHHHHHHHHHHHHHhcchH
Confidence 999999999999999999999998886541 1122221111 12233445678899999999999999998887
Q ss_pred HHH
Q 019495 154 SLV 156 (340)
Q Consensus 154 ~i~ 156 (340)
..+
T Consensus 815 k~l 817 (888)
T KOG4236|consen 815 KSL 817 (888)
T ss_pred hhc
Confidence 655
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-21 Score=163.60 Aligned_cols=155 Identities=19% Similarity=0.206 Sum_probs=111.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC---CeEEeccCCCccCCCC-----------CccccCCcc
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG---NPRLSTFGLMKNSRDG-----------KSYSTNLAF 67 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~---~~kl~dfg~~~~~~~~-----------~~~~~~~~y 67 (340)
++.+.-++..+|+.||.|||.+| |.||||||+|||..+.. .||||||.+.....-. .+-+|+-.|
T Consensus 174 ~E~EAs~vvkdia~aLdFlH~kg-IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEf 252 (463)
T KOG0607|consen 174 NEREASRVVKDIASALDFLHTKG-IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEF 252 (463)
T ss_pred cHHHHHHHHHHHHHHHHHHhhcC-cccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhh
Confidence 45567789999999999999999 99999999999986544 3899999765432211 123566789
Q ss_pred cCccccc---C--CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHh--h---------hhhccccccc--cCCCCCch
Q 019495 68 TPPEYLR---T--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR--D---------RNLQMLTDSC--LEGQFTDD 129 (340)
Q Consensus 68 ~aPE~~~---~--~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~--~---------~~~~~~~~~~--~~~~~~~~ 129 (340)
||||+.. + ..|+.++|.||||||+|-|++|-+||.+.....-. . ..+..+.+.. ++..-...
T Consensus 253 MAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWah 332 (463)
T KOG0607|consen 253 MAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAH 332 (463)
T ss_pred cchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHH
Confidence 9999763 2 35899999999999999999999999664221111 1 1111111111 11111233
Q ss_pred hHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 130 DGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 130 ~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
++.+..+++...+..|+.+|.++.+++.
T Consensus 333 IS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 333 ISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred hhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 6788999999999999999999888764
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.2e-22 Score=175.31 Aligned_cols=101 Identities=22% Similarity=0.263 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCC-CCeEEeccCCCccCCCCC--ccccCCcccCcccccCCCCC
Q 019495 3 WAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSRDGK--SYSTNLAFTPPEYLRTGRVT 79 (340)
Q Consensus 3 ~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~-~~~kl~dfg~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~ 79 (340)
.+.+-.++.|+.-||..|-..| |+|.||||.|||+++. ..+||||||.+...+... .+.-+..|.|||.+.|.+|+
T Consensus 535 ikaVRsYaqQLflALklLK~c~-vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd 613 (752)
T KOG0670|consen 535 IKAVRSYAQQLFLALKLLKKCG-VLHADIKPDNILVNESKNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYD 613 (752)
T ss_pred ehHHHHHHHHHHHHHHHHHhcC-eeecccCccceEeccCcceeeeccCccccccccccccHHHHHHhccCcceeecCccc
Confidence 3456678999999999999999 9999999999999865 458999999987766543 23446789999999999999
Q ss_pred CCcceehHHHHHHHHhhCCCCCCcc
Q 019495 80 PESVIYSFGTLLLDLLSGKHIPPSH 104 (340)
Q Consensus 80 ~~~Di~s~G~il~el~~g~~~~~~~ 104 (340)
...|+||.||+||||+||+..|++.
T Consensus 614 ~~iD~WSvgctLYElYtGkIlFpG~ 638 (752)
T KOG0670|consen 614 YPIDTWSVGCTLYELYTGKILFPGR 638 (752)
T ss_pred CCccceeeceeeEEeeccceecCCC
Confidence 9999999999999999999988874
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.3e-21 Score=175.42 Aligned_cols=140 Identities=21% Similarity=0.276 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCC---------C--------------------
Q 019495 7 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR---------D-------------------- 57 (340)
Q Consensus 7 ~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~---------~-------------------- 57 (340)
--++.++.+|+++.|..| +|||||||+|||||.+|++||.|||+..... .
T Consensus 732 RFYIAEltcAiesVHkmG-FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~ 810 (1034)
T KOG0608|consen 732 RFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISK 810 (1034)
T ss_pred HHHHHHHHHHHHHHHhcc-ceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccc
Confidence 346889999999999999 9999999999999999999999999865321 0
Q ss_pred -----------------CCccccCCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccc
Q 019495 58 -----------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 120 (340)
Q Consensus 58 -----------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 120 (340)
..+.+||+.|+|||++....++..+|.||.|||||||+.|+.||............... ..
T Consensus 811 ~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw--~~ 888 (1034)
T KOG0608|consen 811 CLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINW--RN 888 (1034)
T ss_pred cchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeeh--hh
Confidence 01235789999999999888999999999999999999999999765443222111110 11
Q ss_pred ccCCCCCchhHHHHHHHHHHhhccCCCCCC
Q 019495 121 CLEGQFTDDDGTELVRLASRCLQYEPRERP 150 (340)
Q Consensus 121 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 150 (340)
.+.-.+....+.++.++|.+.+ .+++.|.
T Consensus 889 ~l~~~~~~~ls~e~~~li~kLc-~sad~RL 917 (1034)
T KOG0608|consen 889 FLHIPYQGNLSKEALDLIQKLC-CSADSRL 917 (1034)
T ss_pred ccccccccccCHHHHHHHHHHh-cChhhhh
Confidence 1111222334567777776543 3566674
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.7e-20 Score=164.57 Aligned_cols=165 Identities=17% Similarity=0.218 Sum_probs=119.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhC-----C--CccccCCCCCCEEecCCCCeEEeccCCCccCCCC--------CccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSK-----G--RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--------KSYSTNL 65 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~-----~--~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--------~~~~~~~ 65 (340)
|+-...++++..+++||++||.. | -|.|||||+.|||+.++|.+-|+|+|++...... ...+||.
T Consensus 305 v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTK 384 (513)
T KOG2052|consen 305 VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTK 384 (513)
T ss_pred CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCcccee
Confidence 35567899999999999999952 2 3999999999999999999999999999765543 2347899
Q ss_pred cccCcccccCCC------CCCCcceehHHHHHHHHhhC----------CCCCCcchh-----HHHhhhhhccccccccCC
Q 019495 66 AFTPPEYLRTGR------VTPESVIYSFGTLLLDLLSG----------KHIPPSHAL-----DLIRDRNLQMLTDSCLEG 124 (340)
Q Consensus 66 ~y~aPE~~~~~~------~~~~~Di~s~G~il~el~~g----------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 124 (340)
+|||||++...- .-..+||||||.|+||+.-. +.||.+... +.+..-....-..|.++.
T Consensus 385 RYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipn 464 (513)
T KOG2052|consen 385 RYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPN 464 (513)
T ss_pred eccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCc
Confidence 999999997531 12369999999999999752 234433221 222211111111122222
Q ss_pred C-CCchhHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccccC
Q 019495 125 Q-FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 165 (340)
Q Consensus 125 ~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 165 (340)
. ...++-..+.++|+.||..+|..|.|+=.|...|.++...
T Consensus 465 rW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~ 506 (513)
T KOG2052|consen 465 RWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNS 506 (513)
T ss_pred ccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcC
Confidence 2 2344668899999999999999999999999888887643
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.3e-20 Score=150.66 Aligned_cols=150 Identities=23% Similarity=0.330 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC-CeEEeccCCCccCCCCCcc---ccCCcccCcccccC-CCCCCC
Q 019495 7 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDGKSY---STNLAFTPPEYLRT-GRVTPE 81 (340)
Q Consensus 7 ~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~-~~kl~dfg~~~~~~~~~~~---~~~~~y~aPE~~~~-~~~~~~ 81 (340)
.-++.+++.||.|+|+.| |+|||+||.|++||... .++++|+|++....++... +.+..|--||.+.. ..++-+
T Consensus 135 ryY~~elLkALdyCHS~G-ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYS 213 (338)
T KOG0668|consen 135 RYYIYELLKALDYCHSMG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYS 213 (338)
T ss_pred HHHHHHHHHHHhHHHhcC-cccccCCcceeeechhhceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhcccc
Confidence 346899999999999999 99999999999999754 5999999999988777543 45778899999976 457888
Q ss_pred cceehHHHHHHHHhhCCCCCCcc-h-hHH-------Hhhhh-------hcccccccc----------------CCCCCch
Q 019495 82 SVIYSFGTLLLDLLSGKHIPPSH-A-LDL-------IRDRN-------LQMLTDSCL----------------EGQFTDD 129 (340)
Q Consensus 82 ~Di~s~G~il~el~~g~~~~~~~-~-~~~-------~~~~~-------~~~~~~~~~----------------~~~~~~~ 129 (340)
-|+|||||++..|+..+.||.-. . .+. +.... .....++.+ ...-..-
T Consensus 214 LD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl 293 (338)
T KOG0668|consen 214 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHL 293 (338)
T ss_pred HHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCcccccc
Confidence 99999999999999999887431 0 000 00000 000011111 0111111
Q ss_pred hHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 130 DGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 130 ~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.+++..+++.+.|..|-.+|+|+.|.+.
T Consensus 294 ~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 294 VSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred CChHHHHHHHHHHhhccccccchHHHhc
Confidence 3578999999999999999999999874
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.80 E-value=2e-19 Score=150.30 Aligned_cols=120 Identities=33% Similarity=0.524 Sum_probs=106.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC-CCCeEEeccCCCccCCCC----CccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~-~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~ 75 (340)
+++..+..++.+++.++.|||+.+ ++|+||+|.||+++. ++.++++|||.+...... ....+...|++||.+..
T Consensus 89 ~~~~~~~~~~~~l~~~l~~lh~~~-~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~ 167 (215)
T cd00180 89 LSEDEILRILLQILEGLEYLHSNG-IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLG 167 (215)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCccChhHhcc
Confidence 367788999999999999999999 999999999999998 899999999998765543 23456788999999987
Q ss_pred C-CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 G-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
. ..+.++|+|++|++++++ ..+.+++.+|++.+|++||++.+
T Consensus 168 ~~~~~~~~D~~~lg~~~~~l-------------------------------------~~~~~~l~~~l~~~p~~R~~~~~ 210 (215)
T cd00180 168 KGYYSEKSDIWSLGVILYEL-------------------------------------PELKDLIRKMLQKDPEKRPSAKE 210 (215)
T ss_pred cCCCCchhhhHHHHHHHHHH-------------------------------------HHHHHHHHHHhhCCcccCcCHHH
Confidence 6 778899999999999998 46889999999999999999999
Q ss_pred HHHH
Q 019495 155 LVTA 158 (340)
Q Consensus 155 i~~~ 158 (340)
++..
T Consensus 211 l~~~ 214 (215)
T cd00180 211 ILEH 214 (215)
T ss_pred HhhC
Confidence 8753
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.5e-20 Score=150.54 Aligned_cols=152 Identities=21% Similarity=0.237 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEec--CCCCeEEeccCCCccCCCCCcc-ccCCcccCcccccC---C--
Q 019495 5 MRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDGNPRLSTFGLMKNSRDGKSY-STNLAFTPPEYLRT---G-- 76 (340)
Q Consensus 5 ~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~--~~~~~kl~dfg~~~~~~~~~~~-~~~~~y~aPE~~~~---~-- 76 (340)
..-+++.|+++|+.|+|+++ +||||||.+||||- +..++||||||..+..+..... ..+..|.+||+... +
T Consensus 122 ~~K~v~~ql~SAi~fMHskn-lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~ 200 (378)
T KOG1345|consen 122 NTKKVFAQLLSAIEFMHSKN-LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKL 200 (378)
T ss_pred HHHHHHHHHHHHHHHhhccc-hhhcccccceEEEecCCccEEEeeecccccccCceehhhhhhcccCCcHHHhhccccce
Confidence 44578999999999999999 99999999999983 4457999999998766554333 34678999997753 2
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchh---HHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHAL---DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
...+.+|+|.||++++.++||..|+.-... .-........-..+..+ ..-...++.+..+.++-+..+|++|.-..
T Consensus 201 ~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P-~~F~~fs~~a~r~Fkk~lt~~~~drcki~ 279 (378)
T KOG1345|consen 201 VVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALP-KKFNPFSEKALRLFKKSLTPRFKDRCKIW 279 (378)
T ss_pred EecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCc-hhhcccCHHHHHHHHHhcCCcccccchhH
Confidence 357889999999999999999977632110 00111111111111111 11223457788999999999999996665
Q ss_pred HHHHH
Q 019495 154 SLVTA 158 (340)
Q Consensus 154 ~i~~~ 158 (340)
++...
T Consensus 280 ~~kk~ 284 (378)
T KOG1345|consen 280 TAKKM 284 (378)
T ss_pred HHHHH
Confidence 55543
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-19 Score=149.70 Aligned_cols=154 Identities=18% Similarity=0.216 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccc-CCCCCCEEecCCCCeEEe--ccCCCccCCCCCccccCCcccCcccccCCCC-
Q 019495 3 WAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLS--TFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV- 78 (340)
Q Consensus 3 ~~~~~~i~~qi~~~l~ylH~~~~iiH~-dlk~~nill~~~~~~kl~--dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~- 78 (340)
-.+.++++.+|+.|++|||+..++|-| .|++..|++|++-+.+|+ |--++. ........+.||+||.++..+-
T Consensus 288 ~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsf---qe~gr~y~pawmspealqrkped 364 (448)
T KOG0195|consen 288 HSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSF---QEVGRAYSPAWMSPEALQRKPED 364 (448)
T ss_pred cchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeee---eccccccCcccCCHHHHhcCchh
Confidence 457899999999999999998778888 799999999999887665 322221 1222334689999999986542
Q ss_pred --CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 79 --TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 79 --~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
-.++|+|||++++|||.|...||.+........... -..++..+|+.++..+.+++.-|++.||.+||.+..|+
T Consensus 365 ~n~raadmwsfaillwel~trevpfadlspmecgmkia----leglrv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 365 LNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA----LEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred cchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh----hccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 347999999999999999999998876655543332 23456678888999999999999999999999999999
Q ss_pred HHhcccc
Q 019495 157 TALSPLQ 163 (340)
Q Consensus 157 ~~L~~~~ 163 (340)
-.|+++.
T Consensus 441 pilekm~ 447 (448)
T KOG0195|consen 441 PILEKMI 447 (448)
T ss_pred hhHHHhc
Confidence 9888763
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.6e-18 Score=158.32 Aligned_cols=192 Identities=20% Similarity=0.271 Sum_probs=138.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC------CCccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------GKSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~------~~~~~~~~~y~aPE~~~ 74 (340)
|+|.++..++++|+.||.|+|...-..|+.++++|+++|..+.+|++|||+...... .........|.|||.++
T Consensus 45 ~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr 124 (484)
T KOG1023|consen 45 LDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLR 124 (484)
T ss_pred ccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhc
Confidence 588999999999999999999987239999999999999999999999999766532 11223356799999998
Q ss_pred CC-------CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccc---cccccCCCCC-c-hhHHHHHHHHHHhh
Q 019495 75 TG-------RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML---TDSCLEGQFT-D-DDGTELVRLASRCL 142 (340)
Q Consensus 75 ~~-------~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~-~~~~~l~~li~~cl 142 (340)
+. ..+.++|+||||++++|+++.+.||............+..+ ....+++.+. . ...+.+..++..||
T Consensus 125 ~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw 204 (484)
T KOG1023|consen 125 GALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCW 204 (484)
T ss_pred ccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhc
Confidence 63 14778999999999999999999886532211111111111 1112222222 1 33457999999999
Q ss_pred ccCCCCCCCHHHHHHHhcccccCCCCCcccccCCCCCCCCCCCCCCCCccccchhhHHHHHHHHhccCCchhhh
Q 019495 143 QYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVA 216 (340)
Q Consensus 143 ~~~p~~Rps~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (340)
..+|..||++..|...++.+..... ...+.+..+...++++....+..+.
T Consensus 205 ~e~P~~rPs~~~i~~~~~~~~~~~~------------------------~~~nl~D~m~~~le~Y~~nLe~~v~ 254 (484)
T KOG1023|consen 205 EEIPEKRPSIEQIRSKLLTINKGGS------------------------SKGNLMDSLFRMLESYADNLEKLVD 254 (484)
T ss_pred ccChhhCccHHHHHhhhhhhccccc------------------------ccchhHHHHHHHHHHHHhhhHHHHH
Confidence 9999999999999988877644321 0224566778888887766666665
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.7e-18 Score=151.17 Aligned_cols=156 Identities=24% Similarity=0.294 Sum_probs=111.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEec-CCCCeEEeccCCCccC-----------------CC--C--
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNS-----------------RD--G-- 58 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~-~~~~~kl~dfg~~~~~-----------------~~--~-- 58 (340)
++......+++.++.||.++|++| ||||||||+|++.+ ..+.-.|+|||++... .+ +
T Consensus 129 l~~~~i~~Yl~~ll~Al~~~h~~G-IvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~ 207 (418)
T KOG1167|consen 129 LSLAEIRWYLRNLLKALAHLHKNG-IVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKD 207 (418)
T ss_pred CCHHHHHHHHHHHHHHhhhhhccC-ccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCc
Confidence 355677889999999999999999 99999999999997 4566789999997610 00 0
Q ss_pred ---------------------------CccccCCcccCcccccC-CCCCCCcceehHHHHHHHHhhCCCCCCcchh----
Q 019495 59 ---------------------------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL---- 106 (340)
Q Consensus 59 ---------------------------~~~~~~~~y~aPE~~~~-~~~~~~~Di~s~G~il~el~~g~~~~~~~~~---- 106 (340)
....||++|.|||++.. +..+++.||||.|||+..+++++.||.....
T Consensus 208 ~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~a 287 (418)
T KOG1167|consen 208 VHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADA 287 (418)
T ss_pred ccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccch
Confidence 01236899999999875 5678999999999999999999998743200
Q ss_pred ----------HHHhh-----h------------------hhccc-cccccC--------CCCCchhHHHHHHHHHHhhcc
Q 019495 107 ----------DLIRD-----R------------------NLQML-TDSCLE--------GQFTDDDGTELVRLASRCLQY 144 (340)
Q Consensus 107 ----------~~~~~-----~------------------~~~~~-~~~~~~--------~~~~~~~~~~l~~li~~cl~~ 144 (340)
..+.. + .+..+ ...... .......+..+.+++.+|+..
T Consensus 288 l~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~ 367 (418)
T KOG1167|consen 288 LAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLEL 367 (418)
T ss_pred HHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccC
Confidence 00000 0 00001 011111 111122345899999999999
Q ss_pred CCCCCCCHHHHHH
Q 019495 145 EPRERPNPKSLVT 157 (340)
Q Consensus 145 ~p~~Rps~~~i~~ 157 (340)
||.+|.|+++.+.
T Consensus 368 np~kRitAEeALk 380 (418)
T KOG1167|consen 368 NPQKRITAEDALK 380 (418)
T ss_pred ChhhcccHHHHhc
Confidence 9999999999874
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=3e-18 Score=157.20 Aligned_cols=153 Identities=18% Similarity=0.247 Sum_probs=116.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCC----CCCccccCCcccCcccc---c
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----DGKSYSTNLAFTPPEYL---R 74 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~----~~~~~~~~~~y~aPE~~---~ 74 (340)
++-+.--++++.++||.|||+++ -+|||||..||++++.|.+|++|||.+-.++ ...++.||+.|||||+- +
T Consensus 110 selqiayvcRetl~gl~ylhs~g-k~hRdiKGanilltd~gDvklaDfgvsaqitati~KrksfiGtpywmapEvaaver 188 (829)
T KOG0576|consen 110 SELQIAYVCRETLQGLKYLHSQG-KIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVER 188 (829)
T ss_pred hhHHHHHHHhhhhccchhhhcCC-cccccccccceeecccCceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHh
Confidence 34455567889999999999999 8999999999999999999999999887654 34678999999999986 3
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCcc-hhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
.+.|...+|+|++|++..|+-.-++|.... ....+.-.......++.+.. +..-.+.+.++++.|+..+|++||+++
T Consensus 189 kggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkD--k~kws~~fh~fvK~altknpKkRptae 266 (829)
T KOG0576|consen 189 KGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKD--KTKWSEFFHNFVKGALTKNPKKRPTAE 266 (829)
T ss_pred cccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccC--CccchHHHHHHHHHHhcCCCccCCChh
Confidence 467899999999999999997777554322 11222222222222222221 223457899999999999999999998
Q ss_pred HHHH
Q 019495 154 SLVT 157 (340)
Q Consensus 154 ~i~~ 157 (340)
.++.
T Consensus 267 klL~ 270 (829)
T KOG0576|consen 267 KLLQ 270 (829)
T ss_pred hhee
Confidence 8764
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.5e-18 Score=156.84 Aligned_cols=101 Identities=16% Similarity=0.301 Sum_probs=90.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--CccccCCcccCcccccCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTGRV 78 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~~ 78 (340)
|++.+.--|+.||+-|+++||++| |||||||-+||.++.+|.+|++|||.+.....+ ..+.||..|.|||++.|.+|
T Consensus 667 m~E~eAk~IFkQV~agi~hlh~~~-ivhrdikdenvivd~~g~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y 745 (772)
T KOG1152|consen 667 MDEPEAKLIFKQVVAGIKHLHDQG-IVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKY 745 (772)
T ss_pred cchHHHHHHHHHHHhccccccccC-ceecccccccEEEecCCeEEEeeccchhhhcCCCcceeeeeccccchhhhCCCcc
Confidence 456677789999999999999999 999999999999999999999999998765544 57899999999999998775
Q ss_pred -CCCcceehHHHHHHHHhhCCCCCC
Q 019495 79 -TPESVIYSFGTLLLDLLSGKHIPP 102 (340)
Q Consensus 79 -~~~~Di~s~G~il~el~~g~~~~~ 102 (340)
+..-|||++|+++|.++....|+.
T Consensus 746 ~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 746 LGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred CCCcchhhhhhheeeEEEeccCCCc
Confidence 667899999999999988777764
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.1e-17 Score=148.55 Aligned_cols=94 Identities=16% Similarity=0.337 Sum_probs=67.6
Q ss_pred CCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHH-----------------------Hhhhhhcccccc
Q 019495 64 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----------------------IRDRNLQMLTDS 120 (340)
Q Consensus 64 ~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~-----------------------~~~~~~~~~~~~ 120 (340)
|..|.+||++-+..|+..+||||++|+++||+||-..|....... +....-..+.+.
T Consensus 414 TRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr 493 (590)
T KOG1290|consen 414 TRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNR 493 (590)
T ss_pred hhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhcc
Confidence 566999999999999999999999999999999988774421100 000000111100
Q ss_pred c-----------------c--CCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 121 C-----------------L--EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 121 ~-----------------~--~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
. + .-.++.....++.+++.-||+.+|++|||+.+.+.
T Consensus 494 ~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~ 549 (590)
T KOG1290|consen 494 RGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLK 549 (590)
T ss_pred ccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhc
Confidence 0 0 11345566789999999999999999999999884
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.3e-17 Score=139.78 Aligned_cols=102 Identities=26% Similarity=0.330 Sum_probs=89.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-----CccccCCcccCcccc-c
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYL-R 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~-~ 74 (340)
+++.....++.+++.++.|||+.+ ++|+|++|.||+++.++.++++|||.+...... ....++..|++||.+ .
T Consensus 95 ~~~~~~~~~~~~l~~~l~~lh~~~-i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~ 173 (225)
T smart00221 95 LSEEEARFYLRQILEALEYLHSLG-IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLG 173 (225)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcC
Confidence 467788999999999999999998 999999999999999999999999988766544 334567889999998 5
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCc
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPS 103 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~ 103 (340)
...++.++|+|+||+++++|++|+.||..
T Consensus 174 ~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 174 GKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 56678899999999999999999999865
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.6e-18 Score=160.67 Aligned_cols=153 Identities=16% Similarity=0.142 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--------CccccCCcccCcccccC
Q 019495 4 AMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--------KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 4 ~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--------~~~~~~~~y~aPE~~~~ 75 (340)
..+-.++.|++.|+.|+|+.| +.|||+|++|+++..+|.+|++|||.+...... ....|+.+|+|||++.+
T Consensus 420 ~e~~c~fKqL~~Gv~y~h~~G-iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~ 498 (601)
T KOG0590|consen 420 LEADCFFKQLLRGVKYLHSMG-LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTG 498 (601)
T ss_pred hhhhHHHHHHHHHHHHHHhcC-ceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccc
Confidence 345568999999999999999 999999999999999999999999987654322 23467899999999998
Q ss_pred CCCCC-CcceehHHHHHHHHhhCCCCCCcchhHHH---hhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 76 GRVTP-ESVIYSFGTLLLDLLSGKHIPPSHALDLI---RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 76 ~~~~~-~~Di~s~G~il~el~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
..|.+ ..||||.|++++.|.+|+.|+-......- ............-...+....+.+.+.+|.++|+.+|.+|.+
T Consensus 499 ~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~t 578 (601)
T KOG0590|consen 499 KEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRIT 578 (601)
T ss_pred cccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheec
Confidence 87755 68999999999999999877532111100 000000000000011122335678899999999999999999
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.+|++
T Consensus 579 i~~i~~ 584 (601)
T KOG0590|consen 579 IEQILN 584 (601)
T ss_pred HHHHhh
Confidence 999986
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.4e-17 Score=139.93 Aligned_cols=153 Identities=16% Similarity=0.183 Sum_probs=113.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEe--cCCCC--eEEeccCCCccCCC----------CCccccCCcc
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF--DEDGN--PRLSTFGLMKNSRD----------GKSYSTNLAF 67 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill--~~~~~--~kl~dfg~~~~~~~----------~~~~~~~~~y 67 (340)
+.....-++.|+++|+.|||..| |.|||+|++|||+ |+|+. ++|+|||++--... ..+..|+-.-
T Consensus 339 s~r~~~~~laQlLEav~hL~~hg-vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~l 417 (598)
T KOG4158|consen 339 SYRTGRVILAQLLEAVTHLHKHG-VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKL 417 (598)
T ss_pred chHHHHHHHHHHHHHHHHHHHcc-chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCccee
Confidence 34566778999999999999999 9999999999998 55554 78999998643222 1233456778
Q ss_pred cCcccccCC--C----CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHh
Q 019495 68 TPPEYLRTG--R----VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 141 (340)
Q Consensus 68 ~aPE~~~~~--~----~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 141 (340)
||||+.... + .-.++|.|+.|.+.||+++...||.......+......+- ..+..|..+++.+.+++...
T Consensus 418 mAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~----qLPalp~~vpp~~rqlV~~l 493 (598)
T KOG4158|consen 418 MAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQES----QLPALPSRVPPVARQLVFDL 493 (598)
T ss_pred cchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhh----hCCCCcccCChHHHHHHHHH
Confidence 999998642 2 1348999999999999999999998743333322222221 12345667788999999999
Q ss_pred hccCCCCCCCHHHHHHHh
Q 019495 142 LQYEPRERPNPKSLVTAL 159 (340)
Q Consensus 142 l~~~p~~Rps~~~i~~~L 159 (340)
++.||.+|++..-....|
T Consensus 494 L~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 494 LKRDPSKRVSPNIAANVL 511 (598)
T ss_pred hcCCccccCCccHHHhHH
Confidence 999999999987665544
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.4e-17 Score=145.55 Aligned_cols=105 Identities=28% Similarity=0.407 Sum_probs=101.6
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
+...+.+|+.+|+.|+|..|+..|++||+.+|+ ++.+|.|||.||.+++.+..|++|++++++++|++..+|.+.|.++
T Consensus 358 A~e~r~kGne~Fk~gdy~~Av~~YteAIkr~P~-Da~lYsNRAac~~kL~~~~~aL~Da~~~ieL~p~~~kgy~RKg~al 436 (539)
T KOG0548|consen 358 AEEEREKGNEAFKKGDYPEAVKHYTEAIKRDPE-DARLYSNRAACYLKLGEYPEALKDAKKCIELDPNFIKAYLRKGAAL 436 (539)
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 667788899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHhhhccccccccc
Q 019495 311 SAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
+.+.+|+.|++.|++|+++||++.++
T Consensus 437 ~~mk~ydkAleay~eale~dp~~~e~ 462 (539)
T KOG0548|consen 437 RAMKEYDKALEAYQEALELDPSNAEA 462 (539)
T ss_pred HHHHHHHHHHHHHHHHHhcCchhHHH
Confidence 99999999999999999999998764
|
|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.5e-16 Score=125.14 Aligned_cols=103 Identities=16% Similarity=0.114 Sum_probs=98.9
Q ss_pred HHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHc
Q 019495 234 SKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAM 313 (340)
Q Consensus 234 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~ 313 (340)
+...|..++..|+|++|+..|++++..+|. +..++.++|.++...|++++|+..|+++++++|+++.+++++|.++..+
T Consensus 27 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~~~~a~~~lg~~l~~~ 105 (144)
T PRK15359 27 VYASGYASWQEGDYSRAVIDFSWLVMAQPW-SWRAHIALAGTWMMLKEYTTAINFYGHALMLDASHPEPVYQTGVCLKMM 105 (144)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHc
Confidence 556799999999999999999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHhhhcccccccccc
Q 019495 314 GMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 314 ~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
|++++|+++|+++++++|.+..++
T Consensus 106 g~~~eAi~~~~~Al~~~p~~~~~~ 129 (144)
T PRK15359 106 GEPGLAREAFQTAIKMSYADASWS 129 (144)
T ss_pred CCHHHHHHHHHHHHHhCCCChHHH
Confidence 999999999999999999987665
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-17 Score=144.09 Aligned_cols=135 Identities=21% Similarity=0.270 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc-cccCCcccCcccccCC------
Q 019495 4 AMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAFTPPEYLRTG------ 76 (340)
Q Consensus 4 ~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~y~aPE~~~~~------ 76 (340)
..++.+..|++..+++||+.| ++|+||+|+|++++.+|.+.|.||+.....+.... ...+..|.+||.....
T Consensus 145 ~arl~lT~Q~I~lvA~Lh~~G-lVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~ 223 (288)
T PF14531_consen 145 AARLSLTVQMIRLVANLHSYG-LVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQN 223 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT-EEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHS
T ss_pred HHHHHHHHHHHHHHHHHhhcc-eEecccceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcc
Confidence 356778899999999999999 99999999999999999999999987766554333 2345779999977432
Q ss_pred --CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCC
Q 019495 77 --RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 149 (340)
Q Consensus 77 --~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R 149 (340)
.++.+.|.|++|+++|.|++|+.||............+. ... +.+..++.||..+|+.+|.+|
T Consensus 224 ~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~~f~---------~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 224 NAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEWDFS---------RCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp EEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGGGGT---------TSS----HHHHHHHHHHT-SSGGGS
T ss_pred cceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccccch---------hcC-CcCHHHHHHHHHHccCCcccC
Confidence 468899999999999999999998865433222111111 112 556889999999999999988
|
|
| >KOG4234 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.9e-16 Score=125.14 Aligned_cols=114 Identities=18% Similarity=0.231 Sum_probs=106.2
Q ss_pred hhHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCc----chHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCch
Q 019495 225 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 300 (340)
Q Consensus 225 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 300 (340)
.+....+..++..||.+|++|+|++|...|+.||++-|.. ...+|.++|.|+++++.++.||++|.+||+++|++-
T Consensus 89 ~k~~~kad~lK~EGN~~F~ngdyeeA~skY~~Ale~cp~~~~e~rsIly~Nraaa~iKl~k~e~aI~dcsKaiel~pty~ 168 (271)
T KOG4234|consen 89 DKAIEKADSLKKEGNELFKNGDYEEANSKYQEALESCPSTSTEERSILYSNRAAALIKLRKWESAIEDCSKAIELNPTYE 168 (271)
T ss_pred HHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHhCccccHHHHHHHHhhhHHHHHHhhhHHHHHHHHHhhHhcCchhH
Confidence 3557788899999999999999999999999999999984 347899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHhhhccccccccccC
Q 019495 301 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 338 (340)
Q Consensus 301 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 338 (340)
+|+.++|.+|..+..|++|++.|++.+++||.+.+|.+
T Consensus 169 kAl~RRAeayek~ek~eealeDyKki~E~dPs~~ear~ 206 (271)
T KOG4234|consen 169 KALERRAEAYEKMEKYEEALEDYKKILESDPSRREARE 206 (271)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHhCcchHHHHH
Confidence 99999999999999999999999999999999887654
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.6e-16 Score=142.59 Aligned_cols=106 Identities=27% Similarity=0.389 Sum_probs=101.7
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
+..+..+||.+|..|+|+.|+.+|++||.++|. +..+|.|+..+|..+|+|++|++|..+.++++|+++++|.++|.++
T Consensus 2 a~e~k~kgnaa~s~~d~~~ai~~~t~ai~l~p~-nhvlySnrsaa~a~~~~~~~al~da~k~~~l~p~w~kgy~r~Gaa~ 80 (539)
T KOG0548|consen 2 AVELKEKGNAAFSSGDFETAIRLFTEAIMLSPT-NHVLYSNRSAAYASLGSYEKALKDATKTRRLNPDWAKGYSRKGAAL 80 (539)
T ss_pred hhHHHHHHHhhcccccHHHHHHHHHHHHccCCC-ccchhcchHHHHHHHhhHHHHHHHHHHHHhcCCchhhHHHHhHHHH
Confidence 356789999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHhhhcccccccccc
Q 019495 311 SAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
..+|+|++|+..|.++|+.||+|....
T Consensus 81 ~~lg~~~eA~~ay~~GL~~d~~n~~L~ 107 (539)
T KOG0548|consen 81 FGLGDYEEAILAYSEGLEKDPSNKQLK 107 (539)
T ss_pred HhcccHHHHHHHHHHHhhcCCchHHHH
Confidence 999999999999999999999987643
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.66 E-value=4e-17 Score=146.90 Aligned_cols=141 Identities=26% Similarity=0.431 Sum_probs=104.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----------CccccCCcccCcc
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----------KSYSTNLAFTPPE 71 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----------~~~~~~~~y~aPE 71 (340)
+|.....++.|++.|+.| ++ .+|||+||.||....+..+||.|||+....... +...||..||+||
T Consensus 357 s~s~~~~~~~q~~~~~~y---k~-~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPE 432 (516)
T KOG1033|consen 357 SLSLMLDIFKQIAPAVEY---KG-LIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPE 432 (516)
T ss_pred chhHHHHHHHhhccchhh---cc-chhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHH
Confidence 456778899999999999 88 999999999999999999999999987654322 2346899999999
Q ss_pred cccCCCCCCCcceehHHHHHHHHhhC-CCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC
Q 019495 72 YLRTGRVTPESVIYSFGTLLLDLLSG-KHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150 (340)
Q Consensus 72 ~~~~~~~~~~~Di~s~G~il~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 150 (340)
.+.+..|+.++||||||++++||+.- ...+ ........+.+..+++.+..+. +.-..++.+++.+.|.+||
T Consensus 433 Qi~g~~y~~kvdIyaLGlil~EL~~~f~T~~-------er~~t~~d~r~g~ip~~~~~d~-p~e~~ll~~lls~~p~~RP 504 (516)
T KOG1033|consen 433 QIRGQQYSEKVDIYALGLILAELLIQFSTQF-------ERIATLTDIRDGIIPPEFLQDY-PEEYTLLQQLLSPSPEERP 504 (516)
T ss_pred HHhhhhhhhhcchhhHHHHHHHHHHHhccHH-------HHHHhhhhhhcCCCChHHhhcC-cHHHHHHHHhcCCCcccCc
Confidence 99999999999999999999999972 1111 1111222222222221221111 3456899999999999999
Q ss_pred CHHH
Q 019495 151 NPKS 154 (340)
Q Consensus 151 s~~~ 154 (340)
++.+
T Consensus 505 ~~~~ 508 (516)
T KOG1033|consen 505 SAIE 508 (516)
T ss_pred hHHH
Confidence 4443
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.8e-16 Score=137.93 Aligned_cols=163 Identities=17% Similarity=0.194 Sum_probs=120.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCC-----CCeEEeccCCCc--cCC-C-----------CCccc
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-----GNPRLSTFGLMK--NSR-D-----------GKSYS 62 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~-----~~~kl~dfg~~~--~~~-~-----------~~~~~ 62 (340)
+-.+.++|+.|++.+|+++|+.| +|||||||.|++++.. ..+.+.|||+++ ... + ...+.
T Consensus 120 s~~T~l~ia~q~l~~l~~lH~~G-~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~r 198 (322)
T KOG1164|consen 120 SRKTVLRIAIQNLNALEDLHSKG-FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFR 198 (322)
T ss_pred CHhHHHHHHHHHHHHHHHHHhcC-cccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCC
Confidence 55788999999999999999999 9999999999999865 358999999998 311 1 11245
Q ss_pred cCCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhh
Q 019495 63 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 142 (340)
Q Consensus 63 ~~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 142 (340)
||..|+++.+..+...+.+.|+||++.++.++..|..|+........ ...+................+..+.++...+-
T Consensus 199 GT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (322)
T KOG1164|consen 199 GTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-KSKFEKDPRKLLTDRFGDLKPEEFAKILEYID 277 (322)
T ss_pred CccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-HHHHHHHhhhhccccccCCChHHHHHHHHHhh
Confidence 89999999999988999999999999999999999877644321111 11111111111111022234567888888888
Q ss_pred ccCCCCCCCHHHHHHHhcccccCC
Q 019495 143 QYEPRERPNPKSLVTALSPLQKET 166 (340)
Q Consensus 143 ~~~p~~Rps~~~i~~~L~~~~~~~ 166 (340)
..+...+|.+..+...|.......
T Consensus 278 ~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 278 SLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred ccCCcCCCCHHHHHHHHHHHHHhc
Confidence 899999999999998887765543
|
|
| >PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=8.2e-16 Score=138.93 Aligned_cols=104 Identities=24% Similarity=0.278 Sum_probs=99.8
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHH
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 312 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 312 (340)
.+..+|+.++..|+|++|++.|++||+++|+ +..+|.++|.+|..+|++++|+.++++|++++|+++.+|+++|.+|+.
T Consensus 4 ~l~~~a~~a~~~~~~~~Ai~~~~~Al~~~P~-~~~a~~~~a~~~~~~g~~~eAl~~~~~Al~l~P~~~~a~~~lg~~~~~ 82 (356)
T PLN03088 4 DLEDKAKEAFVDDDFALAVDLYTQAIDLDPN-NAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTACMK 82 (356)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH
Confidence 5778899999999999999999999999999 899999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHhhhcccccccccc
Q 019495 313 MGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 313 ~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
+|+|++|+..|++|++++|++..+.
T Consensus 83 lg~~~eA~~~~~~al~l~P~~~~~~ 107 (356)
T PLN03088 83 LEEYQTAKAALEKGASLAPGDSRFT 107 (356)
T ss_pred hCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999987543
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.1e-16 Score=153.98 Aligned_cols=135 Identities=19% Similarity=0.228 Sum_probs=110.5
Q ss_pred HHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC-------------------CCccccCCcccCccc
Q 019495 12 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-------------------GKSYSTNLAFTPPEY 72 (340)
Q Consensus 12 qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~-------------------~~~~~~~~~y~aPE~ 72 (340)
+++.+++|||+.+ |+|||+||+|.+|..-|++|+.|||+++.... .+..+||+.|.|||+
T Consensus 151 dmvla~Eylh~yg-ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeV 229 (1205)
T KOG0606|consen 151 DMVLAVEYLHSYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEV 229 (1205)
T ss_pred hhhHHhHhhccCC-eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhh
Confidence 3478999999999 99999999999999999999999999775321 122368999999999
Q ss_pred ccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC
Q 019495 73 LRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150 (340)
Q Consensus 73 ~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 150 (340)
+..+.|+...|.|++|+|+||.+.|..||.+++.+.+-...+...+. +.+. ....+++.++++.+.|+.+|..|.
T Consensus 230 ilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~--wpE~-dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 230 ILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE--WPEE-DEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred hhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcc--cccc-CcCCCHHHHHHHHHHHHhChHhhc
Confidence 99889999999999999999999999999998776665554443221 1111 344568899999999999999994
|
|
| >KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-15 Score=133.67 Aligned_cols=112 Identities=19% Similarity=0.256 Sum_probs=103.1
Q ss_pred hHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCc--------------chHHhhhhHHHHHhcCChHHHHHHHHH
Q 019495 226 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--------------SPTVYARRSLCYLMSDMPQDALNDAMQ 291 (340)
Q Consensus 226 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--------------~~~~~~~~~~~~~~~~~~~~A~~~~~~ 291 (340)
+++..+...+..|+.+|+.|+|..|+..|++|+..-... --.++.|+|.||+++++|.+|+..|++
T Consensus 203 e~l~~A~~~ke~Gn~~fK~gk~~~A~~~Yerav~~l~~~~~~~~ee~~~~~~~k~~~~lNlA~c~lKl~~~~~Ai~~c~k 282 (397)
T KOG0543|consen 203 ERLEAADRKKERGNVLFKEGKFKLAKKRYERAVSFLEYRRSFDEEEQKKAEALKLACHLNLAACYLKLKEYKEAIESCNK 282 (397)
T ss_pred HHHHHHHHHHHhhhHHHhhchHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHHHhhHHHHHHHhhhhHHHHHHHHHH
Confidence 588899999999999999999999999999998655431 126889999999999999999999999
Q ss_pred HhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 292 AQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 292 al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
+|.++|++.+|+|++|.+|..+|+|+.|+..|++|++++|+|+.+.
T Consensus 283 vLe~~~~N~KALyRrG~A~l~~~e~~~A~~df~ka~k~~P~Nka~~ 328 (397)
T KOG0543|consen 283 VLELDPNNVKALYRRGQALLALGEYDLARDDFQKALKLEPSNKAAR 328 (397)
T ss_pred HHhcCCCchhHHHHHHHHHHhhccHHHHHHHHHHHHHhCCCcHHHH
Confidence 9999999999999999999999999999999999999999997654
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.8e-16 Score=150.13 Aligned_cols=152 Identities=19% Similarity=0.266 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCC----CCCcc-------ccCCcccCcc
Q 019495 3 WAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----DGKSY-------STNLAFTPPE 71 (340)
Q Consensus 3 ~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~----~~~~~-------~~~~~y~aPE 71 (340)
.-++.-|+.|++.||.-+|..| |+|||||.+||||+.=..+.|+||...+..- +...+ .....|.|||
T Consensus 119 ~iEKkWiaFQLL~al~qcH~~g-VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPE 197 (1431)
T KOG1240|consen 119 LIEKKWIAFQLLKALSQCHKLG-VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPE 197 (1431)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC-ccccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChH
Confidence 3467779999999999999999 9999999999999877778899998766432 11111 2234699999
Q ss_pred cccCC----------C-CCCCcceehHHHHHHHHhhC-CCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHH
Q 019495 72 YLRTG----------R-VTPESVIYSFGTLLLDLLSG-KHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 139 (340)
Q Consensus 72 ~~~~~----------~-~~~~~Di~s~G~il~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 139 (340)
-+... + .+++.||||+||++.||++- +++|.-...-.++.+. ..........++. ..++.++.
T Consensus 198 RFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~--~~~~e~~Le~Ied---~~~Rnlil 272 (1431)
T KOG1240|consen 198 RFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGN--ADDPEQLLEKIED---VSLRNLIL 272 (1431)
T ss_pred hhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccC--ccCHHHHHHhCcC---ccHHHHHH
Confidence 77531 2 67899999999999999885 5555433222233222 1111111112222 46899999
Q ss_pred HhhccCCCCCCCHHHHHHHhc
Q 019495 140 RCLQYEPRERPNPKSLVTALS 160 (340)
Q Consensus 140 ~cl~~~p~~Rps~~~i~~~L~ 160 (340)
.|++.||.+|.++++.++.-+
T Consensus 273 ~Mi~rdPs~RlSAedyL~~yr 293 (1431)
T KOG1240|consen 273 SMIQRDPSKRLSAEDYLQKYR 293 (1431)
T ss_pred HHHccCchhccCHHHHHHhhh
Confidence 999999999999999987533
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.8e-15 Score=133.80 Aligned_cols=155 Identities=25% Similarity=0.298 Sum_probs=115.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC-CeEEeccCCCccCCCC----------CccccCCcccCc
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDG----------KSYSTNLAFTPP 70 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~-~~kl~dfg~~~~~~~~----------~~~~~~~~y~aP 70 (340)
+......++.|++.++.|+|+.+ ++|||+||+||+++..+ .++++|||.++..... ....++..|++|
T Consensus 99 ~~~~~~~~~~~~~~~l~~~H~~~-~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~p 177 (384)
T COG0515 99 SESEALFILAQILSALEYLHSKG-IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAP 177 (384)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCH
Confidence 45677889999999999999999 99999999999999988 6999999998744322 345688999999
Q ss_pred ccccC---CCCCCCcceehHHHHHHHHhhCCCCCCcchh---HHHhhhhhccccccccCCCCCc----hhHHHHHHHHHH
Q 019495 71 EYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL---DLIRDRNLQMLTDSCLEGQFTD----DDGTELVRLASR 140 (340)
Q Consensus 71 E~~~~---~~~~~~~Di~s~G~il~el~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~ 140 (340)
|.+.+ ...+...|+||+|++++++++|..|+..... .............+........ .....+.+++..
T Consensus 178 e~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (384)
T COG0515 178 EVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKK 257 (384)
T ss_pred HHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHH
Confidence 99987 4688899999999999999999988654432 1111111111111101111111 113578999999
Q ss_pred hhccCCCCCCCHHHHHH
Q 019495 141 CLQYEPRERPNPKSLVT 157 (340)
Q Consensus 141 cl~~~p~~Rps~~~i~~ 157 (340)
|+..+|..|.+......
T Consensus 258 ~~~~~~~~r~~~~~~~~ 274 (384)
T COG0515 258 LLAKDPKNRLSSSSDLS 274 (384)
T ss_pred HHhcCchhcCCHHHHhh
Confidence 99999999998887664
|
|
| >KOG4648 consensus Uncharacterized conserved protein, contains LRR repeats [Function unknown] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.6e-15 Score=129.27 Aligned_cols=111 Identities=23% Similarity=0.306 Sum_probs=104.5
Q ss_pred hHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHH
Q 019495 226 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 305 (340)
Q Consensus 226 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 305 (340)
+-+....++.++||.+|++|+|++||++|+.+|..+|. ++.++.++|.+|+++.+|..|-.||+.|+.+|-.+.+||-+
T Consensus 92 ~LL~~~SEiKE~GN~yFKQgKy~EAIDCYs~~ia~~P~-NpV~~~NRA~AYlk~K~FA~AE~DC~~AiaLd~~Y~KAYSR 170 (536)
T KOG4648|consen 92 QLLKKASEIKERGNTYFKQGKYEEAIDCYSTAIAVYPH-NPVYHINRALAYLKQKSFAQAEEDCEAAIALDKLYVKAYSR 170 (536)
T ss_pred HHHHhhHHHHHhhhhhhhccchhHHHHHhhhhhccCCC-CccchhhHHHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHH
Confidence 44566677899999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 306 QAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 306 ~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
+|.+-..+|+.+||.++++.+|+|+|++.+.+
T Consensus 171 R~~AR~~Lg~~~EAKkD~E~vL~LEP~~~ELk 202 (536)
T KOG4648|consen 171 RMQARESLGNNMEAKKDCETVLALEPKNIELK 202 (536)
T ss_pred HHHHHHHHhhHHHHHHhHHHHHhhCcccHHHH
Confidence 99999999999999999999999999976543
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.1e-15 Score=131.43 Aligned_cols=99 Identities=26% Similarity=0.377 Sum_probs=95.1
Q ss_pred hhHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHH
Q 019495 225 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 304 (340)
Q Consensus 225 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 304 (340)
+++.+.+..++.+||.+|.+|+|++||++|++||++.|+ .+..|.|++.||..+|++.+.++++.+||+++|+++++++
T Consensus 109 e~~~k~A~~lK~~GN~~f~~kkY~eAIkyY~~AI~l~p~-epiFYsNraAcY~~lgd~~~Vied~TkALEl~P~Y~KAl~ 187 (606)
T KOG0547|consen 109 EERLKYAAALKTKGNKFFRNKKYDEAIKYYTQAIELCPD-EPIFYSNRAACYESLGDWEKVIEDCTKALELNPDYVKALL 187 (606)
T ss_pred HHHHHHHHHHHhhhhhhhhcccHHHHHHHHHHHHhcCCC-CchhhhhHHHHHHHHhhHHHHHHHHHHHhhcCcHHHHHHH
Confidence 467888999999999999999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCChHHHHHHHH
Q 019495 305 LQAAALSAMGMENEAQVALK 324 (340)
Q Consensus 305 ~~g~~~~~~~~~~~A~~~~~ 324 (340)
+|+.++..+|++++|+.++.
T Consensus 188 RRA~A~E~lg~~~eal~D~t 207 (606)
T KOG0547|consen 188 RRASAHEQLGKFDEALFDVT 207 (606)
T ss_pred HHHHHHHhhccHHHHHHhhh
Confidence 99999999999999998764
|
|
| >PRK15363 pathogenicity island 2 chaperone protein SscA; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.4e-14 Score=110.94 Aligned_cols=101 Identities=16% Similarity=-0.012 Sum_probs=97.6
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
+.++.....|..++..|++++|.+.|+-++..+|. +..+|+++|.|+..+|+|.+||..|.+|+.++|+++.++++.|.
T Consensus 33 ~~l~~lY~~A~~ly~~G~l~~A~~~f~~L~~~Dp~-~~~y~~gLG~~~Q~~g~~~~AI~aY~~A~~L~~ddp~~~~~ag~ 111 (157)
T PRK15363 33 QPLNTLYRYAMQLMEVKEFAGAARLFQLLTIYDAW-SFDYWFRLGECCQAQKHWGEAIYAYGRAAQIKIDAPQAPWAAAE 111 (157)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHH
Confidence 45668889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHhhhccc
Q 019495 309 ALSAMGMENEAQVALKEGTTLE 330 (340)
Q Consensus 309 ~~~~~~~~~~A~~~~~~al~l~ 330 (340)
|+..+|+.++|.++|+.|+..-
T Consensus 112 c~L~lG~~~~A~~aF~~Ai~~~ 133 (157)
T PRK15363 112 CYLACDNVCYAIKALKAVVRIC 133 (157)
T ss_pred HHHHcCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999887
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.6e-15 Score=139.28 Aligned_cols=132 Identities=23% Similarity=0.312 Sum_probs=109.6
Q ss_pred HHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCccccCCcccCcccccCCCCCCCcceehH
Q 019495 8 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSF 87 (340)
Q Consensus 8 ~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~ 87 (340)
-+...++-+++++|+.+ ++|||+|++||+++.+|++++.|||.++..-..+..+||..|||||++. ......|.|||
T Consensus 101 ~~~aelaLald~lh~l~-iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~eymApEI~~--gh~~a~D~ws~ 177 (612)
T KOG0603|consen 101 FYLAELALALDHLHKLG-IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYEYRAPEIIN--GHLSAADWWSF 177 (612)
T ss_pred HHHHHHHHHHhhcchhH-HHHhcccccceeecccCccccCCchhhhHhHhhhhcccchhhhhhHhhh--ccCCcccchhh
Confidence 35667888999999999 9999999999999999999999999999877776669999999999998 45678999999
Q ss_pred HHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 88 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 88 G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
|++.++|+||..||....... ... .....|......+.+++..++..+|.+|...
T Consensus 178 gvl~felltg~~pf~~~~~~~----Il~------~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 178 GVLAFELLTGTLPFGGDTMKR----ILK------AELEMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred hhhHHHHhhCCCCCchHHHHH----Hhh------hccCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 999999999999887622111 111 1223566677889999999999999999654
|
|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=6.5e-14 Score=123.82 Aligned_cols=105 Identities=12% Similarity=-0.035 Sum_probs=100.7
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
..+..++++|..+...|++++|+..|+++++++|+ ++.+|+++|.++...|++++|++.|+++++++|++..+|+++|.
T Consensus 62 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~ 140 (296)
T PRK11189 62 ERAQLHYERGVLYDSLGLRALARNDFSQALALRPD-MADAYNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAYLNRGI 140 (296)
T ss_pred hhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 44567899999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHhhhccccccc
Q 019495 309 ALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 309 ~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
+++..|++++|++.|+++++++|++.
T Consensus 141 ~l~~~g~~~eA~~~~~~al~~~P~~~ 166 (296)
T PRK11189 141 ALYYGGRYELAQDDLLAFYQDDPNDP 166 (296)
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999875
|
|
| >TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.3e-14 Score=109.24 Aligned_cols=108 Identities=13% Similarity=0.125 Sum_probs=101.6
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
.+.......|..++..|++++|+..|+++++.+|. +...+.++|.++...|++.+|+..++++++++|+++..++.+|.
T Consensus 15 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~ 93 (135)
T TIGR02552 15 EQLEQIYALAYNLYQQGRYDEALKLFQLLAAYDPY-NSRYWLGLAACCQMLKEYEEAIDAYALAAALDPDDPRPYFHAAE 93 (135)
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHH
Confidence 34556788999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 309 ALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 309 ~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
++..+|++++|+..|+++++++|++...+
T Consensus 94 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 122 (135)
T TIGR02552 94 CLLALGEPESALKALDLAIEICGENPEYS 122 (135)
T ss_pred HHHHcCCHHHHHHHHHHHHHhccccchHH
Confidence 99999999999999999999999987643
|
ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array. |
| >KOG1125 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.5e-13 Score=123.26 Aligned_cols=107 Identities=13% Similarity=0.161 Sum_probs=99.4
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
..-....|-.++-.|+|+.|+++|+.||...|+ +..+|+++|..+....+..+||+.|.+||++.|+++.+.|++|+.+
T Consensus 430 pdvQ~~LGVLy~ls~efdraiDcf~~AL~v~Pn-d~~lWNRLGAtLAN~~~s~EAIsAY~rALqLqP~yVR~RyNlgIS~ 508 (579)
T KOG1125|consen 430 PDVQSGLGVLYNLSGEFDRAVDCFEAALQVKPN-DYLLWNRLGATLANGNRSEEAISAYNRALQLQPGYVRVRYNLGISC 508 (579)
T ss_pred hhHHhhhHHHHhcchHHHHHHHHHHHHHhcCCc-hHHHHHHhhHHhcCCcccHHHHHHHHHHHhcCCCeeeeehhhhhhh
Confidence 444567788899999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHhhhccccccccccC
Q 019495 311 SAMGMENEAQVALKEGTTLEAKKNSTAG 338 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~~~~~~~ 338 (340)
..+|.|+||+++|-.||.+.++..+..+
T Consensus 509 mNlG~ykEA~~hlL~AL~mq~ks~~~~~ 536 (579)
T KOG1125|consen 509 MNLGAYKEAVKHLLEALSMQRKSRNHNK 536 (579)
T ss_pred hhhhhHHHHHHHHHHHHHhhhccccccc
Confidence 9999999999999999999998555443
|
|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=2e-13 Score=113.09 Aligned_cols=105 Identities=13% Similarity=0.051 Sum_probs=98.1
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHH-HhcCC--hHHHHHHHHHHhhhCCCchHHHHH
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCY-LMSDM--PQDALNDAMQAQIISPIWHIASYL 305 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~-~~~~~--~~~A~~~~~~al~~~p~~~~a~~~ 305 (340)
++...|...|..+...|++++|+.+|+++++++|+ +..++..+|.++ ...|+ +.+|++.++++++++|++..+++.
T Consensus 71 ~~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~-~~~~~~~lA~aL~~~~g~~~~~~A~~~l~~al~~dP~~~~al~~ 149 (198)
T PRK10370 71 QNSEQWALLGEYYLWRNDYDNALLAYRQALQLRGE-NAELYAALATVLYYQAGQHMTPQTREMIDKALALDANEVTALML 149 (198)
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHhCCCChhHHHH
Confidence 45668899999999999999999999999999999 899999999974 67777 599999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHhhhccccccc
Q 019495 306 QAAALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 306 ~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
+|.+++.+|+|++|+.+|+++++++|.+.
T Consensus 150 LA~~~~~~g~~~~Ai~~~~~aL~l~~~~~ 178 (198)
T PRK10370 150 LASDAFMQADYAQAIELWQKVLDLNSPRV 178 (198)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 99999999999999999999999999865
|
|
| >KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.2e-13 Score=112.63 Aligned_cols=111 Identities=19% Similarity=0.173 Sum_probs=100.2
Q ss_pred hhHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHH--------hcCCCc---------chHHhhhhHHHHHhcCChHHHHH
Q 019495 225 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFI--------DAGTMV---------SPTVYARRSLCYLMSDMPQDALN 287 (340)
Q Consensus 225 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al--------~~~p~~---------~~~~~~~~~~~~~~~~~~~~A~~ 287 (340)
.+.|.....+.++||.+|+.|+|.+|...|..|| +-.|.. .-.++.|.+.|++..|+|-++++
T Consensus 172 deKmkav~~l~q~GN~lfk~~~ykEA~~~YreAi~~l~~L~lkEkP~e~eW~eLdk~~tpLllNy~QC~L~~~e~yevle 251 (329)
T KOG0545|consen 172 DEKMKAVPVLHQEGNRLFKLGRYKEASSKYREAIICLRNLQLKEKPGEPEWLELDKMITPLLLNYCQCLLKKEEYYEVLE 251 (329)
T ss_pred hHhhhhhHHHHHhhhhhhhhccHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhhhHHHHhHHHHHhhHHHHHHHHH
Confidence 3778888999999999999999999999999997 223431 33678899999999999999999
Q ss_pred HHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccc
Q 019495 288 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 335 (340)
Q Consensus 288 ~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~ 335 (340)
.+...|+.+|.+.+|||++|.++....+.+||.++|.++|++||.-..
T Consensus 252 h~seiL~~~~~nvKA~frRakAhaa~Wn~~eA~~D~~~vL~ldpslas 299 (329)
T KOG0545|consen 252 HCSEILRHHPGNVKAYFRRAKAHAAVWNEAEAKADLQKVLELDPSLAS 299 (329)
T ss_pred HHHHHHhcCCchHHHHHHHHHHHHhhcCHHHHHHHHHHHHhcChhhHH
Confidence 999999999999999999999999999999999999999999998543
|
|
| >KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.3e-14 Score=122.23 Aligned_cols=105 Identities=22% Similarity=0.298 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCc---chHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHH
Q 019495 228 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV---SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 304 (340)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 304 (340)
.+..+.+...||.+|++|+|..|.++|++||.++|++ +.-+|.++|.++..+|+..+|+.+++.|+++||.+.++|.
T Consensus 246 ~k~le~~k~~gN~~fk~G~y~~A~E~Yteal~idP~n~~~naklY~nra~v~~rLgrl~eaisdc~~Al~iD~syikall 325 (486)
T KOG0550|consen 246 PKKLEVKKERGNDAFKNGNYRKAYECYTEALNIDPSNKKTNAKLYGNRALVNIRLGRLREAISDCNEALKIDSSYIKALL 325 (486)
T ss_pred HHHHHHHHhhhhhHhhccchhHHHHHHHHhhcCCccccchhHHHHHHhHhhhcccCCchhhhhhhhhhhhcCHHHHHHHH
Confidence 3566788999999999999999999999999999985 5678999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCChHHHHHHHHhhhccccc
Q 019495 305 LQAAALSAMGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 305 ~~g~~~~~~~~~~~A~~~~~~al~l~p~ 332 (340)
++|.||..+++|++|+++|++|++++..
T Consensus 326 ~ra~c~l~le~~e~AV~d~~~a~q~~~s 353 (486)
T KOG0550|consen 326 RRANCHLALEKWEEAVEDYEKAMQLEKD 353 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 9999999999999999999999988765
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.5e-14 Score=115.37 Aligned_cols=164 Identities=13% Similarity=0.129 Sum_probs=120.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC---CCCeEEeccCCCccCCCC-----------CccccCCcc
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDG-----------KSYSTNLAF 67 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~---~~~~kl~dfg~~~~~~~~-----------~~~~~~~~y 67 (340)
+.++++-++.|++.-++|+|.++ +|||||||+|+|..- ...+.++|||+++...+. ....||..|
T Consensus 109 tmkTvLMLaDQml~RiEyvH~r~-fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRY 187 (341)
T KOG1163|consen 109 TMKTVLMLADQMLSRIEYVHLRN-FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARY 187 (341)
T ss_pred hHHhHHHHHHHHHHHHHHHHhhc-cccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeee
Confidence 34677888999999999999999 999999999999863 345889999999865432 344678889
Q ss_pred cCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccccc---CCCCCchhHHHHHHHHHHhhcc
Q 019495 68 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL---EGQFTDDDGTELVRLASRCLQY 144 (340)
Q Consensus 68 ~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~ 144 (340)
.+--..-+...+...|+-|+|.++.++.-|..|+.+... ..+......+..... ....-...|.++.-.+.-|-..
T Consensus 188 ASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka-~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L 266 (341)
T KOG1163|consen 188 ASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKA-ATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGL 266 (341)
T ss_pred hhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccch-hhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhc
Confidence 987777666778899999999999999999877655321 122222222221111 1112233467888899999999
Q ss_pred CCCCCCCHHHHHHHhcccccCCC
Q 019495 145 EPRERPNPKSLVTALSPLQKETE 167 (340)
Q Consensus 145 ~p~~Rps~~~i~~~L~~~~~~~~ 167 (340)
--+.-|...-+.+.+.-+.....
T Consensus 267 ~F~E~Pdy~ylrqlFriLfr~ln 289 (341)
T KOG1163|consen 267 GFEEKPDYMYLRQLFRILFRTLN 289 (341)
T ss_pred CCCCCCcHHHHHHHHHHHHhhcc
Confidence 99999999988887777665543
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.4e-13 Score=117.41 Aligned_cols=160 Identities=14% Similarity=0.173 Sum_probs=119.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC-----CeEEeccCCCccCCCC-----------CccccCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-----NPRLSTFGLMKNSRDG-----------KSYSTNL 65 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~-----~~kl~dfg~~~~~~~~-----------~~~~~~~ 65 (340)
+.++++-++.|++.-++|+|++. .|.|||||+|+||...+ .+.++|||+++...+. ++..||-
T Consensus 122 SvKTV~miA~Qmi~rie~vH~k~-LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTA 200 (449)
T KOG1165|consen 122 SVKTVAMIAKQMITRIEYVHEKD-LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTA 200 (449)
T ss_pred cHHhHHHHHHHHHHHHHHHHhcc-eeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccce
Confidence 55788899999999999999999 99999999999997544 3789999999976543 3457899
Q ss_pred cccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccc---cCCCCCchhHHHHHHHHHHhh
Q 019495 66 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC---LEGQFTDDDGTELVRLASRCL 142 (340)
Q Consensus 66 ~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~cl 142 (340)
+||+--...+...+...|+-|+|=++.+.+-|..|+.+......+ .....+-+.. ....+-...+.++...+.-.-
T Consensus 201 RYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK-~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR 279 (449)
T KOG1165|consen 201 RYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNK-EKYEKIGETKRSTPIEVLCEGFPEEFATYLRYVR 279 (449)
T ss_pred eeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchH-HHHHHhccccccCCHHHHHhcCHHHHHHHHHHHH
Confidence 999998888888899999999999999999999887654222111 1111111110 001112234678888888888
Q ss_pred ccCCCCCCCHHHHHHHhcccc
Q 019495 143 QYEPRERPNPKSLVTALSPLQ 163 (340)
Q Consensus 143 ~~~p~~Rps~~~i~~~L~~~~ 163 (340)
..+-..-|.+.-+...+..+.
T Consensus 280 ~L~F~E~PDYdylr~Lf~dvl 300 (449)
T KOG1165|consen 280 RLDFFETPDYDYLRKLFDDVL 300 (449)
T ss_pred hcCcccCCCHHHHHHHHHHHH
Confidence 888999999887766554443
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.7e-13 Score=92.51 Aligned_cols=67 Identities=16% Similarity=0.133 Sum_probs=61.2
Q ss_pred chHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcC-ChHHHHHHHHhhhcccc
Q 019495 265 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMG-MENEAQVALKEGTTLEA 331 (340)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~-~~~~A~~~~~~al~l~p 331 (340)
++..|..+|.++...|+|++|+..|+++++++|+++.+|+++|.++..+| ++++|++++++++++||
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPNNAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 46778889999999999999999999999999999999999999999999 79999999999999988
|
... |
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.9e-14 Score=124.79 Aligned_cols=108 Identities=21% Similarity=0.281 Sum_probs=103.2
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 309 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 309 (340)
.+..+..+|+.++..++|+.|+..|.+||+++|+ ++.+|.+|+..|++.++|..|+.|+.+|++++|...++|+++|.+
T Consensus 3 ~a~e~k~ean~~l~~~~fd~avdlysKaI~ldpn-ca~~~anRa~a~lK~e~~~~Al~Da~kaie~dP~~~K~Y~rrg~a 81 (476)
T KOG0376|consen 3 SAEELKNEANEALKDKVFDVAVDLYSKAIELDPN-CAIYFANRALAHLKVESFGGALHDALKAIELDPTYIKAYVRRGTA 81 (476)
T ss_pred hhhhhhhHHhhhcccchHHHHHHHHHHHHhcCCc-ceeeechhhhhheeechhhhHHHHHHhhhhcCchhhheeeeccHH
Confidence 3567788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHhhhccccccccccC
Q 019495 310 LSAMGMENEAQVALKEGTTLEAKKNSTAG 338 (340)
Q Consensus 310 ~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 338 (340)
+..++++.+|...|+.+.++.|+++.+.+
T Consensus 82 ~m~l~~~~~A~~~l~~~~~l~Pnd~~~~r 110 (476)
T KOG0376|consen 82 VMALGEFKKALLDLEKVKKLAPNDPDATR 110 (476)
T ss_pred HHhHHHHHHHHHHHHHhhhcCcCcHHHHH
Confidence 99999999999999999999999987754
|
|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.5e-12 Score=126.84 Aligned_cols=105 Identities=23% Similarity=0.346 Sum_probs=97.2
Q ss_pred hHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHH
Q 019495 226 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 305 (340)
Q Consensus 226 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 305 (340)
++...+..++.+|+.++..|+|++|+..|+++|++.|+ +.+|.++|.||.++|++++|++++++|++++|++.++|++
T Consensus 122 ~~~~~a~~~k~~G~~~~~~~~~~~Ai~~y~~al~~~p~--~~~~~n~a~~~~~l~~~~~Ai~~~~~al~l~p~~~~a~~~ 199 (615)
T TIGR00990 122 ERKKYAAKLKEKGNKAYRNKDFNKAIKLYSKAIECKPD--PVYYSNRAACHNALGDWEKVVEDTTAALELDPDYSKALNR 199 (615)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--hHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 34556778999999999999999999999999999997 5688999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHhhhccccc
Q 019495 306 QAAALSAMGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 306 ~g~~~~~~~~~~~A~~~~~~al~l~p~ 332 (340)
+|.+|..+|+|++|+..|..++.+++.
T Consensus 200 ~a~a~~~lg~~~eA~~~~~~~~~~~~~ 226 (615)
T TIGR00990 200 RANAYDGLGKYADALLDLTASCIIDGF 226 (615)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 999999999999999999888777654
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.42 E-value=6.6e-13 Score=121.27 Aligned_cols=103 Identities=17% Similarity=0.148 Sum_probs=88.9
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHH
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 312 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 312 (340)
...+.|..+-++|++++|+.+|++||.+.|. .+..+.++|..|-.+|+..+|+..|.+|+.++|..++|+.++|.+|..
T Consensus 390 a~nNLa~i~kqqgnl~~Ai~~YkealrI~P~-fAda~~NmGnt~ke~g~v~~A~q~y~rAI~~nPt~AeAhsNLasi~kD 468 (966)
T KOG4626|consen 390 AHNNLASIYKQQGNLDDAIMCYKEALRIKPT-FADALSNMGNTYKEMGDVSAAIQCYTRAIQINPTFAEAHSNLASIYKD 468 (966)
T ss_pred hhhhHHHHHHhcccHHHHHHHHHHHHhcCch-HHHHHHhcchHHHHhhhHHHHHHHHHHHHhcCcHHHHHHhhHHHHhhc
Confidence 3455677777888888999999999998888 888888889888888898889999999999999999999999999999
Q ss_pred cCChHHHHHHHHhhhccccccccc
Q 019495 313 MGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 313 ~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
.|+..+|+..|+.||+++|+.+.|
T Consensus 469 sGni~~AI~sY~~aLklkPDfpdA 492 (966)
T KOG4626|consen 469 SGNIPEAIQSYRTALKLKPDFPDA 492 (966)
T ss_pred cCCcHHHHHHHHHHHccCCCCchh
Confidence 999999999999999999887765
|
|
| >KOG0551 consensus Hsp90 co-chaperone CNS1 (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.41 E-value=7.9e-13 Score=112.47 Aligned_cols=109 Identities=25% Similarity=0.289 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcC---CCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHH
Q 019495 228 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAG---TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 304 (340)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~---p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 304 (340)
-..+..++..||.+|+.++|..|+..|+++|+.. |+.+..+|.|||.|.+.+|+|..||+|+.+|++++|++.+||+
T Consensus 78 ~E~Aen~KeeGN~~fK~Kryk~A~~~Yt~Glk~kc~D~dlnavLY~NRAAa~~~l~NyRs~l~Dcs~al~~~P~h~Ka~~ 157 (390)
T KOG0551|consen 78 HEQAENYKEEGNEYFKEKRYKDAVESYTEGLKKKCADPDLNAVLYTNRAAAQLYLGNYRSALNDCSAALKLKPTHLKAYI 157 (390)
T ss_pred HHHHHHHHHHhHHHHHhhhHHHHHHHHHHHHhhcCCCccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhhh
Confidence 3478899999999999999999999999999865 4557899999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCChHHHHHHHHhhhccccccccc
Q 019495 305 LQAAALSAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 305 ~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
+-|.|++++.++++|..+.+.++.++-+.+.+
T Consensus 158 R~Akc~~eLe~~~~a~nw~ee~~~~d~e~K~~ 189 (390)
T KOG0551|consen 158 RGAKCLLELERFAEAVNWCEEGLQIDDEAKKA 189 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 99999999999999999999999888776543
|
|
| >KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.1e-12 Score=106.67 Aligned_cols=101 Identities=25% Similarity=0.307 Sum_probs=95.7
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
++.+..+|+.+|...+|..|+.+|.+||.++|. .+.+|.|++.||+++++++.+..++.+|++++|+.++++|.+|.++
T Consensus 10 a~qlkE~gnk~f~~k~y~~ai~~y~raI~~nP~-~~~Y~tnralchlk~~~~~~v~~dcrralql~~N~vk~h~flg~~~ 88 (284)
T KOG4642|consen 10 AEQLKEQGNKCFIPKRYDDAIDCYSRAICINPT-VASYYTNRALCHLKLKHWEPVEEDCRRALQLDPNLVKAHYFLGQWL 88 (284)
T ss_pred HHHHHhccccccchhhhchHHHHHHHHHhcCCC-cchhhhhHHHHHHHhhhhhhhhhhHHHHHhcChHHHHHHHHHHHHH
Confidence 457889999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHhhhccccc
Q 019495 311 SAMGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~ 332 (340)
.+...|++|+..+++|..+--+
T Consensus 89 l~s~~~~eaI~~Lqra~sl~r~ 110 (284)
T KOG4642|consen 89 LQSKGYDEAIKVLQRAYSLLRE 110 (284)
T ss_pred HhhccccHHHHHHHHHHHHHhc
Confidence 9999999999999999765433
|
|
| >PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.4e-12 Score=92.69 Aligned_cols=83 Identities=20% Similarity=0.294 Sum_probs=74.5
Q ss_pred hhcCHHHHHHHHHHHHhcCCCc-chHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHH
Q 019495 243 RQKDLKDAIECYTQFIDAGTMV-SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQV 321 (340)
Q Consensus 243 ~~~~~~~A~~~~~~al~~~p~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~ 321 (340)
++|+|++|+..|+++++.+|.+ +..++..+|.||+..|+|.+|+..+++ ++.+|.+...++.+|.++..+|+|++|++
T Consensus 1 ~~~~y~~Ai~~~~k~~~~~~~~~~~~~~~~la~~~~~~~~y~~A~~~~~~-~~~~~~~~~~~~l~a~~~~~l~~y~eAi~ 79 (84)
T PF12895_consen 1 DQGNYENAIKYYEKLLELDPTNPNSAYLYNLAQCYFQQGKYEEAIELLQK-LKLDPSNPDIHYLLARCLLKLGKYEEAIK 79 (84)
T ss_dssp HTT-HHHHHHHHHHHHHHHCGTHHHHHHHHHHHHHHHTTHHHHHHHHHHC-HTHHHCHHHHHHHHHHHHHHTT-HHHHHH
T ss_pred CCccHHHHHHHHHHHHHHCCCChhHHHHHHHHHHHHHCCCHHHHHHHHHH-hCCCCCCHHHHHHHHHHHHHhCCHHHHHH
Confidence 3689999999999999999963 456777799999999999999999999 99999999999999999999999999999
Q ss_pred HHHhh
Q 019495 322 ALKEG 326 (340)
Q Consensus 322 ~~~~a 326 (340)
.|+++
T Consensus 80 ~l~~~ 84 (84)
T PF12895_consen 80 ALEKA 84 (84)
T ss_dssp HHHHH
T ss_pred HHhcC
Confidence 99875
|
|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.38 E-value=6.3e-12 Score=102.19 Aligned_cols=97 Identities=14% Similarity=-0.019 Sum_probs=86.4
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
+....+.|-.++..|++..|.+.+++||+.+|+ +...|.-+|.+|.+.|+.+.|-+.|++|++++|++.+.+++.|..+
T Consensus 35 a~arlqLal~YL~~gd~~~A~~nlekAL~~DPs-~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~~GdVLNNYG~FL 113 (250)
T COG3063 35 AKARLQLALGYLQQGDYAQAKKNLEKALEHDPS-YYLAHLVRAHYYQKLGENDLADESYRKALSLAPNNGDVLNNYGAFL 113 (250)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCCccchhhhhhHHH
Confidence 446678888899999999999999999999999 8888888999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHhhhc
Q 019495 311 SAMGMENEAQVALKEGTT 328 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~ 328 (340)
+.+|+|++|...|++|+.
T Consensus 114 C~qg~~~eA~q~F~~Al~ 131 (250)
T COG3063 114 CAQGRPEEAMQQFERALA 131 (250)
T ss_pred HhCCChHHHHHHHHHHHh
Confidence 999999998888888874
|
|
| >TIGR02795 tol_pal_ybgF tol-pal system protein YbgF | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.3e-12 Score=95.35 Aligned_cols=105 Identities=14% Similarity=0.115 Sum_probs=95.6
Q ss_pred HHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCc--chHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCc---hHHHHHH
Q 019495 232 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---HIASYLQ 306 (340)
Q Consensus 232 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---~~a~~~~ 306 (340)
..++..|..++..|+|++|++.|++++..+|++ ....++.+|.++...|++++|+..+++++..+|++ +.+++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~~ 82 (119)
T TIGR02795 3 EAYYDAALLVLKAGDYADAIQAFQAFLKKYPKSTYAPNAHYWLGEAYYAQGKYADAAKAFLAVVKKYPKSPKAPDALLKL 82 (119)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCccccHHHHHHHHHHHHhhccHHHHHHHHHHHHHHCCCCCcccHHHHHH
Confidence 457889999999999999999999999999872 14678889999999999999999999999999885 6789999
Q ss_pred HHHHHHcCChHHHHHHHHhhhccccccccc
Q 019495 307 AAALSAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 307 g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
|.++..+|++++|+..|+++++..|++..+
T Consensus 83 ~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~ 112 (119)
T TIGR02795 83 GMSLQELGDKEKAKATLQQVIKRYPGSSAA 112 (119)
T ss_pred HHHHHHhCChHHHHHHHHHHHHHCcCChhH
Confidence 999999999999999999999999997754
|
Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction. |
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.2e-13 Score=122.48 Aligned_cols=106 Identities=14% Similarity=0.094 Sum_probs=100.1
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
...+.|...||.+--+++++.||++|++||.+||+ ..-+|...|.-+...++|+.|...|..||..+|.+..|||++|.
T Consensus 419 ~sPesWca~GNcfSLQkdh~~Aik~f~RAiQldp~-faYayTLlGhE~~~~ee~d~a~~~fr~Al~~~~rhYnAwYGlG~ 497 (638)
T KOG1126|consen 419 NSPESWCALGNCFSLQKDHDTAIKCFKRAIQLDPR-FAYAYTLLGHESIATEEFDKAMKSFRKALGVDPRHYNAWYGLGT 497 (638)
T ss_pred CCcHHHHHhcchhhhhhHHHHHHHHHHHhhccCCc-cchhhhhcCChhhhhHHHHhHHHHHHhhhcCCchhhHHHHhhhh
Confidence 34568999999999999999999999999999999 78888999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHhhhcccccccc
Q 019495 309 ALSAMGMENEAQVALKEGTTLEAKKNS 335 (340)
Q Consensus 309 ~~~~~~~~~~A~~~~~~al~l~p~~~~ 335 (340)
+|..+++++.|.-.|++|+++||.+.+
T Consensus 498 vy~Kqek~e~Ae~~fqkA~~INP~nsv 524 (638)
T KOG1126|consen 498 VYLKQEKLEFAEFHFQKAVEINPSNSV 524 (638)
T ss_pred heeccchhhHHHHHHHhhhcCCccchh
Confidence 999999999999999999999999864
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.5e-12 Score=117.62 Aligned_cols=108 Identities=13% Similarity=0.073 Sum_probs=95.4
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
..+....+.|+.+..+|.+++|+..|.++++..|. .+..+.++|.+|-..|++++|+..|++||+++|+.+++|.++|.
T Consensus 352 ~hadam~NLgni~~E~~~~e~A~~ly~~al~v~p~-~aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~fAda~~NmGn 430 (966)
T KOG4626|consen 352 NHADAMNNLGNIYREQGKIEEATRLYLKALEVFPE-FAAAHNNLASIYKQQGNLDDAIMCYKEALRIKPTFADALSNMGN 430 (966)
T ss_pred ccHHHHHHHHHHHHHhccchHHHHHHHHHHhhChh-hhhhhhhHHHHHHhcccHHHHHHHHHHHHhcCchHHHHHHhcch
Confidence 45567778888999999999999999999999998 88889999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 309 ALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 309 ~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
.|-.+|+.++|+.+|.+|+.++|...+|+
T Consensus 431 t~ke~g~v~~A~q~y~rAI~~nPt~AeAh 459 (966)
T KOG4626|consen 431 TYKEMGDVSAAIQCYTRAIQINPTFAEAH 459 (966)
T ss_pred HHHHhhhHHHHHHHHHHHHhcCcHHHHHH
Confidence 99999999999999999999999877665
|
|
| >cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.1e-11 Score=89.18 Aligned_cols=98 Identities=20% Similarity=0.253 Sum_probs=93.0
Q ss_pred HHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHc
Q 019495 234 SKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAM 313 (340)
Q Consensus 234 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~ 313 (340)
+...|..++..|++++|+..++++++..|. ....+..+|.++...+++++|++.++++++..|.+..+++.+|.++...
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (100)
T cd00189 3 LLNLGNLYYKLGDYDEALEYYEKALELDPD-NADAYYNLAAAYYKLGKYEEALEDYEKALELDPDNAKAYYNLGLAYYKL 81 (100)
T ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHH
Confidence 567888999999999999999999999999 7788899999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHhhhccccc
Q 019495 314 GMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 314 ~~~~~A~~~~~~al~l~p~ 332 (340)
|++++|...++++++++|+
T Consensus 82 ~~~~~a~~~~~~~~~~~~~ 100 (100)
T cd00189 82 GKYEEALEAYEKALELDPN 100 (100)
T ss_pred HhHHHHHHHHHHHHccCCC
Confidence 9999999999999998874
|
|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.35 E-value=6.5e-12 Score=122.46 Aligned_cols=105 Identities=15% Similarity=0.076 Sum_probs=68.6
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 309 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 309 (340)
.+..+...|..++..|++++|+..|+++++++|+ ....|..+|.++...|++++|+..++++++++|+++.+|+.+|.+
T Consensus 330 ~a~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~-~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~ 408 (615)
T TIGR00990 330 EAIALNLRGTFKCLKGKHLEALADLSKSIELDPR-VTQSYIKRASMNLELGDPDKAEEDFDKALKLNSEDPDIYYHRAQL 408 (615)
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3344555666666666666666666666666666 556666666666666666666666666666666666666666666
Q ss_pred HHHcCChHHHHHHHHhhhcccccccc
Q 019495 310 LSAMGMENEAQVALKEGTTLEAKKNS 335 (340)
Q Consensus 310 ~~~~~~~~~A~~~~~~al~l~p~~~~ 335 (340)
++.+|++++|+.+|+++++++|++..
T Consensus 409 ~~~~g~~~~A~~~~~kal~l~P~~~~ 434 (615)
T TIGR00990 409 HFIKGEFAQAGKDYQKSIDLDPDFIF 434 (615)
T ss_pred HHHcCCHHHHHHHHHHHHHcCccCHH
Confidence 66666666666666666666666543
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.32 E-value=4e-12 Score=86.68 Aligned_cols=67 Identities=22% Similarity=0.344 Sum_probs=64.0
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcC-ChHHHHHHHHHHhhhCC
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD-MPQDALNDAMQAQIISP 297 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~al~~~p 297 (340)
++..+...|..++..|+|++|+..|+++|+++|+ ++.+++++|.+|..+| ++.+|++++++|++++|
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPN-NAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 4667899999999999999999999999999999 8999999999999999 79999999999999998
|
... |
| >PRK02603 photosystem I assembly protein Ycf3; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.7e-11 Score=98.46 Aligned_cols=110 Identities=16% Similarity=0.116 Sum_probs=99.4
Q ss_pred hhHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCc--chHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHH
Q 019495 225 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIA 302 (340)
Q Consensus 225 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a 302 (340)
..+...+..++..|..+...|++++|+..|+++++..|+. ...++.++|.++...|++++|+..++++++++|++..+
T Consensus 29 ~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 108 (172)
T PRK02603 29 NKKAKEAFVYYRDGMSAQADGEYAEALENYEEALKLEEDPNDRSYILYNMGIIYASNGEHDKALEYYHQALELNPKQPSA 108 (172)
T ss_pred ccHhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHH
Confidence 3456677788999999999999999999999999887762 24688899999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCC--------------hHHHHHHHHhhhccccccc
Q 019495 303 SYLQAAALSAMGM--------------ENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 303 ~~~~g~~~~~~~~--------------~~~A~~~~~~al~l~p~~~ 334 (340)
++.+|.++..+|+ +++|+++++++++++|++.
T Consensus 109 ~~~lg~~~~~~g~~~~a~~~~~~A~~~~~~A~~~~~~a~~~~p~~~ 154 (172)
T PRK02603 109 LNNIAVIYHKRGEKAEEAGDQDEAEALFDKAAEYWKQAIRLAPNNY 154 (172)
T ss_pred HHHHHHHHHHcCChHhHhhCHHHHHHHHHHHHHHHHHHHhhCchhH
Confidence 9999999999998 7899999999999999863
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.5e-12 Score=105.64 Aligned_cols=97 Identities=18% Similarity=0.168 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHHHHhCCCccccCC-CCCCEEecCCCCeEEeccCCCccCCCCCc-----c------------ccCCccc
Q 019495 7 LRVVLHLAQALEYCTSKGRALYHDL-NAYRILFDEDGNPRLSTFGLMKNSRDGKS-----Y------------STNLAFT 68 (340)
Q Consensus 7 ~~i~~qi~~~l~ylH~~~~iiH~dl-k~~nill~~~~~~kl~dfg~~~~~~~~~~-----~------------~~~~~y~ 68 (340)
..++.|++.+|.++|+.| |+|||| ||.||+++.+|.++|+|||++........ . ..++.|+
T Consensus 94 ~~~~~qi~~~L~~lH~~G-IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l 172 (218)
T PRK12274 94 LAYFRAARRLLQQLHRCG-VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAAL 172 (218)
T ss_pred HHHHHHHHHHHHHHHHCc-CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 457889999999999999 999999 79999999999999999999985443321 0 1256677
Q ss_pred CcccccCC-CCC-CCcceehHHHHHHHHhhCCCCCCcc
Q 019495 69 PPEYLRTG-RVT-PESVIYSFGTLLLDLLSGKHIPPSH 104 (340)
Q Consensus 69 aPE~~~~~-~~~-~~~Di~s~G~il~el~~g~~~~~~~ 104 (340)
+|+-.... ..+ ...+.++.|.-+|.++|++.+..++
T Consensus 173 ~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 173 TPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred CHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 77643321 222 4578889999999999999876543
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.5e-12 Score=115.61 Aligned_cols=68 Identities=19% Similarity=0.176 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHhCCCccccCC-CCCCEEecCCCCeEEeccCCCccCCCC------------CccccCCcccCcccc
Q 019495 7 LRVVLHLAQALEYCTSKGRALYHDL-NAYRILFDEDGNPRLSTFGLMKNSRDG------------KSYSTNLAFTPPEYL 73 (340)
Q Consensus 7 ~~i~~qi~~~l~ylH~~~~iiH~dl-k~~nill~~~~~~kl~dfg~~~~~~~~------------~~~~~~~~y~aPE~~ 73 (340)
..++.|++.+|.|||+.| |+|||| ||+||+++.++.+||+|||+++..... ....+++.|++||.+
T Consensus 114 ~~~~~~i~~aL~~lH~~g-IiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~ 192 (365)
T PRK09188 114 PAWFRSAHRALRDLHRAG-ITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDAL 192 (365)
T ss_pred HHHHHHHHHHHHHHHHCC-CeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccC
Confidence 468899999999999999 999999 999999999999999999998855432 123457789999998
Q ss_pred cC
Q 019495 74 RT 75 (340)
Q Consensus 74 ~~ 75 (340)
.-
T Consensus 193 ~~ 194 (365)
T PRK09188 193 TP 194 (365)
T ss_pred Ch
Confidence 64
|
|
| >KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.2e-11 Score=105.93 Aligned_cols=105 Identities=17% Similarity=0.219 Sum_probs=100.4
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
.+++.-.+.|+.++..|++.+|+..|-.|++.+|+ +..+++++|.+|+.+|+-..|+.|++++|++.|++..|-..+|.
T Consensus 36 advekhlElGk~lla~~Q~sDALt~yHaAve~dp~-~Y~aifrRaT~yLAmGksk~al~Dl~rVlelKpDF~~ARiQRg~ 114 (504)
T KOG0624|consen 36 ADVEKHLELGKELLARGQLSDALTHYHAAVEGDPN-NYQAIFRRATVYLAMGKSKAALQDLSRVLELKPDFMAARIQRGV 114 (504)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCch-hHHHHHHHHHHHhhhcCCccchhhHHHHHhcCccHHHHHHHhch
Confidence 45667788999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHhhhccccccc
Q 019495 309 ALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 309 ~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
++..+|++++|...|+..|+.+|++.
T Consensus 115 vllK~Gele~A~~DF~~vl~~~~s~~ 140 (504)
T KOG0624|consen 115 VLLKQGELEQAEADFDQVLQHEPSNG 140 (504)
T ss_pred hhhhcccHHHHHHHHHHHHhcCCCcc
Confidence 99999999999999999999999754
|
|
| >PLN02789 farnesyltranstransferase | Back alignment and domain information |
|---|
Probab=99.29 E-value=7.7e-11 Score=104.45 Aligned_cols=146 Identities=7% Similarity=-0.059 Sum_probs=114.5
Q ss_pred cccchhhHHHHHHHHhccCCchhhhhhhhhh-hhhhHHHHHHHHHHHHhHHhhhc-CHHHHHHHHHHHHhcCCCcchHHh
Q 019495 192 CSRRDLTAIHEILEKISYKDDEGVANELSFQ-MWTDQMQETLNSKKKGDVAFRQK-DLKDAIECYTQFIDAGTMVSPTVY 269 (340)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~ 269 (340)
.-.+++..+...+..+-...+....+-..+. ...-...+...+..++..+...| ++++|+..++++++.+|. +..+|
T Consensus 31 ~y~~~~~~a~~~~ra~l~~~e~serAL~lt~~aI~lnP~~ytaW~~R~~iL~~L~~~l~eeL~~~~~~i~~npk-nyqaW 109 (320)
T PLN02789 31 AYTPEFREAMDYFRAVYASDERSPRALDLTADVIRLNPGNYTVWHFRRLCLEALDADLEEELDFAEDVAEDNPK-NYQIW 109 (320)
T ss_pred eeCHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHCCc-chHHh
Confidence 3445666666666654333322111111111 11222345557778888888888 689999999999999999 89999
Q ss_pred hhhHHHHHhcCCh--HHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhccccccccccC
Q 019495 270 ARRSLCYLMSDMP--QDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 338 (340)
Q Consensus 270 ~~~~~~~~~~~~~--~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 338 (340)
..++.++.++++. .+++..++++++++|++..+|+.+|.++..+|+|++|++++.++|++||.|.+||.
T Consensus 110 ~~R~~~l~~l~~~~~~~el~~~~kal~~dpkNy~AW~~R~w~l~~l~~~~eeL~~~~~~I~~d~~N~sAW~ 180 (320)
T PLN02789 110 HHRRWLAEKLGPDAANKELEFTRKILSLDAKNYHAWSHRQWVLRTLGGWEDELEYCHQLLEEDVRNNSAWN 180 (320)
T ss_pred HHHHHHHHHcCchhhHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCchhHHH
Confidence 9999999988874 78999999999999999999999999999999999999999999999999999884
|
|
| >CHL00033 ycf3 photosystem I assembly protein Ycf3 | Back alignment and domain information |
|---|
Probab=99.28 E-value=7.6e-11 Score=95.43 Aligned_cols=108 Identities=16% Similarity=0.086 Sum_probs=94.0
Q ss_pred hHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCc--chHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHH
Q 019495 226 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS 303 (340)
Q Consensus 226 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 303 (340)
+....+..+...|..+...|+|++|+..|++++.+.|+. ....+.++|.+|...|++++|+..+++|++++|....++
T Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~~~~~~~~~~ 109 (168)
T CHL00033 30 SGEKEAFTYYRDGMSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFQALERNPFLPQAL 109 (168)
T ss_pred chhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHH
Confidence 445567788999999999999999999999999887652 235789999999999999999999999999999999999
Q ss_pred HHHHHHHH-------HcCChH-------HHHHHHHhhhcccccc
Q 019495 304 YLQAAALS-------AMGMEN-------EAQVALKEGTTLEAKK 333 (340)
Q Consensus 304 ~~~g~~~~-------~~~~~~-------~A~~~~~~al~l~p~~ 333 (340)
+++|.++. .+|+++ +|+..|++++..+|.+
T Consensus 110 ~~la~i~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~a~~~~p~~ 153 (168)
T CHL00033 110 NNMAVICHYRGEQAIEQGDSEIAEAWFDQAAEYWKQAIALAPGN 153 (168)
T ss_pred HHHHHHHHHhhHHHHHcccHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 99999999 777766 6677777888888864
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.4e-11 Score=115.71 Aligned_cols=90 Identities=18% Similarity=0.098 Sum_probs=78.6
Q ss_pred cCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHH
Q 019495 245 KDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALK 324 (340)
Q Consensus 245 ~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~ 324 (340)
+++++|+..++++++++|+ ++.++..+|.++...|++++|+..|++|++++|+++.+|+.+|.++..+|++++|+..|+
T Consensus 318 ~~~~~A~~~~~~Al~ldP~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~G~~~eAi~~~~ 396 (553)
T PRK12370 318 NAMIKAKEHAIKATELDHN-NPQALGLLGLINTIHSEYIVGSLLFKQANLLSPISADIKYYYGWNLFMAGQLEEALQTIN 396 (553)
T ss_pred hHHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 4588899999999999998 788888888888888899999999999999999998888888999999999999999999
Q ss_pred hhhcccccccc
Q 019495 325 EGTTLEAKKNS 335 (340)
Q Consensus 325 ~al~l~p~~~~ 335 (340)
++++++|.+..
T Consensus 397 ~Al~l~P~~~~ 407 (553)
T PRK12370 397 ECLKLDPTRAA 407 (553)
T ss_pred HHHhcCCCChh
Confidence 99999888654
|
|
| >PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=4.1e-11 Score=120.48 Aligned_cols=104 Identities=7% Similarity=-0.140 Sum_probs=98.0
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
...+...|..+.+.|++++|+..|+++++++|+ ++.++.++|.++...|++++|++.+++|++++|+++.+++++|.++
T Consensus 609 ~~a~~~LA~~l~~lG~~deA~~~l~~AL~l~Pd-~~~a~~nLG~aL~~~G~~eeAi~~l~~AL~l~P~~~~a~~nLA~al 687 (987)
T PRK09782 609 ANAYVARATIYRQRHNVPAAVSDLRAALELEPN-NSNYQAALGYALWDSGDIAQSREMLERAHKGLPDDPALIRQLAYVN 687 (987)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 456778899999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHhhhcccccccc
Q 019495 311 SAMGMENEAQVALKEGTTLEAKKNS 335 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~~~~ 335 (340)
..+|++++|+.+|+++++++|++..
T Consensus 688 ~~lGd~~eA~~~l~~Al~l~P~~a~ 712 (987)
T PRK09782 688 QRLDDMAATQHYARLVIDDIDNQAL 712 (987)
T ss_pred HHCCCHHHHHHHHHHHHhcCCCCch
Confidence 9999999999999999999998753
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.3e-11 Score=106.23 Aligned_cols=105 Identities=15% Similarity=0.162 Sum_probs=99.1
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
++.+...|.-+|-.|++..|-+.++.+|+++|. ...+|..+|..|+..++-++-.++|.+|..+||+++..||.||+++
T Consensus 326 A~al~~~gtF~fL~g~~~~a~~d~~~~I~l~~~-~~~lyI~~a~~y~d~~~~~~~~~~F~~A~~ldp~n~dvYyHRgQm~ 404 (606)
T KOG0547|consen 326 AEALLLRGTFHFLKGDSLGAQEDFDAAIKLDPA-FNSLYIKRAAAYADENQSEKMWKDFNKAEDLDPENPDVYYHRGQMR 404 (606)
T ss_pred HHHHHHhhhhhhhcCCchhhhhhHHHHHhcCcc-cchHHHHHHHHHhhhhccHHHHHHHHHHHhcCCCCCchhHhHHHHH
Confidence 567788899999999999999999999999999 7787999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHhhhccccccccc
Q 019495 311 SAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
+.+++|++|++.|++|+.|+|++.-+
T Consensus 405 flL~q~e~A~aDF~Kai~L~pe~~~~ 430 (606)
T KOG0547|consen 405 FLLQQYEEAIADFQKAISLDPENAYA 430 (606)
T ss_pred HHHHHHHHHHHHHHHHhhcChhhhHH
Confidence 99999999999999999999998643
|
|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=4e-11 Score=99.38 Aligned_cols=94 Identities=16% Similarity=0.099 Sum_probs=88.1
Q ss_pred hhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH-HHcCC--hHHH
Q 019495 243 RQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL-SAMGM--ENEA 319 (340)
Q Consensus 243 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~-~~~~~--~~~A 319 (340)
..++.++++..++++++.+|+ +...|..+|.+|...|++++|+..|++|++++|+++..++.+|.++ ...|+ +++|
T Consensus 51 ~~~~~~~~i~~l~~~L~~~P~-~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~~~~~~~~lA~aL~~~~g~~~~~~A 129 (198)
T PRK10370 51 SQQTPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWRNDYDNALLAYRQALQLRGENAELYAALATVLYYQAGQHMTPQT 129 (198)
T ss_pred CchhHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCcHHH
Confidence 478889999999999999999 8999999999999999999999999999999999999999999985 67787 5999
Q ss_pred HHHHHhhhcccccccccc
Q 019495 320 QVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 320 ~~~~~~al~l~p~~~~~~ 337 (340)
.+.++++++++|++..++
T Consensus 130 ~~~l~~al~~dP~~~~al 147 (198)
T PRK10370 130 REMIDKALALDANEVTAL 147 (198)
T ss_pred HHHHHHHHHhCCCChhHH
Confidence 999999999999988764
|
|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.8e-11 Score=82.40 Aligned_cols=64 Identities=19% Similarity=0.076 Sum_probs=48.7
Q ss_pred hhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhccccccc
Q 019495 271 RRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 271 ~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
.+|..++..|++++|++.|+++++.+|+++.+++.+|.++..+|++++|+..|+++++++|+++
T Consensus 2 ~~a~~~~~~g~~~~A~~~~~~~l~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~p 65 (65)
T PF13432_consen 2 ALARALYQQGDYDEAIAAFEQALKQDPDNPEAWYLLGRILYQQGRYDEALAYYERALELDPDNP 65 (65)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-H
T ss_pred hHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCC
Confidence 3577777778888888888888888888888888888888888888888888888888877753
|
|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.4e-11 Score=95.46 Aligned_cols=83 Identities=11% Similarity=-0.028 Sum_probs=77.2
Q ss_pred HHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhccc
Q 019495 251 IECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 330 (340)
Q Consensus 251 ~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 330 (340)
...|+++++++|+ . +..+|.++...|++++|+..|++++.++|.+..+|+.+|.++..+|++++|+..|+++++++
T Consensus 13 ~~~~~~al~~~p~-~---~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~ 88 (144)
T PRK15359 13 EDILKQLLSVDPE-T---VYASGYASWQEGDYSRAVIDFSWLVMAQPWSWRAHIALAGTWMMLKEYTTAINFYGHALMLD 88 (144)
T ss_pred HHHHHHHHHcCHH-H---HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 4678899999998 4 44679999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccc
Q 019495 331 AKKNSTA 337 (340)
Q Consensus 331 p~~~~~~ 337 (340)
|++..++
T Consensus 89 p~~~~a~ 95 (144)
T PRK15359 89 ASHPEPV 95 (144)
T ss_pred CCCcHHH
Confidence 9998765
|
|
| >PRK15331 chaperone protein SicA; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.1e-11 Score=93.42 Aligned_cols=104 Identities=9% Similarity=-0.050 Sum_probs=97.2
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
..++.....|..++..|++++|...|+-....+|. ++.++..+|.|+..+++|++|+..|..|..++++++...|..|.
T Consensus 35 ~~le~iY~~Ay~~y~~Gk~~eA~~~F~~L~~~d~~-n~~Y~~GLaa~~Q~~k~y~~Ai~~Y~~A~~l~~~dp~p~f~agq 113 (165)
T PRK15331 35 DMMDGLYAHAYEFYNQGRLDEAETFFRFLCIYDFY-NPDYTMGLAAVCQLKKQFQKACDLYAVAFTLLKNDYRPVFFTGQ 113 (165)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCccchHHH
Confidence 44567888999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHhhhccccccc
Q 019495 309 ALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 309 ~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
|+..+|+.+.|+.+|..+++ .|++.
T Consensus 114 C~l~l~~~~~A~~~f~~a~~-~~~~~ 138 (165)
T PRK15331 114 CQLLMRKAAKARQCFELVNE-RTEDE 138 (165)
T ss_pred HHHHhCCHHHHHHHHHHHHh-CcchH
Confidence 99999999999999999998 45543
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=8.9e-11 Score=113.81 Aligned_cols=111 Identities=5% Similarity=-0.091 Sum_probs=101.3
Q ss_pred hHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHH
Q 019495 226 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 305 (340)
Q Consensus 226 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 305 (340)
.+++.....+..|......|++++|...++.++++.|+ +..++.+++.++.+.+++++|+..+++++..+|+++.+++.
T Consensus 81 ~~~~~~~~~~~La~i~~~~g~~~ea~~~l~~~~~~~Pd-~~~a~~~~a~~L~~~~~~eeA~~~~~~~l~~~p~~~~~~~~ 159 (694)
T PRK15179 81 RYPHTELFQVLVARALEAAHRSDEGLAVWRGIHQRFPD-SSEAFILMLRGVKRQQGIEAGRAEIELYFSGGSSSAREILL 159 (694)
T ss_pred hccccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHhhcCCCCHHHHHH
Confidence 45677888899999999999999999999999999999 88999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 306 QAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 306 ~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
+|.++.++|+|++|++.|+++++-+|++.+++
T Consensus 160 ~a~~l~~~g~~~~A~~~y~~~~~~~p~~~~~~ 191 (694)
T PRK15179 160 EAKSWDEIGQSEQADACFERLSRQHPEFENGY 191 (694)
T ss_pred HHHHHHHhcchHHHHHHHHHHHhcCCCcHHHH
Confidence 99999999999999999999999888877654
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=8.1e-11 Score=113.08 Aligned_cols=105 Identities=10% Similarity=-0.064 Sum_probs=93.4
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 309 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 309 (340)
+...+...|..+...|++++|+..|+++++++|+ ++.+++.+|.++...|++++|+..++++++++|.++.+++.++.+
T Consensus 337 ~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~l~~~G~~~eAi~~~~~Al~l~P~~~~~~~~~~~~ 415 (553)
T PRK12370 337 NPQALGLLGLINTIHSEYIVGSLLFKQANLLSPI-SADIKYYYGWNLFMAGQLEEALQTINECLKLDPTRAAAGITKLWI 415 (553)
T ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCChhhHHHHHHH
Confidence 3445567788889999999999999999999999 889999999999999999999999999999999999888888888
Q ss_pred HHHcCChHHHHHHHHhhhccc-ccccc
Q 019495 310 LSAMGMENEAQVALKEGTTLE-AKKNS 335 (340)
Q Consensus 310 ~~~~~~~~~A~~~~~~al~l~-p~~~~ 335 (340)
++.+|++++|++.++++++.+ |.++.
T Consensus 416 ~~~~g~~eeA~~~~~~~l~~~~p~~~~ 442 (553)
T PRK12370 416 TYYHTGIDDAIRLGDELRSQHLQDNPI 442 (553)
T ss_pred HHhccCHHHHHHHHHHHHHhccccCHH
Confidence 888999999999999999875 55543
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=7.2e-12 Score=104.96 Aligned_cols=78 Identities=14% Similarity=0.130 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCccccCCcccCcccccCCCCCCCcceehH
Q 019495 8 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSF 87 (340)
Q Consensus 8 ~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~ 87 (340)
....+|+.+|..+|..| ++|||++|+||+++.+| ++++|||..+......... .+.....+..++|+|||
T Consensus 139 ~~~~~i~~~l~~lH~~g-i~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~d--------~~vler~y~~~~di~~l 208 (232)
T PRK10359 139 DVKAKIKASIESLHQHG-MVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAKD--------RIDLERHYGIKNEIKDL 208 (232)
T ss_pred HHHHHHHHHHHHHHHcC-CccCCCChHHEEEeCCC-EEEEECCCcccccchhhHH--------HHHHHhHhcccccccce
Confidence 35679999999999999 99999999999999988 9999999876543222110 02222346678999999
Q ss_pred HHHHHHHh
Q 019495 88 GTLLLDLL 95 (340)
Q Consensus 88 G~il~el~ 95 (340)
|+++..+.
T Consensus 209 g~~~~~~~ 216 (232)
T PRK10359 209 GYYLLIYK 216 (232)
T ss_pred eEeehHHH
Confidence 99987654
|
|
| >TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.2e-10 Score=99.73 Aligned_cols=107 Identities=17% Similarity=0.103 Sum_probs=97.0
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcch---HHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchH---H
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP---TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI---A 302 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~---a 302 (340)
..+..++..|..++..|+|++|+..|+++++.+|+ ++ ..++.+|.+|...|++++|+..++++++.+|+++. +
T Consensus 31 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~a~~~la~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a 109 (235)
T TIGR03302 31 WPAEELYEEAKEALDSGDYTEAIKYFEALESRYPF-SPYAEQAQLDLAYAYYKSGDYAEAIAAADRFIRLHPNHPDADYA 109 (235)
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCchHHH
Confidence 34557789999999999999999999999999998 44 57788999999999999999999999999998876 7
Q ss_pred HHHHHHHHHHc--------CChHHHHHHHHhhhccccccccc
Q 019495 303 SYLQAAALSAM--------GMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 303 ~~~~g~~~~~~--------~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
++.+|.++..+ |++++|++.|+++++.+|++..+
T Consensus 110 ~~~~g~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~ 151 (235)
T TIGR03302 110 YYLRGLSNYNQIDRVDRDQTAAREAFEAFQELIRRYPNSEYA 151 (235)
T ss_pred HHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHCCCChhH
Confidence 99999999987 89999999999999999998654
|
Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). |
| >KOG4555 consensus TPR repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.18 E-value=5.2e-10 Score=82.81 Aligned_cols=106 Identities=16% Similarity=0.178 Sum_probs=95.4
Q ss_pred hHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCc----hH
Q 019495 226 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW----HI 301 (340)
Q Consensus 226 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~----~~ 301 (340)
+.++....+..+|-.+-..|+.+.|++.|.++|.+-|. .+.+|+|++..+...|+.++|+.++++|+++.... -.
T Consensus 38 ~~~e~S~~LEl~~valaE~g~Ld~AlE~F~qal~l~P~-raSayNNRAQa~RLq~~~e~ALdDLn~AleLag~~trtacq 116 (175)
T KOG4555|consen 38 QAIKASRELELKAIALAEAGDLDGALELFGQALCLAPE-RASAYNNRAQALRLQGDDEEALDDLNKALELAGDQTRTACQ 116 (175)
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhccc-chHhhccHHHHHHHcCChHHHHHHHHHHHHhcCccchHHHH
Confidence 44556667788888999999999999999999999999 99999999999999999999999999999996543 46
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHhhhccccc
Q 019495 302 ASYLQAAALSAMGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 302 a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 332 (340)
+|..+|.+|..+|+-+.|...|..|-++..+
T Consensus 117 a~vQRg~lyRl~g~dd~AR~DFe~AA~LGS~ 147 (175)
T KOG4555|consen 117 AFVQRGLLYRLLGNDDAARADFEAAAQLGSK 147 (175)
T ss_pred HHHHHHHHHHHhCchHHHHHhHHHHHHhCCH
Confidence 7999999999999999999999999887654
|
|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.6e-10 Score=77.75 Aligned_cols=64 Identities=16% Similarity=0.146 Sum_probs=59.9
Q ss_pred HHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCch
Q 019495 236 KKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 300 (340)
Q Consensus 236 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 300 (340)
.+|..++..|+|++|++.|+++++.+|+ +..++..+|.++...|++++|+..|+++++++|+++
T Consensus 2 ~~a~~~~~~g~~~~A~~~~~~~l~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~p 65 (65)
T PF13432_consen 2 ALARALYQQGDYDEAIAAFEQALKQDPD-NPEAWYLLGRILYQQGRYDEALAYYERALELDPDNP 65 (65)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHCCSTT-HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-H
T ss_pred hHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCC
Confidence 5789999999999999999999999999 999999999999999999999999999999999975
|
|
| >PRK10803 tol-pal system protein YbgF; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.6e-10 Score=97.27 Aligned_cols=104 Identities=11% Similarity=0.010 Sum_probs=92.3
Q ss_pred HHHHHHhHH-hhhcCHHHHHHHHHHHHhcCCCcc--hHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCC---chHHHHHH
Q 019495 233 NSKKKGDVA-FRQKDLKDAIECYTQFIDAGTMVS--PTVYARRSLCYLMSDMPQDALNDAMQAQIISPI---WHIASYLQ 306 (340)
Q Consensus 233 ~~~~~a~~~-~~~~~~~~A~~~~~~al~~~p~~~--~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~---~~~a~~~~ 306 (340)
..+..|..+ ++.|+|++|+..|+..++..|+.. +.+++.+|.+|+..|++++|+..|+++++.+|+ .+++++.+
T Consensus 144 ~~Y~~A~~l~~~~~~y~~Ai~af~~fl~~yP~s~~a~~A~y~LG~~y~~~g~~~~A~~~f~~vv~~yP~s~~~~dAl~kl 223 (263)
T PRK10803 144 TDYNAAIALVQDKSRQDDAIVAFQNFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKV 223 (263)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCcchhHHHHHH
Confidence 345556665 667999999999999999999931 578899999999999999999999999999887 57889999
Q ss_pred HHHHHHcCChHHHHHHHHhhhccccccccc
Q 019495 307 AAALSAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 307 g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
|.++..+|++++|+..|+++++..|+...+
T Consensus 224 g~~~~~~g~~~~A~~~~~~vi~~yP~s~~a 253 (263)
T PRK10803 224 GVIMQDKGDTAKAKAVYQQVIKKYPGTDGA 253 (263)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCcCCHHH
Confidence 999999999999999999999999987654
|
|
| >TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW | Back alignment and domain information |
|---|
Probab=99.15 E-value=5.8e-10 Score=94.28 Aligned_cols=106 Identities=10% Similarity=0.005 Sum_probs=91.6
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhC--CCchHHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS--PIWHIASYLQA 307 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~--p~~~~a~~~~g 307 (340)
....+...|..++..|++++|++.|+++++.+|. +...+.+++.++...|++++|++.++++++.. +.....++.+|
T Consensus 64 ~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~l~ 142 (234)
T TIGR02521 64 DYLAYLALALYYQQLGELEKAEDSFRRALTLNPN-NGDVLNNYGTFLCQQGKYEQAMQQFEQAIEDPLYPQPARSLENAG 142 (234)
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccccchHHHHHHH
Confidence 3456677888999999999999999999999998 77888889999999999999999999998753 55677888899
Q ss_pred HHHHHcCChHHHHHHHHhhhccccccccc
Q 019495 308 AALSAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 308 ~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
.++...|++++|...|+++++.+|.+..+
T Consensus 143 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~ 171 (234)
T TIGR02521 143 LCALKAGDFDKAEKYLTRALQIDPQRPES 171 (234)
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCcCChHH
Confidence 99999999999999999999999886544
|
Members of this family are designated PilF in ref (PubMed:8973346) and PilW in ref (PubMed:15612916). This outer membrane protein is required both for pilus stability and for pilus function such as adherence to human cells. Members of this family contain copies of the TPR (tetratricopeptide repeat) domain. |
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.14 E-value=5.8e-11 Score=97.92 Aligned_cols=53 Identities=15% Similarity=0.225 Sum_probs=46.8
Q ss_pred CCHHHHHHHHHHHHHHHHHH-HhCCCccccCCCCCCEEecCCCCeEEeccCCCccC
Q 019495 1 MKWAMRLRVVLHLAQALEYC-TSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 55 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~yl-H~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~ 55 (340)
+++.....++.|++.+|.|+ |+.+ |+||||||+||+++ ++.++++|||++...
T Consensus 114 ~~~~~~~~i~~qi~~~L~~l~H~~g-iiHrDlkP~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 114 LSESKARELYLQVIQIMRILYQDCR-LVHADLSEYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEE-CCcEEEEEccccccC
Confidence 35667889999999999999 6888 99999999999998 478999999998753
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.9e-10 Score=101.80 Aligned_cols=93 Identities=17% Similarity=0.047 Sum_probs=84.6
Q ss_pred cCHHHHHHHHHHHHh---cCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHH
Q 019495 245 KDLKDAIECYTQFID---AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQV 321 (340)
Q Consensus 245 ~~~~~A~~~~~~al~---~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~ 321 (340)
+..+.++..++++|. ++|...+.+|+.+|.+|...|++.+|+.+|+++++++|+++.+|+.+|.++..+|++++|++
T Consensus 40 ~~~e~~i~~~~~~l~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~A~~ 119 (296)
T PRK11189 40 LQQEVILARLNQILASRDLTDEERAQLHYERGVLYDSLGLRALARNDFSQALALRPDMADAYNYLGIYLTQAGNFDAAYE 119 (296)
T ss_pred hHHHHHHHHHHHHHccccCCcHhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCCCHHHHHH
Confidence 456889999999996 55553578899999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcccccccccc
Q 019495 322 ALKEGTTLEAKKNSTA 337 (340)
Q Consensus 322 ~~~~al~l~p~~~~~~ 337 (340)
.|+++++++|++..++
T Consensus 120 ~~~~Al~l~P~~~~a~ 135 (296)
T PRK11189 120 AFDSVLELDPTYNYAY 135 (296)
T ss_pred HHHHHHHhCCCCHHHH
Confidence 9999999999987664
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.14 E-value=7.7e-11 Score=97.39 Aligned_cols=54 Identities=17% Similarity=0.257 Sum_probs=48.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHh-CCCccccCCCCCCEEecCCCCeEEeccCCCccCCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 57 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~-~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~ 57 (340)
+......++.|++.++.++|+ .| |+||||||.||+++ ++.++++|||+++....
T Consensus 115 ~~~~~~~i~~~l~~~l~~lH~~~g-ivHrDlkP~NIll~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 115 EEEEAEELYEQVVEQMRRLYQEAG-LVHGDLSEYNILYH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCC-EecCCCChhhEEEE-CCCEEEEEcccceecCC
Confidence 445778999999999999999 89 99999999999999 78999999999876543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.1e-10 Score=100.14 Aligned_cols=112 Identities=13% Similarity=0.144 Sum_probs=101.6
Q ss_pred hHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchH----HhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchH
Q 019495 226 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT----VYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI 301 (340)
Q Consensus 226 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~----~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 301 (340)
+.++........+......++|.++++.+++.++.+|. ..+ .+...+.|+...|++.+||..|.++|.++|++++
T Consensus 264 KklkKv~K~les~e~~ie~~~~t~cle~ge~vlk~ep~-~~~ir~~~~r~~c~C~~~d~~~~eAiqqC~evL~~d~~dv~ 342 (504)
T KOG0624|consen 264 KKLKKVVKSLESAEQAIEEKHWTECLEAGEKVLKNEPE-ETMIRYNGFRVLCTCYREDEQFGEAIQQCKEVLDIDPDDVQ 342 (504)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCCc-ccceeeeeeheeeecccccCCHHHHHHHHHHHHhcCchHHH
Confidence 56677777788889999999999999999999999998 443 3445789999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHhhhccccccccccC
Q 019495 302 ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 338 (340)
Q Consensus 302 a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 338 (340)
++..+|.+|..-.+|+.|+..|++|+++|+++..++.
T Consensus 343 ~l~dRAeA~l~dE~YD~AI~dye~A~e~n~sn~~~re 379 (504)
T KOG0624|consen 343 VLCDRAEAYLGDEMYDDAIHDYEKALELNESNTRARE 379 (504)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHhcCcccHHHHH
Confidence 9999999999999999999999999999999987654
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.3e-11 Score=118.19 Aligned_cols=147 Identities=20% Similarity=0.261 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHHHHH-hCCCccccCCCCCCEEecCCC-CeEEeccCCCccCCC--CC-----cccc-CCcccCcccccC
Q 019495 6 RLRVVLHLAQALEYCT-SKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRD--GK-----SYST-NLAFTPPEYLRT 75 (340)
Q Consensus 6 ~~~i~~qi~~~l~ylH-~~~~iiH~dlk~~nill~~~~-~~kl~dfg~~~~~~~--~~-----~~~~-~~~y~aPE~~~~ 75 (340)
.-.++.|+..++.|+| ..+ +.|||+||+|.+++..+ ..++.|||++..... +. ...| ++.|++||...+
T Consensus 125 ~~~~~~ql~s~l~~~H~~~~-~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~ 203 (601)
T KOG0590|consen 125 ASRYLPQLNSGLSYLHPENG-VTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSG 203 (601)
T ss_pred hhhhhhhhccCccccCcccc-cccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccc
Confidence 3467889999999999 888 99999999999999999 999999999876655 21 2357 899999999987
Q ss_pred C-CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccc--cCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 76 G-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC--LEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 76 ~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
. ......|+||.|+++.-+++|..|+....... .......... ..............+++.+++..+|..|.+.
T Consensus 204 ~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~ 280 (601)
T KOG0590|consen 204 KAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD---GRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSI 280 (601)
T ss_pred hhhcCCCcccccccccccccccCCCCcccccccc---ccceeecccccccccCccccCChhhhhcccccccCCchhcccc
Confidence 3 45778999999999999999987754322111 1111111111 1112234455778899999999999999999
Q ss_pred HHHH
Q 019495 153 KSLV 156 (340)
Q Consensus 153 ~~i~ 156 (340)
+++.
T Consensus 281 ~~~~ 284 (601)
T KOG0590|consen 281 EELK 284 (601)
T ss_pred cccc
Confidence 8875
|
|
| >KOG1308 consensus Hsp70-interacting protein Hip/Transient component of progesterone receptor complexes and an Hsp70-binding protein [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.7e-11 Score=103.00 Aligned_cols=106 Identities=23% Similarity=0.259 Sum_probs=101.7
Q ss_pred hHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHH
Q 019495 226 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 305 (340)
Q Consensus 226 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 305 (340)
+.+..+.+...+|.+++..|++++|++.|+.+|+++|. .+.+|.+++.+++++++...|+.+|..|++++|+..+.|--
T Consensus 109 e~~eqa~e~k~~A~eAln~G~~~~ai~~~t~ai~lnp~-~a~l~~kr~sv~lkl~kp~~airD~d~A~ein~Dsa~~ykf 187 (377)
T KOG1308|consen 109 EMMDQANDKKVQASEALNDGEFDTAIELFTSAIELNPP-LAILYAKRASVFLKLKKPNAAIRDCDFAIEINPDSAKGYKF 187 (377)
T ss_pred HHHHHHHHHHHHHHHHhcCcchhhhhcccccccccCCc-hhhhcccccceeeeccCCchhhhhhhhhhccCcccccccch
Confidence 56677789999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHhhhccccc
Q 019495 306 QAAALSAMGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 306 ~g~~~~~~~~~~~A~~~~~~al~l~p~ 332 (340)
+|.++..+|++++|-.+|..|.++|-.
T Consensus 188 rg~A~rllg~~e~aa~dl~~a~kld~d 214 (377)
T KOG1308|consen 188 RGYAERLLGNWEEAAHDLALACKLDYD 214 (377)
T ss_pred hhHHHHHhhchHHHHHHHHHHHhcccc
Confidence 999999999999999999999999865
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.12 E-value=8.7e-11 Score=115.54 Aligned_cols=149 Identities=16% Similarity=0.153 Sum_probs=106.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEec-------CCCCeEEeccCCCccC---CCCCcc---ccCCcc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-------EDGNPRLSTFGLMKNS---RDGKSY---STNLAF 67 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~-------~~~~~kl~dfg~~~~~---~~~~~~---~~~~~y 67 (340)
++|.-.+.++.|++..++.||..+ |||+||||+|++|. ....++|+|||.+..+ .+++.+ .+|-.+
T Consensus 791 m~e~lv~~~~~qml~ive~lH~~~-IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f 869 (974)
T KOG1166|consen 791 MDEYLVMFFSCQMLRIVEHLHAMG-IIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLF 869 (974)
T ss_pred CCchhhhHHHHHHHHHHHHHHhcc-eecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccc
Confidence 577888999999999999999999 99999999999993 2234899999987643 344333 457789
Q ss_pred cCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHH-HHHHHHHHhhccCC
Q 019495 68 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT-ELVRLASRCLQYEP 146 (340)
Q Consensus 68 ~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~li~~cl~~~p 146 (340)
-.+|+..|.+.+...|.|.++.+++-|+.|+..- ...+....+... ++..... -.-++...+|+.|-
T Consensus 870 ~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q-------~~~g~~~~~~~~-----~~Ry~~~~~W~~~F~~lLN~~~ 937 (974)
T KOG1166|consen 870 DCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME-------VKNGSSWMVKTN-----FPRYWKRDMWNKFFDLLLNPDC 937 (974)
T ss_pred hhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH-------hcCCcceecccc-----chhhhhHHHHHHHHHHHhCcCc
Confidence 9999999999999999999999999999997321 111222221111 1111112 23456667777444
Q ss_pred CCCCCHHHHHHHhccc
Q 019495 147 RERPNPKSLVTALSPL 162 (340)
Q Consensus 147 ~~Rps~~~i~~~L~~~ 162 (340)
..=|...+++..|+..
T Consensus 938 ~~~p~l~~lr~~~~~~ 953 (974)
T KOG1166|consen 938 DTLPNLQELRTELEEV 953 (974)
T ss_pred ccchhHHHHHHHHHHH
Confidence 4447778887777665
|
|
| >KOG1155 consensus Anaphase-promoting complex (APC), Cdc23 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.8e-10 Score=101.14 Aligned_cols=100 Identities=13% Similarity=0.048 Sum_probs=90.4
Q ss_pred HhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChH
Q 019495 238 GDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMEN 317 (340)
Q Consensus 238 a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~ 317 (340)
||=+--.++.+.|+.+|++|+++||. ...+|...|+-|..+++-..|++.|.+|++++|.|..|||++|++|..+++..
T Consensus 337 aNYYSlr~eHEKAv~YFkRALkLNp~-~~~aWTLmGHEyvEmKNt~AAi~sYRrAvdi~p~DyRAWYGLGQaYeim~Mh~ 415 (559)
T KOG1155|consen 337 ANYYSLRSEHEKAVMYFKRALKLNPK-YLSAWTLMGHEYVEMKNTHAAIESYRRAVDINPRDYRAWYGLGQAYEIMKMHF 415 (559)
T ss_pred hhHHHHHHhHHHHHHHHHHHHhcCcc-hhHHHHHhhHHHHHhcccHHHHHHHHHHHhcCchhHHHHhhhhHHHHHhcchH
Confidence 66666788899999999999999999 88899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccccccccccC
Q 019495 318 EAQVALKEGTTLEAKKNSTAG 338 (340)
Q Consensus 318 ~A~~~~~~al~l~p~~~~~~~ 338 (340)
-|+=+|++|+++.|.|+.-|.
T Consensus 416 YaLyYfqkA~~~kPnDsRlw~ 436 (559)
T KOG1155|consen 416 YALYYFQKALELKPNDSRLWV 436 (559)
T ss_pred HHHHHHHHHHhcCCCchHHHH
Confidence 999999999999999887653
|
|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.4e-10 Score=107.14 Aligned_cols=102 Identities=11% Similarity=0.090 Sum_probs=80.4
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHH
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 312 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 312 (340)
.+..+|-++....+|+.|..+|+.||..+|+ ..-+|+-+|.+|.++++++.|.-.|++|+++||.+.......|.++.+
T Consensus 457 ayTLlGhE~~~~ee~d~a~~~fr~Al~~~~r-hYnAwYGlG~vy~Kqek~e~Ae~~fqkA~~INP~nsvi~~~~g~~~~~ 535 (638)
T KOG1126|consen 457 AYTLLGHESIATEEFDKAMKSFRKALGVDPR-HYNAWYGLGTVYLKQEKLEFAEFHFQKAVEINPSNSVILCHIGRIQHQ 535 (638)
T ss_pred hhhhcCChhhhhHHHHhHHHHHHhhhcCCch-hhHHHHhhhhheeccchhhHHHHHHHhhhcCCccchhHHhhhhHHHHH
Confidence 4455667777777888888888888888888 677777778888888888888888888888888888777778888888
Q ss_pred cCChHHHHHHHHhhhcccccccc
Q 019495 313 MGMENEAQVALKEGTTLEAKKNS 335 (340)
Q Consensus 313 ~~~~~~A~~~~~~al~l~p~~~~ 335 (340)
+|+.++|+..|++|+.+||+++-
T Consensus 536 ~k~~d~AL~~~~~A~~ld~kn~l 558 (638)
T KOG1126|consen 536 LKRKDKALQLYEKAIHLDPKNPL 558 (638)
T ss_pred hhhhhHHHHHHHHHHhcCCCCch
Confidence 88888888888888888887763
|
|
| >PLN02789 farnesyltranstransferase | Back alignment and domain information |
|---|
Probab=99.10 E-value=5.8e-10 Score=98.93 Aligned_cols=107 Identities=16% Similarity=0.077 Sum_probs=94.6
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcC-ChHHHHHHHHHHhhhCCCchHHHHHHH
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD-MPQDALNDAMQAQIISPIWHIASYLQA 307 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~al~~~p~~~~a~~~~g 307 (340)
.++..++... +...+++++|+..++++|+++|+ +.++|..++.++..++ ++++|+..++++++.+|++..+|+.+|
T Consensus 37 ~~a~~~~ra~--l~~~e~serAL~lt~~aI~lnP~-~ytaW~~R~~iL~~L~~~l~eeL~~~~~~i~~npknyqaW~~R~ 113 (320)
T PLN02789 37 REAMDYFRAV--YASDERSPRALDLTADVIRLNPG-NYTVWHFRRLCLEALDADLEEELDFAEDVAEDNPKNYQIWHHRR 113 (320)
T ss_pred HHHHHHHHHH--HHcCCCCHHHHHHHHHHHHHCch-hHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHCCcchHHhHHHH
Confidence 3444444432 45678999999999999999999 8999999999999998 689999999999999999999999999
Q ss_pred HHHHHcCCh--HHHHHHHHhhhccccccccccC
Q 019495 308 AALSAMGME--NEAQVALKEGTTLEAKKNSTAG 338 (340)
Q Consensus 308 ~~~~~~~~~--~~A~~~~~~al~l~p~~~~~~~ 338 (340)
.++..+|+. +++++.+++++++||+|..||.
T Consensus 114 ~~l~~l~~~~~~~el~~~~kal~~dpkNy~AW~ 146 (320)
T PLN02789 114 WLAEKLGPDAANKELEFTRKILSLDAKNYHAWS 146 (320)
T ss_pred HHHHHcCchhhHHHHHHHHHHHHhCcccHHHHH
Confidence 999999984 7899999999999999998875
|
|
| >PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=5.9e-10 Score=112.26 Aligned_cols=96 Identities=14% Similarity=0.050 Sum_probs=87.4
Q ss_pred HHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHH
Q 019495 240 VAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEA 319 (340)
Q Consensus 240 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A 319 (340)
.....|++++|+..|+++++.+|+ ...+.++|.++.+.|++++|+..++++++++|+++.+++++|.++..+|++++|
T Consensus 585 ~l~~~Gr~~eAl~~~~~AL~l~P~--~~a~~~LA~~l~~lG~~deA~~~l~~AL~l~Pd~~~a~~nLG~aL~~~G~~eeA 662 (987)
T PRK09782 585 QRYIPGQPELALNDLTRSLNIAPS--ANAYVARATIYRQRHNVPAAVSDLRAALELEPNNSNYQAALGYALWDSGDIAQS 662 (987)
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCC--HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHH
Confidence 334459999999999999999997 577888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcccccccccc
Q 019495 320 QVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 320 ~~~~~~al~l~p~~~~~~ 337 (340)
++.|++|++++|++..++
T Consensus 663 i~~l~~AL~l~P~~~~a~ 680 (987)
T PRK09782 663 REMLERAHKGLPDDPALI 680 (987)
T ss_pred HHHHHHHHHhCCCCHHHH
Confidence 999999999999987654
|
|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.08 E-value=9.3e-10 Score=89.70 Aligned_cols=106 Identities=12% Similarity=-0.012 Sum_probs=97.1
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhh--CCCchHHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII--SPIWHIASYLQA 307 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--~p~~~~a~~~~g 307 (340)
....+..+|..+-..|+.+.|-+.|++|+.++|+ +..+.+|.|--+...|+|++|...|++|+.. .|.-+..|-++|
T Consensus 68 ~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~-~GdVLNNYG~FLC~qg~~~eA~q~F~~Al~~P~Y~~~s~t~eN~G 146 (250)
T COG3063 68 YYLAHLVRAHYYQKLGENDLADESYRKALSLAPN-NGDVLNNYGAFLCAQGRPEEAMQQFERALADPAYGEPSDTLENLG 146 (250)
T ss_pred cHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCC-ccchhhhhhHHHHhCCChHHHHHHHHHHHhCCCCCCcchhhhhhH
Confidence 3446677888899999999999999999999999 9999999999999999999999999999975 466788999999
Q ss_pred HHHHHcCChHHHHHHHHhhhccccccccc
Q 019495 308 AALSAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 308 ~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
.|-.+.|+++.|.++|+++|++||++..+
T Consensus 147 ~Cal~~gq~~~A~~~l~raL~~dp~~~~~ 175 (250)
T COG3063 147 LCALKAGQFDQAEEYLKRALELDPQFPPA 175 (250)
T ss_pred HHHhhcCCchhHHHHHHHHHHhCcCCChH
Confidence 99999999999999999999999998754
|
|
| >PRK15174 Vi polysaccharide export protein VexE; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=7.9e-10 Score=108.16 Aligned_cols=101 Identities=11% Similarity=0.066 Sum_probs=65.6
Q ss_pred HHHHHHhHHhhhcCHHH----HHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 233 NSKKKGDVAFRQKDLKD----AIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~----A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
.+...|..++..|++++ |+..|+++++++|+ +..++..+|.++...|++++|+..++++++++|+++.+++.+|.
T Consensus 248 ~~~~Lg~~l~~~G~~~eA~~~A~~~~~~Al~l~P~-~~~a~~~lg~~l~~~g~~~eA~~~l~~al~l~P~~~~a~~~La~ 326 (656)
T PRK15174 248 LRRSLGLAYYQSGRSREAKLQAAEHWRHALQFNSD-NVRIVTLYADALIRTGQNEKAIPLLQQSLATHPDLPYVRAMYAR 326 (656)
T ss_pred HHHHHHHHHHHcCCchhhHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 34445666666666664 56666666666666 56666666666666666666666666666666666666666666
Q ss_pred HHHHcCChHHHHHHHHhhhccccccc
Q 019495 309 ALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 309 ~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
+|..+|++++|+..|+++++.+|++.
T Consensus 327 ~l~~~G~~~eA~~~l~~al~~~P~~~ 352 (656)
T PRK15174 327 ALRQVGQYTAASDEFVQLAREKGVTS 352 (656)
T ss_pred HHHHCCCHHHHHHHHHHHHHhCccch
Confidence 66666666666666666666666543
|
|
| >PRK15174 Vi polysaccharide export protein VexE; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.1e-09 Score=107.08 Aligned_cols=104 Identities=17% Similarity=0.029 Sum_probs=97.4
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 309 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 309 (340)
....+...|..+...|++++|+..|+++++++|+ ++.++.+++.+|...|++++|+..++++++.+|++..+++.+|.+
T Consensus 283 ~~~a~~~lg~~l~~~g~~~eA~~~l~~al~l~P~-~~~a~~~La~~l~~~G~~~eA~~~l~~al~~~P~~~~~~~~~a~a 361 (656)
T PRK15174 283 NVRIVTLYADALIRTGQNEKAIPLLQQSLATHPD-LPYVRAMYARALRQVGQYTAASDEFVQLAREKGVTSKWNRYAAAA 361 (656)
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCccchHHHHHHHHH
Confidence 3456678899999999999999999999999999 889999999999999999999999999999999999888888999
Q ss_pred HHHcCChHHHHHHHHhhhccccccc
Q 019495 310 LSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 310 ~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
+..+|++++|+..|+++++++|++.
T Consensus 362 l~~~G~~deA~~~l~~al~~~P~~~ 386 (656)
T PRK15174 362 LLQAGKTSEAESVFEHYIQARASHL 386 (656)
T ss_pred HHHCCCHHHHHHHHHHHHHhChhhc
Confidence 9999999999999999999999864
|
|
| >TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.4e-09 Score=91.91 Aligned_cols=104 Identities=15% Similarity=0.080 Sum_probs=93.3
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcC--CCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAG--TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
...+...|..++..|++++|++.|.++++.. +. ....+.++|.++...|++++|+..++++++.+|++..+++.+|.
T Consensus 99 ~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~ 177 (234)
T TIGR02521 99 GDVLNNYGTFLCQQGKYEQAMQQFEQAIEDPLYPQ-PARSLENAGLCALKAGDFDKAEKYLTRALQIDPQRPESLLELAE 177 (234)
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCChHHHHHHHH
Confidence 3467788999999999999999999999864 33 55678889999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHhhhcccccccc
Q 019495 309 ALSAMGMENEAQVALKEGTTLEAKKNS 335 (340)
Q Consensus 309 ~~~~~~~~~~A~~~~~~al~l~p~~~~ 335 (340)
++...|++++|+..+++++++.|.+..
T Consensus 178 ~~~~~~~~~~A~~~~~~~~~~~~~~~~ 204 (234)
T TIGR02521 178 LYYLRGQYKDARAYLERYQQTYNQTAE 204 (234)
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHH
Confidence 999999999999999999999776543
|
Members of this family are designated PilF in ref (PubMed:8973346) and PilW in ref (PubMed:15612916). This outer membrane protein is required both for pilus stability and for pilus function such as adherence to human cells. Members of this family contain copies of the TPR (tetratricopeptide repeat) domain. |
| >TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD | Back alignment and domain information |
|---|
Probab=99.05 E-value=6e-10 Score=86.63 Aligned_cols=84 Identities=11% Similarity=-0.048 Sum_probs=78.9
Q ss_pred HHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccc
Q 019495 252 ECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEA 331 (340)
Q Consensus 252 ~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p 331 (340)
+.|+++++.+|+ +......+|.+++..|++++|++.+++++..+|+++.+++++|.++..+|++++|...|+++++++|
T Consensus 4 ~~~~~~l~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p 82 (135)
T TIGR02552 4 ATLKDLLGLDSE-QLEQIYALAYNLYQQGRYDEALKLFQLLAAYDPYNSRYWLGLAACCQMLKEYEEAIDAYALAAALDP 82 (135)
T ss_pred hhHHHHHcCChh-hHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 467899999999 7788888999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q 019495 332 KKNST 336 (340)
Q Consensus 332 ~~~~~ 336 (340)
++...
T Consensus 83 ~~~~~ 87 (135)
T TIGR02552 83 DDPRP 87 (135)
T ss_pred CChHH
Confidence 87654
|
ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array. |
| >PF13429 TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.04 E-value=4.1e-10 Score=99.04 Aligned_cols=107 Identities=13% Similarity=-0.013 Sum_probs=92.9
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
.+...+...|..+.+.|++++|++.|+++++++|+ +..+...++..++..|+++++.+.++...+..|+++..+..+|.
T Consensus 144 ~~~~~~~~~a~~~~~~G~~~~A~~~~~~al~~~P~-~~~~~~~l~~~li~~~~~~~~~~~l~~~~~~~~~~~~~~~~la~ 222 (280)
T PF13429_consen 144 DSARFWLALAEIYEQLGDPDKALRDYRKALELDPD-DPDARNALAWLLIDMGDYDEAREALKRLLKAAPDDPDLWDALAA 222 (280)
T ss_dssp T-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-TT--HHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-HTSCCHCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCcCHHHHHHHHHH
Confidence 44567888999999999999999999999999999 88889889999999999999888888888888999999999999
Q ss_pred HHHHcCChHHHHHHHHhhhccccccccc
Q 019495 309 ALSAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 309 ~~~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
++..+|++++|+.+|+++++.+|+|...
T Consensus 223 ~~~~lg~~~~Al~~~~~~~~~~p~d~~~ 250 (280)
T PF13429_consen 223 AYLQLGRYEEALEYLEKALKLNPDDPLW 250 (280)
T ss_dssp HHHHHT-HHHHHHHHHHHHHHSTT-HHH
T ss_pred Hhcccccccccccccccccccccccccc
Confidence 9999999999999999999999988643
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.7e-09 Score=104.96 Aligned_cols=103 Identities=12% Similarity=-0.024 Sum_probs=97.6
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
+........|..+.+.+++++|+..+++++..+|+ ++..++.+|.++..+|+|++|+..|++++.-+|++++++..+|.
T Consensus 118 d~~~a~~~~a~~L~~~~~~eeA~~~~~~~l~~~p~-~~~~~~~~a~~l~~~g~~~~A~~~y~~~~~~~p~~~~~~~~~a~ 196 (694)
T PRK15179 118 DSSEAFILMLRGVKRQQGIEAGRAEIELYFSGGSS-SAREILLEAKSWDEIGQSEQADACFERLSRQHPEFENGYVGWAQ 196 (694)
T ss_pred CcHHHHHHHHHHHHHhccHHHHHHHHHHHhhcCCC-CHHHHHHHHHHHHHhcchHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 45567788999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHhhhccccc
Q 019495 309 ALSAMGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 309 ~~~~~~~~~~A~~~~~~al~l~p~ 332 (340)
++...|+.++|...|++|++....
T Consensus 197 ~l~~~G~~~~A~~~~~~a~~~~~~ 220 (694)
T PRK15179 197 SLTRRGALWRARDVLQAGLDAIGD 220 (694)
T ss_pred HHHHcCCHHHHHHHHHHHHHhhCc
Confidence 999999999999999999987654
|
|
| >COG4235 Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.1e-09 Score=91.60 Aligned_cols=109 Identities=17% Similarity=0.053 Sum_probs=99.5
Q ss_pred hhHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcC---ChHHHHHHHHHHhhhCCCchH
Q 019495 225 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD---MPQDALNDAMQAQIISPIWHI 301 (340)
Q Consensus 225 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~al~~~p~~~~ 301 (340)
.++-++++.|...|..++..|++..|...|.+|+++.|+ ++..+.-+|.++.... .-.+|...+++++++||++..
T Consensus 150 ~~nP~d~egW~~Lg~~ym~~~~~~~A~~AY~~A~rL~g~-n~~~~~g~aeaL~~~a~~~~ta~a~~ll~~al~~D~~~ir 228 (287)
T COG4235 150 QQNPGDAEGWDLLGRAYMALGRASDALLAYRNALRLAGD-NPEILLGLAEALYYQAGQQMTAKARALLRQALALDPANIR 228 (287)
T ss_pred HhCCCCchhHHHHHHHHHHhcchhHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhcCCccHH
Confidence 455677889999999999999999999999999999999 9999998888766533 467899999999999999999
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHhhhccccccc
Q 019495 302 ASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 302 a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
+.+.+|..+++.|+|++|+..++..|+..|.+.
T Consensus 229 al~lLA~~afe~g~~~~A~~~Wq~lL~~lp~~~ 261 (287)
T COG4235 229 ALSLLAFAAFEQGDYAEAAAAWQMLLDLLPADD 261 (287)
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhcCCCCC
Confidence 999999999999999999999999999999865
|
|
| >COG5010 TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.02 E-value=3e-09 Score=88.47 Aligned_cols=101 Identities=12% Similarity=-0.000 Sum_probs=94.7
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHH
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 312 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 312 (340)
-+...|...+..|+|.+|+..+.++..+.|+ ++..|+.+|.+|.+.|++++|-..|.+|+++.|+.+....|+|..|+.
T Consensus 102 ll~~~gk~~~~~g~~~~A~~~~rkA~~l~p~-d~~~~~~lgaaldq~Gr~~~Ar~ay~qAl~L~~~~p~~~nNlgms~~L 180 (257)
T COG5010 102 LLAAQGKNQIRNGNFGEAVSVLRKAARLAPT-DWEAWNLLGAALDQLGRFDEARRAYRQALELAPNEPSIANNLGMSLLL 180 (257)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHhccCCC-ChhhhhHHHHHHHHccChhHHHHHHHHHHHhccCCchhhhhHHHHHHH
Confidence 3344899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHhhhccccccc
Q 019495 313 MGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 313 ~~~~~~A~~~~~~al~l~p~~~ 334 (340)
.|+++.|...+..+....+.+.
T Consensus 181 ~gd~~~A~~lll~a~l~~~ad~ 202 (257)
T COG5010 181 RGDLEDAETLLLPAYLSPAADS 202 (257)
T ss_pred cCCHHHHHHHHHHHHhCCCCch
Confidence 9999999999999987766554
|
|
| >KOG2076 consensus RNA polymerase III transcription factor TFIIIC [Transcription] | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.9e-09 Score=101.61 Aligned_cols=105 Identities=18% Similarity=0.102 Sum_probs=99.5
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
.....+...||.+|..|++++|.+.+.++|+++|. ++..|..+|.||..+|+.++|+...-.|-.++|++.+.|...+.
T Consensus 137 ~~l~~ll~eAN~lfarg~~eeA~~i~~EvIkqdp~-~~~ay~tL~~IyEqrGd~eK~l~~~llAAHL~p~d~e~W~~lad 215 (895)
T KOG2076|consen 137 PELRQLLGEANNLFARGDLEEAEEILMEVIKQDPR-NPIAYYTLGEIYEQRGDIEKALNFWLLAAHLNPKDYELWKRLAD 215 (895)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcc-chhhHHHHHHHHHHcccHHHHHHHHHHHHhcCCCChHHHHHHHH
Confidence 34678889999999999999999999999999999 88999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHhhhccccccc
Q 019495 309 ALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 309 ~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
...++|++++|.-+|.+|++++|.+.
T Consensus 216 ls~~~~~i~qA~~cy~rAI~~~p~n~ 241 (895)
T KOG2076|consen 216 LSEQLGNINQARYCYSRAIQANPSNW 241 (895)
T ss_pred HHHhcccHHHHHHHHHHHHhcCCcch
Confidence 99999999999999999999999874
|
|
| >PF13371 TPR_9: Tetratricopeptide repeat | Back alignment and domain information |
|---|
Probab=99.02 E-value=6.3e-10 Score=76.62 Aligned_cols=64 Identities=22% Similarity=0.321 Sum_probs=32.0
Q ss_pred HHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHH
Q 019495 240 VAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 304 (340)
Q Consensus 240 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 304 (340)
.++..++|++|++.++.+++++|+ ++..+..+|.++..+|++.+|+++++++++..|++..+..
T Consensus 4 ~~~~~~~~~~A~~~~~~~l~~~p~-~~~~~~~~a~~~~~~g~~~~A~~~l~~~l~~~p~~~~~~~ 67 (73)
T PF13371_consen 4 IYLQQEDYEEALEVLERALELDPD-DPELWLQRARCLFQLGRYEEALEDLERALELSPDDPDARA 67 (73)
T ss_pred HHHhCCCHHHHHHHHHHHHHhCcc-cchhhHHHHHHHHHhccHHHHHHHHHHHHHHCCCcHHHHH
Confidence 344455555555555555555555 4444444555555555555555555555555554444433
|
|
| >KOG4162 consensus Predicted calmodulin-binding protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.9e-09 Score=100.09 Aligned_cols=104 Identities=15% Similarity=0.101 Sum_probs=96.3
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHH--HHHHHhhhCCCchHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALN--DAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~--~~~~al~~~p~~~~a~~~~g~ 308 (340)
...++..|..+..+|.+++|.+.|..|+.++|+ ......-+|.++...|+..-|.. ....|+++||.++++||++|.
T Consensus 684 ~~~~~~~G~~~~~~~~~~EA~~af~~Al~ldP~-hv~s~~Ala~~lle~G~~~la~~~~~L~dalr~dp~n~eaW~~LG~ 762 (799)
T KOG4162|consen 684 ASVYYLRGLLLEVKGQLEEAKEAFLVALALDPD-HVPSMTALAELLLELGSPRLAEKRSLLSDALRLDPLNHEAWYYLGE 762 (799)
T ss_pred HHHHHHhhHHHHHHHhhHHHHHHHHHHHhcCCC-CcHHHHHHHHHHHHhCCcchHHHHHHHHHHHhhCCCCHHHHHHHHH
Confidence 346788899999999999999999999999999 67777789999999998777777 999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHhhhcccccccc
Q 019495 309 ALSAMGMENEAQVALKEGTTLEAKKNS 335 (340)
Q Consensus 309 ~~~~~~~~~~A~~~~~~al~l~p~~~~ 335 (340)
++..+|+.++|.++|..|+++++.++.
T Consensus 763 v~k~~Gd~~~Aaecf~aa~qLe~S~PV 789 (799)
T KOG4162|consen 763 VFKKLGDSKQAAECFQAALQLEESNPV 789 (799)
T ss_pred HHHHccchHHHHHHHHHHHhhccCCCc
Confidence 999999999999999999999998763
|
|
| >PRK10049 pgaA outer membrane protein PgaA; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=3.3e-09 Score=105.80 Aligned_cols=104 Identities=10% Similarity=-0.038 Sum_probs=98.3
Q ss_pred HHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHH
Q 019495 232 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 311 (340)
Q Consensus 232 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 311 (340)
..+...|..+...|++++|++.|+++++.+|. ++.++..++.++...|++.+|+..++++++.+|++.. ++.+|.++.
T Consensus 50 ~~~~~lA~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~la~~l~~~g~~~eA~~~l~~~l~~~P~~~~-~~~la~~l~ 127 (765)
T PRK10049 50 RGYAAVAVAYRNLKQWQNSLTLWQKALSLEPQ-NDDYQRGLILTLADAGQYDEALVKAKQLVSGAPDKAN-LLALAYVYK 127 (765)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHH
Confidence 35788899999999999999999999999999 8888999999999999999999999999999999999 999999999
Q ss_pred HcCChHHHHHHHHhhhcccccccccc
Q 019495 312 AMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 312 ~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
..|++++|+..|+++++++|++..++
T Consensus 128 ~~g~~~~Al~~l~~al~~~P~~~~~~ 153 (765)
T PRK10049 128 RAGRHWDELRAMTQALPRAPQTQQYP 153 (765)
T ss_pred HCCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999987653
|
|
| >PF13512 TPR_18: Tetratricopeptide repeat | Back alignment and domain information |
|---|
Probab=99.00 E-value=5.6e-09 Score=79.79 Aligned_cols=106 Identities=8% Similarity=0.046 Sum_probs=95.4
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCc--chHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCch---HHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH---IASYL 305 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~---~a~~~ 305 (340)
...+...|...++.|+|++|++.++.....-|.. ...+-..++.+|++.+++.+|+..+++-++++|+++ .++|.
T Consensus 10 ~~~ly~~a~~~l~~~~Y~~A~~~le~L~~ryP~g~ya~qAqL~l~yayy~~~~y~~A~a~~~rFirLhP~hp~vdYa~Y~ 89 (142)
T PF13512_consen 10 PQELYQEAQEALQKGNYEEAIKQLEALDTRYPFGEYAEQAQLDLAYAYYKQGDYEEAIAAYDRFIRLHPTHPNVDYAYYM 89 (142)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCCccHHHHH
Confidence 4578899999999999999999999999988862 457788899999999999999999999999999875 56999
Q ss_pred HHHHHHHcCC---------------hHHHHHHHHhhhccccccccc
Q 019495 306 QAAALSAMGM---------------ENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 306 ~g~~~~~~~~---------------~~~A~~~~~~al~l~p~~~~~ 336 (340)
+|.+++.+.. ..+|...|+..++.-|+..-|
T Consensus 90 ~gL~~~~~~~~~~~~~~~~drD~~~~~~A~~~f~~lv~~yP~S~ya 135 (142)
T PF13512_consen 90 RGLSYYEQDEGSLQSFFRSDRDPTPARQAFRDFEQLVRRYPNSEYA 135 (142)
T ss_pred HHHHHHHHhhhHHhhhcccccCcHHHHHHHHHHHHHHHHCcCChhH
Confidence 9999999988 999999999999999987643
|
|
| >PLN03098 LPA1 LOW PSII ACCUMULATION1; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.3e-09 Score=98.12 Aligned_cols=70 Identities=13% Similarity=0.162 Sum_probs=59.3
Q ss_pred hHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchH---HhhhhHHHHHhcCChHHHHHHHHHHhhhC
Q 019495 226 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT---VYARRSLCYLMSDMPQDALNDAMQAQIIS 296 (340)
Q Consensus 226 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~---~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 296 (340)
.+-+....+.+.|..++..|+|++|+..|++||+++|+ +.. +|+++|.||..+|++++|+.++++|+++.
T Consensus 70 ~dP~~a~a~~NLG~AL~~lGryeEAIa~f~rALeL~Pd-~aeA~~A~yNLAcaya~LGr~dEAla~LrrALels 142 (453)
T PLN03098 70 ADVKTAEDAVNLGLSLFSKGRVKDALAQFETALELNPN-PDEAQAAYYNKACCHAYREEGKKAADCLRTALRDY 142 (453)
T ss_pred CCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-chHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc
Confidence 46677788888899999999999999999999999998 654 48888999999999999999999998873
|
|
| >KOG1155 consensus Anaphase-promoting complex (APC), Cdc23 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.9e-09 Score=93.99 Aligned_cols=104 Identities=16% Similarity=0.054 Sum_probs=96.0
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 309 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 309 (340)
....|.-.|.++...++-..|++.|+.|++++|. +.-+|+-+|..|..++-+.=|+-+|++|+++.|+|+..|-.+|.|
T Consensus 363 ~~~aWTLmGHEyvEmKNt~AAi~sYRrAvdi~p~-DyRAWYGLGQaYeim~Mh~YaLyYfqkA~~~kPnDsRlw~aLG~C 441 (559)
T KOG1155|consen 363 YLSAWTLMGHEYVEMKNTHAAIESYRRAVDINPR-DYRAWYGLGQAYEIMKMHFYALYYFQKALELKPNDSRLWVALGEC 441 (559)
T ss_pred hhHHHHHhhHHHHHhcccHHHHHHHHHHHhcCch-hHHHHhhhhHHHHHhcchHHHHHHHHHHHhcCCCchHHHHHHHHH
Confidence 3345667788999999999999999999999999 889999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHhhhccccccc
Q 019495 310 LSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 310 ~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
|..+++.+||+.+|++|+...-.+.
T Consensus 442 Y~kl~~~~eAiKCykrai~~~dte~ 466 (559)
T KOG1155|consen 442 YEKLNRLEEAIKCYKRAILLGDTEG 466 (559)
T ss_pred HHHhccHHHHHHHHHHHHhccccch
Confidence 9999999999999999998776543
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.5e-10 Score=106.77 Aligned_cols=145 Identities=19% Similarity=0.285 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCcc-------------ccCCcccCcccccCC
Q 019495 10 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY-------------STNLAFTPPEYLRTG 76 (340)
Q Consensus 10 ~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-------------~~~~~y~aPE~~~~~ 76 (340)
+.++++||.|+|....+||++|.|++|+++..|..|++.|++.........+ ....-|.+||++.+.
T Consensus 105 l~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~ 184 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT 184 (700)
T ss_pred hhcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence 3456689999998866999999999999999999999999987654432211 124569999999887
Q ss_pred CCCCCcceehHHHHHHHHhhCCCC-CCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHI-PPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i 155 (340)
..+.++|+||+|+++|.+..|+.+ +........... ....+..-....+...++++.+=+.+++..++.-||++.++
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~--~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l 262 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSF--SRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLL 262 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchhhccCCcchhhh--hhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhh
Confidence 789999999999999999854433 322111111111 11111111112345567889999999999999999977766
Q ss_pred H
Q 019495 156 V 156 (340)
Q Consensus 156 ~ 156 (340)
.
T Consensus 263 ~ 263 (700)
T KOG2137|consen 263 L 263 (700)
T ss_pred h
Confidence 5
|
|
| >PRK11447 cellulose synthase subunit BcsC; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=3e-09 Score=110.83 Aligned_cols=107 Identities=11% Similarity=0.015 Sum_probs=92.1
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchH--------------HhhhhHHHHHhcCChHHHHHHHHHHhhh
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT--------------VYARRSLCYLMSDMPQDALNDAMQAQII 295 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~--------------~~~~~~~~~~~~~~~~~A~~~~~~al~~ 295 (340)
+...+...|..++..|++++|+..|+++++.+|+ +.. .....+.++...|++++|+..|++++++
T Consensus 302 ~~~a~~~Lg~~~~~~g~~~eA~~~l~~Al~~~p~-~~~~~~~~~ll~~~~~~~~~~~g~~~~~~g~~~eA~~~~~~Al~~ 380 (1157)
T PRK11447 302 DSEALGALGQAYSQQGDRARAVAQFEKALALDPH-SSNRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERLYQQARQV 380 (1157)
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ccchhHHHHHHHhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 4456778889999999999999999999999987 321 1224477888899999999999999999
Q ss_pred CCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 296 SPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 296 ~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
+|++..+++.+|.++..+|++++|++.|+++++++|.+..++
T Consensus 381 ~P~~~~a~~~Lg~~~~~~g~~~eA~~~y~~aL~~~p~~~~a~ 422 (1157)
T PRK11447 381 DNTDSYAVLGLGDVAMARKDYAAAERYYQQALRMDPGNTNAV 422 (1157)
T ss_pred CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999999999999999987654
|
|
| >KOG1125 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.9e-09 Score=96.41 Aligned_cols=111 Identities=16% Similarity=0.097 Sum_probs=91.8
Q ss_pred hHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcc----------------------------------------
Q 019495 226 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---------------------------------------- 265 (340)
Q Consensus 226 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~---------------------------------------- 265 (340)
+..+.++.|...|..+...++-..||.++.++++++|+ +
T Consensus 314 qdP~haeAW~~LG~~qaENE~E~~ai~AL~rcl~LdP~-NleaLmaLAVSytNeg~q~~Al~~L~~Wi~~~p~y~~l~~a 392 (579)
T KOG1125|consen 314 QDPQHAEAWQKLGITQAENENEQNAISALRRCLELDPT-NLEALMALAVSYTNEGLQNQALKMLDKWIRNKPKYVHLVSA 392 (579)
T ss_pred hChHHHHHHHHhhhHhhhccchHHHHHHHHHHHhcCCc-cHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCccchhcccc
Confidence 44566777777777777777777777777777777777 3
Q ss_pred -------------------------------------hHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 266 -------------------------------------PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 266 -------------------------------------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
+.+..-+|..|...|+|++|+..|+.||..+|++...|+++|.
T Consensus 393 ~~~~~~~~~~s~~~~~~l~~i~~~fLeaa~~~~~~~DpdvQ~~LGVLy~ls~efdraiDcf~~AL~v~Pnd~~lWNRLGA 472 (579)
T KOG1125|consen 393 GENEDFENTKSFLDSSHLAHIQELFLEAARQLPTKIDPDVQSGLGVLYNLSGEFDRAVDCFEAALQVKPNDYLLWNRLGA 472 (579)
T ss_pred CccccccCCcCCCCHHHHHHHHHHHHHHHHhCCCCCChhHHhhhHHHHhcchHHHHHHHHHHHHHhcCCchHHHHHHhhH
Confidence 2344555667777899999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 309 ALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 309 ~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
.+..-.+.+||+.+|++||+|-|....++
T Consensus 473 tLAN~~~s~EAIsAY~rALqLqP~yVR~R 501 (579)
T KOG1125|consen 473 TLANGNRSEEAISAYNRALQLQPGYVRVR 501 (579)
T ss_pred HhcCCcccHHHHHHHHHHHhcCCCeeeee
Confidence 99999999999999999999999977664
|
|
| >PF13371 TPR_9: Tetratricopeptide repeat | Back alignment and domain information |
|---|
Probab=98.96 E-value=4e-09 Score=72.54 Aligned_cols=64 Identities=20% Similarity=0.135 Sum_probs=60.8
Q ss_pred HHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhccccccccc
Q 019495 273 SLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 273 ~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
..+|+..+++++|++.++++++++|+++.+|+.+|.++..+|++++|+++|+++++++|++..+
T Consensus 2 ~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~g~~~~A~~~l~~~l~~~p~~~~~ 65 (73)
T PF13371_consen 2 KQIYLQQEDYEEALEVLERALELDPDDPELWLQRARCLFQLGRYEEALEDLERALELSPDDPDA 65 (73)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhCcccchhhHHHHHHHHHhccHHHHHHHHHHHHHHCCCcHHH
Confidence 5678999999999999999999999999999999999999999999999999999999987654
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 340 | ||||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 4e-13 | ||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 4e-13 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 4e-10 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 1e-09 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 3e-09 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 4e-09 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 4e-09 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 4e-08 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 4e-07 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 5e-07 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 2e-06 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 3e-06 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 3e-06 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 3e-06 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 4e-06 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 4e-06 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 4e-06 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 4e-06 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 4e-06 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 5e-06 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 5e-06 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 6e-06 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 6e-06 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 9e-06 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 9e-06 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 9e-06 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 1e-05 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 1e-05 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 1e-05 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 1e-05 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 1e-05 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 1e-05 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 1e-05 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 1e-05 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 1e-05 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 1e-05 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 1e-05 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 1e-05 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 1e-05 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 2e-05 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 2e-05 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 2e-05 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 2e-05 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 2e-05 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 2e-05 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 2e-05 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 2e-05 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 2e-05 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 2e-05 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 2e-05 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 2e-05 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 2e-05 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 2e-05 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 2e-05 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 2e-05 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 2e-05 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 2e-05 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 2e-05 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 2e-05 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 2e-05 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 2e-05 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 2e-05 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 3e-05 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 3e-05 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 3e-05 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 3e-05 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 3e-05 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 3e-05 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 3e-05 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 3e-05 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 3e-05 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 4e-05 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 4e-05 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 4e-05 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 4e-05 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 4e-05 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 4e-05 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 4e-05 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 4e-05 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 4e-05 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 4e-05 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 4e-05 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 4e-05 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 5e-05 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 5e-05 | ||
| 4fvr_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain M | 5e-05 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 5e-05 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 5e-05 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 5e-05 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 5e-05 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 5e-05 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 5e-05 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 5e-05 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 5e-05 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 5e-05 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 5e-05 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 5e-05 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 6e-05 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 6e-05 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 6e-05 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 6e-05 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 6e-05 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 6e-05 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 6e-05 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 6e-05 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 6e-05 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 6e-05 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 7e-05 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 7e-05 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 7e-05 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 7e-05 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 7e-05 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 7e-05 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 7e-05 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 8e-05 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 8e-05 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 8e-05 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 8e-05 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 8e-05 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 8e-05 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 8e-05 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 9e-05 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 9e-05 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 1e-04 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 1e-04 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 1e-04 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 1e-04 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 1e-04 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 1e-04 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 1e-04 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 1e-04 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 1e-04 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 1e-04 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 1e-04 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 1e-04 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 2e-04 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 2e-04 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-04 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 2e-04 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 2e-04 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 2e-04 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 2e-04 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 2e-04 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 2e-04 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 3e-04 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 3e-04 | ||
| 1elw_A | 118 | Crystal Structure Of The Tpr1 Domain Of Hop In Comp | 3e-04 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 3e-04 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 3e-04 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 3e-04 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 3e-04 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 3e-04 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 3e-04 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 3e-04 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 3e-04 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 3e-04 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 3e-04 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 3e-04 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 3e-04 | ||
| 3hng_A | 360 | Crystal Structure Of Vegfr1 In Complex With N-(4-ch | 3e-04 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 3e-04 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 3e-04 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 3e-04 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 3e-04 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 3e-04 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 3e-04 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 3e-04 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 4e-04 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 4e-04 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 4e-04 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 4e-04 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 4e-04 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 4e-04 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 4e-04 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 4e-04 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 5e-04 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 5e-04 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 5e-04 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 6e-04 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 6e-04 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 6e-04 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 7e-04 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 7e-04 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 7e-04 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 7e-04 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 7e-04 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 7e-04 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 7e-04 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 7e-04 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 7e-04 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 8e-04 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 8e-04 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 8e-04 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 8e-04 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 8e-04 | ||
| 3vhk_A | 368 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 8e-04 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 8e-04 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 8e-04 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 8e-04 | ||
| 3cjf_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 8e-04 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 8e-04 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 8e-04 | ||
| 1y6a_A | 366 | Crystal Structure Of Vegfr2 In Complex With A 2-Ani | 8e-04 | ||
| 3vnt_A | 318 | Crystal Structure Of The Kinase Domain Of Human Veg | 8e-04 | ||
| 2qr8_A | 342 | 2.0a X-ray Structure Of C-terminal Kinase Domain Of | 8e-04 | ||
| 3vid_A | 356 | Crystal Structure Of Human Vegfr2 Kinase Domain Wit | 9e-04 | ||
| 3vhe_A | 359 | Crystal Structure Of Human Vegfr2 Kinase Domain Wit | 9e-04 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 9e-04 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 9e-04 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 9e-04 | ||
| 4agc_A | 353 | Crystal Structure Of Vegfr2 (Juxtamembrane And Kina | 9e-04 |
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|1ELW|A Chain A, Crystal Structure Of The Tpr1 Domain Of Hop In Complex With A Hsc70 Peptide Length = 118 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318 | Back alignment and structure |
|
| >pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342 | Back alignment and structure |
|
| >pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356 | Back alignment and structure |
|
| >pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 1e-26
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 20/179 (11%)
Query: 1 MKWAMRLRVVLHLAQALEY--CTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 58
+ W R R+ L A+ L Y + ++ D+ A IL DE+ + FGL K
Sbjct: 128 LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 187
Query: 59 KSY-STNLAFT----PPEYLRTGRVTPESVIYSFGTLLLDLLSGK-----HIPP------ 102
++ +T + T PEYL TG+ + ++ ++ +G +LL+L++G+
Sbjct: 188 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 247
Query: 103 --SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 159
L++++ L+ L D L+G + D++ +L+++A C Q P ERP +V L
Sbjct: 248 LLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 1e-25
Identities = 43/185 (23%), Positives = 82/185 (44%), Gaps = 31/185 (16%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR------ILFDEDGNPRLSTFGLMK- 53
+ W MR ++ A + + L+ + + +R IL DE ++S FGL +
Sbjct: 130 LSWHMRCKIAQGAANGINF-------LHENHHIHRDIKSANILLDEAFTAKISDFGLARA 182
Query: 54 NSRDGKSY-STNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGK-----HIPPS 103
+ + ++ ++ + T PE L G +TP+S IYSFG +LL++++G H P
Sbjct: 183 SEKFAQTVMTSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 241
Query: 104 HALD-----LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 158
LD ++ ++ D + + +AS+CL + +RP+ K +
Sbjct: 242 LLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 300
Query: 159 LSPLQ 163
L +
Sbjct: 301 LQEMT 305
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 98.0 bits (245), Expect = 1e-23
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 18/176 (10%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDGK 59
M W RL + + A+ L Y ++ D+ + IL DE+ P+++ FG+ K + +
Sbjct: 136 MSWEQRLEICIGAARGLHY-LHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQ 194
Query: 60 SY-STNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSH------ 104
++ ST + T PEY GR+T +S +YSFG +L ++L + P
Sbjct: 195 THLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAE 254
Query: 105 -ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 159
A++ + L+ + D L + + + A +CL +RP+ ++ L
Sbjct: 255 WAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 Length = 118 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 1e-14
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 228 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT---VYARRSLCYLMSDMPQD 284
M++ K+KG+ A ++ DA++CY++ I + P +Y+ RS Y Q
Sbjct: 1 MEQVNELKEKGNKALSVGNIDDALQCYSEAIK----LDPHNHVLYSNRSAAYAKKGDYQK 56
Query: 285 ALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337
A D + + P W +AAAL + EA+ +EG E N
Sbjct: 57 AYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHE-ANNPQL 108
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} Length = 164 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 4e-14
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Query: 235 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 294
K +G+ A +K+ AI+ YTQ + +P + R+ Y S + A DA A +
Sbjct: 15 KSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATV 73
Query: 295 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 340
+ P + A A M A+ A ++G E S A ++
Sbjct: 74 VDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKR 119
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 7e-14
Identities = 37/179 (20%), Positives = 77/179 (43%), Gaps = 19/179 (10%)
Query: 3 WAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY 61
RL + +A+ + Y ++ + H +L + +L D+ ++ FGL +
Sbjct: 136 ERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS 195
Query: 62 STNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRN 113
S + A TP PE LR +S +YSFG +L +L + + ++ P+ + + +
Sbjct: 196 SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC 255
Query: 114 LQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSH 171
++ + + ++ + C EP +RP+ +++ L PL K P +
Sbjct: 256 KRLEIPRNLNP---------QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPN 305
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} Length = 133 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 4e-13
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Query: 235 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 294
K KG+ F++ D A++ YT+ I +Y+ R+ CY Q AL D +
Sbjct: 20 KNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQ 78
Query: 295 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 340
+ P + +AAAL AM +A ++ L+ A
Sbjct: 79 LEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLD-SSCKEAADG 123
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 Length = 281 | Back alignment and structure |
|---|
Score = 67.3 bits (164), Expect = 5e-13
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 235 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 294
K++G+ F + +A CY + I + Y R+LCYL P+ AL D +A
Sbjct: 8 KEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALE 66
Query: 295 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 340
+ A + M +EA L+ +L ++ G
Sbjct: 67 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDD 112
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* Length = 137 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 6e-13
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 7/109 (6%)
Query: 235 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTV---YARRSLCYLMSDMPQDALNDAMQ 291
K++G+ F + +A CY + I +P V Y R+LCYL P+ AL D +
Sbjct: 13 KEQGNRLFVGRKYPEAAACYGRAIT----RNPLVAVYYTNRALCYLKMQQPEQALADCRR 68
Query: 292 AQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 340
A + A + M +EA L+ +L ++ G
Sbjct: 69 ALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDD 117
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} Length = 126 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 6e-13
Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Query: 235 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 294
K KG+ F++ D A+ Y + + + +Y+ R+ C Q AL+D
Sbjct: 17 KNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIR 75
Query: 295 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337
+ + +AA L AM ++AQ A ++ ++ N A
Sbjct: 76 LDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVD-PSNEEA 117
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A Length = 166 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 1e-12
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 226 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDA 285
++ K + + F+ KD ++AI+ Y+Q I+ + Y RSL YL ++ A
Sbjct: 8 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIEL-NPSNAIYYGNRSLAYLRTECYGYA 66
Query: 286 LNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 330
L DA +A + + Y +AA+ A+G A + ++
Sbjct: 67 LGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVK 111
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 65.3 bits (160), Expect = 2e-12
Identities = 29/174 (16%), Positives = 64/174 (36%), Gaps = 19/174 (10%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGK 59
+ + ++ L +A+ + + + + LN+ ++ DED R+S + K S
Sbjct: 108 VDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADV-KFSFQSP 166
Query: 60 SYSTNLAFTPPEYLRTGRVTPESV---IYSFGTLLLDLLSGK----HIPPSHALDLIRDR 112
A+ PE L+ ++SF LL +L++ + + +
Sbjct: 167 GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALE 226
Query: 113 NLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 165
L+ + + +L C+ +P +RP +V L +Q +
Sbjct: 227 GLRPTIPPGISP---------HVSKLMKICMNEDPAKRPKFDMIVPILEKMQDK 271
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 3e-12
Identities = 38/179 (21%), Positives = 74/179 (41%), Gaps = 20/179 (11%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGL--MKNSRD 57
+ + + A+ ++Y +K + H DL + I ED ++ FGL K+
Sbjct: 117 FEMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS 174
Query: 58 GKSYSTNLAFTP----PEYLRTGRVTPESV---IYSFGTLLLDLLSGK----HIPPSHAL 106
G L+ + PE +R P S +Y+FG +L +L++G+ +I +
Sbjct: 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 234
Query: 107 DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 165
+ R S + + + RL + CL+ + ERP+ ++ + L +E
Sbjct: 235 IEMVGRGSLSPDLS----KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELARE 289
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 148 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 3e-12
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 235 KKKGDVAFRQKDLKDAIECYTQFI--DAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQA 292
+K+G+ F+ D A+ YTQ + DA ++ R+ C+L + A +A +A
Sbjct: 32 RKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKA 91
Query: 293 QIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337
A Y ++ AL +G ++A + L+ +LE KN
Sbjct: 92 IEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLE-PKNKVF 135
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 64.7 bits (157), Expect = 7e-12
Identities = 27/163 (16%), Positives = 46/163 (28%), Gaps = 15/163 (9%)
Query: 4 AMRLRVVLHLAQALEYCTSKGRALYH-DL---NAYRILFDEDGNPRLSTFGL-MKNSRDG 58
+ L + SKG L H N + DG L K G
Sbjct: 194 LALHILTAQLIRLAANLQSKG--LVHGHFTPDN---LFIMPDGRLMLGDVSALWKVGTRG 248
Query: 59 KSYSTNLAFTPPEYL--RTGRVTPESVIYSFGTLLLDLLSGK---HIPPSHALDLIRDRN 113
+ S + + P E+L T T + G + + + + +
Sbjct: 249 PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPS 308
Query: 114 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156
L++ L + L R L ++ R R P +
Sbjct: 309 LRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAM 351
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 Length = 131 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 1e-11
Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 12/108 (11%)
Query: 235 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT---VYARRSLCYLMSDMPQDALNDAMQ 291
K +G+ + ++ + A+ Y + I+ ++P + R+ Y A+ D +
Sbjct: 16 KTEGNEQMKVENFEAAVHFYGKAIE----LNPANAVYFCNRAAAYSKLGNYAGAVQDCER 71
Query: 292 AQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE-----AKKN 334
A I P + A ALS++ EA K+ L+ K N
Sbjct: 72 AICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSN 119
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} Length = 126 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 3e-11
Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 235 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 294
+ +G F + D +A++ YT+ I Y+ R+ +A+ D +A
Sbjct: 8 RLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIE 66
Query: 295 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 340
P + A +A A A+ A L T +A+ N+ + +
Sbjct: 67 KDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAR 112
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 62.3 bits (151), Expect = 4e-11
Identities = 30/164 (18%), Positives = 52/164 (31%), Gaps = 32/164 (19%)
Query: 6 RLRVVLHLAQALEYCTSKGRALYH-DL---NAYRILFDEDGNPRLSTFGLMKNSRDGKSY 61
RL++ L + + L G L H L + I+ D+ G L+ F +
Sbjct: 208 RLQLTLQVIRLLASLHHYG--LVHTYLRPVD---IVLDQRGGVFLTGFEHLVRDGARVVS 262
Query: 62 STNLAFTPPEYL-----------RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR 110
S + F PPE R +T ++ G ++ + P I
Sbjct: 263 SVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCAD--LP------IT 314
Query: 111 DRNLQMLTDSCLEGQFTDDDGTELVR-LASRCLQYEPRERPNPK 153
++ + + VR L L+Y +R P
Sbjct: 315 KDAALGGSEWIFRS---CKNIPQPVRALLEGFLRYPKEDRLLPL 355
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 5e-11
Identities = 31/205 (15%), Positives = 61/205 (29%), Gaps = 37/205 (18%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALY--------H-DLNAYRILFDEDGNPRLSTFGL 51
+ W + +A+ L Y L H D+ + +L + ++ FGL
Sbjct: 118 VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL 177
Query: 52 MKNSRDGKSYSTNLAFT------PPEYLRTGRVTPESV-----IYSFGTLLLDLLSGK-- 98
GKS PE L +Y+ G +L +L S
Sbjct: 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTA 237
Query: 99 --------------HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT-ELVRLASRCLQ 143
I +L+ +++ + L + G L C
Sbjct: 238 ADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWD 297
Query: 144 YEPRERPNPKSLVTALSPLQKETEV 168
++ R + + ++ +Q+ T +
Sbjct: 298 HDAEARLSAGCVGERITQMQRLTNI 322
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 61.6 bits (149), Expect = 8e-11
Identities = 35/222 (15%), Positives = 63/222 (28%), Gaps = 45/222 (20%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYH-DL---NAYRILFDEDGNPRLSTFGLMKNSR 56
+ RL++ L + + L G L H L + I+ D+ G L+ F +
Sbjct: 208 LVHHARLQLTLQVIRLLASLHHYG--LVHTYLRPVD---IVLDQRGGVFLTGFEHLVRDG 262
Query: 57 DGKSYSTNLAFTPPEYL----------RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL 106
F PPE +T ++ G + + P+
Sbjct: 263 ASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD--LPNTDD 320
Query: 107 DLIRDRNLQMLTDSCLEGQFTDDDGT--ELVRLASRCLQYEPRERPNP------------ 152
+ E F + L L+Y +R P
Sbjct: 321 AALGG----------SEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL 370
Query: 153 KSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSR 194
++ ++A PL + P+ P S + EA +
Sbjct: 371 RTELSAALPLYQTDGEPTREGGAPPSGTSQPDEAGAAEAVTA 412
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 9e-11
Identities = 31/178 (17%), Positives = 71/178 (39%), Gaps = 25/178 (14%)
Query: 1 MKWAMRLRVVLHLAQALEYC-TSKGRALYH-DLNAYRILFDEDGN-PRLSTFGLMKNSRD 57
A + L +Q + Y + + +AL H DL +L G ++ FG + D
Sbjct: 99 YTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGT---ACD 155
Query: 58 GKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGK------HIPPSHALD 107
+++ TN + PE + + ++S+G +L ++++ + P +
Sbjct: 156 IQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW 215
Query: 108 LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 165
+ + L + + + L +RC +P +RP+ + +V ++ L +
Sbjct: 216 AVHNGTRPPLIKNLPK---------PIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY 264
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Length = 477 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 2e-10
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 228 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALN 287
++ K + + F+ KD ++AI+ Y+Q I+ + Y RSL YL ++ AL
Sbjct: 3 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALG 61
Query: 288 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALK 324
DA +A + + Y +AA+ A+G A +
Sbjct: 62 DATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYE 98
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} Length = 111 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 5e-10
Identities = 16/99 (16%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Query: 228 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALN 287
M + K++G+ F+Q ++A+ CY Q I A +P Y+ +++ + A+
Sbjct: 1 MSQFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQ 59
Query: 288 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEG 326
Q + +++ + + A +++
Sbjct: 60 MCQQGLRYTSTAEHV-AIRSKLQYRLELAQGAVGSVQIP 97
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 2e-09
Identities = 39/181 (21%), Positives = 73/181 (40%), Gaps = 31/181 (17%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLST-----FGLMKN 54
+KW+++LR++L +A +EY ++ + H DL + I FGL
Sbjct: 119 IKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL--- 175
Query: 55 SRDGKSYSTNLAFTP----PEYL--RTGRVTPESVIYSFGTLLLDLLSGK----HIPPSH 104
S+ + L PE + T ++ YSF +L +L+G+
Sbjct: 176 SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK 235
Query: 105 A--LDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 161
+++IR+ L+ + + C L + C +P++RP+ +V LS
Sbjct: 236 IKFINMIREEGLRPTIPEDCPP---------RLRNVIELCWSGDPKKRPHFSYIVKELSE 286
Query: 162 L 162
L
Sbjct: 287 L 287
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 4e-09
Identities = 34/194 (17%), Positives = 64/194 (32%), Gaps = 34/194 (17%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGL--MKNSRD 57
+ ++ + + + Y +KG + H DL + + +D +G ++ FGL +
Sbjct: 127 LDVNKTRQIAQEIVKGMGYLHAKG--ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQ 183
Query: 58 GKSYSTNLAFTP-------PEYLRTGRVTPESV---------IYSFGTLLLDLLSGK--- 98
L PE +R E +++ GT+ +L + +
Sbjct: 184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF 243
Query: 99 -HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157
P + + L+ G E+ + C +E ERP L+
Sbjct: 244 KTQPAEAIIWQMGTGMKPNLSQI--------GMGKEISDILLFCWAFEQEERPTFTKLMD 295
Query: 158 ALSPLQKETEVPSH 171
L L K SH
Sbjct: 296 MLEKLPKRNRRLSH 309
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 4e-09
Identities = 34/192 (17%), Positives = 63/192 (32%), Gaps = 36/192 (18%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGL-------- 51
W+ R+ +A + Y S + H DLN++ L E+ N ++ FGL
Sbjct: 105 YPWSQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162
Query: 52 ------MKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 101
+ + + P PE + + ++SFG +L +++ +
Sbjct: 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNAD 222
Query: 102 P-----SHALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155
P + L L +C + RC +P +RP+ L
Sbjct: 223 PDYLPRTMDFGLNVRGFLDRYCPPNCPP---------SFFPITVRCCDLDPEKRPSFVKL 273
Query: 156 VTALSPLQKETE 167
L L+
Sbjct: 274 EHWLETLRMHLA 285
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 6e-09
Identities = 32/179 (17%), Positives = 68/179 (37%), Gaps = 32/179 (17%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRA--LYHDLNAYRILFDEDGNPRLST--------FG 50
+ + + + +A+ + Y + ++ DL + IL + + FG
Sbjct: 102 IPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161
Query: 51 LMKNSRD-GKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIP 101
L +R+ ++ + A PE +R + S ++S+G LL +LL+G+ I
Sbjct: 162 L---AREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID 218
Query: 102 PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 159
+ L + + +C E +L C +P RP+ +++ L
Sbjct: 219 GLAVAYGVAMNKLALPIPSTCPE---------PFAKLMEDCWNPDPHSRPSFTNILDQL 268
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 7e-09
Identities = 31/156 (19%), Positives = 54/156 (34%), Gaps = 20/156 (12%)
Query: 7 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN-SRDGKSYSTNL 65
+ AL + S+G ++ D+ I G +L FGL+ G
Sbjct: 160 WGYLRDTLLALAHLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEV--- 215
Query: 66 AF--TP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 119
P PE L+ + ++S G +L++ P Q L
Sbjct: 216 -QEGDPRYMAPELLQGSY-GTAADVFSLGLTILEVACNME-LPHGG------EGWQQLRQ 266
Query: 120 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155
L +FT +EL + L+ +P+ R ++L
Sbjct: 267 GYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEAL 302
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 3e-08
Identities = 21/105 (20%), Positives = 42/105 (40%), Gaps = 6/105 (5%)
Query: 235 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP--TVYARRSLCYLMSDMPQDALNDAMQA 292
K KG+ FR K DAI+ Y ++ + Y+ S CY+ + + + +A
Sbjct: 10 KDKGNQFFRNKKYDDAIKYYNWALE----LKEDPVFYSNLSACYVSVGDLKKVVEMSTKA 65
Query: 293 QIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337
+ P + +A+A +G +A L + +++
Sbjct: 66 LELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDASI 110
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 3e-08
Identities = 38/146 (26%), Positives = 61/146 (41%), Gaps = 19/146 (13%)
Query: 13 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST---NLAFT 68
+ A++YC K + H DL A +L D D N +++ FG G +
Sbjct: 123 IVSAVQYCHQKR--IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYA 180
Query: 69 PPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 126
PE + G+ PE ++S G +L L+SG +P +NL+ L + L G++
Sbjct: 181 APELFQ-GKKYDGPEVDVWSLGVILYTLVSG-SLP-------FDGQNLKELRERVLRGKY 231
Query: 127 TDDDG--TELVRLASRCLQYEPRERP 150
T+ L R L P +R
Sbjct: 232 RIPFYMSTDCENLLKRFLVLNPIKRG 257
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 7e-08
Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 19/160 (11%)
Query: 7 LRVVLHLAQALEYCTSKGRALYH----DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS 62
LRV+ L AL+ C + + DL + D N +L FGL + S++
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA 173
Query: 63 TNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 118
TP PE + +S I+S G LL +L + PP A + + L
Sbjct: 174 KTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM--PPFTA------FSQKELA 225
Query: 119 DSCLEGQFT---DDDGTELVRLASRCLQYEPRERPNPKSL 155
EG+F EL + +R L + RP+ + +
Sbjct: 226 GKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEI 265
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} Length = 127 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 9e-08
Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
Query: 235 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 294
K G+ A++QKD + A Y + I+ + T Y ++ Y + + +A
Sbjct: 12 KDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFAECVQFCEKAVE 70
Query: 295 ISPIWHIASYLQAAALSAMGMENEAQVALKE 325
+ L A A+S G + Q L
Sbjct: 71 VGRETRADYKLIAKAMSRAGNAFQKQNDLSL 101
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 1e-07
Identities = 38/188 (20%), Positives = 68/188 (36%), Gaps = 33/188 (17%)
Query: 13 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF---- 67
+ +AL Y S+G + H DL I DE N ++ FGL KN +
Sbjct: 125 ILEALSYIHSQG--IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 68 ----------TP----PEYLR-TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR 112
T E L TG + +YS G + +++ P S ++ +
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY----PFSTGMERVNIL 238
Query: 113 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS----PLQKETEV 168
F D+ ++ + ++P +RP ++L L+ P++ + EV
Sbjct: 239 KKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTL---LNSGWLPVKHQDEV 295
Query: 169 PSHVLMGI 176
L +
Sbjct: 296 IKEALKSL 303
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 1e-07
Identities = 33/156 (21%), Positives = 63/156 (40%), Gaps = 16/156 (10%)
Query: 7 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 66
L + + AL++ + + L+ D+ + I +DG +L FG+ + +
Sbjct: 128 LDWFVQICLALKHVHDR-KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACI 186
Query: 67 FTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 122
TP PE +S I++ G +L +L + K A +++ L +
Sbjct: 187 GTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK--HAFEA------GSMKNLVLKII 238
Query: 123 EGQFTDDDGT---ELVRLASRCLQYEPRERPNPKSL 155
G F +L L S+ + PR+RP+ S+
Sbjct: 239 SGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSI 274
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 1e-07
Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 1/99 (1%)
Query: 227 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDAL 286
+ E + + AF D AI + ++ + R+ C++ P+ A+
Sbjct: 139 KSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVW-DAELRELRAECFIKEGEPRKAI 197
Query: 287 NDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 325
+D A + A Y + +G + ++E
Sbjct: 198 SDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRE 236
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 5e-06
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 1/91 (1%)
Query: 235 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 294
+ G L DA+ + +D + Y RR+ +L + AL D +
Sbjct: 30 LELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIQ 88
Query: 295 ISPIWHIASYLQAAALSAMGMENEAQVALKE 325
+ + A + L G +EA+ K+
Sbjct: 89 LKMDFTAARLQRGHLLLKQGKLDEAEDDFKK 119
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 2e-04
Identities = 16/102 (15%), Positives = 33/102 (32%), Gaps = 3/102 (2%)
Query: 227 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFID---AGTMVSPTVYARRSLCYLMSDMPQ 283
Q+++ + + R DA Y + + + R C+ + P
Sbjct: 253 QVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPV 312
Query: 284 DALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 325
+A+ + + P A +A A M +EA +
Sbjct: 313 EAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYET 354
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 2e-07
Identities = 32/164 (19%), Positives = 55/164 (33%), Gaps = 30/164 (18%)
Query: 8 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPR--LSTFGLMKNSRDGKSY 61
++ L + S + H DL + IL + G + +S FGL K G+
Sbjct: 122 TLLQQTTSGLAHLHSLN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS 179
Query: 62 STNLAF---TP----PEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHAL 106
+ + T PE L T I+S G + ++S P A
Sbjct: 180 FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN 239
Query: 107 DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150
L+ +L L + L + + +P++RP
Sbjct: 240 ILLGACSLDCLHPE-------KHEDVIARELIEKMIAMDPQKRP 276
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A Length = 131 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 2e-07
Identities = 14/91 (15%), Positives = 32/91 (35%), Gaps = 1/91 (1%)
Query: 235 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 294
K+ G+ A+++KD A++ Y + + + T ++ Y +A
Sbjct: 8 KELGNDAYKKKDFDTALKHYDKAKELDP-TNMTYITNQAAVYFEKGDYNKCRELCEKAIE 66
Query: 295 ISPIWHIASYLQAAALSAMGMENEAQVALKE 325
+ A A + +G + K+
Sbjct: 67 VGRENREDYRQIAKAYARIGNSYFKEEKYKD 97
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 2e-07
Identities = 28/142 (19%), Positives = 50/142 (35%), Gaps = 15/142 (10%)
Query: 13 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--NLAFTP 69
LA AL YC + + H D+ +L G +++ FG ++ + + L + P
Sbjct: 123 LADALHYCHERK--VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLP 180
Query: 70 PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT-- 127
PE + + ++ G L + L G PP + +
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGM--PPFD------SPSHTETHRRIVNVDLKFP 232
Query: 128 DDDGTELVRLASRCLQYEPRER 149
L S+ L+Y P +R
Sbjct: 233 PFLSDGSKDLISKLLRYHPPQR 254
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 4e-07
Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 1/99 (1%)
Query: 227 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDAL 286
+ E + + AF D AI + ++ + R+ C++ P+ A+
Sbjct: 116 KADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVW-DAELRELRAECFIKEGEPRKAI 174
Query: 287 NDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 325
+D A + A Y + +G + ++E
Sbjct: 175 SDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEVRE 213
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 5e-05
Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 7/94 (7%)
Query: 235 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT---VYARRSLCYLMSDMPQDALNDAMQ 291
+ G L DA+ + +D P Y RR+ +L + AL D +
Sbjct: 7 LELGKKLLAAGQLADALSQFHAAVDG----DPDNYIAYYRRATVFLAMGKSKAALPDLTK 62
Query: 292 AQIISPIWHIASYLQAAALSAMGMENEAQVALKE 325
+ + A + L G +EA+ K+
Sbjct: 63 VIALKMDFTAARLQRGHLLLKQGKLDEAEDDFKK 96
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 7e-05
Identities = 16/96 (16%), Positives = 32/96 (33%), Gaps = 3/96 (3%)
Query: 227 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFID---AGTMVSPTVYARRSLCYLMSDMPQ 283
Q+++ + + R DA Y + + + R C+ + P
Sbjct: 230 QVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPV 289
Query: 284 DALNDAMQAQIISPIWHIASYLQAAALSAMGMENEA 319
+A+ + + P A +A A M +EA
Sbjct: 290 EAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEA 325
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 49.1 bits (118), Expect = 6e-07
Identities = 36/142 (25%), Positives = 55/142 (38%), Gaps = 15/142 (10%)
Query: 13 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--NLAFTP 69
LA AL YC SK + H D+ +L G +++ FG ++ + L + P
Sbjct: 118 LANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLP 175
Query: 70 PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT-- 127
PE + + ++S G L + L GK PP Q +FT
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK--PP------FEANTYQETYKRISRVEFTFP 227
Query: 128 DDDGTELVRLASRCLQYEPRER 149
D L SR L++ P +R
Sbjct: 228 DFVTEGARDLISRLLKHNPSQR 249
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 6e-07
Identities = 41/188 (21%), Positives = 70/188 (37%), Gaps = 34/188 (18%)
Query: 7 LRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 65
L + L +A+A+E+ SKG L H DL I F D ++ FGL+ + T L
Sbjct: 121 LHIFLQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 178
Query: 66 AFTPPEYLRTGRV-TP---------------ESVIYSFGTLLLDLLSGKHIPPSHALDLI 109
P TG+V T + I+S G +L +LL P S ++ +
Sbjct: 179 TPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL----YPFSTQMERV 234
Query: 110 RDRNLQMLTDSCLEGQFTDDDGT---ELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 166
R +F + L P ERP +++ + + ++
Sbjct: 235 R------TLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE--NAVFEDL 286
Query: 167 EVPSHVLM 174
+ P ++
Sbjct: 287 DFPGKTVL 294
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 49.5 bits (118), Expect = 6e-07
Identities = 32/225 (14%), Positives = 57/225 (25%), Gaps = 47/225 (20%)
Query: 1 MKWAMRLRVVLHLAQALEY-------CTSKGRALYH-DLNAYRILFDEDGNPRLSTFGL- 51
W R+ + + L Y A+ H DLN+ +L DG +S FGL
Sbjct: 108 SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167
Query: 52 -------MKNSRDGKSYSTNLAFTP----PEYLR-------TGRVTPESVIYSFGTLLLD 93
+ + + + + T PE L + +Y+ G + +
Sbjct: 168 MRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWE 227
Query: 94 LLSGKHI-----------PPSHALDLIRDRNLQMLTDSCLEGQ-------FTDDDGT--E 133
+ M E Q + ++
Sbjct: 228 IFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRS 287
Query: 134 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPH 178
L C + R + ++ L E V H
Sbjct: 288 LKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKSVSPTAHH 332
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.9 bits (118), Expect = 8e-07
Identities = 24/167 (14%), Positives = 46/167 (27%), Gaps = 33/167 (19%)
Query: 2 KWAMRLRVVLHLAQALEYCTSKGRALYHD--LNAYRIL--FDEDGNPRLSTFGL------ 51
K + + + H ++ Y I FD D
Sbjct: 419 KQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIG 478
Query: 52 --MKNSRDGKSYS------TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL-LSGKHIPP 102
+KN + + + F + T + S L L +I
Sbjct: 479 HHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDS--TAWNASGSILNTLQQLKFYKPYICD 536
Query: 103 SHALD--LIRD--RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 145
+ L+ L + ++ + ++TD L+R+A L E
Sbjct: 537 NDPKYERLVNAILDFLPKIEENLICSKYTD-----LLRIA---LMAE 575
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 2e-06
Identities = 37/168 (22%), Positives = 59/168 (35%), Gaps = 30/168 (17%)
Query: 7 LRVVLHLAQALEYCTSKGRALYHDL---NAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 63
L + + +A+A+E+ SKG ++ DL N I F D ++ FGL+ + T
Sbjct: 167 LHIFIQIAEAVEFLHSKG-LMHRDLKPSN---IFFTMDDVVKVGDFGLVTAMDQDEEEQT 222
Query: 64 NLAFTPPEYLRTGRV-TP---------------ESVIYSFGTLLLDLLSGKHIPPSHALD 107
L P TG+V T + I+S G +L +LL
Sbjct: 223 VLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRI 282
Query: 108 LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155
+ RNL+ + + L P ERP +
Sbjct: 283 ITDVRNLKFPLLF-------TQKYPQEHMMVQDMLSPSPTERPEATDI 323
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 3e-06
Identities = 36/181 (19%), Positives = 68/181 (37%), Gaps = 25/181 (13%)
Query: 7 LRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 65
+ + L ALE+ S+ + H D+ + G +L GL + + + +L
Sbjct: 139 WKYFVQLCSALEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL 196
Query: 66 AFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 121
TP PE + +S I+S G LL ++ + + P + NL L
Sbjct: 197 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ--SPFYG----DKMNLYSLCKKI 250
Query: 122 LEGQF----TDDDGTELVRLASRCLQYEPRERPN-------PKSLVTALSPLQKETEVPS 170
+ + +D EL +L + C+ +P +RP+ K + + +
Sbjct: 251 EQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSLEHHH-HH 309
Query: 171 H 171
H
Sbjct: 310 H 310
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 3e-06
Identities = 35/146 (23%), Positives = 57/146 (39%), Gaps = 25/146 (17%)
Query: 13 LAQALEYCTSKGRALYH-DLNAYRILFD-EDGNPRLSTFGLMKNSRDGKSYST---NLAF 67
+ A+++C S+G + H D+ IL D G +L FG D Y+ +
Sbjct: 148 VVAAIQHCHSRG--VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP-YTDFDGTRVY 204
Query: 68 TPPEYLRTGRVT-PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 126
+PPE++ + + ++S G LL D++ G P I LE +
Sbjct: 205 SPPEWISRHQYHALPATVWSLGILLYDMVCGDI--PFERDQEI------------LEAEL 250
Query: 127 TDDDG--TELVRLASRCLQYEPRERP 150
+ L RCL +P RP
Sbjct: 251 HFPAHVSPDCCALIRRCLAPKPSSRP 276
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 4e-06
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 235 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 294
K +G+ F K+ +AI+ Y I+ P Y+ S CY+ + + + +A
Sbjct: 29 KNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALE 87
Query: 295 ISPIWHIASYLQAAALSAMGMENEAQVALK 324
I P A +A+A ++G +A L
Sbjct: 88 IKPDHSKALLRRASANESLGNFTDAMFDLS 117
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 5e-06
Identities = 36/148 (24%), Positives = 58/148 (39%), Gaps = 21/148 (14%)
Query: 13 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGL---MKNSRDGKSYSTNL--- 65
L LEY S+G + H D+ +L G ++S G+ + + T+
Sbjct: 118 LIDGLEYLHSQG--IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSP 175
Query: 66 AFTPPEYLRTGRV--TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE 123
AF PPE + I+S G L ++ +G P N+ L ++ +
Sbjct: 176 AFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG-LYP-------FEGDNIYKLFENIGK 227
Query: 124 GQFT--DDDGTELVRLASRCLQYEPRER 149
G + D G L L L+YEP +R
Sbjct: 228 GSYAIPGDCGPPLSDLLKGMLEYEPAKR 255
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 5e-06
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 25/146 (17%)
Query: 13 LAQALEYCTSKGRALYH-DLNAYRILFDED-GNPRLSTFGLMKNSRDGKSYST---NLAF 67
+ +A+ +C + G + H D+ IL D + G +L FG +D Y+ +
Sbjct: 158 VLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVY 214
Query: 68 TPPEYLRTGRVT-PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 126
+PPE++R R + ++S G LL D++ G P + I + GQ
Sbjct: 215 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI--PFEHDEEI------------IRGQV 260
Query: 127 TDDDG--TELVRLASRCLQYEPRERP 150
+E L CL P +RP
Sbjct: 261 FFRQRVSSECQHLIRWCLALRPSDRP 286
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 5e-06
Identities = 36/160 (22%), Positives = 58/160 (36%), Gaps = 32/160 (20%)
Query: 8 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 63
R++ + + Y + H DL +L +D N R+ FGL + K
Sbjct: 130 RIIRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 187
Query: 64 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 119
T PE L G + ++S G +L LLSG PP + N +
Sbjct: 188 -KIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGC--PPFN------GANEYDILK 237
Query: 120 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 150
+G++T + +L+R + L Y P R
Sbjct: 238 KVEKGKYTFELPQWKKVSESAKDLIR---KMLTYVPSMRI 274
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 6e-06
Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 17/151 (11%)
Query: 13 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTN---LAF 67
+ +Y + H DL + +ED ++ FGL K DG+ +
Sbjct: 124 IVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNY 181
Query: 68 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 127
PE L + E ++S G ++ LL GK PP L+ + +++
Sbjct: 182 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK--PPFE------TSCLKETYLRIKKNEYS 233
Query: 128 --DDDGTELVRLASRCLQYEPRERPNPKSLV 156
L + LQ +P RP L+
Sbjct: 234 IPKHINPVAASLIQKMLQTDPTARPTINELL 264
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 Length = 198 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 6e-06
Identities = 22/141 (15%), Positives = 53/141 (37%), Gaps = 18/141 (12%)
Query: 205 EKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQ-------- 256
E + ++ + + + + +++Q + K++G+ F++ ++ +AI Y +
Sbjct: 15 ENLYFQGAKKSIYDYTDE---EKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHT 71
Query: 257 -------FIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 309
+D + + + CY + A++ A + I A Y A
Sbjct: 72 EEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVA 131
Query: 310 LSAMGMENEAQVALKEGTTLE 330
G EA+ L + +L
Sbjct: 132 NMYFGFLEEAKENLYKAASLN 152
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 7e-06
Identities = 30/160 (18%), Positives = 60/160 (37%), Gaps = 32/160 (20%)
Query: 8 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 63
++ + + Y + H DL +L ++D ++ FGL + K
Sbjct: 140 VIIKQVLSGVTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKE 197
Query: 64 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 119
T PE LR + + ++S G +L LL+G PP + Q +
Sbjct: 198 -RLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGY--PP------FGGQTDQEILR 247
Query: 120 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 150
+G++T + +L++ + LQ++ + R
Sbjct: 248 KVEKGKYTFDSPEWKNVSEGAKDLIK---QMLQFDSQRRI 284
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 8e-06
Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 32/160 (20%)
Query: 8 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 63
++ + + Y + H D+ IL + N ++ FGL
Sbjct: 150 NIMKQILSGICYLHKHN--IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRD 207
Query: 64 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 119
T PE L+ + + ++S G ++ LL G PP +N Q +
Sbjct: 208 -RLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGY--PPFGG------QNDQDIIK 257
Query: 120 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 150
+G++ D+ EL++ L Y+ +R
Sbjct: 258 KVEKGKYYFDFNDWKNISDEAKELIK---LMLTYDYNKRC 294
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 1e-05
Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 17/151 (11%)
Query: 13 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYST---NLAF 67
+ +Y + H DL + +ED ++ FGL K DG+ +
Sbjct: 150 IVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNY 207
Query: 68 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 127
PE L + E ++S G ++ LL GK PP L+ + +++
Sbjct: 208 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK--PPFE------TSCLKETYLRIKKNEYS 259
Query: 128 --DDDGTELVRLASRCLQYEPRERPNPKSLV 156
L + LQ +P RP L+
Sbjct: 260 IPKHINPVAASLIQKMLQTDPTARPTINELL 290
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 1e-05
Identities = 35/165 (21%), Positives = 60/165 (36%), Gaps = 40/165 (24%)
Query: 8 RVVLHLAQALEYCTSKGRALYH-DL---NAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 63
+++ L + + + H DL N IL D+D N +L+ FG G+
Sbjct: 128 KIMRALLEVICALHKLN--IVHRDLKPEN---ILLDDDMNIKLTDFGFSCQLDPGEKLRE 182
Query: 64 NLAFTP----PEYLRTGRV------TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 113
+ TP PE + E ++S G ++ LL+G PP R
Sbjct: 183 -VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG--SPPFW------HRK 233
Query: 114 LQMLTDSCLEGQFT---------DDDGTELVRLASRCLQYEPRER 149
++ + G + D +LV R L +P++R
Sbjct: 234 QMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVS---RFLVVQPQKR 275
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 1e-05
Identities = 24/156 (15%), Positives = 52/156 (33%), Gaps = 16/156 (10%)
Query: 8 RVVLHLAQALEYCTSKGRALYH-DLNAYRILFD-EDGNPRLSTFGLMKNSRDGKSYST-- 63
+ + L++ ++ + H DL I G+ ++ GL R + +
Sbjct: 133 SWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIG 192
Query: 64 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH----IPPSHALDLIRDRNLQMLTD 119
F PE +Y+FG +L++ + ++ + + +T
Sbjct: 193 TPEFMAPEMYEEK-YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRR-------VTS 244
Query: 120 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155
F E+ + C++ ER + K L
Sbjct: 245 GVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDL 280
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 1e-05
Identities = 35/187 (18%), Positives = 61/187 (32%), Gaps = 36/187 (19%)
Query: 7 LRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 65
L++ +A+++ + + H DL +L G +L FG YS +
Sbjct: 139 LKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSA 198
Query: 66 AF------------TP----PEYLRTGR---VTPESVIYSFGTLLLDLLSGKHIPPSHAL 106
TP PE + + + I++ G +L L +H P
Sbjct: 199 QRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQH--PFEDG 256
Query: 107 DLIRDRNLQMLTDSCLEGQFT----DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 162
+R + G+++ D T L LQ P ER + +V L +
Sbjct: 257 AKLR----------IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEI 306
Query: 163 QKETEVP 169
V
Sbjct: 307 AAARNVN 313
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 1e-05
Identities = 38/167 (22%), Positives = 64/167 (38%), Gaps = 22/167 (13%)
Query: 13 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA----- 66
L+ AL Y SK H D+ A +L + +L FGL + D Y +
Sbjct: 500 LSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 557
Query: 67 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSC 121
+ PE + R T S ++ FG + ++L P + + I + + +C
Sbjct: 558 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 617
Query: 122 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 168
L L ++C Y+P RP L LS + +E ++
Sbjct: 618 PP---------TLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKL 655
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 1e-05
Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 18/154 (11%)
Query: 7 LRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 65
L + + + ++Y SK L + DL I + ++ FGL+ + ++ + +
Sbjct: 125 LELFEQITKGVDYIHSKK--LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSK 182
Query: 66 AFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 121
T PE + + E +Y+ G +L +LL D
Sbjct: 183 G-TLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCD-TAFETSKFFTD---------L 231
Query: 122 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155
+G +D + L + L +P +RPN +
Sbjct: 232 RDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEI 265
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 2e-05
Identities = 41/160 (25%), Positives = 56/160 (35%), Gaps = 32/160 (20%)
Query: 8 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 63
R++ + A+ YC + H DL LF D +L FGL + GK T
Sbjct: 110 RIMKDVLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT 167
Query: 64 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 119
TP P+ L G PE +S G ++ LL G PP +
Sbjct: 168 -KVGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGY--PPFS------APTDSEVML 217
Query: 120 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 150
EG FT L+R R L P++R
Sbjct: 218 KIREGTFTFPEKDWLNVSPQAESLIR---RLLTKSPKQRI 254
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 2e-05
Identities = 46/166 (27%), Positives = 67/166 (40%), Gaps = 24/166 (14%)
Query: 14 AQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA-----F 67
A + Y H DL A IL E+ +++ FGL + D + + A +
Sbjct: 290 ASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 347
Query: 68 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLT-DSC 121
T PE GR T +S ++SFG LL +L + +P LD + +R +M C
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPEC 406
Query: 122 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 167
E L L +C + EP ERP + L L TE
Sbjct: 407 PE---------SLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Length = 258 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 2e-05
Identities = 16/103 (15%), Positives = 36/103 (34%), Gaps = 4/103 (3%)
Query: 235 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 294
K +G+ ++ + +AIE Y + + T R+ + A++ A
Sbjct: 9 KAEGNKFYKARQFDEAIEHYNKAWELHK--DITYLNNRAAAEYEKGEYETAISTLNDAVE 66
Query: 295 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337
+ + + + +G LK+ T+E + S
Sbjct: 67 QGREMRADYKVISKSFARIGNAYHKLGDLKK--TIEYYQKSLT 107
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Length = 258 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 9e-05
Identities = 22/108 (20%), Positives = 36/108 (33%), Gaps = 16/108 (14%)
Query: 237 KGDVAFRQKDLKDAIECYTQFI-----DAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQ 291
+G F + D +A++ YT+ I DA Y+ R+ +A+ D +
Sbjct: 145 EGKEYFTKSDWPNAVKAYTEMIKRAPEDA------RGYSNRAAALAKLMSFPEAIADCNK 198
Query: 292 AQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTL-----EAKKN 334
A P + A +A A A+ A L T
Sbjct: 199 AIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSA 246
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} Length = 162 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 2e-05
Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 17/122 (13%)
Query: 226 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQ---FIDAGTMVSP--------------TV 268
D+++ ++KG+ F QKD K+AI+ Y +D + +
Sbjct: 6 DKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPL 65
Query: 269 YARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTT 328
YA S CYL +A + + A + +A A A +EA+ LK
Sbjct: 66 YANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLR 125
Query: 329 LE 330
Sbjct: 126 NH 127
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 2e-05
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 16/155 (10%)
Query: 9 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 68
V + QAL Y ++G ++ D+ + IL DG +LS FG +L T
Sbjct: 146 VCEAVLQALAYLHAQGV-IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGT 204
Query: 69 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDS 120
P PE + E I+S G ++++++ G+ P A+ +RD L +S
Sbjct: 205 PYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNS 264
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155
+ + L R L +P+ER + L
Sbjct: 265 ---HKVSP----VLRDFLERMLVRDPQERATAQEL 292
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 2e-05
Identities = 41/164 (25%), Positives = 61/164 (37%), Gaps = 34/164 (20%)
Query: 8 RVVLHLAQALEYCTSKGRALYH-DL---NAYRILF-DEDGNP---RLSTFGLMKNSRDGK 59
V+ + + +EY ++G H DL N IL+ DE GNP R+ FG K R
Sbjct: 120 AVLFTITKTVEYLHAQGVV--HRDLKPSN---ILYVDESGNPESIRICDFGFAKQLRAEN 174
Query: 60 SYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 115
+T PE L I+S G LL +L+G P D +
Sbjct: 175 GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG--YTPFANG---PDDTPE 229
Query: 116 MLTDSCLEGQFTDDDGT---------ELVRLASRCLQYEPRERP 150
+ G+F+ G +LV + L +P +R
Sbjct: 230 EILARIGSGKFSLSGGYWNSVSDTAKDLVS---KMLHVDPHQRL 270
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 44.9 bits (106), Expect = 3e-05
Identities = 46/166 (27%), Positives = 67/166 (40%), Gaps = 24/166 (14%)
Query: 14 AQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA-----F 67
A + Y H DL A IL E+ +++ FGL + D + + A +
Sbjct: 373 ASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 430
Query: 68 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLT-DSC 121
T PE GR T +S ++SFG LL +L + +P LD + +R +M C
Sbjct: 431 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPEC 489
Query: 122 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 167
E L L +C + EP ERP + L L TE
Sbjct: 490 PE---------SLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 4e-05
Identities = 31/159 (19%), Positives = 57/159 (35%), Gaps = 31/159 (19%)
Query: 8 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 63
++ + AL Y S+ + H DL ILF ++ FGL + + + +
Sbjct: 128 ELMKQMMNALAYFHSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTN 185
Query: 64 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 119
T PE + VT + I+S G ++ LL+G P +L+ +
Sbjct: 186 AAG-TALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGC--LPFT------GTSLEEVQQ 235
Query: 120 SCLEGQFT--------DDDGTELVRLASRCLQYEPRERP 150
+ +L++ + L +P RP
Sbjct: 236 KATYKEPNYAVECRPLTPQAVDLLK---QMLTKDPERRP 271
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 4e-05
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 25/173 (14%)
Query: 6 RLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN 64
L++V A +EY SK H DL A L E ++S FG+ + DG ++
Sbjct: 215 LLQMVGDAAAGMEYLESKC--CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASG 272
Query: 65 LAF------TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRN 113
T PE L GR + ES ++SFG LL + S P + + ++
Sbjct: 273 GLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV-EKG 331
Query: 114 LQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 165
++ + C + + RL +C YEP +RP+ ++ L ++K
Sbjct: 332 GRLPCPELCPD---------AVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 4e-05
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 19/145 (13%)
Query: 13 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST---NLAFT 68
+ A++YC + H DL +L D N +++ FGL DG+ T + +
Sbjct: 120 ILSAVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYA 177
Query: 69 PPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 126
PE + GR PE I+S G +L LL G +P D ++ L G F
Sbjct: 178 APEVIS-GRLYAGPEVDIWSCGVILYALLCG-TLP-------FDDEHVPTLFKKIRGGVF 228
Query: 127 T--DDDGTELVRLASRCLQYEPRER 149
+ + L LQ +P +R
Sbjct: 229 YIPEYLNRSVATLLMHMLQVDPLKR 253
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* Length = 148 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 4e-05
Identities = 13/111 (11%), Positives = 28/111 (25%), Gaps = 2/111 (1%)
Query: 216 ANELSFQMWTDQMQETLNS-KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSL 274
+ + M + +TL ++ +DA + +
Sbjct: 5 SGGGTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGA 63
Query: 275 CYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 325
C A++ ++ + A L G EA+ L
Sbjct: 64 CRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQXGELAEAESGLFL 114
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 4e-05
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 16/155 (10%)
Query: 9 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 68
V QALE+ S ++ D+ + IL DG+ +L+ FG +S + + T
Sbjct: 121 VCRECLQALEFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGT 179
Query: 69 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDS 120
P PE + P+ I+S G + ++++ G+ + P AL LI L +
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP 239
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155
+ + +RCL+ + +R + K L
Sbjct: 240 ---EKLSA----IFRDFLNRCLEMDVEKRGSAKEL 267
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 5e-05
Identities = 32/206 (15%), Positives = 66/206 (32%), Gaps = 39/206 (18%)
Query: 1 MKWAMRLRVVLHLAQALEY------CTSKGRALYH-DLNAYRILFDEDGNPRLSTFGL-- 51
+ L++ L + T A+ H DL + IL ++G ++ GL
Sbjct: 131 LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 190
Query: 52 --MKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESV-------IYSFGTLLLDLLSGK 98
+ ++ + T PE L + +YSFG +L ++
Sbjct: 191 KFISDTNEVDIPPNTRVGTKRYMPPEVLD-ESLNRNHFQSYIMADMYSFGLILWEVARRC 249
Query: 99 HI--------PPSHALDLIRDRNLQMLTDSCLEGQ--------FTDDDGTELVRLASRCL 142
P H L M C++ +D+ ++ +L + C
Sbjct: 250 VSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECW 309
Query: 143 QYEPRERPNPKSLVTALSPLQKETEV 168
+ P R + L+ + + ++
Sbjct: 310 AHNPASRLTALRVKKTLAKMSESQDI 335
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A Length = 142 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 5e-05
Identities = 12/107 (11%), Positives = 28/107 (26%), Gaps = 2/107 (1%)
Query: 220 SFQMWTDQMQETLNS-KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM 278
+ M ++TL G ++ DA + + + C
Sbjct: 6 TLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQS 64
Query: 279 SDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 325
+ + AL ++ + A +G + A+
Sbjct: 65 LGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFYS 111
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 5e-05
Identities = 35/160 (21%), Positives = 59/160 (36%), Gaps = 32/160 (20%)
Query: 8 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 63
R++ + + Y + H DL IL ++D + ++ FGL +
Sbjct: 125 RIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD 182
Query: 64 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 119
T PE LR G + ++S G +L LLSG PP + +N +
Sbjct: 183 -RIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG--TPPFY------GKNEYDILK 232
Query: 120 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 150
G++ DD +L+R + L + P R
Sbjct: 233 RVETGKYAFDLPQWRTISDDAKDLIR---KMLTFHPSLRI 269
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A Length = 336 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 6e-05
Identities = 19/126 (15%), Positives = 45/126 (35%), Gaps = 15/126 (11%)
Query: 220 SFQMWTDQMQETLNSKK-KGDVAFRQKDLKDAIECYTQ---FIDAGTMVSP--------- 266
S++M +++ E K +G V F++ K A+ Y + +++ + S
Sbjct: 135 SWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQAL 194
Query: 267 --TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALK 324
+ ++C+L A+ +A + + A A+ A+ +
Sbjct: 195 RLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQ 254
Query: 325 EGTTLE 330
+ L
Sbjct: 255 KVLQLY 260
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 6e-05
Identities = 28/145 (19%), Positives = 52/145 (35%), Gaps = 17/145 (11%)
Query: 13 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTN---LAF 67
+ + Y S G + H DL +L + N +++ FGL + + + T +
Sbjct: 121 IITGMLYLHSHG--ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNY 178
Query: 68 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 127
PE ES ++S G + LL G+ PP ++ + + +
Sbjct: 179 ISPEIATRSAHGLESDVWSLGCMFYTLLIGR--PPFD------TDTVKNTLNKVVLADYE 230
Query: 128 --DDDGTELVRLASRCLQYEPRERP 150
E L + L+ P +R
Sbjct: 231 MPSFLSIEAKDLIHQLLRRNPADRL 255
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 7e-05
Identities = 39/165 (23%), Positives = 63/165 (38%), Gaps = 40/165 (24%)
Query: 8 RVVLHLAQALEYCTSKGRALYH-DL---NAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 63
++ L +A+ + + + H DL N IL D++ RLS FG + G+
Sbjct: 204 SIMRSLLEAVSFLHANN--IVHRDLKPEN---ILLDDNMQIRLSDFGFSCHLEPGEKLRE 258
Query: 64 NLAFTP----PEYLRTGRV------TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 113
L TP PE L+ E +++ G +L LL+G PP R
Sbjct: 259 -LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG--SPP------FWHRR 309
Query: 114 LQMLTDSCLEGQFT---------DDDGTELVRLASRCLQYEPRER 149
++ +EGQ+ +L+ R LQ +P R
Sbjct: 310 QILMLRMIMEGQYQFSSPEWDDRSSTVKDLIS---RLLQVDPEAR 351
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 8e-05
Identities = 38/179 (21%), Positives = 68/179 (37%), Gaps = 29/179 (16%)
Query: 7 LRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSY-- 61
+R ++ +A +EY +S+ H DL A + ED ++ FGL SR Y
Sbjct: 140 VRFMVDIACGMEYLSSRN--FIHRDLAARNCMLAEDMTVCVADFGL---SRKIYSGDYYR 194
Query: 62 -STNLAF----TPPEYLRTGRVTPESVIYSFGTLLLDLLS-GK----HIPPSHALDLIRD 111
E L T S +++FG + ++++ G+ I + + +
Sbjct: 195 QGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIG 254
Query: 112 RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPS 170
N C+E E+ L +C +P++RP+ L L + V S
Sbjct: 255 GNRLKQPPECME---------EVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLS 304
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 8e-05
Identities = 37/152 (24%), Positives = 56/152 (36%), Gaps = 18/152 (11%)
Query: 8 RVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN 64
+ + A+ LE+ ++ +Y DL IL DE G+ R+S GL + K ++
Sbjct: 293 DMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-- 349
Query: 65 LAFTP----PEYLRTGRVTPESVIY-SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 119
T PE L+ G S + S G +L LL G P ++ +
Sbjct: 350 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH--SPFRQHK---TKDKHEIDR 404
Query: 120 SCLEGQ--FTDDDGTELVRLASRCLQYEPRER 149
L D EL L LQ + R
Sbjct: 405 MTLTMAVELPDSFSPELRSLLEGLLQRDVNRR 436
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 9e-05
Identities = 36/163 (22%), Positives = 60/163 (36%), Gaps = 38/163 (23%)
Query: 8 RVVLHLAQALEYCTSKGRALYH-DL---NAYRILF---DEDGNPRLSTFGLMKNSRDGKS 60
R++ + + Y + H DL N IL ++D + ++ FGL +
Sbjct: 125 RIIKQVFSGITYMHKHN--IVHRDLKPEN---ILLESKEKDCDIKIIDFGLSTCFQQNTK 179
Query: 61 YSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM 116
T PE LR G + ++S G +L LLSG PP + +N
Sbjct: 180 MKD-RIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGT--PPFYG------KNEYD 229
Query: 117 LTDSCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 150
+ G++ DD +L+R + L + P R
Sbjct: 230 ILKRVETGKYAFDLPQWRTISDDAKDLIR---KMLTFHPSLRI 269
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 9e-05
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 19/142 (13%)
Query: 16 ALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST---NLAFTPPE 71
A+EYC + H DL +L D++ N +++ FGL DG T + + PE
Sbjct: 120 AIEYCHRHK--IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPE 177
Query: 72 YLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT-- 127
+ G+ PE ++S G +L +L G +P D + L +
Sbjct: 178 VIN-GKLYAGPEVDVWSCGIVLYVMLVG-RLP-------FDDEFIPNLFKKVNSCVYVMP 228
Query: 128 DDDGTELVRLASRCLQYEPRER 149
D L R + +P +R
Sbjct: 229 DFLSPGAQSLIRRMIVADPMQR 250
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 9e-05
Identities = 34/159 (21%), Positives = 61/159 (38%), Gaps = 31/159 (19%)
Query: 8 RVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN 64
R V + A+ LE + +Y DL IL D+ G+ R+S GL + +G++
Sbjct: 287 RAVFYAAEICCGLEDLHRER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG- 344
Query: 65 LAF--TPPEYLRTGRVTPESVIY----------SFGTLLLDLLSGKHIPPSHALDLIRDR 112
T Y+ PE V + G LL ++++G+ P +
Sbjct: 345 --RVGT-VGYM-----APEVVKNERYTFSPDWWALGCLLYEMIAGQ--SPFQQRK--KKI 392
Query: 113 NLQMLTDSCLEGQ--FTDDDGTELVRLASRCLQYEPRER 149
+ + E +++ + L S+ L +P ER
Sbjct: 393 KREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAER 431
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 1e-04
Identities = 30/146 (20%), Positives = 56/146 (38%), Gaps = 16/146 (10%)
Query: 13 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP--- 69
L AL+Y ++ ++ D+ IL DE G+ ++ F + +T +A T
Sbjct: 124 LVMALDYLQNQR-IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT-MAGTKPYM 181
Query: 70 -PEYLRTGRVTPESVI---YSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG- 124
PE + + S +S G +LL G+ P H + + + +
Sbjct: 182 APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR--RPYHIRS---STSSKEIVHTFETTV 236
Query: 125 -QFTDDDGTELVRLASRCLQYEPRER 149
+ E+V L + L+ P +R
Sbjct: 237 VTYPSAWSQEMVSLLKKLLEPNPDQR 262
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 1e-04
Identities = 36/167 (21%), Positives = 72/167 (43%), Gaps = 24/167 (14%)
Query: 14 AQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA-----F 67
+ A+EY K H +L A L E+ +++ FGL + + A +
Sbjct: 328 SSAMEYLEKKN--FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 385
Query: 68 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLT-DSC 121
T PE L + + +S +++FG LL ++ + P S +L+ +++ +M + C
Sbjct: 386 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL-EKDYRMERPEGC 444
Query: 122 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 168
E ++ L C Q+ P +RP+ + A + +E+ +
Sbjct: 445 PE---------KVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 482
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 1e-04
Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 22/166 (13%)
Query: 13 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA----- 66
L+ AL Y SK H D+ A +L + +L FGL + D Y +
Sbjct: 125 LSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 182
Query: 67 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSC 121
+ PE + R T S ++ FG + ++L P + + I + + +C
Sbjct: 183 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 242
Query: 122 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 167
L L ++C Y+P RP L LS + +E +
Sbjct: 243 PP---------TLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 279
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 1e-04
Identities = 45/231 (19%), Positives = 83/231 (35%), Gaps = 32/231 (13%)
Query: 8 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 63
++ + +A++Y S A H D+ +L+ + +L+ FG K + S +T
Sbjct: 165 EIMKSIGEAIQYLHSINIA--HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 222
Query: 64 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 119
+TP PE L + ++S G ++ LL G PP ++ +
Sbjct: 223 -PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY--PPFYSNH--GLAISPGMKT 277
Query: 120 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERPNPKSLVTALS-P-LQKETEV 168
GQ+ ++ L+R L+ EP +R ++ P + + T+V
Sbjct: 278 RIRMGQYEFPNPEWSEVSEEVKMLIR---NLLKTEPTQRMTITE---FMNHPWIMQSTKV 331
Query: 169 PSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANEL 219
P L + L + E+I K E +N L
Sbjct: 332 PQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIKIKKIEDASNPL 382
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 1e-04
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 32/149 (21%)
Query: 16 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAF--TPPEY 72
AL+Y S+ +Y DL ++ D+DG+ +++ FGL K +DG + T F T PEY
Sbjct: 260 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT---FCGT-PEY 315
Query: 73 LRTGRVTPESVIY----------SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 122
L PE + G ++ +++ G+ P +++ + L + L
Sbjct: 316 L-----APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LP------FYNQDHEKLFELIL 362
Query: 123 EG--QFTDDDGTELVRLASRCLQYEPRER 149
+F G E L S L+ +P++R
Sbjct: 363 MEEIRFPRTLGPEAKSLLSGLLKKDPKQR 391
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 2e-04
Identities = 38/163 (23%), Positives = 64/163 (39%), Gaps = 26/163 (15%)
Query: 14 AQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF----T 68
+A+EY H DL A +L ED ++S FGL +++ S T
Sbjct: 299 CEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGL---TKEASSTQDTGKLPVKWT 353
Query: 69 PPEYLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLT-DSCL 122
PE LR + + +S ++SFG LL ++ S G+ IP + + ++ +M D C
Sbjct: 354 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-EKGYKMDAPDGCP 412
Query: 123 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 165
+ + C + RP L L ++
Sbjct: 413 P---------AVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 44/173 (25%), Positives = 65/173 (37%), Gaps = 38/173 (21%)
Query: 7 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 66
LR VL + LEY G+ ++ D+ A IL EDG+ +++ FG S LA
Sbjct: 127 LREVL---EGLEYLHKNGQ-IHRDVKAGNILLGEDGSVQIADFG----------VSAFLA 172
Query: 67 FTPPEYLRTGRVT---------PESV-----------IYSFGTLLLDLLSGK----HIPP 102
R T PE + I+SFG ++L +G PP
Sbjct: 173 TGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPP 232
Query: 103 SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155
L L + L + + G ++ S CLQ +P +RP L
Sbjct: 233 MKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 285
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A Length = 151 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 2e-04
Identities = 10/140 (7%), Positives = 39/140 (27%), Gaps = 4/140 (2%)
Query: 202 EILEKISYKDDEGVANELSFQMWTDQMQETLNS-KKKGDVAFRQKDLKDAIECYTQFIDA 260
E IS + + + + + + ++ + + +++A +
Sbjct: 6 TENESISTAVIDAINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIY 65
Query: 261 GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQ 320
+ + Y + + Q A + A + + + + +A+
Sbjct: 66 DFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAK 124
Query: 321 VALKEGTTLEAKKNSTAGQK 340
+ ++ + K
Sbjct: 125 ECFEL--VIQHSNDEKLKIK 142
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 2e-04
Identities = 33/191 (17%), Positives = 65/191 (34%), Gaps = 34/191 (17%)
Query: 7 LRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 65
L ++L + + LE +KG H DL IL ++G P L G M + S
Sbjct: 137 LWLLLGICRGLEAIHAKG--YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQA 194
Query: 66 AFTPPEYLRTG----------------RVTPESVIYSFGTLLLDLLSGKH-----IPPSH 104
+ + + ++S G +L ++ G+
Sbjct: 195 LTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD 254
Query: 105 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 164
++ L L + + L +L + + +P +RP+ L++ L LQ
Sbjct: 255 SVALAVQNQLSIPQSPRH--------SSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306
Query: 165 ET--EVPSHVL 173
+ + +L
Sbjct: 307 PAPGQHTTQIL 317
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 2e-04
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 14/98 (14%)
Query: 13 LAQALEYCTSKGRALYH-DL---NAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--NLA 66
+ + Y ++ + + H D+ N IL D++G +LS FG + D K +
Sbjct: 160 VLNSFSYIHNE-KNICHRDVKPSN---ILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYE 215
Query: 67 FTPPEYL--RTGRVTPESVIYSFGTLLLDLLSGKHIPP 102
F PPE+ + + I+S G L + P
Sbjct: 216 FMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNV--VP 251
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 3e-04
Identities = 31/149 (20%), Positives = 52/149 (34%), Gaps = 22/149 (14%)
Query: 13 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN----LAF 67
L + +EY + + H D+ +L EDG+ +++ FG+ + + +N AF
Sbjct: 146 LIKGIEYLHYQK--IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAF 203
Query: 68 TPPEYLRTGRVT---PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 124
PE L R +++ G L + G P D + L
Sbjct: 204 MAPESLSETRKIFSGKALDVWAMGVTLYCFVFG-QCP-------FMDERIMCLHSKIKSQ 255
Query: 125 QFT----DDDGTELVRLASRCLQYEPRER 149
D +L L +R L P R
Sbjct: 256 ALEFPDQPDIAEDLKDLITRMLDKNPESR 284
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 3e-04
Identities = 33/157 (21%), Positives = 62/157 (39%), Gaps = 26/157 (16%)
Query: 13 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--YSTNLAFTP 69
+ +A+ G + H DL L DG +L FG+ + + + T
Sbjct: 136 MLEAVHTIHQHG--IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 192
Query: 70 ----PEYLR-----------TGRVTPESVIYSFGTLLLDLLSGKHIPP-SHALDLIRDRN 113
PE ++ +++P+S ++S G +L + GK P ++ I
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQIS--K 248
Query: 114 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150
L + D E +F D +L + CL+ +P++R
Sbjct: 249 LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI 285
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 3e-04
Identities = 39/144 (27%), Positives = 58/144 (40%), Gaps = 23/144 (15%)
Query: 16 ALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST-----NLAFTP 69
++YC + H DL +L D N +++ FGL DG+ T N A
Sbjct: 128 GVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA-- 183
Query: 70 PEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 127
PE + GR PE I+S G +L LL G +P D ++ L +G F
Sbjct: 184 PEVIS-GRLYAGPEVDIWSSGVILYALLCG-TLP-------FDDDHVPTLFKKICDGIFY 234
Query: 128 --DDDGTELVRLASRCLQYEPRER 149
++ L LQ +P +R
Sbjct: 235 TPQYLNPSVISLLKHMLQVDPMKR 258
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 4e-04
Identities = 32/157 (20%), Positives = 61/157 (38%), Gaps = 26/157 (16%)
Query: 13 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--YSTNLAFTP 69
+ +A+ G + H DL L DG +L FG+ + + +
Sbjct: 164 MLEAVHTIHQHG--IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAV 220
Query: 70 ----PEYLR-----------TGRVTPESVIYSFGTLLLDLLSGKHIPP-SHALDLIRDRN 113
PE ++ +++P+S ++S G +L + GK P ++ I
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQIS--K 276
Query: 114 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150
L + D E +F D +L + CL+ +P++R
Sbjct: 277 LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI 313
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 4e-04
Identities = 37/175 (21%), Positives = 70/175 (40%), Gaps = 25/175 (14%)
Query: 7 LRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 65
+ L +A+ ++Y SK H DL A + DE +++ FGL ++ D + YS +
Sbjct: 131 IGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN 188
Query: 66 AF--------TPPEYLRTGRVTPESVIYSFGTLLLDLLS-GK----HIPPSHALDLIRDR 112
E L+T + T +S ++SFG LL +L++ G + +
Sbjct: 189 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 248
Query: 113 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 167
+ + C + L + +C + RP+ LV+ +S +
Sbjct: 249 RRLLQPEYCPD---------PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 4e-04
Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 24/166 (14%)
Query: 14 AQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA-----F 67
A+ + + + H DL A IL +++ FGL + D + + A +
Sbjct: 294 AEGMAFIEQRN--YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW 351
Query: 68 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLT-DSC 121
T PE + G T +S ++SFG LL+++++ IP + + +R +M ++C
Sbjct: 352 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL-ERGYRMPRPENC 410
Query: 122 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 167
E EL + RC + P ERP + + + L TE
Sbjct: 411 PE---------ELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE 447
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 4e-04
Identities = 33/157 (21%), Positives = 62/157 (39%), Gaps = 26/157 (16%)
Query: 13 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF--TP 69
+ +A+ G + H DL L DG +L FG+ + + + T
Sbjct: 117 MLEAVHTIHQHG--IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 173
Query: 70 ----PEYLR-----------TGRVTPESVIYSFGTLLLDLLSGKHIPP-SHALDLIRDRN 113
PE ++ +++P+S ++S G +L + GK P ++ I
Sbjct: 174 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQIS--K 229
Query: 114 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150
L + D E +F D +L + CL+ +P++R
Sbjct: 230 LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI 266
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 4e-04
Identities = 42/171 (24%), Positives = 70/171 (40%), Gaps = 25/171 (14%)
Query: 11 LHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF-- 67
L +A+ +EY + H DL A + DE +++ FGL ++ D + YS
Sbjct: 131 LQVARGMEYLAEQK--FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHA 188
Query: 68 ------TPPEYLRTGRVTPESVIYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNLQM 116
T E L+T R T +S ++SFG LL +LL+ G HI P +
Sbjct: 189 RLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLP 248
Query: 117 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 167
+ C + L ++ +C + +P RP + LV + +
Sbjct: 249 QPEYCPD---------SLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 4e-04
Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 26/157 (16%)
Query: 8 RVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN 64
R + + AQ LE+ + +Y DL +L D+DGN R+S GL + G++ +
Sbjct: 290 RAIFYTAQIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 65 LAFTPPEYLRTGRVTPESVIY----------SFGTLLLDLLSGKHIPPSHALDLIRDRNL 114
A T P ++ PE ++ + G L ++++ + P A
Sbjct: 349 YAGT-PGFM-----APELLLGEEYDFSVDYFALGVTLYEMIAAR--GPFRARG--EKVEN 398
Query: 115 QMLTDSCLEGQ--FTDDDGTELVRLASRCLQYEPRER 149
+ L LE + D LQ +P +R
Sbjct: 399 KELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 4e-04
Identities = 35/174 (20%), Positives = 58/174 (33%), Gaps = 35/174 (20%)
Query: 8 RVVLHLAQALEYCTSKGRALYH-DLNAYRILFD-------------EDGNPRLSTFGLMK 53
++ +A + + S + H DL IL E+ +S FGL K
Sbjct: 119 SLLRQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 54 NSRDGKSYSTNLAFTP--------PEYLR-------TGRVTPESVIYSFGTLLLDLLSGK 98
G+S P PE L R+T I+S G + +LS
Sbjct: 177 KLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236
Query: 99 HIPPSHALDLIRDRNLQM--LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150
P R+ N+ + ++ E L S+ + ++P +RP
Sbjct: 237 KHPFGD--KYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRP 288
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 5e-04
Identities = 33/164 (20%), Positives = 63/164 (38%), Gaps = 23/164 (14%)
Query: 14 AQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF--- 67
A + Y + H DL A + ED ++ FG+ ++ + Y
Sbjct: 148 ADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 68 -TPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSC 121
PE L+ G T S ++SFG +L ++ + + + L + + L D+C
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC 265
Query: 122 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 165
+ L L C QY P+ RP+ +++++ +
Sbjct: 266 PD---------MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 40.3 bits (94), Expect = 5e-04
Identities = 36/166 (21%), Positives = 62/166 (37%), Gaps = 24/166 (14%)
Query: 14 AQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF---- 67
A+ +E+ S+ + ++ DL A IL E ++ FGL ++ Y +
Sbjct: 203 AKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 261
Query: 68 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP------PSHALDLIRDRNLQMLT-DS 120
PE + T +S ++SFG LL ++ S P +++ +M D
Sbjct: 262 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-RMRAPDY 320
Query: 121 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 166
E+ + C EP +RP LV L L +
Sbjct: 321 TTP---------EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 6e-04
Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 22/147 (14%)
Query: 16 ALEYCTSKGRALYHDL---NAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF--TP- 69
ALE+ G +Y D+ N IL D +G+ L+ FGL K ++ F T
Sbjct: 171 ALEHLHKLG-IIYRDIKLEN---ILLDSNGHVVLTDFGLSKEFVADETERAY-DFCGTIE 225
Query: 70 ---PEYLRTGRVTPESVI--YSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 124
P+ +R G + + +S G L+ +LL+G P + ++ L+
Sbjct: 226 YMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA--SPFTVDG--EKNSQAEISRRILKS 281
Query: 125 Q--FTDDDGTELVRLASRCLQYEPRER 149
+ + + L R L +P++R
Sbjct: 282 EPPYPQEMSALAKDLIQRLLMKDPKKR 308
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 39.9 bits (94), Expect = 7e-04
Identities = 30/149 (20%), Positives = 54/149 (36%), Gaps = 31/149 (20%)
Query: 16 ALEYCTSKGRALYHDLN-AYR------ILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF- 67
ALEY H +R IL +ED + +++ FG K + +F
Sbjct: 142 ALEY--------LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 193
Query: 68 -TP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 122
T PE L S +++ G ++ L++G PP R N ++ +
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL--PP------FRAGNEYLIFQKII 245
Query: 123 EG--QFTDDDGTELVRLASRCLQYEPRER 149
+ F + + L + L + +R
Sbjct: 246 KLEYDFPEKFFPKARDLVEKLLVLDATKR 274
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 7e-04
Identities = 36/147 (24%), Positives = 51/147 (34%), Gaps = 25/147 (17%)
Query: 13 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST---NLAFT 68
L A+ Y K + H D+ I+ ED +L FG GK + T + +
Sbjct: 139 LVSAVGYLRLKD--IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYC 196
Query: 69 PPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 126
PE L G PE ++S G L L+ + P L+ +E
Sbjct: 197 APEVLM-GNPYRGPELEMWSLGVTLYTLVFEE--NPFCELEET------------VEAAI 241
Query: 127 TDDDG--TELVRLASRCLQYEPRERPN 151
EL+ L S LQ P R
Sbjct: 242 HPPYLVSKELMSLVSGLLQPVPERRTT 268
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 39.9 bits (94), Expect = 8e-04
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 33/149 (22%)
Query: 16 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAF--TPPEY 72
ALEY S+ +Y D+ ++ D+DG+ +++ FGL K DG + T F T PEY
Sbjct: 117 ALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT---FCGT-PEY 171
Query: 73 LRTGRVTPESVIY----------SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 122
L PE + G ++ +++ G+ P + +++ + L + L
Sbjct: 172 L-----APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFY------NQDHERLFELIL 218
Query: 123 EG--QFTDDDGTELVRLASRCLQYEPRER 149
+F E L + L+ +P++R
Sbjct: 219 MEEIRFPRTLSPEAKSLLAGLLKKDPKQR 247
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 340 | |||
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 99.98 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 99.97 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.97 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 99.97 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 99.97 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 99.97 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 99.97 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 99.97 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 99.97 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 99.97 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 99.97 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 99.97 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 99.97 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 99.97 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 99.97 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 99.97 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 99.97 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 99.97 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 99.97 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 99.97 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 99.97 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 99.97 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 99.97 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 99.97 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 99.97 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 99.97 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 99.97 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 99.97 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 99.97 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 99.97 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.97 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 99.97 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 99.97 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 99.97 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 99.97 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 99.97 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 99.97 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 99.97 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 99.97 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 99.96 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 99.96 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.96 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 99.96 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.96 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 99.96 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 99.96 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 99.96 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 99.96 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 99.96 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 99.96 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 99.96 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 99.96 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 99.96 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 99.96 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 99.96 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 99.96 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 99.96 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.96 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 99.96 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 99.96 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.96 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 99.96 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 99.96 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 99.96 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 99.96 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 99.96 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 99.96 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 99.96 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 99.96 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 99.96 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 99.96 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 99.96 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 99.96 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 99.96 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 99.96 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 99.96 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 99.96 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 99.96 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 99.96 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 99.96 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 99.96 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 99.96 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 99.96 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 99.96 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 99.96 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 99.96 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 99.96 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 99.96 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 99.96 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 99.96 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 99.96 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.96 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 99.96 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.96 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.96 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 99.96 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.96 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 99.96 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 99.96 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 99.96 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.96 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 99.96 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 99.96 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 99.96 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 99.96 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 99.96 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 99.96 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 99.96 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 99.96 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 99.96 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 99.96 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 99.96 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 99.96 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.96 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 99.96 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.96 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.96 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 99.96 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 99.96 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 99.96 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 99.96 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 99.96 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 99.96 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 99.96 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 99.96 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 99.96 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 99.96 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 99.96 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 99.96 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 99.96 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 99.96 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 99.96 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 99.96 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 99.96 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.96 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 99.96 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 99.96 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.96 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 99.96 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 99.96 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 99.96 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 99.96 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 99.96 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 99.96 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 99.96 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 99.96 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 99.96 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 99.96 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 99.96 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 99.96 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 99.96 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 99.96 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 99.96 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 99.96 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 99.96 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 99.96 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 99.96 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.96 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 99.96 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 99.96 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 99.96 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 99.96 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 99.96 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 99.96 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 99.96 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.96 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 99.96 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 99.95 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 99.95 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 99.95 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 99.95 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 99.95 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 99.95 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 99.95 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 99.95 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 99.95 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 99.95 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 99.95 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 99.95 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 99.95 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 99.95 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 99.95 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 99.95 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 99.95 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 99.95 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 99.95 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 99.95 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 99.95 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.95 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 99.95 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 99.95 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 99.95 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 99.95 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 99.95 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 99.95 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 99.95 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 99.95 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.95 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 99.95 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.95 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 99.95 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 99.95 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 99.95 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 99.95 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 99.95 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.95 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 99.95 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 99.95 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 99.95 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 99.95 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 99.95 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 99.95 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.95 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.95 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 99.95 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.95 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 99.95 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 99.95 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.95 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 99.95 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.95 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 99.95 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 99.94 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 99.94 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 99.94 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 99.94 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.94 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 99.94 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.93 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.92 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.9 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.9 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.87 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.84 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.81 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.79 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.78 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.77 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.77 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.75 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.74 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.74 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.73 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.72 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.68 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 99.67 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.66 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 99.66 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.65 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.65 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.64 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.64 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.64 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.64 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.63 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 99.62 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.62 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.62 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 99.62 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.61 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 99.61 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.61 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.61 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.6 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.6 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.6 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.59 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.58 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.57 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.56 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.55 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.55 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 99.54 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 99.54 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.54 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.53 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.53 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.52 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.51 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.51 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.5 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 99.46 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.46 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.45 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.45 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.44 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.44 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.43 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 99.42 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.42 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.42 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.41 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.41 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.4 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.4 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.4 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.4 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.4 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.39 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.39 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.38 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.38 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.37 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.37 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.37 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.37 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.37 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 99.37 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.36 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.36 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.35 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.35 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.35 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.35 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.34 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.34 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.33 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.33 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.32 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.32 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.32 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.32 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.32 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.32 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.31 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.31 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.31 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.31 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.3 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.3 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.29 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.28 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.28 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.28 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.28 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.26 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.26 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.25 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.24 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.24 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 99.23 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.23 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.21 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.19 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.19 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.18 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.17 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.17 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 99.17 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.16 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.16 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.15 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.15 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.14 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 99.13 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.13 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.12 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.12 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.12 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.12 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.12 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 99.11 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 99.11 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.1 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 99.1 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 99.1 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 99.1 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.09 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.09 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 99.09 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.09 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.09 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.09 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.08 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 99.08 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 99.07 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 99.06 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 99.05 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.05 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 99.05 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 99.05 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 99.04 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.04 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 99.03 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 99.03 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.03 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 99.03 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 99.02 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 99.02 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.02 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 99.01 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 99.01 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 99.01 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 99.0 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.0 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 98.99 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.99 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 98.99 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 98.98 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 98.98 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 98.97 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.96 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.95 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 98.94 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 98.92 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 98.89 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.89 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 98.88 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 98.88 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 98.87 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 98.85 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.84 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 98.84 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.84 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 98.84 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.82 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 98.82 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 98.81 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 98.81 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.8 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 98.78 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.78 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 98.72 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.7 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.7 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 98.68 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.67 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 98.65 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.63 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.62 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.58 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 98.55 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 98.54 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.46 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.45 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.43 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.41 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.29 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.27 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.25 | |
| 3ffl_A | 167 | Anaphase-promoting complex subunit 7; tetratricope | 98.2 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 98.2 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 98.16 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 98.15 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 98.14 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.13 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 98.05 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 98.04 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 98.02 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 97.98 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 97.95 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 97.88 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 97.79 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 97.76 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 97.74 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 97.63 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 97.5 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 97.46 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 97.37 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 97.28 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 97.24 | |
| 4e6h_A | 679 | MRNA 3'-END-processing protein RNA14; HAT domain, | 97.15 | |
| 2ff4_A | 388 | Probable regulatory protein EMBR; winged-helix, te | 97.15 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 97.14 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 97.02 | |
| 4e6h_A | 679 | MRNA 3'-END-processing protein RNA14; HAT domain, | 97.01 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 97.0 | |
| 4h7y_A | 161 | Dual specificity protein kinase TTK; mitotic check | 96.8 | |
| 3ffl_A | 167 | Anaphase-promoting complex subunit 7; tetratricope | 96.74 | |
| 4gns_B | 754 | Protein CSD3, chitin biosynthesis protein CHS6; FN | 96.5 | |
| 1zbp_A | 273 | Hypothetical protein VPA1032; alpha-beta protein, | 96.41 | |
| 3kae_A | 242 | CDC27, possible protein of nuclear scaffold; tetra | 96.23 | |
| 1zbp_A | 273 | Hypothetical protein VPA1032; alpha-beta protein, | 95.68 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 95.65 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 95.64 | |
| 4g26_A | 501 | Pentatricopeptide repeat-containing protein AT2G3 | 95.34 | |
| 4gns_B | 754 | Protein CSD3, chitin biosynthesis protein CHS6; FN | 95.28 | |
| 2uy1_A | 493 | Cleavage stimulation factor 77; RNA-binding protei | 95.14 | |
| 2uy1_A | 493 | Cleavage stimulation factor 77; RNA-binding protei | 94.94 | |
| 3txn_A | 394 | 26S proteasome regulatory complex subunit P42B; PC | 94.8 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 94.39 | |
| 1ya0_A | 497 | SMG-7 transcript variant 2; alpha-helical repeat, | 93.88 |
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-43 Score=343.95 Aligned_cols=312 Identities=20% Similarity=0.166 Sum_probs=220.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCccccCCcccCcccccCCCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTP 80 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 80 (340)
++|.+++.|+.||+.||.|||+++ ||||||||+||+++.+ .+||+|||+++.........||+.|+|||++.++ ++.
T Consensus 179 l~~~~~~~~~~qi~~aL~~lH~~g-iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~~~~~gt~~y~aPE~~~~~-~~~ 255 (681)
T 2pzi_A 179 LPVAEAIAYLLEILPALSYLHSIG-LVYNDLKPENIMLTEE-QLKLIDLGAVSRINSFGYLYGTPGFQAPEIVRTG-PTV 255 (681)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSS-CEEECCCTTCEETTCCSCCCCCTTTSCTTHHHHC-SCH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-CeecccChHHeEEeCC-cEEEEecccchhcccCCccCCCccccCHHHHcCC-CCC
Confidence 578999999999999999999999 9999999999999875 8999999999987777777899999999999755 488
Q ss_pred CcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC-HHHHHHHh
Q 019495 81 ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN-PKSLVTAL 159 (340)
Q Consensus 81 ~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps-~~~i~~~L 159 (340)
++|||||||++|+|++|..|+...... .+. ........+..+.++|.+||+.||++||+ ++++.+.|
T Consensus 256 ~sDi~slG~~l~~l~~g~~~~~~~~~~--------~~~----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l 323 (681)
T 2pzi_A 256 ATDIYTVGRTLAALTLDLPTRNGRYVD--------GLP----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQL 323 (681)
T ss_dssp HHHHHHHHHHHHHHHSCCCEETTEECS--------SCC----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHH
T ss_pred ceehhhhHHHHHHHHhCCCCCcccccc--------ccc----ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHH
Confidence 999999999999999998766532111 000 00011123467999999999999999995 55566666
Q ss_pred cccccCC-----CCCcccccCCCCCCCCCCCCCCCCccccchh----------------hHHHHHHHHhc--cCCchhhh
Q 019495 160 SPLQKET-----EVPSHVLMGIPHSASVSPLSPLGEACSRRDL----------------TAIHEILEKIS--YKDDEGVA 216 (340)
Q Consensus 160 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~----------------~~~~~~~~~~~--~~~~~~~~ 216 (340)
..+.... ..+.+.... ..+|.........+ ....++...+. ..++....
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~p~~~p~~~~ 395 (681)
T 2pzi_A 324 TGVLREVVAQDTGVPRPGLST--------IFSPSRSTFGVDLLVAHTDVYLDGQVHAEKLTANEIVTALSVPLVDPTDVA 395 (681)
T ss_dssp HHHHHHHHHHHHSCCCCCCCS--------SBCCCSSCCSSSHHHHGGGHHHHCCCCCCCCCHHHHHHHSCCBCCCTTSTT
T ss_pred HHHHHHhhccccCCCCCcccc--------cCCcccccccchhhhhhcccccccccccccCCHHHHHhhCCCccCCCCCcc
Confidence 5543211 111110000 00000000000000 00011111110 00000000
Q ss_pred h----hhh---hhhhhhH----------------HHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhH
Q 019495 217 N----ELS---FQMWTDQ----------------MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRS 273 (340)
Q Consensus 217 ~----~~~---~~~~~~~----------------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~ 273 (340)
. ... ++.-.+. ......+...|..++..|+|++|++.|+++++.+|+ ++.+++++|
T Consensus 396 a~~~~a~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg 474 (681)
T 2pzi_A 396 ASVLQATVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGW-RWRLVWYRA 474 (681)
T ss_dssp HHHHHHTTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCC-CHHHHHHHH
T ss_pred hHHhhcccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcc-hHHHHHHHH
Confidence 0 000 0000011 123346778889999999999999999999999999 888999999
Q ss_pred HHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 274 LCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 274 ~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
.+|...|++++|++.|++|++++|++..+|+++|.++..+|+|++ ++.|++|++++|++..++
T Consensus 475 ~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~ 537 (681)
T 2pzi_A 475 VAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAA 537 (681)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHH
Confidence 999999999999999999999999999999999999999999999 999999999999887654
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-40 Score=288.56 Aligned_cols=163 Identities=18% Similarity=0.270 Sum_probs=130.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
|+|.+++.|+.||+.||.|||+++ ||||||||+||||++++.+||+|||+++..... ....||+.|||||++.
T Consensus 129 l~~~~~~~i~~qia~gL~yLH~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~ 207 (307)
T 3omv_A 129 FQMFQLIDIARQTAQGMDYLHAKN-IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIR 207 (307)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhh
Confidence 589999999999999999999999 999999999999999999999999999865422 2457899999999996
Q ss_pred C---CCCCCCcceehHHHHHHHHhhCCCCCCcchhHH-HhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC
Q 019495 75 T---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150 (340)
Q Consensus 75 ~---~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 150 (340)
+ +.++.++|||||||++|||+||+.||....... +..........+. ....+..++..+.+|+.+||+.||++||
T Consensus 208 ~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~l~~li~~cl~~dP~~RP 286 (307)
T 3omv_A 208 MQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPD-LSKLYKNCPKAMKRLVADCVKKVKEERP 286 (307)
T ss_dssp CCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCC-STTSCTTSCHHHHHHHHHHTCSSSTTSC
T ss_pred ccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCC-cccccccchHHHHHHHHHHcCCCHhHCc
Confidence 4 358999999999999999999999997643222 1111111112211 1234566788999999999999999999
Q ss_pred CHHHHHHHhcccccC
Q 019495 151 NPKSLVTALSPLQKE 165 (340)
Q Consensus 151 s~~~i~~~L~~~~~~ 165 (340)
|+.+|+..|+.+...
T Consensus 287 s~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 287 LFPQILSSIELLQHS 301 (307)
T ss_dssp CHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHhcc
Confidence 999999999877544
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=285.58 Aligned_cols=156 Identities=20% Similarity=0.261 Sum_probs=132.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
|+|..+++|+.||+.||.|||+++ ||||||||+||||++++.+||+|||+++..... ....||+.|||||++.
T Consensus 142 l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~ 220 (308)
T 4gt4_A 142 LEPPDFVHLVAQIAAGMEYLSSHH-VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM 220 (308)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-CCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHh
Confidence 578999999999999999999999 999999999999999999999999999864322 2346789999999999
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
++.++.++|||||||++|||+| |+.||.+.....+...... ....+.|..++..+.+||.+||+.||++|||+.
T Consensus 221 ~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~-----~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ 295 (308)
T 4gt4_A 221 YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRN-----RQVLPCPDDCPAWVYALMIECWNEFPSRRPRFK 295 (308)
T ss_dssp HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHT-----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCcccchHHHHHHHHHHcCCChhHCcCHH
Confidence 9999999999999999999998 7888876554433322211 122345667889999999999999999999999
Q ss_pred HHHHHhccc
Q 019495 154 SLVTALSPL 162 (340)
Q Consensus 154 ~i~~~L~~~ 162 (340)
+|++.|+.+
T Consensus 296 ei~~~L~a~ 304 (308)
T 4gt4_A 296 DIHSRLRAW 304 (308)
T ss_dssp HHHHHHHTS
T ss_pred HHHHHHHhc
Confidence 999999876
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-39 Score=286.83 Aligned_cols=159 Identities=21% Similarity=0.256 Sum_probs=129.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
|+|.+++.|+.||+.||.|||+++ ||||||||+||||+.++.+||+|||+++..... ....||+.|||||++.
T Consensus 155 l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~ 233 (329)
T 4aoj_A 155 LGLGQLLAVASQVAAGMVYLAGLH-FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL 233 (329)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCC-eecccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhc
Confidence 578999999999999999999999 999999999999999999999999999865332 2346789999999999
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++|||||||++|||+| |+.||.......+...... ....+.|..+++++.+||.+||+.||++|||+.
T Consensus 234 ~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~-----g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ 308 (329)
T 4aoj_A 234 YRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ-----GRELERPRACPPEVYAIMRGCWQREPQQRHSIK 308 (329)
T ss_dssp TCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHH-----TCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHH
T ss_pred CCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-----CCCCCCcccccHHHHHHHHHHcCcChhHCcCHH
Confidence 9999999999999999999999 8988876544333222111 123345667789999999999999999999999
Q ss_pred HHHHHhcccccC
Q 019495 154 SLVTALSPLQKE 165 (340)
Q Consensus 154 ~i~~~L~~~~~~ 165 (340)
+|+..|+.+...
T Consensus 309 ei~~~L~~l~~~ 320 (329)
T 4aoj_A 309 DVHARLQALAQA 320 (329)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHhhC
Confidence 999999988654
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=285.79 Aligned_cols=159 Identities=23% Similarity=0.272 Sum_probs=134.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
|+|.+++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++..... ....||+.|||||++.
T Consensus 125 l~~~~~~~i~~qia~gl~yLH~~~-iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~ 203 (299)
T 4asz_A 125 LTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM 203 (299)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-cccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHc
Confidence 589999999999999999999999 999999999999999999999999999864332 2235789999999999
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
++.++.++|||||||++|||+| |+.||.+.....+....... .....|..++.++.+||.+||+.||++|||++
T Consensus 204 ~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~-----~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ 278 (299)
T 4asz_A 204 YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG-----RVLQRPRTCPQEVYELMLGCWQREPHMRKNIK 278 (299)
T ss_dssp HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-----CCCCCCccchHHHHHHHHHHcCCChhHCcCHH
Confidence 9999999999999999999999 89888775444333222211 12345667789999999999999999999999
Q ss_pred HHHHHhcccccC
Q 019495 154 SLVTALSPLQKE 165 (340)
Q Consensus 154 ~i~~~L~~~~~~ 165 (340)
+|...|+.+.+.
T Consensus 279 ~i~~~L~~~~~~ 290 (299)
T 4asz_A 279 GIHTLLQNLAKA 290 (299)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 999999887554
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=282.44 Aligned_cols=163 Identities=17% Similarity=0.134 Sum_probs=132.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC-CeEEeccCCCccCCCC---------CccccCCcccCc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDG---------KSYSTNLAFTPP 70 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~-~~kl~dfg~~~~~~~~---------~~~~~~~~y~aP 70 (340)
|++.....|+.||+.||.|||+++ ||||||||+||||+.+| .+||+|||+++..... ...+||+.||||
T Consensus 147 l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAP 225 (336)
T 4g3f_A 147 LPEDRALYYLGQALEGLEYLHTRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP 225 (336)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTT-EECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCH
Confidence 578899999999999999999999 99999999999999988 5999999999865432 234699999999
Q ss_pred ccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC
Q 019495 71 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150 (340)
Q Consensus 71 E~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 150 (340)
|++.+..++.++|||||||++|||+||+.||.......+........ .....++..+++.+.++|.+||+.||++||
T Consensus 226 E~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~---~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ 302 (336)
T 4g3f_A 226 EVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEP---PPIREIPPSCAPLTAQAIQEGLRKEPVHRA 302 (336)
T ss_dssp HHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSC---CGGGGSCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred HHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCC---CCchhcCccCCHHHHHHHHHHccCCHhHCc
Confidence 99999899999999999999999999999997643322222211111 111235566778999999999999999999
Q ss_pred CHHHHHHHhcccccCCC
Q 019495 151 NPKSLVTALSPLQKETE 167 (340)
Q Consensus 151 s~~~i~~~L~~~~~~~~ 167 (340)
|+.|+++.|........
T Consensus 303 sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 303 SAMELRRKVGKALQEVG 319 (336)
T ss_dssp CHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHhhhh
Confidence 99999988876655443
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=286.25 Aligned_cols=159 Identities=25% Similarity=0.351 Sum_probs=132.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
|+|..++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++...... +..||+.|||||++.
T Consensus 182 l~~~~~~~~~~qia~gl~yLH~~~-iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~ 260 (353)
T 4ase_A 182 LTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 260 (353)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhHhhCC-eecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHh
Confidence 578899999999999999999999 9999999999999999999999999998764432 235789999999999
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
++.++.++|||||||++|||+| |+.||.+......-...+ ........|..+++++.++|.+||+.||++|||+.
T Consensus 261 ~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i----~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~ 336 (353)
T 4ase_A 261 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL----KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 336 (353)
T ss_dssp HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHH----HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred cCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHH----HcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHH
Confidence 9999999999999999999998 898887643221111111 11223345666788999999999999999999999
Q ss_pred HHHHHhccccc
Q 019495 154 SLVTALSPLQK 164 (340)
Q Consensus 154 ~i~~~L~~~~~ 164 (340)
+|++.|+.+.+
T Consensus 337 eil~~L~~llq 347 (353)
T 4ase_A 337 ELVEHLGNLLQ 347 (353)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999987643
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=276.98 Aligned_cols=153 Identities=22% Similarity=0.267 Sum_probs=127.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
|++.+...|+.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+++..... .+.+||+.|||||++.+.
T Consensus 167 l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~ 245 (346)
T 4fih_A 167 MNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRL 245 (346)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccCcCcCCHHHHCCC
Confidence 578889999999999999999999 999999999999999999999999999875433 356899999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.|+.++|||||||++|||++|+.||.+............... .....+..+++++.+||.+||+.||++|||+.+++
T Consensus 246 ~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~---~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l 322 (346)
T 4fih_A 246 PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 322 (346)
T ss_dssp CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC---CCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHT
T ss_pred CCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC---CCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence 999999999999999999999999977544333222222111 11123345678999999999999999999999997
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
+
T Consensus 323 ~ 323 (346)
T 4fih_A 323 K 323 (346)
T ss_dssp T
T ss_pred c
Confidence 5
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=268.82 Aligned_cols=150 Identities=21% Similarity=0.277 Sum_probs=119.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
|++.+...++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++...+. .+..||+.|||||++.+..
T Consensus 109 l~e~~~~~~~~qi~~al~ylH~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~ 187 (275)
T 3hyh_A 109 MSEQEARRFFQQIISAVEYCHRHK-IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKL 187 (275)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTCCEEECCSSCC---------------CTTSCHHHHSSSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccccCChHHeEECCCCCEEEeecCCCeecCCCCccCCeeECcccCChhhhcCCC
Confidence 577889999999999999999999 999999999999999999999999999875543 3567999999999999877
Q ss_pred C-CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 78 V-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 78 ~-~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
+ +.++||||+||++|+|+||+.||.+.....+....... ...+|..+++.+.+++.+||+.||++|||+.+++
T Consensus 188 y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil 261 (275)
T 3hyh_A 188 YAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG------VYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIM 261 (275)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT------CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred CCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHH
Confidence 5 57899999999999999999999876554433322221 1234556678999999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
+
T Consensus 262 ~ 262 (275)
T 3hyh_A 262 Q 262 (275)
T ss_dssp H
T ss_pred c
Confidence 6
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-38 Score=278.58 Aligned_cols=151 Identities=19% Similarity=0.279 Sum_probs=128.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.+...|+.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+++..... .+.+||+.|||||++.+.
T Consensus 122 ~~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~ 200 (350)
T 4b9d_A 122 FQEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENK 200 (350)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCCEEEcccccceeecCCcccccccCCCccccCHHHHCCC
Confidence 356788899999999999999999 999999999999999999999999999876543 245799999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++|||||||++|||+||+.||.+.....+......... ...+..++.++.+||.+||+.||++|||+.+++
T Consensus 201 ~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~-----~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l 275 (350)
T 4b9d_A 201 PYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF-----PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSIL 275 (350)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC-----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-----CCCCccCCHHHHHHHHHHccCChhHCcCHHHHh
Confidence 999999999999999999999999987655444333322211 134455678999999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
+
T Consensus 276 ~ 276 (350)
T 4b9d_A 276 E 276 (350)
T ss_dssp T
T ss_pred c
Confidence 5
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-37 Score=267.92 Aligned_cols=152 Identities=18% Similarity=0.276 Sum_probs=121.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-CccccCCCCCCEEec-CCCCeEEeccCCCccCCCC--CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~-~iiH~dlk~~nill~-~~~~~kl~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~ 76 (340)
|++.....|+.||+.||.|||+++ +||||||||+||||+ .+|.+||+|||+++..... .+.+||+.|||||++. +
T Consensus 126 l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~~~~~GTp~YmAPE~~~-~ 204 (290)
T 3fpq_A 126 MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYE-E 204 (290)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGG-T
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCccCCcccCccccCHHHcC-C
Confidence 578889999999999999999975 499999999999997 4899999999999865443 3457999999999987 5
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhH-HHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i 155 (340)
+++.++|||||||++|||+||+.||.+.... .+......... +..++...++++.+||.+||+.||++|||+.++
T Consensus 205 ~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~ 280 (290)
T 3fpq_A 205 KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK----PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDL 280 (290)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC----CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCC----CCCCCccCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 6999999999999999999999999654222 12111111111 112233455789999999999999999999999
Q ss_pred HH
Q 019495 156 VT 157 (340)
Q Consensus 156 ~~ 157 (340)
++
T Consensus 281 l~ 282 (290)
T 3fpq_A 281 LN 282 (290)
T ss_dssp HT
T ss_pred hc
Confidence 85
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-37 Score=271.74 Aligned_cols=149 Identities=20% Similarity=0.285 Sum_probs=127.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
|++.....++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++..... .+.+||+.|||||++.
T Consensus 129 l~e~~~~~~~~qi~~al~ylH~~~-IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~ 207 (311)
T 4aw0_A 129 FDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 207 (311)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHc
Confidence 567788899999999999999999 999999999999999999999999999865422 3567999999999999
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+..++.++||||+||++|+|++|+.||.+.....+....... ...+|..+++++.+||.+||+.||++|||+.|
T Consensus 208 ~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e 281 (311)
T 4aw0_A 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL------EYDFPEKFFPKARDLVEKLLVLDATKRLGCEE 281 (311)
T ss_dssp HSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT------CCCCCTTCCHHHHHHHHHHSCSSGGGSTTSGG
T ss_pred CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCcccCHHHHHHHHHHccCCHhHCcChHH
Confidence 889999999999999999999999999876554443333222 12345567789999999999999999999998
Q ss_pred HH
Q 019495 155 LV 156 (340)
Q Consensus 155 i~ 156 (340)
++
T Consensus 282 ~~ 283 (311)
T 4aw0_A 282 ME 283 (311)
T ss_dssp GT
T ss_pred Hc
Confidence 64
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-37 Score=270.20 Aligned_cols=150 Identities=24% Similarity=0.308 Sum_probs=125.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC----CCccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~ 76 (340)
|++.....++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++.... ..+.+||+.|||||++.+.
T Consensus 123 l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~ 201 (304)
T 3ubd_A 123 FTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 201 (304)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTSCEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHeEEcCCCCEEecccccceeccCCCccccccccCcccCCHHHhccC
Confidence 567888999999999999999999 99999999999999999999999999986432 2356799999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH----
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP---- 152 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~---- 152 (340)
.++.++||||+||++|||+||+.||.+.....+....... ...+|..+++++.+||.+||+.||++|||+
T Consensus 202 ~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~ 275 (304)
T 3ubd_A 202 GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA------KLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDG 275 (304)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTT
T ss_pred CCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcC------CCCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCC
Confidence 9999999999999999999999999876554443333222 123456677899999999999999999985
Q ss_pred -HHHHH
Q 019495 153 -KSLVT 157 (340)
Q Consensus 153 -~~i~~ 157 (340)
+++++
T Consensus 276 ~~eil~ 281 (304)
T 3ubd_A 276 VEEIKR 281 (304)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 56653
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=277.23 Aligned_cols=153 Identities=22% Similarity=0.267 Sum_probs=127.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
|++.+...|+.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+++..... .+.+||+.|||||++.+.
T Consensus 244 l~e~~~~~~~~qil~aL~ylH~~~-IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~ 322 (423)
T 4fie_A 244 MNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRL 322 (423)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEecCccceECCCCCccccccccCcCcCCHHHHCCC
Confidence 567888999999999999999999 999999999999999999999999999865433 356799999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.|+.++|||||||++|||++|+.||.+............... .....+..+++.+.+||.+||+.||++|||+.|++
T Consensus 323 ~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~---~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell 399 (423)
T 4fie_A 323 PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 399 (423)
T ss_dssp CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC---CCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHT
T ss_pred CCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC---CCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence 999999999999999999999999977544333222222111 11123445678999999999999999999999997
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
+
T Consensus 400 ~ 400 (423)
T 4fie_A 400 K 400 (423)
T ss_dssp T
T ss_pred c
Confidence 5
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-37 Score=270.97 Aligned_cols=164 Identities=15% Similarity=0.204 Sum_probs=123.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhC--------CCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC--------ccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSK--------GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--------SYSTN 64 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~--------~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~--------~~~~~ 64 (340)
++|..+++++.|++.||.|||++ + ||||||||+|||++.++.+||+|||+++...... ...||
T Consensus 97 l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT 175 (303)
T 3hmm_A 97 VTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 175 (303)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-EeeccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeeccccccc
Confidence 57899999999999999999987 6 9999999999999999999999999997653321 24689
Q ss_pred CcccCcccccCC------CCCCCcceehHHHHHHHHhhCCCCCCcchhHHH-----------hhhhhccccccccCCCCC
Q 019495 65 LAFTPPEYLRTG------RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI-----------RDRNLQMLTDSCLEGQFT 127 (340)
Q Consensus 65 ~~y~aPE~~~~~------~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~ 127 (340)
+.|||||++.+. .++.++|||||||++|||+||.+|+........ .......+......+.+|
T Consensus 176 ~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p 255 (303)
T 3hmm_A 176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIP 255 (303)
T ss_dssp GGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCC
T ss_pred ccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCC
Confidence 999999999753 367799999999999999999866532110000 000001111112222222
Q ss_pred -----chhHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccccC
Q 019495 128 -----DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 165 (340)
Q Consensus 128 -----~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 165 (340)
..++..+.+|+.+||+.||++|||+.+|++.|+.+.+.
T Consensus 256 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 256 NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp GGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 33567899999999999999999999999999887654
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-35 Score=257.28 Aligned_cols=148 Identities=20% Similarity=0.324 Sum_probs=109.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----------------CccccCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----------------KSYSTNL 65 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----------------~~~~~~~ 65 (340)
++.....|+.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++..... .+.+||+
T Consensus 116 ~~~~~~~i~~qi~~al~ylH~~~-IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~ 194 (299)
T 4g31_A 116 ERSVCLHIFLQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTK 194 (299)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCCCC--------------------------CCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCc-CccccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCc
Confidence 34567889999999999999999 999999999999999999999999999865432 2346899
Q ss_pred cccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccC
Q 019495 66 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 145 (340)
Q Consensus 66 ~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~ 145 (340)
.|||||++.+..++.++|||||||++|||++ ||........ .+..+....++ ......++.+.+++.+||+.|
T Consensus 195 ~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~---~~~~~~~~~~p-~~~~~~~~~~~~li~~~L~~d 267 (299)
T 4g31_A 195 LYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVR---TLTDVRNLKFP-PLFTQKYPCEYVMVQDMLSPS 267 (299)
T ss_dssp TTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH---HHHHHHTTCCC-HHHHHHCHHHHHHHHHHTCSS
T ss_pred cccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHH---HHHHHhcCCCC-CCCcccCHHHHHHHHHHcCCC
Confidence 9999999998899999999999999999996 5654321111 11111110000 111223456788999999999
Q ss_pred CCCCCCHHHHHH
Q 019495 146 PRERPNPKSLVT 157 (340)
Q Consensus 146 p~~Rps~~~i~~ 157 (340)
|++|||+.++++
T Consensus 268 P~~Rps~~eil~ 279 (299)
T 4g31_A 268 PMERPEAINIIE 279 (299)
T ss_dssp GGGSCCHHHHHT
T ss_pred hhHCcCHHHHhc
Confidence 999999999986
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-34 Score=258.74 Aligned_cols=156 Identities=17% Similarity=0.285 Sum_probs=121.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC--------CCccccCCcccCccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--------GKSYSTNLAFTPPEY 72 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~--------~~~~~~~~~y~aPE~ 72 (340)
|++.....++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++.... ..+.+||+.|||||+
T Consensus 155 l~~~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv 233 (398)
T 4b99_A 155 LTLEHVRYFLYQLLRGLKYMHSAQ-VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 233 (398)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCc-CcCCCcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHH
Confidence 567888999999999999999999 99999999999999999999999999986432 235689999999999
Q ss_pred ccCC-CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccc------------------ccCCC-------C
Q 019495 73 LRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS------------------CLEGQ-------F 126 (340)
Q Consensus 73 ~~~~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~-------~ 126 (340)
+.+. .++.++||||+|||+|||++|++||.+................+ .+... .
T Consensus 234 ~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (398)
T 4b99_A 234 MLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETV 313 (398)
T ss_dssp HTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHH
T ss_pred hcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHh
Confidence 8875 46899999999999999999999997754322221111110000 00000 1
Q ss_pred CchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 127 TDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 127 ~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.+..++++.+||.+||..||++|||+.++++
T Consensus 314 ~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 314 YPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp STTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 1234678999999999999999999999985
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=254.89 Aligned_cols=156 Identities=21% Similarity=0.255 Sum_probs=116.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCC-CCeEEeccCCCccCCCC---------------------
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSRDG--------------------- 58 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~-~~~kl~dfg~~~~~~~~--------------------- 58 (340)
|++.+...++.||+.||.|||++| ||||||||+|||++.+ +.+||+|||+++...+.
T Consensus 114 l~~~~~~~~~~qll~al~ylH~~g-IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (361)
T 4f9c_A 114 LSFQEVREYMLNLFKALKRIHQFG-IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNK 192 (361)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC-------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccccccccccccccccccccc
Confidence 567888999999999999999999 9999999999999876 78999999999754321
Q ss_pred -----------CccccCCcccCcccccCC-CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhh------------
Q 019495 59 -----------KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL------------ 114 (340)
Q Consensus 59 -----------~~~~~~~~y~aPE~~~~~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~------------ 114 (340)
.+.+||+.|||||++.+. .++.++||||+||++|||++|+.||.........-..+
T Consensus 193 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~ 272 (361)
T 4f9c_A 193 CSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQA 272 (361)
T ss_dssp -------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHH
T ss_pred ccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhh
Confidence 134689999999999875 48999999999999999999999985432110000000
Q ss_pred --------------------------ccc---c--------ccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 115 --------------------------QML---T--------DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 115 --------------------------~~~---~--------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
... . ............++++.+|+.+||+.||++|||++|+++
T Consensus 273 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~ 352 (361)
T 4f9c_A 273 AKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALL 352 (361)
T ss_dssp HHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred hhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 000 0 000000112335678999999999999999999999985
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=99.98 E-value=5.2e-33 Score=264.95 Aligned_cols=153 Identities=22% Similarity=0.248 Sum_probs=124.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--CccccCCcccCcccccC-CC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRT-GR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~-~~ 77 (340)
|++.....++.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+++..... .+.+||+.|||||++.+ ..
T Consensus 289 l~E~~a~~y~~qIl~aL~yLH~~g-IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~~~~~ 367 (689)
T 3v5w_A 289 FSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVA 367 (689)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCCCCSCCSCGGGCCHHHHSTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHeEEeCCCCEEecccceeeecCCCCCCCccCCcCccCHHHHhCCCC
Confidence 467788899999999999999999 999999999999999999999999999876544 45789999999999975 47
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC-----H
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN-----P 152 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps-----~ 152 (340)
++.++|+||+||++|||++|.+||.+........ ...... .....+|..+++++.+||.+||+.||.+|++ +
T Consensus 368 y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~-i~~~i~--~~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga 444 (689)
T 3v5w_A 368 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTL--TMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGA 444 (689)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHH-HHHHHH--HCCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTH
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHhhc--CCCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCH
Confidence 8999999999999999999999997643211110 011111 1122456667889999999999999999998 6
Q ss_pred HHHHH
Q 019495 153 KSLVT 157 (340)
Q Consensus 153 ~~i~~ 157 (340)
.+|+.
T Consensus 445 ~ei~~ 449 (689)
T 3v5w_A 445 QEVKE 449 (689)
T ss_dssp HHHTT
T ss_pred HHHhc
Confidence 77764
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.2e-32 Score=239.07 Aligned_cols=164 Identities=20% Similarity=0.309 Sum_probs=125.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-CccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~-~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~ 75 (340)
+++..++.++.||+.||.|||+++ +|+||||||+||+++.++.+||+|||+++..... ....||+.|+|||++.+
T Consensus 134 ~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~ 213 (309)
T 3p86_A 134 LDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRD 213 (309)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-----------------CCTTSCHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccccccccCCCCccccChhhhcC
Confidence 467889999999999999999986 4999999999999999999999999998754433 34568999999999998
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i 155 (340)
..++.++||||||+++|+|++|+.||............... ......+..+++.+.+++.+||+.||.+|||+.++
T Consensus 214 ~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l 289 (309)
T 3p86_A 214 EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK----CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATI 289 (309)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHS----CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc----CCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 88999999999999999999999998765433322211111 12234556677899999999999999999999999
Q ss_pred HHHhcccccCCCC
Q 019495 156 VTALSPLQKETEV 168 (340)
Q Consensus 156 ~~~L~~~~~~~~~ 168 (340)
++.|+.+.....+
T Consensus 290 l~~L~~~~~~~~p 302 (309)
T 3p86_A 290 MDLLRPLIKSAVP 302 (309)
T ss_dssp HHHHHHHHC----
T ss_pred HHHHHHHHHhCCC
Confidence 9999998776543
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-32 Score=259.04 Aligned_cols=154 Identities=16% Similarity=0.121 Sum_probs=126.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCC--CCeEEeccCCCccCCCCC---ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED--GNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~--~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~ 75 (340)
|++.+...++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++...... +.+||+.|||||++.+
T Consensus 252 l~e~~~~~~~~qi~~al~ylH~~~-iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~ 330 (573)
T 3uto_A 252 MSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEG 330 (573)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhccccCCCCCCEEEeeccceeEccCCCceeeeEECccccCHHHhCC
Confidence 356788899999999999999999 9999999999999854 889999999998876553 4579999999999999
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i 155 (340)
..++.++||||+||++|||++|..||.+.............. ..+.......++..+.+||.+||+.||.+|||+.++
T Consensus 331 ~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~ 408 (573)
T 3uto_A 331 KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCD--WNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQA 408 (573)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTC--CCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCC--CCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 899999999999999999999999998765443332222211 111122233456889999999999999999999999
Q ss_pred HH
Q 019495 156 VT 157 (340)
Q Consensus 156 ~~ 157 (340)
++
T Consensus 409 l~ 410 (573)
T 3uto_A 409 LE 410 (573)
T ss_dssp HH
T ss_pred hc
Confidence 86
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=239.87 Aligned_cols=160 Identities=16% Similarity=0.248 Sum_probs=129.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...++..|+|||++.
T Consensus 112 ~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 190 (325)
T 3kex_A 112 LGPQLLLNWGVQIAKGMYYLEEHG-MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 190 (325)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHTT-CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-CCCCccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhc
Confidence 467788999999999999999999 9999999999999999999999999998754332 234677899999999
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
++.++.++||||||+++|+|++ |..||.......+...... ......+..++..+.+++.+||+.||.+||++.
T Consensus 191 ~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ 265 (325)
T 3kex_A 191 FGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEK-----GERLAQPQICTIDVYMVMVKCWMIDENIRPTFK 265 (325)
T ss_dssp HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHT-----TCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHH
T ss_pred cCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHc-----CCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHH
Confidence 8889999999999999999999 9988876433322221111 112223444566789999999999999999999
Q ss_pred HHHHHhcccccCC
Q 019495 154 SLVTALSPLQKET 166 (340)
Q Consensus 154 ~i~~~L~~~~~~~ 166 (340)
++++.|..+....
T Consensus 266 el~~~l~~~~~~~ 278 (325)
T 3kex_A 266 ELANEFTRMARDP 278 (325)
T ss_dssp HHHHHHHHHTTSH
T ss_pred HHHHHHHHHHhcc
Confidence 9999998886543
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-31 Score=242.59 Aligned_cols=158 Identities=22% Similarity=0.337 Sum_probs=129.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++...+.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...+++.|+|||++.
T Consensus 200 ~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~ 278 (370)
T 2psq_A 200 MTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 278 (370)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhc
Confidence 467888999999999999999999 9999999999999999999999999998654322 234567899999999
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++|||||||++|||++ |+.||.......+.... ........+..++..+.+++.+||+.||++||++.
T Consensus 279 ~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ 353 (370)
T 2psq_A 279 DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL-----KEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 353 (370)
T ss_dssp TCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH-----HTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-----hcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence 8889999999999999999999 88888664333222111 11122344556778999999999999999999999
Q ss_pred HHHHHhccccc
Q 019495 154 SLVTALSPLQK 164 (340)
Q Consensus 154 ~i~~~L~~~~~ 164 (340)
++++.|+.+..
T Consensus 354 ell~~L~~il~ 364 (370)
T 2psq_A 354 QLVEDLDRILT 364 (370)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988753
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-31 Score=236.35 Aligned_cols=164 Identities=24% Similarity=0.454 Sum_probs=133.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
++|..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||++.
T Consensus 136 ~~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 214 (321)
T 2qkw_B 136 MSWEQRLEICIGAARGLHYLHTRA-IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFI 214 (321)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHhcCCC-eecCCCCHHHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhc
Confidence 478899999999999999999999 999999999999999999999999998764322 1235789999999998
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCcchhH-----------HHhhhhhccccccccCCCCCchhHHHHHHHHHHhhc
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-----------LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 143 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 143 (340)
++.++.++||||||+++|+|++|+.||...... ......+....++......+..++..+.+++.+||+
T Consensus 215 ~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 294 (321)
T 2qkw_B 215 KGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLA 294 (321)
T ss_dssp HCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTC
T ss_pred CCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcC
Confidence 888999999999999999999999988653211 111112233333444445667788999999999999
Q ss_pred cCCCCCCCHHHHHHHhcccccC
Q 019495 144 YEPRERPNPKSLVTALSPLQKE 165 (340)
Q Consensus 144 ~~p~~Rps~~~i~~~L~~~~~~ 165 (340)
.||++|||+.++++.|+.+.+.
T Consensus 295 ~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 295 LSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp SSGGGSCCHHHHHHHHHHHHHS
T ss_pred CCcccCcCHHHHHHHHHHHhhc
Confidence 9999999999999999877543
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.7e-32 Score=245.14 Aligned_cols=163 Identities=17% Similarity=0.194 Sum_probs=130.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEec--CCCCeEEeccCCCccCCCC-----------CccccCCcc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDGNPRLSTFGLMKNSRDG-----------KSYSTNLAF 67 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~--~~~~~kl~dfg~~~~~~~~-----------~~~~~~~~y 67 (340)
+++.+++.|+.||+.||.|||+++ |+||||||+||+++ .++.+||+|||+++..... ....||+.|
T Consensus 149 l~~~~~~~i~~qi~~~l~~lH~~~-iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y 227 (364)
T 3op5_A 149 FSRKTVLQLSLRILDILEYIHEHE-YVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEF 227 (364)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCc
Confidence 578899999999999999999999 99999999999998 8899999999999754322 223489999
Q ss_pred cCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhh--------hhhccccccccCCCCCchhHHHHHHHHH
Q 019495 68 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD--------RNLQMLTDSCLEGQFTDDDGTELVRLAS 139 (340)
Q Consensus 68 ~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~li~ 139 (340)
+|||++.+..++.++|||||||++|||++|+.||.......... .....+.+.++. ...++..+.+++.
T Consensus 228 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~ 304 (364)
T 3op5_A 228 TSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFP---AANAPGEIAKYME 304 (364)
T ss_dssp CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSC---TTCCCHHHHHHHH
T ss_pred cCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcc---cccCHHHHHHHHH
Confidence 99999998889999999999999999999999987532111100 111122222221 1334578999999
Q ss_pred HhhccCCCCCCCHHHHHHHhcccccCCC
Q 019495 140 RCLQYEPRERPNPKSLVTALSPLQKETE 167 (340)
Q Consensus 140 ~cl~~~p~~Rps~~~i~~~L~~~~~~~~ 167 (340)
.||+.||.+||++.+|++.|+.+.....
T Consensus 305 ~cl~~~p~~RP~~~~l~~~l~~~~~~~~ 332 (364)
T 3op5_A 305 TVKLLDYTEKPLYENLRDILLQGLKAIG 332 (364)
T ss_dssp HHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 9999999999999999999988876543
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=237.75 Aligned_cols=162 Identities=20% Similarity=0.331 Sum_probs=128.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------------------ccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------------------SYS 62 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------------------~~~ 62 (340)
++|.+++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...
T Consensus 105 ~~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (310)
T 3s95_A 105 YPWSQRVSFAKDIASGMAYLHSMN-IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV 183 (310)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEECTTSCEEECCCTTCEECC--------------------CCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCcCeEEECCCCCEEEeecccceecccccccccccccccccccccccccC
Confidence 478899999999999999999999 9999999999999999999999999987653321 346
Q ss_pred cCCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhh
Q 019495 63 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 142 (340)
Q Consensus 63 ~~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 142 (340)
||+.|+|||++.+..++.++||||||+++|+|++|..|+........... ...........+..++..+.+++.+||
T Consensus 184 gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~li~~~l 260 (310)
T 3s95_A 184 GNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG---LNVRGFLDRYCPPNCPPSFFPITVRCC 260 (310)
T ss_dssp SCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSS---BCHHHHHHHTCCTTCCTTHHHHHHHHT
T ss_pred CCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHh---hhhhccccccCCCCCCHHHHHHHHHHc
Confidence 89999999999988899999999999999999999988764322111000 000001111234455578999999999
Q ss_pred ccCCCCCCCHHHHHHHhcccccCC
Q 019495 143 QYEPRERPNPKSLVTALSPLQKET 166 (340)
Q Consensus 143 ~~~p~~Rps~~~i~~~L~~~~~~~ 166 (340)
+.||++|||+.++++.|+.+....
T Consensus 261 ~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 261 DLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp CSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCChhhCcCHHHHHHHHHHHHHhc
Confidence 999999999999999999886553
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-31 Score=236.90 Aligned_cols=150 Identities=24% Similarity=0.373 Sum_probs=125.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....||+.|+|||++.+..
T Consensus 111 l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 189 (328)
T 3fe3_A 111 MKEKEARSKFRQIVSAVQYCHQKR-IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKK 189 (328)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EeccCCCHHHEEEcCCCCEEEeeccCceecCCCCccccccCCcceeCcccccCCC
Confidence 467788999999999999999999 999999999999999999999999999765443 3457899999999998777
Q ss_pred C-CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 78 V-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 78 ~-~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
+ +.++|||||||++|+|++|+.||.+.....+....... ...+|...+..+.+++.+||+.||.+|||+.+++
T Consensus 190 ~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil 263 (328)
T 3fe3_A 190 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG------KYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIM 263 (328)
T ss_dssp CCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHT
T ss_pred cCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 5 47899999999999999999999876554443333222 1133445678899999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
+
T Consensus 264 ~ 264 (328)
T 3fe3_A 264 K 264 (328)
T ss_dssp T
T ss_pred c
Confidence 5
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-31 Score=235.04 Aligned_cols=165 Identities=12% Similarity=0.089 Sum_probs=128.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCC-----eEEeccCCCccCCCC-----------CccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN-----PRLSTFGLMKNSRDG-----------KSYSTN 64 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~-----~kl~dfg~~~~~~~~-----------~~~~~~ 64 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.++. +||+|||+++..... ....+|
T Consensus 103 ~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt 181 (298)
T 1csn_A 103 FSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGT 181 (298)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCC
Confidence 478899999999999999999999 999999999999987765 999999998765432 234578
Q ss_pred CcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchh---HHHhhhhhccccccccCCCCCchhHHHHHHHHHHh
Q 019495 65 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL---DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 141 (340)
Q Consensus 65 ~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 141 (340)
+.|+|||++.+..++.++||||||+++|+|++|+.||..... ............. .........++..+.+++.+|
T Consensus 182 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~ 260 (298)
T 1csn_A 182 ARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS-TPLRELCAGFPEEFYKYMHYA 260 (298)
T ss_dssp TTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHH-SCHHHHTTTSCHHHHHHHHHH
T ss_pred cccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccC-ccHHHHHhhCcHHHHHHHHHH
Confidence 999999999988899999999999999999999999865311 1000000000000 000111224557899999999
Q ss_pred hccCCCCCCCHHHHHHHhcccccCCC
Q 019495 142 LQYEPRERPNPKSLVTALSPLQKETE 167 (340)
Q Consensus 142 l~~~p~~Rps~~~i~~~L~~~~~~~~ 167 (340)
|+.||++||++.+|++.|+.+.....
T Consensus 261 l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 261 RNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp HHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred hcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999998876543
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=237.18 Aligned_cols=161 Identities=19% Similarity=0.238 Sum_probs=123.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHH--------hCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC--------ccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCT--------SKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--------SYSTN 64 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH--------~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~--------~~~~~ 64 (340)
+++..++.++.||+.||.||| +.+ |+||||||+||+++.++.+||+|||+++...... ...+|
T Consensus 102 ~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt 180 (301)
T 3q4u_A 102 LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA-IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 180 (301)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-eecCCCChHhEEEcCCCCEEEeeCCCeeecccccccccccccccccc
Confidence 468889999999999999999 888 9999999999999999999999999987543322 23689
Q ss_pred CcccCcccccCC------CCCCCcceehHHHHHHHHhhC----------CCCCCcchh-----HHHhhhhhccccccccC
Q 019495 65 LAFTPPEYLRTG------RVTPESVIYSFGTLLLDLLSG----------KHIPPSHAL-----DLIRDRNLQMLTDSCLE 123 (340)
Q Consensus 65 ~~y~aPE~~~~~------~~~~~~Di~s~G~il~el~~g----------~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 123 (340)
+.|+|||++.+. .++.++||||||+++|||++| ..||..... ..+..........+...
T Consensus 181 ~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (301)
T 3q4u_A 181 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIP 260 (301)
T ss_dssp GGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCC
T ss_pred cceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCC
Confidence 999999999875 445789999999999999999 767644211 11111111111111111
Q ss_pred -CCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 019495 124 -GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 162 (340)
Q Consensus 124 -~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~ 162 (340)
...+..++..+.+++.+||+.||++|||+.+|++.|+.+
T Consensus 261 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 261 NRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp GGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred hhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 112344678999999999999999999999999999865
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=233.83 Aligned_cols=150 Identities=19% Similarity=0.323 Sum_probs=125.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC----CCccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.+|.+||+|||+++.... ..+..||+.|+|||++.+.
T Consensus 102 ~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 180 (337)
T 1o6l_A 102 FTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 180 (337)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcccccccChhhCChhhhcCC
Confidence 467788899999999999999999 99999999999999999999999999876332 2345789999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC-----C
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP-----N 151 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s 151 (340)
.++.++|+|||||++|||++|+.||.......+....... ...+|...+..+.++|.+||+.||.+|| +
T Consensus 181 ~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~ 254 (337)
T 1o6l_A 181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSD 254 (337)
T ss_dssp CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTT
T ss_pred CCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCC
Confidence 8999999999999999999999999765444333222221 1234556678999999999999999999 8
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.+|++
T Consensus 255 ~~ei~~ 260 (337)
T 1o6l_A 255 AKEVME 260 (337)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 888875
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-31 Score=236.98 Aligned_cols=161 Identities=29% Similarity=0.533 Sum_probs=131.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhC---CCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSK---GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEY 72 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~---~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~ 72 (340)
++|..+..++.||+.||.|||+. + |+||||||+||+++.++.+||+|||+++...... ...||+.|+|||+
T Consensus 128 ~~~~~~~~i~~~i~~~l~~lH~~~~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~ 206 (326)
T 3uim_A 128 LDWPKRQRIALGSARGLAYLHDHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 206 (326)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHSSSSC-EECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCCC-eEeCCCchhhEEECCCCCEEeccCccccccCcccccccccccCCcCccCHHH
Confidence 57889999999999999999999 8 9999999999999999999999999998654322 2358999999999
Q ss_pred ccCCCCCCCcceehHHHHHHHHhhCCCCCCcchh-------------HHHhhhhhccccccccCCCCCchhHHHHHHHHH
Q 019495 73 LRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-------------DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 139 (340)
Q Consensus 73 ~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 139 (340)
+.+..++.++||||||+++|+|++|+.||..... ............+......++...+..+.+++.
T Consensus 207 ~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 286 (326)
T 3uim_A 207 LSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVAL 286 (326)
T ss_dssp HHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHH
T ss_pred hccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHH
Confidence 9888899999999999999999999998853211 001111223333334445566777899999999
Q ss_pred HhhccCCCCCCCHHHHHHHhccc
Q 019495 140 RCLQYEPRERPNPKSLVTALSPL 162 (340)
Q Consensus 140 ~cl~~~p~~Rps~~~i~~~L~~~ 162 (340)
+||+.||.+|||+.+|++.|+..
T Consensus 287 ~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 287 LCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp HHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HHhCcCCccCCCHHHHHHHhcCc
Confidence 99999999999999999999864
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-31 Score=236.87 Aligned_cols=162 Identities=19% Similarity=0.274 Sum_probs=125.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++.++..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...+++.|+|||++.
T Consensus 134 ~~~~~~~~i~~qi~~al~~LH~~~-ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 212 (323)
T 3qup_A 134 LPLQTLVRFMVDIACGMEYLSSRN-FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLA 212 (323)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHcCC-cccCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhc
Confidence 467889999999999999999999 9999999999999999999999999987654332 234567899999999
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++||||||+++|+|++ |..||............... .....+..++..+.+++.+||+.||++|||+.
T Consensus 213 ~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ 287 (323)
T 3qup_A 213 DNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGG-----NRLKQPPECMEEVYDLMYQCWSADPKQRPSFT 287 (323)
T ss_dssp HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT-----CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHH
T ss_pred CCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcC-----CCCCCCCccCHHHHHHHHHHccCChhhCcCHH
Confidence 8889999999999999999999 88887654333222211111 12233455668899999999999999999999
Q ss_pred HHHHHhcccccCCCC
Q 019495 154 SLVTALSPLQKETEV 168 (340)
Q Consensus 154 ~i~~~L~~~~~~~~~ 168 (340)
++++.|+.+...+..
T Consensus 288 ~l~~~l~~~l~~~~~ 302 (323)
T 3qup_A 288 CLRMELENILGHLSV 302 (323)
T ss_dssp HHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999998776654
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-31 Score=232.10 Aligned_cols=162 Identities=19% Similarity=0.326 Sum_probs=121.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
+++.+++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||++.
T Consensus 117 ~~~~~~~~i~~qi~~~L~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 195 (289)
T 3og7_A 117 FEMKKLIDIARQTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195 (289)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECCCC------------------CCCTTCCHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhc
Confidence 467889999999999999999999 999999999999999999999999998754321 2346799999999986
Q ss_pred ---CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhh-ccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC
Q 019495 75 ---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL-QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150 (340)
Q Consensus 75 ---~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 150 (340)
+..++.++||||||+++|+|++|+.||............. .....+ ........++..+.+++.+||+.||++||
T Consensus 196 ~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rp 274 (289)
T 3og7_A 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSP-DLSKVRSNCPKRMKRLMAECLKKKRDERP 274 (289)
T ss_dssp ----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCC-CTTSSCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred ccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCc-chhhccccCCHHHHHHHHHHccCChhhCC
Confidence 4567889999999999999999999986532221111111 111111 11123445678999999999999999999
Q ss_pred CHHHHHHHhccccc
Q 019495 151 NPKSLVTALSPLQK 164 (340)
Q Consensus 151 s~~~i~~~L~~~~~ 164 (340)
|+.++++.|+.+.+
T Consensus 275 s~~ell~~L~~l~~ 288 (289)
T 3og7_A 275 SFPRILAEIEELAR 288 (289)
T ss_dssp CHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHhh
Confidence 99999999988743
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-31 Score=232.17 Aligned_cols=153 Identities=20% Similarity=0.245 Sum_probs=124.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||++...... ....||+.|+|||++.+.
T Consensus 113 ~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 191 (297)
T 3fxz_A 113 MDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 191 (297)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCccCCcCccChhhhcCC
Confidence 467788999999999999999999 999999999999999999999999998765433 234689999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++||||||+++|+|++|..||............... .......+..++..+.+++.+||+.||++|||+.+++
T Consensus 192 ~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 268 (297)
T 3fxz_A 192 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN---GTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELL 268 (297)
T ss_dssp CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHH---CSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHT
T ss_pred CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC---CCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHh
Confidence 8999999999999999999999998765332221111111 1111223455678899999999999999999999997
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
+
T Consensus 269 ~ 269 (297)
T 3fxz_A 269 Q 269 (297)
T ss_dssp T
T ss_pred h
Confidence 5
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=235.81 Aligned_cols=161 Identities=22% Similarity=0.349 Sum_probs=126.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCC--------eEEeccCCCccCCCCCccccCCcccCccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN--------PRLSTFGLMKNSRDGKSYSTNLAFTPPEY 72 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~--------~kl~dfg~~~~~~~~~~~~~~~~y~aPE~ 72 (340)
+++.++..++.||+.||.|||+++ |+||||||+||+++.++. +||+|||++..........+++.|+|||+
T Consensus 110 ~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~y~aPE~ 188 (289)
T 4fvq_A 110 INILWKLEVAKQLAAAMHFLEENT-LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPEC 188 (289)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCHHHHHHTTTTSCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCC-eECCCcCcceEEEecCCcccccccceeeeccCcccccccCccccCCcCcccCHHH
Confidence 467889999999999999999999 999999999999988877 99999999877665555678999999999
Q ss_pred ccC-CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 73 LRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 73 ~~~-~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
+.+ ..++.++||||||+++|+|++|+.|+............... ....+...+..+.+++.+||+.||++|||
T Consensus 189 ~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps 262 (289)
T 4fvq_A 189 IENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED------RHQLPAPKAAELANLINNCMDYEPDHRPS 262 (289)
T ss_dssp HHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT------TCCCCCCSSCTTHHHHHHHSCSSGGGSCC
T ss_pred hCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhc------cCCCCCCCCHHHHHHHHHHcCCChhHCcC
Confidence 987 66899999999999999999976655443222111111111 11233344567899999999999999999
Q ss_pred HHHHHHHhcccccCCCC
Q 019495 152 PKSLVTALSPLQKETEV 168 (340)
Q Consensus 152 ~~~i~~~L~~~~~~~~~ 168 (340)
+.++++.|+.+......
T Consensus 263 ~~~ll~~l~~l~~p~~~ 279 (289)
T 4fvq_A 263 FRAIIRDLNSLFTPDLV 279 (289)
T ss_dssp HHHHHHHHHTCC-----
T ss_pred HHHHHHHHHHhcCCCCC
Confidence 99999999998665443
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-31 Score=240.37 Aligned_cols=163 Identities=20% Similarity=0.224 Sum_probs=126.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC--CeEEeccCCCccCCCC-----------CccccCCcc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG--NPRLSTFGLMKNSRDG-----------KSYSTNLAF 67 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~--~~kl~dfg~~~~~~~~-----------~~~~~~~~y 67 (340)
+++.+++.++.||+.||.|||+++ |+||||||+||+++.++ .+||+|||+++..... ....+|+.|
T Consensus 148 ~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y 226 (345)
T 2v62_A 148 FKKSTVLQLGIRMLDVLEYIHENE-YVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEF 226 (345)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccc
Confidence 578899999999999999999999 99999999999998777 9999999999765321 234678999
Q ss_pred cCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHH-----hhhhhccccccccCCCCCchhHHHHHHHHHHhh
Q 019495 68 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI-----RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 142 (340)
Q Consensus 68 ~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 142 (340)
+|||++.+..++.++|||||||++|||++|+.||........ .......+............++..+.+++.+||
T Consensus 227 ~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 306 (345)
T 2v62_A 227 TSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAH 306 (345)
T ss_dssp CCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHH
T ss_pred cCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHh
Confidence 999999988899999999999999999999999854211111 111111111100000001145578999999999
Q ss_pred ccCCCCCCCHHHHHHHhccccc
Q 019495 143 QYEPRERPNPKSLVTALSPLQK 164 (340)
Q Consensus 143 ~~~p~~Rps~~~i~~~L~~~~~ 164 (340)
+.||++||++.+|++.|+.+..
T Consensus 307 ~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 307 SLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp TCCTTCCCCHHHHHHHHCTTCC
T ss_pred hcCcccCCCHHHHHHHHhccCC
Confidence 9999999999999999998754
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=239.70 Aligned_cols=159 Identities=15% Similarity=0.231 Sum_probs=129.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++..++.|+.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...+|+.|+|||++.
T Consensus 114 ~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~ 192 (327)
T 3poz_A 114 IGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192 (327)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhc
Confidence 467889999999999999999999 9999999999999999999999999987654332 223577899999999
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++|||||||++|||++ |+.||.......+.... ........+..++..+.+++.+||+.||++||++.
T Consensus 193 ~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 267 (327)
T 3poz_A 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 267 (327)
T ss_dssp HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH-----HTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHH
T ss_pred cCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHH-----HcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHH
Confidence 8889999999999999999999 88888654333222111 11112234555678999999999999999999999
Q ss_pred HHHHHhcccccC
Q 019495 154 SLVTALSPLQKE 165 (340)
Q Consensus 154 ~i~~~L~~~~~~ 165 (340)
+++..|+.+...
T Consensus 268 ell~~l~~~~~~ 279 (327)
T 3poz_A 268 ELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHHHHTS
T ss_pred HHHHHHHHHHhh
Confidence 999999887654
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-31 Score=238.22 Aligned_cols=164 Identities=14% Similarity=0.226 Sum_probs=125.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhC----------CCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSK----------GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTN 64 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~----------~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~ 64 (340)
++|..+..++.||+.||.|||+. + |+||||||+||+++.++.+||+|||+++..... ....+|
T Consensus 118 ~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~-ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt 196 (322)
T 3soc_A 118 VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA-ISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGT 196 (322)
T ss_dssp BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE-EECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhccccccccCCC-EEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccC
Confidence 47889999999999999999999 8 999999999999999999999999999754332 234689
Q ss_pred CcccCcccccCC-----CCCCCcceehHHHHHHHHhhCCCCCCcchh----------------HHHhhhhhccccccccC
Q 019495 65 LAFTPPEYLRTG-----RVTPESVIYSFGTLLLDLLSGKHIPPSHAL----------------DLIRDRNLQMLTDSCLE 123 (340)
Q Consensus 65 ~~y~aPE~~~~~-----~~~~~~Di~s~G~il~el~~g~~~~~~~~~----------------~~~~~~~~~~~~~~~~~ 123 (340)
+.|+|||++.+. .++.++|||||||++|||+||+.||.+... ..+..........+...
T Consensus 197 ~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (322)
T 3soc_A 197 RRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLR 276 (322)
T ss_dssp GGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCC
T ss_pred ccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCcc
Confidence 999999999863 456788999999999999999988854211 00111111111111111
Q ss_pred CC-CCchhHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccccC
Q 019495 124 GQ-FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 165 (340)
Q Consensus 124 ~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 165 (340)
.. ....++..+.+++.+||+.||++|||+.+|++.|+.+.+.
T Consensus 277 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 277 DYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp GGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 11 1223567799999999999999999999999999887543
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.3e-31 Score=236.01 Aligned_cols=164 Identities=16% Similarity=0.223 Sum_probs=127.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCC-----eEEeccCCCccCCCC-----------CccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN-----PRLSTFGLMKNSRDG-----------KSYSTN 64 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~-----~kl~dfg~~~~~~~~-----------~~~~~~ 64 (340)
+++.+++.++.||+.||.|||+.+ |+||||||+||+++.++. +||+|||+++..... ....||
T Consensus 102 ~~~~~~~~i~~qi~~~l~~LH~~~-iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt 180 (330)
T 2izr_A 102 FSLKTVLMIAIQLISRMEYVHSKN-LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGT 180 (330)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCC
Confidence 578899999999999999999999 999999999999998887 999999999864332 245689
Q ss_pred CcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhh--hhccccccccCCCCCchhHHHHHHHHHHhh
Q 019495 65 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR--NLQMLTDSCLEGQFTDDDGTELVRLASRCL 142 (340)
Q Consensus 65 ~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 142 (340)
+.|+|||++.+..++.++|||||||++|||++|+.||........... .+................+ .+.+++..||
T Consensus 181 ~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l 259 (330)
T 2izr_A 181 ARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVR 259 (330)
T ss_dssp TTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHH
T ss_pred ccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHHH
Confidence 999999999988899999999999999999999999875321111000 0000000000000111234 8999999999
Q ss_pred ccCCCCCCCHHHHHHHhcccccCC
Q 019495 143 QYEPRERPNPKSLVTALSPLQKET 166 (340)
Q Consensus 143 ~~~p~~Rps~~~i~~~L~~~~~~~ 166 (340)
+.||.+||++.+|++.|+.+....
T Consensus 260 ~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 260 RLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp HCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred hCCCCCCCCHHHHHHHHHHHHHHc
Confidence 999999999999999998776544
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-31 Score=236.24 Aligned_cols=161 Identities=19% Similarity=0.250 Sum_probs=130.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-------ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~y~aPE~~ 73 (340)
+++.+++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...+|+.|+|||++
T Consensus 148 ~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~ 226 (325)
T 3kul_A 148 FTIMQLVGMLRGVGAGMRYLSDLG-YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAI 226 (325)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHh
Confidence 467889999999999999999999 9999999999999999999999999998754332 12346689999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.+..++.++||||||+++|+|++ |..||.......+....... .....+..++..+.+++.+||+.||++|||+
T Consensus 227 ~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~ 301 (325)
T 3kul_A 227 AFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG-----YRLPAPMGCPHALHQLMLDCWHKDRAQRPRF 301 (325)
T ss_dssp HHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred cCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC-----CCCCCCCCcCHHHHHHHHHHccCChhhCcCH
Confidence 88889999999999999999999 88888765443332222211 1223455667899999999999999999999
Q ss_pred HHHHHHhcccccCCC
Q 019495 153 KSLVTALSPLQKETE 167 (340)
Q Consensus 153 ~~i~~~L~~~~~~~~ 167 (340)
.+|++.|+.+.....
T Consensus 302 ~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 302 SQIVSVLDALIRSPE 316 (325)
T ss_dssp HHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHhCcc
Confidence 999999999876543
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=229.91 Aligned_cols=164 Identities=15% Similarity=0.217 Sum_probs=129.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-----CccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~ 75 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....||+.|+|||++.+
T Consensus 108 ~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 186 (294)
T 4eqm_A 108 LSVDTAINFTNQILDGIKHAHDMR-IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKG 186 (294)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCSSSTTC-------------CCSSCCHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCccccCccccCHhHhcC
Confidence 478889999999999999999999 999999999999999999999999998765433 23458999999999998
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC-CHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP-NPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-s~~~ 154 (340)
..++.++||||||+++|+|++|+.||.................+. .....+..++..+.+++.+||+.||.+|| ++++
T Consensus 187 ~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~ 265 (294)
T 4eqm_A 187 EATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPN-VTTDVRKDIPQSLSNVILRATEKDKANRYKTIQE 265 (294)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCC-HHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHH
T ss_pred CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCC-cchhcccCCCHHHHHHHHHHhcCCHhHccccHHH
Confidence 889999999999999999999999997765443322222221111 11123344568899999999999999998 8999
Q ss_pred HHHHhcccccCC
Q 019495 155 LVTALSPLQKET 166 (340)
Q Consensus 155 i~~~L~~~~~~~ 166 (340)
+.+.|..+....
T Consensus 266 l~~~l~~~~~~~ 277 (294)
T 4eqm_A 266 MKDDLSSVLHEN 277 (294)
T ss_dssp HHHHHHTSSSSS
T ss_pred HHHHHHHHHhhc
Confidence 999998875544
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=231.08 Aligned_cols=156 Identities=13% Similarity=0.199 Sum_probs=124.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC---ccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~~~ 77 (340)
+++.++..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...+|+.|+|||++.+..
T Consensus 117 ~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 195 (308)
T 3g33_A 117 LPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQST 195 (308)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEEeeCccccccCCCcccCCccccccccCchHHcCCC
Confidence 478889999999999999999999 9999999999999999999999999997655432 346799999999998888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccc---c-----------ccCC-------CCCchhHHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD---S-----------CLEG-------QFTDDDGTELVR 136 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~---~-----------~~~~-------~~~~~~~~~l~~ 136 (340)
++.++|||||||++|+|++|+.||.................. . .+.. ......+..+.+
T Consensus 196 ~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (308)
T 3g33_A 196 YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQ 275 (308)
T ss_dssp CCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHH
T ss_pred CCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHH
Confidence 999999999999999999999998765433322221111000 0 0000 011235678999
Q ss_pred HHHHhhccCCCCCCCHHHHHH
Q 019495 137 LASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 137 li~~cl~~~p~~Rps~~~i~~ 157 (340)
++.+||+.||++|||+.++++
T Consensus 276 li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 276 LLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHhcCCCccCCCHHHHhc
Confidence 999999999999999999985
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-31 Score=234.98 Aligned_cols=147 Identities=20% Similarity=0.291 Sum_probs=119.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
++|..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....||+.|+|||++.+ .
T Consensus 154 l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~ 231 (311)
T 3p1a_A 154 LPEAQVWGYLRDTLLALAHLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG-S 231 (311)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECGGGCEEECCCTTCEECC------CCCCCGGGCCGGGGGT-C
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEccceeeeecccCCCCcccCCCccccCHhHhcC-C
Confidence 578899999999999999999999 999999999999999999999999998765443 23468999999999885 7
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchh-HHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
++.++|||||||++|||++|..+|..... ..+.. . .....++..++..+.+++.+||+.||++|||+.+++
T Consensus 232 ~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell 303 (311)
T 3p1a_A 232 YGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQ----G----YLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALL 303 (311)
T ss_dssp CSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTT----T----CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhc----c----CCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 89999999999999999999876654321 11111 1 111122334568899999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
+
T Consensus 304 ~ 304 (311)
T 3p1a_A 304 A 304 (311)
T ss_dssp T
T ss_pred h
Confidence 5
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.9e-31 Score=238.93 Aligned_cols=160 Identities=23% Similarity=0.316 Sum_probs=132.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
+++.+++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||++.
T Consensus 188 l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~ 266 (382)
T 3tt0_A 188 LSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF 266 (382)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhc
Confidence 478899999999999999999999 999999999999999999999999999865432 2234577899999999
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++|||||||++|+|++ |..||.......+...... ......+..++..+.+++.+||+.||++|||+.
T Consensus 267 ~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ 341 (382)
T 3tt0_A 267 DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE-----GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK 341 (382)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT-----TCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCccCCHHHHHHHHHHcCCChhhCcCHH
Confidence 8889999999999999999999 8888876544333222211 112234556678999999999999999999999
Q ss_pred HHHHHhcccccCC
Q 019495 154 SLVTALSPLQKET 166 (340)
Q Consensus 154 ~i~~~L~~~~~~~ 166 (340)
+|++.|+.+....
T Consensus 342 ell~~L~~~~~~~ 354 (382)
T 3tt0_A 342 QLVEDLDRIVALT 354 (382)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHH
Confidence 9999999886543
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-31 Score=233.73 Aligned_cols=162 Identities=15% Similarity=0.173 Sum_probs=129.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEe---cCCCCeEEeccCCCccCCCC-----------CccccCCc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDG-----------KSYSTNLA 66 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill---~~~~~~kl~dfg~~~~~~~~-----------~~~~~~~~ 66 (340)
+++..+..++.||+.||.|||+++ |+||||||+||++ +.++.+||+|||+++..... ....+|+.
T Consensus 102 ~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~ 180 (296)
T 3uzp_A 102 FSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTAR 180 (296)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccc
Confidence 478889999999999999999999 9999999999999 48889999999998765433 23467899
Q ss_pred ccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchh-------HHHhhhhhccccccccCCCCCchhHHHHHHHHH
Q 019495 67 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-------DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 139 (340)
Q Consensus 67 y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 139 (340)
|+|||++.+..++.++||||||+++|+|++|+.||..... ..+....... ..+ ..+..++..+.+++.
T Consensus 181 y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~l~~li~ 255 (296)
T 3uzp_A 181 YASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-PIE----VLCKGYPSEFATYLN 255 (296)
T ss_dssp TCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-CHH----HHTTTSCHHHHHHHH
T ss_pred cCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCC-chH----HHHhhCCHHHHHHHH
Confidence 9999999988899999999999999999999999865211 1111111110 000 112344578999999
Q ss_pred HhhccCCCCCCCHHHHHHHhcccccCCCC
Q 019495 140 RCLQYEPRERPNPKSLVTALSPLQKETEV 168 (340)
Q Consensus 140 ~cl~~~p~~Rps~~~i~~~L~~~~~~~~~ 168 (340)
+||+.||++||++.+|++.|+.+......
T Consensus 256 ~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 284 (296)
T 3uzp_A 256 FCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp HHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999988766543
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-31 Score=242.38 Aligned_cols=150 Identities=14% Similarity=0.111 Sum_probs=118.9
Q ss_pred HHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-ccccCCcccCcccccC--CCCCCCcc
Q 019495 7 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-SYSTNLAFTPPEYLRT--GRVTPESV 83 (340)
Q Consensus 7 ~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-~~~~~~~y~aPE~~~~--~~~~~~~D 83 (340)
+.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++...... ...+|+.|+|||++.+ ..++.++|
T Consensus 197 ~~i~~qi~~aL~~LH~~~-ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~D 275 (371)
T 3q60_A 197 HILTAQLIRLAANLQSKG-LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALN 275 (371)
T ss_dssp HHHHHHHHHHHHHHHHTT-EEETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHH
T ss_pred HHHHHHHHHHHHHHHHCC-CccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCcccc
Confidence 778899999999999999 9999999999999999999999999998776554 4567799999999987 57899999
Q ss_pred eehHHHHHHHHhhCCCCCCcchhHHHhhhh---hccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 84 IYSFGTLLLDLLSGKHIPPSHALDLIRDRN---LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 84 i~s~G~il~el~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
||||||++|+|++|+.||............ ................++..+.++|.+||+.||++|||+.++++
T Consensus 276 iwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 276 AWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp HHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred HHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 999999999999999998765322111000 00001111111222456789999999999999999999999874
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=243.68 Aligned_cols=160 Identities=21% Similarity=0.326 Sum_probs=131.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-----CccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~ 75 (340)
+++...+.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+++.|+|||++.+
T Consensus 281 ~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 359 (454)
T 1qcf_A 281 QPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINF 359 (454)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhcc
Confidence 467788999999999999999999 999999999999999999999999999865432 22345678999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+.++.++|||||||++|||+| |+.||.......+...... ......+..++..+.++|.+||+.||++|||+.+
T Consensus 360 ~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~ 434 (454)
T 1qcf_A 360 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER-----GYRMPRPENCPEELYNIMMRCWKNRPEERPTFEY 434 (454)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHH-----TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHH
Confidence 889999999999999999999 8888876544333222111 1222345567789999999999999999999999
Q ss_pred HHHHhcccccCC
Q 019495 155 LVTALSPLQKET 166 (340)
Q Consensus 155 i~~~L~~~~~~~ 166 (340)
|+..|+.+....
T Consensus 435 i~~~L~~~~~~~ 446 (454)
T 1qcf_A 435 IQSVLDDFYTAT 446 (454)
T ss_dssp HHHHHHTSSSSS
T ss_pred HHHHHHHHHhcc
Confidence 999999986543
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-31 Score=232.52 Aligned_cols=161 Identities=15% Similarity=0.167 Sum_probs=128.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEe---cCCCCeEEeccCCCccCCCC-----------CccccCCc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDG-----------KSYSTNLA 66 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill---~~~~~~kl~dfg~~~~~~~~-----------~~~~~~~~ 66 (340)
+++..+..++.||+.||.|||+++ |+||||||+||++ +.++.+||+|||+++..... ....+|+.
T Consensus 102 ~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~ 180 (296)
T 4hgt_A 102 FSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTAR 180 (296)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCcc
Confidence 578899999999999999999999 9999999999999 78899999999998865432 23467899
Q ss_pred ccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhH-------HHhhhhhccccccccCCCCCchhHHHHHHHHH
Q 019495 67 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-------LIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 139 (340)
Q Consensus 67 y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 139 (340)
|+|||++.+..++.++|||||||++|+|++|+.||...... .+....... ... .....++..+.+++.
T Consensus 181 y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~l~~li~ 255 (296)
T 4hgt_A 181 YASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-PIE----VLCKGYPSEFATYLN 255 (296)
T ss_dssp GCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-CHH----HHTTTSCHHHHHHHH
T ss_pred ccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc-hhh----hhhccCCHHHHHHHH
Confidence 99999999888999999999999999999999998653211 111111000 000 111234578999999
Q ss_pred HhhccCCCCCCCHHHHHHHhcccccCCC
Q 019495 140 RCLQYEPRERPNPKSLVTALSPLQKETE 167 (340)
Q Consensus 140 ~cl~~~p~~Rps~~~i~~~L~~~~~~~~ 167 (340)
+||+.||++|||+.++++.|+.+.....
T Consensus 256 ~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 256 FCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp HHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 9999999999999999999998876543
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-31 Score=242.40 Aligned_cols=158 Identities=28% Similarity=0.414 Sum_probs=128.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++.+.+.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...++..|+|||++.
T Consensus 210 ~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 288 (377)
T 3cbl_A 210 LRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALN 288 (377)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhc
Confidence 467889999999999999999999 9999999999999999999999999988654331 122466799999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
++.++.++|||||||++|||++ |..||............ ........+..++..+.++|.+||+.||++|||+.
T Consensus 289 ~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 363 (377)
T 3cbl_A 289 YGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV-----EKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFS 363 (377)
T ss_dssp HCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHH-----HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-----HcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHH
Confidence 8889999999999999999998 88888765433222211 11122234556678999999999999999999999
Q ss_pred HHHHHhccccc
Q 019495 154 SLVTALSPLQK 164 (340)
Q Consensus 154 ~i~~~L~~~~~ 164 (340)
+|++.|+.+.+
T Consensus 364 ~i~~~L~~i~~ 374 (377)
T 3cbl_A 364 TIYQELQSIRK 374 (377)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999987753
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.8e-31 Score=235.13 Aligned_cols=150 Identities=21% Similarity=0.282 Sum_probs=123.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.+...++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++...... ....||+.|+|||++.+..
T Consensus 105 l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 183 (336)
T 3h4j_B 105 MTEDEGRRFFQQIICAIEYCHRHK-IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKL 183 (336)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHT-CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCSG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eEecCCchhhEEEcCCCCEEEEEeccceeccCCcccccccCCcCcCCHHHHcCCC
Confidence 467889999999999999999999 999999999999999999999999998865544 3456899999999998766
Q ss_pred C-CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 78 V-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 78 ~-~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
+ +.++|||||||++|+|++|+.||.......+.. .+.. .....+...++.+.+++.+||+.||.+|||+.+++
T Consensus 184 ~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~----~i~~--~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil 257 (336)
T 3h4j_B 184 YAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK----KVNS--CVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIR 257 (336)
T ss_dssp GGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC----CCCS--SCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHT
T ss_pred CCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH----HHHc--CCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 5 689999999999999999999986543222111 1111 11234555678999999999999999999999997
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
+
T Consensus 258 ~ 258 (336)
T 3h4j_B 258 R 258 (336)
T ss_dssp T
T ss_pred h
Confidence 5
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=6.3e-31 Score=239.33 Aligned_cols=160 Identities=21% Similarity=0.269 Sum_probs=121.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc-------cccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-------YSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~-------~~~~~~y~aPE~~ 73 (340)
+++.+++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++....... ..+++.|+|||++
T Consensus 144 ~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 222 (373)
T 2qol_A 144 FTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222 (373)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC----------------------CTTSCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhh
Confidence 468889999999999999999999 99999999999999999999999999886543321 1236789999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.+..++.++||||||+++|||++ |+.||.......+...... ......+..++..+.+++.+||+.||.+||++
T Consensus 223 ~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~ 297 (373)
T 2qol_A 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE-----GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKF 297 (373)
T ss_dssp HHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHT-----TEECCCCTTCBHHHHHHHHHHTCSSGGGSCCH
T ss_pred ccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCccccHHHHHHHHHHhCcChhhCcCH
Confidence 98889999999999999999998 8888866544332222111 11223344567899999999999999999999
Q ss_pred HHHHHHhcccccCC
Q 019495 153 KSLVTALSPLQKET 166 (340)
Q Consensus 153 ~~i~~~L~~~~~~~ 166 (340)
.+|++.|+.+....
T Consensus 298 ~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 298 EQIVSILDKLIRNP 311 (373)
T ss_dssp HHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHhCc
Confidence 99999999886653
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=234.58 Aligned_cols=152 Identities=20% Similarity=0.207 Sum_probs=125.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCccccCCcccCccccc---CCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLR---TGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~---~~~ 77 (340)
+++.++..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++.........+|+.|+|||++. ++.
T Consensus 151 l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 229 (348)
T 1u5q_A 151 LQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQ 229 (348)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCGGGCCHHHHHTTSSCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcccCCcceeCHhhhccccCCC
Confidence 478889999999999999999999 9999999999999999999999999998877777788999999999984 467
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
++.++|||||||++|||++|+.||................ .....+...+..+.+++.+||+.||++|||+.++++
T Consensus 230 ~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 230 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE----SPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC----CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC----CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 8999999999999999999999886643322211111111 111123345678999999999999999999999975
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-31 Score=238.95 Aligned_cols=159 Identities=25% Similarity=0.348 Sum_probs=128.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++...+.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...+|+.|+|||++.
T Consensus 190 l~~~~~~~~~~ql~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~ 268 (359)
T 3vhe_A 190 LTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 268 (359)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhc
Confidence 467889999999999999999999 9999999999999999999999999987653322 235678899999999
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++||||||+++|+|++ |..||............... ......+..+++.+.+++.+||+.||.+|||+.
T Consensus 269 ~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ 344 (359)
T 3vhe_A 269 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE----GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 344 (359)
T ss_dssp HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHH----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHc----CCCCCCCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence 8889999999999999999998 99888664322211111111 112234455668899999999999999999999
Q ss_pred HHHHHhccccc
Q 019495 154 SLVTALSPLQK 164 (340)
Q Consensus 154 ~i~~~L~~~~~ 164 (340)
++++.|+.+..
T Consensus 345 ell~~L~~~~~ 355 (359)
T 3vhe_A 345 ELVEHLGNLLQ 355 (359)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999987753
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-31 Score=232.03 Aligned_cols=164 Identities=20% Similarity=0.312 Sum_probs=127.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-------ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~y~aPE~~ 73 (340)
+++.+++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++...... ...++..|+|||++
T Consensus 111 ~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 189 (295)
T 3ugc_A 111 IDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189 (295)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHh
Confidence 467889999999999999999999 9999999999999999999999999998654332 22356679999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhh-----------hhccccccccCCCCCchhHHHHHHHHHHhh
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR-----------NLQMLTDSCLEGQFTDDDGTELVRLASRCL 142 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 142 (340)
.+..++.++||||||+++|+|++|..|+........... ..............+..++..+.+++.+||
T Consensus 190 ~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 269 (295)
T 3ugc_A 190 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECW 269 (295)
T ss_dssp HHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHS
T ss_pred cCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHc
Confidence 988899999999999999999999987754322211100 011111112233345667789999999999
Q ss_pred ccCCCCCCCHHHHHHHhcccccC
Q 019495 143 QYEPRERPNPKSLVTALSPLQKE 165 (340)
Q Consensus 143 ~~~p~~Rps~~~i~~~L~~~~~~ 165 (340)
+.||++|||+.++++.|+.+...
T Consensus 270 ~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 270 NNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp CSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCChhhCCCHHHHHHHHHHHHHh
Confidence 99999999999999999887554
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.8e-31 Score=236.78 Aligned_cols=150 Identities=19% Similarity=0.287 Sum_probs=122.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC----CCccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.... ..+..||+.|+|||++.+.
T Consensus 121 ~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 199 (353)
T 3txo_A 121 FDEARARFYAAEIISALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEM 199 (353)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---------CCGGGCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-CcccCCCHHHEEECCCCCEEEccccceeecccCCccccccCCCcCeEChhhcCCC
Confidence 467788899999999999999999 99999999999999999999999999885332 2345789999999999888
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH----
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP---- 152 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~---- 152 (340)
.++.++|+|||||++|||++|+.||.......+....... ...++...+..+.+++.+||+.||.+||++
T Consensus 200 ~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~ 273 (353)
T 3txo_A 200 LYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND------EVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQG 273 (353)
T ss_dssp HCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGT
T ss_pred CcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHhhhCHHHccCCcccC
Confidence 8999999999999999999999999876554433332222 123455567889999999999999999998
Q ss_pred --HHHHH
Q 019495 153 --KSLVT 157 (340)
Q Consensus 153 --~~i~~ 157 (340)
.+|+.
T Consensus 274 ~~~~il~ 280 (353)
T 3txo_A 274 GEHAILR 280 (353)
T ss_dssp CTHHHHT
T ss_pred CHHHHhh
Confidence 66764
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-30 Score=225.22 Aligned_cols=159 Identities=18% Similarity=0.282 Sum_probs=128.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
+++.++..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||++....... ...+++.|+|||++.+
T Consensus 101 ~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 179 (268)
T 3sxs_A 101 LEPSQLLEMCYDVCEGMAFLESHQ-FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHY 179 (268)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhc
Confidence 478889999999999999999999 9999999999999999999999999987654432 2234667999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
..++.++||||||+++|+|++ |..||............... .....+...+..+.+++.+||+.||++|||+.+
T Consensus 180 ~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ 254 (268)
T 3sxs_A 180 FKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQG-----HRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQ 254 (268)
T ss_dssp SEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-----CCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHH
T ss_pred cCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcC-----CCCCCCCcChHHHHHHHHHHcCCChhhCcCHHH
Confidence 889999999999999999999 88887654333222221111 111233445678999999999999999999999
Q ss_pred HHHHhcccccC
Q 019495 155 LVTALSPLQKE 165 (340)
Q Consensus 155 i~~~L~~~~~~ 165 (340)
+++.|+.+...
T Consensus 255 ll~~L~~l~~~ 265 (268)
T 3sxs_A 255 LLSSIEPLREK 265 (268)
T ss_dssp HHHHHGGGCC-
T ss_pred HHHHHHHhhhc
Confidence 99999988654
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-30 Score=233.48 Aligned_cols=150 Identities=19% Similarity=0.320 Sum_probs=124.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC----CCccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.+|.+||+|||+++.... .....||+.|+|||++.+.
T Consensus 118 ~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 196 (353)
T 2i0e_A 118 FKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQ 196 (353)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcccccccCCccccChhhhcCC
Confidence 467788999999999999999999 99999999999999999999999999876322 2345789999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC-----
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN----- 151 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps----- 151 (340)
.++.++|+|||||++|||++|+.||.......+....... ...+|...+..+.+++.+||..||.+||+
T Consensus 197 ~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~ 270 (353)
T 2i0e_A 197 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEG 270 (353)
T ss_dssp CBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTH
T ss_pred CcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCC
Confidence 8999999999999999999999999776544333322221 12345566789999999999999999996
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.+|+.
T Consensus 271 ~~~i~~ 276 (353)
T 2i0e_A 271 ERDIKE 276 (353)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 466654
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-30 Score=243.72 Aligned_cols=159 Identities=24% Similarity=0.365 Sum_probs=129.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-ccccCCcccCcccccCCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-SYSTNLAFTPPEYLRTGRVT 79 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~ 79 (340)
+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...++..|+|||++.+..++
T Consensus 286 ~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 364 (450)
T 1k9a_A 286 LGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFS 364 (450)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTSCEEECCCTTCEECC------CCCTTTSCHHHHHSSCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCCCcceeCHHHhcCCCCC
Confidence 467889999999999999999999 9999999999999999999999999998654332 33567899999999988899
Q ss_pred CCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 019495 80 PESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 158 (340)
Q Consensus 80 ~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 158 (340)
.++||||||+++|||++ |+.||............. .......+..++..+.++|.+||+.||++|||+.++++.
T Consensus 365 ~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~-----~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~ 439 (450)
T 1k9a_A 365 TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-----KGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQ 439 (450)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHH-----TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-----cCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 99999999999999998 988886543322211111 112234566678899999999999999999999999999
Q ss_pred hcccccC
Q 019495 159 LSPLQKE 165 (340)
Q Consensus 159 L~~~~~~ 165 (340)
|+.+...
T Consensus 440 L~~i~~~ 446 (450)
T 1k9a_A 440 LEHIRTH 446 (450)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9887543
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-30 Score=229.14 Aligned_cols=150 Identities=22% Similarity=0.291 Sum_probs=125.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-CccccCCcccCcccccCCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVT 79 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~ 79 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.+|.+||+|||+++..... .+..||+.|+|||++.+..++
T Consensus 103 ~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 181 (318)
T 1fot_A 103 FPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYN 181 (318)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChheEEEcCCCCEEEeecCcceecCCccccccCCccccCHhHhcCCCCC
Confidence 467788899999999999999999 999999999999999999999999999876543 356789999999999988899
Q ss_pred CCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC-----CHHH
Q 019495 80 PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP-----NPKS 154 (340)
Q Consensus 80 ~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s~~~ 154 (340)
.++|+|||||++|||++|..||............... ...++...+..+.+++.+||..||.+|| ++.+
T Consensus 182 ~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~ 255 (318)
T 1fot_A 182 KSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA------ELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTED 255 (318)
T ss_dssp TTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHH
T ss_pred cccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHH
Confidence 9999999999999999999999765443332222221 1234555678999999999999999999 8888
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
++.
T Consensus 256 i~~ 258 (318)
T 1fot_A 256 VKN 258 (318)
T ss_dssp HHT
T ss_pred Hhc
Confidence 874
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-30 Score=242.68 Aligned_cols=161 Identities=25% Similarity=0.333 Sum_probs=128.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
+++.+++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...++..|+|||++.+
T Consensus 277 ~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 355 (452)
T 1fmk_A 277 LRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 355 (452)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcccccccCHhHHhc
Confidence 467889999999999999999999 9999999999999999999999999998654322 2235678999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+.++.++||||||+++|||++ |+.||.............. ......+..++..+.++|.+||+.||++|||+.+
T Consensus 356 ~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~ 430 (452)
T 1fmk_A 356 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-----GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEY 430 (452)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-----TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHH
Confidence 889999999999999999999 8888876543332222111 1222345567789999999999999999999999
Q ss_pred HHHHhcccccCCC
Q 019495 155 LVTALSPLQKETE 167 (340)
Q Consensus 155 i~~~L~~~~~~~~ 167 (340)
+++.|+.+.....
T Consensus 431 l~~~L~~~~~~~~ 443 (452)
T 1fmk_A 431 LQAFLEDYFTSTE 443 (452)
T ss_dssp HHHHHHTTTSCSC
T ss_pred HHHHHHHHhccCC
Confidence 9999999876544
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.2e-31 Score=234.50 Aligned_cols=159 Identities=15% Similarity=0.221 Sum_probs=125.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...+|+.|+|||++.
T Consensus 114 ~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~ 192 (327)
T 3lzb_A 114 IGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192 (327)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTC----------------CCCGGGSCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCC-CcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHc
Confidence 467889999999999999999999 9999999999999999999999999997654322 223567899999999
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++||||||+++|+|++ |..||.......+..... .......+..++..+.+++.+||+.||.+||++.
T Consensus 193 ~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ 267 (327)
T 3lzb_A 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-----KGERLPQPPICTIDVYMIMRKCWMIDADSRPKFR 267 (327)
T ss_dssp HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-----TTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-----cCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHH
Confidence 8889999999999999999999 888886543332222111 1112234555678899999999999999999999
Q ss_pred HHHHHhcccccC
Q 019495 154 SLVTALSPLQKE 165 (340)
Q Consensus 154 ~i~~~L~~~~~~ 165 (340)
++++.|..+...
T Consensus 268 ell~~L~~~~~~ 279 (327)
T 3lzb_A 268 ELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHHHHTS
T ss_pred HHHHHHHHHHhC
Confidence 999999988654
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.2e-31 Score=240.09 Aligned_cols=160 Identities=21% Similarity=0.319 Sum_probs=129.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC---CeEEeccCCCccC------CCCCccccCCcccCcc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG---NPRLSTFGLMKNS------RDGKSYSTNLAFTPPE 71 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~---~~kl~dfg~~~~~------~~~~~~~~~~~y~aPE 71 (340)
+++..++.++.||+.||.|||+++ |+||||||+||+++.+| .+||+|||+++.. .......+|+.|+|||
T Consensus 178 ~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE 256 (367)
T 3l9p_A 178 LAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPE 256 (367)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHH
Confidence 467889999999999999999999 99999999999998555 4999999998743 1223345688999999
Q ss_pred cccCCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC
Q 019495 72 YLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150 (340)
Q Consensus 72 ~~~~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 150 (340)
++.+..++.++|||||||++|||++ |..||.......+....... .....+..++..+.+++.+||+.||++||
T Consensus 257 ~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~li~~~l~~dP~~Rp 331 (367)
T 3l9p_A 257 AFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG-----GRMDPPKNCPGPVYRIMTQCWQHQPEDRP 331 (367)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred HhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCccCCHHHHHHHHHHcCCCHhHCc
Confidence 9988889999999999999999998 88888765443332222111 12233455678899999999999999999
Q ss_pred CHHHHHHHhcccccCC
Q 019495 151 NPKSLVTALSPLQKET 166 (340)
Q Consensus 151 s~~~i~~~L~~~~~~~ 166 (340)
++.+|++.|+.+....
T Consensus 332 s~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 332 NFAIILERIEYCTQDP 347 (367)
T ss_dssp CHHHHHHHHHHHHHCH
T ss_pred CHHHHHHHHHHHhhCh
Confidence 9999999998886654
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-30 Score=239.55 Aligned_cols=156 Identities=16% Similarity=0.190 Sum_probs=118.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC---CCCeEEeccCCCccCCCC---CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~---~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~ 74 (340)
+++.++..|+.||+.||.|||+.+ |+||||||+||+++. ++.+||+|||+++..... ....+|+.|+|||++.
T Consensus 158 l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~ 236 (400)
T 1nxk_A 158 FTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG 236 (400)
T ss_dssp CBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----------CTTCCGGGSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCcceEEEecCCCCccEEEEecccccccCCCCccccCCCCCCccCHhhcC
Confidence 467889999999999999999999 999999999999987 788999999999865543 3456799999999999
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccc--ccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS--CLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
+..++.++|||||||++|+|++|+.||...............+... .+.......++..+.++|.+||+.||++|||+
T Consensus 237 ~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~ 316 (400)
T 1nxk_A 237 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI 316 (400)
T ss_dssp CCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCH
T ss_pred CCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCH
Confidence 8889999999999999999999999986542211100000000000 01111123456889999999999999999999
Q ss_pred HHHHH
Q 019495 153 KSLVT 157 (340)
Q Consensus 153 ~~i~~ 157 (340)
.+++.
T Consensus 317 ~eil~ 321 (400)
T 1nxk_A 317 TEFMN 321 (400)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99986
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-30 Score=226.08 Aligned_cols=152 Identities=18% Similarity=0.232 Sum_probs=122.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||++.+.
T Consensus 134 ~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 212 (298)
T 2zv2_A 134 LSEDQARFYFQDLIKGIEYLHYQK-IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSET 212 (298)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccC
Confidence 578889999999999999999999 999999999999999999999999999865543 234689999999999865
Q ss_pred C---CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 77 R---VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 77 ~---~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
. .+.++||||||+++|+|++|+.||.......+....... .........++..+.+++.+||+.||++|||+.
T Consensus 213 ~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~ 288 (298)
T 2zv2_A 213 RKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQ----ALEFPDQPDIAEDLKDLITRMLDKNPESRIVVP 288 (298)
T ss_dssp CCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC----CCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHH
T ss_pred CCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcc----cCCCCCccccCHHHHHHHHHHhhcChhhCCCHH
Confidence 4 377899999999999999999998765443322221111 111112234568899999999999999999999
Q ss_pred HHHH
Q 019495 154 SLVT 157 (340)
Q Consensus 154 ~i~~ 157 (340)
++++
T Consensus 289 e~l~ 292 (298)
T 2zv2_A 289 EIKL 292 (298)
T ss_dssp HHTT
T ss_pred HHhc
Confidence 9874
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-30 Score=234.43 Aligned_cols=167 Identities=16% Similarity=0.143 Sum_probs=130.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC--CeEEeccCCCccCCCC-----------CccccCCcc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG--NPRLSTFGLMKNSRDG-----------KSYSTNLAF 67 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~--~~kl~dfg~~~~~~~~-----------~~~~~~~~y 67 (340)
+++.+++.++.||+.||.|||+++ |+||||||+||+++.++ .+||+|||+++..... ....+|+.|
T Consensus 156 l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y 234 (352)
T 2jii_A 156 LSERSVLQVACRLLDALEFLHENE-YVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEF 234 (352)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccc
Confidence 578899999999999999999999 99999999999999988 8999999998754322 223678999
Q ss_pred cCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcch--hHHHhhhh--hccccccccC-CCCCchhHHHHHHHHHHhh
Q 019495 68 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA--LDLIRDRN--LQMLTDSCLE-GQFTDDDGTELVRLASRCL 142 (340)
Q Consensus 68 ~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~--~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~l~~li~~cl 142 (340)
+|||++.+..++.++||||||+++|+|++|+.||.... ...+.... .......... .......+..+.+++.+||
T Consensus 235 ~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 314 (352)
T 2jii_A 235 ISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVM 314 (352)
T ss_dssp CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHH
T ss_pred cCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHH
Confidence 99999998889999999999999999999999886542 11111111 0110000000 0011234688999999999
Q ss_pred ccCCCCCCCHHHHHHHhcccccCCCC
Q 019495 143 QYEPRERPNPKSLVTALSPLQKETEV 168 (340)
Q Consensus 143 ~~~p~~Rps~~~i~~~L~~~~~~~~~ 168 (340)
+.||++||++.+|++.|+.+......
T Consensus 315 ~~dp~~Rps~~~l~~~L~~~~~~~~~ 340 (352)
T 2jii_A 315 ALTYEEKPPYAMLRNNLEALLQDLRV 340 (352)
T ss_dssp TCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred hCChhhCCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999988766543
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-30 Score=226.67 Aligned_cols=160 Identities=24% Similarity=0.425 Sum_probs=127.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCC-ccccCCCCCCEEecCCCC-----eEEeccCCCccCCCCC-ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGR-ALYHDLNAYRILFDEDGN-----PRLSTFGLMKNSRDGK-SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~-iiH~dlk~~nill~~~~~-----~kl~dfg~~~~~~~~~-~~~~~~~y~aPE~~ 73 (340)
+++..+..++.||+.||.|||+.++ |+||||||+||+++.++. +||+|||+++...... ...+|+.|+|||++
T Consensus 119 ~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~ 198 (287)
T 4f0f_A 119 IKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETI 198 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSCEECCCCCCTTSCGGGS
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccccccccccCCCccccCchhh
Confidence 4788899999999999999999863 999999999999987776 9999999988655442 45689999999999
Q ss_pred c--CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 74 R--TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 74 ~--~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
. ...++.++||||||+++|+|++|+.||........... ............+..+++.+.+++.+||+.||.+|||
T Consensus 199 ~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 276 (287)
T 4f0f_A 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI--NMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPH 276 (287)
T ss_dssp SCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHH--HHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred ccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHH--HHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcC
Confidence 4 34578899999999999999999999865432222111 1111122233455667789999999999999999999
Q ss_pred HHHHHHHhccc
Q 019495 152 PKSLVTALSPL 162 (340)
Q Consensus 152 ~~~i~~~L~~~ 162 (340)
+.++++.|+.+
T Consensus 277 ~~~ll~~L~~l 287 (287)
T 4f0f_A 277 FSYIVKELSEL 287 (287)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHhC
Confidence 99999988753
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-30 Score=232.39 Aligned_cols=162 Identities=17% Similarity=0.241 Sum_probs=125.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhC--------CCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC--------ccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSK--------GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--------SYSTN 64 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~--------~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~--------~~~~~ 64 (340)
+++.+++.++.||+.||.|||++ + |+||||||+||+++.++.+||+|||+++...... ...||
T Consensus 131 ~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt 209 (337)
T 3mdy_A 131 LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGT 209 (337)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-EEecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccC
Confidence 46788999999999999999998 8 9999999999999999999999999987543321 34689
Q ss_pred CcccCcccccCCCCCCC------cceehHHHHHHHHhhC----------CCCCCcchh-----HHHhhhhhccccccccC
Q 019495 65 LAFTPPEYLRTGRVTPE------SVIYSFGTLLLDLLSG----------KHIPPSHAL-----DLIRDRNLQMLTDSCLE 123 (340)
Q Consensus 65 ~~y~aPE~~~~~~~~~~------~Di~s~G~il~el~~g----------~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 123 (340)
+.|+|||++.+...+.. +|||||||++|||++| ..|+..... ......... ....
T Consensus 210 ~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~----~~~~ 285 (337)
T 3mdy_A 210 KRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCI----KKLR 285 (337)
T ss_dssp GGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTT----SCCC
T ss_pred cceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhh----hccC
Confidence 99999999987666555 8999999999999999 555433211 111111111 1111
Q ss_pred CCCC-----chhHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccccCCC
Q 019495 124 GQFT-----DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 167 (340)
Q Consensus 124 ~~~~-----~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~~ 167 (340)
..++ ..++..+.+++.+||+.||++|||+.+|++.|+.+.....
T Consensus 286 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 286 PSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp CCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred ccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 2222 3677889999999999999999999999999998876543
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=9.9e-31 Score=235.29 Aligned_cols=160 Identities=21% Similarity=0.273 Sum_probs=129.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
+++.+++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||++.
T Consensus 171 l~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~ 249 (343)
T 1luf_A 171 LSCAEQLCIARQVAAGMAYLSERK-FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIF 249 (343)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhc
Confidence 467788999999999999999999 999999999999999999999999998754322 2345688899999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++||||||+++|+|++ |..||.......+....... .....+..++..+.+++.+||+.||++||++.
T Consensus 250 ~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ 324 (343)
T 1luf_A 250 YNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDG-----NILACPENCPLELYNLMRLCWSKLPADRPSFC 324 (343)
T ss_dssp HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred cCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCC-----CcCCCCCCCCHHHHHHHHHHcccCcccCCCHH
Confidence 8889999999999999999999 88888765443332221111 11234556678999999999999999999999
Q ss_pred HHHHHhcccccCC
Q 019495 154 SLVTALSPLQKET 166 (340)
Q Consensus 154 ~i~~~L~~~~~~~ 166 (340)
++++.|+.+....
T Consensus 325 ~~~~~L~~~~~~~ 337 (343)
T 1luf_A 325 SIHRILQRMCERA 337 (343)
T ss_dssp HHHHHHHHTTC--
T ss_pred HHHHHHHHHHhhh
Confidence 9999999886554
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-30 Score=227.94 Aligned_cols=162 Identities=17% Similarity=0.274 Sum_probs=122.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHh---CCCccccCCCCCCEEecCCCC-eEEeccCCCccCCCC-CccccCCcccCcccccCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTS---KGRALYHDLNAYRILFDEDGN-PRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~---~~~iiH~dlk~~nill~~~~~-~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~ 76 (340)
++...+.++.||+.||.|||+ ++ |+||||||+||+++.++. +||+|||++...... ....+|+.|+|||++.+.
T Consensus 100 ~~~~~~~~~~qi~~~l~~LH~~~~~~-ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~ 178 (307)
T 2eva_A 100 TAAHAMSWCLQCSQGVAYLHSMQPKA-LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGS 178 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCSSSC-CCCCCCSGGGEEEETTTTEEEECCCCC------------CCTTSSCHHHHTCC
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCCC-eecCCCChhHEEEeCCCCEEEEcccccccccccccccCCCCCceEChhhhCCC
Confidence 567889999999999999999 78 999999999999998887 799999998765433 344689999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++||||||+++|+|++|+.||............ .. ........+..++..+.+++.+||+.||++|||+.+++
T Consensus 179 ~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 255 (307)
T 2eva_A 179 NYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW--AV-HNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIV 255 (307)
T ss_dssp CCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHH--HH-HTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHH--HH-hcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHH
Confidence 8999999999999999999999988643211110000 00 00112233445668899999999999999999999999
Q ss_pred HHhcccccCCC
Q 019495 157 TALSPLQKETE 167 (340)
Q Consensus 157 ~~L~~~~~~~~ 167 (340)
+.|+.+.....
T Consensus 256 ~~L~~~~~~~~ 266 (307)
T 2eva_A 256 KIMTHLMRYFP 266 (307)
T ss_dssp HHHHHHGGGCC
T ss_pred HHHHHHHHhcc
Confidence 99988766543
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-30 Score=228.43 Aligned_cols=162 Identities=23% Similarity=0.280 Sum_probs=128.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--------CccccCCcccCccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--------KSYSTNLAFTPPEY 72 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--------~~~~~~~~y~aPE~ 72 (340)
+++.+++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+++.|+|||.
T Consensus 121 ~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 199 (298)
T 3pls_A 121 PTVKDLISFGLQVARGMEYLAEQK-FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALES 199 (298)
T ss_dssp CBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhh
Confidence 467888999999999999999999 999999999999999999999999998754322 23356788999999
Q ss_pred ccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 73 LRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 73 ~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
+.+..++.++||||||+++|+|++|+.|+............... ......+..++..+.+++.+||+.||.+|||+
T Consensus 200 ~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~ 275 (298)
T 3pls_A 200 LQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQ----GRRLPQPEYCPDSLYQVMQQCWEADPAVRPTF 275 (298)
T ss_dssp HTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHT----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred hccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhc----CCCCCCCccchHHHHHHHHHHccCChhhCcCH
Confidence 99888999999999999999999976665433221111111111 11223344566889999999999999999999
Q ss_pred HHHHHHhcccccCCC
Q 019495 153 KSLVTALSPLQKETE 167 (340)
Q Consensus 153 ~~i~~~L~~~~~~~~ 167 (340)
.++++.|+.+.....
T Consensus 276 ~~ll~~l~~~~~~l~ 290 (298)
T 3pls_A 276 RVLVGEVEQIVSALL 290 (298)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999998876543
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-30 Score=232.77 Aligned_cols=150 Identities=16% Similarity=0.211 Sum_probs=126.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-CccccCCcccCcccccCCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVT 79 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~ 79 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.+|.+||+|||+++..... .+..||+.|+|||++.+..++
T Consensus 138 ~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 216 (350)
T 1rdq_E 138 FSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYN 216 (350)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccccCccceEEECCCCCEEEcccccceeccCCcccccCCccccCHHHhcCCCCC
Confidence 467788999999999999999999 999999999999999999999999999876544 356789999999999988899
Q ss_pred CCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC-----HHH
Q 019495 80 PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN-----PKS 154 (340)
Q Consensus 80 ~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps-----~~~ 154 (340)
.++|+|||||++|+|++|..||.......+....... ...++...+..+.++|.+||+.||.+||+ +.+
T Consensus 217 ~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~e 290 (350)
T 1rdq_E 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG------KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290 (350)
T ss_dssp THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHH
T ss_pred CcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHH
Confidence 9999999999999999999998765443332222221 12345556789999999999999999998 888
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
|+.
T Consensus 291 i~~ 293 (350)
T 1rdq_E 291 IKN 293 (350)
T ss_dssp HHT
T ss_pred HHh
Confidence 875
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.3e-31 Score=229.10 Aligned_cols=158 Identities=22% Similarity=0.321 Sum_probs=119.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...+++.|+|||++.+
T Consensus 113 ~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 191 (281)
T 1mp8_A 113 LDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 191 (281)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHEEECCCCCEEECccccccccCcccccccccCCCcccccChhhccc
Confidence 467889999999999999999999 9999999999999999999999999987654432 2245678999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
..++.++||||||+++|+|++ |..||.............. ......+..++..+.+++.+||+.||++|||+.+
T Consensus 192 ~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ 266 (281)
T 1mp8_A 192 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN-----GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTE 266 (281)
T ss_dssp CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHc-----CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHH
Confidence 889999999999999999997 8878765433222111111 1122345566789999999999999999999999
Q ss_pred HHHHhccccc
Q 019495 155 LVTALSPLQK 164 (340)
Q Consensus 155 i~~~L~~~~~ 164 (340)
+++.|+.+..
T Consensus 267 l~~~l~~~~~ 276 (281)
T 1mp8_A 267 LKAQLSTILE 276 (281)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999987643
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-30 Score=238.70 Aligned_cols=150 Identities=21% Similarity=0.352 Sum_probs=125.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHh-CCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~-~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~ 75 (340)
+++.....++.||+.||.|||+ ++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+|||++.+
T Consensus 245 ~~~~~~~~~~~qi~~aL~~LH~~~g-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~ 323 (446)
T 4ejn_A 245 FSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLED 323 (446)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTC-CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCC-EEECCCCHHHEEECCCCCEEEccCCCceeccCCCcccccccCCccccCHhhcCC
Confidence 4678889999999999999998 88 999999999999999999999999998764322 34578999999999998
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC-----
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP----- 150 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp----- 150 (340)
..++.++|||||||++|||++|+.||.......+....... ...++...++.+.++|.+||+.||.+||
T Consensus 324 ~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~ 397 (446)
T 4ejn_A 324 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------EIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSE 397 (446)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTT
T ss_pred CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHHHHHHHHHcccCHHHhCCCCCC
Confidence 88999999999999999999999999766544333322221 1234555678999999999999999999
Q ss_pred CHHHHHH
Q 019495 151 NPKSLVT 157 (340)
Q Consensus 151 s~~~i~~ 157 (340)
++.++++
T Consensus 398 t~~ell~ 404 (446)
T 4ejn_A 398 DAKEIMQ 404 (446)
T ss_dssp THHHHHT
T ss_pred CHHHHHh
Confidence 9999885
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.2e-31 Score=245.46 Aligned_cols=158 Identities=16% Similarity=0.196 Sum_probs=127.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEe---cCCCCeEEeccCCCccCCCCC-----------ccccCCc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDGK-----------SYSTNLA 66 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill---~~~~~~kl~dfg~~~~~~~~~-----------~~~~~~~ 66 (340)
+++.+++.|+.||+.||.|||+++ ||||||||+|||| +.++.+||+|||+++...... ...||+.
T Consensus 100 l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~ 178 (483)
T 3sv0_A 100 LSLKTVLMLADQMINRVEFVHSKS-FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTAR 178 (483)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCcc
Confidence 578899999999999999999999 9999999999999 588999999999998654332 4568999
Q ss_pred ccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchh-------HHHhhhhhccccccccCCCCCchhHHHHHHHHH
Q 019495 67 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-------DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 139 (340)
Q Consensus 67 y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 139 (340)
|+|||++.+..++.++|||||||++|||++|+.||..... ..+.......... .+...++.++.+++.
T Consensus 179 Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~-----~l~~~~p~~l~~li~ 253 (483)
T 3sv0_A 179 YASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIE-----ALCRGYPTEFASYFH 253 (483)
T ss_dssp TCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHH-----HHHTTSCHHHHHHHH
T ss_pred ccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHH-----HHhcCCcHHHHHHHH
Confidence 9999999988899999999999999999999999865321 1111111111100 111234578999999
Q ss_pred HhhccCCCCCCCHHHHHHHhccccc
Q 019495 140 RCLQYEPRERPNPKSLVTALSPLQK 164 (340)
Q Consensus 140 ~cl~~~p~~Rps~~~i~~~L~~~~~ 164 (340)
.||+.+|++||++.+|++.|+.+..
T Consensus 254 ~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 254 YCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp HHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred HHhcCChhhCcCHHHHHHHHHHHHH
Confidence 9999999999999999999887743
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-30 Score=233.78 Aligned_cols=149 Identities=20% Similarity=0.289 Sum_probs=124.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC----CCccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.+|.+||+|||+++.... .....||+.|+|||++.+.
T Consensus 115 ~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 193 (345)
T 1xjd_A 115 FDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQ 193 (345)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcCC
Confidence 467888999999999999999999 99999999999999999999999999876432 2345789999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH-HH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK-SL 155 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~-~i 155 (340)
.++.++|+|||||++|||++|..||.......+....... ...++...+..+.+++.+||+.||++||++. +|
T Consensus 194 ~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i 267 (345)
T 1xjd_A 194 KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD------NPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDI 267 (345)
T ss_dssp CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCG
T ss_pred CCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhC------CCCCCcccCHHHHHHHHHHhcCCHhHcCCChHHH
Confidence 8999999999999999999999999765444333222211 1234555678999999999999999999997 66
Q ss_pred H
Q 019495 156 V 156 (340)
Q Consensus 156 ~ 156 (340)
+
T Consensus 268 ~ 268 (345)
T 1xjd_A 268 R 268 (345)
T ss_dssp G
T ss_pred H
Confidence 5
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-30 Score=229.35 Aligned_cols=153 Identities=22% Similarity=0.280 Sum_probs=124.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....||+.|+|||++.+.
T Consensus 138 l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 216 (321)
T 2c30_A 138 LNEEQIATVCEAVLQALAYLHAQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRS 216 (321)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCC
Confidence 578899999999999999999999 999999999999999999999999998765433 345689999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++||||||+++|+|++|+.||............ .....+. ...+...+..+.+++.+||+.||++|||+.+++
T Consensus 217 ~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 293 (321)
T 2c30_A 217 LYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL-RDSPPPK--LKNSHKVSPVLRDFLERMLVRDPQERATAQELL 293 (321)
T ss_dssp CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-HHSSCCC--CTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-hcCCCCC--cCccccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 8999999999999999999999998765333222111 1111111 112234567899999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
+
T Consensus 294 ~ 294 (321)
T 2c30_A 294 D 294 (321)
T ss_dssp T
T ss_pred c
Confidence 6
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.4e-31 Score=235.18 Aligned_cols=165 Identities=22% Similarity=0.284 Sum_probs=130.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-------ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~y~aPE~~ 73 (340)
+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...+++.|+|||++
T Consensus 124 ~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 202 (327)
T 3lxl_A 124 LDASRLLLYSSQICKGMEYLGSRR-CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 202 (327)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHh
Confidence 478889999999999999999999 9999999999999999999999999988654332 23467789999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhh----------hhccccccccCCCCCchhHHHHHHHHHHhhc
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR----------NLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 143 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 143 (340)
.+..++.++||||||+++|+|++|+.||........... ..............+..++..+.+++.+||+
T Consensus 203 ~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 282 (327)
T 3lxl_A 203 SDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWA 282 (327)
T ss_dssp HHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred ccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcC
Confidence 888889999999999999999999988765433211110 1111111222334456677899999999999
Q ss_pred cCCCCCCCHHHHHHHhcccccCC
Q 019495 144 YEPRERPNPKSLVTALSPLQKET 166 (340)
Q Consensus 144 ~~p~~Rps~~~i~~~L~~~~~~~ 166 (340)
.||++|||+.++++.|+.+....
T Consensus 283 ~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 283 PSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp SSGGGSCCHHHHHHHHHHC----
T ss_pred CChhhCcCHHHHHHHHHHHHhhh
Confidence 99999999999999999886554
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.9e-30 Score=236.40 Aligned_cols=154 Identities=17% Similarity=0.214 Sum_probs=125.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEec---CCCCeEEeccCCCccCCCCC----ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD---EDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~---~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~ 73 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++ .++.+||+|||+++...... ...||+.|+|||++
T Consensus 107 ~~e~~~~~i~~qil~aL~~lH~~g-ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l 185 (444)
T 3soa_A 107 YSEADASHCIQQILEAVLHCHQMG-VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVL 185 (444)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCceeecccCCcccCCHHHh
Confidence 467788999999999999999999 99999999999998 56789999999997665432 35789999999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
.+..++.++||||+||++|+|++|..||.......+.........+ +.......+++.+.+++.+||+.||++|||+.
T Consensus 186 ~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ 263 (444)
T 3soa_A 186 RKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD--FPSPEWDTVTPEAKDLINKMLTINPSKRITAA 263 (444)
T ss_dssp TTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC--CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred cCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCC--CCccccccCCHHHHHHHHHHcCCChhHCCCHH
Confidence 9888999999999999999999999999776544333222222111 11112234568899999999999999999999
Q ss_pred HHHH
Q 019495 154 SLVT 157 (340)
Q Consensus 154 ~i~~ 157 (340)
++++
T Consensus 264 e~L~ 267 (444)
T 3soa_A 264 EALK 267 (444)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9986
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-30 Score=225.99 Aligned_cols=158 Identities=19% Similarity=0.301 Sum_probs=129.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-----CccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~ 75 (340)
+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ....+++.|+|||++.+
T Consensus 103 ~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 181 (269)
T 4hcu_A 103 FAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF 181 (269)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCC-eecCCcchheEEEcCCCCEEeccccccccccccccccccCcccccccCCHHHhcC
Confidence 467889999999999999999999 999999999999999999999999998765432 23345678999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
..++.++||||||+++|+|++ |..||............... .....+...+..+.+++.+||+.||.+||++.+
T Consensus 182 ~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 256 (269)
T 4hcu_A 182 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-----FRLYKPRLASTHVYQIMNHCWRERPEDRPAFSR 256 (269)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-----CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcC-----ccCCCCCcCCHHHHHHHHHHccCCcccCcCHHH
Confidence 889999999999999999999 88888665443332222211 122334445688999999999999999999999
Q ss_pred HHHHhccccc
Q 019495 155 LVTALSPLQK 164 (340)
Q Consensus 155 i~~~L~~~~~ 164 (340)
+++.|+.+..
T Consensus 257 ll~~l~~l~~ 266 (269)
T 4hcu_A 257 LLRQLAEIAE 266 (269)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999987754
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-30 Score=238.19 Aligned_cols=156 Identities=22% Similarity=0.333 Sum_probs=120.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC-----------------------
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----------------------- 57 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----------------------- 57 (340)
+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 106 ~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (388)
T 3oz6_A 106 LEPVHKQYVVYQLIKVIKYLHSGG-LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ 184 (388)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC----------
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHeEEcCCCCEEecCCccccccccccccccccccccccccccccccc
Confidence 467788899999999999999999 99999999999999999999999999975432
Q ss_pred --CCccccCCcccCcccccC-CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccc--------------
Q 019495 58 --GKSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS-------------- 120 (340)
Q Consensus 58 --~~~~~~~~~y~aPE~~~~-~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~-------------- 120 (340)
.....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||++.............+..+
T Consensus 185 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~ 264 (388)
T 3oz6_A 185 PILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAK 264 (388)
T ss_dssp -----CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHH
T ss_pred ccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHH
Confidence 123468999999999986 568999999999999999999999997653322211111100000
Q ss_pred ---------------ccCC------------CCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 121 ---------------CLEG------------QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 121 ---------------~~~~------------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.... ..+..+++.+.+|+.+||+.||++|||+.++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~ 328 (388)
T 3oz6_A 265 TMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALK 328 (388)
T ss_dssp HHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhC
Confidence 0000 011134578999999999999999999999986
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.8e-30 Score=233.99 Aligned_cols=149 Identities=17% Similarity=0.297 Sum_probs=118.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC----CCccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.... ..+..||+.|+|||++.+.
T Consensus 150 l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~ 228 (396)
T 4dc2_A 150 LPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGE 228 (396)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEECCCCCEEEeecceeeecccCCCccccccCCcccCCchhhcCC
Confidence 467888999999999999999999 99999999999999999999999999875321 2356789999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHh-----hhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR-----DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
.++.++|+|||||++|||++|+.||......... ......+.. ....+|..++..+.++|.+||+.||.+||+
T Consensus 229 ~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~~s~~~~~li~~lL~~dP~~R~~ 306 (396)
T 4dc2_A 229 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRSLSVKAASVLKSFLNKDPKERLG 306 (396)
T ss_dssp CBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH--CCCCCCTTSCHHHHHHHHHHTCSCTTTSTT
T ss_pred CCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc--cccCCCCcCCHHHHHHHHHHhcCCHhHcCC
Confidence 8999999999999999999999998532111000 000111111 122355667789999999999999999998
Q ss_pred H
Q 019495 152 P 152 (340)
Q Consensus 152 ~ 152 (340)
+
T Consensus 307 ~ 307 (396)
T 4dc2_A 307 C 307 (396)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-30 Score=235.09 Aligned_cols=161 Identities=20% Similarity=0.313 Sum_probs=128.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...+|+.|+|||++.
T Consensus 169 l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~ 247 (344)
T 1rjb_A 169 LTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF 247 (344)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhc
Confidence 467889999999999999999999 9999999999999999999999999987654332 234577899999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
++.++.++||||||+++|+|+| |..||.............. .......+..++..+.+++.+||+.||.+|||+.
T Consensus 248 ~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ 323 (344)
T 1rjb_A 248 EGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQ----NGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFP 323 (344)
T ss_dssp HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH----TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred cCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHh----cCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHH
Confidence 8889999999999999999998 8888865432211111111 1122334555678999999999999999999999
Q ss_pred HHHHHhcccccCC
Q 019495 154 SLVTALSPLQKET 166 (340)
Q Consensus 154 ~i~~~L~~~~~~~ 166 (340)
++++.|+.+....
T Consensus 324 ~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 324 NLTSFLGCQLADA 336 (344)
T ss_dssp HHHHHHHHHC---
T ss_pred HHHHHHHHHHHHH
Confidence 9999998875543
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-30 Score=230.46 Aligned_cols=159 Identities=21% Similarity=0.299 Sum_probs=125.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+++.|+|||++.
T Consensus 144 ~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 222 (313)
T 3brb_A 144 IPLQTLLKFMVDIALGMEYLSNRN-FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLA 222 (313)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhc
Confidence 467889999999999999999999 999999999999999999999999998765432 2234577899999999
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++||||||+++|+|++ |..||.......+....... .....+..++..+.+++.+||+.||.+||++.
T Consensus 223 ~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ 297 (313)
T 3brb_A 223 DRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHG-----HRLKQPEDCLDELYEIMYSCWRTDPLDRPTFS 297 (313)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT-----CCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHH
T ss_pred CCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcC-----CCCCCCccccHHHHHHHHHHcCCChhhCcCHH
Confidence 8889999999999999999999 77777654333222221111 12233455668899999999999999999999
Q ss_pred HHHHHhcccccC
Q 019495 154 SLVTALSPLQKE 165 (340)
Q Consensus 154 ~i~~~L~~~~~~ 165 (340)
++++.|+.+...
T Consensus 298 ~l~~~L~~l~~~ 309 (313)
T 3brb_A 298 VLRLQLEKLLES 309 (313)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999887654
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-30 Score=224.14 Aligned_cols=158 Identities=18% Similarity=0.293 Sum_probs=122.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCC--CccccCCCCCCEEecC--------CCCeEEeccCCCccCCCCC--ccccCCccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKG--RALYHDLNAYRILFDE--------DGNPRLSTFGLMKNSRDGK--SYSTNLAFT 68 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~--~iiH~dlk~~nill~~--------~~~~kl~dfg~~~~~~~~~--~~~~~~~y~ 68 (340)
+++.....++.||+.||.|||+++ +|+||||||+||+++. ++.+||+|||+++...... ...+|+.|+
T Consensus 102 ~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~ 181 (271)
T 3dtc_A 102 IPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWM 181 (271)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-------------CCGGGS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccccccccCCCCcccee
Confidence 467889999999999999999987 3789999999999985 6789999999987654332 456899999
Q ss_pred CcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCC
Q 019495 69 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 148 (340)
Q Consensus 69 aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~ 148 (340)
|||++.+..++.++||||||+++|+|++|+.||............... ......+..++..+.+++.+||+.||++
T Consensus 182 aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~ 257 (271)
T 3dtc_A 182 APEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMN----KLALPIPSTCPEPFAKLMEDCWNPDPHS 257 (271)
T ss_dssp CHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTS----CCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred CHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcC----CCCCCCCcccCHHHHHHHHHHhcCCccc
Confidence 999998888999999999999999999999998765433222221111 1223345566789999999999999999
Q ss_pred CCCHHHHHHHhccc
Q 019495 149 RPNPKSLVTALSPL 162 (340)
Q Consensus 149 Rps~~~i~~~L~~~ 162 (340)
|||+.++++.|+.+
T Consensus 258 Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 258 RPSFTNILDQLTTI 271 (271)
T ss_dssp SCCHHHHHHHHHC-
T ss_pred CcCHHHHHHHHhcC
Confidence 99999999998753
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-31 Score=241.04 Aligned_cols=144 Identities=17% Similarity=0.151 Sum_probs=116.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-CccccCCcccCcccccCC----
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTG---- 76 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~---- 76 (340)
+|..++.|+.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....| +.|+|||++.+.
T Consensus 204 ~~~~~~~i~~qi~~aL~~LH~~~-ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~ 281 (377)
T 3byv_A 204 VHHARLQLTLQVIRLLASLHHYG-LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATIS 281 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTH
T ss_pred cHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhccccccc
Confidence 35788899999999999999999 999999999999999999999999999865443 23456 999999999877
Q ss_pred -------CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCC
Q 019495 77 -------RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 149 (340)
Q Consensus 77 -------~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R 149 (340)
.++.++|||||||++|||++|+.||........ ...+. .....++..+.++|.+||+.||++|
T Consensus 282 ~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~----~~~~~------~~~~~~~~~~~~li~~~L~~dp~~R 351 (377)
T 3byv_A 282 YHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGG----SEWIF------RSCKNIPQPVRALLEGFLRYPKEDR 351 (377)
T ss_dssp HHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CC----SGGGG------SSCCCCCHHHHHHHHHHTCSSGGGC
T ss_pred ccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccc----hhhhh------hhccCCCHHHHHHHHHHcCCCchhC
Confidence 789999999999999999999999865422111 11111 1123455789999999999999999
Q ss_pred CCHHHHHH
Q 019495 150 PNPKSLVT 157 (340)
Q Consensus 150 ps~~~i~~ 157 (340)
|++.++++
T Consensus 352 pt~~e~l~ 359 (377)
T 3byv_A 352 LLPLQAME 359 (377)
T ss_dssp CCHHHHHT
T ss_pred CCHHHHhh
Confidence 99999985
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.2e-30 Score=240.22 Aligned_cols=156 Identities=15% Similarity=0.241 Sum_probs=117.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||++.+..
T Consensus 161 l~~~~~~~~~~qil~aL~~lH~~~-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 239 (464)
T 3ttj_A 161 LDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 239 (464)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCCC-----CCCC----CCCTTCCHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChHhEEEeCCCCEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCCC
Confidence 467788899999999999999999 999999999999999999999999999876543 3457899999999999889
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccc-------------------------ccCCCCC-----
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS-------------------------CLEGQFT----- 127 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~----- 127 (340)
++.++|||||||++|||++|+.||.+.............+..+ .+...++
T Consensus 240 ~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (464)
T 3ttj_A 240 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFP 319 (464)
T ss_dssp CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSC
T ss_pred CCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccc
Confidence 9999999999999999999999997653221111111100000 0000001
Q ss_pred ------chhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 128 ------DDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 128 ------~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
...+..+.+|+.+||+.||++|||+.++++
T Consensus 320 ~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 320 ADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp CSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 012578999999999999999999999986
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.3e-30 Score=225.53 Aligned_cols=156 Identities=17% Similarity=0.266 Sum_probs=120.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||++.+.
T Consensus 98 l~~~~~~~~~~ql~~~l~~lH~~~-ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~ 176 (292)
T 3o0g_A 98 LDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 176 (292)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCCccccCCcChHHHcCC
Confidence 467888999999999999999999 999999999999999999999999999765422 234678999999999876
Q ss_pred C-CCCCcceehHHHHHHHHhhCCCCCCcc-hhHHHhhhhhccccc-----------------------cccCCCCCchhH
Q 019495 77 R-VTPESVIYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNLQMLTD-----------------------SCLEGQFTDDDG 131 (340)
Q Consensus 77 ~-~~~~~Di~s~G~il~el~~g~~~~~~~-~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~ 131 (340)
. ++.++|||||||++|+|++|+.|+... ............... ...........+
T Consensus 177 ~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (292)
T 3o0g_A 177 KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLN 256 (292)
T ss_dssp SCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCC
T ss_pred CCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccC
Confidence 5 799999999999999999998875432 111111111000000 000011223456
Q ss_pred HHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 132 TELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 132 ~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
..+.+++.+||+.||++|||+.++++
T Consensus 257 ~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 257 ATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hHHHHHHHHHhccChhhCCCHHHHhc
Confidence 88999999999999999999999985
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-30 Score=232.93 Aligned_cols=152 Identities=22% Similarity=0.350 Sum_probs=118.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++.++..++.||+.||.|||+++ |+||||||+||+++ ++.+||+|||+++...... ...||+.|+|||++.
T Consensus 105 ~~~~~~~~i~~qi~~al~~lH~~~-iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 182 (343)
T 3dbq_A 105 IDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 182 (343)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEE-TTEEEECCCSSSCCC------------CCCCSSCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEE-CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHh
Confidence 467889999999999999999999 99999999999997 5789999999998654332 346899999999986
Q ss_pred C-----------CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhc
Q 019495 75 T-----------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 143 (340)
Q Consensus 75 ~-----------~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 143 (340)
+ ..++.++|||||||++|+|++|+.||........ ......+......++...+..+.+++.+||+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~ 259 (343)
T 3dbq_A 183 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLK 259 (343)
T ss_dssp HCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH---HHHHHHCTTSCCCCCCCSCHHHHHHHHHHTC
T ss_pred hccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH---HHHHHhcCCcccCCcccCCHHHHHHHHHHcC
Confidence 4 5678899999999999999999999865322211 1112222223334555556789999999999
Q ss_pred cCCCCCCCHHHHHH
Q 019495 144 YEPRERPNPKSLVT 157 (340)
Q Consensus 144 ~~p~~Rps~~~i~~ 157 (340)
.||.+|||+.+++.
T Consensus 260 ~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 260 RDPKQRISIPELLA 273 (343)
T ss_dssp SSTTTSCCHHHHHT
T ss_pred CChhHCCCHHHHHh
Confidence 99999999999985
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-30 Score=230.64 Aligned_cols=157 Identities=21% Similarity=0.296 Sum_probs=128.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCcccccC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~ 75 (340)
++.+++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...+++.|+|||++.+
T Consensus 148 ~~~~~~~i~~qi~~~l~~lH~~~-ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 226 (314)
T 2ivs_A 148 TMGDLISFAWQISQGMQYLAEMK-LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFD 226 (314)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC-CcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcC
Confidence 56788999999999999999999 9999999999999999999999999987654332 2345678999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
..++.++||||||+++|+|++ |..||.......+...... ......+..++..+.+++.+||+.||++||++.+
T Consensus 227 ~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ 301 (314)
T 2ivs_A 227 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKT-----GHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFAD 301 (314)
T ss_dssp CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT-----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhc-----CCcCCCCccCCHHHHHHHHHHccCChhhCcCHHH
Confidence 888999999999999999999 8888866543322211111 1122345566789999999999999999999999
Q ss_pred HHHHhccccc
Q 019495 155 LVTALSPLQK 164 (340)
Q Consensus 155 i~~~L~~~~~ 164 (340)
+++.|+.+..
T Consensus 302 l~~~l~~~~~ 311 (314)
T 2ivs_A 302 ISKDLEKMMV 311 (314)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999987653
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-30 Score=235.61 Aligned_cols=152 Identities=22% Similarity=0.353 Sum_probs=118.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
+++..+..++.||+.||.|||+++ |+||||||+|||++ ++.+||+|||+++..... ....||+.|+|||++.
T Consensus 152 ~~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 229 (390)
T 2zmd_A 152 IDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIK 229 (390)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCCGGGEEES-SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEEE-CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhh
Confidence 467788999999999999999999 99999999999995 588999999999865433 2346899999999986
Q ss_pred C-----------CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhc
Q 019495 75 T-----------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 143 (340)
Q Consensus 75 ~-----------~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 143 (340)
+ ..++.++|||||||++|+|++|+.||....... ..+..+.+......++...+..+.+++.+||+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 306 (390)
T 2zmd_A 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLK 306 (390)
T ss_dssp CC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH---HHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTC
T ss_pred hccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH---HHHHHHhCccccCCCCccchHHHHHHHHHHcc
Confidence 4 358889999999999999999999986532211 11112222222333444456789999999999
Q ss_pred cCCCCCCCHHHHHH
Q 019495 144 YEPRERPNPKSLVT 157 (340)
Q Consensus 144 ~~p~~Rps~~~i~~ 157 (340)
.||.+||++.++++
T Consensus 307 ~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 307 RDPKQRISIPELLA 320 (390)
T ss_dssp SSTTTSCCHHHHHT
T ss_pred cChhhCCCHHHHhh
Confidence 99999999999985
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.7e-30 Score=232.64 Aligned_cols=147 Identities=22% Similarity=0.258 Sum_probs=122.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC----CCccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.+|.+||+|||+++.... .....||+.|+|||++.+.
T Consensus 136 ~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 214 (373)
T 2r5t_A 136 FLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQ 214 (373)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEeeCccccccccCCCccccccCCccccCHHHhCCC
Confidence 356677889999999999999999 99999999999999999999999999875322 2356789999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
.++.++|+|||||++|||++|..||.......+....... ...++..++..+.++|.+||+.||.+||++.+
T Consensus 215 ~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 215 PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK------PLQLKPNITNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHS------CCCCCSSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred CCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc------ccCCCCCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence 8999999999999999999999999776544333322222 12344556788999999999999999999853
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.6e-30 Score=233.07 Aligned_cols=154 Identities=18% Similarity=0.211 Sum_probs=124.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC----CeEEeccCCCccCCCC---CccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~----~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~ 73 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++ .+||+|||+++..... ....||+.|+|||++
T Consensus 112 l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~ 190 (361)
T 2yab_A 112 LSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190 (361)
T ss_dssp CBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCccccCCCCccEECchHH
Confidence 467889999999999999999999 99999999999998776 7999999999876543 345689999999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
.+..++.++|||||||++|+|++|..||.+.....+......... .+........+..+.++|.+||..||.+|||+.
T Consensus 191 ~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~ 268 (361)
T 2yab_A 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSY--DFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQ 268 (361)
T ss_dssp TTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC--CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred cCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC--CCCchhccCCCHHHHHHHHHHCCCChhHCcCHH
Confidence 988899999999999999999999999977544333222211110 011111233467899999999999999999999
Q ss_pred HHHH
Q 019495 154 SLVT 157 (340)
Q Consensus 154 ~i~~ 157 (340)
+++.
T Consensus 269 e~l~ 272 (361)
T 2yab_A 269 EALR 272 (361)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9985
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=6.2e-30 Score=229.38 Aligned_cols=160 Identities=19% Similarity=0.265 Sum_probs=125.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-------ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~y~aPE~~ 73 (340)
+++.+++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...+++.|+|||++
T Consensus 144 ~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 222 (333)
T 1mqb_A 144 FSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222 (333)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhc
Confidence 467889999999999999999999 9999999999999999999999999987654321 12346789999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.+..++.++||||||+++|+|++ |+.||.......+...... ......+..++..+.+++.+||+.||++||++
T Consensus 223 ~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~ 297 (333)
T 1mqb_A 223 SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIND-----GFRLPTPMDCPSAIYQLMMQCWQQERARRPKF 297 (333)
T ss_dssp HSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-----TCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCH
T ss_pred ccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHC-----CCcCCCcccCCHHHHHHHHHHcCCChhhCcCH
Confidence 98889999999999999999999 9888865443322221111 11223345567889999999999999999999
Q ss_pred HHHHHHhcccccCC
Q 019495 153 KSLVTALSPLQKET 166 (340)
Q Consensus 153 ~~i~~~L~~~~~~~ 166 (340)
.++++.|+.+....
T Consensus 298 ~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 298 ADIVSILDKLIRAP 311 (333)
T ss_dssp HHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHhcc
Confidence 99999998876554
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.2e-30 Score=224.49 Aligned_cols=158 Identities=24% Similarity=0.368 Sum_probs=123.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-ccccCCcccCcccccCCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-SYSTNLAFTPPEYLRTGRVT 79 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~ 79 (340)
+++..+..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++....... ...+++.|+|||++.+..++
T Consensus 114 ~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 192 (278)
T 1byg_A 114 LGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFS 192 (278)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC------------CCTTTSCHHHHHHCCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-ccccCCCcceEEEeCCCcEEEeeccccccccccccCCCccccccCHHHhCCCCCC
Confidence 467788999999999999999999 9999999999999999999999999987654432 34567899999999888899
Q ss_pred CCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 019495 80 PESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 158 (340)
Q Consensus 80 ~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 158 (340)
.++||||||+++|+|++ |+.||.............. ......+..+++.+.+++.+||+.||++||++.++++.
T Consensus 193 ~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 267 (278)
T 1byg_A 193 TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-----GYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ 267 (278)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTT-----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred chhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc-----CCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHH
Confidence 99999999999999998 8888765433222211111 11223455667899999999999999999999999999
Q ss_pred hccccc
Q 019495 159 LSPLQK 164 (340)
Q Consensus 159 L~~~~~ 164 (340)
|+.+..
T Consensus 268 L~~i~~ 273 (278)
T 1byg_A 268 LEHIKT 273 (278)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 988753
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-30 Score=244.18 Aligned_cols=159 Identities=20% Similarity=0.336 Sum_probs=130.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ...+++.|+|||++.+
T Consensus 315 ~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 393 (495)
T 1opk_A 315 VSAVVLLYMATQISSAMEYLEKKN-FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 393 (495)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhc
Confidence 467888999999999999999999 9999999999999999999999999998754332 2234678999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+.++.++|||||||++|||++ |..||.......+... .........+..++..+.+||.+||+.||++|||+.+
T Consensus 394 ~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 468 (495)
T 1opk_A 394 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAE 468 (495)
T ss_dssp CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH-----HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHH-----HHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHH
Confidence 889999999999999999999 8888765433222111 1112233445667789999999999999999999999
Q ss_pred HHHHhcccccC
Q 019495 155 LVTALSPLQKE 165 (340)
Q Consensus 155 i~~~L~~~~~~ 165 (340)
|++.|+.+...
T Consensus 469 l~~~L~~~~~~ 479 (495)
T 1opk_A 469 IHQAFETMFQE 479 (495)
T ss_dssp HHHHHHTSCSS
T ss_pred HHHHHHHHHhc
Confidence 99999987543
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.2e-30 Score=227.22 Aligned_cols=156 Identities=19% Similarity=0.306 Sum_probs=120.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccC-
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRT- 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~- 75 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||++.+
T Consensus 116 ~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~ 194 (311)
T 3niz_A 116 LQDSQIKIYLYQLLRGVAHCHQHR-ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGS 194 (311)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccCCCchHhEEECCCCCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCC
Confidence 467788999999999999999999 999999999999999999999999999865422 23467999999999876
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccc--------------------cC----CCCCchhH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC--------------------LE----GQFTDDDG 131 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~----~~~~~~~~ 131 (340)
..++.++|||||||++|+|++|+.||...............+..+. .. ......++
T Consensus 195 ~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (311)
T 3niz_A 195 KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFC 274 (311)
T ss_dssp CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCC
T ss_pred CCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccC
Confidence 4589999999999999999999999865432221111111000000 00 00112345
Q ss_pred HHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 132 TELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 132 ~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.++.+++.+||+.||++|||+.++++
T Consensus 275 ~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 275 QEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 78999999999999999999999986
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.4e-30 Score=229.45 Aligned_cols=149 Identities=17% Similarity=0.310 Sum_probs=118.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC----CCccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~ 76 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.+|.+||+|||+++.... .....||+.|+|||++.+.
T Consensus 107 l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 185 (345)
T 3a8x_A 107 LPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGE 185 (345)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEEeccccccccCCCCcccccCCCccccCccccCCC
Confidence 467888999999999999999999 99999999999999999999999999875322 2345789999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHH-----HhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
.++.++|+|||||++|||++|+.||....... ........+... ...+|...+..+.+++.+||+.||.+||+
T Consensus 186 ~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~ 263 (345)
T 3a8x_A 186 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPRSLSVKAASVLKSFLNKDPKERLG 263 (345)
T ss_dssp CBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHTCSSTTTSTT
T ss_pred CCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhcCCHhHCCC
Confidence 89999999999999999999999985421100 000001111111 12345566789999999999999999999
Q ss_pred H
Q 019495 152 P 152 (340)
Q Consensus 152 ~ 152 (340)
+
T Consensus 264 ~ 264 (345)
T 3a8x_A 264 C 264 (345)
T ss_dssp C
T ss_pred C
Confidence 6
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-30 Score=235.21 Aligned_cols=160 Identities=22% Similarity=0.242 Sum_probs=119.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--------CccccCCcccCccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--------KSYSTNLAFTPPEY 72 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--------~~~~~~~~y~aPE~ 72 (340)
+++...+.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+++.|+|||+
T Consensus 189 ~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 267 (373)
T 3c1x_A 189 PTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267 (373)
T ss_dssp CBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC---------------------CCGGGSCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EecCccchheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHH
Confidence 357788999999999999999999 999999999999999999999999998754322 12245678999999
Q ss_pred ccCCCCCCCcceehHHHHHHHHhhC-CCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 73 LRTGRVTPESVIYSFGTLLLDLLSG-KHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 73 ~~~~~~~~~~Di~s~G~il~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
+.+..++.++||||||+++|||++| .+||.......+...... ......+..++..+.+++.+||+.||++||+
T Consensus 268 ~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~-----~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs 342 (373)
T 3c1x_A 268 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-----GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPS 342 (373)
T ss_dssp HHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHT-----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHHHHHHHHHcCCChhhCcC
Confidence 9988899999999999999999994 555543322111111111 1112234456788999999999999999999
Q ss_pred HHHHHHHhcccccCC
Q 019495 152 PKSLVTALSPLQKET 166 (340)
Q Consensus 152 ~~~i~~~L~~~~~~~ 166 (340)
+.++++.|+.+....
T Consensus 343 ~~ell~~L~~i~~~~ 357 (373)
T 3c1x_A 343 FSELVSRISAIFSTF 357 (373)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999998886654
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=99.96 E-value=6e-30 Score=224.78 Aligned_cols=156 Identities=19% Similarity=0.340 Sum_probs=118.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||++.+.
T Consensus 97 ~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~ 175 (288)
T 1ob3_A 97 LESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGS 175 (288)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEeECccccccCccccccccccccccccCchheeCC
Confidence 467788999999999999999999 999999999999999999999999998754322 234679999999999764
Q ss_pred -CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccc----------------cccc-------CCCCCchhHH
Q 019495 77 -RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT----------------DSCL-------EGQFTDDDGT 132 (340)
Q Consensus 77 -~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~----------------~~~~-------~~~~~~~~~~ 132 (340)
.++.++|||||||++|+|++|+.||................. ++.+ ...+....+.
T Consensus 176 ~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (288)
T 1ob3_A 176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDE 255 (288)
T ss_dssp CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCH
T ss_pred CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCH
Confidence 589999999999999999999999876433221111111000 0000 0011234568
Q ss_pred HHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 133 ELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 133 ~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.+.+++.+||+.||++|||+.++++
T Consensus 256 ~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 256 SGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHcCCCcccCCCHHHHhc
Confidence 8999999999999999999999985
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-30 Score=228.88 Aligned_cols=160 Identities=21% Similarity=0.334 Sum_probs=129.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...+++.|+|||++.
T Consensus 142 ~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 220 (313)
T 1t46_A 142 LDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF 220 (313)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhc
Confidence 467889999999999999999999 9999999999999999999999999988665432 234567899999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++||||||+++|+|++ |..||............... ......+..++..+.+++.+||+.||.+|||+.
T Consensus 221 ~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ 296 (313)
T 1t46_A 221 NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKE----GFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFK 296 (313)
T ss_dssp HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHH----TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhcc----CCCCCCcccCCHHHHHHHHHHcCCCchhCcCHH
Confidence 8889999999999999999999 88887654322211111111 112233445668899999999999999999999
Q ss_pred HHHHHhcccccC
Q 019495 154 SLVTALSPLQKE 165 (340)
Q Consensus 154 ~i~~~L~~~~~~ 165 (340)
++++.|+.+...
T Consensus 297 ell~~L~~~~~~ 308 (313)
T 1t46_A 297 QIVQLIEKQISE 308 (313)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999877543
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.6e-30 Score=238.57 Aligned_cols=156 Identities=18% Similarity=0.302 Sum_probs=121.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCC--eEEeccCCCccCCCC-CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN--PRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~--~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~ 77 (340)
+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||+++..... ....+|+.|+|||++.+..
T Consensus 197 ~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~ 275 (429)
T 3kvw_A 197 FSLPLVRKFAHSILQCLDALHKNR-IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGAR 275 (429)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHT-EECSCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHHTBC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEccCCCcceEEeecccceecCCcccccCCCCCccChHHHhCCC
Confidence 467889999999999999999999 999999999999999887 999999998765443 3557899999999999888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccc-----------------ccc-c------------------
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML-----------------TDS-C------------------ 121 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~-----------------~~~-~------------------ 121 (340)
++.++|||||||++|||++|..||...............+ .+. .
T Consensus 276 ~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (429)
T 3kvw_A 276 YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLN 355 (429)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEEC
T ss_pred CCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCccccccccccccccccc
Confidence 9999999999999999999999887643221111100000 000 0
Q ss_pred -----------------cCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 122 -----------------LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 122 -----------------~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+...++...++.+.+||.+||+.||++|||+.++++
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~ 408 (429)
T 3kvw_A 356 GGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALR 408 (429)
T ss_dssp CEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhC
Confidence 000011122577999999999999999999999986
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-30 Score=225.41 Aligned_cols=157 Identities=23% Similarity=0.276 Sum_probs=125.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...+++.|+|||++.+
T Consensus 110 ~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 188 (281)
T 3cc6_A 110 LKVLTLVLYSLQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 188 (281)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEEETTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEECCCCcEEeCccCCCcccccccccccccCCCCcceeCchhhcc
Confidence 467888999999999999999999 9999999999999999999999999987654332 2345778999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
..++.++||||||+++|+|++ |+.||.............. ......+..++..+.+++.+||+.||++||++.+
T Consensus 189 ~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~e 263 (281)
T 3cc6_A 189 RRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEK-----GDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTE 263 (281)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHH-----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhc-----CCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHH
Confidence 889999999999999999998 9988864332222111111 1112234456688999999999999999999999
Q ss_pred HHHHhcccc
Q 019495 155 LVTALSPLQ 163 (340)
Q Consensus 155 i~~~L~~~~ 163 (340)
+++.|+.+.
T Consensus 264 ll~~L~~~~ 272 (281)
T 3cc6_A 264 LVCSLSDVY 272 (281)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998764
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.4e-30 Score=224.33 Aligned_cols=158 Identities=23% Similarity=0.321 Sum_probs=128.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-----CccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~ 75 (340)
+++.++..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||++.+
T Consensus 117 ~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 195 (283)
T 3gen_A 117 FQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY 195 (283)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCccceEEEcCCCCEEEccccccccccccccccccCCccCcccCCHHHhcc
Confidence 467889999999999999999999 999999999999999999999999998765432 22345678999999998
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
..++.++||||||+++|+|++ |+.||............... .....+...+..+.+++.+||+.||.+|||+.+
T Consensus 196 ~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ 270 (283)
T 3gen_A 196 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-----LRLYRPHLASEKVYTIMYSCWHEKADERPTFKI 270 (283)
T ss_dssp CCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHH
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcc-----cCCCCCCcCCHHHHHHHHHHccCChhHCcCHHH
Confidence 889999999999999999998 88888665433332222211 122234445688999999999999999999999
Q ss_pred HHHHhccccc
Q 019495 155 LVTALSPLQK 164 (340)
Q Consensus 155 i~~~L~~~~~ 164 (340)
+++.|..+..
T Consensus 271 ll~~L~~~~~ 280 (283)
T 3gen_A 271 LLSNILDVMD 280 (283)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999987643
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=99.96 E-value=5e-30 Score=230.07 Aligned_cols=159 Identities=22% Similarity=0.324 Sum_probs=130.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...+++.|+|||++.
T Consensus 154 ~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 232 (334)
T 2pvf_A 154 MTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 232 (334)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhc
Confidence 467889999999999999999999 9999999999999999999999999988654432 234567899999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++||||||+++|+|++ |..||.......+....... .....+..++..+.+++.+||+.||.+||++.
T Consensus 233 ~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ 307 (334)
T 2pvf_A 233 DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG-----HRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 307 (334)
T ss_dssp HCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcC-----CCCCCCccCCHHHHHHHHHHccCChhhCcCHH
Confidence 8888999999999999999999 88888765443322221111 12234455678999999999999999999999
Q ss_pred HHHHHhcccccC
Q 019495 154 SLVTALSPLQKE 165 (340)
Q Consensus 154 ~i~~~L~~~~~~ 165 (340)
++++.|+.+...
T Consensus 308 ell~~L~~l~~~ 319 (334)
T 2pvf_A 308 QLVEDLDRILTL 319 (334)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 999999988654
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-30 Score=231.10 Aligned_cols=165 Identities=15% Similarity=0.196 Sum_probs=123.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHhC---------CCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------------Cc
Q 019495 2 KWAMRLRVVLHLAQALEYCTSK---------GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------------KS 60 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~---------~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------------~~ 60 (340)
+|..+..++.||+.||.|||+. + |+||||||+||+++.++.+||+|||+++..... ..
T Consensus 109 ~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~ 187 (336)
T 3g2f_A 109 DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA-ISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAIS 187 (336)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC-EECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------CC
T ss_pred chhHHHHHHHHHHHHHHHHHhhhccccccccc-eeecccccceEEEcCCCcEEEeeccceeecccccccCcccccccccc
Confidence 5778899999999999999999 8 999999999999999999999999999765322 13
Q ss_pred cccCCcccCcccccC-------CCCCCCcceehHHHHHHHHhhCCCCCCcchh-H-----------------HHhhhhhc
Q 019495 61 YSTNLAFTPPEYLRT-------GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-D-----------------LIRDRNLQ 115 (340)
Q Consensus 61 ~~~~~~y~aPE~~~~-------~~~~~~~Di~s~G~il~el~~g~~~~~~~~~-~-----------------~~~~~~~~ 115 (340)
..||+.|+|||++.+ ..++.++|||||||++|||++|+.|+..... . .+......
T Consensus 188 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (336)
T 3g2f_A 188 EVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSR 267 (336)
T ss_dssp TTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTT
T ss_pred CCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcc
Confidence 458999999999986 3456789999999999999999766532110 0 00000000
Q ss_pred cccccccCCCC--CchhHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccccCCC
Q 019495 116 MLTDSCLEGQF--TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 167 (340)
Q Consensus 116 ~~~~~~~~~~~--~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~~ 167 (340)
....+.+.... ...++..+.++|.+||+.||++|||+.++++.|+.+.....
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~ 321 (336)
T 3g2f_A 268 EKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE 321 (336)
T ss_dssp SCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred cccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence 00011111111 22366789999999999999999999999999988775543
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=221.89 Aligned_cols=150 Identities=23% Similarity=0.353 Sum_probs=122.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--CccccCCcccCcccccCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTGRV 78 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~~ 78 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.++|+|||++...... ....+++.|+|||++.+..+
T Consensus 106 ~~~~~~~~~~~qi~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 184 (279)
T 3fdn_A 106 FDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMH 184 (279)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTT-CEECCCCGGGEEECTTSCEEECSCCEESCC--------CCCCTTCCHHHHTTCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHhEEEcCCCCEEEEeccccccCCcccccccCCCCCccCHhHhccCCC
Confidence 467788999999999999999999 999999999999999999999999987654433 34568999999999998888
Q ss_pred CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 79 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 79 ~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+.++||||||+++|+|++|..||.............. ....++...+..+.+++.+||+.||.+|||+.++++
T Consensus 185 ~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp CTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH------TCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred CccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHh------CCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 9999999999999999999999876544332222111 122344556688999999999999999999999986
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=4.8e-30 Score=224.22 Aligned_cols=160 Identities=22% Similarity=0.329 Sum_probs=130.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||++....... ...++..|+|||++.+
T Consensus 106 ~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 184 (279)
T 1qpc_A 106 LTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY 184 (279)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCccCccChhhhcc
Confidence 467889999999999999999999 9999999999999999999999999988665432 2345678999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+.++.++||||||+++|+|++ |+.||............... .....+..++..+.+++.+||+.||++|||+.+
T Consensus 185 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ 259 (279)
T 1qpc_A 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-----YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDY 259 (279)
T ss_dssp CEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcc-----cCCCCcccccHHHHHHHHHHhccChhhCCCHHH
Confidence 888999999999999999999 88887664433222211111 122334556689999999999999999999999
Q ss_pred HHHHhcccccCC
Q 019495 155 LVTALSPLQKET 166 (340)
Q Consensus 155 i~~~L~~~~~~~ 166 (340)
+++.|+.+....
T Consensus 260 l~~~l~~~~~~~ 271 (279)
T 1qpc_A 260 LRSVLEDFFTAT 271 (279)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhc
Confidence 999999886553
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.1e-30 Score=225.87 Aligned_cols=160 Identities=26% Similarity=0.482 Sum_probs=127.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
++|..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||++.
T Consensus 130 ~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~ 208 (307)
T 2nru_A 130 LSWHMRCKIAQGAANGINFLHENH-HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALR 208 (307)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhc
Confidence 478899999999999999999999 999999999999999999999999998765432 2346789999999987
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHH----Hhhh------hhccccccccCCCCCchhHHHHHHHHHHhhcc
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL----IRDR------NLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 144 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~----~~~~------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 144 (340)
+.++.++||||||+++|+|++|..||....... +... .+....+... ...+...+..+.+++.+||+.
T Consensus 209 -~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~ 286 (307)
T 2nru_A 209 -GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHE 286 (307)
T ss_dssp -TEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCS
T ss_pred -CCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCC
Confidence 457899999999999999999998886532111 1100 0111111111 234556678899999999999
Q ss_pred CCCCCCCHHHHHHHhcccc
Q 019495 145 EPRERPNPKSLVTALSPLQ 163 (340)
Q Consensus 145 ~p~~Rps~~~i~~~L~~~~ 163 (340)
||.+|||+.++++.|+.+.
T Consensus 287 ~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 287 KKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp STTTSCCHHHHHHHHHHHC
T ss_pred CcccCcCHHHHHHHHHHHh
Confidence 9999999999999998764
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-30 Score=227.07 Aligned_cols=164 Identities=18% Similarity=0.210 Sum_probs=133.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-------ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~y~aPE~~ 73 (340)
+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++...... ...+|+.|+|||++
T Consensus 107 ~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 185 (287)
T 1u59_A 107 IPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI 185 (287)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHh
Confidence 467889999999999999999999 9999999999999999999999999988664332 22357889999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.+..++.++||||||+++|+|++ |+.||.......+...... .....++..++..+.+++.+||+.||++||++
T Consensus 186 ~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~ 260 (287)
T 1u59_A 186 NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ-----GKRMECPPECPPELYALMSDCWIYKWEDRPDF 260 (287)
T ss_dssp HHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHT-----TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCH
T ss_pred ccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhc-----CCcCCCCCCcCHHHHHHHHHHcCCChhhCcCH
Confidence 88888999999999999999998 9988866443322221111 11223455677899999999999999999999
Q ss_pred HHHHHHhcccccCCCCCc
Q 019495 153 KSLVTALSPLQKETEVPS 170 (340)
Q Consensus 153 ~~i~~~L~~~~~~~~~~~ 170 (340)
.++++.|..+......+.
T Consensus 261 ~~l~~~l~~~~~~~~~~~ 278 (287)
T 1u59_A 261 LTVEQRMRACYYSLASKV 278 (287)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhcCCcc
Confidence 999999998877655433
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-30 Score=239.69 Aligned_cols=143 Identities=17% Similarity=0.159 Sum_probs=115.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-CccccCCcccCcccc-------
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYL------- 73 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~------- 73 (340)
+|..++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++..... ....| +.|+|||++
T Consensus 209 ~~~~~~~i~~qi~~aL~~LH~~~-iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~ 286 (413)
T 3dzo_A 209 VHHARLQLTLQVIRLLASLHHYG-LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPF 286 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTT
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC-cccCCcccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhcccccc
Confidence 46788899999999999999999 999999999999999999999999998765543 33466 999999999
Q ss_pred ---cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC
Q 019495 74 ---RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150 (340)
Q Consensus 74 ---~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 150 (340)
.+..++.++|||||||++|||++|+.||......... ... +. ....++..+.++|.+||+.||++||
T Consensus 287 ~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~----~~~----~~--~~~~~~~~~~~li~~~l~~dP~~Rp 356 (413)
T 3dzo_A 287 GQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGS----EWI----FR--SCKNIPQPVRALLEGFLRYPKEDRL 356 (413)
T ss_dssp GGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCS----GGG----GS--SCCCCCHHHHHHHHHHTCSSGGGSC
T ss_pred ccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhH----HHH----Hh--hcccCCHHHHHHHHHHccCChhhCc
Confidence 4456788999999999999999999998754322111 111 11 1123457899999999999999999
Q ss_pred CHHHHH
Q 019495 151 NPKSLV 156 (340)
Q Consensus 151 s~~~i~ 156 (340)
++.+++
T Consensus 357 t~~~~l 362 (413)
T 3dzo_A 357 LPLQAM 362 (413)
T ss_dssp CHHHHT
T ss_pred CHHHHH
Confidence 976664
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-30 Score=226.67 Aligned_cols=160 Identities=23% Similarity=0.266 Sum_probs=125.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--------CccccCCcccCccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--------KSYSTNLAFTPPEY 72 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--------~~~~~~~~y~aPE~ 72 (340)
+++...+.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||+
T Consensus 125 ~~~~~~~~i~~ql~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 203 (298)
T 3f66_A 125 PTVKDLIGFGLQVAKGMKYLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203 (298)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHH
Confidence 467888999999999999999999 999999999999999999999999998765432 22345778999999
Q ss_pred ccCCCCCCCcceehHHHHHHHHhhCCCCC-CcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 73 LRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 73 ~~~~~~~~~~Di~s~G~il~el~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
+.+..++.++||||||+++|+|++|+.|+ ............... .....+..++..+.+++.+||+.||++|||
T Consensus 204 ~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps 278 (298)
T 3f66_A 204 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG-----RRLLQPEYCPDPLYEVMLKCWHPKAEMRPS 278 (298)
T ss_dssp HHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred hcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcC-----CCCCCCccCCHHHHHHHHHHcCCChhhCcC
Confidence 98888999999999999999999965544 332221111111111 112234445688999999999999999999
Q ss_pred HHHHHHHhcccccCC
Q 019495 152 PKSLVTALSPLQKET 166 (340)
Q Consensus 152 ~~~i~~~L~~~~~~~ 166 (340)
+.++++.|+.+....
T Consensus 279 ~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 279 FSELVSRISAIFSTF 293 (298)
T ss_dssp HHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999886654
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-30 Score=231.77 Aligned_cols=165 Identities=22% Similarity=0.315 Sum_probs=132.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-------ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~y~aPE~~ 73 (340)
+++.+++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++...... ...++..|+|||++
T Consensus 131 ~~~~~~~~i~~~l~~~l~~LH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 209 (318)
T 3lxp_A 131 IGLAQLLLFAQQICEGMAYLHAQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 209 (318)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHh
Confidence 478899999999999999999999 9999999999999999999999999998765432 23467789999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHH----------HhhhhhccccccccCCCCCchhHHHHHHHHHHhhc
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL----------IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 143 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 143 (340)
.+..++.++||||||+++|+|++|+.||....... ..................+..++..+.+++.+||+
T Consensus 210 ~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 289 (318)
T 3lxp_A 210 KEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWE 289 (318)
T ss_dssp HHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred cCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcC
Confidence 98888999999999999999999998875432211 11111112222222334556677899999999999
Q ss_pred cCCCCCCCHHHHHHHhcccccCC
Q 019495 144 YEPRERPNPKSLVTALSPLQKET 166 (340)
Q Consensus 144 ~~p~~Rps~~~i~~~L~~~~~~~ 166 (340)
.||.+|||+.++++.|+.+....
T Consensus 290 ~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 290 TEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp SSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCcccCcCHHHHHHHHHHHHHhh
Confidence 99999999999999998876544
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.8e-30 Score=228.91 Aligned_cols=154 Identities=16% Similarity=0.179 Sum_probs=123.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC----CeEEeccCCCccCCCC---CccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~----~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~ 73 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.++ .+||+|||+++..... ....+|+.|+|||++
T Consensus 111 ~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~ 189 (326)
T 2y0a_A 111 LTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189 (326)
T ss_dssp CBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCC-eEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCccccccCCcCcCCceee
Confidence 467889999999999999999999 99999999999998877 7999999999875433 345689999999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
.+..++.++|||||||++|+|++|..||................. ..........+..+.+++.+||+.||++|||+.
T Consensus 190 ~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 267 (326)
T 2y0a_A 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY--EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQ 267 (326)
T ss_dssp TTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCC--CCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred cCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCC--CcCccccccCCHHHHHHHHHHccCChhhCCCHH
Confidence 988899999999999999999999999876543322221111100 011111223457899999999999999999999
Q ss_pred HHHH
Q 019495 154 SLVT 157 (340)
Q Consensus 154 ~i~~ 157 (340)
++++
T Consensus 268 e~l~ 271 (326)
T 2y0a_A 268 DSLQ 271 (326)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9986
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-30 Score=230.69 Aligned_cols=154 Identities=18% Similarity=0.237 Sum_probs=124.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC--CCCeEEeccCCCccCCCCC---ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE--DGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~--~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~ 75 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++. ++.+||+|||+++...... ...+|+.|+|||++.+
T Consensus 99 ~~~~~~~~i~~qi~~al~~lH~~g-ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~ 177 (321)
T 1tki_A 99 LNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQH 177 (321)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccccccCChhhcCcHHhcC
Confidence 467889999999999999999999 999999999999987 7899999999998765543 3457999999999998
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i 155 (340)
..++.++||||||+++|+|++|..||.......+.......... +.......++..+.+++.+||..||.+|||+.++
T Consensus 178 ~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~ 255 (321)
T 1tki_A 178 DVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYT--FDEEAFKEISIEAMDFVDRLLVKERKSRMTASEA 255 (321)
T ss_dssp CEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--CCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCC--CChhhhccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 88899999999999999999999999775444332222221110 0000112346789999999999999999999999
Q ss_pred HH
Q 019495 156 VT 157 (340)
Q Consensus 156 ~~ 157 (340)
++
T Consensus 256 l~ 257 (321)
T 1tki_A 256 LQ 257 (321)
T ss_dssp HH
T ss_pred hc
Confidence 86
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=225.59 Aligned_cols=150 Identities=20% Similarity=0.289 Sum_probs=120.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.+|.+||+|||+++..... ....||+.|+|||++.+.
T Consensus 118 ~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 196 (327)
T 3a62_A 118 FMEDTACFYLAEISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRS 196 (327)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTSCEEECCCSCC----------CTTSSCCTTSCHHHHTTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EEcccCCHHHeEECCCCcEEEEeCCcccccccCCccccccCCCcCccCHhhCcCC
Confidence 456788899999999999999999 999999999999999999999999998754322 345689999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC-----C
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP-----N 151 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s 151 (340)
.++.++||||||+++|+|++|+.||............... ...++...+..+.+++.+||..||.+|| +
T Consensus 197 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~ 270 (327)
T 3a62_A 197 GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC------KLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGD 270 (327)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT------CCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTT
T ss_pred CCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCC
Confidence 8999999999999999999999999765443332222221 1234455678899999999999999999 6
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.+++.
T Consensus 271 ~~e~l~ 276 (327)
T 3a62_A 271 AGEVQA 276 (327)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 777775
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=7.4e-30 Score=242.74 Aligned_cols=161 Identities=25% Similarity=0.334 Sum_probs=132.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-----CccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~ 75 (340)
+++.+++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++..... ....++..|+|||++.+
T Consensus 360 l~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 438 (535)
T 2h8h_A 360 LRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 438 (535)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCcccccCHHHhcc
Confidence 467889999999999999999999 999999999999999999999999999865432 22345678999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+.++.++|||||||++|||++ |+.||.......+...... ......+..++..+.+||.+||+.||++|||+.+
T Consensus 439 ~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~ 513 (535)
T 2h8h_A 439 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-----GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEY 513 (535)
T ss_dssp CCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHT-----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHH
Confidence 889999999999999999999 8888876543332222111 1222345567789999999999999999999999
Q ss_pred HHHHhcccccCCC
Q 019495 155 LVTALSPLQKETE 167 (340)
Q Consensus 155 i~~~L~~~~~~~~ 167 (340)
|++.|+.+.....
T Consensus 514 l~~~L~~~~~~~~ 526 (535)
T 2h8h_A 514 LQAFLEDYFTSTE 526 (535)
T ss_dssp HHHHHHTSSCCCS
T ss_pred HHHHHHHHhhccC
Confidence 9999999876543
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.7e-30 Score=226.57 Aligned_cols=156 Identities=20% Similarity=0.308 Sum_probs=121.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.+|.+||+|||+++..... ....+|+.|+|||++.+.
T Consensus 105 ~~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~ 183 (317)
T 2pmi_A 105 LELNLVKYFQWQLLQGLAFCHENK-ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGS 183 (317)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCChHHeEEcCCCCEEECcCccceecCCCcccCCCCcccccccCchHhhCC
Confidence 456778889999999999999999 999999999999999999999999998765432 234679999999999764
Q ss_pred -CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccc----------------cc------------cCCCCC
Q 019495 77 -RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD----------------SC------------LEGQFT 127 (340)
Q Consensus 77 -~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~----------------~~------------~~~~~~ 127 (340)
.++.++|||||||++|+|++|+.||.................. +. +....+
T Consensus 184 ~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (317)
T 2pmi_A 184 RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTK 263 (317)
T ss_dssp CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCS
T ss_pred CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhccccc
Confidence 5899999999999999999999998765432221111110000 00 001112
Q ss_pred chhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 128 DDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 128 ~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
...+..+.+++.+||+.||++|||+.++++
T Consensus 264 ~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 264 EPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp SCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 235678999999999999999999999985
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=230.21 Aligned_cols=154 Identities=18% Similarity=0.256 Sum_probs=123.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCC---CCeEEeccCCCccCCCCC---ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~---~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~ 74 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.+ +.+||+|||+++...... ...||+.|+|||++.
T Consensus 125 ~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~ 203 (362)
T 2bdw_A 125 YSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLK 203 (362)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcccccCCCCccccCHHHHc
Confidence 467889999999999999999999 9999999999999764 459999999998765443 357899999999999
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+..++.++|||||||++|+|++|..||.......+.......... +.......++..+.+++.+||+.||++||++.+
T Consensus 204 ~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e 281 (362)
T 2bdw_A 204 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD--YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQ 281 (362)
T ss_dssp TCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred cCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC--CCcccccCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 888999999999999999999999998765443332222111110 111112345688999999999999999999999
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
++.
T Consensus 282 ~l~ 284 (362)
T 2bdw_A 282 ALK 284 (362)
T ss_dssp HTT
T ss_pred Hhc
Confidence 874
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=229.05 Aligned_cols=156 Identities=20% Similarity=0.224 Sum_probs=119.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC-------------------------CCCeEEeccCCCccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-------------------------DGNPRLSTFGLMKNS 55 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~-------------------------~~~~kl~dfg~~~~~ 55 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++. ++.+||+|||+++..
T Consensus 134 ~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~ 212 (360)
T 3llt_A 134 FHIEDIKLYCIEILKALNYLRKMS-LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFK 212 (360)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEET
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceec
Confidence 467788999999999999999999 999999999999975 788999999999865
Q ss_pred CCC-CccccCCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccc---c-------------
Q 019495 56 RDG-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML---T------------- 118 (340)
Q Consensus 56 ~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~---~------------- 118 (340)
... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||................ .
T Consensus 213 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 292 (360)
T 3llt_A 213 SDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGS 292 (360)
T ss_dssp TSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGG
T ss_pred CCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCc
Confidence 443 35678999999999998899999999999999999999999986543221111100000 0
Q ss_pred ----ccccCCCCC--------------------chhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 119 ----DSCLEGQFT--------------------DDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 119 ----~~~~~~~~~--------------------~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.......++ ...+..+.+++.+||+.||++|||+.++++
T Consensus 293 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 293 KYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp GGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000000000 001266889999999999999999999874
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=9.5e-30 Score=226.93 Aligned_cols=157 Identities=18% Similarity=0.281 Sum_probs=127.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCcccccC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~ 75 (340)
++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...+++.|+|||++.+
T Consensus 136 ~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 214 (322)
T 1p4o_A 136 SLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD 214 (322)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC-CccCCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhcc
Confidence 67788999999999999999999 9999999999999999999999999987543321 2345788999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
..++.++||||||+++|+|++ |..||............... .....+..++..+.+++.+||+.||.+|||+.+
T Consensus 215 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e 289 (322)
T 1p4o_A 215 GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG-----GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLE 289 (322)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcC-----CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHH
Confidence 889999999999999999999 77777654333322221111 112234556688999999999999999999999
Q ss_pred HHHHhccccc
Q 019495 155 LVTALSPLQK 164 (340)
Q Consensus 155 i~~~L~~~~~ 164 (340)
+++.|+....
T Consensus 290 ~l~~L~~~~~ 299 (322)
T 1p4o_A 290 IISSIKEEME 299 (322)
T ss_dssp HHHHHGGGSC
T ss_pred HHHHHHHhhc
Confidence 9999988754
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-30 Score=232.17 Aligned_cols=156 Identities=20% Similarity=0.151 Sum_probs=112.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCC--eEEeccCCCccCCCC---CccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN--PRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~--~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~ 75 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++. +||+|||+++..... ....||+.|+|||++.+
T Consensus 113 ~~~~~~~~i~~ql~~~L~~LH~~~-ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~ 191 (361)
T 3uc3_A 113 FSEDEARFFFQQLLSGVSYCHSMQ-ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLR 191 (361)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCSCCCCGGGEEECSSSSCCEEECCCCCC---------------CTTSCHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCCcCCCCcCChhhhcC
Confidence 467889999999999999999999 999999999999987665 999999998743322 34578999999999987
Q ss_pred CCCCCC-cceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPE-SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~-~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
..++.+ +|||||||++|+|++|+.||...............+.............+..+.++|.+||+.||.+|||+.+
T Consensus 192 ~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~e 271 (361)
T 3uc3_A 192 QEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPE 271 (361)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred CCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHH
Confidence 776555 8999999999999999999865322111111111111111111122245688999999999999999999999
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
+++
T Consensus 272 ll~ 274 (361)
T 3uc3_A 272 IKT 274 (361)
T ss_dssp HHT
T ss_pred HHh
Confidence 986
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6e-30 Score=225.04 Aligned_cols=160 Identities=18% Similarity=0.241 Sum_probs=130.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc-------cccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-------YSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~-------~~~~~~y~aPE~~ 73 (340)
+++.....++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++....... ..+++.|+|||++
T Consensus 114 ~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 192 (291)
T 1xbb_A 114 VKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 192 (291)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHh
Confidence 467889999999999999999999 99999999999999999999999999876544321 2346789999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.+..++.++||||||+++|+|++ |..||.......+...... ......+..++..+.+++.+||+.||++||++
T Consensus 193 ~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~ 267 (291)
T 1xbb_A 193 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK-----GERMGCPAGCPREMYDLMNLCWTYDVENRPGF 267 (291)
T ss_dssp HHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-----TCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred ccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence 88888999999999999999999 9988876543332221111 11223455667899999999999999999999
Q ss_pred HHHHHHhcccccCC
Q 019495 153 KSLVTALSPLQKET 166 (340)
Q Consensus 153 ~~i~~~L~~~~~~~ 166 (340)
.++++.|+.+....
T Consensus 268 ~~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 268 AAVELRLRNYYYDV 281 (291)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999886543
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-29 Score=228.80 Aligned_cols=153 Identities=16% Similarity=0.245 Sum_probs=121.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccC--
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRT-- 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~-- 75 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.+|.+||+|||+++..... ....||+.|+|||++.+
T Consensus 112 l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~ 190 (384)
T 4fr4_A 112 FKEETVKLFICELVMALDYLQNQR-IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRK 190 (384)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEECCCCCEEEeccceeeeccCCCceeccCCCccccCCeeeccCC
Confidence 467788999999999999999999 999999999999999999999999999865443 35678999999999974
Q ss_pred -CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC-HH
Q 019495 76 -GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN-PK 153 (340)
Q Consensus 76 -~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps-~~ 153 (340)
..++.++|||||||++|+|++|+.||.......... ....+. .....++..++..+.++|.+||+.||.+||+ +.
T Consensus 191 ~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~-~~~~~~--~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~ 267 (384)
T 4fr4_A 191 GAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKE-IVHTFE--TTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLS 267 (384)
T ss_dssp SCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHH-HHHHHH--HCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHH
T ss_pred CCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHH-HHHHHh--hcccCCCCcCCHHHHHHHHHHhcCCHhHhcccHH
Confidence 358999999999999999999999986432111110 001100 0122345566789999999999999999998 77
Q ss_pred HHHH
Q 019495 154 SLVT 157 (340)
Q Consensus 154 ~i~~ 157 (340)
+++.
T Consensus 268 ~l~~ 271 (384)
T 4fr4_A 268 DVQN 271 (384)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 7664
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.5e-30 Score=234.38 Aligned_cols=156 Identities=22% Similarity=0.301 Sum_probs=122.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEec-CCCCeEEeccCCCccCCCC---CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~-~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++ .++.+||+|||+++..... ....+|+.|+|||++.+.
T Consensus 138 ~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~ 216 (394)
T 4e7w_A 138 MPMLLIKLYMYQLLRSLAYIHSIG-ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGA 216 (394)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCCCcccccCcCccCHHHHcCC
Confidence 467788899999999999999999 99999999999998 7899999999999865333 345789999999998764
Q ss_pred -CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccc-----------------------cccccCCCCCchhHH
Q 019495 77 -RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML-----------------------TDSCLEGQFTDDDGT 132 (340)
Q Consensus 77 -~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~ 132 (340)
.++.++|||||||++|||++|+.||.+.............+ ....+...++...++
T Consensus 217 ~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (394)
T 4e7w_A 217 TNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPP 296 (394)
T ss_dssp SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCH
T ss_pred CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCH
Confidence 58999999999999999999999997653322111111100 000001112334567
Q ss_pred HHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 133 ELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 133 ~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.+.+++.+||+.||.+|||+.+++.
T Consensus 297 ~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 297 DAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHhCCChhhCCCHHHHhc
Confidence 8999999999999999999999985
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.6e-30 Score=227.15 Aligned_cols=153 Identities=18% Similarity=0.194 Sum_probs=120.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
+++.++..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....||+.|+|||++.
T Consensus 102 ~~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 180 (323)
T 3tki_A 102 MPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180 (323)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhc
Confidence 467889999999999999999999 999999999999999999999999998754321 2456899999999998
Q ss_pred CCCC-CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~-~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..+ +.++|||||||++|+|++|+.||............... ..........++..+.+++.+||+.||++|||+.
T Consensus 181 ~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ 257 (323)
T 3tki_A 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE---KKTYLNPWKKIDSAPLALLHKILVENPSARITIP 257 (323)
T ss_dssp CSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHT---TCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred cCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc---ccccCCccccCCHHHHHHHHHHccCChhhCcCHH
Confidence 7664 77899999999999999999998654321111111111 0111111234568899999999999999999999
Q ss_pred HHHH
Q 019495 154 SLVT 157 (340)
Q Consensus 154 ~i~~ 157 (340)
++++
T Consensus 258 eil~ 261 (323)
T 3tki_A 258 DIKK 261 (323)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 9985
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=245.64 Aligned_cols=150 Identities=19% Similarity=0.314 Sum_probs=126.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC----CCccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~ 76 (340)
+++..+..++.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+++.... ..+..||+.|+|||++.+.
T Consensus 439 ~~~~~~~~~~~qi~~aL~~LH~~g-IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 517 (674)
T 3pfq_A 439 FKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQ 517 (674)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTS-EECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eEeccCChhhEEEcCCCcEEEeecceeeccccCCcccccccCCCcccCHhhhcCC
Confidence 467888999999999999999999 99999999999999999999999999885322 2356789999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH----
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP---- 152 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~---- 152 (340)
.++.++|+|||||++|||++|+.||.......+....... ...+|...+.++.+||.+||+.||++||++
T Consensus 518 ~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~ 591 (674)
T 3pfq_A 518 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEG 591 (674)
T ss_dssp CBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSS------CCCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTH
T ss_pred CCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHHHHHHHHHccCCHHHCCCCCCCc
Confidence 9999999999999999999999999876554443333222 223556677899999999999999999997
Q ss_pred -HHHHH
Q 019495 153 -KSLVT 157 (340)
Q Consensus 153 -~~i~~ 157 (340)
.+|++
T Consensus 592 ~~ei~~ 597 (674)
T 3pfq_A 592 ERDIKE 597 (674)
T ss_dssp HHHHHS
T ss_pred HHHHhc
Confidence 66653
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.7e-30 Score=227.50 Aligned_cols=161 Identities=20% Similarity=0.281 Sum_probs=129.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC---CCccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---GKSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~---~~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.++..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++.... .....+++.|+|||++.+..
T Consensus 139 ~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 217 (327)
T 1fvr_A 139 LSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSV 217 (327)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCE
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCccceEEEcCCCeEEEcccCcCccccccccccCCCCCccccChhhhcccc
Confidence 467888999999999999999999 99999999999999999999999999874332 12334578899999998888
Q ss_pred CCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
++.++||||||+++|+|++ |+.||.......+...... ......+..++..+.+++.+||+.||.+|||+.+++
T Consensus 218 ~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 292 (327)
T 1fvr_A 218 YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-----GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 292 (327)
T ss_dssp ECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGG-----TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhc-----CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 8999999999999999998 9988876544333222211 122234556678999999999999999999999999
Q ss_pred HHhcccccCCC
Q 019495 157 TALSPLQKETE 167 (340)
Q Consensus 157 ~~L~~~~~~~~ 167 (340)
+.|..+.....
T Consensus 293 ~~L~~~~~~~~ 303 (327)
T 1fvr_A 293 VSLNRMLEERK 303 (327)
T ss_dssp HHHHHHHHSSS
T ss_pred HHHHHHHHhhc
Confidence 99988766543
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.6e-30 Score=226.27 Aligned_cols=159 Identities=17% Similarity=0.261 Sum_probs=119.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-------CccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-------KSYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~y~aPE~~ 73 (340)
+++.+...++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....||+.|+|||++
T Consensus 113 ~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 191 (311)
T 3ork_A 113 MTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191 (311)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEETTSCEEECCCSCC------------------CCTTCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHh
Confidence 467889999999999999999999 999999999999999999999999998765432 224579999999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
.+..++.++||||||+++|+|++|+.||..................+ .......++..+.+++.+||+.||++||+..
T Consensus 192 ~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~ 269 (311)
T 3ork_A 192 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP--PSARHEGLSADLDAVVLKALAKNPENRYQTA 269 (311)
T ss_dssp HTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCC--HHHHSTTCCHHHHHHHHHHTCSSGGGSCSSH
T ss_pred cCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC--cccccCCCCHHHHHHHHHHHhcCHhhChhhH
Confidence 98889999999999999999999999997654433322222211110 0011223557899999999999999999766
Q ss_pred HH-HHHhccc
Q 019495 154 SL-VTALSPL 162 (340)
Q Consensus 154 ~i-~~~L~~~ 162 (340)
++ .+.+...
T Consensus 270 ~~l~~~l~~~ 279 (311)
T 3ork_A 270 AEMRADLVRV 279 (311)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 64 4555544
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-29 Score=226.00 Aligned_cols=161 Identities=11% Similarity=0.104 Sum_probs=125.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEe----cCCCCeEEeccCCCccCCCCC---ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF----DEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill----~~~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~ 73 (340)
+++.++..++.||+.||.|||+++ |+||||||+||++ +.++.+||+|||+++...... ...+|+.|+|||++
T Consensus 109 ~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~ 187 (319)
T 4euu_A 109 LPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMY 187 (319)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCceeecccCCCccCHHHh
Confidence 478889999999999999999999 9999999999999 777789999999998765443 34689999999998
Q ss_pred c--------CCCCCCCcceehHHHHHHHHhhCCCCCCcchh----HHHhhhhhccccc-------------------ccc
Q 019495 74 R--------TGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNLQMLTD-------------------SCL 122 (340)
Q Consensus 74 ~--------~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~----~~~~~~~~~~~~~-------------------~~~ 122 (340)
. +..++.++|||||||++|||++|+.||..... ...........+. ...
T Consensus 188 ~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 267 (319)
T 4euu_A 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPV 267 (319)
T ss_dssp HHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCT
T ss_pred hhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCc
Confidence 6 46789999999999999999999998853211 1111111111100 011
Q ss_pred CCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 019495 123 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 162 (340)
Q Consensus 123 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~ 162 (340)
...++...+..+.+++.+||+.||++|||+.++++.....
T Consensus 268 ~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 268 SCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp TCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred ccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 1234456788999999999999999999999999876644
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-29 Score=228.27 Aligned_cols=155 Identities=17% Similarity=0.267 Sum_probs=123.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-CccccCCcccCcccccC-CCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRT-GRV 78 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~-~~~ 78 (340)
+++.....++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||++.+ ..+
T Consensus 125 l~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 203 (367)
T 1cm8_A 125 LGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRY 203 (367)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCHHHEEEcCCCCEEEEeeecccccccccCcCcCCCCcCCHHHHhCCCCC
Confidence 467788899999999999999999 999999999999999999999999999875543 34578999999999887 578
Q ss_pred CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcc--------------------------ccccccCCCCCchhHH
Q 019495 79 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM--------------------------LTDSCLEGQFTDDDGT 132 (340)
Q Consensus 79 ~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~ 132 (340)
+.++||||+||++|+|++|+.||.+............. .....+ .......++
T Consensus 204 ~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 282 (367)
T 1cm8_A 204 TQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDF-ASILTNASP 282 (367)
T ss_dssp CTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCG-GGTCTTCCH
T ss_pred ChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCH-HHHCCCCCH
Confidence 99999999999999999999998764322111111000 000000 112234568
Q ss_pred HHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 133 ELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 133 ~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.+.+++.+||..||++|||+.+++.
T Consensus 283 ~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 283 LAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHHccCChhHCCCHHHHhc
Confidence 8999999999999999999999986
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.6e-30 Score=221.39 Aligned_cols=158 Identities=19% Similarity=0.301 Sum_probs=128.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-----CccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~ 75 (340)
+++..+..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++...... ....++..|+|||++.+
T Consensus 101 ~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 179 (267)
T 3t9t_A 101 FAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF 179 (267)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEECCCCCEEEcccccccccccccccccccccccccccChhhhcC
Confidence 467889999999999999999999 999999999999999999999999998765432 23345678999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
..++.++||||||+++|+|++ |..||............... .....+...+..+.+++.+||+.||++||++.+
T Consensus 180 ~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ 254 (267)
T 3t9t_A 180 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-----FRLYKPRLASTHVYQIMNHCWRERPEDRPAFSR 254 (267)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-----CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcC-----CcCCCCccCcHHHHHHHHHHccCChhhCcCHHH
Confidence 889999999999999999999 78887654433322221111 122234455688999999999999999999999
Q ss_pred HHHHhccccc
Q 019495 155 LVTALSPLQK 164 (340)
Q Consensus 155 i~~~L~~~~~ 164 (340)
+++.|+.+..
T Consensus 255 ll~~L~~l~~ 264 (267)
T 3t9t_A 255 LLRQLAEIAE 264 (267)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999988754
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.6e-30 Score=246.13 Aligned_cols=160 Identities=18% Similarity=0.218 Sum_probs=129.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc-------cccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-------YSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~-------~~~~~~y~aPE~~ 73 (340)
+++.+++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++....... ..+++.|+|||++
T Consensus 433 l~~~~~~~i~~qi~~~L~~LH~~~-iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~ 511 (613)
T 2ozo_A 433 IPVSNVAELLHQVSMGMKYLEEKN-FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI 511 (613)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhh
Confidence 478899999999999999999999 99999999999999999999999999987543321 1245789999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.++.++.++|||||||++|||++ |+.||.......+...... ......+..++..+.++|.+||+.||++||++
T Consensus 512 ~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~-----~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~ 586 (613)
T 2ozo_A 512 NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ-----GKRMECPPECPPELYALMSDCWIYKWEDRPDF 586 (613)
T ss_dssp HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHT-----TCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCH
T ss_pred cCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCcCCHHHHHHHHHHcCCChhHCcCH
Confidence 98889999999999999999998 9988876543332221111 12234556677899999999999999999999
Q ss_pred HHHHHHhcccccCC
Q 019495 153 KSLVTALSPLQKET 166 (340)
Q Consensus 153 ~~i~~~L~~~~~~~ 166 (340)
.+|++.|+.+....
T Consensus 587 ~~l~~~L~~~~~~~ 600 (613)
T 2ozo_A 587 LTVEQRMRACYYSL 600 (613)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999998876544
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=219.11 Aligned_cols=159 Identities=18% Similarity=0.245 Sum_probs=128.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-CccccCCCCCCEEecCCCCeEEeccCCCccCCCCCccccCCcccCcccccCCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVT 79 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~-~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 79 (340)
+++..+..++.||+.||.|||+.+ .++||||||+||+++.++.++++|||+...... ....+|+.|+|||++.+...+
T Consensus 108 ~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~-~~~~~t~~y~aPE~~~~~~~~ 186 (271)
T 3kmu_A 108 VDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-PGRMYAPAWVAPEALQKKPED 186 (271)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC-TTCBSCGGGSCHHHHHSCGGG
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecc-cCccCCccccChhhhccCCCC
Confidence 478899999999999999999964 499999999999999999999999887654332 345778999999999875544
Q ss_pred C---CcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 80 P---ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 80 ~---~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
. ++||||||+++|+|++|+.||............... ......+..++..+.+++.+||+.||++|||+.+++
T Consensus 187 ~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il 262 (271)
T 3kmu_A 187 TNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALE----GLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIV 262 (271)
T ss_dssp SCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHS----CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhc----CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 4 799999999999999999998765443332222211 223344556778999999999999999999999999
Q ss_pred HHhccccc
Q 019495 157 TALSPLQK 164 (340)
Q Consensus 157 ~~L~~~~~ 164 (340)
+.|+.+..
T Consensus 263 ~~L~~l~~ 270 (271)
T 3kmu_A 263 PILEKMQD 270 (271)
T ss_dssp HHHHHHCC
T ss_pred HHHHHhhc
Confidence 99987743
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-29 Score=235.31 Aligned_cols=162 Identities=17% Similarity=0.256 Sum_probs=116.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----------------------
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---------------------- 58 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---------------------- 58 (340)
|++.....++.||+.||.|||+.+ ||||||||+|||++.++.+||+|||+++.....
T Consensus 153 l~~~~~~~~~~qi~~aL~~LH~~~-iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (458)
T 3rp9_A 153 LTELHIKTLLYNLLVGVKYVHSAG-ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFP 231 (458)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC--------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-cCCCCCChhhEEECCCCCEeecccccchhccCccccccccccCcccccccccccc
Confidence 467888999999999999999999 999999999999999999999999999865321
Q ss_pred ---------CccccCCcccCcccc-cCCCCCCCcceehHHHHHHHHhh-----------CCCCCCcchhH----------
Q 019495 59 ---------KSYSTNLAFTPPEYL-RTGRVTPESVIYSFGTLLLDLLS-----------GKHIPPSHALD---------- 107 (340)
Q Consensus 59 ---------~~~~~~~~y~aPE~~-~~~~~~~~~Di~s~G~il~el~~-----------g~~~~~~~~~~---------- 107 (340)
....||+.|+|||++ .+..++.++|||||||++|||++ |+++|++....
T Consensus 232 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~ 311 (458)
T 3rp9_A 232 HTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGN 311 (458)
T ss_dssp -------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC---------------
T ss_pred ccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccc
Confidence 233569999999986 44669999999999999999999 55556543210
Q ss_pred -----------HHhh---------------------hhhccccccccC---CCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 108 -----------LIRD---------------------RNLQMLTDSCLE---GQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 108 -----------~~~~---------------------~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.+.. .......+.... ....+..+..+.+||.+||..||++|||+
T Consensus 312 ~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~ 391 (458)
T 3rp9_A 312 DFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITI 391 (458)
T ss_dssp -----CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred cccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCH
Confidence 0000 000000000000 01112346889999999999999999999
Q ss_pred HHHHHHhcccccC
Q 019495 153 KSLVTALSPLQKE 165 (340)
Q Consensus 153 ~~i~~~L~~~~~~ 165 (340)
.++++ +++...
T Consensus 392 ~e~L~--Hp~f~~ 402 (458)
T 3rp9_A 392 NECLA--HPFFKE 402 (458)
T ss_dssp HHHHH--SGGGTT
T ss_pred HHHhc--CHhhhh
Confidence 99997 444443
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=4.6e-30 Score=228.23 Aligned_cols=158 Identities=25% Similarity=0.344 Sum_probs=127.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCcccccC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~ 75 (340)
++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...+|+.|+|||++.+
T Consensus 146 ~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~ 224 (316)
T 2xir_A 146 TLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD 224 (316)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhcc
Confidence 56788999999999999999999 9999999999999999999999999987654332 2345788999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
..++.++||||||+++|+|++ |..||............... ......+..+++.+.+++.+||+.||.+|||+.+
T Consensus 225 ~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e 300 (316)
T 2xir_A 225 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE----GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSE 300 (316)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHH----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred ccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhcc----CccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 889999999999999999998 88887654322111111111 1112334455688999999999999999999999
Q ss_pred HHHHhccccc
Q 019495 155 LVTALSPLQK 164 (340)
Q Consensus 155 i~~~L~~~~~ 164 (340)
+++.|+.+..
T Consensus 301 ll~~L~~~~~ 310 (316)
T 2xir_A 301 LVEHLGNLLQ 310 (316)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999987754
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-30 Score=231.34 Aligned_cols=158 Identities=18% Similarity=0.273 Sum_probs=126.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++...+.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...+++.|+|||++.
T Consensus 161 ~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 239 (333)
T 2i1m_A 161 ASTRDLLHFSSQVAQGMAFLASKN-CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF 239 (333)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHhcCC-cccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhc
Confidence 367788999999999999999999 9999999999999999999999999987543322 234577899999998
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++||||||+++|+|++ |..||.............. .......+..++..+.+++.+||+.||.+|||+.
T Consensus 240 ~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ 315 (333)
T 2i1m_A 240 DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK----DGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQ 315 (333)
T ss_dssp HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHH----HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred cCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHh----cCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHH
Confidence 8889999999999999999999 8777765432211111111 1112233444568899999999999999999999
Q ss_pred HHHHHhcccc
Q 019495 154 SLVTALSPLQ 163 (340)
Q Consensus 154 ~i~~~L~~~~ 163 (340)
++++.|+.+.
T Consensus 316 ~l~~~L~~~~ 325 (333)
T 2i1m_A 316 QICSFLQEQA 325 (333)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998764
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.5e-30 Score=228.38 Aligned_cols=158 Identities=18% Similarity=0.208 Sum_probs=112.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-CccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----------------cccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----------------SYST 63 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~-~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----------------~~~~ 63 (340)
+++.++..++.||+.||.|||+.+ +|+||||||+||+++.++.+||+|||+++...... ...+
T Consensus 133 ~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (337)
T 3ll6_A 133 LSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNT 212 (337)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC--------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccC
Confidence 578899999999999999999985 49999999999999999999999999988654321 2347
Q ss_pred CCcccCcccc---cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHH
Q 019495 64 NLAFTPPEYL---RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 140 (340)
Q Consensus 64 ~~~y~aPE~~---~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 140 (340)
|+.|+|||++ .+..++.++||||||+++|+|++|+.||.......+... ......+...+..+.+++.+
T Consensus 213 t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~li~~ 284 (337)
T 3ll6_A 213 TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNG--------KYSIPPHDTQYTVFHSLIRA 284 (337)
T ss_dssp -----------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------------------CCCCTTCCSSGGGHHHHHH
T ss_pred CCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcC--------cccCCcccccchHHHHHHHH
Confidence 8999999998 456688999999999999999999999865432221111 11112223344668999999
Q ss_pred hhccCCCCCCCHHHHHHHhcccccCC
Q 019495 141 CLQYEPRERPNPKSLVTALSPLQKET 166 (340)
Q Consensus 141 cl~~~p~~Rps~~~i~~~L~~~~~~~ 166 (340)
||+.||.+||++.++++.|..+....
T Consensus 285 ~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 285 MLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp HSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HccCChhhCcCHHHHHHHHHHHHhcc
Confidence 99999999999999999998886554
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=9.4e-30 Score=235.19 Aligned_cols=156 Identities=24% Similarity=0.313 Sum_probs=120.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCC-CCeEEeccCCCccCCCC---CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~-~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~ 76 (340)
|++.....++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++..... ....+|+.|+|||++.+.
T Consensus 153 l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~ 231 (420)
T 1j1b_A 153 LPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 231 (420)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChhhEEEeCCCCeEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcCC
Confidence 467788899999999999999999 9999999999999965 56899999999865433 345789999999999764
Q ss_pred -CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcc-----------cccc----cc--------CCCCCchhHH
Q 019495 77 -RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM-----------LTDS----CL--------EGQFTDDDGT 132 (340)
Q Consensus 77 -~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~-----------~~~~----~~--------~~~~~~~~~~ 132 (340)
.++.++|||||||++|||++|+.||.+..........+.. ..+. .+ ...++...+.
T Consensus 232 ~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 311 (420)
T 1j1b_A 232 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPP 311 (420)
T ss_dssp SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCH
T ss_pred CCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCH
Confidence 6899999999999999999999999765322111111110 0000 00 0012334568
Q ss_pred HHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 133 ELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 133 ~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.+.+|+.+||+.||.+||++.+++.
T Consensus 312 ~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 312 EAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHhccCChhHCCCHHHHhC
Confidence 8999999999999999999999985
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-29 Score=222.51 Aligned_cols=162 Identities=18% Similarity=0.234 Sum_probs=121.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-----CccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~ 75 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||++...... ....+++.|+|||++.+
T Consensus 131 ~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 209 (309)
T 2h34_A 131 LAPPRAVAIVRQIGSALDAAHAAG-ATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSE 209 (309)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSCCC----------------CCGGGCCGGGTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCc-CCcCCCChHHEEEcCCCCEEEecCccCccccccccccccccCCCcCccCHHHHcC
Confidence 467889999999999999999999 999999999999999999999999998765433 23467899999999998
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC-CHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP-NPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-s~~~ 154 (340)
..++.++||||||+++|+|++|+.||.......+.......... ....+..++..+.+++.+||+.||++|| ++.+
T Consensus 210 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~ 286 (309)
T 2h34_A 210 SHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPR---PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGD 286 (309)
T ss_dssp ----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCC---GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHH
T ss_pred CCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCC---ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHH
Confidence 88999999999999999999999998776544332222111111 1123445567899999999999999999 9999
Q ss_pred HHHHhcccccCC
Q 019495 155 LVTALSPLQKET 166 (340)
Q Consensus 155 i~~~L~~~~~~~ 166 (340)
+++.|+......
T Consensus 287 l~~~l~~~l~~~ 298 (309)
T 2h34_A 287 LSAAAHAALATA 298 (309)
T ss_dssp HHHHHHHTCC--
T ss_pred HHHHHHHHHHhh
Confidence 999998775543
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=228.30 Aligned_cols=153 Identities=18% Similarity=0.219 Sum_probs=120.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCC---eEEeccCCCccCCCCC----ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLMKNSRDGK----SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~---~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~ 73 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++. +||+|||+++...... ...+|+.|+|||++
T Consensus 127 ~~~~~~~~i~~qi~~al~~lH~~~-ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~ 205 (351)
T 3c0i_A 127 YSEAVASHYMRQILEALRYCHDNN-IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205 (351)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHH
Confidence 367788899999999999999999 999999999999976554 9999999998765432 34689999999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
.+..++.++|||||||++|+|++|..||.......... ....... ........++..+.++|.+||+.||++|||+.
T Consensus 206 ~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~-i~~~~~~--~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~ 282 (351)
T 3c0i_A 206 KREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEG-IIKGKYK--MNPRQWSHISESAKDLVRRMLMLDPAERITVY 282 (351)
T ss_dssp TTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHH-HHHTCCC--CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred cCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHH-HHcCCCC--CCccccccCCHHHHHHHHHHCCCChhHCcCHH
Confidence 98889999999999999999999999987653222111 1111000 00001123457899999999999999999999
Q ss_pred HHHH
Q 019495 154 SLVT 157 (340)
Q Consensus 154 ~i~~ 157 (340)
++++
T Consensus 283 e~l~ 286 (351)
T 3c0i_A 283 EALN 286 (351)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9985
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-30 Score=227.88 Aligned_cols=162 Identities=19% Similarity=0.321 Sum_probs=127.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-------ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~y~aPE~~ 73 (340)
+++.++..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...+|..|+|||++
T Consensus 123 ~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 201 (302)
T 4e5w_A 123 INLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECL 201 (302)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhhcCC-cccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeee
Confidence 467889999999999999999999 9999999999999999999999999988655432 23467789999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHH----------hhhhhccccccccCCCCCchhHHHHHHHHHHhhc
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI----------RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 143 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 143 (340)
.+..++.++||||||+++|+|++|..|+........ .................+..++..+.+++.+||+
T Consensus 202 ~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 281 (302)
T 4e5w_A 202 MQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWE 281 (302)
T ss_dssp HHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTC
T ss_pred cCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcC
Confidence 888889999999999999999999876533211100 0011111111122233455677899999999999
Q ss_pred cCCCCCCCHHHHHHHhcccc
Q 019495 144 YEPRERPNPKSLVTALSPLQ 163 (340)
Q Consensus 144 ~~p~~Rps~~~i~~~L~~~~ 163 (340)
.||.+|||+.++++.|+.+.
T Consensus 282 ~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 282 FQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp SSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHh
Confidence 99999999999999998753
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=226.26 Aligned_cols=144 Identities=23% Similarity=0.267 Sum_probs=121.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC---ccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~~~ 77 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...||+.|+|||++.+..
T Consensus 127 l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 205 (335)
T 3dls_A 127 LDEPLASYIFRQLVSAVGYLRLKD-IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNP 205 (335)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eEEeccCHHHEEEcCCCcEEEeecccceECCCCCceeccCCCccccChhhhcCCC
Confidence 467889999999999999999999 9999999999999999999999999998765443 346899999999998776
Q ss_pred C-CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 78 V-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 78 ~-~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
+ +.++||||||+++|+|++|..||..... .... ....+..++..+.+++.+||+.||++|||+.+++
T Consensus 206 ~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~------~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell 273 (335)
T 3dls_A 206 YRGPELEMWSLGVTLYTLVFEENPFCELEE------TVEA------AIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLV 273 (335)
T ss_dssp BCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------GTTT------CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCCcccchhHHHHHHHHHhCCCchhhHHH------HHhh------ccCCCcccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 6 7889999999999999999998864211 1111 1122334568899999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
+
T Consensus 274 ~ 274 (335)
T 3dls_A 274 T 274 (335)
T ss_dssp H
T ss_pred c
Confidence 6
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-29 Score=219.52 Aligned_cols=150 Identities=19% Similarity=0.304 Sum_probs=124.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--CccccCCcccCcccccCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTGRV 78 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~~ 78 (340)
+++.....++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++...... ....+++.|+|||++.+..+
T Consensus 111 ~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 189 (284)
T 2vgo_A 111 FDEQRSATFMEELADALHYCHERK-VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTH 189 (284)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCCCCSCGGGCCHHHHTTCCB
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEEcCCCCEEEecccccccCcccccccccCCCCcCCHHHhccCCC
Confidence 467888999999999999999999 999999999999999999999999998765432 34568999999999998889
Q ss_pred CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 79 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 79 ~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+.++||||||+++|+|++|..||............... ...++...+..+.+++.+||+.||.+||++.++++
T Consensus 190 ~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 190 DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV------DLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp CTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT------CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcc------ccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 99999999999999999999998765433322221111 12344556688999999999999999999999985
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=5e-30 Score=224.44 Aligned_cols=157 Identities=20% Similarity=0.346 Sum_probs=127.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||++...... ....+++.|+|||++.+..
T Consensus 119 ~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 197 (284)
T 2a19_B 119 LDKVLALELFEQITKGVDYIHSKK-LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQD 197 (284)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHEEEcCCCCEEECcchhheeccccccccccCCcccccChhhhccCC
Confidence 467889999999999999999999 999999999999999999999999998766543 2346889999999999888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
++.++||||||+++|+|++|..|+..... ....+. ...++...+..+.+++.+||+.||.+|||+.++++
T Consensus 198 ~~~~~Di~slG~il~~l~~~~~~~~~~~~------~~~~~~----~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 267 (284)
T 2a19_B 198 YGKEVDLYALGLILAELLHVCDTAFETSK------FFTDLR----DGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILR 267 (284)
T ss_dssp CCTHHHHHHHHHHHHHHHSCCSSHHHHHH------HHHHHH----TTCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CcchhhhHHHHHHHHHHHhcCCcchhHHH------HHHHhh----cccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99999999999999999999877643211 111111 11223345578999999999999999999999999
Q ss_pred HhcccccCCCC
Q 019495 158 ALSPLQKETEV 168 (340)
Q Consensus 158 ~L~~~~~~~~~ 168 (340)
.|..+......
T Consensus 268 ~l~~~~~~~~~ 278 (284)
T 2a19_B 268 TLTVWKKSPEK 278 (284)
T ss_dssp HHHHHTC----
T ss_pred HHHHHhhCCCc
Confidence 99988766543
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-29 Score=229.79 Aligned_cols=156 Identities=15% Similarity=0.217 Sum_probs=114.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||++.+..
T Consensus 124 ~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 202 (371)
T 2xrw_A 124 LDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 202 (371)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCC----------------CTTCCHHHHTTCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEEEeecccccccccccCCceecCCccCHHHhcCCC
Confidence 467788899999999999999999 999999999999999999999999999865543 2456899999999999888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccc---------------------------------ccCC
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS---------------------------------CLEG 124 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~ 124 (340)
++.++|||||||++|+|++|+.||.+.............+..+ ...+
T Consensus 203 ~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (371)
T 2xrw_A 203 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFP 282 (371)
T ss_dssp CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSC
T ss_pred CCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCc
Confidence 9999999999999999999999987643322111111110000 0000
Q ss_pred C---CCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 125 Q---FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 125 ~---~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
. .+...+..+.+++.+||+.||++|||+.++++
T Consensus 283 ~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 283 ADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp CSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0 00123678999999999999999999999986
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-29 Score=234.86 Aligned_cols=150 Identities=20% Similarity=0.305 Sum_probs=124.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... .+..||+.|+|||++.+..
T Consensus 113 l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 191 (476)
T 2y94_A 113 LDEKESRRLFQQILSGVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRL 191 (476)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-CCcccccHHHEEEecCCCeEEEeccchhhccccccccccCCCcCeEChhhccCCC
Confidence 467889999999999999999999 999999999999999999999999999876543 2457899999999998766
Q ss_pred C-CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 78 V-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 78 ~-~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
+ +.++|||||||++|+|++|+.||.......+........ ...+...++.+.+++.+||+.||.+|||+.+++
T Consensus 192 ~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~------~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil 265 (476)
T 2y94_A 192 YAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI------FYTPQYLNPSVISLLKHMLQVDPMKRATIKDIR 265 (476)
T ss_dssp BCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTC------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC------cCCCccCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence 4 679999999999999999999987654433322222211 123444568899999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
+
T Consensus 266 ~ 266 (476)
T 2y94_A 266 E 266 (476)
T ss_dssp T
T ss_pred h
Confidence 6
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-29 Score=227.90 Aligned_cols=155 Identities=19% Similarity=0.246 Sum_probs=115.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC---CCCeEEeccCCCccCCCC---CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~---~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~ 74 (340)
+++.++..++.||+.||.|||+++ |+||||||+||+++. ++.+||+|||+++..... ....||+.|+|||++.
T Consensus 145 ~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~ 223 (349)
T 2w4o_A 145 YSERDAADAVKQILEAVAYLHENG-IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILR 223 (349)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESSSSTTCCEEECCCC----------------CGGGSCHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCcccEEEecCCCCCCEEEccCccccccCcccccccccCCCCccCHHHhc
Confidence 467889999999999999999999 999999999999975 889999999998865433 2456899999999999
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+..++.++|||||||++|+|++|..||............+.... ...........+..+.+++.+||+.||++|||+.+
T Consensus 224 ~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 302 (349)
T 2w4o_A 224 GCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCE-YYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQ 302 (349)
T ss_dssp TCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTC-CCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred CCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCC-CccCCchhhhCCHHHHHHHHHHccCChhhCcCHHH
Confidence 88899999999999999999999999865433221111111100 01111223456688999999999999999999999
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
+++
T Consensus 303 ~l~ 305 (349)
T 2w4o_A 303 ALQ 305 (349)
T ss_dssp HHH
T ss_pred Hhc
Confidence 986
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-29 Score=225.40 Aligned_cols=150 Identities=19% Similarity=0.244 Sum_probs=124.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.++..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+++.|+|||++.+.
T Consensus 138 l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 216 (335)
T 2owb_A 138 LTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 216 (335)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-CEecCCCchhEEEcCCCCEEEeeccCceecccCcccccccCCCccccCHHHhccC
Confidence 467889999999999999999999 999999999999999999999999998765422 234678999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++||||||+++|+|++|+.||............... ...++..++..+.+++.+||+.||++||++.+++
T Consensus 217 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 290 (335)
T 2owb_A 217 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN------EYSIPKHINPVAASLIQKMLQTDPTARPTINELL 290 (335)
T ss_dssp CBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGG
T ss_pred CCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcC------CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHh
Confidence 8999999999999999999999998765433222111111 1123445668899999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
+
T Consensus 291 ~ 291 (335)
T 2owb_A 291 N 291 (335)
T ss_dssp G
T ss_pred c
Confidence 6
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-29 Score=219.28 Aligned_cols=154 Identities=18% Similarity=0.258 Sum_probs=124.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCC---eEEeccCCCccCCCCC---ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~---~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~ 74 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++. +||+|||++....... ...+|+.|+|||++.
T Consensus 102 ~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~ 180 (284)
T 3kk8_A 102 YSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLK 180 (284)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccccCCCCCcCCcCchhhc
Confidence 467888999999999999999999 999999999999976655 9999999987665443 356899999999999
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+..++.++||||||+++|+|++|+.||.................. ........+++.+.+++.+||+.||++|||+.+
T Consensus 181 ~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ 258 (284)
T 3kk8_A 181 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD--YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQ 258 (284)
T ss_dssp TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred CCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhcccc--CCchhhcccCHHHHHHHHHHcccChhhCCCHHH
Confidence 888999999999999999999999998765444333222222111 111122345688999999999999999999999
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
+++
T Consensus 259 ~l~ 261 (284)
T 3kk8_A 259 ALK 261 (284)
T ss_dssp HTT
T ss_pred Hhc
Confidence 986
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-29 Score=222.29 Aligned_cols=160 Identities=20% Similarity=0.298 Sum_probs=121.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC---------CCccccCCcccCcc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---------GKSYSTNLAFTPPE 71 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~---------~~~~~~~~~y~aPE 71 (340)
+++..+..++.||+.||.|||+.+ ++||||||+||+++ ++.+||+|||+++.... .....+++.|+|||
T Consensus 127 ~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE 204 (319)
T 2y4i_B 127 LDVNKTRQIAQEIVKGMGYLHAKG-ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPE 204 (319)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHTT-CCCCCCCSTTEEEC---CCEECCCSCCC----------CCSCBCCSGGGGTSCHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChhhEEEe-CCCEEEeecCCccccccccccccccccccCCCcccccChH
Confidence 467889999999999999999999 99999999999998 67999999998765421 11235788999999
Q ss_pred cccC---------CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhh
Q 019495 72 YLRT---------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 142 (340)
Q Consensus 72 ~~~~---------~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 142 (340)
++.+ ..++.++||||||+++|+|++|+.||.................. ...+..++..+.+++.+||
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~~l 280 (319)
T 2y4i_B 205 IIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKP----NLSQIGMGKEISDILLFCW 280 (319)
T ss_dssp HHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCC----CCCCSSCCTTHHHHHHHHH
T ss_pred HhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCC----CCCcCCCCHHHHHHHHHHh
Confidence 9874 34688999999999999999999998765444333222221111 1112234567999999999
Q ss_pred ccCCCCCCCHHHHHHHhcccccCC
Q 019495 143 QYEPRERPNPKSLVTALSPLQKET 166 (340)
Q Consensus 143 ~~~p~~Rps~~~i~~~L~~~~~~~ 166 (340)
+.||++|||+.++++.|+.+....
T Consensus 281 ~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 281 AFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp CSSTTTSCCHHHHHHHHTTC----
T ss_pred cCChhhCcCHHHHHHHHHHHHHhh
Confidence 999999999999999999987654
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=9e-30 Score=223.69 Aligned_cols=160 Identities=20% Similarity=0.263 Sum_probs=127.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-------ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~y~aPE~~ 73 (340)
+++.++..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||+++...... ...+++.|+|||++
T Consensus 118 ~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 196 (291)
T 1u46_A 118 FLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 196 (291)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhh
Confidence 467888999999999999999999 9999999999999999999999999987664332 23457789999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.+..++.++||||||+++|+|++ |..||............... ......+..++..+.+++.+||+.||++||++
T Consensus 197 ~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~ 272 (291)
T 1u46_A 197 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE----GERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 272 (291)
T ss_dssp HHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTS----CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred cCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHcc----CCCCCCCcCcCHHHHHHHHHHccCCcccCcCH
Confidence 88888999999999999999999 88888765433322222111 11222344567889999999999999999999
Q ss_pred HHHHHHhcccccC
Q 019495 153 KSLVTALSPLQKE 165 (340)
Q Consensus 153 ~~i~~~L~~~~~~ 165 (340)
.++++.|..+...
T Consensus 273 ~~l~~~l~~~~~~ 285 (291)
T 1u46_A 273 VALRDFLLEAQPT 285 (291)
T ss_dssp HHHHHHHHHHC--
T ss_pred HHHHHHHHHhCcc
Confidence 9999999887543
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=5e-29 Score=224.65 Aligned_cols=156 Identities=21% Similarity=0.231 Sum_probs=120.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||++.+.
T Consensus 109 ~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~ 187 (346)
T 1ua2_A 109 LTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGA 187 (346)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EECCCCCHHHEEEcCCCCEEEEecccceeccCCcccCCcccccccccCchHhhCC
Confidence 356788899999999999999999 999999999999999999999999998765432 234679999999999764
Q ss_pred -CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccc---cc-----------CCC--------CCchhHHH
Q 019495 77 -RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS---CL-----------EGQ--------FTDDDGTE 133 (340)
Q Consensus 77 -~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~---~~-----------~~~--------~~~~~~~~ 133 (340)
.++.++|||||||++|+|++|.+||..................+ .. ... .....+..
T Consensus 188 ~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (346)
T 1ua2_A 188 RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDD 267 (346)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHH
T ss_pred CCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHH
Confidence 47889999999999999999998887654322221111110000 00 000 01334578
Q ss_pred HHHHHHHhhccCCCCCCCHHHHHH
Q 019495 134 LVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 134 l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+.+++.+||+.||.+|||+.++++
T Consensus 268 ~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 268 LLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp HHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHhccChhhCCCHHHHhc
Confidence 999999999999999999999986
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9e-30 Score=246.31 Aligned_cols=157 Identities=18% Similarity=0.242 Sum_probs=128.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-------ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~y~aPE~~ 73 (340)
+++..++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++...... ...+|+.|+|||++
T Consensus 466 l~~~~~~~i~~qi~~~L~yLH~~~-iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~ 544 (635)
T 4fl3_A 466 VKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 544 (635)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhh
Confidence 468889999999999999999999 9999999999999999999999999988654332 12346789999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.+..++.++|||||||++|||++ |+.||.......+...... ......+..++..+.++|.+||+.||++||++
T Consensus 545 ~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~-----~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~ 619 (635)
T 4fl3_A 545 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK-----GERMGCPAGCPREMYDLMNLCWTYDVENRPGF 619 (635)
T ss_dssp HHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-----TCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCH
Confidence 98889999999999999999998 9988876544333222211 12233455677899999999999999999999
Q ss_pred HHHHHHhcccc
Q 019495 153 KSLVTALSPLQ 163 (340)
Q Consensus 153 ~~i~~~L~~~~ 163 (340)
.+|++.|+.+.
T Consensus 620 ~~l~~~L~~~~ 630 (635)
T 4fl3_A 620 AAVELRLRNYY 630 (635)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998764
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=230.12 Aligned_cols=156 Identities=17% Similarity=0.262 Sum_probs=112.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-CccccCCcccCcccccC-CCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRT-GRV 78 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~-~~~ 78 (340)
+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||++.+ ..+
T Consensus 129 l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 207 (367)
T 2fst_X 129 LTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHY 207 (367)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECC---------------CCCTTCCHHHHTTCCSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHhhEEECCCCCEEEeeccccccccccCCCcCcCcCccChHHHcCCcCC
Confidence 467889999999999999999999 999999999999999999999999999865443 34578999999999986 578
Q ss_pred CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccc------------------ccC--C-----CCCchhHHH
Q 019495 79 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS------------------CLE--G-----QFTDDDGTE 133 (340)
Q Consensus 79 ~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~------------------~~~--~-----~~~~~~~~~ 133 (340)
+.++|||||||++|+|++|+.||.+.............+..+ ... . ......++.
T Consensus 208 ~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (367)
T 2fst_X 208 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 287 (367)
T ss_dssp CTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHH
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHH
Confidence 999999999999999999999997653322111111100000 000 0 001234578
Q ss_pred HHHHHHHhhccCCCCCCCHHHHHH
Q 019495 134 LVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 134 l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+.+|+.+||+.||++|||+.+++.
T Consensus 288 ~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 288 AVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHhCCCCcccCcCHHHHhc
Confidence 999999999999999999999985
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=222.83 Aligned_cols=159 Identities=21% Similarity=0.329 Sum_probs=129.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||++....... ...+++.|+|||++.+
T Consensus 108 ~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 186 (288)
T 3kfa_A 108 VSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186 (288)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHT-CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHH
T ss_pred ccHhHHHHHHHHHHHHHHHHHHCC-ccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCCccccCcCChhhhcc
Confidence 467888999999999999999999 9999999999999999999999999987655432 2235678999999998
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
..++.++||||||+++|+|++ |..||.............. ......+..++..+.+++.+||+.||.+|||+.+
T Consensus 187 ~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ 261 (288)
T 3kfa_A 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-----DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAE 261 (288)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT-----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc-----cCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHH
Confidence 889999999999999999999 8877765433222221111 1222345566789999999999999999999999
Q ss_pred HHHHhcccccC
Q 019495 155 LVTALSPLQKE 165 (340)
Q Consensus 155 i~~~L~~~~~~ 165 (340)
+++.|+.+...
T Consensus 262 ~~~~l~~~~~~ 272 (288)
T 3kfa_A 262 IHQAFETMFQE 272 (288)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999877543
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=225.30 Aligned_cols=164 Identities=18% Similarity=0.243 Sum_probs=120.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....+++.|+|||++.+.
T Consensus 133 ~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 211 (310)
T 2wqm_A 133 IPERTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHEN 211 (310)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCC------------------CCSSCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCccccccCCCeeEeChHHhCCC
Confidence 467788999999999999999999 999999999999999999999999998765433 234678999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++||||||+++|+|++|+.||.......... ...+.........+..++..+.+++.+||+.||++|||+.+|+
T Consensus 212 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il 289 (310)
T 2wqm_A 212 GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL--CKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVY 289 (310)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHH--HHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHH--HHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence 89999999999999999999999886542211100 0011111111112234568899999999999999999999999
Q ss_pred HHhcccccCCC
Q 019495 157 TALSPLQKETE 167 (340)
Q Consensus 157 ~~L~~~~~~~~ 167 (340)
+.|+.+.....
T Consensus 290 ~~l~~l~~~~~ 300 (310)
T 2wqm_A 290 DVAKRMHACTA 300 (310)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhhh
Confidence 99999876544
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5e-29 Score=223.46 Aligned_cols=156 Identities=15% Similarity=0.235 Sum_probs=122.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC-------------------CCCeEEeccCCCccCCCC-Cc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-------------------DGNPRLSTFGLMKNSRDG-KS 60 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~-------------------~~~~kl~dfg~~~~~~~~-~~ 60 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++. ++.+||+|||+++..... ..
T Consensus 115 ~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 193 (339)
T 1z57_A 115 FRLDHIRKMAYQICKSVNFLHSNK-LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHST 193 (339)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSCCCS
T ss_pred CcHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCcccccc
Confidence 467788999999999999999999 999999999999987 678999999998865543 34
Q ss_pred cccCCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhc---cccc------------------
Q 019495 61 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ---MLTD------------------ 119 (340)
Q Consensus 61 ~~~~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~---~~~~------------------ 119 (340)
..+|+.|+|||++.+..++.++||||||+++|||++|..||.............. ..+.
T Consensus 194 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 273 (339)
T 1z57_A 194 LVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLD 273 (339)
T ss_dssp SCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEEC
T ss_pred ccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhcccc
Confidence 5789999999999988899999999999999999999999876432221111000 0000
Q ss_pred ----------------c-ccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 120 ----------------S-CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 120 ----------------~-~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+ ......+...+..+.+++.+||+.||.+|||+.++++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 274 WDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK 328 (339)
T ss_dssp CCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence 0 0001123445788999999999999999999999975
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-29 Score=224.41 Aligned_cols=154 Identities=14% Similarity=0.181 Sum_probs=123.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC---CCCeEEeccCCCccCCCC---CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~---~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~ 74 (340)
+++.++..++.||+.||.|||+++ |+||||||+||+++. ++.+||+|||+++..... ....+|+.|+|||++.
T Consensus 128 ~~~~~~~~i~~ql~~~L~~LH~~g-ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~ 206 (327)
T 3lm5_A 128 VSENDVIRLIKQILEGVYYLHQNN-IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILN 206 (327)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---------CCCGGGCCHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccccccCCcCccCCeeec
Confidence 467889999999999999999999 999999999999987 789999999999876543 2346899999999999
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+..++.++||||||+++|+|++|+.||................. .........++..+.+++.+||+.||++|||+.+
T Consensus 207 ~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ 284 (327)
T 3lm5_A 207 YDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNV--DYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEI 284 (327)
T ss_dssp TCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhccc--ccCchhhcccCHHHHHHHHHHcCCChhhCcCHHH
Confidence 88899999999999999999999999876544332222111111 1122233456688999999999999999999999
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
+++
T Consensus 285 ll~ 287 (327)
T 3lm5_A 285 CLS 287 (327)
T ss_dssp HTT
T ss_pred HhC
Confidence 985
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=230.16 Aligned_cols=154 Identities=17% Similarity=0.164 Sum_probs=124.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC--CCCeEEeccCCCccCCCCC---ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE--DGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~--~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~ 75 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++. ++.+||+|||+++...... ...+|+.|+|||++.+
T Consensus 146 l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~ 224 (387)
T 1kob_A 146 MSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDR 224 (387)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeecccchHHeEEecCCCCceEEEecccceecCCCcceeeeccCCCccCchhccC
Confidence 467889999999999999999999 999999999999974 5779999999998765442 3468999999999998
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i 155 (340)
..++.++|||||||++|+|++|..||............... ...+.......++..+.++|.+||+.||++|||+.++
T Consensus 225 ~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~el 302 (387)
T 1kob_A 225 EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRC--DWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDA 302 (387)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHC--CCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred CCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 88999999999999999999999998765433222211111 0111222334566889999999999999999999999
Q ss_pred HH
Q 019495 156 VT 157 (340)
Q Consensus 156 ~~ 157 (340)
++
T Consensus 303 l~ 304 (387)
T 1kob_A 303 LE 304 (387)
T ss_dssp HT
T ss_pred hh
Confidence 85
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-28 Score=218.52 Aligned_cols=150 Identities=20% Similarity=0.245 Sum_probs=122.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||++...... ....+++.|+|||++.
T Consensus 106 ~~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 184 (305)
T 2wtk_C 106 FPVCQAHGYFCQLIDGLEYLHSQG-IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIAN 184 (305)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhcc
Confidence 467889999999999999999999 999999999999999999999999998765422 2345789999999997
Q ss_pred CCC--CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 75 TGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 75 ~~~--~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
+.. .+.++||||||+++|+|++|+.||............... ...++..++..+.+++.+||+.||.+|||+
T Consensus 185 ~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~ 258 (305)
T 2wtk_C 185 GLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG------SYAIPGDCGPPLSDLLKGMLEYEPAKRFSI 258 (305)
T ss_dssp CCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC------CCCCCSSSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred CcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcC------CCCCCCccCHHHHHHHHHHccCChhhCCCH
Confidence 643 377899999999999999999998765443322221111 112345567889999999999999999999
Q ss_pred HHHHH
Q 019495 153 KSLVT 157 (340)
Q Consensus 153 ~~i~~ 157 (340)
.++++
T Consensus 259 ~~ll~ 263 (305)
T 2wtk_C 259 RQIRQ 263 (305)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99986
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.1e-29 Score=228.86 Aligned_cols=154 Identities=18% Similarity=0.181 Sum_probs=124.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-----CccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~ 75 (340)
+++.+...++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... .+..||+.|+|||++.+
T Consensus 165 ~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~ 243 (410)
T 3v8s_A 165 VPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 243 (410)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhc
Confidence 467788899999999999999999 999999999999999999999999999765543 25678999999999986
Q ss_pred CC----CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCC--C
Q 019495 76 GR----VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRE--R 149 (340)
Q Consensus 76 ~~----~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~--R 149 (340)
.. ++.++|+|||||++|||++|+.||.................. +.......++..+.++|.+||..+|.+ |
T Consensus 244 ~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~--~~~p~~~~~s~~~~~li~~lL~~~~~rlgR 321 (410)
T 3v8s_A 244 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS--LTFPDDNDISKEAKNLICAFLTDREVRLGR 321 (410)
T ss_dssp TTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH--CCCCTTCCCCHHHHHHHHHHSSCGGGCTTS
T ss_pred cCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcccc--ccCCCcccccHHHHHHHHHHccChhhhCCC
Confidence 54 788999999999999999999999876544333332221111 111112345688999999999999988 9
Q ss_pred CCHHHHHH
Q 019495 150 PNPKSLVT 157 (340)
Q Consensus 150 ps~~~i~~ 157 (340)
|++.+|+.
T Consensus 322 ~~~~ei~~ 329 (410)
T 3v8s_A 322 NGVEEIKR 329 (410)
T ss_dssp SCHHHHHT
T ss_pred CCHHHHhc
Confidence 99999986
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.7e-29 Score=224.19 Aligned_cols=162 Identities=18% Similarity=0.231 Sum_probs=121.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--------CccccCCcccCccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--------KSYSTNLAFTPPEY 72 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--------~~~~~~~~y~aPE~ 72 (340)
+++.++..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||+
T Consensus 121 ~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~ 199 (351)
T 3mi9_A 121 FTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPEL 199 (351)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchh
Confidence 467889999999999999999999 999999999999999999999999998764321 23457899999999
Q ss_pred ccC-CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcc---ccccccCC--------------CCCc------
Q 019495 73 LRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM---LTDSCLEG--------------QFTD------ 128 (340)
Q Consensus 73 ~~~-~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~--------------~~~~------ 128 (340)
+.+ ..++.++|||||||++|+|++|..||............... ........ ....
T Consensus 200 ~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (351)
T 3mi9_A 200 LLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRL 279 (351)
T ss_dssp HTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHH
T ss_pred hcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHh
Confidence 876 45799999999999999999999988765332221111110 00000000 0000
Q ss_pred ---hhHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccccC
Q 019495 129 ---DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 165 (340)
Q Consensus 129 ---~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 165 (340)
..++.+.+++.+||+.||++|||+.++++ +++...
T Consensus 280 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~--hp~f~~ 317 (351)
T 3mi9_A 280 KAYVRDPYALDLIDKLLVLDPAQRIDSDDALN--HDFFWS 317 (351)
T ss_dssp HHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT--SGGGGS
T ss_pred hhccCChHHHHHHHHHhcCChhhCCCHHHHhC--CCCcCC
Confidence 01466899999999999999999999986 444433
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.4e-29 Score=224.25 Aligned_cols=156 Identities=16% Similarity=0.199 Sum_probs=122.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEe-------------------cCCCCeEEeccCCCccCCCC-Cc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF-------------------DEDGNPRLSTFGLMKNSRDG-KS 60 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill-------------------~~~~~~kl~dfg~~~~~~~~-~~ 60 (340)
+++.++..++.||+.||.|||+++ |+||||||+||++ +.++.+||+|||+++..... ..
T Consensus 120 ~~~~~~~~i~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 198 (355)
T 2eu9_A 120 YPLPHVRHMAYQLCHALRFLHENQ-LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTT 198 (355)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCCCS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccccccccC
Confidence 467889999999999999999999 9999999999999 56788999999999865443 34
Q ss_pred cccCCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhc---cccc------------------
Q 019495 61 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ---MLTD------------------ 119 (340)
Q Consensus 61 ~~~~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~---~~~~------------------ 119 (340)
..+|+.|+|||++.+..++.++|||||||++|||++|+.||.............. ..+.
T Consensus 199 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 278 (355)
T 2eu9_A 199 IVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLV 278 (355)
T ss_dssp SCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEEC
T ss_pred CcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccc
Confidence 5789999999999988899999999999999999999999876432211110000 0000
Q ss_pred ----------------c-ccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 120 ----------------S-CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 120 ----------------~-~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+ ..........+..+.+++.+||+.||++|||+.++++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 279 WDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp CCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0 0000112334678999999999999999999999984
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.2e-29 Score=219.36 Aligned_cols=150 Identities=19% Similarity=0.244 Sum_probs=124.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.++..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++...... ....+++.|+|||++.+.
T Consensus 112 ~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 190 (294)
T 2rku_A 112 LTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 190 (294)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEcCCCCEEEEeccCceecccCccccccccCCCCcCCcchhccC
Confidence 467889999999999999999999 999999999999999999999999998765422 234678999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++||||||+++|+|++|+.||............... ...++...+..+.+++.+||+.||++|||+.+++
T Consensus 191 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll 264 (294)
T 2rku_A 191 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN------EYSIPKHINPVAASLIQKMLQTDPTARPTINELL 264 (294)
T ss_dssp CBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGG
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhc------cCCCccccCHHHHHHHHHHcccChhhCcCHHHHh
Confidence 8899999999999999999999998765433222111111 1123445668899999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
+
T Consensus 265 ~ 265 (294)
T 2rku_A 265 N 265 (294)
T ss_dssp G
T ss_pred h
Confidence 6
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-29 Score=227.58 Aligned_cols=156 Identities=17% Similarity=0.272 Sum_probs=119.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhC-CCccccCCCCCCEEec------CCCCeEEeccCCCccCCCC-CccccCCcccCccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFD------EDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEY 72 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~-~~iiH~dlk~~nill~------~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~ 72 (340)
+++..+..++.||+.||.|||++ + |+||||||+||+++ ..+.+||+|||+++..... ....+|+.|+|||+
T Consensus 128 ~~~~~~~~i~~qi~~aL~~lH~~~~-ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~ 206 (373)
T 1q8y_A 128 IPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEV 206 (373)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHhcCC-EEecCCChHHeEEeccCCCcCcceEEEcccccccccCCCCCCCCCCccccCcHH
Confidence 46788899999999999999998 8 99999999999994 3447999999999765543 34578999999999
Q ss_pred ccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHh------hhhhc---cccc--------------------c---
Q 019495 73 LRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR------DRNLQ---MLTD--------------------S--- 120 (340)
Q Consensus 73 ~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~------~~~~~---~~~~--------------------~--- 120 (340)
+.+..++.++|||||||++|+|++|+.||......... ..... ..+. .
T Consensus 207 ~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (373)
T 1q8y_A 207 LLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISK 286 (373)
T ss_dssp HHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCC
T ss_pred HhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhccccc
Confidence 99888999999999999999999999998653211000 00000 0000 0
Q ss_pred ----------ccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 121 ----------CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 121 ----------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.....++..++..+.++|.+||+.||++|||+.++++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 287 LKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp CCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred ccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence 0011245567889999999999999999999999986
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-29 Score=219.65 Aligned_cols=150 Identities=17% Similarity=0.231 Sum_probs=103.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++..+..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++...... ....+|+.|+|||++.+.
T Consensus 109 ~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 187 (278)
T 3cok_A 109 FSENEARHFMHQIITGMLYLHSHG-ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRS 187 (278)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSSCCGGGEEECTTCCEEECCCTTCEECC------------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcceeccCCCCcCCcchhcCC
Confidence 467889999999999999999999 999999999999999999999999998765422 234678999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++||||||+++|+|++|+.||.......... ..... ....+...+..+.+++.+||+.||++|||+.+++
T Consensus 188 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l 261 (278)
T 3cok_A 188 AHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN----KVVLA--DYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVL 261 (278)
T ss_dssp ----CTHHHHHHHHHHHHHHSSCSSCCCSCC---------CCSS--CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHH----HHhhc--ccCCccccCHHHHHHHHHHcccCHhhCCCHHHHh
Confidence 88999999999999999999999886543221111 11110 1123445668899999999999999999999997
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
+
T Consensus 262 ~ 262 (278)
T 3cok_A 262 D 262 (278)
T ss_dssp T
T ss_pred c
Confidence 5
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-29 Score=228.97 Aligned_cols=154 Identities=18% Similarity=0.138 Sum_probs=123.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEe--cCCCCeEEeccCCCccCCCCC---ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF--DEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill--~~~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~ 75 (340)
+++..+..++.||+.||.|||+.+ |+||||||+||++ +.++.+||+|||+++...... ...+|+.|+|||++.+
T Consensus 184 l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~ 262 (373)
T 2x4f_A 184 LTELDTILFMKQICEGIRHMHQMY-ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNY 262 (373)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccCCCcEeChhhccC
Confidence 467888999999999999999999 9999999999999 567789999999998765432 3468999999999988
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i 155 (340)
..++.++|||||||++|+|++|..||.................. +.......++..+.++|.+||+.||.+|||+.++
T Consensus 263 ~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~ 340 (373)
T 2x4f_A 263 DFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWD--LEDEEFQDISEEAKEFISKLLIKEKSWRISASEA 340 (373)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--SCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC--CChhhhccCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 88999999999999999999999998765443322222211110 1111123456889999999999999999999999
Q ss_pred HH
Q 019495 156 VT 157 (340)
Q Consensus 156 ~~ 157 (340)
++
T Consensus 341 l~ 342 (373)
T 2x4f_A 341 LK 342 (373)
T ss_dssp HH
T ss_pred hc
Confidence 86
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-29 Score=230.21 Aligned_cols=156 Identities=21% Similarity=0.239 Sum_probs=117.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCC-----------CCccccCCcccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-----------GKSYSTNLAFTP 69 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~-----------~~~~~~~~~y~a 69 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||.+..... .....+|+.|+|
T Consensus 125 ~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 203 (389)
T 3gni_B 125 MNELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLS 203 (389)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccC
Confidence 467888999999999999999999 99999999999999999999999998754321 122367889999
Q ss_pred cccccC--CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccc----------------------------
Q 019495 70 PEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD---------------------------- 119 (340)
Q Consensus 70 PE~~~~--~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~---------------------------- 119 (340)
||++.+ ..++.++|||||||++|+|++|+.||.+...............+
T Consensus 204 PE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (389)
T 3gni_B 204 PEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSD 283 (389)
T ss_dssp HHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----------------------------------
T ss_pred HHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccccccccccccccccccccccccc
Confidence 999987 56899999999999999999999998653221111111100000
Q ss_pred ------------cccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 120 ------------SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 120 ------------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.......+..++..+.+||.+||+.||++|||+.++++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 284 SLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp ----------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 00011123445678999999999999999999999985
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-29 Score=224.70 Aligned_cols=156 Identities=18% Similarity=0.333 Sum_probs=118.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccC-
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRT- 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~- 75 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||++.+
T Consensus 97 ~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~ 175 (324)
T 3mtl_A 97 INMHNVKLFLFQLLRGLAYCHRQK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGS 175 (324)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EEESSCCGGGEEECTTCCEEECSSSEEECC------------CGGGCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ccCCCcCHHHEEECCCCCEEEccCcccccccCCccccccccCcccccChhhhcCC
Confidence 467788899999999999999999 999999999999999999999999998765432 23457899999999876
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccc---ccC---------------------CCCCchhH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS---CLE---------------------GQFTDDDG 131 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~---------------------~~~~~~~~ 131 (340)
..++.++|||||||++|+|++|+.||...............+..+ ... .......+
T Consensus 176 ~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (324)
T 3mtl_A 176 TDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLD 255 (324)
T ss_dssp CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSC
T ss_pred CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCC
Confidence 468999999999999999999999997754333222211111000 000 00112345
Q ss_pred HHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 132 TELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 132 ~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
..+.+++.+||+.||++|||+.++++
T Consensus 256 ~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 256 SDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 78999999999999999999999986
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-29 Score=222.19 Aligned_cols=153 Identities=19% Similarity=0.262 Sum_probs=112.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhC-CCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC---ccccCCcccCcccc---
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYL--- 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~-~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~--- 73 (340)
+++..+..++.||+.||.|||++ + |+||||||+||+++.++.+||+|||+++...... ...+|+.|+|||++
T Consensus 106 ~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~ 184 (290)
T 3fme_A 106 IPEDILGKIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPE 184 (290)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHSC-CCCCCCSGGGCEECTTCCEEBCCC---------------CCCCCCSCHHHHSCC
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecCCcccccccccccccCCCccccChhhcChh
Confidence 47888999999999999999998 8 9999999999999999999999999987654432 34688999999996
Q ss_pred -cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 74 -RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 74 -~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.+..++.++||||||+++|+|++|+.||............... .......+...+..+.+++.+||+.||++|||+
T Consensus 185 ~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~ 261 (290)
T 3fme_A 185 LNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE---EPSPQLPADKFSAEFVDFTSQCLKKNSKERPTY 261 (290)
T ss_dssp TTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHH---SCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred hcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhc---cCCCCcccccCCHHHHHHHHHHhhcChhhCcCH
Confidence 4456888999999999999999999998653222111111111 111112233456889999999999999999999
Q ss_pred HHHHH
Q 019495 153 KSLVT 157 (340)
Q Consensus 153 ~~i~~ 157 (340)
.++++
T Consensus 262 ~e~l~ 266 (290)
T 3fme_A 262 PELMQ 266 (290)
T ss_dssp HHHTT
T ss_pred HHHHh
Confidence 99975
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-29 Score=219.72 Aligned_cols=147 Identities=16% Similarity=0.215 Sum_probs=120.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCC-------------------CCeEEeccCCCccCCCCCcc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-------------------GNPRLSTFGLMKNSRDGKSY 61 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~-------------------~~~kl~dfg~~~~~~~~~~~ 61 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.+ +.+||+|||.+.........
T Consensus 112 ~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 190 (289)
T 1x8b_A 112 FKEAELKDLLLQVGRGLRYIHSMS-LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE 190 (289)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCcccc
Confidence 467889999999999999999999 9999999999999844 47999999999887777777
Q ss_pred ccCCcccCcccccCC-CCCCCcceehHHHHHHHHhhCCCCCCcchhH-HHhhhhhccccccccCCCCCchhHHHHHHHHH
Q 019495 62 STNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 139 (340)
Q Consensus 62 ~~~~~y~aPE~~~~~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 139 (340)
.+|+.|+|||++.+. .++.++||||||+++|+|++|.+++...... .+.. .....++..++..+.+++.
T Consensus 191 ~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~li~ 261 (289)
T 1x8b_A 191 EGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQ---------GRLPRIPQVLSQEFTELLK 261 (289)
T ss_dssp CCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHHHHT---------TCCCCCSSCCCHHHHHHHH
T ss_pred CCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHHHHc---------CCCCCCCcccCHHHHHHHH
Confidence 899999999999865 5667999999999999999998765443211 1111 1112344556789999999
Q ss_pred HhhccCCCCCCCHHHHHH
Q 019495 140 RCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 140 ~cl~~~p~~Rps~~~i~~ 157 (340)
+||+.||++|||+.++++
T Consensus 262 ~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 262 VMIHPDPERRPSAMALVK 279 (289)
T ss_dssp HHTCSSGGGSCCHHHHHT
T ss_pred HHhCCCcccCCCHHHHhh
Confidence 999999999999999985
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-29 Score=229.04 Aligned_cols=156 Identities=18% Similarity=0.301 Sum_probs=120.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-------CccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-------KSYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~y~aPE~~ 73 (340)
+++.++..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||++
T Consensus 125 ~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 203 (364)
T 3qyz_A 125 LSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203 (364)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHh
Confidence 467889999999999999999999 999999999999999999999999998765432 234689999999987
Q ss_pred cC-CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccc--------------------ccCC-----CCC
Q 019495 74 RT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS--------------------CLEG-----QFT 127 (340)
Q Consensus 74 ~~-~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~-----~~~ 127 (340)
.+ ..++.++|||||||++|+|++|+.||...............+..+ .... ...
T Consensus 204 ~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (364)
T 3qyz_A 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF 283 (364)
T ss_dssp HTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHC
T ss_pred cCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhC
Confidence 65 458999999999999999999999987643222111111000000 0000 011
Q ss_pred chhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 128 DDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 128 ~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
...+..+.+++.+||+.||++|||+.++++
T Consensus 284 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 284 PNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 334578999999999999999999999986
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-29 Score=229.81 Aligned_cols=156 Identities=20% Similarity=0.289 Sum_probs=122.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEec-CCCCeEEeccCCCccCCCC---CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~-~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+.+ |+||||||+||+++ .++.+||+|||+++..... ....+|+.|+|||++.+.
T Consensus 138 l~~~~~~~i~~qi~~aL~~LH~~g-i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~ 216 (383)
T 3eb0_A 138 IPMNLISIYIYQLFRAVGFIHSLG-ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGA 216 (383)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTT-EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCc-CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCC
Confidence 467888999999999999999999 99999999999997 6889999999999865433 345678999999998764
Q ss_pred -CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccc-----------------------ccccCCCCCchhHH
Q 019495 77 -RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT-----------------------DSCLEGQFTDDDGT 132 (340)
Q Consensus 77 -~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~ 132 (340)
.++.++||||+||++|+|++|+.||.+............... .......++...+.
T Consensus 217 ~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (383)
T 3eb0_A 217 TEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPS 296 (383)
T ss_dssp SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCH
T ss_pred CCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCH
Confidence 489999999999999999999999876533222111111000 00011113444668
Q ss_pred HHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 133 ELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 133 ~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.+.+++.+||+.||.+|||+.+++.
T Consensus 297 ~~~~li~~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 297 LAIDLLEQILRYEPDLRINPYEAMA 321 (383)
T ss_dssp HHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHccCChhhCCCHHHHhc
Confidence 8999999999999999999999985
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=99.96 E-value=6.1e-29 Score=222.02 Aligned_cols=156 Identities=19% Similarity=0.258 Sum_probs=123.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+++.|+|||++.+..
T Consensus 117 ~~~~~~~~~~~qi~~~l~~lH~~g-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 195 (326)
T 1blx_A 117 VPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 195 (326)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHHHeEEcCCCCEEEecCcccccccCCCCccccccccceeCHHHHhcCC
Confidence 467889999999999999999999 999999999999999999999999998765432 2456789999999999888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccc---------------------ccccCCCCCchhHHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT---------------------DSCLEGQFTDDDGTELVR 136 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~l~~ 136 (340)
++.++||||||+++|+|++|+.||................. .......+...++..+.+
T Consensus 196 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (326)
T 1blx_A 196 YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKD 275 (326)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHH
T ss_pred CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHH
Confidence 99999999999999999999999876533222111111000 000001123446688999
Q ss_pred HHHHhhccCCCCCCCHHHHHH
Q 019495 137 LASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 137 li~~cl~~~p~~Rps~~~i~~ 157 (340)
++.+||+.||++|||+.+++.
T Consensus 276 li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 276 LLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp HHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHcCCCcccCCCHHHHhc
Confidence 999999999999999999985
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=226.76 Aligned_cols=165 Identities=13% Similarity=0.175 Sum_probs=125.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHH--------hCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--------CccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCT--------SKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--------KSYSTN 64 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH--------~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--------~~~~~~ 64 (340)
+++.+++.++.||+.||.||| +.+ |+||||||+||+++.++.+||+|||+++..... ....+|
T Consensus 136 ~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt 214 (342)
T 1b6c_B 136 VTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 214 (342)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC-eeeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcC
Confidence 467889999999999999999 788 999999999999999999999999998765432 234678
Q ss_pred CcccCcccccCC------CCCCCcceehHHHHHHHHhhC----------CCCCCcchh-----HHHhhhhhccccccccC
Q 019495 65 LAFTPPEYLRTG------RVTPESVIYSFGTLLLDLLSG----------KHIPPSHAL-----DLIRDRNLQMLTDSCLE 123 (340)
Q Consensus 65 ~~y~aPE~~~~~------~~~~~~Di~s~G~il~el~~g----------~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 123 (340)
+.|+|||++.+. .++.++||||||+++|+|++| ..||..... ..+..........+.+.
T Consensus 215 ~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (342)
T 1b6c_B 215 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIP 294 (342)
T ss_dssp GGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCC
T ss_pred cccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCc
Confidence 999999999865 233689999999999999999 556644211 11111111111111111
Q ss_pred CC-CCchhHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccccCC
Q 019495 124 GQ-FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 166 (340)
Q Consensus 124 ~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~ 166 (340)
.. ....++..+.+++.+||+.||++|||+.+|++.|+.+....
T Consensus 295 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 295 NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp GGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred ccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 11 12356678999999999999999999999999999886553
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.1e-29 Score=226.65 Aligned_cols=103 Identities=16% Similarity=0.245 Sum_probs=91.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHh--CCCccccCCCCCCEEec--CCCCeEEeccCCCccCCCC-CccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTS--KGRALYHDLNAYRILFD--EDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~--~~~iiH~dlk~~nill~--~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~ 75 (340)
+++..+..++.||+.||.|||+ .+ |+||||||+||+++ .++.+||+|||+++..... ....+|+.|+|||++.+
T Consensus 154 ~~~~~~~~i~~qi~~al~~lH~~~~~-ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~ 232 (382)
T 2vx3_A 154 VSLNLTRKFAQQMCTALLFLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLG 232 (382)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTSTTTC-EECCCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCCC-EEcCCCCcccEEEecCCCCcEEEEeccCceecccccccccCCccccChHHHcC
Confidence 4678899999999999999994 57 99999999999994 5778999999999876544 35678999999999998
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcc
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSH 104 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~ 104 (340)
..++.++|||||||++|||++|+.||...
T Consensus 233 ~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 233 MPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 88999999999999999999999998764
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.2e-29 Score=222.25 Aligned_cols=161 Identities=19% Similarity=0.314 Sum_probs=124.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-------------ccccCCcc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------------SYSTNLAF 67 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-------------~~~~~~~y 67 (340)
+++.++..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||++....... ...+|+.|
T Consensus 131 ~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 209 (317)
T 2buj_A 131 LTEDQILWLLLGICRGLEAIHAKG-YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISY 209 (317)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCccc
Confidence 467889999999999999999999 9999999999999999999999999887643211 12358999
Q ss_pred cCcccccCCC---CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhcc
Q 019495 68 TPPEYLRTGR---VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 144 (340)
Q Consensus 68 ~aPE~~~~~~---~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 144 (340)
+|||++.+.. ++.++||||||+++|+|++|+.||...... ................+..++..+.+++.+||+.
T Consensus 210 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 286 (317)
T 2buj_A 210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK---GDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTV 286 (317)
T ss_dssp CCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT---TSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCS
T ss_pred CCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc---cchhhHHhhccCCCCccccCCHHHHHHHHHHhhc
Confidence 9999997543 688999999999999999999887432110 0000000011111222345568899999999999
Q ss_pred CCCCCCCHHHHHHHhcccccC
Q 019495 145 EPRERPNPKSLVTALSPLQKE 165 (340)
Q Consensus 145 ~p~~Rps~~~i~~~L~~~~~~ 165 (340)
||.+||++.++++.|+.+...
T Consensus 287 dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 287 DPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp SGGGSCCHHHHHHHHHHTCCC
T ss_pred ChhhCCCHHHHHHHhhhcCCC
Confidence 999999999999999988543
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=232.90 Aligned_cols=156 Identities=13% Similarity=0.187 Sum_probs=121.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhC-CCccccCCCCCCEEecCCC-------------------------------------
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDG------------------------------------- 42 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~-~~iiH~dlk~~nill~~~~------------------------------------- 42 (340)
+++..+..++.||+.||.|||++ + |+||||||+|||++.++
T Consensus 143 ~~~~~~~~i~~qi~~aL~~lH~~~g-ivHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (397)
T 1wak_A 143 LPLPCVKKIIQQVLQGLDYLHTKCR-IIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFL 221 (397)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTC-EECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCccccccc
Confidence 46788999999999999999998 8 99999999999999775
Q ss_pred ------------CeEEeccCCCccCCCC-CccccCCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHH-
Q 019495 43 ------------NPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL- 108 (340)
Q Consensus 43 ------------~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~- 108 (340)
.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.......
T Consensus 222 ~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~ 301 (397)
T 1wak_A 222 VNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEY 301 (397)
T ss_dssp CCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSS
T ss_pred ccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCccccc
Confidence 7999999998765443 34578999999999998889999999999999999999999986432100
Q ss_pred ------Hhh--hhhccc--------------ccc-----c--------------cCCCCCchhHHHHHHHHHHhhccCCC
Q 019495 109 ------IRD--RNLQML--------------TDS-----C--------------LEGQFTDDDGTELVRLASRCLQYEPR 147 (340)
Q Consensus 109 ------~~~--~~~~~~--------------~~~-----~--------------~~~~~~~~~~~~l~~li~~cl~~~p~ 147 (340)
+.. ...... ... . -....+...+..+.+||.+||+.||+
T Consensus 302 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 381 (397)
T 1wak_A 302 TRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPE 381 (397)
T ss_dssp CHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGG
T ss_pred CchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChh
Confidence 000 000000 000 0 00123455678899999999999999
Q ss_pred CCCCHHHHHH
Q 019495 148 ERPNPKSLVT 157 (340)
Q Consensus 148 ~Rps~~~i~~ 157 (340)
+|||+.++++
T Consensus 382 ~Rpt~~e~l~ 391 (397)
T 1wak_A 382 KRATAAECLR 391 (397)
T ss_dssp GSCCHHHHHT
T ss_pred hcCCHHHHhh
Confidence 9999999985
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-29 Score=225.76 Aligned_cols=148 Identities=20% Similarity=0.320 Sum_probs=115.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----------------CccccCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----------------KSYSTNL 65 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----------------~~~~~~~ 65 (340)
++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+
T Consensus 162 ~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 162 EHGVCLHIFIQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred hhHHHHHHHHHHHHHHHHHHhCC-eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 34567899999999999999999 999999999999999999999999998865443 2345899
Q ss_pred cccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccC
Q 019495 66 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 145 (340)
Q Consensus 66 ~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~ 145 (340)
.|+|||++.+..++.++||||||+++|+|++|..|+..... ..... ... ..+......++.+.+++.+||+.|
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~--~~~~~-~~~----~~~~~~~~~~~~~~~li~~~l~~~ 313 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR--IITDV-RNL----KFPLLFTQKYPQEHMMVQDMLSPS 313 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH--HHHHH-HTT----CCCHHHHHHCHHHHHHHHHHHCSS
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH--HHHHh-hcc----CCCcccccCChhHHHHHHHHccCC
Confidence 99999999988899999999999999999998755322111 10000 000 000111234467899999999999
Q ss_pred CCCCCCHHHHHH
Q 019495 146 PRERPNPKSLVT 157 (340)
Q Consensus 146 p~~Rps~~~i~~ 157 (340)
|++|||+.++++
T Consensus 314 p~~Rps~~~~l~ 325 (332)
T 3qd2_B 314 PTERPEATDIIE 325 (332)
T ss_dssp GGGSCCHHHHHH
T ss_pred CCcCCCHHHHhh
Confidence 999999999986
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=227.09 Aligned_cols=163 Identities=20% Similarity=0.310 Sum_probs=128.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-------ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~y~aPE~~ 73 (340)
+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...++..|+|||++
T Consensus 142 ~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 220 (326)
T 2w1i_A 142 IDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL 220 (326)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhh
Confidence 467889999999999999999999 9999999999999999999999999998764432 22456779999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhh-----------hhhccccccccCCCCCchhHHHHHHHHHHhh
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD-----------RNLQMLTDSCLEGQFTDDDGTELVRLASRCL 142 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 142 (340)
.+..++.++||||||+++|+|++|..|+.......... ..+............+..++..+.+++.+||
T Consensus 221 ~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 300 (326)
T 2w1i_A 221 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECW 300 (326)
T ss_dssp HHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHS
T ss_pred cCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHc
Confidence 88888999999999999999999987765331111100 0011111111122345567789999999999
Q ss_pred ccCCCCCCCHHHHHHHhccccc
Q 019495 143 QYEPRERPNPKSLVTALSPLQK 164 (340)
Q Consensus 143 ~~~p~~Rps~~~i~~~L~~~~~ 164 (340)
+.||++|||+.++++.|+.+..
T Consensus 301 ~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 301 NNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp CSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCChhhCcCHHHHHHHHHHHHH
Confidence 9999999999999999987753
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=223.96 Aligned_cols=156 Identities=17% Similarity=0.256 Sum_probs=119.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-CccccCCcccCcccccC-CCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRT-GRV 78 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~-~~~ 78 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||++.+ ..+
T Consensus 141 ~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 219 (371)
T 4exu_A 141 FSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHY 219 (371)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECSTTCC--------CTTCCCTTSCHHHHSCCSCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-CcCCCcCHHHeEECCCCCEEEEecCcccccccCcCCcccCccccCHHHhcCCCCC
Confidence 467889999999999999999999 999999999999999999999999999765443 34578999999999987 678
Q ss_pred CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccc----------------------ccccCC---CCCchhHHH
Q 019495 79 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT----------------------DSCLEG---QFTDDDGTE 133 (340)
Q Consensus 79 ~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~---~~~~~~~~~ 133 (340)
+.++|||||||++|+|++|+.||.+............... ...... .....+++.
T Consensus 220 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (371)
T 4exu_A 220 NQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQ 299 (371)
T ss_dssp CTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHH
T ss_pred CcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChH
Confidence 9999999999999999999999876432221111111000 000000 012234688
Q ss_pred HHHHHHHhhccCCCCCCCHHHHHH
Q 019495 134 LVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 134 l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+.+++.+||+.||++|||+.++++
T Consensus 300 ~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 300 AADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHHHCCCChhhcCCHHHHhc
Confidence 999999999999999999999985
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.6e-29 Score=217.80 Aligned_cols=152 Identities=19% Similarity=0.275 Sum_probs=117.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEe---cCCCCeEEeccCCCccCCCC---CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill---~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~ 74 (340)
+++..+..++.||+.||.|||+++ |+||||||+||++ +.++.+||+|||+++..... ....+|+.|+|||++.
T Consensus 121 ~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~ 199 (285)
T 3is5_A 121 LSEGYVAELMKQMMNALAYFHSQH-VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK 199 (285)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----------CTTGGGCCHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcccCcCcccccCcCChHHhc
Confidence 467788999999999999999999 9999999999999 45678999999999765433 2446799999999986
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+.++.++||||||+++|+|++|+.||.................. .. ......++.+.+++.+||+.||++|||+.+
T Consensus 200 -~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~e 275 (285)
T 3is5_A 200 -RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPN--YA-VECRPLTPQAVDLLKQMLTKDPERRPSAAQ 275 (285)
T ss_dssp -TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC--CC-C--CCCCHHHHHHHHHHTCSCTTTSCCHHH
T ss_pred -cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcc--cc-cccCcCCHHHHHHHHHHccCChhhCcCHHH
Confidence 56889999999999999999999999776544333222211111 11 111224578999999999999999999999
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
++.
T Consensus 276 ~l~ 278 (285)
T 3is5_A 276 VLH 278 (285)
T ss_dssp HHT
T ss_pred Hhc
Confidence 985
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-28 Score=222.92 Aligned_cols=156 Identities=14% Similarity=0.231 Sum_probs=119.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--------------CccccCCc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--------------KSYSTNLA 66 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--------------~~~~~~~~ 66 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.
T Consensus 109 ~~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 187 (353)
T 2b9h_A 109 LSDDHIQYFIYQTLRAVKVLHGSN-VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRW 187 (353)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhcccccc
Confidence 467889999999999999999999 999999999999999999999999998765422 12357899
Q ss_pred ccCcccccC-CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccc----------------------ccC
Q 019495 67 FTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS----------------------CLE 123 (340)
Q Consensus 67 y~aPE~~~~-~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~ 123 (340)
|+|||++.+ ..++.++|||||||++|+|++|+.||.+................+ ...
T Consensus 188 y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (353)
T 2b9h_A 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYP 267 (353)
T ss_dssp GCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCC
T ss_pred ccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCC
Confidence 999998765 668999999999999999999999987653221111100000000 000
Q ss_pred ----CCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 124 ----GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 124 ----~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
......++..+.+++.+||+.||++|||+.++++
T Consensus 268 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 268 AAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp CCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0011345678999999999999999999999986
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=3e-29 Score=227.70 Aligned_cols=154 Identities=10% Similarity=0.097 Sum_probs=124.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC-----------CCCeEEeccCCCccCC---CC---Ccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-----------DGNPRLSTFGLMKNSR---DG---KSYST 63 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~-----------~~~~kl~dfg~~~~~~---~~---~~~~~ 63 (340)
++|.+++.|+.||+.||.|||+++ ||||||||+|||++. ++.+||+|||+++... .. ....|
T Consensus 169 l~~~~~~~i~~qi~~~L~~lH~~~-ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~g 247 (365)
T 3e7e_A 169 MPQGLVISFAMRMLYMIEQVHDCE-IIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCE 247 (365)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSC
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecC
Confidence 578899999999999999999999 999999999999988 8999999999996532 11 24568
Q ss_pred CCcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhc
Q 019495 64 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 143 (340)
Q Consensus 64 ~~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 143 (340)
|+.|+|||++.+..++.++|||||||++|||+||+.||....... .. ....+. .. ..+..+.+++..|++
T Consensus 248 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~------~~-~~~~~~-~~--~~~~~~~~~~~~~l~ 317 (365)
T 3e7e_A 248 TSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE------CK-PEGLFR-RL--PHLDMWNEFFHVMLN 317 (365)
T ss_dssp TTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE------EE-ECSCCT-TC--SSHHHHHHHHHHHHC
T ss_pred CCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc------ee-echhcc-cc--CcHHHHHHHHHHHcC
Confidence 999999999998889999999999999999999999885432211 00 111111 11 235778999999999
Q ss_pred cCCCCC-CCHHHHHHHhcccccC
Q 019495 144 YEPRER-PNPKSLVTALSPLQKE 165 (340)
Q Consensus 144 ~~p~~R-ps~~~i~~~L~~~~~~ 165 (340)
.+|.+| |++.++.+.|+.+...
T Consensus 318 ~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 318 IPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp CCCTTCCCCHHHHHHHHHHHHHH
T ss_pred CCCCCcchHHHHHHHHHHHHHHH
Confidence 999999 6788888888877543
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.6e-29 Score=224.64 Aligned_cols=156 Identities=19% Similarity=0.266 Sum_probs=104.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhC-CCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC---ccccCCcccCcccc---
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYL--- 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~-~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~--- 73 (340)
+++..+..++.|++.||.|||++ + |+||||||+||+++.++.+||+|||+++...... ...+|+.|+|||++
T Consensus 122 ~~~~~~~~i~~~i~~~l~~lH~~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 200 (327)
T 3aln_A 122 IPEEILGKITLATVKALNHLKENLK-IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPS 200 (327)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHS-CCCSCCCGGGEEEETTTEEEECCCSSSCC-------------------------
T ss_pred CcHHHHHHHHHHHHHHHHHHhccCC-EeECCCCHHHEEEcCCCCEEEccCCCceecccccccccCCCCccccCceeeccc
Confidence 46778899999999999999998 8 9999999999999999999999999987654432 23678999999998
Q ss_pred -cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 74 -RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 74 -~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.+..++.++||||||+++|+|++|+.||..................+.+.......++..+.+++.+||+.||++||++
T Consensus 201 ~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~ 280 (327)
T 3aln_A 201 ASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKY 280 (327)
T ss_dssp -----CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred cCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCH
Confidence 4456899999999999999999999988653221110111111111111222233467899999999999999999999
Q ss_pred HHHHH
Q 019495 153 KSLVT 157 (340)
Q Consensus 153 ~~i~~ 157 (340)
.++++
T Consensus 281 ~ell~ 285 (327)
T 3aln_A 281 KELLK 285 (327)
T ss_dssp HHHTT
T ss_pred HHHHh
Confidence 99975
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3e-29 Score=232.14 Aligned_cols=155 Identities=17% Similarity=0.191 Sum_probs=123.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCccccc-
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLR- 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~- 74 (340)
+++.....++.||+.||.|||+.+ ||||||||+|||++.+|.+||+|||+++...... ...||+.|+|||++.
T Consensus 172 l~e~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 250 (437)
T 4aw2_A 172 LPEEMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQA 250 (437)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhh
Confidence 467888999999999999999999 9999999999999999999999999997654332 357899999999987
Q ss_pred ----CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCC--
Q 019495 75 ----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRE-- 148 (340)
Q Consensus 75 ----~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~-- 148 (340)
.+.++.++|||||||++|||++|+.||....................+ +.....++..+.++|.+||..+|++
T Consensus 251 ~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~-p~~~~~~s~~~~dLi~~lL~~~~~r~~ 329 (437)
T 4aw2_A 251 MEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQF-PTQVTDVSENAKDLIRRLICSREHRLG 329 (437)
T ss_dssp HHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCC-CSSCCCSCHHHHHHHHTTSSCGGGCTT
T ss_pred cccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccC-CcccccCCHHHHHHHHHHhcccccccC
Confidence 456899999999999999999999999876544333322221111011 1122346688999999999888888
Q ss_pred CCCHHHHHH
Q 019495 149 RPNPKSLVT 157 (340)
Q Consensus 149 Rps~~~i~~ 157 (340)
||++.+++.
T Consensus 330 r~~~~eil~ 338 (437)
T 4aw2_A 330 QNGIEDFKK 338 (437)
T ss_dssp TTTTHHHHT
T ss_pred CCCHHHHhC
Confidence 999999986
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-28 Score=223.16 Aligned_cols=162 Identities=22% Similarity=0.278 Sum_probs=124.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHH--hCCCccccCCCCCCEEecC-CCCeEEeccCCCccCCCCC---ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCT--SKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH--~~~~iiH~dlk~~nill~~-~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~ 74 (340)
+++.....++.||+.||.||| +.+ |+||||||+||+++. ++.+||+|||+++...... ...+|+.|+|||++.
T Consensus 126 ~~~~~~~~~~~qi~~al~~lH~~~~~-ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~ 204 (360)
T 3e3p_A 126 PPPILIKVFLFQLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIF 204 (360)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTSTTTC-CBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHhCCCCC-eecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHc
Confidence 356678889999999999999 999 999999999999996 8999999999998665432 446799999999987
Q ss_pred CC-CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccc--------------------------cccCCCCC
Q 019495 75 TG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD--------------------------SCLEGQFT 127 (340)
Q Consensus 75 ~~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~ 127 (340)
+. .++.++|||||||++|+|++|+.||...............+.. .......+
T Consensus 205 ~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (360)
T 3e3p_A 205 GNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHS 284 (360)
T ss_dssp TCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCC
T ss_pred CCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhh
Confidence 64 4899999999999999999999998765332222111110000 00111223
Q ss_pred chhHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccccC
Q 019495 128 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 165 (340)
Q Consensus 128 ~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 165 (340)
...+..+.+++.+||+.||.+|||+.++++ +++...
T Consensus 285 ~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~--hp~f~~ 320 (360)
T 3e3p_A 285 LKDAKEAYDLLSALLQYLPEERMKPYEALC--HPYFDE 320 (360)
T ss_dssp CTTHHHHHHHHHHHTCSSGGGSCCHHHHTT--SGGGGG
T ss_pred ccccHHHHHHHHHHhccCccccCCHHHHhc--Cccccc
Confidence 346789999999999999999999999985 444433
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.6e-29 Score=223.27 Aligned_cols=153 Identities=18% Similarity=0.206 Sum_probs=122.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC----CeEEeccCCCccCCCC---CccccCCcccCccccc
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~----~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~ 74 (340)
++..+..++.||+.||.|||+.+ |+||||||+||+++.++ .+||+|||+++..... ....+|+.|+|||++.
T Consensus 113 ~~~~~~~i~~qi~~aL~~lH~~~-ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~ 191 (321)
T 2a2a_A 113 SEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191 (321)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC-eecCCCChHHEEEecCCCCcCCEEEccCccceecCccccccccCCCCCccCccccc
Confidence 57788999999999999999999 99999999999999887 7999999999876544 2346899999999999
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+..++.++||||||+++|+|++|..||................. ......+...+..+.+++.+||+.||++|||+.+
T Consensus 192 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e 269 (321)
T 2a2a_A 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSY--DFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQE 269 (321)
T ss_dssp TCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC--CCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHH
T ss_pred CCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhccc--ccChhhhcccCHHHHHHHHHHcCCChhhCcCHHH
Confidence 88899999999999999999999999876544332222111110 0011111234578999999999999999999999
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
++.
T Consensus 270 ~l~ 272 (321)
T 2a2a_A 270 ALR 272 (321)
T ss_dssp HHH
T ss_pred Hhc
Confidence 986
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.3e-29 Score=231.02 Aligned_cols=98 Identities=18% Similarity=0.282 Sum_probs=84.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----------------------
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---------------------- 58 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---------------------- 58 (340)
|++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 126 l~~~~~~~i~~qil~aL~~LH~~g-ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (432)
T 3n9x_A 126 LTEEHIKTILYNLLLGENFIHESG-IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNL 204 (432)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEEC-------------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccch
Confidence 577889999999999999999999 999999999999999999999999999865432
Q ss_pred ----CccccCCcccCcccc-cCCCCCCCcceehHHHHHHHHhhCCC
Q 019495 59 ----KSYSTNLAFTPPEYL-RTGRVTPESVIYSFGTLLLDLLSGKH 99 (340)
Q Consensus 59 ----~~~~~~~~y~aPE~~-~~~~~~~~~Di~s~G~il~el~~g~~ 99 (340)
....+|+.|+|||++ .+..++.++|||||||++|||++|..
T Consensus 205 ~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~ 250 (432)
T 3n9x_A 205 KKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQ 250 (432)
T ss_dssp ------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCT
T ss_pred hccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccc
Confidence 345679999999986 44568999999999999999998543
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.8e-29 Score=228.98 Aligned_cols=164 Identities=17% Similarity=0.289 Sum_probs=116.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEe----cCCCCeEEeccCCCccCCCC-------CccccCCcccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF----DEDGNPRLSTFGLMKNSRDG-------KSYSTNLAFTP 69 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill----~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~y~a 69 (340)
+++..+..|+.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++..... ....+|+.|+|
T Consensus 125 l~~~~~~~i~~qi~~al~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 203 (405)
T 3rgf_A 125 LPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA 203 (405)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccC
Confidence 467788999999999999999999 9999999999999 67789999999999765432 23567999999
Q ss_pred cccccCC-CCCCCcceehHHHHHHHHhhCCCCCCcchhHH---------Hhhhhhccc--c-------------------
Q 019495 70 PEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDL---------IRDRNLQML--T------------------- 118 (340)
Q Consensus 70 PE~~~~~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~---------~~~~~~~~~--~------------------- 118 (340)
||++.+. .++.++|||||||++|+|++|+.||....... .....+..+ +
T Consensus 204 PE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~ 283 (405)
T 3rgf_A 204 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMK 283 (405)
T ss_dssp HHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHH
T ss_pred chhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhh
Confidence 9999874 58999999999999999999999985432110 000000000 0
Q ss_pred ---ccccC--------CCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccccCCC
Q 019495 119 ---DSCLE--------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 167 (340)
Q Consensus 119 ---~~~~~--------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~~ 167 (340)
..... .......+..+.+||.+||+.||.+|||+.++++ +++.....
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~--hp~f~~~~ 341 (405)
T 3rgf_A 284 DFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ--DPYFLEDP 341 (405)
T ss_dssp HCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT--SGGGTSSS
T ss_pred hccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc--ChhhccCC
Confidence 00000 0001112467889999999999999999999986 55555443
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-28 Score=217.78 Aligned_cols=154 Identities=19% Similarity=0.245 Sum_probs=124.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEe---cCCCCeEEeccCCCccCCCCC--ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDGK--SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill---~~~~~~kl~dfg~~~~~~~~~--~~~~~~~y~aPE~~~~ 75 (340)
+++.....++.||+.||.|||+.+ |+||||||+||++ +.++.+||+|||+++...... ...+++.|+|||++.+
T Consensus 103 ~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~ 181 (304)
T 2jam_A 103 YTEKDASLVIQQVLSAVKYLHENG-IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQ 181 (304)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHHHHSCCCBCCTTTBSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccccccCCCCccChHHhcc
Confidence 467888999999999999999999 9999999999999 788899999999987654332 3357999999999998
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i 155 (340)
..++.++||||||+++|+|++|..||.......+......... .........++..+.+++.+||..||++||++.++
T Consensus 182 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~ 259 (304)
T 2jam_A 182 KPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYY--EFESPFWDDISESAKDFICHLLEKDPNERYTCEKA 259 (304)
T ss_dssp CSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCC--CCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHH
T ss_pred CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC--CCCccccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 8899999999999999999999999876544333222211111 11222334566889999999999999999999999
Q ss_pred HH
Q 019495 156 VT 157 (340)
Q Consensus 156 ~~ 157 (340)
+.
T Consensus 260 l~ 261 (304)
T 2jam_A 260 LS 261 (304)
T ss_dssp HT
T ss_pred hc
Confidence 85
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=99.95 E-value=7.7e-29 Score=234.45 Aligned_cols=145 Identities=20% Similarity=0.336 Sum_probs=120.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.+|.+||+|||+++...... ...||+.|+|||++.+.
T Consensus 286 l~e~~~~~~~~qi~~aL~~LH~~g-IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 364 (543)
T 3c4z_A 286 FQEPRAIFYTAQIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE 364 (543)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHcC-CcccCCChHHEEEeCCCCEEEeecceeeeccCCCcccccccCCccccChhhhcCC
Confidence 467788899999999999999999 9999999999999999999999999998654432 34789999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchh----HHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.++.++|+|||||++|||++|+.||..... ..+....... ...++..++..+.++|.+||+.||.+||++
T Consensus 365 ~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 365 EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ------AVTYPDKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp CBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC------CCCCCTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred CCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc------ccCCCcccCHHHHHHHHHhccCCHhHCCCC
Confidence 899999999999999999999999876421 1111111111 123455677899999999999999999975
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-28 Score=221.93 Aligned_cols=156 Identities=18% Similarity=0.252 Sum_probs=119.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-CccccCCcccCcccccC-CCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRT-GRV 78 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~-~~~ 78 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||++.+ ..+
T Consensus 123 ~~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 201 (353)
T 3coi_A 123 FSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHY 201 (353)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTCCEEECSTTCTTC--------CCSBCCSCHHHHSCCSCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEeECCCCcEEEeecccccCCCCCccccccCcCcCCHHHHhCcCCC
Confidence 467889999999999999999999 999999999999999999999999998765433 34567999999999886 578
Q ss_pred CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhc-----------------------ccccc--ccCCCCCchhHHH
Q 019495 79 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------------------MLTDS--CLEGQFTDDDGTE 133 (340)
Q Consensus 79 ~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~-----------------------~~~~~--~~~~~~~~~~~~~ 133 (340)
+.++||||||+++|+|++|+.||.............. .+... ..........+..
T Consensus 202 ~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (353)
T 3coi_A 202 NQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQ 281 (353)
T ss_dssp CTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHH
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHH
Confidence 9999999999999999999999865432211111100 00000 0001123356789
Q ss_pred HHHHHHHhhccCCCCCCCHHHHHH
Q 019495 134 LVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 134 l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+.+++.+||+.||++|||+.+++.
T Consensus 282 ~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 282 AADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHHHcCCCcccCCCHHHHhc
Confidence 999999999999999999999985
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.6e-29 Score=224.07 Aligned_cols=152 Identities=22% Similarity=0.218 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC--CeEEeccCCCccCCC--------CCccccCCcccCccc
Q 019495 3 WAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG--NPRLSTFGLMKNSRD--------GKSYSTNLAFTPPEY 72 (340)
Q Consensus 3 ~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~--~~kl~dfg~~~~~~~--------~~~~~~~~~y~aPE~ 72 (340)
+.....++.||+.||.|||+++ |+||||||+||+++.++ .+||+|||+++.... .....+|+.|+|||+
T Consensus 167 ~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~ 245 (345)
T 3hko_A 167 EKLISNIMRQIFSALHYLHNQG-ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEV 245 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCC-ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchh
Confidence 4567789999999999999999 99999999999998766 899999999875422 123468999999999
Q ss_pred ccC--CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC
Q 019495 73 LRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150 (340)
Q Consensus 73 ~~~--~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 150 (340)
+.+ ..++.++||||||+++|+|++|+.||................. ..........+..+.+++.+||+.||.+||
T Consensus 246 ~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 323 (345)
T 3hko_A 246 LNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKL--CFENPNYNVLSPLARDLLSNLLNRNVDERF 323 (345)
T ss_dssp HTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC--CTTSGGGGGSCHHHHHHHHHHSCSCTTTSC
T ss_pred hccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhccc--ccCCcccccCCHHHHHHHHHHcCCChhHCC
Confidence 975 5688999999999999999999999876544332222222111 011111123568899999999999999999
Q ss_pred CHHHHHH
Q 019495 151 NPKSLVT 157 (340)
Q Consensus 151 s~~~i~~ 157 (340)
++.++++
T Consensus 324 s~~~~l~ 330 (345)
T 3hko_A 324 DAMRALQ 330 (345)
T ss_dssp CHHHHHH
T ss_pred CHHHHhc
Confidence 9999986
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.8e-29 Score=229.88 Aligned_cols=154 Identities=18% Similarity=0.217 Sum_probs=120.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCccccc-
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLR- 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~- 74 (340)
+++..+..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++...... ...||+.|+|||++.
T Consensus 159 l~~~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~ 237 (412)
T 2vd5_A 159 IPAEMARFYLAEIVMAIDSVHRLG-YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQA 237 (412)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeecccCHHHeeecCCCCEEEeechhheeccCCCccccceeccccCcCCHHHHhh
Confidence 467788899999999999999999 9999999999999999999999999997654432 357899999999997
Q ss_pred ------CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCC
Q 019495 75 ------TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 148 (340)
Q Consensus 75 ------~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~ 148 (340)
++.++.++|+|||||++|||++|+.||.......+.......... ...+..+..++..+.++|.+||. +|.+
T Consensus 238 ~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~-~~~p~~~~~~s~~~~dli~~lL~-~p~~ 315 (412)
T 2vd5_A 238 VGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEH-LSLPLVDEGVPEEARDFIQRLLC-PPET 315 (412)
T ss_dssp HHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH-CCCC----CCCHHHHHHHHTTSS-CGGG
T ss_pred cccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC-cCCCccccCCCHHHHHHHHHHcC-Chhh
Confidence 356899999999999999999999999776544333222211000 00111223466899999999999 9999
Q ss_pred C---CCHHHHHH
Q 019495 149 R---PNPKSLVT 157 (340)
Q Consensus 149 R---ps~~~i~~ 157 (340)
| |++.+|+.
T Consensus 316 Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 316 RLGRGGAGDFRT 327 (412)
T ss_dssp CTTTTTHHHHHT
T ss_pred cCCCCCHHHHhc
Confidence 8 58888875
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-29 Score=226.67 Aligned_cols=154 Identities=20% Similarity=0.288 Sum_probs=119.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-----CccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~ 75 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||++.+
T Consensus 156 ~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 234 (355)
T 1vzo_A 156 FTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRG 234 (355)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcC
Confidence 467788899999999999999999 999999999999999999999999998754322 23468999999999986
Q ss_pred C--CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC---
Q 019495 76 G--RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP--- 150 (340)
Q Consensus 76 ~--~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp--- 150 (340)
+ .++.++|||||||++|+|++|+.||...............+.. ....++..++..+.++|.+||+.||.+||
T Consensus 235 ~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~ 312 (355)
T 1vzo_A 235 GDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYPQEMSALAKDLIQRLLMKDPKKRLGCG 312 (355)
T ss_dssp CC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH--CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSS
T ss_pred CCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhc--cCCCCCcccCHHHHHHHHHHhhhCHHHhcCCC
Confidence 3 4788999999999999999999988643211100011111110 12234556678899999999999999999
Q ss_pred --CHHHHHH
Q 019495 151 --NPKSLVT 157 (340)
Q Consensus 151 --s~~~i~~ 157 (340)
++.++++
T Consensus 313 ~~s~~ell~ 321 (355)
T 1vzo_A 313 PRDADEIKE 321 (355)
T ss_dssp TTTHHHHHT
T ss_pred CCCHHHHHc
Confidence 8888876
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-28 Score=214.29 Aligned_cols=153 Identities=19% Similarity=0.221 Sum_probs=121.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEe---cCCCCeEEeccCCCccCCCCC---ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill---~~~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~ 74 (340)
+++..+..++.||+.||.|||+++ |+||||||+||++ +.++.+||+|||++....... ...+|+.|+|||++.
T Consensus 103 ~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~ 181 (277)
T 3f3z_A 103 FRESDAARIMKDVLSAVAYCHKLN-VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE 181 (277)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchhccCCCCCccChHHhc
Confidence 467889999999999999999999 9999999999999 788899999999987655432 446899999999987
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+ .++.++||||||+++|+|++|..||.................. ........++..+.+++.+||+.||++|||+.+
T Consensus 182 ~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~ 258 (277)
T 3f3z_A 182 G-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFT--FPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQ 258 (277)
T ss_dssp T-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC--CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred c-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC--CCchhhhcCCHHHHHHHHHHccCChhhCcCHHH
Confidence 4 5899999999999999999999998765433322222111100 000001134578999999999999999999999
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
+++
T Consensus 259 ~l~ 261 (277)
T 3f3z_A 259 ALE 261 (277)
T ss_dssp HTT
T ss_pred Hhc
Confidence 874
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.2e-29 Score=236.37 Aligned_cols=154 Identities=19% Similarity=0.333 Sum_probs=124.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC---ccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~~~ 77 (340)
+++..+..++.||+.||.|||+++ ||||||||+||+++.+|.+||+|||+++...... ...||+.|+|||++.+..
T Consensus 283 l~e~~~~~i~~qIl~aL~yLH~~g-IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~~ 361 (576)
T 2acx_A 283 FPEARAVFYAAEICCGLEDLHRER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNER 361 (576)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEECCCSCGGGCCHHHHTTCE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EeccCCchheEEEeCCCCeEEEecccceecccCccccccCCCccccCHHHHcCCC
Confidence 467888999999999999999999 9999999999999999999999999998765442 457899999999999888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC-----CH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP-----NP 152 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s~ 152 (340)
++.++|+|||||++|||++|..||...............+. .....++...+..+.++|.+||+.||.+|| ++
T Consensus 362 ~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~--~~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa 439 (576)
T 2acx_A 362 YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK--EVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSA 439 (576)
T ss_dssp ESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHH--HCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHH
T ss_pred CCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhh--cccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCH
Confidence 99999999999999999999999876421100000001111 112234556678999999999999999999 67
Q ss_pred HHHHH
Q 019495 153 KSLVT 157 (340)
Q Consensus 153 ~~i~~ 157 (340)
.+|++
T Consensus 440 ~eil~ 444 (576)
T 2acx_A 440 REVKE 444 (576)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 88774
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=9.8e-29 Score=218.53 Aligned_cols=151 Identities=19% Similarity=0.306 Sum_probs=124.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++...... ....+++.|+|||++.+.
T Consensus 116 ~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 194 (303)
T 3a7i_A 116 LDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS 194 (303)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChheEEECCCCCEEEeecccceecCccccccCccCCCcCccCHHHHhcC
Confidence 468889999999999999999999 999999999999999999999999998765443 234678999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++||||||+++|+|++|..||.............. ......+..++..+.+++.+||+.||.+|||+.+++
T Consensus 195 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll 269 (303)
T 3a7i_A 195 AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK-----NNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELL 269 (303)
T ss_dssp CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-----SCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHT
T ss_pred CCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhc-----CCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 899999999999999999999998865433222111111 112234445668899999999999999999999997
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
+
T Consensus 270 ~ 270 (303)
T 3a7i_A 270 K 270 (303)
T ss_dssp T
T ss_pred h
Confidence 5
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-29 Score=225.26 Aligned_cols=156 Identities=20% Similarity=0.284 Sum_probs=103.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC---CeEEeccCCCccCCCC----CccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG---NPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~---~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~ 73 (340)
+++.++..++.||+.||.|||+++ |+||||||+||+++.++ .+||+|||+++..... ....+|+.|+|||++
T Consensus 103 ~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~ 181 (325)
T 3kn6_A 103 FSETEASYIMRKLVSAVSHMHDVG-VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELL 181 (325)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEC----CEEEECCCTTCEECCC--------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCCCcCccCHHHh
Confidence 467889999999999999999999 99999999999997665 7999999999865433 234578999999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHh---hhhhcccccccc--CCCCCchhHHHHHHHHHHhhccCCCC
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR---DRNLQMLTDSCL--EGQFTDDDGTELVRLASRCLQYEPRE 148 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~~p~~ 148 (340)
.+..++.++||||||+++|+|++|..||......... ......+..... .......++..+.+++.+||+.||.+
T Consensus 182 ~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~ 261 (325)
T 3kn6_A 182 NQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNK 261 (325)
T ss_dssp --CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTT
T ss_pred cCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhH
Confidence 9888999999999999999999999998653221000 000111111110 10111234688999999999999999
Q ss_pred CCCHHHHHH
Q 019495 149 RPNPKSLVT 157 (340)
Q Consensus 149 Rps~~~i~~ 157 (340)
|||+.+++.
T Consensus 262 Rpt~~ell~ 270 (325)
T 3kn6_A 262 RLKMSGLRY 270 (325)
T ss_dssp CCCTTTSTT
T ss_pred CCCHHHHhc
Confidence 999999874
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-28 Score=223.81 Aligned_cols=154 Identities=21% Similarity=0.280 Sum_probs=120.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccC--
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRT-- 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~-- 75 (340)
+++..+..++.||+.||.|||+.| |+||||||+||+++.+|.+||+|||++...... ....||+.|+|||++.+
T Consensus 197 l~~~~~~~i~~qi~~~L~~LH~~g-i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 275 (365)
T 2y7j_A 197 LSEKETRSIMRSLLEAVSFLHANN-IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSM 275 (365)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEEecCcccccCCCcccccCCCCCCccChhhccccc
Confidence 467889999999999999999999 999999999999999999999999998765543 24568999999999863
Q ss_pred ----CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 76 ----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 76 ----~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
..++.++|||||||++|+|++|..||.................. .........+..+.+++.+||+.||++|||
T Consensus 276 ~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rps 353 (365)
T 2y7j_A 276 DETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQ--FSSPEWDDRSSTVKDLISRLLQVDPEARLT 353 (365)
T ss_dssp CTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCHHHHSSSCHHHHHHHHHHSCSSTTTSCC
T ss_pred cccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC--CCCcccccCCHHHHHHHHHHcCCChhHCcC
Confidence 35788999999999999999999998764332222111111000 000001234577999999999999999999
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.++++
T Consensus 354 ~~ell~ 359 (365)
T 2y7j_A 354 AEQALQ 359 (365)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999986
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.1e-29 Score=224.29 Aligned_cols=156 Identities=15% Similarity=0.213 Sum_probs=102.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC---CCCeEEeccCCCccCCCC--CccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~---~~~~kl~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~ 75 (340)
+++.++..++.||+.||.|||+++ |+||||||+||+++. ++.+||+|||+++..... ....+|+.|+|||++.+
T Consensus 125 l~~~~~~~i~~ql~~~l~~LH~~~-ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~ 203 (336)
T 3fhr_A 125 FTEREAAEIMRDIGTAIQFLHSHN-IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGP 203 (336)
T ss_dssp CBHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC----------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEEecCCCceEEEeccccceeccccccccCCCCcCccChhhhCC
Confidence 467889999999999999999999 999999999999975 455999999999765543 24467899999999988
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccc--ccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS--CLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
..++.++||||||+++|+|++|..||...............+... .........++..+.+++.+||+.||.+|||+.
T Consensus 204 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 283 (336)
T 3fhr_A 204 EKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTIT 283 (336)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred CCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHH
Confidence 888999999999999999999999986543332211111111111 111112234678899999999999999999999
Q ss_pred HHHH
Q 019495 154 SLVT 157 (340)
Q Consensus 154 ~i~~ 157 (340)
++++
T Consensus 284 ell~ 287 (336)
T 3fhr_A 284 QFMN 287 (336)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9986
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.6e-29 Score=223.06 Aligned_cols=160 Identities=19% Similarity=0.289 Sum_probs=127.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC---CCCeEEeccCCCccCCC------CCccccCCcccCcc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRD------GKSYSTNLAFTPPE 71 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~---~~~~kl~dfg~~~~~~~------~~~~~~~~~y~aPE 71 (340)
+++..++.++.||+.||.|||+++ |+||||||+||+++. ++.+||+|||+++.... .....+++.|+|||
T Consensus 137 ~~~~~~~~i~~qi~~al~~LH~~~-i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE 215 (327)
T 2yfx_A 137 LAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 215 (327)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHH
T ss_pred ccHHHHHHHHHHHHHHHHHHhhCC-eecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHh
Confidence 467789999999999999999999 999999999999984 44699999998864322 12345688999999
Q ss_pred cccCCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC
Q 019495 72 YLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150 (340)
Q Consensus 72 ~~~~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 150 (340)
++.+..++.++||||||+++|+|++ |..||............... .....+..++..+.+++.+||+.||.+||
T Consensus 216 ~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rp 290 (327)
T 2yfx_A 216 AFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG-----GRMDPPKNCPGPVYRIMTQCWQHQPEDRP 290 (327)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred HhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcC-----CCCCCCCCCCHHHHHHHHHHhcCChhhCc
Confidence 9988889999999999999999998 88887655433222211111 12233455678899999999999999999
Q ss_pred CHHHHHHHhcccccCC
Q 019495 151 NPKSLVTALSPLQKET 166 (340)
Q Consensus 151 s~~~i~~~L~~~~~~~ 166 (340)
++.++++.|..+....
T Consensus 291 s~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 291 NFAIILERIEYCTQDP 306 (327)
T ss_dssp CHHHHHHHHHHHHHCH
T ss_pred CHHHHHHHHHHHhcCH
Confidence 9999999998876554
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.6e-29 Score=222.32 Aligned_cols=156 Identities=18% Similarity=0.253 Sum_probs=115.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEec-----CCCCeEEeccCCCccCCCC----CccccCCcccCcc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-----EDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPE 71 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~-----~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE 71 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++ .++.+||+|||+++..... ....+|+.|+|||
T Consensus 129 ~~~~~~~~i~~ql~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE 207 (329)
T 3gbz_A 129 VSMRVIKSFLYQLINGVNFCHSRR-CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPE 207 (329)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-----------CCTTCCHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcccccCCCcCCccccCHH
Confidence 467888999999999999999999 99999999999994 4455999999998764422 2345789999999
Q ss_pred cccCC-CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccc--ccc----------cCCC------------C
Q 019495 72 YLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT--DSC----------LEGQ------------F 126 (340)
Q Consensus 72 ~~~~~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~--~~~----------~~~~------------~ 126 (340)
++.+. .++.++|||||||++|+|++|..||................. +.. .... .
T Consensus 208 ~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (329)
T 3gbz_A 208 ILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVL 287 (329)
T ss_dssp HHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHH
T ss_pred HhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhc
Confidence 99874 479999999999999999999999876533222211111100 000 0000 0
Q ss_pred CchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 127 TDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 127 ~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+..++..+.+++.+||+.||++|||+.++++
T Consensus 288 ~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 288 GALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 1114578999999999999999999999985
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-28 Score=220.83 Aligned_cols=156 Identities=17% Similarity=0.223 Sum_probs=119.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC-CeEEeccCCCccCCCC---CccccCCcccCcccccC-
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRT- 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~-~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~- 75 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++ .+||+|||+++..... ....++..|+|||++.+
T Consensus 127 ~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~ 205 (330)
T 3nsz_A 127 LTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 205 (330)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccccccccccccChhhhcCC
Confidence 467788999999999999999999 99999999999999776 7999999999865433 24467889999999987
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHH--Hh-------hhhhcc-----------------------ccccccC
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL--IR-------DRNLQM-----------------------LTDSCLE 123 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~--~~-------~~~~~~-----------------------~~~~~~~ 123 (340)
..++.++|||||||++|+|++|+.||....... +. ...... .......
T Consensus 206 ~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (330)
T 3nsz_A 206 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 285 (330)
T ss_dssp CCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCC
T ss_pred CcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhcc
Confidence 568999999999999999999999884321110 00 000000 0000111
Q ss_pred CCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 124 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 124 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
...+..++..+.++|.+||+.||.+|||+.++++
T Consensus 286 ~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 286 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp TTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1122335688999999999999999999999986
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.8e-29 Score=217.78 Aligned_cols=155 Identities=20% Similarity=0.278 Sum_probs=123.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCC----ccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGR----ALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEY 72 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~----iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~ 72 (340)
+++..+..++.||+.||.|||+++. |+||||||+||+++.++.+||+|||+++...... ...+++.|+|||+
T Consensus 108 ~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~ 187 (279)
T 2w5a_A 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQ 187 (279)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccccccccccCCCccccChHH
Confidence 4788899999999999999999763 9999999999999999999999999987655443 2357899999999
Q ss_pred ccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 73 LRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 73 ~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
+.+..++.++||||||+++|+|++|+.||.......+....... ....++..++..+.+++.+||+.||.+||++
T Consensus 188 ~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~ 262 (279)
T 2w5a_A 188 MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG-----KFRRIPYRYSDELNEIITRMLNLKDYHRPSV 262 (279)
T ss_dssp HHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-----CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred hccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhc-----ccccCCcccCHHHHHHHHHHcCCCcccCCCH
Confidence 99888999999999999999999999988765433322221111 1123445567899999999999999999999
Q ss_pred HHHHHHhc
Q 019495 153 KSLVTALS 160 (340)
Q Consensus 153 ~~i~~~L~ 160 (340)
.++++.+.
T Consensus 263 ~~ll~~~~ 270 (279)
T 2w5a_A 263 EEILENPL 270 (279)
T ss_dssp HHHHTSTT
T ss_pred HHHHhChh
Confidence 99986443
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.5e-29 Score=223.00 Aligned_cols=156 Identities=15% Similarity=0.306 Sum_probs=117.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+++.|+|||++.+.
T Consensus 121 ~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~ 199 (331)
T 4aaa_A 121 LDYQVVQKYLFQIINGIGFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGD 199 (331)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCTTC------------CCCCCTTCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EEccCcChheEEEcCCCcEEEEeCCCceeecCCccccCCCcCCccccCcccccCC
Confidence 467889999999999999999999 999999999999999999999999998764432 234678999999999865
Q ss_pred -CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhc--------------------cccccccCCC-----CCchh
Q 019495 77 -RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------------MLTDSCLEGQ-----FTDDD 130 (340)
Q Consensus 77 -~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~-----~~~~~ 130 (340)
.++.++||||||+++|+|++|+.||.............. ....+..... ..+.+
T Consensus 200 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (331)
T 4aaa_A 200 VKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKL 279 (331)
T ss_dssp TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTS
T ss_pred CCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccch
Confidence 689999999999999999999999876533221111100 0000000000 11235
Q ss_pred HHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 131 GTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 131 ~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+..+.+++.+||+.||++|||+.++++
T Consensus 280 ~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 280 SEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred hHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 688999999999999999999999875
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=99.95 E-value=6.8e-29 Score=223.23 Aligned_cols=154 Identities=22% Similarity=0.322 Sum_probs=120.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC-CC---CeEEeccCCCccCCCC----CccccCCcccCccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DG---NPRLSTFGLMKNSRDG----KSYSTNLAFTPPEY 72 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~-~~---~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~ 72 (340)
+++.....++.||+.||.|||+++ |+||||||+||++.. ++ .+||+|||+++..... .+..+|+.|+|||+
T Consensus 113 ~~~~~~~~~~~qi~~al~~lH~~g-ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~ 191 (342)
T 2qr7_A 113 FSEREASAVLFTITKTVEYLHAQG-VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEV 191 (342)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCceeccCCCccccCHHH
Confidence 467888999999999999999999 999999999999843 33 4999999999865433 24567999999999
Q ss_pred ccCCCCCCCcceehHHHHHHHHhhCCCCCCcch---hHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCC
Q 019495 73 LRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA---LDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 149 (340)
Q Consensus 73 ~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R 149 (340)
+.+..++.++|||||||++|+|++|..||.... ...+........ ..+....+..++..+.+++.+||..||++|
T Consensus 192 ~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 269 (342)
T 2qr7_A 192 LERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGK--FSLSGGYWNSVSDTAKDLVSKMLHVDPHQR 269 (342)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCC--CCCCSTTTTTSCHHHHHHHHHHTCSSTTTS
T ss_pred hcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCC--cccCccccccCCHHHHHHHHHHCCCChhHC
Confidence 987778899999999999999999999986521 111111111110 011222334567899999999999999999
Q ss_pred CCHHHHHH
Q 019495 150 PNPKSLVT 157 (340)
Q Consensus 150 ps~~~i~~ 157 (340)
|++.++++
T Consensus 270 ~t~~~il~ 277 (342)
T 2qr7_A 270 LTAALVLR 277 (342)
T ss_dssp CCHHHHTT
T ss_pred cCHHHHhc
Confidence 99999875
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-28 Score=214.10 Aligned_cols=150 Identities=21% Similarity=0.291 Sum_probs=116.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC---ccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~~~ 77 (340)
+++.....++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++....... ...+++.|+|||++.+..
T Consensus 108 ~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 186 (276)
T 2h6d_A 108 VEEMEARRLFQQILSAVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRL 186 (276)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHC-SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-------------CCTGGGTTSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChhhEEECCCCCEEEeecccccccCCCcceecccCCccccCHHHHcCCC
Confidence 467888999999999999999999 9999999999999999999999999987765432 346789999999998765
Q ss_pred C-CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 78 V-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 78 ~-~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
+ +.++||||||+++|+|++|..||............... ....+...+..+.+++.+||+.||++|||+.+++
T Consensus 187 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l 260 (276)
T 2h6d_A 187 YAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG------VFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIR 260 (276)
T ss_dssp CCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcC------cccCchhcCHHHHHHHHHHccCChhhCCCHHHHH
Confidence 4 68999999999999999999998765433322211111 1123444568899999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
+
T Consensus 261 ~ 261 (276)
T 2h6d_A 261 E 261 (276)
T ss_dssp H
T ss_pred h
Confidence 6
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.9e-29 Score=240.99 Aligned_cols=157 Identities=22% Similarity=0.317 Sum_probs=127.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...+++.|+|||++.+
T Consensus 488 l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~ 566 (656)
T 2j0j_A 488 LDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 566 (656)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----------CCGGGCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-ccccccchHhEEEeCCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcC
Confidence 467889999999999999999999 9999999999999999999999999998765432 2245678999999988
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
..++.++||||||+++|||++ |..||.+............. .....+..++..+.+++.+||+.||++|||+.+
T Consensus 567 ~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~e 641 (656)
T 2j0j_A 567 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG-----ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTE 641 (656)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-----CCCCCCccccHHHHHHHHHHcCCChhHCcCHHH
Confidence 889999999999999999997 88888664333222111111 122345567789999999999999999999999
Q ss_pred HHHHhcccc
Q 019495 155 LVTALSPLQ 163 (340)
Q Consensus 155 i~~~L~~~~ 163 (340)
+++.|+.+.
T Consensus 642 l~~~L~~il 650 (656)
T 2j0j_A 642 LKAQLSTIL 650 (656)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998764
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-28 Score=217.40 Aligned_cols=156 Identities=17% Similarity=0.241 Sum_probs=116.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccC-
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRT- 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~- 75 (340)
+++.....++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||++.+
T Consensus 99 ~~~~~~~~i~~~l~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 177 (311)
T 4agu_A 99 VPEHLVKSITWQTLQAVNFCHKHN-CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGD 177 (311)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECC------------GGGCCHHHHHTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCCCcCCccccChHHHhcC
Confidence 467888999999999999999999 999999999999999999999999999765432 23467899999999976
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccc-----------------ccccCC--C------CCchh
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT-----------------DSCLEG--Q------FTDDD 130 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~--~------~~~~~ 130 (340)
..++.++||||||+++|+|++|..||...............+. ...... . ....+
T Consensus 178 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (311)
T 4agu_A 178 TQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNI 257 (311)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTC
T ss_pred CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccc
Confidence 5679999999999999999999999876533221111100000 000000 0 01235
Q ss_pred HHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 131 GTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 131 ~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+..+.+++.+||+.||.+|||+.++++
T Consensus 258 ~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 258 SYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp CHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 677999999999999999999999985
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.9e-28 Score=212.68 Aligned_cols=153 Identities=16% Similarity=0.240 Sum_probs=120.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-CccccCCCCCCEEec-CCCCeEEeccCCCccCCCCC--ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDGK--SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~-~iiH~dlk~~nill~-~~~~~kl~dfg~~~~~~~~~--~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+.+ +|+||||||+||+++ .++.+||+|||++....... ...+|+.|+|||++. +
T Consensus 126 ~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~-~ 204 (290)
T 1t4h_A 126 MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYE-E 204 (290)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGG-T
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccccccccCCcCcCCHHHHh-c
Confidence 467888999999999999999985 499999999999997 78999999999987654432 346899999999987 5
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++||||||+++|+|++|+.||................ .....++...++.+.+++.+||+.||.+|||+.+++
T Consensus 205 ~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 281 (290)
T 1t4h_A 205 KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSG---VKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 281 (290)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTT---CCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhcc---CCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 68999999999999999999999986532221111111111 111122333447899999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
+
T Consensus 282 ~ 282 (290)
T 1t4h_A 282 N 282 (290)
T ss_dssp T
T ss_pred h
Confidence 5
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-28 Score=216.30 Aligned_cols=153 Identities=16% Similarity=0.178 Sum_probs=122.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++...... ....+++.|+|||++.+.
T Consensus 122 ~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 200 (314)
T 3com_A 122 LTEDEIATILQSTLKGLEYLHFMR-KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI 200 (314)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-CcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCccCCCCCccChhhcCCC
Confidence 467889999999999999999999 999999999999999999999999998765433 234678999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++||||||+++|+|++|..||............ ..... .....+...+..+.+++.+||+.||.+|||+.+++
T Consensus 201 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll 277 (314)
T 3com_A 201 GYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMI-PTNPP--PTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLL 277 (314)
T ss_dssp CBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-HHSCC--CCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHT
T ss_pred CCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-hcCCC--cccCCcccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 8999999999999999999999988654322211111 11111 11112334568899999999999999999999997
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
+
T Consensus 278 ~ 278 (314)
T 3com_A 278 Q 278 (314)
T ss_dssp T
T ss_pred h
Confidence 5
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.9e-29 Score=225.01 Aligned_cols=156 Identities=14% Similarity=0.252 Sum_probs=115.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccC-C
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRT-G 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~-~ 76 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||++.+ .
T Consensus 131 ~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~ 209 (362)
T 3pg1_A 131 ISPQHIQYFMYHILLGLHVLHEAG-VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFK 209 (362)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCTTC---------------CGGGCCHHHHTTCT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCc-CEecCCChHHEEEcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCC
Confidence 467889999999999999999999 999999999999999999999999998754433 23467899999999886 5
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccc-------------------ccccC-------CCCCchh
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT-------------------DSCLE-------GQFTDDD 130 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~-------~~~~~~~ 130 (340)
.++.++|||||||++|+|++|+.||................. ..... ...+...
T Consensus 210 ~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (362)
T 3pg1_A 210 GFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTA 289 (362)
T ss_dssp TCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTS
T ss_pred CCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCC
Confidence 689999999999999999999999876533222111111000 00000 0112234
Q ss_pred HHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 131 GTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 131 ~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
++.+.+++.+||+.||.+|||+.++++
T Consensus 290 ~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 290 DPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 578999999999999999999999986
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-28 Score=229.16 Aligned_cols=153 Identities=18% Similarity=0.196 Sum_probs=121.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEec---CCCCeEEeccCCCccCCCC---CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD---EDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~---~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~ 74 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++ .++.+||+|||+++..... ....||+.|+|||++.
T Consensus 118 ~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~ 196 (486)
T 3mwu_A 118 FSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR 196 (486)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----CCTTGGGGCCGGGGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhC
Confidence 467889999999999999999999 99999999999995 4567999999998765443 2456899999999997
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+ .++.++||||+||++|+|++|..||.+.....+.......... ........++..+.++|.+||+.||.+|||+.+
T Consensus 197 ~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ 273 (486)
T 3mwu_A 197 G-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYA--FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQ 273 (486)
T ss_dssp S-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--SCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred C-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CCCcccCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 4 6899999999999999999999999775443332222111110 111112345688999999999999999999999
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
+++
T Consensus 274 ~l~ 276 (486)
T 3mwu_A 274 CLE 276 (486)
T ss_dssp HHH
T ss_pred Hhc
Confidence 986
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=3e-28 Score=217.54 Aligned_cols=152 Identities=13% Similarity=0.151 Sum_probs=115.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCccccc--
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLR-- 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~-- 74 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++.+||+|||++...... ....+++.|+|||++.
T Consensus 126 ~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 204 (326)
T 2x7f_A 126 LKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACD 204 (326)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCTTTC-------------CCGGGCCHHHHC--
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ccccCCcHHHEEEcCCCCEEEeeCcCceecCcCccccccccCCccccChhhhccc
Confidence 467788899999999999999999 999999999999999999999999998765432 2446899999999987
Q ss_pred ---CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 75 ---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 75 ---~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
+..++.++||||||+++|+|++|..||............... ......+..++..+.+++.+||..||.+||+
T Consensus 205 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 280 (326)
T 2x7f_A 205 ENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN----PAPRLKSKKWSKKFQSFIESCLVKNHSQRPA 280 (326)
T ss_dssp ------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS----CCCCCSCSCSCHHHHHHHHHHCCSSGGGSCC
T ss_pred cccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcC----ccccCCccccCHHHHHHHHHHhccChhhCCC
Confidence 456889999999999999999999988654332211111111 1111123445688999999999999999999
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.++++
T Consensus 281 ~~~ll~ 286 (326)
T 2x7f_A 281 TEQLMK 286 (326)
T ss_dssp HHHHHT
T ss_pred HHHHhh
Confidence 999985
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-28 Score=218.52 Aligned_cols=152 Identities=21% Similarity=0.350 Sum_probs=117.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
+++..+..++.||+.||.|||+++ |+||||||+||++++ +.+||+|||+++...... ...+++.|+|||++.
T Consensus 124 ~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 201 (313)
T 3cek_A 124 IDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 201 (313)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEET-TEEEECCCSSSCC--------------CCGGGCCHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEEEC-CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHh
Confidence 467788999999999999999999 999999999999964 789999999988654332 345789999999987
Q ss_pred C-----------CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhc
Q 019495 75 T-----------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 143 (340)
Q Consensus 75 ~-----------~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 143 (340)
+ ..++.++||||||+++|+|++|+.||......... ............++...+..+.+++.+||+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 278 (313)
T 3cek_A 202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK---LHAIIDPNHEIEFPDIPEKDLQDVLKCCLK 278 (313)
T ss_dssp TCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH---HHHHHCTTSCCCCCCCSCHHHHHHHHHHTC
T ss_pred hcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHH---HHHHHhcccccCCcccchHHHHHHHHHHcc
Confidence 5 36788999999999999999999988654222111 111222222333444556889999999999
Q ss_pred cCCCCCCCHHHHHH
Q 019495 144 YEPRERPNPKSLVT 157 (340)
Q Consensus 144 ~~p~~Rps~~~i~~ 157 (340)
.||++||++.++++
T Consensus 279 ~dp~~Rps~~ell~ 292 (313)
T 3cek_A 279 RDPKQRISIPELLA 292 (313)
T ss_dssp SSTTTSCCHHHHHT
T ss_pred CCcccCcCHHHHhc
Confidence 99999999999985
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=7.3e-29 Score=221.16 Aligned_cols=144 Identities=23% Similarity=0.408 Sum_probs=119.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEec-CCCCeEEeccCCCccCCCC--CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~-~~~~~kl~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~ 77 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++ .++.+||+|||+++..... ....+|+.|+|||++.+..
T Consensus 146 l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 224 (320)
T 3a99_A 146 LQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHR 224 (320)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cEeCCCCHHHEEEeCCCCCEEEeeCccccccccccccCCCCCccCCChHHhccCC
Confidence 467788999999999999999999 99999999999999 7889999999998866543 2456899999999998766
Q ss_pred C-CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 78 V-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 78 ~-~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
+ +.++||||||+++|+|++|+.||..... .... ...++..++..+.+++.+||+.||++|||+.+++
T Consensus 225 ~~~~~~Di~slG~il~el~~g~~pf~~~~~--~~~~----------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll 292 (320)
T 3a99_A 225 YHGRSAAVWSLGILLYDMVCGDIPFEHDEE--IIRG----------QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQ 292 (320)
T ss_dssp BCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HHHC----------CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCccchHHhHHHHHHHHHHCCCCCCChhh--hhcc----------cccccccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 5 6789999999999999999998865321 1100 1123344568899999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
+
T Consensus 293 ~ 293 (320)
T 3a99_A 293 N 293 (320)
T ss_dssp T
T ss_pred c
Confidence 6
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=9.2e-29 Score=224.08 Aligned_cols=156 Identities=19% Similarity=0.271 Sum_probs=119.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhC-CCccccCCCCCCEEecCCCCeEEeccCCCccCC--CCCccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR--DGKSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~-~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~--~~~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.....++.||+.||.|||++ + |+||||||+||+++.++.+||+|||++.... ......+|+.|+|||++.+..
T Consensus 128 ~~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 206 (360)
T 3eqc_A 128 IPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTH 206 (360)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----CCCCTTCCHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCC-EEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCCCCCCeECHHHHcCCC
Confidence 46778899999999999999996 8 9999999999999999999999999986432 223457899999999999888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhh--------------------------------------ccccc
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--------------------------------------QMLTD 119 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~--------------------------------------~~~~~ 119 (340)
++.++||||||+++|+|++|+.||............. ..+..
T Consensus 207 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (360)
T 3eqc_A 207 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVN 286 (360)
T ss_dssp CSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHH
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhc
Confidence 9999999999999999999999986543322111100 00000
Q ss_pred cccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 120 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 120 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.......+..++..+.+++.+||+.||++|||+.++++
T Consensus 287 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 287 EPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp SCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 00011112234678999999999999999999999985
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-28 Score=212.61 Aligned_cols=153 Identities=18% Similarity=0.194 Sum_probs=119.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
+++..+..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++...... ....+++.|+|||++.
T Consensus 102 ~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 180 (276)
T 2yex_A 102 MPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180 (276)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGT
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHh
Confidence 467889999999999999999999 999999999999999999999999998754321 2346789999999998
Q ss_pred CCCC-CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~-~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..+ +.++||||||+++|+|++|..||............... ...........+..+.+++.+||+.||++|||+.
T Consensus 181 ~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 257 (276)
T 2yex_A 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE---KKTYLNPWKKIDSAPLALLHKILVENPSARITIP 257 (276)
T ss_dssp CSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHT---TCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred cCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhh---cccccCchhhcCHHHHHHHHHHCCCCchhCCCHH
Confidence 7664 77899999999999999999988654221111111111 0001111234567899999999999999999999
Q ss_pred HHHH
Q 019495 154 SLVT 157 (340)
Q Consensus 154 ~i~~ 157 (340)
++++
T Consensus 258 ~il~ 261 (276)
T 2yex_A 258 DIKK 261 (276)
T ss_dssp HHTT
T ss_pred HHhc
Confidence 9975
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-28 Score=228.07 Aligned_cols=155 Identities=16% Similarity=0.207 Sum_probs=113.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCC---CCeEEeccCCCccCCCC---CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~---~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~ 74 (340)
+++.+...++.||+.||.|||+++ |+||||||+||+++.+ +.+||+|||+++..... ....||+.|+|||++.
T Consensus 236 ~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~ 314 (419)
T 3i6u_A 236 LKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 314 (419)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC-----------CTTCCTTTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCCCcceEEEeecccceecCCCccccccCCCCCccCceeee
Confidence 468889999999999999999999 9999999999999654 45999999999876544 2456899999999986
Q ss_pred C---CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 75 T---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 75 ~---~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
+ ..++.++|||||||++|+|++|..||.................. .........++..+.+++.+||+.||++|||
T Consensus 315 ~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps 393 (419)
T 3i6u_A 315 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY-NFIPEVWAEVSEKALDLVKKLLVVDPKARFT 393 (419)
T ss_dssp ----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCC-CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred cCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCC-CCCchhhcccCHHHHHHHHHHccCChhHCcC
Confidence 4 56788999999999999999999998653221100000000000 0000111234578999999999999999999
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.++++
T Consensus 394 ~~e~l~ 399 (419)
T 3i6u_A 394 TEEALR 399 (419)
T ss_dssp HHHHHH
T ss_pred HHHHhC
Confidence 999986
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-28 Score=218.08 Aligned_cols=156 Identities=22% Similarity=0.353 Sum_probs=118.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---------CccccCCcccCcc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---------KSYSTNLAFTPPE 71 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---------~~~~~~~~y~aPE 71 (340)
+++..+..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++...... ....+|+.|+|||
T Consensus 118 ~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE 196 (303)
T 2vwi_A 118 LDESTIATILREVLEGLEYLHKNG-QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 196 (303)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-CCCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHH
Confidence 467889999999999999999999 999999999999999999999999987654322 2345789999999
Q ss_pred cccC-CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccc----ccccCCCCCchhHHHHHHHHHHhhccCC
Q 019495 72 YLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT----DSCLEGQFTDDDGTELVRLASRCLQYEP 146 (340)
Q Consensus 72 ~~~~-~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~li~~cl~~~p 146 (340)
++.+ ..++.++||||||+++|+|++|+.||................. ...........++..+.+++.+||+.||
T Consensus 197 ~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp 276 (303)
T 2vwi_A 197 VMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDP 276 (303)
T ss_dssp HHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSG
T ss_pred HhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCCh
Confidence 9875 4688999999999999999999998865432221111111110 0011112234456789999999999999
Q ss_pred CCCCCHHHHHH
Q 019495 147 RERPNPKSLVT 157 (340)
Q Consensus 147 ~~Rps~~~i~~ 157 (340)
.+||++.++++
T Consensus 277 ~~Rps~~~ll~ 287 (303)
T 2vwi_A 277 EKRPTAAELLR 287 (303)
T ss_dssp GGSCCHHHHHT
T ss_pred hhCcCHHHHhh
Confidence 99999999985
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-28 Score=215.14 Aligned_cols=152 Identities=15% Similarity=0.245 Sum_probs=120.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC-CCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~-~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
++.....++.||+.||.|||+++ ++||||||+||+++. ++.+||+|||+++..... ....+++.|+|||++.++
T Consensus 120 ~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 198 (295)
T 2clq_A 120 NEQTIGFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKG 198 (295)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHG
T ss_pred cHHHHHHHHHHHHHHHHHHHhCC-EEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccccCCCccccChhhhcCC
Confidence 46677889999999999999999 999999999999987 899999999998765432 345688999999999764
Q ss_pred C--CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 77 R--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 77 ~--~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
. ++.++||||||+++|+|++|+.||............. ........++..++..+.+++.+||+.||++||++.+
T Consensus 199 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ 275 (295)
T 2clq_A 199 PRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV---GMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACAND 275 (295)
T ss_dssp GGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHH---HHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhh---ccccccccccccCCHHHHHHHHHHccCChhhCCCHHH
Confidence 3 7889999999999999999999885432211110000 0011223445566789999999999999999999999
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
++.
T Consensus 276 ll~ 278 (295)
T 2clq_A 276 LLV 278 (295)
T ss_dssp HHT
T ss_pred Hhc
Confidence 985
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-28 Score=214.86 Aligned_cols=154 Identities=16% Similarity=0.193 Sum_probs=120.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC----CeEEeccCCCccCCCCC---ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~----~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~ 73 (340)
+++..+..++.||+.||.|||+++ ++||||||+||+++.++ .+||+|||++....... ...+++.|+|||++
T Consensus 105 ~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~ 183 (283)
T 3bhy_A 105 LTEDEATQFLKQILDGVHYLHSKR-IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 183 (283)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC--------CCCGGGCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCcccccCCCcCccCccee
Confidence 467889999999999999999999 99999999999998877 79999999988654432 34578999999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
.+..++.++||||||+++|+|++|..||................. ..........+..+.+++.+||+.||++||++.
T Consensus 184 ~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ 261 (283)
T 3bhy_A 184 NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNY--DFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIA 261 (283)
T ss_dssp TTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC--CCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHH
T ss_pred cCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhccc--CCcchhcccCCHHHHHHHHHHccCCHhHCcCHH
Confidence 988899999999999999999999999876543322221111100 001111123457899999999999999999999
Q ss_pred HHHH
Q 019495 154 SLVT 157 (340)
Q Consensus 154 ~i~~ 157 (340)
++++
T Consensus 262 ~~l~ 265 (283)
T 3bhy_A 262 QSLE 265 (283)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9986
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.8e-29 Score=228.28 Aligned_cols=164 Identities=10% Similarity=0.101 Sum_probs=126.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEe----cCCCCeEEeccCCCccCCCCC---ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF----DEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill----~~~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~ 73 (340)
+++..+..++.||+.||.|||+++ |+||||||+||++ +.++.+||+|||+++...... ...+|+.|+|||++
T Consensus 109 l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~ 187 (396)
T 4eut_A 109 LPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMY 187 (396)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCccccccCCccccCHHHh
Confidence 467889999999999999999999 9999999999999 777789999999998765442 44689999999998
Q ss_pred cC--------CCCCCCcceehHHHHHHHHhhCCCCCCcchh----HHHhhhhhccccc-------------------ccc
Q 019495 74 RT--------GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNLQMLTD-------------------SCL 122 (340)
Q Consensus 74 ~~--------~~~~~~~Di~s~G~il~el~~g~~~~~~~~~----~~~~~~~~~~~~~-------------------~~~ 122 (340)
.+ ..++.++|||||||++|||++|+.||..... ...........+. ...
T Consensus 188 ~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 267 (396)
T 4eut_A 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPV 267 (396)
T ss_dssp HHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCT
T ss_pred hccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCc
Confidence 64 4577899999999999999999998853211 1111111111000 001
Q ss_pred CCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccccC
Q 019495 123 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 165 (340)
Q Consensus 123 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 165 (340)
...++...+..+.+++.+||+.||++||++.++++.+..+...
T Consensus 268 ~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 268 SCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp TCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred ccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 1123456788999999999999999999999999888776543
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-28 Score=227.66 Aligned_cols=150 Identities=21% Similarity=0.253 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCC-------------CCeEEeccCCCccCCCCC--------cccc
Q 019495 5 MRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-------------GNPRLSTFGLMKNSRDGK--------SYST 63 (340)
Q Consensus 5 ~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~-------------~~~kl~dfg~~~~~~~~~--------~~~~ 63 (340)
..+.++.||+.||.|||+++ |+||||||+||+++.+ +.+||+|||+++...... ...|
T Consensus 116 ~~~~i~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~g 194 (434)
T 2rio_A 116 NPISLLRQIASGVAHLHSLK-IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSG 194 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------
T ss_pred hHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCC
Confidence 34679999999999999999 9999999999999754 479999999998765432 2468
Q ss_pred CCcccCcccccC-------CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhcccc-ccccCCCCCchhHHHH
Q 019495 64 NLAFTPPEYLRT-------GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTEL 134 (340)
Q Consensus 64 ~~~y~aPE~~~~-------~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l 134 (340)
|+.|+|||++.+ ..++.++|||||||++|||++ |..||........ ....... .+......+..++..+
T Consensus 195 t~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~ 272 (434)
T 2rio_A 195 TSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--NIIRGIFSLDEMKCLHDRSLIAEA 272 (434)
T ss_dssp CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH--HHHHTCCCCCCCTTCCCHHHHHHH
T ss_pred CCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH--HHhcCCCCcccccccccccchHHH
Confidence 999999999975 568899999999999999999 8878765422211 1111111 1111111234567899
Q ss_pred HHHHHHhhccCCCCCCCHHHHHH
Q 019495 135 VRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 135 ~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.+++.+||+.||.+|||+.+|+.
T Consensus 273 ~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 273 TDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHhhCChhhCCCHHHHHh
Confidence 99999999999999999999985
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-28 Score=231.07 Aligned_cols=153 Identities=19% Similarity=0.202 Sum_probs=122.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEe---cCCCCeEEeccCCCccCCCCC---ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill---~~~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~ 74 (340)
+++.....++.||+.||.|||+++ |+||||||+||++ +.++.+||+|||+++...... ...||+.|+|||++.
T Consensus 123 ~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~ 201 (484)
T 3nyv_A 123 FSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH 201 (484)
T ss_dssp CBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccccccCCCCccccCceeec
Confidence 467888999999999999999999 9999999999999 567889999999987655443 346899999999997
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+ .++.++||||+||++|+|++|..||.......+.......... ........++..+.+++.+||+.||.+|||+.+
T Consensus 202 ~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e 278 (484)
T 3nyv_A 202 G-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT--FELPQWKKVSESAKDLIRKMLTYVPSMRISARD 278 (484)
T ss_dssp T-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC--CCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred C-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC--CCCcccccCCHHHHHHHHHHCCCChhHCcCHHH
Confidence 4 7899999999999999999999999775443332222111110 111112345688999999999999999999999
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
+++
T Consensus 279 ~l~ 281 (484)
T 3nyv_A 279 ALD 281 (484)
T ss_dssp HHT
T ss_pred Hhh
Confidence 985
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.8e-28 Score=228.39 Aligned_cols=153 Identities=16% Similarity=0.209 Sum_probs=121.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC---CCCeEEeccCCCccCCCC---CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~---~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~ 74 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++. ++.+||+|||+++..... ....||+.|+|||++.
T Consensus 133 ~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~ 211 (494)
T 3lij_A 133 FNEVDAAVIIKQVLSGVTYLHKHN-IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR 211 (494)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccccccCCCcCeeCHHHHc
Confidence 467788999999999999999999 999999999999975 455999999998766543 3456899999999987
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+.++.++||||+||++|+|++|..||.......+.......... +.......++..+.+++.+||+.||.+|||+.+
T Consensus 212 -~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e 288 (494)
T 3lij_A 212 -KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYT--FDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQ 288 (494)
T ss_dssp -TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred -ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CCchhcccCCHHHHHHHHHHCCCChhhCccHHH
Confidence 57899999999999999999999999776544333222221110 111112345688999999999999999999999
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
+++
T Consensus 289 ~l~ 291 (494)
T 3lij_A 289 ALE 291 (494)
T ss_dssp HHT
T ss_pred Hhc
Confidence 985
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.8e-28 Score=215.98 Aligned_cols=154 Identities=18% Similarity=0.210 Sum_probs=114.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCC---eEEeccCCCccCCCC-----------CccccCCc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLMKNSRDG-----------KSYSTNLA 66 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~---~kl~dfg~~~~~~~~-----------~~~~~~~~ 66 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++. +||+|||++...... ....+|+.
T Consensus 108 ~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~ 186 (316)
T 2ac3_A 108 FNELEASVVVQDVASALDFLHNKG-IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAE 186 (316)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcC
Confidence 467788999999999999999999 999999999999988766 999999998754321 12348999
Q ss_pred ccCcccccC-----CCCCCCcceehHHHHHHHHhhCCCCCCcchhHH-----------HhhhhhccccccccCCCCC---
Q 019495 67 FTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----------IRDRNLQMLTDSCLEGQFT--- 127 (340)
Q Consensus 67 y~aPE~~~~-----~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~--- 127 (340)
|+|||++.+ ..++.++|||||||++|+|++|+.||....... ........+.... ..++
T Consensus 187 y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~ 264 (316)
T 2ac3_A 187 YMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGK--YEFPDKD 264 (316)
T ss_dssp GCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCC--CCCCHHH
T ss_pred ccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccC--cccCchh
Confidence 999999875 457899999999999999999999986532100 0000001111000 0111
Q ss_pred -chhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 128 -DDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 128 -~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
..++..+.+++.+||+.||++|||+.++++
T Consensus 265 ~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 265 WAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 234578999999999999999999999986
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-28 Score=216.00 Aligned_cols=153 Identities=18% Similarity=0.197 Sum_probs=118.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccC----CCCCccccCCcccCccccc--
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS----RDGKSYSTNLAFTPPEYLR-- 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~----~~~~~~~~~~~y~aPE~~~-- 74 (340)
+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++... .......+++.|+|||++.
T Consensus 114 ~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 192 (302)
T 2j7t_A 114 LTEPQIQVVCRQMLEALNFLHSKR-IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCE 192 (302)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEECCCCCEEEEECCCCccccccccccccccCChhhcCCeeeccc
Confidence 467889999999999999999999 999999999999999999999999986532 1223456899999999983
Q ss_pred ---CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 75 ---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 75 ---~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
+..++.++||||||+++|+|++|..||................. .....+..++..+.+++.+||+.||++|||
T Consensus 193 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 269 (302)
T 2j7t_A 193 TMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDP---PTLLTPSKWSVEFRDFLKIALDKNPETRPS 269 (302)
T ss_dssp HTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC---CCCSSGGGSCHHHHHHHHHHSCSCTTTSCC
T ss_pred cCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCC---cccCCccccCHHHHHHHHHHcccChhhCCC
Confidence 56788999999999999999999998875433222111111110 111223445678999999999999999999
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.++++
T Consensus 270 ~~~ll~ 275 (302)
T 2j7t_A 270 AAQLLE 275 (302)
T ss_dssp HHHHTT
T ss_pred HHHHhc
Confidence 999874
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.4e-28 Score=214.56 Aligned_cols=153 Identities=22% Similarity=0.335 Sum_probs=112.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhC-CCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCccccc--
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLR-- 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~-~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~-- 74 (340)
+++..+..++.||+.||.|||++ + ++||||||+||+++.++.+||+|||++...... ....+++.|+|||++.
T Consensus 121 ~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 199 (318)
T 2dyl_A 121 IPERILGKMTVAIVKALYYLKEKHG-VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPP 199 (318)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCGGGEEECTTSCEEECCCTTC--------------CCTTCCHHHHC--
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhCC-EEeCCCCHHHEEECCCCCEEEEECCCchhccCCccccccCCCccccChhhcccc
Confidence 46788899999999999999996 8 999999999999999999999999998765433 2346789999999995
Q ss_pred ---CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHH-HhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC
Q 019495 75 ---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150 (340)
Q Consensus 75 ---~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 150 (340)
...++.++||||||+++|+|++|+.||....... ........ ..+.. .....++..+.+++.+||+.||.+||
T Consensus 200 ~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rp 276 (318)
T 2dyl_A 200 DPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQE-EPPLL--PGHMGFSGDFQSFVKDCLTKDHRKRP 276 (318)
T ss_dssp ------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHS-CCCCC--CSSSCCCHHHHHHHHHHTCSCTTTSC
T ss_pred cccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhcc-CCCCC--CccCCCCHHHHHHHHHHccCChhHCc
Confidence 3567889999999999999999999886532211 11111111 11111 11223568899999999999999999
Q ss_pred CHHHHHH
Q 019495 151 NPKSLVT 157 (340)
Q Consensus 151 s~~~i~~ 157 (340)
++.++++
T Consensus 277 s~~~ll~ 283 (318)
T 2dyl_A 277 KYNKLLE 283 (318)
T ss_dssp CHHHHTT
T ss_pred CHHHHhh
Confidence 9999975
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.1e-28 Score=217.11 Aligned_cols=156 Identities=17% Similarity=0.185 Sum_probs=120.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHh-CCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--CccccCCcccCcccccCC-
Q 019495 1 MKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTG- 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~-~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~- 76 (340)
+++..+..++.||+.||.|||+ .+ ++||||||+||+++.++.+||+|||++...... ....+++.|+|||++.+.
T Consensus 148 ~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 226 (348)
T 2pml_X 148 IPIQVIKCIIKSVLNSFSYIHNEKN-ICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNES 226 (348)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTSC-EECCCCCGGGEEECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCC
T ss_pred CCHHHHHHHHHHHHHHHHHHhccCC-EeecCCChHhEEEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCC
Confidence 4788899999999999999999 88 999999999999999999999999998865443 345688999999999876
Q ss_pred CCCC-CcceehHHHHHHHHhhCCCCCCcchh-HHHhhhhhccccc-cccC------------CCCCchhHHHHHHHHHHh
Q 019495 77 RVTP-ESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQMLTD-SCLE------------GQFTDDDGTELVRLASRC 141 (340)
Q Consensus 77 ~~~~-~~Di~s~G~il~el~~g~~~~~~~~~-~~~~~~~~~~~~~-~~~~------------~~~~~~~~~~l~~li~~c 141 (340)
.++. ++||||||+++|+|++|..||..... ............. +... ......++..+.+++.+|
T Consensus 227 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 306 (348)
T 2pml_X 227 SYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLF 306 (348)
T ss_dssp CEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHH
T ss_pred CCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHH
Confidence 5655 89999999999999999999875433 1111111111000 0000 000134568899999999
Q ss_pred hccCCCCCCCHHHHHH
Q 019495 142 LQYEPRERPNPKSLVT 157 (340)
Q Consensus 142 l~~~p~~Rps~~~i~~ 157 (340)
|+.||.+|||+.++++
T Consensus 307 L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 307 LRKNPAERITSEDALK 322 (348)
T ss_dssp CCSSGGGSCCHHHHHT
T ss_pred ccCChhhCCCHHHHhc
Confidence 9999999999999985
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=226.39 Aligned_cols=153 Identities=14% Similarity=0.166 Sum_probs=122.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC---CeEEeccCCCccCCCC---CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG---NPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~---~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~ 74 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++.++ .+||+|||+++..... ....||+.|+|||++.
T Consensus 143 ~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~ 221 (504)
T 3q5i_A 143 FDECDAANIMKQILSGICYLHKHN-IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK 221 (504)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhc
Confidence 578889999999999999999999 99999999999998776 6999999999876544 3456899999999987
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+.++.++||||+||++|+|++|..||.......+.......... +.......++..+.+++.+||+.||.+|||+.+
T Consensus 222 -~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e 298 (504)
T 3q5i_A 222 -KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYY--FDFNDWKNISDEAKELIKLMLTYDYNKRCTAEE 298 (504)
T ss_dssp -TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC--CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred -cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC--CCccccCCCCHHHHHHHHHHcCCChhHCCCHHH
Confidence 56899999999999999999999999876544333222221100 000011234578999999999999999999999
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
++.
T Consensus 299 ~l~ 301 (504)
T 3q5i_A 299 ALN 301 (504)
T ss_dssp HHT
T ss_pred Hhc
Confidence 985
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.5e-28 Score=212.20 Aligned_cols=154 Identities=19% Similarity=0.210 Sum_probs=122.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC---ccccCCcccCccccc---
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLR--- 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~--- 74 (340)
+++.....++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++....... ...+++.|+|||++.
T Consensus 121 ~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 199 (298)
T 1phk_A 121 LSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSM 199 (298)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEcCCCcEEEecccchhhcCCCcccccccCCccccCHHHhcccc
Confidence 467889999999999999999999 9999999999999999999999999987654432 346789999999985
Q ss_pred ---CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 75 ---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 75 ---~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
...++.++||||||+++|+|++|..||................. .........++..+.+++.+||+.||.+|||
T Consensus 200 ~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 277 (298)
T 1phk_A 200 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY--QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYT 277 (298)
T ss_dssp CTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCC
T ss_pred ccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCc--ccCcccccccCHHHHHHHHHHccCCcccCCC
Confidence 34678899999999999999999999876543332222111111 0111112345688999999999999999999
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.++++
T Consensus 278 ~~~ll~ 283 (298)
T 1phk_A 278 AEEALA 283 (298)
T ss_dssp HHHHTT
T ss_pred HHHHHh
Confidence 999975
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3e-28 Score=217.32 Aligned_cols=154 Identities=18% Similarity=0.235 Sum_probs=117.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCC---eEEeccCCCccCCCCC---ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~---~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~ 74 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++. +||+|||+++...... ...+|+.|+|||++.
T Consensus 111 ~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~ 189 (322)
T 2ycf_A 111 LKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189 (322)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEecCCCCCeEEEccCccceecccccccccccCCcCccCchhhc
Confidence 467788999999999999999999 999999999999987654 9999999998765442 345799999999974
Q ss_pred ---CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHH-HhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC
Q 019495 75 ---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150 (340)
Q Consensus 75 ---~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 150 (340)
...++.++||||||+++|+|++|..||....... +......... .........++..+.+++.+||+.||++||
T Consensus 190 ~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dP~~Rp 267 (322)
T 2ycf_A 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY--NFIPEVWAEVSEKALDLVKKLLVVDPKARF 267 (322)
T ss_dssp HTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCC--CCCHHHHTTSCHHHHHHHHHHSCSSTTTSC
T ss_pred cCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCcc--ccCchhhhhcCHHHHHHHHHHcccCHhhCC
Confidence 4568899999999999999999999886532210 0000000000 000011123457899999999999999999
Q ss_pred CHHHHHH
Q 019495 151 NPKSLVT 157 (340)
Q Consensus 151 s~~~i~~ 157 (340)
++.++++
T Consensus 268 s~~~~l~ 274 (322)
T 2ycf_A 268 TTEEALR 274 (322)
T ss_dssp CHHHHHT
T ss_pred CHHHHhh
Confidence 9999985
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-27 Score=210.21 Aligned_cols=151 Identities=20% Similarity=0.328 Sum_probs=113.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------------------Ccccc
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------------------KSYST 63 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------------------~~~~~ 63 (340)
++.....++.||+.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....+
T Consensus 114 ~~~~~~~i~~qi~~~l~~LH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (303)
T 1zy4_A 114 QRDEYWRLFRQILEALSYIHSQG-IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIG 192 (303)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCCCSCTTC------------------------
T ss_pred chHHHHHHHHHHHHHHHHHHhCC-eecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCC
Confidence 56778899999999999999999 999999999999999999999999998765321 23457
Q ss_pred CCcccCcccccCC-CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhh
Q 019495 64 NLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 142 (340)
Q Consensus 64 ~~~y~aPE~~~~~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 142 (340)
++.|+|||++.+. .++.++||||||+++|+|++ |+............... ....+...++...+..+.+++.+||
T Consensus 193 ~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l 268 (303)
T 1zy4_A 193 TAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRS-VSIEFPPDFDDNKMKVEKKIIRLLI 268 (303)
T ss_dssp -CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHS-TTCCCCTTCCTTTSHHHHHHHHHHT
T ss_pred cccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhccc-cccccCccccccchHHHHHHHHHHH
Confidence 8899999999864 68999999999999999998 34322111110111111 1112233445556678999999999
Q ss_pred ccCCCCCCCHHHHHH
Q 019495 143 QYEPRERPNPKSLVT 157 (340)
Q Consensus 143 ~~~p~~Rps~~~i~~ 157 (340)
+.||.+|||+.++++
T Consensus 269 ~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 269 DHDPNKRPGARTLLN 283 (303)
T ss_dssp CSSGGGSCCHHHHHH
T ss_pred hcCcccCcCHHHHhC
Confidence 999999999999986
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-27 Score=212.60 Aligned_cols=144 Identities=22% Similarity=0.397 Sum_probs=119.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEec-CCCCeEEeccCCCccCCCC--CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~-~~~~~kl~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~ 77 (340)
+++..+..++.||+.||.|||+++ |+||||||+||+++ .++.+||+|||+++..... ....++..|+|||++.+..
T Consensus 136 ~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 214 (312)
T 2iwi_A 136 LGEGPSRCFFGQVVAAIQHCHSRG-VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQ 214 (312)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHT-EECCCCSGGGEEEETTTTEEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChhhEEEeCCCCeEEEEEcchhhhcccCcccccCCcccccCceeeecCC
Confidence 467889999999999999999999 99999999999999 8899999999998865543 3456889999999987665
Q ss_pred C-CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 78 V-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 78 ~-~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
+ +.++||||||+++|+|++|+.||..... +.. . ...++..++..+.+++.+||+.||++|||+.+++
T Consensus 215 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~----~------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l 282 (312)
T 2iwi_A 215 YHALPATVWSLGILLYDMVCGDIPFERDQE--ILE----A------ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEIL 282 (312)
T ss_dssp BCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HHH----T------CCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CCCccchHHHHHHHHHHHHHCCCCCCChHH--Hhh----h------ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 5 4589999999999999999988865321 111 0 1123445668899999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
.
T Consensus 283 ~ 283 (312)
T 2iwi_A 283 L 283 (312)
T ss_dssp H
T ss_pred c
Confidence 6
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.1e-28 Score=215.82 Aligned_cols=156 Identities=17% Similarity=0.225 Sum_probs=118.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEec-CCCCeEEeccCCCccCCCC-------CccccCCcccCccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG-------KSYSTNLAFTPPEY 72 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~-~~~~~kl~dfg~~~~~~~~-------~~~~~~~~y~aPE~ 72 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++ .++.+||+|||+++..... ....++..|+|||+
T Consensus 117 ~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 195 (320)
T 2i6l_A 117 LLEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRL 195 (320)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHH
Confidence 467788999999999999999999 99999999999997 5678999999998865422 22346889999998
Q ss_pred ccC-CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccc------------------ccc-CC-----CCC
Q 019495 73 LRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD------------------SCL-EG-----QFT 127 (340)
Q Consensus 73 ~~~-~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~------------------~~~-~~-----~~~ 127 (340)
+.+ ..++.++||||||+++|+|++|+.||.................. ... .. ...
T Consensus 196 ~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (320)
T 2i6l_A 196 LLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLL 275 (320)
T ss_dssp HHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHS
T ss_pred hcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhc
Confidence 865 56889999999999999999999998764332211111110000 000 00 012
Q ss_pred chhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 128 DDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 128 ~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
..++..+.+++.+||+.||++|||+.++++
T Consensus 276 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 276 PGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp TTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred chhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 335688999999999999999999999985
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-27 Score=221.34 Aligned_cols=149 Identities=19% Similarity=0.207 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC-----CCCeEEeccCCCccCCCC-------CccccCCcccCccc
Q 019495 5 MRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-----DGNPRLSTFGLMKNSRDG-------KSYSTNLAFTPPEY 72 (340)
Q Consensus 5 ~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~-----~~~~kl~dfg~~~~~~~~-------~~~~~~~~y~aPE~ 72 (340)
..+.++.||+.||.|||+.+ |+||||||+||+++. ...+||+|||+++..... ....||+.|+|||+
T Consensus 119 ~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~ 197 (432)
T 3p23_A 119 EPITLLQQTTSGLAHLHSLN-IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEM 197 (432)
T ss_dssp CHHHHHHHHHHHHHHHHHTT-CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGG
T ss_pred hHHHHHHHHHHHHHHHHHCc-CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhh
Confidence 46789999999999999999 999999999999953 235789999998765432 23468999999999
Q ss_pred ccC---CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCC
Q 019495 73 LRT---GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 148 (340)
Q Consensus 73 ~~~---~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~ 148 (340)
+.+ ..++.++|||||||++|||++ |..||.......... ........ ........+..+.++|.+||+.||.+
T Consensus 198 l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~ 274 (432)
T 3p23_A 198 LSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI-LLGACSLD--CLHPEKHEDVIARELIEKMIAMDPQK 274 (432)
T ss_dssp TSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHH-HTTCCCCT--TSCTTCHHHHHHHHHHHHHSCSSGGG
T ss_pred hhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHH-HhccCCcc--ccCccccccHHHHHHHHHHHhCCHhh
Confidence 973 457889999999999999999 777764432222111 11111111 11123345677899999999999999
Q ss_pred CCCHHHHHH
Q 019495 149 RPNPKSLVT 157 (340)
Q Consensus 149 Rps~~~i~~ 157 (340)
|||+.+|++
T Consensus 275 Rps~~evl~ 283 (432)
T 3p23_A 275 RPSAKHVLK 283 (432)
T ss_dssp SCCHHHHHT
T ss_pred CCCHHHHHh
Confidence 999999984
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-27 Score=207.67 Aligned_cols=153 Identities=17% Similarity=0.178 Sum_probs=119.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCC---CCeEEeccCCCccCCCCC---ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~---~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~ 74 (340)
+++..+..++.||+.||.|||+++ ++||||||+||+++.+ +.+||+|||++....... ...+++.|+|||++.
T Consensus 118 ~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~ 196 (287)
T 2wei_A 118 FSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR 196 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChhhEEEecCCCcccEEEeccCcceeecCCCccccccCcccccChHHhc
Confidence 467889999999999999999999 9999999999999754 469999999987654432 335788999999987
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+ .++.++||||||+++|+|++|..||.......+.......... ........++..+.+++.+||+.||++|||+.+
T Consensus 197 ~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e 273 (287)
T 2wei_A 197 G-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYA--FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQ 273 (287)
T ss_dssp T-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC--CCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred C-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC--CCchhhhhcCHHHHHHHHHHcccChhhCcCHHH
Confidence 4 5889999999999999999999998765433322221111100 000111235678999999999999999999999
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
+++
T Consensus 274 ll~ 276 (287)
T 2wei_A 274 CLE 276 (287)
T ss_dssp HHH
T ss_pred Hhc
Confidence 986
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-26 Score=222.37 Aligned_cols=154 Identities=18% Similarity=0.215 Sum_probs=116.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCC---eEEeccCCCccCCCC---CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~---~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~ 74 (340)
+++..+..++.||+.||.|||+.+ |+||||||+||+++.++. +||+|||++...... ....+|+.|+|||++.
T Consensus 118 lse~~i~~I~~QLl~aL~yLHs~g-IVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~ 196 (676)
T 3qa8_A 118 LKEGPIRTLLSDISSALRYLHENR-IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLE 196 (676)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHTT-BCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEeecCCCceeEEEcccccccccccccccccccCCcccCChHHhc
Confidence 456778899999999999999999 999999999999987765 899999999876543 2356899999999999
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhh----------hhcc-cc-------ccccCCCCCchhHHHHHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR----------NLQM-LT-------DSCLEGQFTDDDGTELVR 136 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~----------~~~~-~~-------~~~~~~~~~~~~~~~l~~ 136 (340)
+..++.++||||||+++|+|++|..||........-.. .... .. ........+...+..+.+
T Consensus 197 ~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~d 276 (676)
T 3qa8_A 197 QKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLER 276 (676)
T ss_dssp CSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHH
T ss_pred cCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHH
Confidence 88999999999999999999999999865311110000 0000 00 000112234457899999
Q ss_pred HHHHhhccCCCCCCCHHHH
Q 019495 137 LASRCLQYEPRERPNPKSL 155 (340)
Q Consensus 137 li~~cl~~~p~~Rps~~~i 155 (340)
++.+||..||++|||+.++
T Consensus 277 LI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 277 WLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp HHHHHSCSSCC---CCTTC
T ss_pred HHHHHccCCHhhCcCHHHH
Confidence 9999999999999999663
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=8.7e-26 Score=199.29 Aligned_cols=136 Identities=17% Similarity=0.217 Sum_probs=104.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC---CCCeEEeccCCCccCCCCCccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++. ++.+||+|||++.... +..
T Consensus 114 ~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~------------------~~~ 174 (299)
T 3m2w_A 114 FTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT------------------GEK 174 (299)
T ss_dssp CBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECT------------------TCG
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEecCCCCCcEEEeccccccccc------------------ccc
Confidence 467889999999999999999999 999999999999987 7889999999876432 245
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCC----chhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT----DDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
++.++|||||||++|+|++|+.||.................... ..++ ..++..+.+++.+||+.||.+|||+.
T Consensus 175 ~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~ 252 (299)
T 3m2w_A 175 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ--YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT 252 (299)
T ss_dssp GGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTC--CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred CCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhcc--ccCCchhcccCCHHHHHHHHHHcccChhhCCCHH
Confidence 67899999999999999999999865433222111111111111 1112 33568899999999999999999999
Q ss_pred HHHH
Q 019495 154 SLVT 157 (340)
Q Consensus 154 ~i~~ 157 (340)
++++
T Consensus 253 e~l~ 256 (299)
T 3m2w_A 253 EFMN 256 (299)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9985
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.90 E-value=4.8e-25 Score=197.72 Aligned_cols=148 Identities=12% Similarity=0.065 Sum_probs=111.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHH-hCCCccccCCCCCCEEecCCC--------------------CeEEeccCCCccCCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCT-SKGRALYHDLNAYRILFDEDG--------------------NPRLSTFGLMKNSRDGK 59 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH-~~~~iiH~dlk~~nill~~~~--------------------~~kl~dfg~~~~~~~~~ 59 (340)
+++.....++.||+.||.||| +.+ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 158 ~~~~~~~~i~~qi~~aL~~lH~~~~-ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~- 235 (336)
T 2vuw_A 158 SSLATAKSILHQLTASLAVAEASLR-FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG- 235 (336)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHC-CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCC-EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-
Confidence 467889999999999999999 899 99999999999999887 8999999999876543
Q ss_pred ccccCCcccCcccccCCCCCCCcceehHHHH-HHHHhhCCCCCCcchhHH-Hhhhhhcc-ccccccCCCCCchhHHHHHH
Q 019495 60 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTL-LLDLLSGKHIPPSHALDL-IRDRNLQM-LTDSCLEGQFTDDDGTELVR 136 (340)
Q Consensus 60 ~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~i-l~el~~g~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~l~~ 136 (340)
...||+.|+|||++.+.. +.++||||+|++ .+++++|..||....+.. ........ ..........+..+++.+.+
T Consensus 236 ~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~d 314 (336)
T 2vuw_A 236 IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQE 314 (336)
T ss_dssp EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHH
T ss_pred cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHH
Confidence 457899999999998655 889999998777 777888988775422111 11111111 01111111123457889999
Q ss_pred HHHHhhccCCCCCCCHHHHH
Q 019495 137 LASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 137 li~~cl~~~p~~Rps~~~i~ 156 (340)
||.+||+.| |+.+++
T Consensus 315 li~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 315 FHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHGGGSS-----SHHHHH
T ss_pred HHHHHhccC-----CHHHHH
Confidence 999999977 888887
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-24 Score=190.00 Aligned_cols=139 Identities=17% Similarity=0.139 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCccccCCcccCcccccCCCCCCCc
Q 019495 3 WAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPES 82 (340)
Q Consensus 3 ~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 82 (340)
..+.++|+.||+.||.|||+++ |+||||||+||+++.+|.+||+++| |++ .++.++
T Consensus 128 ~~~~~~i~~ql~~aL~~lH~~g-ivH~Dikp~NIll~~~g~~kl~~~~----------------~~~-------~~~~~~ 183 (286)
T 3uqc_A 128 PVGAIRAMQSLAAAADAAHRAG-VALSIDHPSRVRVSIDGDVVLAYPA----------------TMP-------DANPQD 183 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEETTSCEEECSCC----------------CCT-------TCCHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHCC-CccCCCCcccEEEcCCCCEEEEecc----------------ccC-------CCCchh
Confidence 3467889999999999999999 9999999999999999999998544 333 367899
Q ss_pred ceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccc-ccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHHHhcc
Q 019495 83 VIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS-CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 161 (340)
Q Consensus 83 Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~ 161 (340)
|||||||++|+|+||+.||................... .........++..+.+++.+||+.||++| |+.++++.|..
T Consensus 184 Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~ 262 (286)
T 3uqc_A 184 DIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQ 262 (286)
T ss_dssp HHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHH
Confidence 99999999999999999987643211000000000000 00001223456889999999999999999 99999999988
Q ss_pred cccCC
Q 019495 162 LQKET 166 (340)
Q Consensus 162 ~~~~~ 166 (340)
.....
T Consensus 263 ~~~~~ 267 (286)
T 3uqc_A 263 ATAVA 267 (286)
T ss_dssp HHC--
T ss_pred HhccC
Confidence 76543
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-21 Score=149.64 Aligned_cols=108 Identities=20% Similarity=0.263 Sum_probs=103.8
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
..++.+.++|+.+++.|+|++|++.|+++|+++|+ ++.+|.++|.+|..+|++++|+++|++|++++|+++.+|+++|.
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~ 89 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAA 89 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHH
Confidence 45677889999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 309 ALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 309 ~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
+|..+|++++|+.+|+++++++|++..++
T Consensus 90 ~~~~~~~~~~A~~~~~~al~l~P~~~~a~ 118 (126)
T 4gco_A 90 CLVAMREWSKAQRAYEDALQVDPSNEEAR 118 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHCcCCHHHH
Confidence 99999999999999999999999998765
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.84 E-value=9.2e-21 Score=148.48 Aligned_cols=112 Identities=13% Similarity=0.041 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCc-----------chHHhhhhHHHHHhcCChHHHHHHHHHHhhh-
Q 019495 228 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----------SPTVYARRSLCYLMSDMPQDALNDAMQAQII- 295 (340)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-----------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~- 295 (340)
...+..++..|+.+++.|+|++|+..|++||+++|++ +..+|.++|.++.++|+|++|+.+|++||++
T Consensus 8 ~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~ 87 (159)
T 2hr2_A 8 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYF 87 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhh
Confidence 4567889999999999999999999999999999982 1238999999999999999999999999999
Q ss_pred ------CCCchHHH----HHHHHHHHHcCChHHHHHHHHhhhccccccccccCC
Q 019495 296 ------SPIWHIAS----YLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQ 339 (340)
Q Consensus 296 ------~p~~~~a~----~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~~ 339 (340)
+|++.++| |++|.+|..+|++++|+.+|++|++++|++....++
T Consensus 88 n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~ 141 (159)
T 2hr2_A 88 NRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPG 141 (159)
T ss_dssp HHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTT
T ss_pred hccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 99999999 999999999999999999999999999999866543
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.1e-21 Score=185.33 Aligned_cols=89 Identities=13% Similarity=0.157 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCCCCCCCcc
Q 019495 8 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTGRVTPESV 83 (340)
Q Consensus 8 ~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~D 83 (340)
+|+.||+.||.|+|++| ||||||||+|||++.+|.+||+|||+++...... +.+||+.|||||++.+ .+..++|
T Consensus 343 ~I~~QIl~AL~ylH~~G-IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d 420 (569)
T 4azs_A 343 KILGSLLRSLAALEKQG-FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAE-NKSWNGF 420 (569)
T ss_dssp HHHHHHHHHHHHHHHTT-CEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC----------
T ss_pred HHHHHHHHHHHHHHHCC-ceeccCchHhEEECCCCCEEEeecccCeeCCCCCccccCceechhhccHHHhCC-CCCCccc
Confidence 58999999999999999 9999999999999999999999999998665432 3468999999999984 5667899
Q ss_pred eehHHHHHHHHhhCC
Q 019495 84 IYSFGTLLLDLLSGK 98 (340)
Q Consensus 84 i~s~G~il~el~~g~ 98 (340)
+||+|++++++.++.
T Consensus 421 ~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 421 WRSAPVHPFNLPQPW 435 (569)
T ss_dssp --------CCCCTTH
T ss_pred ccccccchhhhcccc
Confidence 999999988776553
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.79 E-value=8.9e-19 Score=138.15 Aligned_cols=108 Identities=6% Similarity=-0.103 Sum_probs=103.1
Q ss_pred hHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHH
Q 019495 226 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 305 (340)
Q Consensus 226 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 305 (340)
-...+...++..|..++..|+|++|+..|+++++++|+ ++.+|.++|.+|..+|+|++|+..|++|++++|+++.+|++
T Consensus 31 l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~ 109 (151)
T 3gyz_A 31 IPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFH 109 (151)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHH
Confidence 34567778999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHhhhccccccc
Q 019495 306 QAAALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 306 ~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
+|.+|..+|++++|+.+|+++++++|+..
T Consensus 110 lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 110 TGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999999999864
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.78 E-value=9.2e-19 Score=139.70 Aligned_cols=108 Identities=24% Similarity=0.234 Sum_probs=102.2
Q ss_pred hHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhc------------------CCCcchHHhhhhHHHHHhcCChHHHHH
Q 019495 226 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA------------------GTMVSPTVYARRSLCYLMSDMPQDALN 287 (340)
Q Consensus 226 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------------------~p~~~~~~~~~~~~~~~~~~~~~~A~~ 287 (340)
+++..+..+...|+.++..|+|++|+..|+++|++ +|. ...+|.++|.||.++|++++|+.
T Consensus 6 e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~A~~ 84 (162)
T 3rkv_A 6 DKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRK-NIPLYANMSQCYLNIGDLHEAEE 84 (162)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHT-HHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH-HHHHHHHHHHHHHhcCcHHHHHH
Confidence 55678889999999999999999999999999999 677 67899999999999999999999
Q ss_pred HHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhccccccc
Q 019495 288 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 288 ~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
++++|++++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++.
T Consensus 85 ~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 131 (162)
T 3rkv_A 85 TSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAA 131 (162)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCH
Confidence 99999999999999999999999999999999999999999999987
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.7e-18 Score=131.42 Aligned_cols=104 Identities=15% Similarity=0.134 Sum_probs=97.2
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCch-------H
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH-------I 301 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~-------~ 301 (340)
+.+..+.+.|+.+++.|+|++|++.|++||+++|+ +..+|.++|.+|..+|+|++|++++++|++++|++. .
T Consensus 6 d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~-~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~ 84 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAK 84 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHH
Confidence 45667889999999999999999999999999999 899999999999999999999999999999998763 5
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHhhhcccccc
Q 019495 302 ASYLQAAALSAMGMENEAQVALKEGTTLEAKK 333 (340)
Q Consensus 302 a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 333 (340)
+|+++|.++..+|++++|+++|+++++++|+.
T Consensus 85 ~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~~ 116 (127)
T 4gcn_A 85 AMSRAGNAFQKQNDLSLAVQWFHRSLSEFRDP 116 (127)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSCCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCH
Confidence 89999999999999999999999999988863
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.2e-18 Score=130.45 Aligned_cols=106 Identities=19% Similarity=0.194 Sum_probs=100.8
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 309 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 309 (340)
.+..+...|..++..|+|++|+..|+++++++|+ +..++.++|.+|..+|++++|+.+++++++++|+++.+|+++|.+
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATA 81 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 4678899999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHhhhccc------cccccc
Q 019495 310 LSAMGMENEAQVALKEGTTLE------AKKNST 336 (340)
Q Consensus 310 ~~~~~~~~~A~~~~~~al~l~------p~~~~~ 336 (340)
+..+|++++|+..|+++++++ |++..+
T Consensus 82 ~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~ 114 (126)
T 3upv_A 82 QIAVKEYASALETLDAARTKDAEVNNGSSAREI 114 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHH
T ss_pred HHHHhCHHHHHHHHHHHHHhCcccCCchhHHHH
Confidence 999999999999999999999 666543
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.1e-17 Score=133.56 Aligned_cols=109 Identities=26% Similarity=0.296 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHH
Q 019495 228 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 307 (340)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 307 (340)
...+..+...|..++..|+|++|++.|+++++++|+ +..++.++|.+|...|++++|+.+|+++++++|+++.+|+++|
T Consensus 8 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 86 (164)
T 3sz7_A 8 TPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLG 86 (164)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 356778899999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 308 AALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 308 ~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
.+|..+|++++|+.+|+++++++|++..++
T Consensus 87 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 116 (164)
T 3sz7_A 87 LARFDMADYKGAKEAYEKGIEAEGNGGSDA 116 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHSSSCCHH
T ss_pred HHHHHccCHHHHHHHHHHHHHhCCCchHHH
Confidence 999999999999999999999999988743
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=8e-18 Score=132.67 Aligned_cols=110 Identities=11% Similarity=0.083 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHH
Q 019495 227 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 306 (340)
Q Consensus 227 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 306 (340)
.......++..|..++..|+|++|++.|+++|+++|+ ++.+|.++|.+|...|++++|+..|+++++++|+++.+|+++
T Consensus 27 ~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 105 (150)
T 4ga2_A 27 PRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQER-DPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKI 105 (150)
T ss_dssp HHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3455667789999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHH-HHhhhcccccccccc
Q 019495 307 AAALSAMGMENEAQVA-LKEGTTLEAKKNSTA 337 (340)
Q Consensus 307 g~~~~~~~~~~~A~~~-~~~al~l~p~~~~~~ 337 (340)
|.+|..+|++++|... +++|++++|+++.++
T Consensus 106 a~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~ 137 (150)
T 4ga2_A 106 AELLCKNDVTDGRAKYWVERAAKLFPGSPAVY 137 (150)
T ss_dssp HHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHcCChHHHHHHHHHHHHHhCcCCHHHH
Confidence 9999999999988776 599999999988664
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2.7e-17 Score=129.32 Aligned_cols=108 Identities=11% Similarity=0.017 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHH
Q 019495 228 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 307 (340)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 307 (340)
..+...+...|..++..|+|++|+..|+++++.+|+ ++.+|.++|.+|...|++++|++.|+++++++|+++.+++++|
T Consensus 18 p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg 96 (148)
T 2vgx_A 18 SDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAA 96 (148)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 345667889999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHhhhccccccccc
Q 019495 308 AALSAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 308 ~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
.+|..+|++++|+.+|+++++++|+++..
T Consensus 97 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 125 (148)
T 2vgx_A 97 ECLLQXGELAEAESGLFLAQELIANXPEF 125 (148)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHTTCGGG
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCcCCCcc
Confidence 99999999999999999999999987643
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.73 E-value=4.1e-17 Score=127.18 Aligned_cols=108 Identities=10% Similarity=0.061 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHH
Q 019495 228 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 307 (340)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 307 (340)
..+...++..|..++..|+|++|+..|+++++.+|+ ++.+|..+|.+|...|++++|+..|+++++++|+++.+++.+|
T Consensus 15 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 93 (142)
T 2xcb_A 15 EDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAA 93 (142)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHH
Confidence 345667889999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHhhhccccccccc
Q 019495 308 AALSAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 308 ~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
.+|..+|++++|+.+|+++++++|+++..
T Consensus 94 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 122 (142)
T 2xcb_A 94 ECHLQLGDLDGAESGFYSARALAAAQPAH 122 (142)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHTCGGG
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCcch
Confidence 99999999999999999999999987653
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.72 E-value=3.3e-17 Score=124.26 Aligned_cols=103 Identities=12% Similarity=0.056 Sum_probs=93.1
Q ss_pred HHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHH
Q 019495 232 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 311 (340)
Q Consensus 232 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 311 (340)
..++..|..++..|++++|+..|+++++.+|+ +..++..+|.++...|++++|+..++++++++|++..+++.+|.+|.
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~ 96 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHT 96 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 35678899999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHhhhcccccccc
Q 019495 312 AMGMENEAQVALKEGTTLEAKKNS 335 (340)
Q Consensus 312 ~~~~~~~A~~~~~~al~l~p~~~~ 335 (340)
.+|++++|+..|+++++++|++..
T Consensus 97 ~~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 97 NEHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHHHC-------
T ss_pred HcCCHHHHHHHHHHHHHhCcCCCC
Confidence 999999999999999999998754
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.68 E-value=1e-16 Score=133.41 Aligned_cols=106 Identities=16% Similarity=0.019 Sum_probs=100.3
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhh----------------hHHHHHhcCChHHHHHHHHHHhh
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYAR----------------RSLCYLMSDMPQDALNDAMQAQI 294 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~----------------~~~~~~~~~~~~~A~~~~~~al~ 294 (340)
+..++.+|..++..|+|++|+..|+++++.+|+ ++.+++. +|.+|...|++++|+..|+++++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 82 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNID-RTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQ 82 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH-HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 457788999999999999999999999999999 8888888 99999999999999999999999
Q ss_pred hCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 295 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 295 ~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
++|+++.+++.+|.++..+|++++|+.+|+++++++|++..++
T Consensus 83 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~ 125 (208)
T 3urz_A 83 KAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAAN 125 (208)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Confidence 9999999999999999999999999999999999999987664
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=99.67 E-value=8.4e-16 Score=118.28 Aligned_cols=102 Identities=24% Similarity=0.380 Sum_probs=98.7
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
+..+...|..++..|+|++|+..|+++++.+|+ +..++.++|.++...|++++|+..++++++++|+++.+++.+|.++
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 87 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 87 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHH
Confidence 567889999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHhhhcccccc
Q 019495 311 SAMGMENEAQVALKEGTTLEAKK 333 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~~ 333 (340)
..+|++++|+..|+++++++|++
T Consensus 88 ~~~~~~~~A~~~~~~a~~~~p~~ 110 (137)
T 3q49_B 88 LEMESYDEAIANLQRAYSLAKEQ 110 (137)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHhhHHHHHHHHHHHHHHChhH
Confidence 99999999999999999999984
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.66 E-value=8e-16 Score=126.69 Aligned_cols=112 Identities=19% Similarity=0.243 Sum_probs=105.1
Q ss_pred hhHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcch----------------HHhhhhHHHHHhcCChHHHHHH
Q 019495 225 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP----------------TVYARRSLCYLMSDMPQDALND 288 (340)
Q Consensus 225 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~----------------~~~~~~~~~~~~~~~~~~A~~~ 288 (340)
..+...+..+...|..++..|+|++|+..|++++++.|. ++ .++.++|.+|..+|++++|+.+
T Consensus 32 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~ 110 (198)
T 2fbn_A 32 EEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH-TEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDH 110 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT-CTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 356677889999999999999999999999999999998 55 7899999999999999999999
Q ss_pred HHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 289 AMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 289 ~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
++++++++|++..+++++|.+|..+|++++|+.+|+++++++|++..++
T Consensus 111 ~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 159 (198)
T 2fbn_A 111 ASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIR 159 (198)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHH
Confidence 9999999999999999999999999999999999999999999987554
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.66 E-value=9.7e-16 Score=114.07 Aligned_cols=107 Identities=26% Similarity=0.368 Sum_probs=101.7
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 309 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 309 (340)
.+..+...|..++..|+|++|+..|+++++.+|+ +..++..+|.++...|++++|+..++++++++|++..+++.+|.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 81 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 81 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 4567889999999999999999999999999999 889999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHhhhcccccccccc
Q 019495 310 LSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 310 ~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
+..+|++++|+..|+++++++|++..++
T Consensus 82 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 109 (118)
T 1elw_A 82 LEFLNRFEEAKRTYEEGLKHEANNPQLK 109 (118)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHcCCCCHHHH
Confidence 9999999999999999999999987654
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=7.9e-17 Score=126.92 Aligned_cols=100 Identities=8% Similarity=-0.076 Sum_probs=92.5
Q ss_pred HHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCCh
Q 019495 237 KGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGME 316 (340)
Q Consensus 237 ~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~ 316 (340)
.|..+..+|++++|++.|++++..+|+ ++..++.+|.+|...|+|++|++.|+++++++|+++.+|+.+|.+|..+|++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~-~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQ-KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHH-HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 467778899999999999999999999 8899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcccccccccc
Q 019495 317 NEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 317 ~~A~~~~~~al~l~p~~~~~~ 337 (340)
++|+.+|+++++++|++..++
T Consensus 82 ~~A~~~~~~al~~~p~~~~~~ 102 (150)
T 4ga2_A 82 DKAVECYRRSVELNPTQKDLV 102 (150)
T ss_dssp HHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999987654
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.65 E-value=6.5e-17 Score=126.37 Aligned_cols=95 Identities=12% Similarity=0.028 Sum_probs=88.1
Q ss_pred hhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCCh----------HHHHHHHHHHhhhCCCchHHHHHHHHHHH
Q 019495 242 FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMP----------QDALNDAMQAQIISPIWHIASYLQAAALS 311 (340)
Q Consensus 242 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~----------~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 311 (340)
-+.+.|++|++.|+++++++|+ ++..|.++|.++...+++ ++|+..|++||+++|++..+|+++|.+|.
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~-~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~ 91 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYT 91 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH
Confidence 3567899999999999999999 899999999999998875 59999999999999999999999999999
Q ss_pred HcC-----------ChHHHHHHHHhhhcccccccccc
Q 019495 312 AMG-----------MENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 312 ~~~-----------~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
.+| ++++|+.+|++|++++|++...+
T Consensus 92 ~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~ 128 (158)
T 1zu2_A 92 SFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYL 128 (158)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHH
Confidence 885 89999999999999999987554
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.64 E-value=1.1e-15 Score=136.79 Aligned_cols=111 Identities=14% Similarity=0.134 Sum_probs=104.7
Q ss_pred hHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcc---------------hHHhhhhHHHHHhcCChHHHHHHHH
Q 019495 226 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---------------PTVYARRSLCYLMSDMPQDALNDAM 290 (340)
Q Consensus 226 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~ 290 (340)
.....+..+...|+.++..|+|++|+..|+++++++|+ + ..++.++|.||.++|++++|+..|+
T Consensus 142 ~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~ 220 (336)
T 1p5q_A 142 EKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEY-ESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCN 220 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc-cccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 35567788999999999999999999999999999999 5 5899999999999999999999999
Q ss_pred HHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 291 QAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 291 ~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
+|++++|+++.+|+++|.+|..+|++++|+.+|++|++++|++..++
T Consensus 221 ~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~ 267 (336)
T 1p5q_A 221 KALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAK 267 (336)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHH
T ss_pred HHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH
Confidence 99999999999999999999999999999999999999999987654
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.64 E-value=9.6e-16 Score=142.86 Aligned_cols=111 Identities=15% Similarity=0.192 Sum_probs=101.4
Q ss_pred hHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcc---------------hHHhhhhHHHHHhcCChHHHHHHHH
Q 019495 226 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---------------PTVYARRSLCYLMSDMPQDALNDAM 290 (340)
Q Consensus 226 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~ 290 (340)
.....+..+..+|+.++..|+|++|+..|++|++++|. + ..+|.++|.||.++|+|++|+.+|+
T Consensus 263 ~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~ 341 (457)
T 1kt0_A 263 EKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCD 341 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 45567789999999999999999999999999999999 5 6899999999999999999999999
Q ss_pred HHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 291 QAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 291 ~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
+|++++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..++
T Consensus 342 ~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~ 388 (457)
T 1kt0_A 342 KALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAAR 388 (457)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHH
T ss_pred HHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999999999999999999999988664
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=7.1e-16 Score=150.71 Aligned_cols=108 Identities=18% Similarity=0.097 Sum_probs=97.7
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
+....+.+.|..+.+.|++++|++.|++||+++|+ +..+|+++|.+|..+|++++|++.|++|++++|++..+|+++|.
T Consensus 41 ~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~-~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~ 119 (723)
T 4gyw_A 41 EFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT-FADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLAS 119 (723)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 34567888999999999999999999999999999 88999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 309 ALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 309 ~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
+|..+|++++|+++|++|++++|++..++
T Consensus 120 ~~~~~g~~~eAi~~~~~Al~l~P~~~~a~ 148 (723)
T 4gyw_A 120 IHKDSGNIPEAIASYRTALKLKPDFPDAY 148 (723)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCSCCHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCChHHH
Confidence 99999999999999999999999887654
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.6e-15 Score=115.59 Aligned_cols=107 Identities=26% Similarity=0.317 Sum_probs=101.0
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 309 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 309 (340)
....+...|..++..|+|++|+..|+++++.+|+ +..++..+|.+|...|++++|+..++++++++|++..+++.+|.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 93 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAA 93 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT-CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHH
Confidence 3556788899999999999999999999999999 889999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHhhhcccccccccc
Q 019495 310 LSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 310 ~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
+..+|++++|+..|+++++++|++..++
T Consensus 94 ~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 121 (133)
T 2lni_A 94 LEAMKDYTKAMDVYQKALDLDSSCKEAA 121 (133)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCGGGTHHH
T ss_pred HHHHhhHHHHHHHHHHHHHhCCCchHHH
Confidence 9999999999999999999999987654
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.63 E-value=8.7e-16 Score=137.49 Aligned_cols=113 Identities=12% Similarity=0.143 Sum_probs=98.2
Q ss_pred hhHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcch-----------------HHhhhhHHHHHhcCChHHHHH
Q 019495 225 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP-----------------TVYARRSLCYLMSDMPQDALN 287 (340)
Q Consensus 225 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~-----------------~~~~~~~~~~~~~~~~~~A~~ 287 (340)
.++...+..++..|+.++..|+|++|+..|++++++.|+ +. .+|.++|.||.++|+|++|+.
T Consensus 173 ~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~ 251 (338)
T 2if4_A 173 EERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGD-DFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIG 251 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCH-HHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc-chhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 466778889999999999999999999999999999998 55 388999999999999999999
Q ss_pred HHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhccccccccccC
Q 019495 288 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 338 (340)
Q Consensus 288 ~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 338 (340)
+|+++++++|++..+|+++|.+|..+|+|++|+.+|+++++++|++..++.
T Consensus 252 ~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~ 302 (338)
T 2if4_A 252 HCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRR 302 (338)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC----------
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHH
Confidence 999999999999999999999999999999999999999999999887764
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.8e-15 Score=116.54 Aligned_cols=106 Identities=23% Similarity=0.239 Sum_probs=100.0
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcc---hHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 307 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 307 (340)
+..+...|..++..|+|++|++.|+++++.+|+ + ..++.++|.+|...|++++|+..++++++++|++..+++.+|
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a 106 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDAT-PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRS 106 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccc-chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHH
Confidence 456788899999999999999999999999998 6 788999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 308 AALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 308 ~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
.++..+|++++|+..|+++++++|++..++
T Consensus 107 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 136 (148)
T 2dba_A 107 QALEKLGRLDQAVLDLQRCVSLEPKNKVFQ 136 (148)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCSSCHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCcHHHH
Confidence 999999999999999999999999987654
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.62 E-value=3.9e-15 Score=118.11 Aligned_cols=111 Identities=23% Similarity=0.304 Sum_probs=104.5
Q ss_pred hHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHH
Q 019495 226 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 305 (340)
Q Consensus 226 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 305 (340)
+....+..+...|..++..|+|++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|++..+++.
T Consensus 8 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 86 (166)
T 1a17_A 8 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYR 86 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHH
Confidence 34567788999999999999999999999999999999 88999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 306 QAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 306 ~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
+|.++..+|++++|+.+|+++++++|++..++
T Consensus 87 ~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 118 (166)
T 1a17_A 87 RAASNMALGKFRAALRDYETVVKVKPHDKDAK 118 (166)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999999876543
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.62 E-value=1.4e-15 Score=137.72 Aligned_cols=113 Identities=18% Similarity=0.217 Sum_probs=105.3
Q ss_pred hhhHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHh----------------cCCCcchHHhhhhHHHHHhcCChHHHHH
Q 019495 224 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFID----------------AGTMVSPTVYARRSLCYLMSDMPQDALN 287 (340)
Q Consensus 224 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~----------------~~p~~~~~~~~~~~~~~~~~~~~~~A~~ 287 (340)
.......+..+...|+.++..|+|++|++.|+++++ ++|. ...+|.++|.+|.++|++++|++
T Consensus 216 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~g~~~~A~~ 294 (370)
T 1ihg_A 216 VDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVD 294 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHH-HHHHHHHHHHHHHhccCHHHHHH
Confidence 345667778899999999999999999999999998 7777 78999999999999999999999
Q ss_pred HHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 288 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 288 ~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
++++|++++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..++
T Consensus 295 ~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~ 344 (370)
T 1ihg_A 295 SCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQ 344 (370)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999999999999999999999999987554
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=99.62 E-value=3.2e-15 Score=130.32 Aligned_cols=105 Identities=23% Similarity=0.365 Sum_probs=100.4
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
+..+...|+.++..|+|++|+..|+++++.+|+ +..++.++|.+|..+|++++|+.++++|++++|++..+++++|.+|
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 82 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 82 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 456788999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHhhhccccccccc
Q 019495 311 SAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
..+|++++|+..|+++++++|++...
T Consensus 83 ~~~g~~~~A~~~~~~al~l~p~~~~~ 108 (281)
T 2c2l_A 83 LEMESYDEAIANLQRAYSLAKEQRLN 108 (281)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHcCCHHHHHHHHHHHHHhCccchhh
Confidence 99999999999999999999987543
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.3e-15 Score=127.45 Aligned_cols=106 Identities=13% Similarity=0.146 Sum_probs=101.0
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
...+...|..++..|++++|+..|+++++.+|+ ++.++.++|.++...|++++|+..++++++++|+++.+++.+|.++
T Consensus 5 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~ 83 (217)
T 2pl2_A 5 EQNPLRLGVQLYALGRYDAALTLFERALKENPQ-DPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAY 83 (217)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 346788999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHc-----------CChHHHHHHHHhhhcccccccccc
Q 019495 311 SAM-----------GMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 311 ~~~-----------~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
..+ |++++|+..|+++++++|++..++
T Consensus 84 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~ 121 (217)
T 2pl2_A 84 VALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLH 121 (217)
T ss_dssp HHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHH
Confidence 999 999999999999999999987654
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=99.61 E-value=3.5e-15 Score=113.49 Aligned_cols=103 Identities=14% Similarity=0.021 Sum_probs=96.9
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcch---HHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCc---hHHHHHH
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP---TVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---HIASYLQ 306 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---~~a~~~~ 306 (340)
.++..|..++..|+|++|++.|+++++.+|+ +. .++..+|.+|...|++++|+..++++++.+|++ +.+++.+
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l 82 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPN-GVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKL 82 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHH
Confidence 4678899999999999999999999999999 66 688889999999999999999999999999999 8999999
Q ss_pred HHHHHHcCChHHHHHHHHhhhccccccccc
Q 019495 307 AAALSAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 307 g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
|.++..+|++++|+..|+++++.+|++..+
T Consensus 83 a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~ 112 (129)
T 2xev_A 83 GLSQYGEGKNTEAQQTLQQVATQYPGSDAA 112 (129)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTSHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCCCChHH
Confidence 999999999999999999999999987654
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.61 E-value=5.6e-15 Score=119.81 Aligned_cols=105 Identities=20% Similarity=0.167 Sum_probs=98.9
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
...+...|..+...++++.|++.+.++++++|+ +..++..+|.+|..+|++++|++.|+++++++|+++.+|+++|.+|
T Consensus 73 ~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~ 151 (184)
T 3vtx_A 73 AEAYYILGSANFMIDEKQAAIDALQRAIALNTV-YADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAY 151 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHH
Confidence 345677788999999999999999999999999 8899999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHhhhccccccccc
Q 019495 311 SAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
..+|++++|+.+|++|++++|++...
T Consensus 152 ~~~g~~~~A~~~~~~al~~~p~~a~~ 177 (184)
T 3vtx_A 152 EGKGLRDEAVKYFKKALEKEEKKAKY 177 (184)
T ss_dssp HHTTCHHHHHHHHHHHHHTTHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHhCCccCHHH
Confidence 99999999999999999999997643
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.61 E-value=8.7e-15 Score=110.82 Aligned_cols=110 Identities=19% Similarity=0.251 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHH
Q 019495 227 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 306 (340)
Q Consensus 227 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 306 (340)
.......+...|..++..|+|++|+..|+++++.+|+ +..++..+|.++...|++++|+..++++++++|++..+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 86 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPA-NAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRM 86 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHH
Confidence 3456678899999999999999999999999999999 889999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 307 AAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 307 g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
|.++..+|++++|+..|+++++++|++..++
T Consensus 87 ~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 117 (131)
T 2vyi_A 87 GLALSSLNKHVEAVAYYKKALELDPDNETYK 117 (131)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHhcCccchHHH
Confidence 9999999999999999999999999876543
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=3.1e-15 Score=146.22 Aligned_cols=103 Identities=16% Similarity=0.093 Sum_probs=70.8
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 309 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 309 (340)
.+..+...|+.+...|++++|++.|++||+++|+ +..++.++|.+|..+|++++|++.|++|++++|+++.+|+++|.+
T Consensus 76 ~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~-~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~ 154 (723)
T 4gyw_A 76 FADAYSNMGNTLKEMQDVQGALQCYTRAIQINPA-FADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHC 154 (723)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhH
Confidence 3445666666777777777777777777777776 666666667777777777777777777777777777777777777
Q ss_pred HHHcCChHHHHHHHHhhhcccccc
Q 019495 310 LSAMGMENEAQVALKEGTTLEAKK 333 (340)
Q Consensus 310 ~~~~~~~~~A~~~~~~al~l~p~~ 333 (340)
|..+|++++|++.|++++++.|+.
T Consensus 155 l~~~g~~~~A~~~~~kal~l~~~~ 178 (723)
T 4gyw_A 155 LQIVCDWTDYDERMKKLVSIVADQ 178 (723)
T ss_dssp HHHTTCCTTHHHHHHHHHHHHHHH
T ss_pred HHhcccHHHHHHHHHHHHHhChhH
Confidence 777777777777777777666654
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.60 E-value=2.4e-15 Score=136.61 Aligned_cols=109 Identities=9% Similarity=-0.021 Sum_probs=99.8
Q ss_pred HHHHHHHHHHhHHhhhcC-HHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHH
Q 019495 229 QETLNSKKKGDVAFRQKD-LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 307 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~-~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 307 (340)
.+...+..+|..+...|+ +++|+..|+++|+++|+ +..+|.++|.++..+|++++|+..|++||+++|++..+|+++|
T Consensus 129 ~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~-~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg 207 (382)
T 2h6f_A 129 ANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQ 207 (382)
T ss_dssp TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHH
Confidence 445678889999999996 99999999999999999 8899999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHhhhccccccccccC
Q 019495 308 AALSAMGMENEAQVALKEGTTLEAKKNSTAG 338 (340)
Q Consensus 308 ~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 338 (340)
.++..+|++++|+.+|+++++++|.+..+|.
T Consensus 208 ~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~ 238 (382)
T 2h6f_A 208 WVIQEFKLWDNELQYVDQLLKEDVRNNSVWN 238 (382)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHcCChHHHHHHHHHHHHhCCCCHHHHH
Confidence 9999999999999999999999999887763
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.60 E-value=1.8e-15 Score=137.46 Aligned_cols=106 Identities=10% Similarity=-0.021 Sum_probs=65.8
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
...+..+|..+...|+|++|+..|+++|+++|+ +..+|.++|.++..+|++++|+..|+++|+++|++..+|+++|.++
T Consensus 166 ~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~-~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l 244 (382)
T 2h6f_A 166 YQVWHHRRVLVEWLRDPSQELEFIADILNQDAK-NYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVI 244 (382)
T ss_dssp HHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc-CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 345556666666666666666666666666666 5666666666666666666666666666666666666666666666
Q ss_pred HH-cCChHHH-----HHHHHhhhcccccccccc
Q 019495 311 SA-MGMENEA-----QVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 311 ~~-~~~~~~A-----~~~~~~al~l~p~~~~~~ 337 (340)
.. .|.+++| +++|++|++++|++..+|
T Consensus 245 ~~l~~~~~eA~~~~el~~~~~Al~l~P~~~~a~ 277 (382)
T 2h6f_A 245 SNTTGYNDRAVLEREVQYTLEMIKLVPHNESAW 277 (382)
T ss_dssp HHTTCSCSHHHHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHhcCcchHHHHHHHHHHHHHHHHHCCCCHHHH
Confidence 66 3333555 366666666666665554
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.1e-14 Score=107.32 Aligned_cols=102 Identities=12% Similarity=0.072 Sum_probs=97.1
Q ss_pred HHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCC--chHHHHHHHHH
Q 019495 232 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPI--WHIASYLQAAA 309 (340)
Q Consensus 232 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~--~~~a~~~~g~~ 309 (340)
..+...|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|+ +..+++.+|.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~ 85 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLDPE-ESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADA 85 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHH
Confidence 35677899999999999999999999999999 8899999999999999999999999999999999 99999999999
Q ss_pred HHHc-CChHHHHHHHHhhhccccccc
Q 019495 310 LSAM-GMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 310 ~~~~-~~~~~A~~~~~~al~l~p~~~ 334 (340)
+..+ |++++|+++++++++.+|.+.
T Consensus 86 ~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 86 LRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp HTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 9999 999999999999999999864
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.58 E-value=9e-16 Score=115.35 Aligned_cols=93 Identities=12% Similarity=0.009 Sum_probs=84.3
Q ss_pred hhcCHHHHHHHHHHHHhc---CCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHH
Q 019495 243 RQKDLKDAIECYTQFIDA---GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEA 319 (340)
Q Consensus 243 ~~~~~~~A~~~~~~al~~---~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A 319 (340)
..|++++|+..|++++++ +|+ +..++.++|.+|...|++++|++.++++++++|+++.+++++|.++..+|++++|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKD-LAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcc-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHH
Confidence 468999999999999999 588 8899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccccccccc
Q 019495 320 QVALKEGTTLEAKKNST 336 (340)
Q Consensus 320 ~~~~~~al~l~p~~~~~ 336 (340)
+..|+++++++|+++..
T Consensus 81 ~~~~~~al~~~p~~~~~ 97 (117)
T 3k9i_A 81 VELLLKIIAETSDDETI 97 (117)
T ss_dssp HHHHHHHHHHHCCCHHH
T ss_pred HHHHHHHHHhCCCcHHH
Confidence 99999999999987643
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.3e-14 Score=121.84 Aligned_cols=103 Identities=17% Similarity=0.094 Sum_probs=98.3
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCC-CcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGT-MVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 309 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p-~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 309 (340)
+..++..|..++..|+|++|++.|+++++++| . +...+.++|.++...|++++|++.++++++++|++..+|+.+|.+
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 85 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQ-DSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAA 85 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCC-CcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHH
Confidence 36788999999999999999999999999998 6 677888899999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHhhhccccccc
Q 019495 310 LSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 310 ~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
|..+|++++|+..|+++++++|++.
T Consensus 86 ~~~~~~~~~A~~~~~~al~~~p~~~ 110 (228)
T 4i17_A 86 YRDMKNNQEYIATLTEGIKAVPGNA 110 (228)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHcccHHHHHHHHHHHHHHCCCcH
Confidence 9999999999999999999999976
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.9e-14 Score=118.47 Aligned_cols=98 Identities=8% Similarity=-0.025 Sum_probs=90.5
Q ss_pred HHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHH---
Q 019495 236 KKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA--- 312 (340)
Q Consensus 236 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~--- 312 (340)
..|..++..|+|++|+..|+++++++|+ +..++.++|.+|...|++++|+..|+++++++|+++.+|+++|.+|+.
T Consensus 59 ~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~ 137 (208)
T 3urz_A 59 ELALAYKKNRNYDKAYLFYKELLQKAPN-NVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAE 137 (208)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhH
Confidence 3899999999999999999999999999 899999999999999999999999999999999999999888877643
Q ss_pred --------------------------------cCChHHHHHHHHhhhccccccc
Q 019495 313 --------------------------------MGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 313 --------------------------------~~~~~~A~~~~~~al~l~p~~~ 334 (340)
+|+|++|+.+|++|++++|+..
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 191 (208)
T 3urz_A 138 QEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPSTE 191 (208)
T ss_dssp HHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCHH
T ss_pred HHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHH
Confidence 3568999999999999999753
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.7e-14 Score=120.62 Aligned_cols=106 Identities=13% Similarity=-0.008 Sum_probs=95.6
Q ss_pred HHHHHHHHHhHHhhh-----------cCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCC
Q 019495 230 ETLNSKKKGDVAFRQ-----------KDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPI 298 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~-----------~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~ 298 (340)
....+...|..+... |++++|+..|+++++++|+ +..++.++|.+|...|++++|+..|+++++++ +
T Consensus 72 ~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~ 149 (217)
T 2pl2_A 72 YLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPR-YAPLHLQRGLVYALLGERDKAEASLKQALALE-D 149 (217)
T ss_dssp CHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-C
T ss_pred cHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-c
Confidence 445678889999999 9999999999999999999 88889999999999999999999999999999 8
Q ss_pred chHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 299 WHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 299 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
++.+++.+|.+|..+|++++|+..|+++++++|++..++
T Consensus 150 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~ 188 (217)
T 2pl2_A 150 TPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLR 188 (217)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHH
Confidence 999999999999999999999999999999999887553
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=5.5e-16 Score=147.05 Aligned_cols=92 Identities=14% Similarity=0.108 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-----------CccccCCcccCcccccC
Q 019495 7 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----------KSYSTNLAFTPPEYLRT 75 (340)
Q Consensus 7 ~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-----------~~~~~~~~y~aPE~~~~ 75 (340)
+.++.||++||.|||+++ |+||||||+||+++. .+||+|||+++..... .+..||+.|||||++..
T Consensus 434 ~~i~~qi~~aL~~LH~~g-IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~ 510 (540)
T 3en9_A 434 LDIAYKIGEIVGKLHKND-VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWER 510 (540)
T ss_dssp THHHHHHHHHHHHHHHTT-EECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCc-CccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHH
Confidence 578999999999999999 999999999999998 9999999999887653 24468999999999986
Q ss_pred --CCCCCCcceehHHHHHHHHhhCCCCC
Q 019495 76 --GRVTPESVIYSFGTLLLDLLSGKHIP 101 (340)
Q Consensus 76 --~~~~~~~Di~s~G~il~el~~g~~~~ 101 (340)
..|+..+|+||..+-..+-+.++.++
T Consensus 511 ~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 511 FLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 45777889999998888877776543
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=99.54 E-value=4.6e-14 Score=106.89 Aligned_cols=102 Identities=13% Similarity=0.079 Sum_probs=96.9
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCc-------hHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW-------HIA 302 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~-------~~a 302 (340)
.+..+...|..++..|+|++|+..|+++++.+|. +..++.++|.+|...|++++|+..++++++++|++ ..+
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 81 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKA 81 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHH
Confidence 4567788999999999999999999999999999 88999999999999999999999999999999887 999
Q ss_pred HHHHHHHHHHcCChHHHHHHHHhhhccccc
Q 019495 303 SYLQAAALSAMGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 303 ~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 332 (340)
++.+|.++..+|++++|+.+|+++++++|+
T Consensus 82 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 111 (131)
T 1elr_A 82 YARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999884
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=99.54 E-value=7.7e-14 Score=104.60 Aligned_cols=106 Identities=17% Similarity=0.168 Sum_probs=99.7
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
...+...|..++..|++++|++.|+++++.+|+ +...+..+|.++...|++++|+..++++++.+|++..+++.+|.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 87 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAY 87 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 456788899999999999999999999999999 7889999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHhhhcccccccccc
Q 019495 311 SAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
..+|++++|+..|+++++++|++..++
T Consensus 88 ~~~~~~~~A~~~~~~~~~~~~~~~~~~ 114 (125)
T 1na0_A 88 YKQGDYDEAIEYYQKALELDPNNAEAK 114 (125)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHhcCHHHHHHHHHHHHHhCCCcHHHH
Confidence 999999999999999999999876543
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.54 E-value=8.4e-15 Score=137.15 Aligned_cols=108 Identities=24% Similarity=0.304 Sum_probs=102.5
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
+.+..+...|+.++..|+|++|++.|++|++++|+ +..++.++|.+|..+|++++|++++++|++++|+++.+|+++|.
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~ 82 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAA 82 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45667788899999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 309 ALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 309 ~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
+|..+|++++|++.|++|++++|++..++
T Consensus 83 ~~~~~g~~~eA~~~~~~al~~~p~~~~~~ 111 (477)
T 1wao_1 83 SNMALGKFRAALRDYETVVKVKPHDKDAK 111 (477)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSTTCTTHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999987654
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.53 E-value=6.1e-14 Score=117.75 Aligned_cols=105 Identities=17% Similarity=0.139 Sum_probs=98.5
Q ss_pred HHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCch-------HHHH
Q 019495 232 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH-------IASY 304 (340)
Q Consensus 232 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~-------~a~~ 304 (340)
..+...|..++..|+|++|++.|+++++.+|+ +..++..+|.+|..+|++++|++.++++++++|++. .+|+
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 121 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKKNYN-LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYL 121 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc-hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH
Confidence 45667899999999999999999999999999 899999999999999999999999999999999998 7799
Q ss_pred HHHHHHHHcCChHHHHHHHHhhhccccc--ccccc
Q 019495 305 LQAAALSAMGMENEAQVALKEGTTLEAK--KNSTA 337 (340)
Q Consensus 305 ~~g~~~~~~~~~~~A~~~~~~al~l~p~--~~~~~ 337 (340)
.+|.++..+|++++|+..|+++++++|+ +..++
T Consensus 122 ~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 156 (228)
T 4i17_A 122 KEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDAL 156 (228)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHH
T ss_pred HHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHH
Confidence 9999999999999999999999999998 65543
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.53 E-value=6e-14 Score=113.63 Aligned_cols=107 Identities=20% Similarity=0.179 Sum_probs=79.4
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 309 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 309 (340)
+...+...|..++..|++++|+..+.+++...|+ ....+..+|.++...++++.|+..+.++++++|++..+++.+|.+
T Consensus 38 ~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~ 116 (184)
T 3vtx_A 38 NVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTT-SAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLV 116 (184)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHH
Confidence 3445566666666666666666666666666666 566666666677777777777777777888888888888888888
Q ss_pred HHHcCChHHHHHHHHhhhcccccccccc
Q 019495 310 LSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 310 ~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
|..+|++++|++.|+++++++|.+..++
T Consensus 117 ~~~~g~~~~A~~~~~~~l~~~p~~~~~~ 144 (184)
T 3vtx_A 117 YDSMGEHDKAIEAYEKTISIKPGFIRAY 144 (184)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHhCCchhHHHHHHHHHHhcchhhhHH
Confidence 8888888888888888888888876554
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.52 E-value=9.8e-14 Score=111.78 Aligned_cols=105 Identities=13% Similarity=0.061 Sum_probs=99.2
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHH-HHhcCCh--HHHHHHHHHHhhhCCCchHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLC-YLMSDMP--QDALNDAMQAQIISPIWHIASYLQA 307 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~--~~A~~~~~~al~~~p~~~~a~~~~g 307 (340)
...+...|..++..|+|++|+..|+++++++|+ +..++..+|.+ +...|++ ++|+..++++++++|++..+++.+|
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la 122 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE-NAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLA 122 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS-CHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 457788999999999999999999999999999 88999999999 8899998 9999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHhhhccccccccc
Q 019495 308 AALSAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 308 ~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
.++..+|++++|+..|+++++++|++...
T Consensus 123 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 151 (177)
T 2e2e_A 123 SDAFMQANYAQAIELWQKVMDLNSPRINR 151 (177)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTCCTTSCH
T ss_pred HHHHHcccHHHHHHHHHHHHhhCCCCccH
Confidence 99999999999999999999999997643
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.51 E-value=6.9e-15 Score=115.78 Aligned_cols=91 Identities=8% Similarity=-0.206 Sum_probs=84.0
Q ss_pred CHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHh
Q 019495 246 DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 325 (340)
Q Consensus 246 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~ 325 (340)
++..+-..|+++++++|+ +...++.+|.++...|++++|+..|+++++++|+++.+|+++|.+|..+|+|++|+.+|++
T Consensus 17 ~~~~~~~~l~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~ 95 (151)
T 3gyz_A 17 DAINSGATLKDINAIPDD-MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAV 95 (151)
T ss_dssp HHHHTSCCTGGGCCSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHCCCCHHHHhCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 334444667899999999 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccccccc
Q 019495 326 GTTLEAKKNSTA 337 (340)
Q Consensus 326 al~l~p~~~~~~ 337 (340)
|++++|++..++
T Consensus 96 al~l~P~~~~~~ 107 (151)
T 3gyz_A 96 AFALGKNDYTPV 107 (151)
T ss_dssp HHHHSSSCCHHH
T ss_pred HHhhCCCCcHHH
Confidence 999999988765
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.51 E-value=1.8e-13 Score=113.36 Aligned_cols=103 Identities=17% Similarity=0.115 Sum_probs=97.2
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCch----------
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH---------- 300 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~---------- 300 (340)
...+...|..++..|+|++|++.|+++++.+|+ +..++.++|.+|...|++++|++.+++++++.|++.
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 115 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQ 115 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBC
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccc
Confidence 457788999999999999999999999999999 889999999999999999999999999999888766
Q ss_pred ------HHHHHHHHHHHHcCChHHHHHHHHhhhccccccc
Q 019495 301 ------IASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 301 ------~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
.+++++|.++..+|++++|++.|+++++++|++.
T Consensus 116 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 155 (213)
T 1hh8_A 116 FKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 155 (213)
T ss_dssp CEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred cCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccc
Confidence 9999999999999999999999999999999764
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.50 E-value=1.5e-14 Score=106.85 Aligned_cols=96 Identities=21% Similarity=0.287 Sum_probs=90.3
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCc------hHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW------HIAS 303 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------~~a~ 303 (340)
++..+...|..++..|+|++|++.|+++++++|+ ++.++.++|.+|..+|++++|++.++++++++|++ ..++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 81 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQ 81 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHH
Confidence 4567889999999999999999999999999999 89999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHcCChHHHHHHHHhh
Q 019495 304 YLQAAALSAMGMENEAQVALKEG 326 (340)
Q Consensus 304 ~~~g~~~~~~~~~~~A~~~~~~a 326 (340)
+++|.++..+|++++|+..+++.
T Consensus 82 ~~~~~~~~~~~~~~~a~~~~~~~ 104 (111)
T 2l6j_A 82 YRLELAQGAVGSVQIPVVEVDEL 104 (111)
T ss_dssp HHHHHHHHHHHCCCCCSSSSSSC
T ss_pred HHHHHHHHHHHhHhhhHhHHHHh
Confidence 99999999999999998877654
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.1e-13 Score=103.33 Aligned_cols=86 Identities=16% Similarity=0.136 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhh
Q 019495 248 KDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGT 327 (340)
Q Consensus 248 ~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al 327 (340)
++|++.|+++++.+|+ +..++.++|.+|...|++++|+..++++++++|++..+|+.+|.+|..+|++++|+..|++++
T Consensus 2 ~~a~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 80 (115)
T 2kat_A 2 QAITERLEAMLAQGTD-NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGL 80 (115)
T ss_dssp CCHHHHHHHHHTTTCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4689999999999999 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccc
Q 019495 328 TLEAKKN 334 (340)
Q Consensus 328 ~l~p~~~ 334 (340)
+++|++.
T Consensus 81 ~~~~~~~ 87 (115)
T 2kat_A 81 AAAQSRG 87 (115)
T ss_dssp HHHHHHT
T ss_pred Hhccccc
Confidence 9999754
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.46 E-value=7e-13 Score=113.82 Aligned_cols=106 Identities=13% Similarity=-0.002 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHH
Q 019495 228 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 307 (340)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 307 (340)
......+...|..++..|++++|+..|+++++++|+ +..++..+|.+|...|++++|++.++++++++|++..+++.+|
T Consensus 40 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la 118 (275)
T 1xnf_A 40 DERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRG 118 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred chhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHH
Confidence 456778899999999999999999999999999999 8899999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHhhhccccccc
Q 019495 308 AALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 308 ~~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
.++..+|++++|+..|+++++++|++.
T Consensus 119 ~~~~~~g~~~~A~~~~~~a~~~~~~~~ 145 (275)
T 1xnf_A 119 IALYYGGRDKLAQDDLLAFYQDDPNDP 145 (275)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCCh
Confidence 999999999999999999999999875
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.45 E-value=5.7e-13 Score=110.31 Aligned_cols=102 Identities=14% Similarity=0.088 Sum_probs=94.6
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
.+...++..|..++..|+|++|+..|++++ +| ++.++.++|.+|...|++++|++.++++++++|+++.+++++|.
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~--~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~ 79 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQ--DP--HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGM 79 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CC--ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 355677899999999999999999999996 34 46789999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHhhhccccccc
Q 019495 309 ALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 309 ~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
+|..+|++++|+..|++++++.|++.
T Consensus 80 ~~~~~~~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 80 LYYQTEKYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred HHHHcccHHHHHHHHHHHHHhCCCcc
Confidence 99999999999999999999998865
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.45 E-value=5.4e-13 Score=113.21 Aligned_cols=108 Identities=19% Similarity=0.189 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHH
Q 019495 228 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 307 (340)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 307 (340)
......+...|..++..|+|++|+..|+++++.+|. +..++..+|.+|...|++++|+..++++++++|++..+|+.+|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~ 214 (258)
T 3uq3_A 136 PEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKA 214 (258)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 345667889999999999999999999999999999 8899999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHhhhccc------cccccc
Q 019495 308 AALSAMGMENEAQVALKEGTTLE------AKKNST 336 (340)
Q Consensus 308 ~~~~~~~~~~~A~~~~~~al~l~------p~~~~~ 336 (340)
.++..+|++++|+..|+++++++ |++..+
T Consensus 215 ~~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~ 249 (258)
T 3uq3_A 215 TAQIAVKEYASALETLDAARTKDAEVNNGSSAREI 249 (258)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHhChhhcCCCchHHH
Confidence 99999999999999999999999 766544
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.44 E-value=4.2e-13 Score=115.11 Aligned_cols=107 Identities=13% Similarity=0.013 Sum_probs=98.7
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcc---hHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCC---chHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---PTVYARRSLCYLMSDMPQDALNDAMQAQIISPI---WHIAS 303 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~---~~~a~ 303 (340)
....++..|..++..|+|++|+..|+++++..|+ + ..+++.+|.+|...|++++|+..|+++++++|+ ...++
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~ 92 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRT-HEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAE 92 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSC-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHH
Confidence 3567889999999999999999999999999998 6 788999999999999999999999999999885 46789
Q ss_pred HHHHHHHHH--------cCChHHHHHHHHhhhcccccccccc
Q 019495 304 YLQAAALSA--------MGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 304 ~~~g~~~~~--------~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
+.+|.++.. +|++++|+..|+++++++|++..++
T Consensus 93 ~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~ 134 (261)
T 3qky_A 93 YERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVD 134 (261)
T ss_dssp HHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHH
T ss_pred HHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHH
Confidence 999999999 9999999999999999999976543
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.3e-13 Score=134.70 Aligned_cols=106 Identities=12% Similarity=-0.071 Sum_probs=100.7
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 309 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 309 (340)
+...+...|..++..|+|++|++.|+++++++|+ +..++.++|.+|..+|++++ ++.|++|++++|++..+|+++|.+
T Consensus 466 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~-~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~ 543 (681)
T 2pzi_A 466 RWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPG-ELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARA 543 (681)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHH
Confidence 3457788999999999999999999999999999 89999999999999999999 999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHhhhcccccccccc
Q 019495 310 LSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 310 ~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
|..+|++++|+++|++|++++|++..++
T Consensus 544 ~~~~g~~~~A~~~~~~al~l~P~~~~a~ 571 (681)
T 2pzi_A 544 RSAEGDRVGAVRTLDEVPPTSRHFTTAR 571 (681)
T ss_dssp HHHTTCHHHHHHHHHTSCTTSTTHHHHH
T ss_pred HHHcCCHHHHHHHHHhhcccCcccHHHH
Confidence 9999999999999999999999987654
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.7e-13 Score=104.38 Aligned_cols=81 Identities=14% Similarity=-0.043 Sum_probs=74.8
Q ss_pred HHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccc
Q 019495 256 QFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 335 (340)
Q Consensus 256 ~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~ 335 (340)
++..++|+ .+..+.++|.+|++.|+|++|++.|++|++++|+++.+|+++|.+|..+|++++|+.+|+++++++|++..
T Consensus 4 r~a~inP~-~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 82 (126)
T 4gco_A 4 RLAYINPE-LAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIK 82 (126)
T ss_dssp ---CCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhH
Confidence 44568899 88999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred cc
Q 019495 336 TA 337 (340)
Q Consensus 336 ~~ 337 (340)
++
T Consensus 83 a~ 84 (126)
T 4gco_A 83 GY 84 (126)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.42 E-value=4.4e-13 Score=97.04 Aligned_cols=94 Identities=15% Similarity=0.090 Sum_probs=87.4
Q ss_pred HHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchH-HhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHH
Q 019495 234 SKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT-VYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 312 (340)
Q Consensus 234 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~-~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 312 (340)
.+.+|..++..|+|++|++.|+++++.+|+ +.. ++.++|.+|...|++++|++.|+++++++|++..++++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~------- 74 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPV-GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR------- 74 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSS-THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH-------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH-------
Confidence 467899999999999999999999999999 788 99999999999999999999999999999999999865
Q ss_pred cCChHHHHHHHHhhhccccccccc
Q 019495 313 MGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 313 ~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
+.+.+|+..|+++++++|.+..+
T Consensus 75 -~~~~~a~~~~~~~~~~~p~~~~~ 97 (99)
T 2kc7_A 75 -KMVMDILNFYNKDMYNQLEHHHH 97 (99)
T ss_dssp -HHHHHHHHHHCCTTHHHHCCSSC
T ss_pred -HHHHHHHHHHHHHhccCcccccC
Confidence 78899999999999999987654
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.42 E-value=7.3e-13 Score=119.04 Aligned_cols=107 Identities=14% Similarity=0.034 Sum_probs=101.0
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 309 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 309 (340)
....++..|..++..|+|++|+..|+++++.+|+ +..++..+|.+|...|++++|++.|+++++++|++..+++.+|.+
T Consensus 64 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 142 (365)
T 4eqf_A 64 DWPGAFEEGLKRLKEGDLPVTILFMEAAILQDPG-DAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVS 142 (365)
T ss_dssp TCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 3456788999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHhhhcccccccccc
Q 019495 310 LSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 310 ~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
|..+|++++|+..|+++++++|++..++
T Consensus 143 ~~~~g~~~~A~~~~~~al~~~p~~~~~~ 170 (365)
T 4eqf_A 143 YTNTSHQQDACEALKNWIKQNPKYKYLV 170 (365)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCHHHHCC-
T ss_pred HHccccHHHHHHHHHHHHHhCccchHHH
Confidence 9999999999999999999999977655
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.42 E-value=8.4e-13 Score=110.87 Aligned_cols=107 Identities=9% Similarity=-0.032 Sum_probs=96.4
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcc--hHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchH---HHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS--PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI---ASYL 305 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~--~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~---a~~~ 305 (340)
...++..|..++..|+|++|+..|+++++..|+.. ..+++.+|.+|...|++++|+..|+++++.+|++.. +++.
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~ 83 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYM 83 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHH
Confidence 45678899999999999999999999999998821 367888999999999999999999999999999875 8999
Q ss_pred HHHHHHH------------------cCChHHHHHHHHhhhcccccccccc
Q 019495 306 QAAALSA------------------MGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 306 ~g~~~~~------------------~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
+|.++.. +|++++|+..|+++++.+|++..++
T Consensus 84 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~ 133 (225)
T 2yhc_A 84 RGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTT 133 (225)
T ss_dssp HHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHH
T ss_pred HHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHH
Confidence 9999986 6799999999999999999987653
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.41 E-value=1.7e-12 Score=98.26 Aligned_cols=102 Identities=19% Similarity=0.186 Sum_probs=94.5
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
...+...|..++..|++++|+..|+++++.+|. ....+..++.++...|++++|+..++++++.+|++..+++.+|.++
T Consensus 35 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 113 (136)
T 2fo7_A 35 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAY 113 (136)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 446677899999999999999999999999999 7888899999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHhhhcccccc
Q 019495 311 SAMGMENEAQVALKEGTTLEAKK 333 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~~ 333 (340)
..+|++++|+..|+++++++|.+
T Consensus 114 ~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 114 YKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp HTTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHccHHHHHHHHHHHHccCCCC
Confidence 99999999999999999998863
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.41 E-value=3.3e-12 Score=96.69 Aligned_cols=103 Identities=18% Similarity=0.193 Sum_probs=96.7
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHH
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 312 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 312 (340)
.+...|..++..|++++|+..|+++++.+|. +...+..++.++...|++++|+..++++++.+|.+..+++.+|.++..
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 81 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcCCc-chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH
Confidence 4567889999999999999999999999999 788899999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHhhhccccccccc
Q 019495 313 MGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 313 ~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
.|++++|+..++++++.+|++..+
T Consensus 82 ~~~~~~A~~~~~~~~~~~~~~~~~ 105 (136)
T 2fo7_A 82 QGDYDEAIEYYQKALELDPRSAEA 105 (136)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred hcCHHHHHHHHHHHHHhCCCChHH
Confidence 999999999999999999986543
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.3e-12 Score=116.19 Aligned_cols=106 Identities=17% Similarity=0.200 Sum_probs=100.5
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 309 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 309 (340)
++..+...|..++..|+|++|+..|+++++.+|+ +..++..+|.++...|++++|+..++++++++|++..+++.+|.+
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 80 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHL 80 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHH
Confidence 4567889999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHhhhcccc---ccccc
Q 019495 310 LSAMGMENEAQVALKEGTTLEA---KKNST 336 (340)
Q Consensus 310 ~~~~~~~~~A~~~~~~al~l~p---~~~~~ 336 (340)
+..+|++++|+..|+++++++| ++..+
T Consensus 81 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 110 (359)
T 3ieg_A 81 LLKQGKLDEAEDDFKKVLKSNPSEQEEKEA 110 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred HHHcCChHHHHHHHHHHHhcCCcccChHHH
Confidence 9999999999999999999999 65543
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.3e-12 Score=124.99 Aligned_cols=105 Identities=10% Similarity=-0.004 Sum_probs=72.3
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
...+...|..+...|++++|++.|+++++++|+ +..++.++|.+|...|++++|++.++++++++|++..+++++|.++
T Consensus 57 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 135 (568)
T 2vsy_A 57 PEAVARLGRVRWTQQRHAEAAVLLQQASDAAPE-HPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWR 135 (568)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 445566666677777777777777777777776 6666666777777777777777777777777777777777777777
Q ss_pred HHc---CChHHHHHHHHhhhccccccccc
Q 019495 311 SAM---GMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 311 ~~~---~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
..+ |++++|++.|+++++.+|++..+
T Consensus 136 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 164 (568)
T 2vsy_A 136 RRLCDWRALDVLSAQVRAAVAQGVGAVEP 164 (568)
T ss_dssp HHTTCCTTHHHHHHHHHHHHHHTCCCSCH
T ss_pred HHhhccccHHHHHHHHHHHHhcCCcccCh
Confidence 777 77777777777777777665443
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.9e-13 Score=107.11 Aligned_cols=88 Identities=10% Similarity=-0.067 Sum_probs=81.5
Q ss_pred HHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhc
Q 019495 249 DAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTT 328 (340)
Q Consensus 249 ~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ 328 (340)
.+-..|+++++++|+ +...++.+|.++...|++++|+..|+++++++|+++.+|+.+|.++..+|+|++|+.+|+++++
T Consensus 5 ~~~~~~~~al~~~p~-~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 5 SGGGTIAMLNEISSD-TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAV 83 (148)
T ss_dssp -CCCSHHHHTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred chhhhHHHHHcCCHh-hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 334568899999999 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccc
Q 019495 329 LEAKKNSTA 337 (340)
Q Consensus 329 l~p~~~~~~ 337 (340)
++|++..++
T Consensus 84 l~p~~~~~~ 92 (148)
T 2vgx_A 84 MDIXEPRFP 92 (148)
T ss_dssp HSTTCTHHH
T ss_pred cCCCCchHH
Confidence 999987654
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.40 E-value=2.5e-12 Score=120.36 Aligned_cols=107 Identities=21% Similarity=0.270 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHH
Q 019495 227 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 306 (340)
Q Consensus 227 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 306 (340)
+.+.+..++..|+.++..|+|++|+..|+++++.+|+ ..++..+|.+|...|++++|+..++++++++|++..+++.+
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 79 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALELKED--PVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRR 79 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc--HHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHH
Confidence 4567889999999999999999999999999999996 67888999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHhhhcccccccc
Q 019495 307 AAALSAMGMENEAQVALKEGTTLEAKKNS 335 (340)
Q Consensus 307 g~~~~~~~~~~~A~~~~~~al~l~p~~~~ 335 (340)
|.++..+|++++|+..|+++++++|.+..
T Consensus 80 ~~~~~~~g~~~~A~~~~~~~~~~~~~~~~ 108 (514)
T 2gw1_A 80 ASANEGLGKFADAMFDLSVLSLNGDFNDA 108 (514)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHSSSCCGG
T ss_pred HHHHHHHhhHHHHHHHHHHHHhcCCCccc
Confidence 99999999999999999999999986543
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.40 E-value=3.5e-12 Score=102.25 Aligned_cols=105 Identities=14% Similarity=0.050 Sum_probs=99.1
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
...+...|..++..|++++|++.|+++++.+|. +..++..+|.++...|++++|++.++++++.+|++..+++.+|.++
T Consensus 76 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 154 (186)
T 3as5_A 76 VKVATVLGLTYVQVQKYDLAVPLLIKVAEANPI-NFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSY 154 (186)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcH-hHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHH
Confidence 446678899999999999999999999999999 8899999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHhhhccccccccc
Q 019495 311 SAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
..+|++++|+..++++++++|++..+
T Consensus 155 ~~~~~~~~A~~~~~~~~~~~~~~~~~ 180 (186)
T 3as5_A 155 EQMGRHEEALPHFKKANELDEGASVE 180 (186)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHCCCGG
T ss_pred HHcCCHHHHHHHHHHHHHcCCCchhh
Confidence 99999999999999999999997754
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.39 E-value=5.9e-13 Score=124.56 Aligned_cols=106 Identities=12% Similarity=0.054 Sum_probs=100.5
Q ss_pred HHHHHHHHhHHhhh---------cCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhc--------CChHHHHHHHHHHh
Q 019495 231 TLNSKKKGDVAFRQ---------KDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS--------DMPQDALNDAMQAQ 293 (340)
Q Consensus 231 ~~~~~~~a~~~~~~---------~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~--------~~~~~A~~~~~~al 293 (340)
...+...|..+... |++++|++.|+++++++|+ +..+|.++|.+|... |++++|+..|++|+
T Consensus 170 ~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al 248 (474)
T 4abn_A 170 KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVL-DGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAE 248 (474)
T ss_dssp HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Confidence 36778889999999 9999999999999999999 899999999999999 99999999999999
Q ss_pred hhCC---CchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 294 IISP---IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 294 ~~~p---~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
+++| +++.+|+++|.+|..+|+|++|+++|++|++++|++..++
T Consensus 249 ~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~ 295 (474)
T 4abn_A 249 KVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQ 295 (474)
T ss_dssp HHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999 9999999999999999999999999999999999987654
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.39 E-value=3.7e-14 Score=114.31 Aligned_cols=104 Identities=11% Similarity=0.041 Sum_probs=90.8
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH-HH
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA-LS 311 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~-~~ 311 (340)
.+...++.++..|+|++|+..|+++++.+|+ +..++..+|.+|...|++++|+..|+++++++|+++.+++.+|.+ +.
T Consensus 12 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~ 90 (177)
T 2e2e_A 12 RQRDPLHQFASQQNPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYY 90 (177)
T ss_dssp CSSTTTCCCC-----CCCCHHHHHHHHHCCS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHH
T ss_pred HHhhhhhhhhhccCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 3444556678899999999999999999999 889999999999999999999999999999999999999999999 88
Q ss_pred HcCCh--HHHHHHHHhhhcccccccccc
Q 019495 312 AMGME--NEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 312 ~~~~~--~~A~~~~~~al~l~p~~~~~~ 337 (340)
..|++ ++|+..|+++++++|++..++
T Consensus 91 ~~~~~~~~~A~~~~~~al~~~p~~~~~~ 118 (177)
T 2e2e_A 91 QASQHMTAQTRAMIDKALALDSNEITAL 118 (177)
T ss_dssp HTTTCCCHHHHHHHHHHHHHCTTCHHHH
T ss_pred hcCCcchHHHHHHHHHHHHhCCCcHHHH
Confidence 99999 999999999999999986553
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.38 E-value=2.4e-12 Score=115.63 Aligned_cols=103 Identities=15% Similarity=0.153 Sum_probs=97.9
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
...+...|..+...|++++|++.|+++++.+|+ +..++.++|.+|...|++++|+..|+++++++|++..+++.+|.+|
T Consensus 213 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 291 (365)
T 4eqf_A 213 PDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPE-DYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISC 291 (365)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 456778899999999999999999999999999 8899999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHhhhccccccc
Q 019495 311 SAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
..+|++++|+..|+++++++|+..
T Consensus 292 ~~~g~~~~A~~~~~~al~~~~~~~ 315 (365)
T 4eqf_A 292 INLGAYREAVSNFLTALSLQRKSR 315 (365)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHCC-
T ss_pred HHCCCHHHHHHHHHHHHHhCcccC
Confidence 999999999999999999999853
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=2.3e-12 Score=112.45 Aligned_cols=102 Identities=12% Similarity=0.003 Sum_probs=83.7
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHH------------------------
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDAL------------------------ 286 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~------------------------ 286 (340)
...+...|..++..|++++|+..|+++++.+|+ +..++..+|.++...|++++|+
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l 195 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQLSNQ-NGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIEL 195 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTS-CHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCc-chhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHH
Confidence 345567777777778888888888888888887 6777777777777777777655
Q ss_pred ----------HHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccc
Q 019495 287 ----------NDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 333 (340)
Q Consensus 287 ----------~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 333 (340)
..++++++++|+++.+++.+|.+|...|++++|+..|+++++++|++
T Consensus 196 ~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 196 LXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG
T ss_pred HhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccc
Confidence 45555677899999999999999999999999999999999999987
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.8e-12 Score=104.44 Aligned_cols=106 Identities=12% Similarity=-0.058 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHH-HhcCChHHHHHHHHHHhhhCCCchHHHHH
Q 019495 227 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCY-LMSDMPQDALNDAMQAQIISPIWHIASYL 305 (340)
Q Consensus 227 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 305 (340)
...+...+...|..+...|++++|+..|+++++.+|+ +.++..++.+. ...++..+|+..++++++++|+++.+++.
T Consensus 36 ~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~--~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~ 113 (176)
T 2r5s_A 36 LQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQD--NSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACE 113 (176)
T ss_dssp HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCC--HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCC--hHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHH
Confidence 3445567888899999999999999999999988882 34444444332 23334446899999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHhhhccccccc
Q 019495 306 QAAALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 306 ~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
+|.++..+|++++|+..|+++++++|+..
T Consensus 114 la~~~~~~g~~~~A~~~~~~~l~~~p~~~ 142 (176)
T 2r5s_A 114 LAVQYNQVGRDEEALELLWNILKVNLGAQ 142 (176)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCTTTT
T ss_pred HHHHHHHcccHHHHHHHHHHHHHhCcccC
Confidence 99999999999999999999999999853
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.37 E-value=4.2e-12 Score=101.79 Aligned_cols=105 Identities=14% Similarity=0.086 Sum_probs=98.4
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
...+...|..++..|++++|+..|+++++.+|+ +..++..+|.++...|++++|++.++++++.+|++..+++.+|.++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 120 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLADAPD-NVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVAL 120 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHH
Confidence 456678899999999999999999999999999 8899999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHhhhccccccccc
Q 019495 311 SAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
..+|++++|+..|+++++++|.+..+
T Consensus 121 ~~~~~~~~A~~~~~~~~~~~~~~~~~ 146 (186)
T 3as5_A 121 DNLGRFDEAIDSFKIALGLRPNEGKV 146 (186)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHcCcHHHHHHHHHHHHhcCccchHH
Confidence 99999999999999999999987543
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.37 E-value=8.3e-13 Score=123.58 Aligned_cols=106 Identities=9% Similarity=-0.033 Sum_probs=100.9
Q ss_pred HHHHHHHHHhHHhhhcCH-HHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDL-KDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~-~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
.+..+...|..++..|+| ++|++.|+++++++|+ +..++..+|.+|...|++++|++.|+++++++|+ ..+++++|.
T Consensus 101 ~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~ 178 (474)
T 4abn_A 101 EAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPE-LVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLSM 178 (474)
T ss_dssp CHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHHH
Confidence 456788999999999999 9999999999999999 8999999999999999999999999999999999 699999999
Q ss_pred HHHHc---------CChHHHHHHHHhhhcccccccccc
Q 019495 309 ALSAM---------GMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 309 ~~~~~---------~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
+|..+ |++++|+..|++|++++|++..+|
T Consensus 179 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 216 (474)
T 4abn_A 179 VLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSW 216 (474)
T ss_dssp HHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999 999999999999999999987654
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.37 E-value=3.1e-12 Score=107.65 Aligned_cols=106 Identities=12% Similarity=0.054 Sum_probs=99.9
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
...+...|..++..|++++|+..|+++++..|+ +..++..+|.++...|++++|+..++++++.+|++..+++.+|.++
T Consensus 125 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 203 (243)
T 2q7f_A 125 GDLFYMLGTVLVKLEQPKLALPYLQRAVELNEN-DTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTY 203 (243)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 345778899999999999999999999999999 8899999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHhhhcccccccccc
Q 019495 311 SAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
..+|++++|+..|+++++++|++..++
T Consensus 204 ~~~~~~~~A~~~~~~~~~~~p~~~~~~ 230 (243)
T 2q7f_A 204 AYKENREKALEMLDKAIDIQPDHMLAL 230 (243)
T ss_dssp HHTTCTTHHHHHHHHHHHHCTTCHHHH
T ss_pred HHccCHHHHHHHHHHHHccCcchHHHH
Confidence 999999999999999999999987654
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.37 E-value=4.8e-12 Score=113.45 Aligned_cols=107 Identities=9% Similarity=0.050 Sum_probs=101.0
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
...+...|..++..|+|++|+..|+++++.+|+ +..++..+|.+|...|++++|++.++++++++|++..+++.+|.++
T Consensus 64 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 142 (368)
T 1fch_A 64 HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSF 142 (368)
T ss_dssp CSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 345678899999999999999999999999999 8899999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHhhhccccccccccC
Q 019495 311 SAMGMENEAQVALKEGTTLEAKKNSTAG 338 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~~~~~~~ 338 (340)
..+|++++|+..|+++++++|++..++.
T Consensus 143 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~ 170 (368)
T 1fch_A 143 TNESLQRQACEILRDWLRYTPAYAHLVT 170 (368)
T ss_dssp HHTTCHHHHHHHHHHHHHTSTTTGGGCC
T ss_pred HHcCCHHHHHHHHHHHHHhCcCcHHHHH
Confidence 9999999999999999999999877653
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=99.37 E-value=1.2e-12 Score=95.33 Aligned_cols=76 Identities=12% Similarity=0.048 Sum_probs=68.1
Q ss_pred cCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhccccccccc
Q 019495 260 AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 260 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
.+|+ ++.+++.+|.+|...|++++|+..|+++++++|+++.+|+.+|.+|..+|++++|+..|+++++++|++...
T Consensus 2 ~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~ 77 (100)
T 3ma5_A 2 EDPE-DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQ 77 (100)
T ss_dssp ---C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCH
T ss_pred CCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCch
Confidence 4688 888999999999999999999999999999999999999999999999999999999999999999876543
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.9e-12 Score=111.16 Aligned_cols=107 Identities=5% Similarity=-0.112 Sum_probs=93.8
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCC---cchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTM---VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 306 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 306 (340)
....+...|..++..|+|++|++.|+++++ .|. .....+..+|.+|...|++++|++.++++++++|++..+++.+
T Consensus 36 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l 114 (272)
T 3u4t_A 36 SPYIYNRRAVCYYELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQI 114 (272)
T ss_dssp CSTTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHH
Confidence 344778889999999999999999999999 343 1133488899999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 307 AAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 307 g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
|.++..+|++++|+..|+++++++|.+..++
T Consensus 115 ~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 145 (272)
T 3u4t_A 115 GSYFYNKGNFPLAIQYMEKQIRPTTTDPKVF 145 (272)
T ss_dssp HHHHHHTTCHHHHHHHHGGGCCSSCCCHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHhhcCCCcHHHH
Confidence 9999999999999999999999999876554
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.36 E-value=6.1e-12 Score=111.80 Aligned_cols=108 Identities=14% Similarity=0.110 Sum_probs=97.9
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcch----HHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHH
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP----TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 304 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 304 (340)
.........|..++..|++++|+..|+++++..|+ +. ..+..+|.++...|++++|++.++++++++|+++.+++
T Consensus 232 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 310 (359)
T 3ieg_A 232 KKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS-VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALK 310 (359)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHH
Confidence 33445567799999999999999999999999999 55 34667899999999999999999999999999999999
Q ss_pred HHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 305 LQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 305 ~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
.+|.++..+|++++|+..|+++++++|++..++
T Consensus 311 ~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~ 343 (359)
T 3ieg_A 311 DRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIR 343 (359)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCCChHHH
Confidence 999999999999999999999999999987654
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.35 E-value=2.4e-12 Score=121.38 Aligned_cols=109 Identities=21% Similarity=0.306 Sum_probs=95.8
Q ss_pred hHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHH
Q 019495 226 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 305 (340)
Q Consensus 226 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 305 (340)
++...+..+...|+.++..|+|++|++.|+++++.+|+ ++.++.++|.+|..+|++++|++.++++++++|++..+++.
T Consensus 20 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 98 (537)
T 3fp2_A 20 QRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLR 98 (537)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHH
Confidence 44567789999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHhhhccccccccc
Q 019495 306 QAAALSAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 306 ~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
+|.++..+|++++|+..|+ +++++|+...+
T Consensus 99 la~~~~~~g~~~~A~~~~~-~~~~~~~~~~~ 128 (537)
T 3fp2_A 99 RASANESLGNFTDAMFDLS-VLSLNGDFDGA 128 (537)
T ss_dssp HHHHHHHHTCHHHHHHHHH-HHC--------
T ss_pred HHHHHHHcCCHHHHHHHHH-HHhcCCCCChH
Confidence 9999999999999999996 99999986554
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.35 E-value=4.1e-12 Score=117.14 Aligned_cols=107 Identities=19% Similarity=0.211 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHH
Q 019495 227 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 306 (340)
Q Consensus 227 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 306 (340)
...+...+...|..++..|+|++|+..|+++++.+|+ +..++..+|.+|...|++++|+..++++++++|++..+++.+
T Consensus 22 ~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 100 (450)
T 2y4t_A 22 SMADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQR 100 (450)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 3456778899999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHhhhccccccc
Q 019495 307 AAALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 307 g~~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
|.+|..+|++++|+..|+++++++|++.
T Consensus 101 ~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 128 (450)
T 2y4t_A 101 GHLLLKQGKLDEAEDDFKKVLKSNPSEN 128 (450)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTSCCCHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCCCh
Confidence 9999999999999999999999999876
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.35 E-value=4.6e-12 Score=107.37 Aligned_cols=97 Identities=9% Similarity=-0.060 Sum_probs=82.2
Q ss_pred HHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHH
Q 019495 240 VAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEA 319 (340)
Q Consensus 240 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A 319 (340)
.+...|++++|+..++++++.+|. ...++..+|.++...|++++|+..++++++++|++..+++.+|.++..+|++++|
T Consensus 114 ~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A 192 (258)
T 3uq3_A 114 ILTKLRNAEKELKKAEAEAYVNPE-KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEA 192 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHcCcc-hHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHH
Confidence 344444444444444444448888 7889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcccccccccc
Q 019495 320 QVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 320 ~~~~~~al~l~p~~~~~~ 337 (340)
+..|+++++++|++..++
T Consensus 193 ~~~~~~al~~~~~~~~~~ 210 (258)
T 3uq3_A 193 IADCNKAIEKDPNFVRAY 210 (258)
T ss_dssp HHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHhCHHHHHHH
Confidence 999999999999976543
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.35 E-value=4.2e-12 Score=113.82 Aligned_cols=103 Identities=13% Similarity=0.158 Sum_probs=98.7
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 309 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 309 (340)
....+...|..++..|++++|+..|+++++.+|+ +..++.++|.++...|++++|+..++++++++|++..+++.+|.+
T Consensus 216 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 294 (368)
T 1fch_A 216 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGIS 294 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 3556788899999999999999999999999999 889999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHhhhcccccc
Q 019495 310 LSAMGMENEAQVALKEGTTLEAKK 333 (340)
Q Consensus 310 ~~~~~~~~~A~~~~~~al~l~p~~ 333 (340)
+..+|++++|+..|+++++++|++
T Consensus 295 ~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 295 CINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHCCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999987
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.34 E-value=4.6e-12 Score=108.68 Aligned_cols=104 Identities=12% Similarity=-0.007 Sum_probs=85.6
Q ss_pred HHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHH
Q 019495 232 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 311 (340)
Q Consensus 232 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 311 (340)
..+...|..+...|++++|++.|+++++.+|+ ...++..+|.+|...|++++|++.++++++++|++..+++.+|...+
T Consensus 75 ~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 153 (272)
T 3u4t_A 75 ADFEYYGKILMKKGQDSLAIQQYQAAVDRDTT-RLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYY 153 (272)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 34677888888888888888888888888888 77888888888888888888888888888888888888888885455
Q ss_pred HcCChHHHHHHHHhhhccccccccc
Q 019495 312 AMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 312 ~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
..+++++|+..|+++++++|++..+
T Consensus 154 ~~~~~~~A~~~~~~a~~~~p~~~~~ 178 (272)
T 3u4t_A 154 YNKEYVKADSSFVKVLELKPNIYIG 178 (272)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHhCccchHH
Confidence 5568888888888888888886543
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.34 E-value=5.4e-12 Score=114.35 Aligned_cols=104 Identities=13% Similarity=0.070 Sum_probs=84.2
Q ss_pred HHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHH
Q 019495 232 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 311 (340)
Q Consensus 232 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 311 (340)
..+...|..+...|++++|++.|+++++.+|+ +...+.+++.++...|++++|+..++++++++|++..+++.+|.+|.
T Consensus 272 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 350 (388)
T 1w3b_A 272 DAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQ 350 (388)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 35667777788888888888888888888887 77777788888888888888888888888888888888888888888
Q ss_pred HcCChHHHHHHHHhhhccccccccc
Q 019495 312 AMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 312 ~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
.+|++++|+..|+++++++|++..+
T Consensus 351 ~~g~~~~A~~~~~~a~~~~p~~~~a 375 (388)
T 1w3b_A 351 QQGKLQEALMHYKEAIRISPTFADA 375 (388)
T ss_dssp TTTCCHHHHHHHHHHHTTCTTCHHH
T ss_pred HcCCHHHHHHHHHHHHhhCCCCHHH
Confidence 8888888888888888888876654
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.33 E-value=9e-12 Score=104.79 Aligned_cols=106 Identities=16% Similarity=0.132 Sum_probs=92.8
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 309 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 309 (340)
....+...|..++..|++++|++.|+++++.+|. +...+..+|.++...|++++|+..++++++++|++..+++.+|.+
T Consensus 90 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 168 (243)
T 2q7f_A 90 AATAYYGAGNVYVVKEMYKEAKDMFEKALRAGME-NGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMC 168 (243)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCC-SHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHH
Confidence 3456677888889999999999999999999988 778888889999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHhhhccccccccc
Q 019495 310 LSAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 310 ~~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
+..+|++++|+..|+++++++|++..+
T Consensus 169 ~~~~~~~~~A~~~~~~~~~~~~~~~~~ 195 (243)
T 2q7f_A 169 LANEGMLDEALSQFAAVTEQDPGHADA 195 (243)
T ss_dssp HHHHTCCHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCcccHHH
Confidence 999999999999999999988876544
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.33 E-value=7.3e-12 Score=109.47 Aligned_cols=107 Identities=12% Similarity=0.002 Sum_probs=89.7
Q ss_pred HHHHHHHHHhHHhhh-cCHHHHHHHHHHHHhcCCCcc-----hHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchH--
Q 019495 230 ETLNSKKKGDVAFRQ-KDLKDAIECYTQFIDAGTMVS-----PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI-- 301 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~-~~~~~A~~~~~~al~~~p~~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~-- 301 (340)
.+..+...|..+... |++++|+..|++|+++.|... ..++.++|.+|..+|++++|+..|+++++++|++..
T Consensus 116 ~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 195 (292)
T 1qqe_A 116 GANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQ 195 (292)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTG
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCccc
Confidence 355778899999996 999999999999999987521 467888999999999999999999999999988653
Q ss_pred -----HHHHHHHHHHHcCChHHHHHHHHhhhccccccccc
Q 019495 302 -----ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 302 -----a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
+++++|.++..+|++++|+.+|+++++++|+...+
T Consensus 196 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~ 235 (292)
T 1qqe_A 196 WSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADS 235 (292)
T ss_dssp GGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-------
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCc
Confidence 68999999999999999999999999999987654
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.32 E-value=1.3e-11 Score=102.31 Aligned_cols=105 Identities=14% Similarity=0.052 Sum_probs=92.8
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhc-CChHHHHHHHHHHhh--hCCCchHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS-DMPQDALNDAMQAQI--ISPIWHIASYLQA 307 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~-~~~~~A~~~~~~al~--~~p~~~~a~~~~g 307 (340)
...+...|..+...|++++|++.|+++++.+|+ +...+..+|.++... |++++|+..++++++ .+|.+..+++.+|
T Consensus 42 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~ 120 (225)
T 2vq2_A 42 ELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD-SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKG 120 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHH
Confidence 456777888899999999999999999999998 788888899999999 999999999999999 6777789999999
Q ss_pred HHHHHcCChHHHHHHHHhhhccccccccc
Q 019495 308 AALSAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 308 ~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
.++..+|++++|+..|+++++.+|++..+
T Consensus 121 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 149 (225)
T 2vq2_A 121 ICSAKQGQFGLAEAYLKRSLAAQPQFPPA 149 (225)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCchH
Confidence 99999999999999999999998886544
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.32 E-value=1e-11 Score=105.29 Aligned_cols=103 Identities=12% Similarity=0.001 Sum_probs=72.4
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhh--hCCCchHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI--ISPIWHIASYLQAA 308 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~--~~p~~~~a~~~~g~ 308 (340)
...+...|..++..|++++|++.|+++++.+|. +..++..+|.+|...|++++|++.++++++ .+|.+..+++.+|.
T Consensus 71 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~ 149 (252)
T 2ho1_A 71 ADAHAALAVVFQTEMEPKLADEEYRKALASDSR-NARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGL 149 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHH
Confidence 345566667777777777777777777777776 566666677777777777777777777777 66666777777777
Q ss_pred HHHHcCChHHHHHHHHhhhccccccc
Q 019495 309 ALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 309 ~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
++..+|++++|+..|+++++++|.+.
T Consensus 150 ~~~~~g~~~~A~~~~~~~~~~~~~~~ 175 (252)
T 2ho1_A 150 VSLQMKKPAQAKEYFEKSLRLNRNQP 175 (252)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCSCCH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCcccH
Confidence 77777777777777777777766654
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.32 E-value=6.5e-12 Score=110.49 Aligned_cols=107 Identities=15% Similarity=0.065 Sum_probs=98.8
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcC---------CCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCch
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAG---------TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 300 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~---------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 300 (340)
+...+...|..++..|++++|+..|+++++.. |. ...++..+|.+|...|++++|+..++++++++|++.
T Consensus 192 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 270 (330)
T 3hym_B 192 DPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDK-WEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNA 270 (330)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTT-CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCS
T ss_pred ChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccch
Confidence 34567888999999999999999999999986 44 567899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 301 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 301 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
.+++.+|.++..+|++++|+++|+++++++|++..++
T Consensus 271 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 307 (330)
T 3hym_B 271 STYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSV 307 (330)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHH
Confidence 9999999999999999999999999999999987554
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.32 E-value=9.7e-12 Score=112.65 Aligned_cols=105 Identities=14% Similarity=0.050 Sum_probs=96.2
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
...+...|..++..|++++|++.|+++++.+|+ .+..+.++|.++...|++++|++.++++++++|++..+++.+|.++
T Consensus 237 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 315 (388)
T 1w3b_A 237 AVVHGNLACVYYEQGLIDLAIDTYRRAIELQPH-FPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIK 315 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS-CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHH
Confidence 446677889999999999999999999999999 8888999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHhhhccccccccc
Q 019495 311 SAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
..+|++++|+..|+++++++|++..+
T Consensus 316 ~~~g~~~~A~~~~~~al~~~p~~~~~ 341 (388)
T 1w3b_A 316 REQGNIEEAVRLYRKALEVFPEFAAA 341 (388)
T ss_dssp HTTTCHHHHHHHHHHHTTSCTTCHHH
T ss_pred HHcCCHHHHHHHHHHHHhcCCCcHHH
Confidence 99999999999999999999987644
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.32 E-value=7.7e-12 Score=107.16 Aligned_cols=104 Identities=14% Similarity=0.114 Sum_probs=95.4
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCc--chHHhhhhHHHHHh--------cCChHHHHHHHHHHhhhCCCch
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--SPTVYARRSLCYLM--------SDMPQDALNDAMQAQIISPIWH 300 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~~~~~~~~~--------~~~~~~A~~~~~~al~~~p~~~ 300 (340)
...++..|..++..|+|++|+..|+++++..|++ ...+++.+|.+|.. .|++++|+..++++++.+|++.
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 5677899999999999999999999999998852 45778899999999 9999999999999999999987
Q ss_pred HHH-----------------HHHHHHHHHcCChHHHHHHHHhhhccccccc
Q 019495 301 IAS-----------------YLQAAALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 301 ~a~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
.+. +.+|.+|..+|+|++|+..|+++++.+|++.
T Consensus 132 ~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~ 182 (261)
T 3qky_A 132 LVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTP 182 (261)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTST
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCc
Confidence 766 8899999999999999999999999999854
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.32 E-value=2e-11 Score=86.29 Aligned_cols=84 Identities=17% Similarity=0.160 Sum_probs=77.1
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 309 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 309 (340)
....+...|..++..|+|++|+..|+++++.+|+ +...+.++|.++...|++++|+..++++++++|++..+++++|.+
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 86 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNA 86 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 3556788899999999999999999999999999 888899999999999999999999999999999999999999999
Q ss_pred HHHcC
Q 019495 310 LSAMG 314 (340)
Q Consensus 310 ~~~~~ 314 (340)
+..+|
T Consensus 87 ~~~~g 91 (91)
T 1na3_A 87 KQKQG 91 (91)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 88765
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=4.5e-13 Score=116.58 Aligned_cols=58 Identities=16% Similarity=0.105 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCccccCCcccCccccc
Q 019495 6 RLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLR 74 (340)
Q Consensus 6 ~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~ 74 (340)
...++.||+.||.|||+.+ |+||||||+||+++ +|.+||+|||+++. +..++|||++.
T Consensus 195 ~~~i~~qi~~~l~~lH~~g-iiHrDlkp~NILl~-~~~vkl~DFG~a~~---------~~~~~a~e~l~ 252 (282)
T 1zar_A 195 PDEVLDMILEEVAKFYHRG-IVHGDLSQYNVLVS-EEGIWIIDFPQSVE---------VGEEGWREILE 252 (282)
T ss_dssp HHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEE-TTEEEECCCTTCEE---------TTSTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCC-CEeCCCCHHHEEEE-CCcEEEEECCCCeE---------CCCCCHHHHHH
Confidence 4579999999999999999 99999999999999 99999999999864 34578898875
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.31 E-value=8.9e-12 Score=108.97 Aligned_cols=95 Identities=12% Similarity=0.002 Sum_probs=87.6
Q ss_pred HhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHH-H
Q 019495 241 AFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENE-A 319 (340)
Q Consensus 241 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~-A 319 (340)
+...|++++|+..|+++++..|+ ++.+++++|.++..+|++++|++.++++++++|+++.+++++|.++..+|++++ +
T Consensus 176 ~~~~~~~~eA~~~~~~~l~~~p~-~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa 254 (291)
T 3mkr_A 176 AAGGEKLQDAYYIFQEMADKCSP-TLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVT 254 (291)
T ss_dssp HHCTTHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHH
T ss_pred HhCchHHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHH
Confidence 34568999999999999999999 899999999999999999999999999999999999999999999999999987 5
Q ss_pred HHHHHhhhccccccccc
Q 019495 320 QVALKEGTTLEAKKNST 336 (340)
Q Consensus 320 ~~~~~~al~l~p~~~~~ 336 (340)
.++++++++++|+++.+
T Consensus 255 ~~~~~~~~~~~P~~~~~ 271 (291)
T 3mkr_A 255 NRYLSQLKDAHRSHPFI 271 (291)
T ss_dssp HHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHhCCCChHH
Confidence 68889999999998643
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.31 E-value=1.7e-11 Score=107.61 Aligned_cols=107 Identities=12% Similarity=0.055 Sum_probs=100.8
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 309 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 309 (340)
....++.+|..++..|+|++|+..|+++++.+|+ +...+..+|.++...|++++|++.++++++++|++..+++.+|.+
T Consensus 20 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 98 (327)
T 3cv0_A 20 YHENPMEEGLSMLKLANLAEAALAFEAVCQAAPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVS 98 (327)
T ss_dssp GSSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHH
Confidence 4456788999999999999999999999999999 889999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHhhhcccccccccc
Q 019495 310 LSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 310 ~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
+..+|++++|+..|+++++++|++..++
T Consensus 99 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 126 (327)
T 3cv0_A 99 HTNEHNANAALASLRAWLLSQPQYEQLG 126 (327)
T ss_dssp HHHTTCHHHHHHHHHHHHHTSTTTTTC-
T ss_pred HHHcCCHHHHHHHHHHHHHhCCccHHHH
Confidence 9999999999999999999999987665
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.31 E-value=2e-12 Score=100.35 Aligned_cols=85 Identities=7% Similarity=-0.067 Sum_probs=77.5
Q ss_pred HHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccc
Q 019495 252 ECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEA 331 (340)
Q Consensus 252 ~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p 331 (340)
..|.++++++|+ +...++.+|.++...|++++|+..|+++++++|+++.+|+.+|.++..+|+|++|+.+|+++++++|
T Consensus 5 ~~l~~al~~~p~-~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 83 (142)
T 2xcb_A 5 GTLAMLRGLSED-TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDI 83 (142)
T ss_dssp ----CCTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hhHHHHHcCCHH-HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 467889999999 8888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccc
Q 019495 332 KKNSTA 337 (340)
Q Consensus 332 ~~~~~~ 337 (340)
++..++
T Consensus 84 ~~~~~~ 89 (142)
T 2xcb_A 84 NEPRFP 89 (142)
T ss_dssp TCTHHH
T ss_pred CCcHHH
Confidence 987653
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1.2e-11 Score=104.98 Aligned_cols=105 Identities=12% Similarity=-0.025 Sum_probs=98.4
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 309 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 309 (340)
.+..+...|..++..|++++|++.|+++++.+|. ...++..+|.+|...|++++|++.++++++++|++..+++.+|.+
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 114 (252)
T 2ho1_A 36 ARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPS-SADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGF 114 (252)
T ss_dssp HHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHH
Confidence 3677889999999999999999999999999999 889999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHhhhc--ccccccc
Q 019495 310 LSAMGMENEAQVALKEGTT--LEAKKNS 335 (340)
Q Consensus 310 ~~~~~~~~~A~~~~~~al~--l~p~~~~ 335 (340)
+..+|++++|++.|+++++ .+|.+..
T Consensus 115 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~ 142 (252)
T 2ho1_A 115 LYEQKRYEEAYQRLLEASQDTLYPERSR 142 (252)
T ss_dssp HHHTTCHHHHHHHHHHHTTCTTCTTHHH
T ss_pred HHHHhHHHHHHHHHHHHHhCccCcccHH
Confidence 9999999999999999999 6665543
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1.8e-11 Score=112.87 Aligned_cols=105 Identities=14% Similarity=0.109 Sum_probs=96.8
Q ss_pred HHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcch----HHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHH
Q 019495 232 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP----TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 307 (340)
Q Consensus 232 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 307 (340)
......|..++..|++++|+..|+++++..|+ ++ .++..+|.++...|++++|+..++++++++|+++.+|+.+|
T Consensus 258 ~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~ 336 (450)
T 2y4t_A 258 NKLIESAEELIRDGRYTDATSKYESVMKTEPS-IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRA 336 (450)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHH
Confidence 34456699999999999999999999999999 53 47888999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 308 AALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 308 ~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
.++..+|++++|+..|+++++++|++..++
T Consensus 337 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 366 (450)
T 2y4t_A 337 EAYLIEEMYDEAIQDYETAQEHNENDQQIR 366 (450)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTSSSCHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcchHHHH
Confidence 999999999999999999999999987653
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=1.7e-11 Score=117.11 Aligned_cols=106 Identities=14% Similarity=0.010 Sum_probs=100.9
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
...+...|..++..|+|++|++.|+++++++|+ +..++.++|.+|...|++++|++.++++++++|++..+++++|.+|
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 101 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLALHPG-HPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHAL 101 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 457788999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHhhhcccccccccc
Q 019495 311 SAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
..+|++++|++.|+++++++|++..++
T Consensus 102 ~~~g~~~~A~~~~~~al~~~p~~~~~~ 128 (568)
T 2vsy_A 102 EDAGQAEAAAAAYTRAHQLLPEEPYIT 128 (568)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999876543
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.28 E-value=7.3e-12 Score=95.31 Aligned_cols=72 Identities=8% Similarity=-0.133 Sum_probs=67.9
Q ss_pred chHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhccccccccc
Q 019495 265 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
.+..+.++|.++.+.|+|++|++.|++|++++|+++.+|+++|.+|..+|+|++|+++|+++++++|++...
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 78 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRAD 78 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchh
Confidence 456788899999999999999999999999999999999999999999999999999999999999987643
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.28 E-value=2.4e-11 Score=100.72 Aligned_cols=106 Identities=8% Similarity=-0.015 Sum_probs=97.6
Q ss_pred HHHHHHHHHhHHhhh-cCHHHHHHHHHHHHh--cCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQ-KDLKDAIECYTQFID--AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 306 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~-~~~~~A~~~~~~al~--~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 306 (340)
....+...|..++.. |++++|+..|+++++ ..|. ...++..+|.++...|++++|+..++++++.+|++..+++.+
T Consensus 75 ~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 153 (225)
T 2vq2_A 75 SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPT-PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKEL 153 (225)
T ss_dssp CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHH
Confidence 345678889999999 999999999999999 6666 678899999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHhhhcccc-ccccc
Q 019495 307 AAALSAMGMENEAQVALKEGTTLEA-KKNST 336 (340)
Q Consensus 307 g~~~~~~~~~~~A~~~~~~al~l~p-~~~~~ 336 (340)
|.++..+|++++|+..|+++++++| .+..+
T Consensus 154 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 184 (225)
T 2vq2_A 154 ARTKMLAGQLGDADYYFKKYQSRVEVLQADD 184 (225)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHCSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCCHHH
Confidence 9999999999999999999999999 66543
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.7e-11 Score=107.11 Aligned_cols=108 Identities=14% Similarity=-0.048 Sum_probs=92.7
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhH--HHHHhcCChHHHHHHHHHHhhhCCCchHHHHHH
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRS--LCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 306 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~--~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 306 (340)
.+...+...|..+.+.|++++|++.|+++++.+|+ ........+ ..+...|++++|+..|+++++.+|+++.+++++
T Consensus 128 ~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~-~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~l 206 (291)
T 3mkr_A 128 DSLECMAMTVQILLKLDRLDLARKELKKMQDQDED-ATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQ 206 (291)
T ss_dssp CSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 34557788899999999999999999999999998 543322222 333445899999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 307 AAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 307 g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
|.++..+|++++|++.|+++++++|++..++
T Consensus 207 a~~~~~~g~~~eA~~~l~~al~~~p~~~~~l 237 (291)
T 3mkr_A 207 AACHMAQGRWEAAEGVLQEALDKDSGHPETL 237 (291)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999999999988664
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.28 E-value=1.9e-11 Score=107.38 Aligned_cols=101 Identities=15% Similarity=0.115 Sum_probs=97.4
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
...+...|..+...|++++|++.|+++++.+|+ +..++..+|.++...|++++|+..++++++++|++..+++.+|.++
T Consensus 172 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~ 250 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNYDSAAANLRRAVELRPD-DAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSY 250 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 456788899999999999999999999999999 8899999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHhhhccccc
Q 019495 311 SAMGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~ 332 (340)
..+|++++|+..|+++++++|+
T Consensus 251 ~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 251 SNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHhccHHHHHHHHHHHHHhCCc
Confidence 9999999999999999999998
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.26 E-value=1.9e-11 Score=106.81 Aligned_cols=107 Identities=8% Similarity=-0.187 Sum_probs=95.3
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCc-----chHHhhhhHHHHHhc-CChHHHHHHHHHHhhhCCCc---
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMS-DMPQDALNDAMQAQIISPIW--- 299 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~-~~~~~A~~~~~~al~~~p~~--- 299 (340)
..+..+.+.|..+...|+|++|+.+|++|+++.+.. ....+.++|.+|... |++++|+..|++|+++.|..
T Consensus 75 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~ 154 (292)
T 1qqe_A 75 EAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSV 154 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCCh
Confidence 346678899999999999999999999999987652 146788999999996 99999999999999998865
Q ss_pred ---hHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccc
Q 019495 300 ---HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 335 (340)
Q Consensus 300 ---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~ 335 (340)
..+++++|.++..+|+|++|+.+|+++++++|++..
T Consensus 155 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 193 (292)
T 1qqe_A 155 ALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCc
Confidence 577999999999999999999999999999998754
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.26 E-value=2.6e-11 Score=106.58 Aligned_cols=104 Identities=11% Similarity=0.023 Sum_probs=95.6
Q ss_pred HHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcC-ChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 232 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD-MPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 232 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
..+...+..++..|++++|+..++++++.+|+ ++..+..+|.++...| ++++|+..++++++++|++..+|+.+|.++
T Consensus 57 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~ 135 (330)
T 3hym_B 57 SCLPVHIGTLVELNKANELFYLSHKLVDLYPS-NPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSF 135 (330)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-STHHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhhhHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 45567888899999999999999999999999 8889999999999999 999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHhhhccccccccc
Q 019495 311 SAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
..+|++++|+..|+++++++|++..+
T Consensus 136 ~~~~~~~~A~~~~~~a~~~~~~~~~~ 161 (330)
T 3hym_B 136 AVESEHDQAMAAYFTAAQLMKGCHLP 161 (330)
T ss_dssp HHHTCHHHHHHHHHHHHHHTTTCSHH
T ss_pred HHccCHHHHHHHHHHHHHhccccHHH
Confidence 99999999999999999999987654
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.25 E-value=3e-11 Score=107.82 Aligned_cols=98 Identities=11% Similarity=-0.003 Sum_probs=91.7
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
...+...|..++..|+|++|+..|+++|+++|+ +..+++++|.+|..+|++++|+.+|++|++++|++..+++.+|.++
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~ 274 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQ 274 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 467889999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHH-HHHHHhhhcc
Q 019495 311 SAMGMENEA-QVALKEGTTL 329 (340)
Q Consensus 311 ~~~~~~~~A-~~~~~~al~l 329 (340)
..+|++++| ...|++.+..
T Consensus 275 ~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 275 QRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 999999999 5567777654
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.24 E-value=2.8e-11 Score=101.46 Aligned_cols=102 Identities=15% Similarity=0.050 Sum_probs=89.5
Q ss_pred HHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcch---HHhhhhHHHHHh------------------cCChHHHHHHHH
Q 019495 232 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP---TVYARRSLCYLM------------------SDMPQDALNDAM 290 (340)
Q Consensus 232 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~---~~~~~~~~~~~~------------------~~~~~~A~~~~~ 290 (340)
..++..|..++..|+|++|+..|+++++..|+ +. .+++.+|.++.. .|++++|+..|+
T Consensus 42 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~-~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 120 (225)
T 2yhc_A 42 QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPT-HPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFS 120 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHH
Confidence 46788899999999999999999999999998 44 367778888876 578999999999
Q ss_pred HHhhhCCCchHHH-----------------HHHHHHHHHcCChHHHHHHHHhhhccccccc
Q 019495 291 QAQIISPIWHIAS-----------------YLQAAALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 291 ~al~~~p~~~~a~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
++++.+|++..++ +.+|.+|...|+|++|+..|+++++..|+++
T Consensus 121 ~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~ 181 (225)
T 2yhc_A 121 KLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQ 181 (225)
T ss_dssp HHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSH
T ss_pred HHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCC
Confidence 9999999987665 6789999999999999999999999999865
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.24 E-value=1e-11 Score=116.20 Aligned_cols=106 Identities=15% Similarity=0.046 Sum_probs=94.7
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH-
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA- 309 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~- 309 (340)
...+...|..++..|+|++|++.|+++++++|+ +..++.++|.+|..+|++++|++.+++|++++|++..+++.+|.+
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~ 118 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECN 118 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 567889999999999999999999999999999 889999999999999999999999999999999999999999998
Q ss_pred -HHHcCChHHHHHHHH-----------hhhcccccccccc
Q 019495 310 -LSAMGMENEAQVALK-----------EGTTLEAKKNSTA 337 (340)
Q Consensus 310 -~~~~~~~~~A~~~~~-----------~al~l~p~~~~~~ 337 (340)
+..+|++++|++.++ ++++++|+...++
T Consensus 119 ~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~~~~ 158 (477)
T 1wao_1 119 KIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGPK 158 (477)
T ss_dssp HHHHHHHHCCC------CCSTTTCCTTSSCCCCTTCCSCC
T ss_pred HHHHHHHHHHHhccccccchhHhhhhhhhccccccccccc
Confidence 899999999999999 9999998866553
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.4e-10 Score=101.54 Aligned_cols=109 Identities=10% Similarity=0.019 Sum_probs=100.7
Q ss_pred HHHHHHHHHHhHHhhhc--CHHHHHHHHHHHHhcCCCcchHHhhhhHHHH----Hhc---CChHHHHHHHHHHhhhCCCc
Q 019495 229 QETLNSKKKGDVAFRQK--DLKDAIECYTQFIDAGTMVSPTVYARRSLCY----LMS---DMPQDALNDAMQAQIISPIW 299 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~--~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~----~~~---~~~~~A~~~~~~al~~~p~~ 299 (340)
.....+..++..+...+ ++++|++.++.+|..+|. +..+|+.|+.++ ..+ ++++++++.++++++.+|.+
T Consensus 65 ~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk-~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkn 143 (306)
T 3dra_A 65 SHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEK-NYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKN 143 (306)
T ss_dssp TCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTT-CCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCC
Confidence 44457788888888888 999999999999999999 899999999998 666 78999999999999999999
Q ss_pred hHHHHHHHHHHHHcCChH--HHHHHHHhhhccccccccccC
Q 019495 300 HIASYLQAAALSAMGMEN--EAQVALKEGTTLEAKKNSTAG 338 (340)
Q Consensus 300 ~~a~~~~g~~~~~~~~~~--~A~~~~~~al~l~p~~~~~~~ 338 (340)
..+|+.++.++..+|+++ ++++.++++++.||.|..||.
T Consensus 144 y~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~ 184 (306)
T 3dra_A 144 HHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWS 184 (306)
T ss_dssp HHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHH
Confidence 999999999999999999 999999999999999998884
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.23 E-value=6.7e-11 Score=93.28 Aligned_cols=101 Identities=13% Similarity=0.007 Sum_probs=91.3
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHH--HH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ--AA 308 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~--g~ 308 (340)
...+...|..++..|+|++|+..|+++++.+|+ +..++.++|.++...|++++|++.++++++++|++..++..+ +.
T Consensus 47 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~ 125 (166)
T 1a17_A 47 AIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECN 125 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 456788899999999999999999999999999 889999999999999999999999999999999999988554 55
Q ss_pred HHHHcCChHHHHHHHHhhhccccc
Q 019495 309 ALSAMGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 309 ~~~~~~~~~~A~~~~~~al~l~p~ 332 (340)
.+..+|++++|++.+.++.++-+.
T Consensus 126 ~~~~~~~~~~A~~~~~~~~~~~~~ 149 (166)
T 1a17_A 126 KIVKQKAFERAIAGDEHKRSVVDS 149 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccchHHHhcc
Confidence 588999999999999998776544
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.21 E-value=2.1e-11 Score=104.49 Aligned_cols=99 Identities=16% Similarity=0.034 Sum_probs=89.8
Q ss_pred HhHHhhhcCHHHHHHHHHHHHhcC----CCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHc
Q 019495 238 GDVAFRQKDLKDAIECYTQFIDAG----TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAM 313 (340)
Q Consensus 238 a~~~~~~~~~~~A~~~~~~al~~~----p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~ 313 (340)
+......|+|++|+..|+++++.. |. ....+..+|.+|...|++++|+..++++++++|+++.+++.+|.++..+
T Consensus 12 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~ 90 (275)
T 1xnf_A 12 AVPLQPTLQQEVILARMEQILASRALTDDE-RAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQA 90 (275)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHTSSCCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHT
T ss_pred eeccCccchHHHHHHHHHHHHhcccccCch-hHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHc
Confidence 344556799999999999999984 34 6788999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHhhhcccccccccc
Q 019495 314 GMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 314 ~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
|++++|+..|+++++++|++..++
T Consensus 91 ~~~~~A~~~~~~al~~~~~~~~~~ 114 (275)
T 1xnf_A 91 GNFDAAYEAFDSVLELDPTYNYAH 114 (275)
T ss_dssp TCHHHHHHHHHHHHHHCTTCTHHH
T ss_pred cCHHHHHHHHHHHHhcCccccHHH
Confidence 999999999999999999877553
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.19 E-value=1.1e-10 Score=110.02 Aligned_cols=106 Identities=13% Similarity=0.059 Sum_probs=90.6
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
...+...|..++..|++++|++.|+++++.+|+ +...+..+|.+|...|++++|+..++++++.+|+++.+++.+|.++
T Consensus 310 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (537)
T 3fp2_A 310 PPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPE-NVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEIL 388 (537)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 445677888888888888888888888888888 7788888888888888888888888888888888888888888888
Q ss_pred HHcCChHHHHHHHHhhhcccccccccc
Q 019495 311 SAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
..+|++++|+..|+++++++|++..++
T Consensus 389 ~~~g~~~~A~~~~~~a~~~~~~~~~~~ 415 (537)
T 3fp2_A 389 TDRGDFDTAIKQYDIAKRLEEVQEKIH 415 (537)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHCSSCS
T ss_pred HHhCCHHHHHHHHHHHHHcCCcchhhH
Confidence 888888888888888888888876654
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.19 E-value=4.5e-11 Score=84.43 Aligned_cols=77 Identities=16% Similarity=0.067 Sum_probs=69.7
Q ss_pred CCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 261 GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 261 ~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
+|......+..+|.++...|++++|+..++++++++|++..+++.+|.++..+|++++|+..|+++++++|++..++
T Consensus 4 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 80 (91)
T 1na3_A 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAK 80 (91)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred cccccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHH
Confidence 34325678889999999999999999999999999999999999999999999999999999999999999887654
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.18 E-value=3.7e-11 Score=90.79 Aligned_cols=73 Identities=12% Similarity=-0.062 Sum_probs=68.9
Q ss_pred chHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 265 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
.+..+..+|.++...|++++|+..|+++++++|+++.+|+++|.++..+|+|++|+.+|+++++++|++..++
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 75 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAY 75 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHH
Confidence 4677888999999999999999999999999999999999999999999999999999999999999987654
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.3e-10 Score=111.20 Aligned_cols=107 Identities=17% Similarity=0.122 Sum_probs=88.5
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhc------CCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDA------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 304 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 304 (340)
...+...|..+...|++++|++.|+++++. +|+....+|..++.+|.+.|++++|++.++++++++|++..+|+
T Consensus 475 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~ 554 (597)
T 2xpi_A 475 PLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHT 554 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHH
T ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHH
Confidence 345667788888888888888888888887 55522577888888888889999999999999988888888899
Q ss_pred HHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 305 LQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 305 ~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
.+|.+|...|++++|++.|+++++++|++..++
T Consensus 555 ~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~ 587 (597)
T 2xpi_A 555 AIALVYLHKKIPGLAITHLHESLAISPNEIMAS 587 (597)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHH
Confidence 899999999999999999999999988876553
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.17 E-value=2.5e-11 Score=108.41 Aligned_cols=103 Identities=13% Similarity=0.006 Sum_probs=59.0
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH-HH
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA-LS 311 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~-~~ 311 (340)
.+...|..++..|+|++|+..|+++|+++|+ +..+++++|.+|..+|++++|+.+|+++++++|++..++..++.+ ..
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~ 310 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTEEEK-NPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQ 310 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC------------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 6788999999999999999999999999999 889999999999999999999999999999999999999999988 55
Q ss_pred HcCChHHHHHHHHhhhccccccccc
Q 019495 312 AMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 312 ~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
..+.++++...|+++++.+|++...
T Consensus 311 ~~~~~~~a~~~~~~~l~~~p~~~~~ 335 (338)
T 2if4_A 311 EKALYQKQKEMYKGIFKGKDEGGAK 335 (338)
T ss_dssp -------------------------
T ss_pred HHHHHHHHHHHHHHhhCCCCCCCCC
Confidence 6678899999999999999987654
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.17 E-value=9.3e-11 Score=108.87 Aligned_cols=98 Identities=9% Similarity=0.013 Sum_probs=44.7
Q ss_pred HHHhHHhhhcCHHHHHHHHHHHHhc---------CCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhC--------CC
Q 019495 236 KKGDVAFRQKDLKDAIECYTQFIDA---------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS--------PI 298 (340)
Q Consensus 236 ~~a~~~~~~~~~~~A~~~~~~al~~---------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~--------p~ 298 (340)
..|..++.+|+|++|++.|++|+++ +|. ....|.++|.+|..+|++++|+.++++++++. +.
T Consensus 56 ~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~-~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~ 134 (472)
T 4g1t_A 56 LLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIR-SLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIE 134 (472)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTT-THHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchH-HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchh
Confidence 3444444555555555555555443 222 33344444555555555555555555544442 22
Q ss_pred chHHHHHHHHHHHHc--CChHHHHHHHHhhhccccccc
Q 019495 299 WHIASYLQAAALSAM--GMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 299 ~~~a~~~~g~~~~~~--~~~~~A~~~~~~al~l~p~~~ 334 (340)
.+..+..+|.++... ++|++|+++|++|++++|+++
T Consensus 135 ~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~ 172 (472)
T 4g1t_A 135 SPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNP 172 (472)
T ss_dssp CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCH
T ss_pred hHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCH
Confidence 334444444444332 234455555555555555443
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=1.4e-10 Score=110.47 Aligned_cols=107 Identities=7% Similarity=-0.118 Sum_probs=98.6
Q ss_pred HHHHHHHHhHHhhhcC----------HHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcC--ChHHHHHHHHHHhhhCCC
Q 019495 231 TLNSKKKGDVAFRQKD----------LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD--MPQDALNDAMQAQIISPI 298 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~----------~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~--~~~~A~~~~~~al~~~p~ 298 (340)
...|..++......|+ +++|++.++++++.+|. ++.+|..|+.++..++ ++++|++.++++++++|.
T Consensus 63 ~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK-~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~ 141 (567)
T 1dce_A 63 ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEADER 141 (567)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccc
Confidence 3456666666766676 99999999999999999 9999999999999999 669999999999999999
Q ss_pred chHHHHHHHHHHHHcC-ChHHHHHHHHhhhccccccccccC
Q 019495 299 WHIASYLQAAALSAMG-MENEAQVALKEGTTLEAKKNSTAG 338 (340)
Q Consensus 299 ~~~a~~~~g~~~~~~~-~~~~A~~~~~~al~l~p~~~~~~~ 338 (340)
+..||+.+|.++..+| .+++|+++++++++++|.+..||.
T Consensus 142 N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~ 182 (567)
T 1dce_A 142 NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWH 182 (567)
T ss_dssp CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHH
T ss_pred cccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHH
Confidence 9999999999999999 999999999999999999999884
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.1e-10 Score=85.69 Aligned_cols=69 Identities=13% Similarity=0.051 Sum_probs=66.3
Q ss_pred chHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccc
Q 019495 265 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 333 (340)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 333 (340)
+...+..+|.++...|++++|++.|+++++++|+++.+++++|.++..+|++++|++.|+++++++|++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 456788899999999999999999999999999999999999999999999999999999999999997
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.15 E-value=5.7e-10 Score=84.28 Aligned_cols=85 Identities=9% Similarity=-0.037 Sum_probs=80.3
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 309 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 309 (340)
+...+...|..++..|++++|+..|+++++.+|+ +..++.++|.++...|++++|+..++++++++|++..+++.+|.+
T Consensus 49 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~ 127 (133)
T 2lni_A 49 DAKLYSNRAACYTKLLEFQLALKDCEECIQLEPT-FIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRC 127 (133)
T ss_dssp CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHH
Confidence 4567889999999999999999999999999999 889999999999999999999999999999999999999999999
Q ss_pred HHHcCC
Q 019495 310 LSAMGM 315 (340)
Q Consensus 310 ~~~~~~ 315 (340)
+..+|+
T Consensus 128 ~~~~~~ 133 (133)
T 2lni_A 128 MMAQYN 133 (133)
T ss_dssp HHHHTC
T ss_pred HHHhcC
Confidence 998774
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.15 E-value=5.5e-11 Score=92.98 Aligned_cols=72 Identities=15% Similarity=0.030 Sum_probs=66.5
Q ss_pred hHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCC-------chH-----HHHHHHHHHHHcCChHHHHHHHHhhhcc----
Q 019495 266 PTVYARRSLCYLMSDMPQDALNDAMQAQIISPI-------WHI-----ASYLQAAALSAMGMENEAQVALKEGTTL---- 329 (340)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-------~~~-----a~~~~g~~~~~~~~~~~A~~~~~~al~l---- 329 (340)
...+.+.|..+.+.|+|++|+..|++||+++|+ +.. +|+++|.++..+|+|++|+.+|++||++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 355677899999999999999999999999999 444 9999999999999999999999999999
Q ss_pred ---cccccccc
Q 019495 330 ---EAKKNSTA 337 (340)
Q Consensus 330 ---~p~~~~~~ 337 (340)
+|++..+|
T Consensus 91 ~e~~pd~~~A~ 101 (159)
T 2hr2_A 91 GELNQDEGKLW 101 (159)
T ss_dssp CCTTSTHHHHH
T ss_pred ccCCCchHHHH
Confidence 99988877
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.14 E-value=6.6e-11 Score=89.16 Aligned_cols=71 Identities=14% Similarity=-0.028 Sum_probs=66.5
Q ss_pred HHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 267 TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
..++.+|.++...|++++|+..++++++++|+++.+|+.+|.++..+|++++|+.+|+++++++|++..++
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 88 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVH 88 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 34667899999999999999999999999999999999999999999999999999999999999987654
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=99.13 E-value=2.8e-10 Score=99.69 Aligned_cols=97 Identities=8% Similarity=-0.103 Sum_probs=89.3
Q ss_pred HhhhcCH-HHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcC--ChHHHHHHHHHHhhhCCCchHHHHHHHHHH----HHc
Q 019495 241 AFRQKDL-KDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD--MPQDALNDAMQAQIISPIWHIASYLQAAAL----SAM 313 (340)
Q Consensus 241 ~~~~~~~-~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~--~~~~A~~~~~~al~~~p~~~~a~~~~g~~~----~~~ 313 (340)
..+.|.+ ++|+..++++|+++|+ ..++|+.++.++..++ +++++++.++++|+.+|++..+|+.++.++ ..+
T Consensus 42 ~~~~~e~s~~aL~~t~~~L~~nP~-~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l 120 (306)
T 3dra_A 42 LMKAEEYSERALHITELGINELAS-HYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELN 120 (306)
T ss_dssp HHHTTCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHcCCCCHHHHHHHHHHHHHCcH-HHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhc
Confidence 3344444 6899999999999999 8999999999999999 999999999999999999999999999999 777
Q ss_pred ---CChHHHHHHHHhhhccccccccccC
Q 019495 314 ---GMENEAQVALKEGTTLEAKKNSTAG 338 (340)
Q Consensus 314 ---~~~~~A~~~~~~al~l~p~~~~~~~ 338 (340)
++++++++.++++++++|++..+|.
T Consensus 121 ~~~~~~~~EL~~~~~~l~~~pkny~aW~ 148 (306)
T 3dra_A 121 NNDFDPYREFDILEAMLSSDPKNHHVWS 148 (306)
T ss_dssp TTCCCTHHHHHHHHHHHHHCTTCHHHHH
T ss_pred cccCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 8999999999999999999988873
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.13 E-value=1.1e-10 Score=109.30 Aligned_cols=105 Identities=13% Similarity=0.020 Sum_probs=94.4
Q ss_pred HHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchH------HhhhhHHHHHh---cCChHHHHHHHHHHhhhCCCchHH
Q 019495 232 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT------VYARRSLCYLM---SDMPQDALNDAMQAQIISPIWHIA 302 (340)
Q Consensus 232 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~------~~~~~~~~~~~---~~~~~~A~~~~~~al~~~p~~~~a 302 (340)
..+...|..++..|++++|+..|+++++.+|+ +.. .+..+|.++.. .|++++|+..++++++++|++..+
T Consensus 373 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 451 (514)
T 2gw1_A 373 EVPNFFAEILTDKNDFDKALKQYDLAIELENK-LDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQA 451 (514)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT-SSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHH
Confidence 45677888999999999999999999999888 543 88889999999 999999999999999999999999
Q ss_pred HHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 303 SYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 303 ~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
++.+|.++..+|++++|+..|+++++++|++..++
T Consensus 452 ~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 486 (514)
T 2gw1_A 452 KIGLAQMKLQQEDIDEAITLFEESADLARTMEEKL 486 (514)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHH
Confidence 99999999999999999999999999999877654
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.12 E-value=2.5e-10 Score=100.36 Aligned_cols=105 Identities=11% Similarity=-0.043 Sum_probs=68.8
Q ss_pred HHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchH-HhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 232 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT-VYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 232 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~-~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
..+...|..+...|++++|.+.|++++++.|. ++. +|.+++.++...|++++|++.|++|++.+|....+|...|...
T Consensus 100 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~ 178 (308)
T 2ond_A 100 LLYFAYADYEESRMKYEKVHSIYNRLLAIEDI-DPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALME 178 (308)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSS-CTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 35556666666667777777777777777666 444 6666677666677777777777777777776666666555443
Q ss_pred HH-cCChHHHHHHHHhhhcccccccccc
Q 019495 311 SA-MGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 311 ~~-~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
.. +|++++|+..|++|++++|++..+|
T Consensus 179 ~~~~~~~~~A~~~~~~al~~~p~~~~~~ 206 (308)
T 2ond_A 179 YYCSKDKSVAFKIFELGLKKYGDIPEYV 206 (308)
T ss_dssp HHTSCCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHH
Confidence 32 5777777777777777777665443
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.12 E-value=1.8e-10 Score=98.71 Aligned_cols=104 Identities=12% Similarity=-0.035 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhc--------CCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhh----
Q 019495 228 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII---- 295 (340)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~---- 295 (340)
......+...|..++..|++++|++.|+++++. +|. ...++.++|.+|...|++++|+..+++++++
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 160 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPD-VAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATR 160 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 345668889999999999999999999999988 456 6788999999999999999999999999999
Q ss_pred ----CCCchHHHHHHHHHHHHcCChHHHHHHHHhhhccccc
Q 019495 296 ----SPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 296 ----~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 332 (340)
+|....+++.+|.++..+|++++|+..|++++++.++
T Consensus 161 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 161 LGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 8888999999999999999999999999999998665
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.12 E-value=1.3e-10 Score=99.51 Aligned_cols=101 Identities=12% Similarity=-0.029 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcC--------CCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhh----
Q 019495 228 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAG--------TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII---- 295 (340)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~---- 295 (340)
......+...|..++..|+|++|+..|++++++. |. ....+.++|.+|...|++++|++.+++++++
T Consensus 40 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 118 (283)
T 3edt_B 40 PDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKV 118 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchH-HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 3456788899999999999999999999999873 44 6778899999999999999999999999998
Q ss_pred ----CCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcc
Q 019495 296 ----SPIWHIASYLQAAALSAMGMENEAQVALKEGTTL 329 (340)
Q Consensus 296 ----~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 329 (340)
+|....+++++|.++..+|++++|+..|++++++
T Consensus 119 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 119 LGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 5888999999999999999999999999999998
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.12 E-value=2.7e-10 Score=100.13 Aligned_cols=99 Identities=13% Similarity=-0.020 Sum_probs=89.2
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHH-hcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHH
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYL-MSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 311 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 311 (340)
.+...|..+...|++++|+..|+++++.+|. ...+|...+.... ..|++++|++.|+++++++|+++.+|..+|.++.
T Consensus 136 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~-~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 214 (308)
T 2ond_A 136 VYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 214 (308)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 6788899999999999999999999999998 7777776555543 3799999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHhhhcc---ccc
Q 019495 312 AMGMENEAQVALKEGTTL---EAK 332 (340)
Q Consensus 312 ~~~~~~~A~~~~~~al~l---~p~ 332 (340)
.+|++++|+..|++|++. +|+
T Consensus 215 ~~g~~~~A~~~~~~al~~~~l~p~ 238 (308)
T 2ond_A 215 HLNEDNNTRVLFERVLTSGSLPPE 238 (308)
T ss_dssp TTCCHHHHHHHHHHHHHSSSSCGG
T ss_pred HCCCHHHHHHHHHHHHhccCCCHH
Confidence 999999999999999995 564
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.12 E-value=1.7e-10 Score=84.38 Aligned_cols=76 Identities=11% Similarity=0.000 Sum_probs=70.9
Q ss_pred cCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhccccc--cccc
Q 019495 260 AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK--KNST 336 (340)
Q Consensus 260 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~--~~~~ 336 (340)
++|+ +...+..+|.++...|++++|+..++++++++|++..+++.+|.++..+|++++|+..|+++++++|+ +..+
T Consensus 1 l~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 78 (112)
T 2kck_A 1 MVDQ-NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDV 78 (112)
T ss_dssp CCCS-STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHH
T ss_pred CCCC-cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHH
Confidence 3677 77889999999999999999999999999999999999999999999999999999999999999998 6543
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.11 E-value=2.1e-10 Score=100.92 Aligned_cols=106 Identities=11% Similarity=0.010 Sum_probs=92.0
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCc-----chHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCc----
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---- 299 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---- 299 (340)
..+..+...|..+.. |+|++|+..|++++++.+.. ...++.++|.+|..+|+|++|+..|++++++.|++
T Consensus 114 ~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 192 (307)
T 2ifu_A 114 TAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYP 192 (307)
T ss_dssp HHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChh
Confidence 345677888999988 99999999999999987652 25678899999999999999999999999987654
Q ss_pred --hHHHHHHHHHHHHcCChHHHHHHHHhhhccccccccc
Q 019495 300 --HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 300 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
..+++.+|.++..+|++++|+.+|++++ ++|....+
T Consensus 193 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~~ 230 (307)
T 2ifu_A 193 TCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFSGS 230 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTTS
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCCC
Confidence 3478889999999999999999999999 99986543
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.11 E-value=1.5e-10 Score=83.46 Aligned_cols=69 Identities=14% Similarity=0.080 Sum_probs=65.0
Q ss_pred hhhhHHHHHhcCChHHHHHHHHHHhhhCCCchH-HHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 269 YARRSLCYLMSDMPQDALNDAMQAQIISPIWHI-ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 269 ~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~-a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
.+++|.++...|++++|++.++++++.+|+++. +++.+|.++..+|++++|+++|+++++++|++..++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 356799999999999999999999999999999 999999999999999999999999999999987664
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.10 E-value=5.9e-10 Score=83.71 Aligned_cols=86 Identities=10% Similarity=-0.017 Sum_probs=81.2
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
...+...|..++..|++++|+..|+++++.+|+ +...+..+|.++...|++++|+..++++++++|++..+++.+|.++
T Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~ 124 (131)
T 2vyi_A 46 AVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA-YSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAE 124 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHhcCcc-CHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHH
Confidence 456788899999999999999999999999999 8899999999999999999999999999999999999999999999
Q ss_pred HHcCChH
Q 019495 311 SAMGMEN 317 (340)
Q Consensus 311 ~~~~~~~ 317 (340)
..+|+++
T Consensus 125 ~~~~~~~ 131 (131)
T 2vyi_A 125 LKLREAP 131 (131)
T ss_dssp HHHTTCC
T ss_pred HHHhcCC
Confidence 9999874
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.10 E-value=2.5e-10 Score=99.32 Aligned_cols=104 Identities=11% Similarity=0.009 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhc--------CCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhh----
Q 019495 228 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII---- 295 (340)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~---- 295 (340)
......+...|..++..|++++|++.|+++++. .|. ....+..+|.+|...|++++|++.+++++++
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 228 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPN-VAKTKNNLASCYLKQGKFKQAETLYKEILTRAHER 228 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHH-HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 445567888999999999999999999999998 566 6778889999999999999999999999984
Q ss_pred ---------------------------------------------CCCchHHHHHHHHHHHHcCChHHHHHHHHhhhccc
Q 019495 296 ---------------------------------------------SPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 330 (340)
Q Consensus 296 ---------------------------------------------~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 330 (340)
+|....+++.+|.+|..+|++++|+++|++++++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~ 308 (311)
T 3nf1_A 229 EFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSR 308 (311)
T ss_dssp HHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 57788999999999999999999999999999998
Q ss_pred cc
Q 019495 331 AK 332 (340)
Q Consensus 331 p~ 332 (340)
|+
T Consensus 309 ~~ 310 (311)
T 3nf1_A 309 KQ 310 (311)
T ss_dssp C-
T ss_pred hc
Confidence 86
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.10 E-value=1.9e-10 Score=88.75 Aligned_cols=93 Identities=12% Similarity=0.004 Sum_probs=84.2
Q ss_pred hcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcC---ChHHHHHHHHHHhhhC-C-CchHHHHHHHHHHHHcCChHH
Q 019495 244 QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD---MPQDALNDAMQAQIIS-P-IWHIASYLQAAALSAMGMENE 318 (340)
Q Consensus 244 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~al~~~-p-~~~~a~~~~g~~~~~~~~~~~ 318 (340)
......+.+.|.+.++.++. +....+++|.++.+.+ ++++|+..+++.++.+ | +..+++|++|.+++.+|+|++
T Consensus 11 ~~~l~~~~~~y~~e~~~~~~-~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~ 89 (152)
T 1pc2_A 11 VEDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEK 89 (152)
T ss_dssp HHHHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHHHHHccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHH
Confidence 34567788889999998887 8899999999999988 7779999999999999 8 679999999999999999999
Q ss_pred HHHHHHhhhcccccccccc
Q 019495 319 AQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 319 A~~~~~~al~l~p~~~~~~ 337 (340)
|..+++++|+++|+|.+|.
T Consensus 90 A~~y~~~lL~ieP~n~QA~ 108 (152)
T 1pc2_A 90 ALKYVRGLLQTEPQNNQAK 108 (152)
T ss_dssp HHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHhcCCCCHHHH
Confidence 9999999999999988764
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=7.5e-10 Score=98.11 Aligned_cols=109 Identities=13% Similarity=0.002 Sum_probs=97.7
Q ss_pred HHHHHHHHHHhHHhhhc-CHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhc-C-ChHHHHHHHHHHhhhCCCchHHHHH
Q 019495 229 QETLNSKKKGDVAFRQK-DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS-D-MPQDALNDAMQAQIISPIWHIASYL 305 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~-~-~~~~A~~~~~~al~~~p~~~~a~~~ 305 (340)
+....+..++......| +++++++.++++|+.+|. +..+|+.|+.++..+ + +++++++.++++++.+|.+..+|+.
T Consensus 86 ~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~ 164 (349)
T 3q7a_A 86 AHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLK-SYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAY 164 (349)
T ss_dssp TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHH
T ss_pred hhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHH
Confidence 44456777788887778 599999999999999999 899999999999888 7 8999999999999999999999999
Q ss_pred HHHHHHHcCChH--------HHHHHHHhhhccccccccccC
Q 019495 306 QAAALSAMGMEN--------EAQVALKEGTTLEAKKNSTAG 338 (340)
Q Consensus 306 ~g~~~~~~~~~~--------~A~~~~~~al~l~p~~~~~~~ 338 (340)
++.++..+|+++ +++++++++++.||.|..||.
T Consensus 165 R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~ 205 (349)
T 3q7a_A 165 LHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWG 205 (349)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHH
Confidence 999999999998 999999999999999988874
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.09 E-value=3e-10 Score=93.00 Aligned_cols=97 Identities=7% Similarity=0.030 Sum_probs=83.4
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
...+...|..++..|+|++|+..|+++++++|+ +..+++++|.+|..+|++++|+..|+++++++|++..++..++.++
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 166 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCV 166 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHH
Confidence 456788999999999999999999999999999 8899999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHH-HHHHhhhc
Q 019495 311 SAMGMENEAQ-VALKEGTT 328 (340)
Q Consensus 311 ~~~~~~~~A~-~~~~~al~ 328 (340)
..+++++++. ..|++.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~f~ 185 (198)
T 2fbn_A 167 NKLKEARKKDKLTFGGMFD 185 (198)
T ss_dssp HHHHHHHC-----------
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999988 44555543
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.09 E-value=3.1e-10 Score=105.57 Aligned_cols=91 Identities=13% Similarity=0.097 Sum_probs=82.9
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
...+.+.|..++..|+|++|+..|+++|+++|+ +..+++++|.+|..+|++++|+.+|++|++++|++..+++.+|.++
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~ 395 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQ 395 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 457789999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHH
Q 019495 311 SAMGMENEAQVA 322 (340)
Q Consensus 311 ~~~~~~~~A~~~ 322 (340)
..++++++|...
T Consensus 396 ~~~~~~~~a~~~ 407 (457)
T 1kt0_A 396 KKAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.5e-10 Score=107.49 Aligned_cols=105 Identities=9% Similarity=-0.062 Sum_probs=69.5
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcch---HHhhhhHH-HHHhcCChHHHHHHHHHHhhh-------------
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP---TVYARRSL-CYLMSDMPQDALNDAMQAQII------------- 295 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~---~~~~~~~~-~~~~~~~~~~A~~~~~~al~~------------- 295 (340)
.+...|..+...|+|++|++.|+++|+++++ .. .++..++. .+...|++++|+..|++|+++
T Consensus 336 ~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal~i~~~~~~~~~~~~~ 414 (472)
T 4g1t_A 336 VCSILASLHALADQYEEAEYYFQKEFSKELT-PVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKSREKEKMKDK 414 (472)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC-HHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHSCCCCHHHHHHHHH
T ss_pred hhhhHHHHHHHhccHHHHHHHHHHHHhcCCC-ChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCcccHHHHHHHHH
Confidence 4567789999999999999999999999887 33 23444554 456789999999999998876
Q ss_pred -----------CCCchHHHHHHHHHHHHcCChHHHHHHHHhhhccccccccccC
Q 019495 296 -----------SPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 338 (340)
Q Consensus 296 -----------~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 338 (340)
+|+++.+|+.+|.+|..+|++++|+++|++||+++|.++.|..
T Consensus 415 l~~~~~~~l~~~p~~~~~~~~LG~~~~~~g~~~~A~~~y~kALe~~~~~p~a~~ 468 (472)
T 4g1t_A 415 LQKIAKMRLSKNGADSEALHVLAFLQELNEKMQQADEDSERGLESGSLIPSASS 468 (472)
T ss_dssp HHHHHHHHHHHCC-CTTHHHHHHHHHHHHHHCC---------------------
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcHhh
Confidence 5677889999999999999999999999999999999887754
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=2.9e-10 Score=108.33 Aligned_cols=98 Identities=10% Similarity=-0.049 Sum_probs=89.8
Q ss_pred HHhhhcCH-HHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCC----------hHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 240 VAFRQKDL-KDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM----------PQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 240 ~~~~~~~~-~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~----------~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
+..+.|+| ++|++.++++|+++|+ +.++|+.|+.++..+++ +++|++.++++++.+|++..+|+.+|.
T Consensus 37 ~~~~~~~~~eeal~~~~~~l~~nP~-~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w 115 (567)
T 1dce_A 37 QKRQAGELDESVLELTSQILGANPD-FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCW 115 (567)
T ss_dssp HHHHTTCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHHHHHHHCch-hHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 34444544 5789999999999999 89999999999999988 999999999999999999999999999
Q ss_pred HHHHcC--ChHHHHHHHHhhhccccccccccC
Q 019495 309 ALSAMG--MENEAQVALKEGTTLEAKKNSTAG 338 (340)
Q Consensus 309 ~~~~~~--~~~~A~~~~~~al~l~p~~~~~~~ 338 (340)
++..++ ++++|++.+++++++||++..||.
T Consensus 116 ~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~ 147 (567)
T 1dce_A 116 LLSRLPEPNWARELELCARFLEADERNFHCWD 147 (567)
T ss_dssp HHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHcccccHHHHHHHHHHHHhhccccccHHH
Confidence 999999 669999999999999999998874
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.09 E-value=4.2e-10 Score=107.52 Aligned_cols=101 Identities=9% Similarity=-0.006 Sum_probs=59.2
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHH
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 312 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 312 (340)
.+...|..+.+.|++++|++.|+++++.+|. +...|..++.+|.+.|++++|++.|+++++.+|++..+|+.+|.+|..
T Consensus 375 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 453 (597)
T 2xpi_A 375 TWLAVGIYYLCVNKISEARRYFSKSSTMDPQ-FGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQ 453 (597)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence 3444555555566666666666666665555 555555556666666666666666666666555555555556666666
Q ss_pred cCChHHHHHHHHhhhccccccc
Q 019495 313 MGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 313 ~~~~~~A~~~~~~al~l~p~~~ 334 (340)
.|++++|++.|+++++++|.+.
T Consensus 454 ~g~~~~A~~~~~~~~~~~~~~~ 475 (597)
T 2xpi_A 454 LGNILLANEYLQSSYALFQYDP 475 (597)
T ss_dssp HTCHHHHHHHHHHHHHHCCCCH
T ss_pred cCCHHHHHHHHHHHHHhCCCCh
Confidence 6666666666666655555544
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.8e-10 Score=91.35 Aligned_cols=73 Identities=21% Similarity=0.097 Sum_probs=69.4
Q ss_pred chHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 265 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
....+..+|.++...|+|++|+..|+++++++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++..++
T Consensus 10 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 82 (164)
T 3sz7_A 10 ESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAW 82 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 6778899999999999999999999999999999999999999999999999999999999999999987654
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.08 E-value=6.8e-10 Score=82.79 Aligned_cols=76 Identities=3% Similarity=-0.167 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHH
Q 019495 228 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 304 (340)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 304 (340)
......+...|..++..|+|++|+..|+++++++|+ ++.++.++|.++..+|++++|+..++++++.+|+++....
T Consensus 24 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 99 (117)
T 3k9i_A 24 KDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN-HQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQS 99 (117)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHH
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHH
Confidence 456678899999999999999999999999999999 8999999999999999999999999999999999987654
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=99.08 E-value=3.3e-10 Score=98.83 Aligned_cols=103 Identities=15% Similarity=0.115 Sum_probs=88.6
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhc------CCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCc----
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDA------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---- 299 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---- 299 (340)
.+..+...|..++..|+|++|+..|+++++. ++.....++.++|.+|..+|+|++|++.+++|+++.+..
T Consensus 154 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~ 233 (293)
T 3u3w_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMA 233 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHH
Confidence 3456889999999999999999999999952 111145688899999999999999999999999987554
Q ss_pred --hHHHHHHHHHHHHcCC-hHHHHHHHHhhhccccc
Q 019495 300 --HIASYLQAAALSAMGM-ENEAQVALKEGTTLEAK 332 (340)
Q Consensus 300 --~~a~~~~g~~~~~~~~-~~~A~~~~~~al~l~p~ 332 (340)
..+|+++|.++..+|+ +++|+++|++|+++...
T Consensus 234 ~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~ 269 (293)
T 3u3w_A 234 LIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDI 269 (293)
T ss_dssp THHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHH
Confidence 7899999999999995 69999999999988654
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.07 E-value=4.6e-10 Score=87.50 Aligned_cols=100 Identities=12% Similarity=0.109 Sum_probs=65.5
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCc-----chHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCc------hH
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW------HI 301 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------~~ 301 (340)
.+...|..++..|++++|++.|++++++.+.. ....+.++|.++...|++++|+..+++++++.+.. ..
T Consensus 51 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 130 (164)
T 3ro3_A 51 AYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGR 130 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHH
Confidence 45566777777777777777777777654331 13456666777777777777777777777664333 34
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHhhhccccc
Q 019495 302 ASYLQAAALSAMGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 302 a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 332 (340)
+++.+|.++..+|++++|+..+++++++..+
T Consensus 131 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 131 ACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 5666777777777777777777777766543
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=99.06 E-value=3.9e-10 Score=86.10 Aligned_cols=77 Identities=10% Similarity=0.012 Sum_probs=70.7
Q ss_pred cCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 260 AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 260 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
.+|. ....+..+|.++...|++++|+..|+++++++|+++.+|+++|.++..+|++++|+..|+++++++|++..++
T Consensus 4 ~~~~-~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 80 (137)
T 3q49_B 4 MKSP-SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAH 80 (137)
T ss_dssp --CC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred Cccc-cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHH
Confidence 4566 7788999999999999999999999999999999999999999999999999999999999999999976553
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.05 E-value=8.5e-10 Score=96.63 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=94.0
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcc----hHHhhhhHHHHHhcCChHHHHHHHHHHhhh------CCCch
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS----PTVYARRSLCYLMSDMPQDALNDAMQAQII------SPIWH 300 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~------~p~~~ 300 (340)
...+...|..++..|+|++|+..|+++++.+|+ + ..++..+|.+|...|++++|++.+++++++ .|...
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 83 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 83 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHH
Confidence 457788999999999999999999999999998 5 467888999999999999999999999988 56678
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHhhhccccccc
Q 019495 301 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 301 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
.+++.+|.++..+|++++|+..|++++++.++..
T Consensus 84 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 117 (338)
T 3ro2_A 84 KASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN 117 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999999999999999987643
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.05 E-value=6.1e-10 Score=88.06 Aligned_cols=88 Identities=10% Similarity=0.007 Sum_probs=78.4
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCch-HHHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH-IASYLQAA 308 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~-~a~~~~g~ 308 (340)
....+...|..++..|+|++|+..++++|+++|+ +..+|+++|.+|..+|++++|+.+|+++++++|++. .....++.
T Consensus 62 ~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~ 140 (162)
T 3rkv_A 62 NIPLYANMSQCYLNIGDLHEAEETSSEVLKREET-NEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKI 140 (162)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 3457788999999999999999999999999999 899999999999999999999999999999999998 55777777
Q ss_pred HHHHcCChHH
Q 019495 309 ALSAMGMENE 318 (340)
Q Consensus 309 ~~~~~~~~~~ 318 (340)
+...++++++
T Consensus 141 ~~~~~~~~~~ 150 (162)
T 3rkv_A 141 VTERRAEKKA 150 (162)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHH
Confidence 7776655544
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=99.05 E-value=9.2e-10 Score=95.96 Aligned_cols=103 Identities=15% Similarity=0.098 Sum_probs=89.0
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHH---hcCCCc---chHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCC-----
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFI---DAGTMV---SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPI----- 298 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al---~~~p~~---~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~----- 298 (340)
.+..+...|..++..|+|++|+..|++++ +..++. ...++.++|.+|..+|+|++|+..+++|+++.++
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~ 233 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMA 233 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHH
Confidence 45678899999999999999999999999 445541 1258889999999999999999999999988643
Q ss_pred -chHHHHHHHHHHHHcCChHHH-HHHHHhhhccccc
Q 019495 299 -WHIASYLQAAALSAMGMENEA-QVALKEGTTLEAK 332 (340)
Q Consensus 299 -~~~a~~~~g~~~~~~~~~~~A-~~~~~~al~l~p~ 332 (340)
...+|+++|.+|..+|++++| ..+|++|+++...
T Consensus 234 ~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~ 269 (293)
T 2qfc_A 234 LIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDI 269 (293)
T ss_dssp SHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Confidence 378899999999999999999 7889999987654
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.05 E-value=2.6e-10 Score=100.23 Aligned_cols=105 Identities=10% Similarity=-0.072 Sum_probs=92.0
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCc-----chHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCc----
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---- 299 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---- 299 (340)
..+..+.+.|..+...|+|++|+..|++++++.+.. ...++.++|.+|.. |++++|+..|++|+++.|..
T Consensus 74 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~ 152 (307)
T 2ifu_A 74 HAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLR 152 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChh
Confidence 445677888999999999999999999999885431 24678899999999 99999999999999998754
Q ss_pred --hHHHHHHHHHHHHcCChHHHHHHHHhhhccccccc
Q 019495 300 --HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 300 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
..+++++|.+|..+|+|++|+.+|++++++.|++.
T Consensus 153 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 189 (307)
T 2ifu_A 153 QAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEME 189 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Confidence 67899999999999999999999999999988754
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.04 E-value=8e-10 Score=100.53 Aligned_cols=103 Identities=17% Similarity=0.161 Sum_probs=94.6
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcch----HHhhhhHHHHHhcCChHHHHHHHHHHhhh------CCC
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP----TVYARRSLCYLMSDMPQDALNDAMQAQII------SPI 298 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~~------~p~ 298 (340)
.....+...|..++..|+|++|+..|+++++.+|+ +. .++..+|.+|...|++++|+..+++++++ +|.
T Consensus 46 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 124 (411)
T 4a1s_A 46 SMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTE-DLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLG 124 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc-ChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchH
Confidence 45667789999999999999999999999999999 54 57888999999999999999999999998 688
Q ss_pred chHHHHHHHHHHHHcCChHHHHHHHHhhhccccc
Q 019495 299 WHIASYLQAAALSAMGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 299 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 332 (340)
...+++.+|.+|..+|++++|+..|++++++.++
T Consensus 125 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 158 (411)
T 4a1s_A 125 EAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQ 158 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999998543
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=1.4e-10 Score=99.40 Aligned_cols=48 Identities=10% Similarity=0.127 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHHH-hCCCccccCCCCCCEEecCCCCeEEeccCCCccC
Q 019495 5 MRLRVVLHLAQALEYCT-SKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 55 (340)
Q Consensus 5 ~~~~i~~qi~~~l~ylH-~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~ 55 (340)
....++.||+.||.||| +.+ |+||||||.|||++. .++|+|||++...
T Consensus 171 ~~~~i~~qi~~~l~~lH~~~g-ivHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 171 DVEGIFNDVVENVKRLYQEAE-LVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHTSC-EECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred HHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 56789999999999999 899 999999999999998 8999999998754
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.03 E-value=5.8e-10 Score=95.80 Aligned_cols=103 Identities=13% Similarity=-0.053 Sum_probs=90.3
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCc-chHHhhhhHHHHHhcCChHHHHHHHHHHhhhC--CC-chHHHHHHHH
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-SPTVYARRSLCYLMSDMPQDALNDAMQAQIIS--PI-WHIASYLQAA 308 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~--p~-~~~a~~~~g~ 308 (340)
..+..|..+++.++|++|+..|++++...+.. ....++++|.++..+|++++|+..|++++.-. |. .+++++++|.
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~gl 216 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAM 216 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHH
Confidence 77889999999999999999999888763221 13578889999999999999999999998654 66 7789999999
Q ss_pred HHHHcCChHHHHHHHHhhhccccccccc
Q 019495 309 ALSAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 309 ~~~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
++..+|+.++|...|++++..+|+ ..+
T Consensus 217 aL~~lGr~deA~~~l~~a~a~~P~-~~~ 243 (282)
T 4f3v_A 217 ARRSQGNESAAVALLEWLQTTHPE-PKV 243 (282)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSCC-HHH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCc-HHH
Confidence 999999999999999999999998 544
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.03 E-value=8.8e-10 Score=99.72 Aligned_cols=106 Identities=15% Similarity=0.085 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCc-----chHHhhhhHHHHHhcCChHHHHHHHHHHhh-----hC
Q 019495 227 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQI-----IS 296 (340)
Q Consensus 227 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~-----~~ 296 (340)
....+..+...|..+...|+|++|++.|++++++.+.. ...++.++|.+|..+|++++|++.+++|++ .+
T Consensus 180 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~ 259 (383)
T 3ulq_A 180 NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNI 259 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcc
Confidence 34455678889999999999999999999999886541 225788999999999999999999999999 46
Q ss_pred -CCchHHHHHHHHHHHHcCChHHHHHHHHhhhccccc
Q 019495 297 -PIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 297 -p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 332 (340)
|....+++++|.++..+|++++|+..|++|+++.++
T Consensus 260 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 296 (383)
T 3ulq_A 260 LPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQK 296 (383)
T ss_dssp GGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999655
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.03 E-value=1.3e-09 Score=98.45 Aligned_cols=93 Identities=14% Similarity=0.100 Sum_probs=87.6
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
.....+.+.|..++..|+|++|++.|+++|+++|+ +..+++++|.+|..+|++++|++++++|++++|++..++..++.
T Consensus 271 ~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~ 349 (370)
T 1ihg_A 271 VALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLK 349 (370)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 44567889999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHH
Q 019495 309 ALSAMGMENEAQVA 322 (340)
Q Consensus 309 ~~~~~~~~~~A~~~ 322 (340)
++..++++++|...
T Consensus 350 ~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 350 VKQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988765
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=7.2e-10 Score=97.77 Aligned_cols=105 Identities=9% Similarity=0.011 Sum_probs=93.5
Q ss_pred HHHHHHHhHHhhhc--CHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCC-hHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 232 LNSKKKGDVAFRQK--DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM-PQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 232 ~~~~~~a~~~~~~~--~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
..|..++-.....+ +|++++++++++++.+|. +..+|..++.+....|. ++++++.++++++.+|.+..||+.++.
T Consensus 109 ~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dpr-Ny~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ 187 (331)
T 3dss_A 109 GTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSC 187 (331)
T ss_dssp HHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHH
T ss_pred HHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 34444444444555 599999999999999999 89999999999999998 699999999999999999999999999
Q ss_pred HHHHc--------------CChHHHHHHHHhhhcccccccccc
Q 019495 309 ALSAM--------------GMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 309 ~~~~~--------------~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
++..+ +.++++++++++++.++|+|.++|
T Consensus 188 ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW 230 (331)
T 3dss_A 188 LLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAW 230 (331)
T ss_dssp HHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHH
Confidence 99988 569999999999999999999988
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=9e-10 Score=97.14 Aligned_cols=109 Identities=7% Similarity=-0.117 Sum_probs=87.5
Q ss_pred HHHHHHHHHHhHHhhhcC----------HHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCC--hHHHHHHHHHHhhhC
Q 019495 229 QETLNSKKKGDVAFRQKD----------LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM--PQDALNDAMQAQIIS 296 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~----------~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~--~~~A~~~~~~al~~~ 296 (340)
.....|..++......++ +++++.+++.+|..+|. ++.+|..++.++..+++ ++++++.++++++.+
T Consensus 62 ~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~d 140 (331)
T 3dss_A 62 DFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEAD 140 (331)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhC
Confidence 344466666766665554 68888888888888888 88888888888888774 788888888888888
Q ss_pred CCchHHHHHHHHHHHHcCC-hHHHHHHHHhhhccccccccccC
Q 019495 297 PIWHIASYLQAAALSAMGM-ENEAQVALKEGTTLEAKKNSTAG 338 (340)
Q Consensus 297 p~~~~a~~~~g~~~~~~~~-~~~A~~~~~~al~l~p~~~~~~~ 338 (340)
|.+..||+.++.++..+|. +++++++++++++.+|.|.+||.
T Consensus 141 prNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~ 183 (331)
T 3dss_A 141 ERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWH 183 (331)
T ss_dssp TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHH
Confidence 8888888888888888888 58888888888888888888774
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=99.02 E-value=2.6e-09 Score=93.12 Aligned_cols=100 Identities=9% Similarity=-0.030 Sum_probs=85.6
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCc-----chHHhhhhHHHHHhcCChHHHHHHHHHHh---hhCCCc----h
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQ---IISPIW----H 300 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al---~~~p~~----~ 300 (340)
.....|..+...|+|++|+..|+++++..+.. ...++.++|.+|...|++++|+..+++|+ +..|++ .
T Consensus 117 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~ 196 (293)
T 2qfc_A 117 WQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDV 196 (293)
T ss_dssp HHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchH
Confidence 34557788889999999999999999865541 14578899999999999999999999999 455653 2
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHhhhccccc
Q 019495 301 IASYLQAAALSAMGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 301 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 332 (340)
.+++++|.+|..+|+|++|+.+|++|+++.++
T Consensus 197 ~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 68999999999999999999999999999865
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.02 E-value=8.5e-10 Score=88.56 Aligned_cols=82 Identities=12% Similarity=-0.015 Sum_probs=76.3
Q ss_pred CHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCc--hHHHHHHHHHHHHcCChHHHHHHH
Q 019495 246 DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--HIASYLQAAALSAMGMENEAQVAL 323 (340)
Q Consensus 246 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~--~~a~~~~g~~~~~~~~~~~A~~~~ 323 (340)
+..+|+..|+++++.+|+ +..++.++|.++...|++++|+..++++++++|+. ..+++.+|.++..+|++++|+..|
T Consensus 89 ~~~~a~~~~~~al~~~P~-~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y 167 (176)
T 2r5s_A 89 AESPELKRLEQELAANPD-NFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKY 167 (176)
T ss_dssp TSCHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHH
T ss_pred ccchHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHH
Confidence 334689999999999999 89999999999999999999999999999999986 569999999999999999999999
Q ss_pred Hhhhc
Q 019495 324 KEGTT 328 (340)
Q Consensus 324 ~~al~ 328 (340)
+++|.
T Consensus 168 ~~al~ 172 (176)
T 2r5s_A 168 RRQLY 172 (176)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99874
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.01 E-value=1.4e-09 Score=94.53 Aligned_cols=102 Identities=13% Similarity=-0.030 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhc--------CCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhC--
Q 019495 227 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS-- 296 (340)
Q Consensus 227 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-- 296 (340)
.......+...|..++..|++++|+..|+++++. .|. ...++.++|.+|...|++++|+..+++++++.
T Consensus 65 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 143 (311)
T 3nf1_A 65 HPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREK 143 (311)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChH-HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 3455667889999999999999999999999987 344 67788899999999999999999999999884
Q ss_pred ------CCchHHHHHHHHHHHHcCChHHHHHHHHhhhcc
Q 019495 297 ------PIWHIASYLQAAALSAMGMENEAQVALKEGTTL 329 (340)
Q Consensus 297 ------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 329 (340)
|....+++.+|.++..+|++++|+..|++++++
T Consensus 144 ~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 144 VLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEI 182 (311)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred hcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 777889999999999999999999999999998
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=99.01 E-value=9.9e-10 Score=95.77 Aligned_cols=102 Identities=10% Similarity=-0.014 Sum_probs=86.3
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcc-----hHHhhhhHHHHHhcCChHHHHHHHHHHhhh-------CCCch
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS-----PTVYARRSLCYLMSDMPQDALNDAMQAQII-------SPIWH 300 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-------~p~~~ 300 (340)
.+...|..+...++|++|+..|++++++.+... ..++.++|.+|...|++++|+..+++|++. .+...
T Consensus 117 ~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 196 (293)
T 3u3w_A 117 WQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDV 196 (293)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHH
T ss_pred HHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHH
Confidence 344578888899999999999999999655422 236889999999999999999999999953 23446
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHhhhccccccc
Q 019495 301 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 301 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
.+++++|.+|..+|+|++|+.++++|+++.++..
T Consensus 197 ~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~ 230 (293)
T 3u3w_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEISCRIN 230 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcC
Confidence 6899999999999999999999999999987753
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.01 E-value=1.1e-09 Score=89.24 Aligned_cols=107 Identities=11% Similarity=-0.084 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhc---CCC---cchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCC--c
Q 019495 228 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA---GTM---VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPI--W 299 (340)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~---~p~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~--~ 299 (340)
...+..+...|..+...|++++|++.|++++++ .++ .....+.++|.++...|++++|+..+++++++.+. +
T Consensus 63 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 142 (203)
T 3gw4_A 63 TAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADD 142 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccc
Confidence 345556777888888888888888888888876 332 13456777888888888888888888888866432 1
Q ss_pred ----hHHHHHHHHHHHHcCChHHHHHHHHhhhccccccc
Q 019495 300 ----HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 300 ----~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
..++..+|.++..+|++++|+..+++++++..+..
T Consensus 143 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 181 (203)
T 3gw4_A 143 QVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELE 181 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcC
Confidence 23457788888888888888888888887765543
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.3e-09 Score=98.61 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=93.6
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcc----hHHhhhhHHHHHhcCChHHHHHHHHHHhhh------CCCch
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS----PTVYARRSLCYLMSDMPQDALNDAMQAQII------SPIWH 300 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~------~p~~~ 300 (340)
...+...|..++..|+|++|+..|+++++.+|. + ..++..+|.+|...|++++|+..+++++++ .|...
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 87 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 87 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHH
Confidence 446788999999999999999999999999998 5 367888999999999999999999999988 56678
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHhhhccccccc
Q 019495 301 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 301 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
.+++.+|.++..+|++++|+..|++++++.|+..
T Consensus 88 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 121 (406)
T 3sf4_A 88 KASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN 121 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcc
Confidence 8999999999999999999999999999988743
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=1.7e-09 Score=94.20 Aligned_cols=96 Identities=9% Similarity=-0.029 Sum_probs=88.2
Q ss_pred HHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCc--hHHHHHHHHH
Q 019495 232 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--HIASYLQAAA 309 (340)
Q Consensus 232 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~--~~a~~~~g~~ 309 (340)
......+..+...+++++|++.|+++++.+|+ +..+++++|.+|...|++++|+..+.++++.+|++ ..++.++|.+
T Consensus 186 ~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~-~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~ 264 (287)
T 3qou_A 186 YQGLVAQIELLXQAADTPEIQQLQQQVAENPE-DAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEI 264 (287)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcccCccHHHHHHHHhcCCc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHH
Confidence 34455566677888899999999999999999 89999999999999999999999999999999999 8999999999
Q ss_pred HHHcCChHHHHHHHHhhhc
Q 019495 310 LSAMGMENEAQVALKEGTT 328 (340)
Q Consensus 310 ~~~~~~~~~A~~~~~~al~ 328 (340)
+..+|+.++|...|++++.
T Consensus 265 ~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 265 LAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHHHCTTCHHHHHHHHHHH
T ss_pred HHHcCCCCcHHHHHHHHHH
Confidence 9999999999999999985
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.99 E-value=3.3e-09 Score=91.14 Aligned_cols=98 Identities=15% Similarity=0.086 Sum_probs=85.1
Q ss_pred HHHHHHHHHHhHHhh----hcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHh----cCChHHHHHHHHHHhhhCCCch
Q 019495 229 QETLNSKKKGDVAFR----QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWH 300 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~ 300 (340)
.....+...|..+.. .+++++|+..|+++++.+ ++..+.++|.+|.. .+++++|+..++++++.+ ++
T Consensus 36 ~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~ 110 (273)
T 1ouv_A 36 KENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN---YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YA 110 (273)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CH
T ss_pred CCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--Cc
Confidence 344567888888888 999999999999999885 46778889999998 999999999999999884 78
Q ss_pred HHHHHHHHHHHH----cCChHHHHHHHHhhhcccc
Q 019495 301 IASYLQAAALSA----MGMENEAQVALKEGTTLEA 331 (340)
Q Consensus 301 ~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~p 331 (340)
.+++.+|.+|.. .+++++|+.+|++++++++
T Consensus 111 ~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 145 (273)
T 1ouv_A 111 EGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLND 145 (273)
T ss_dssp HHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCc
Confidence 999999999999 9999999999999998764
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.99 E-value=2.1e-09 Score=97.16 Aligned_cols=104 Identities=12% Similarity=-0.016 Sum_probs=93.4
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCC-----cchHHhhhhHHHHHhcCChHHHHHHHHHHhh-----hCCC
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTM-----VSPTVYARRSLCYLMSDMPQDALNDAMQAQI-----ISPI 298 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-----~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~-----~~p~ 298 (340)
..+..+...|..+...|+|++|++.|++++++.+. ....++.++|.+|...|++++|+..+++|++ .+|.
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~ 259 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDL 259 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGG
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChh
Confidence 45667889999999999999999999999986432 1346788999999999999999999999999 7888
Q ss_pred chHHHHHHHHHHHHcCChHHHHHHHHhhhccccc
Q 019495 299 WHIASYLQAAALSAMGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 299 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 332 (340)
...+++.+|.++..+|++++|+..+++|+++.++
T Consensus 260 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 260 LPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998765
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=2.2e-09 Score=95.10 Aligned_cols=94 Identities=11% Similarity=-0.049 Sum_probs=88.2
Q ss_pred hcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcC-ChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHc-C-ChHHHH
Q 019495 244 QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD-MPQDALNDAMQAQIISPIWHIASYLQAAALSAM-G-MENEAQ 320 (340)
Q Consensus 244 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~-~-~~~~A~ 320 (340)
.+..++|++.++++|+++|+ +.++|+.|+.++..++ .++++++.++++|+.+|++..+|+.++.++..+ + ++++++
T Consensus 67 ~e~se~AL~lt~~~L~~nP~-~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL 145 (349)
T 3q7a_A 67 EEKSERALELTEIIVRMNPA-HYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEI 145 (349)
T ss_dssp TCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHH
T ss_pred CCCCHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHH
Confidence 34457899999999999999 8999999999999999 599999999999999999999999999999998 8 999999
Q ss_pred HHHHhhhccccccccccC
Q 019495 321 VALKEGTTLEAKKNSTAG 338 (340)
Q Consensus 321 ~~~~~al~l~p~~~~~~~ 338 (340)
+.+++++++||+|..||.
T Consensus 146 ~~~~k~L~~dpkNy~AW~ 163 (349)
T 3q7a_A 146 EYIHGSLLPDPKNYHTWA 163 (349)
T ss_dssp HHHHHHTSSCTTCHHHHH
T ss_pred HHHHHHHHhCCCCHHHHH
Confidence 999999999999988873
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=98.98 E-value=2.3e-09 Score=77.61 Aligned_cols=84 Identities=10% Similarity=0.047 Sum_probs=71.0
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCch--HHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH--IASYLQA 307 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~--~a~~~~g 307 (340)
+...++..|..++..|+|++|+..|+++++++|+ +..+|.++|.+|..+|++++|++.+++++++.|+.. .+...+.
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l~ 84 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETDPD-YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSELQ 84 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHHH
Confidence 3456789999999999999999999999999999 889999999999999999999999999999987643 3444445
Q ss_pred HHHHHcC
Q 019495 308 AALSAMG 314 (340)
Q Consensus 308 ~~~~~~~ 314 (340)
.++...+
T Consensus 85 ~~l~~~~ 91 (100)
T 3ma5_A 85 DAKLKAE 91 (100)
T ss_dssp HHHHHHH
T ss_pred HHHHHcc
Confidence 5554443
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.98 E-value=2e-09 Score=83.80 Aligned_cols=105 Identities=9% Similarity=0.045 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCc-----chHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCc---
Q 019495 228 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--- 299 (340)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~--- 299 (340)
...+..+...|..++..|++++|+..|++++++.+.. ....+.++|.+|...|++++|+..+++++++.+..
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 85 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR 85 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Confidence 3456778899999999999999999999999875532 13578889999999999999999999999886553
Q ss_pred ---hHHHHHHHHHHHHcCChHHHHHHHHhhhccccc
Q 019495 300 ---HIASYLQAAALSAMGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 300 ---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 332 (340)
..+++.+|.++..+|++++|++.+++++++.++
T Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 121 (164)
T 3ro3_A 86 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 121 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 678999999999999999999999999988654
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.4e-09 Score=98.36 Aligned_cols=103 Identities=10% Similarity=-0.059 Sum_probs=52.9
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCc------chHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCc----
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV------SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---- 299 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---- 299 (340)
.+..+...|..++..|++++|+..|++|+++.+.. ...++.++|.+|..+|++++|++.+++|+++.+..
T Consensus 142 ~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 221 (383)
T 3ulq_A 142 KAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQ 221 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChH
Confidence 33444555555555555555555555555543221 12344555555555555555555555555553322
Q ss_pred --hHHHHHHHHHHHHcCChHHHHHHHHhhhccccc
Q 019495 300 --HIASYLQAAALSAMGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 300 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 332 (340)
..+++++|.+|..+|++++|+.+|++|+++.++
T Consensus 222 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 256 (383)
T 3ulq_A 222 LMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEE 256 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Confidence 135555555555555555555555555555443
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.96 E-value=3.1e-09 Score=75.82 Aligned_cols=72 Identities=14% Similarity=-0.091 Sum_probs=66.3
Q ss_pred CCCcchHHhhhhHHHHHhcCC---hHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccc
Q 019495 261 GTMVSPTVYARRSLCYLMSDM---PQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 333 (340)
Q Consensus 261 ~p~~~~~~~~~~~~~~~~~~~---~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 333 (340)
+|+ ++..+..+|.+++..++ ..+|...+++||+++|+++.+++.+|..++..|+|++|+.+|+++++.+|.+
T Consensus 2 ~p~-~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 2 NAV-TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCC-CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CCC-CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 577 78899999999875555 7899999999999999999999999999999999999999999999999983
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.95 E-value=2.9e-09 Score=99.30 Aligned_cols=108 Identities=8% Similarity=-0.045 Sum_probs=91.0
Q ss_pred hhhhHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhc-----CCCc--chHHhhhhHHHHHhcCChHHHHHHHHHHhhh
Q 019495 223 MWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA-----GTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQII 295 (340)
Q Consensus 223 ~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-----~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 295 (340)
.+.+.++.+....+.+..+..+|+|++|+..|++++++ ++++ -...+.++|.+|..+|+|++|+..++++|++
T Consensus 301 ~v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i 380 (490)
T 3n71_A 301 VVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDG 380 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 33455566667788888899999999999999999963 4442 3467889999999999999999999999977
Q ss_pred --------CCCchHHHHHHHHHHHHcCChHHHHHHHHhhhccc
Q 019495 296 --------SPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 330 (340)
Q Consensus 296 --------~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 330 (340)
+|+-...++++|.+|..+|+|++|+..|++|+++-
T Consensus 381 ~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~ 423 (490)
T 3n71_A 381 YMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAIL 423 (490)
T ss_dssp HHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 34556779999999999999999999999999764
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=98.94 E-value=8.2e-09 Score=76.57 Aligned_cols=83 Identities=17% Similarity=0.161 Sum_probs=77.3
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
...+...|..++..|++++|+..|+++++.+|. +...+..++.+|...|++++|+..++++++++|++..++..+|.++
T Consensus 43 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 121 (125)
T 1na0_A 43 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAK 121 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 346678899999999999999999999999999 8889999999999999999999999999999999999999999998
Q ss_pred HHcC
Q 019495 311 SAMG 314 (340)
Q Consensus 311 ~~~~ 314 (340)
..+|
T Consensus 122 ~~~g 125 (125)
T 1na0_A 122 QKQG 125 (125)
T ss_dssp HHHC
T ss_pred Hhcc
Confidence 8765
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.92 E-value=2.6e-09 Score=83.26 Aligned_cols=71 Identities=14% Similarity=-0.033 Sum_probs=63.1
Q ss_pred HHHHHHHHHHhHHhhhcCH----------HHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcC-----------ChHHHHH
Q 019495 229 QETLNSKKKGDVAFRQKDL----------KDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD-----------MPQDALN 287 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~----------~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~-----------~~~~A~~ 287 (340)
.++..+++.|..+...+++ ++|+..|++||+++|+ ...+|+++|.+|..+| ++++|++
T Consensus 34 ~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~-~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~ 112 (158)
T 1zu2_A 34 LDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQ 112 (158)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHhcccCcchhhhhccHHHHHH
Confidence 4566778888888887765 5999999999999999 8999999999999875 8999999
Q ss_pred HHHHHhhhCCCch
Q 019495 288 DAMQAQIISPIWH 300 (340)
Q Consensus 288 ~~~~al~~~p~~~ 300 (340)
.|++|++++|++.
T Consensus 113 ~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 113 FFQQAVDEQPDNT 125 (158)
T ss_dssp HHHHHHHHCTTCH
T ss_pred HHHHHHHhCCCCH
Confidence 9999999999975
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.89 E-value=9.2e-09 Score=88.29 Aligned_cols=99 Identities=20% Similarity=0.120 Sum_probs=86.0
Q ss_pred HHHHHHHHhHHhh----hcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHh----cCChHHHHHHHHHHhhhCCCchHH
Q 019495 231 TLNSKKKGDVAFR----QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWHIA 302 (340)
Q Consensus 231 ~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~a 302 (340)
...+...|..+.. .+++++|+..|+++++.+ +...+.++|.+|.. .+++++|++.++++++.+| ..+
T Consensus 146 ~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~--~~a 220 (273)
T 1ouv_A 146 GDGCTILGSLYDAGRGTPKDLKKALASYDKACDLK---DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN--GGG 220 (273)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC--HHH
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC--HHH
Confidence 4456677888887 899999999999999884 45778888999999 9999999999999999876 789
Q ss_pred HHHHHHHHHH----cCChHHHHHHHHhhhccccccc
Q 019495 303 SYLQAAALSA----MGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 303 ~~~~g~~~~~----~~~~~~A~~~~~~al~l~p~~~ 334 (340)
++.+|.+|.. .+++++|+.+|++|++++|++.
T Consensus 221 ~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a 256 (273)
T 1ouv_A 221 CFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGA 256 (273)
T ss_dssp HHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHcCCCcccCHHHHHHHHHHHHHcCCHHH
Confidence 9999999999 9999999999999999998764
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.89 E-value=4.3e-09 Score=95.07 Aligned_cols=104 Identities=9% Similarity=0.030 Sum_probs=74.7
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcch------HHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCc---
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP------TVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--- 299 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~------~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~--- 299 (340)
.....+...|..++..|+|++|+..|++++++.+. .. ..+.++|.+|...|++++|+..+++++++.|..
T Consensus 185 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 263 (406)
T 3sf4_A 185 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKE-FGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR 263 (406)
T ss_dssp HHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCc
Confidence 33446667777777777888888777777776554 22 266677777777777777777777777776655
Q ss_pred ---hHHHHHHHHHHHHcCChHHHHHHHHhhhcccccc
Q 019495 300 ---HIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 333 (340)
Q Consensus 300 ---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 333 (340)
..+++.+|.++..+|++++|+..|++++++.++.
T Consensus 264 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 300 (406)
T 3sf4_A 264 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL 300 (406)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhc
Confidence 6677777777777777777777777777776553
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.88 E-value=4.1e-09 Score=95.79 Aligned_cols=104 Identities=10% Similarity=0.014 Sum_probs=87.1
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchH------HhhhhHHHHHhcCChHHHHHHHHHHhhhCCCc---
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT------VYARRSLCYLMSDMPQDALNDAMQAQIISPIW--- 299 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~------~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~--- 299 (340)
.....+...|..++..|+|++|+..|++++++.+. ... .+.++|.+|...|++++|+..+++++++.+..
T Consensus 221 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 299 (411)
T 4a1s_A 221 AQGRACGNLGNTYYLLGDFQAAIEHHQERLRIARE-FGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGER 299 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCH
Confidence 34457778888999999999999999999988765 333 77888999999999999999999999887754
Q ss_pred ---hHHHHHHHHHHHHcCChHHHHHHHHhhhcccccc
Q 019495 300 ---HIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 333 (340)
Q Consensus 300 ---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 333 (340)
..+++.+|.++..+|++++|+.+|++++++.++.
T Consensus 300 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 336 (411)
T 4a1s_A 300 EVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQEL 336 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHC
Confidence 6788889999999999999999999999887664
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.88 E-value=1.6e-08 Score=74.28 Aligned_cols=80 Identities=9% Similarity=-0.069 Sum_probs=74.5
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
...+...|..++..|+|++|+..|+++++.+|+ +...+.++|.++...|++++|+..++++++++|++..++..++.+.
T Consensus 38 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 38 HVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 456788899999999999999999999999999 8899999999999999999999999999999999999999988775
Q ss_pred H
Q 019495 311 S 311 (340)
Q Consensus 311 ~ 311 (340)
.
T Consensus 117 ~ 117 (118)
T 1elw_A 117 A 117 (118)
T ss_dssp H
T ss_pred c
Confidence 3
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=8.8e-09 Score=94.56 Aligned_cols=98 Identities=11% Similarity=-0.095 Sum_probs=82.1
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHh-----cCCCc--chHHhhhhHHHHHhcCChHHHHHHHHHHhhh--------CC
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFID-----AGTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQII--------SP 297 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~-----~~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~p 297 (340)
...+.++.....|+|++|+..|+++++ ++|++ -...+.++|.+|..+|+|++|+..++++|++ +|
T Consensus 300 ~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp 379 (433)
T 3qww_A 300 NVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSL 379 (433)
T ss_dssp HHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCH
T ss_pred HHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCCh
Confidence 444445555667899999999999997 45552 3467888999999999999999999999977 35
Q ss_pred CchHHHHHHHHHHHHcCChHHHHHHHHhhhccc
Q 019495 298 IWHIASYLQAAALSAMGMENEAQVALKEGTTLE 330 (340)
Q Consensus 298 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 330 (340)
+-...++++|.+|..+|+|++|+..|++|+++-
T Consensus 380 ~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~ 412 (433)
T 3qww_A 380 NVASMWLKLGRLYMGLENKAAGEKALKKAIAIM 412 (433)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 556779999999999999999999999999864
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.85 E-value=6.6e-08 Score=74.19 Aligned_cols=81 Identities=11% Similarity=0.047 Sum_probs=75.3
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
...+...|..++..|+|++|+..|+++++.+|+ +..++.++|.+|...|++++|+..++++++++|++..++..++.+.
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGG-DVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 667889999999999999999999999999999 7899999999999999999999999999999999999998887765
Q ss_pred HH
Q 019495 311 SA 312 (340)
Q Consensus 311 ~~ 312 (340)
..
T Consensus 144 ~~ 145 (148)
T 2dba_A 144 GP 145 (148)
T ss_dssp CS
T ss_pred hh
Confidence 43
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.84 E-value=2.4e-08 Score=72.76 Aligned_cols=77 Identities=14% Similarity=-0.018 Sum_probs=69.2
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcC-------CCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAG-------TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS 303 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 303 (340)
+.+.+..|..++..|+|..|+..|++|++.. +. ...++..+|.||.++|++++|+..++++++++|++..+.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~-~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTID-KVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCccc-HHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 4577899999999999999999999999863 33 578889999999999999999999999999999999998
Q ss_pred HHHHH
Q 019495 304 YLQAA 308 (340)
Q Consensus 304 ~~~g~ 308 (340)
.+++.
T Consensus 84 ~n~~~ 88 (104)
T 2v5f_A 84 GNLKY 88 (104)
T ss_dssp HHHHH
T ss_pred hhHHH
Confidence 88873
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.84 E-value=1.1e-08 Score=83.19 Aligned_cols=102 Identities=11% Similarity=0.021 Sum_probs=92.6
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHh------cCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhh---CC---
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFID------AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII---SP--- 297 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~------~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~---~p--- 297 (340)
.+..+...|..++..|+|++|+..|+++++ ..+. ....+.++|.+|...|++++|+..+++++++ .+
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 103 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTA-EHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDP 103 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccH
Confidence 466778899999999999999999999999 8998 7889999999999999999999999999998 33
Q ss_pred -CchHHHHHHHHHHHHcCChHHHHHHHHhhhccccc
Q 019495 298 -IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 298 -~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 332 (340)
....+++++|.++..+|++++|+..+++++++.++
T Consensus 104 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 139 (203)
T 3gw4_A 104 LAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQ 139 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 34677999999999999999999999999988654
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.84 E-value=7.3e-09 Score=90.59 Aligned_cols=103 Identities=9% Similarity=0.050 Sum_probs=66.8
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCc-----chHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCc-----
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW----- 299 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~----- 299 (340)
....+...|..++..|++++|+..|+++++..+.. ....+.++|.++...|++++|++.+++++++.+..
T Consensus 182 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 261 (338)
T 3ro2_A 182 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAV 261 (338)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhH
Confidence 34456666667777777777777777776654431 11256666777777777777777777777665544
Q ss_pred -hHHHHHHHHHHHHcCChHHHHHHHHhhhccccc
Q 019495 300 -HIASYLQAAALSAMGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 300 -~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 332 (340)
..+++.+|.++..+|++++|+..|++++++.++
T Consensus 262 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 295 (338)
T 3ro2_A 262 EAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 295 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 556666777777777777777777777766554
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=98.84 E-value=6.7e-09 Score=90.06 Aligned_cols=73 Identities=11% Similarity=0.025 Sum_probs=68.9
Q ss_pred chHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 265 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
....+..+|..+...|++++|+..|+++++++|+++.+|+++|.+|..+|++++|+..|+++++++|++..++
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 75 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAH 75 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHH
Confidence 5678888999999999999999999999999999999999999999999999999999999999999986543
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.82 E-value=1.6e-08 Score=83.75 Aligned_cols=100 Identities=13% Similarity=-0.006 Sum_probs=72.9
Q ss_pred HHHHHHHHHhHHhhhc----CHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHh----cCChHHHHHHHHHHhhhCC--Cc
Q 019495 230 ETLNSKKKGDVAFRQK----DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISP--IW 299 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~----~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p--~~ 299 (340)
+.......|..+.. + ++++|++.|+++++. . ++..++++|.+|.. .+++.+|+.+|++|++..| ++
T Consensus 49 ~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~--g-~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~ 124 (212)
T 3rjv_A 49 DGDALALLAQLKIR-NPQQADYPQARQLAEKAVEA--G-SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAA 124 (212)
T ss_dssp CHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHH
T ss_pred CHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcch
Confidence 34455666666666 5 788888888888654 3 45667777888776 6778888888888888877 45
Q ss_pred hHHHHHHHHHHHH----cCChHHHHHHHHhhhccccccc
Q 019495 300 HIASYLQAAALSA----MGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 300 ~~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~p~~~ 334 (340)
+.+++++|.+|.. .+++++|+.+|++|+++ |.+.
T Consensus 125 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~ 162 (212)
T 3rjv_A 125 VDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTG 162 (212)
T ss_dssp HHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTT
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCH
Confidence 7888888888888 77888888888888777 4443
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=98.82 E-value=1.6e-08 Score=74.81 Aligned_cols=83 Identities=7% Similarity=-0.078 Sum_probs=70.6
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCch--HHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH--IASYLQAA 308 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~--~a~~~~g~ 308 (340)
...+...|..++..|+|++|+..|+++++++|+ ...++.++|.+|...|++++|+..++++++++|+.. .+...+..
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l~~ 97 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALDFDPT-YSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKELQV 97 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHHHHH
Confidence 456788999999999999999999999999999 889999999999999999999999999999998643 44444444
Q ss_pred HHHHcC
Q 019495 309 ALSAMG 314 (340)
Q Consensus 309 ~~~~~~ 314 (340)
.+..++
T Consensus 98 ~l~~l~ 103 (115)
T 2kat_A 98 FLRRLA 103 (115)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 444443
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.81 E-value=4e-08 Score=73.80 Aligned_cols=83 Identities=11% Similarity=-0.044 Sum_probs=72.6
Q ss_pred HHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcc---hHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 232 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 232 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
..+...|..++..|+|++|+..|+++++.+|+ + +.++..+|.+|...|++++|+..++++++.+|++..+...+..
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~ 118 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPT-HDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQER 118 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHH
Confidence 46778899999999999999999999999999 6 7889999999999999999999999999999999888776665
Q ss_pred HHHHcCC
Q 019495 309 ALSAMGM 315 (340)
Q Consensus 309 ~~~~~~~ 315 (340)
+-...++
T Consensus 119 l~~l~~~ 125 (129)
T 2xev_A 119 LQSIRLG 125 (129)
T ss_dssp HHHHC--
T ss_pred HHHHHhh
Confidence 5544443
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=98.81 E-value=3e-08 Score=87.86 Aligned_cols=103 Identities=16% Similarity=0.118 Sum_probs=83.3
Q ss_pred HHHHHHHHHhHHhhh---cCHHHHHHHHHHHHhcCCCcchHHhhhhHH--------------------------------
Q 019495 230 ETLNSKKKGDVAFRQ---KDLKDAIECYTQFIDAGTMVSPTVYARRSL-------------------------------- 274 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~---~~~~~A~~~~~~al~~~p~~~~~~~~~~~~-------------------------------- 274 (340)
++.+++.+|..++.. .++.+|+.+|++|++++|+ ++.++..++.
T Consensus 195 ~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~-~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~ 273 (372)
T 3ly7_A 195 ALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPE-FTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPEL 273 (372)
T ss_dssp GGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGG
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccC
Confidence 345666777776654 4568899999999999998 6555553333
Q ss_pred ------------HHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhccccccc
Q 019495 275 ------------CYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 275 ------------~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
.+...|++++|+..+++|+.++|+ ..+|..+|.++...|++++|++.|++|+.++|..+
T Consensus 274 ~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 274 NNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred CcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 344479999999999999999986 67888899999999999999999999999999864
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.80 E-value=1.4e-08 Score=91.76 Aligned_cols=104 Identities=12% Similarity=-0.023 Sum_probs=67.4
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCc------chHHhhhhHHHHHhcCChHHHHHHHHHHhhhCC-----
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV------SPTVYARRSLCYLMSDMPQDALNDAMQAQIISP----- 297 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p----- 297 (340)
..+..+...|..++..|++++|+..|++|+++.+.. ...++.++|.+|...|++++|++.+++|+++.+
T Consensus 139 ~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~ 218 (378)
T 3q15_A 139 EKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQND 218 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCH
Confidence 444566666777777777777777777777653321 234556677777777777777777777776532
Q ss_pred -CchHHHHHHHHHHHHcCChHHHHHHHHhhhccccc
Q 019495 298 -IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 298 -~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 332 (340)
....+++++|.+|..+|++++|+.+|++|+++..+
T Consensus 219 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~ 254 (378)
T 3q15_A 219 RFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSRE 254 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Confidence 12456677777777777777777777777766443
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=2.6e-08 Score=91.51 Aligned_cols=101 Identities=13% Similarity=0.031 Sum_probs=84.7
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhc-----CCCc--chHHhhhhHHHHHhcCChHHHHHHHHHHhhh-------
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDA-----GTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQII------- 295 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-----~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~------- 295 (340)
...........+..+|+|++|+..|++++++ +|++ -...+.+++.+|..+|+|++|+..++++|++
T Consensus 286 ~~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~ 365 (429)
T 3qwp_A 286 EVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPG 365 (429)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCC
Confidence 3445566677788999999999999999964 3442 2467888999999999999999999999976
Q ss_pred -CCCchHHHHHHHHHHHHcCChHHHHHHHHhhhccc
Q 019495 296 -SPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 330 (340)
Q Consensus 296 -~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 330 (340)
+|+-...++++|.+|..+|+|++|+..|++|+++-
T Consensus 366 ~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~ 401 (429)
T 3qwp_A 366 SHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIM 401 (429)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 34456679999999999999999999999999863
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.78 E-value=3.7e-08 Score=81.55 Aligned_cols=102 Identities=11% Similarity=-0.033 Sum_probs=88.8
Q ss_pred HHHHHHHHHhHHhh----hcCHHHHHHHHHHHHhcCCC-cchHHhhhhHHHHHh----cCChHHHHHHHHHHhhhCCCch
Q 019495 230 ETLNSKKKGDVAFR----QKDLKDAIECYTQFIDAGTM-VSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWH 300 (340)
Q Consensus 230 ~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~ 300 (340)
........|..+.. .+++++|++.|+++++.++. ..+..++++|.+|.. .+++.+|+.+|++|+++ |.++
T Consensus 84 ~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~ 162 (212)
T 3rjv_A 84 SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTG 162 (212)
T ss_dssp CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTT
T ss_pred CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCH
Confidence 34566778888877 89999999999999999983 147889999999999 88999999999999999 7788
Q ss_pred HHHHHHHHHHHHc-C-----ChHHHHHHHHhhhccccc
Q 019495 301 IASYLQAAALSAM-G-----MENEAQVALKEGTTLEAK 332 (340)
Q Consensus 301 ~a~~~~g~~~~~~-~-----~~~~A~~~~~~al~l~p~ 332 (340)
.+++++|.+|... | ++++|+.+|++|.+....
T Consensus 163 ~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~~ 200 (212)
T 3rjv_A 163 YAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFD 200 (212)
T ss_dssp HHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCCH
Confidence 9999999999865 3 999999999999987654
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=98.72 E-value=2.4e-08 Score=74.71 Aligned_cols=69 Identities=13% Similarity=-0.045 Sum_probs=65.6
Q ss_pred chHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccc
Q 019495 265 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 333 (340)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 333 (340)
.+..+..+|.++...|++++|+..++++++.+|+++.+++.+|.++..+|++++|+..|+++++++|++
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 71 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGREN 71 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcccc
Confidence 456788899999999999999999999999999999999999999999999999999999999999976
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.70 E-value=4.8e-08 Score=92.34 Aligned_cols=100 Identities=10% Similarity=-0.044 Sum_probs=48.1
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcch-HHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH-H
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP-TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA-L 310 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~-~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~-~ 310 (340)
.+...|..+...|++++|.+.|+++++..|. ++ .+|..++..+...|++++|++.|++|++..|.....+...|.+ +
T Consensus 323 l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~ 401 (530)
T 2ooe_A 323 LYFAYADYEESRMKYEKVHSIYNRLLAIEDI-DPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEY 401 (530)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHSSSS-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhCcccc-CchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Confidence 3444455555566666666666666666665 32 3555555544444444444444444444444444443333332 2
Q ss_pred HHcCChHHHHHHHHhhhcccccc
Q 019495 311 SAMGMENEAQVALKEGTTLEAKK 333 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~~ 333 (340)
..+|++++|...|++|++.+|++
T Consensus 402 ~~~~~~~~A~~~~e~al~~~p~~ 424 (530)
T 2ooe_A 402 YCSKDKSVAFKIFELGLKKYGDI 424 (530)
T ss_dssp HHTCCHHHHHHHHHHHHHHHTTC
T ss_pred HHcCChhHHHHHHHHHHHHCCCC
Confidence 23444444444444444444443
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.70 E-value=4.7e-08 Score=71.20 Aligned_cols=71 Identities=10% Similarity=-0.197 Sum_probs=63.0
Q ss_pred hHHhhhhHHHHHhcCChHHHHHHHHHHhhhC-------CCchHHHHHHHHHHHHcCChHHHHHHHHhhhccccccccc
Q 019495 266 PTVYARRSLCYLMSDMPQDALNDAMQAQIIS-------PIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
+.-.+.+|..++..++|..|+.++++|++.. +.....++.+|.+++.+|++++|+..++++++++|++..+
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~ 82 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRA 82 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHH
Confidence 3445678999999999999999999999874 3567889999999999999999999999999999998765
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.68 E-value=4.2e-08 Score=84.20 Aligned_cols=95 Identities=17% Similarity=0.120 Sum_probs=83.3
Q ss_pred HHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCc--hHHHHHHHHHHH
Q 019495 234 SKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--HIASYLQAAALS 311 (340)
Q Consensus 234 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~--~~a~~~~g~~~~ 311 (340)
....|..+...|+|++|.+.|+.++..+|+ .. ..+.+|.++++.+++.+|+..++++++..+.. ..+++.+|.++.
T Consensus 105 ~LayA~~L~~~g~y~eA~~~l~~~~~~~p~-~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~ 182 (282)
T 4f3v_A 105 TMGFAACEAAQGNYADAMEALEAAPVAGSE-HL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAA 182 (282)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHTSSCCTTCH-HH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhcCCc-hH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHH
Confidence 355678889999999999999999999998 66 77888999999999999999999998864332 458999999999
Q ss_pred HcCChHHHHHHHHhhhccc
Q 019495 312 AMGMENEAQVALKEGTTLE 330 (340)
Q Consensus 312 ~~~~~~~A~~~~~~al~l~ 330 (340)
.+|++++|+.+|++++.-.
T Consensus 183 ~LG~~~eAl~~l~~a~~g~ 201 (282)
T 4f3v_A 183 NLALFTEAERRLTEANDSP 201 (282)
T ss_dssp HTTCHHHHHHHHHHHHTST
T ss_pred HCCCHHHHHHHHHHHhcCC
Confidence 9999999999999998544
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.67 E-value=8.3e-08 Score=90.70 Aligned_cols=103 Identities=8% Similarity=-0.088 Sum_probs=92.7
Q ss_pred HHHHHHHHHhHHhh-------hcCHH-------HHHHHHHHHHh-cCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhh
Q 019495 230 ETLNSKKKGDVAFR-------QKDLK-------DAIECYTQFID-AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 294 (340)
Q Consensus 230 ~~~~~~~~a~~~~~-------~~~~~-------~A~~~~~~al~-~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 294 (340)
....+...|..+.. .|+++ +|+..|++|++ ..|+ +..+|..++..+...|++++|.+.|+++++
T Consensus 271 ~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~-~~~l~~~~~~~~~~~g~~~~A~~~~~~al~ 349 (530)
T 2ooe_A 271 HPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK-NMLLYFAYADYEESRMKYEKVHSIYNRLLA 349 (530)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHhcCCHHHHHHHHHHHhC
Confidence 34566777777765 68887 99999999998 8999 899999999999999999999999999999
Q ss_pred hCCCch-HHHHHHHHHHHHcCChHHHHHHHHhhhcccccc
Q 019495 295 ISPIWH-IASYLQAAALSAMGMENEAQVALKEGTTLEAKK 333 (340)
Q Consensus 295 ~~p~~~-~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 333 (340)
++|.++ .+|..+|.++..+|++++|.+.|++|++..|..
T Consensus 350 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~ 389 (530)
T 2ooe_A 350 IEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTR 389 (530)
T ss_dssp SSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCC
T ss_pred ccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCc
Confidence 999985 699999999999999999999999999988764
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=98.65 E-value=1.1e-07 Score=70.66 Aligned_cols=94 Identities=12% Similarity=0.026 Sum_probs=81.4
Q ss_pred hhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHH---HHHHHHHHhhhC-C-CchHHHHHHHHHHHHcCChH
Q 019495 243 RQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQD---ALNDAMQAQIIS-P-IWHIASYLQAAALSAMGMEN 317 (340)
Q Consensus 243 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~---A~~~~~~al~~~-p-~~~~a~~~~g~~~~~~~~~~ 317 (340)
.......+.+.|.+.+..++. +...-+++|.++.+...... +|..++..++.+ | ...+++|.+|.+++.+|+|+
T Consensus 13 ~~~~l~~~~~~y~~e~~~~~~-s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~ 91 (126)
T 1nzn_A 13 SVEDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYE 91 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred CHHHHHHHHHHHHHHhccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHH
Confidence 344556777788888887776 78888999999999887666 999999999988 6 67899999999999999999
Q ss_pred HHHHHHHhhhcccccccccc
Q 019495 318 EAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 318 ~A~~~~~~al~l~p~~~~~~ 337 (340)
+|..+++..|+++|.|.+|.
T Consensus 92 ~A~~~~~~lL~~eP~n~QA~ 111 (126)
T 1nzn_A 92 KALKYVRGLLQTEPQNNQAK 111 (126)
T ss_dssp HHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999998764
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.63 E-value=2.8e-07 Score=70.78 Aligned_cols=91 Identities=11% Similarity=-0.062 Sum_probs=82.2
Q ss_pred HHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHh----cCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHH
Q 019495 237 KGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 312 (340)
Q Consensus 237 ~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 312 (340)
.|..+...+..++|++.|+++.+. . ++...+++|.+|.. .+++.+|+++|++|.+. .++.+++++|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g-~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--N-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--C-CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 677777888899999999999998 3 56888899999998 88999999999999988 789999999999999
Q ss_pred ----cCChHHHHHHHHhhhccccc
Q 019495 313 ----MGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 313 ----~~~~~~A~~~~~~al~l~p~ 332 (340)
.+++++|+.+|++|.+....
T Consensus 106 G~g~~~d~~~A~~~~~~Aa~~g~~ 129 (138)
T 1klx_A 106 GKGVVKNEKQAVKTFEKACRLGSE 129 (138)
T ss_dssp TSSSCCCHHHHHHHHHHHHHTTCH
T ss_pred CCCCCcCHHHHHHHHHHHHHCCCH
Confidence 99999999999999987543
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.62 E-value=1e-07 Score=85.57 Aligned_cols=99 Identities=14% Similarity=-0.001 Sum_probs=85.2
Q ss_pred HHHHHhHHhhhcCHHHHHHHHHHHHhcC--------CCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCC-----ch
Q 019495 234 SKKKGDVAFRQKDLKDAIECYTQFIDAG--------TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPI-----WH 300 (340)
Q Consensus 234 ~~~~a~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-----~~ 300 (340)
+...|..++..|+|++|+..|++++++. |. ....+.++|.++...|++++|+..+++++++.+. ..
T Consensus 96 ~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 174 (373)
T 1hz4_A 96 LIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPM-HEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQL 174 (373)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHH
Confidence 5678888999999999999999999865 23 3456777899999999999999999999999875 34
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHhhhcccccc
Q 019495 301 IASYLQAAALSAMGMENEAQVALKEGTTLEAKK 333 (340)
Q Consensus 301 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 333 (340)
.+++.+|.++...|++++|...+++++++.+..
T Consensus 175 ~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~ 207 (373)
T 1hz4_A 175 QCLAMLIQCSLARGDLDNARSQLNRLENLLGNG 207 (373)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcc
Confidence 678899999999999999999999999887654
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.58 E-value=3e-07 Score=82.47 Aligned_cols=97 Identities=15% Similarity=0.148 Sum_probs=50.4
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHhc--------CCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhC--------
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS-------- 296 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-------- 296 (340)
.+...|..++..|++++|+..|++++++ .-- ..+.++|.++...|++.+|+..+++++++.
T Consensus 55 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~---~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~ 131 (373)
T 1hz4_A 55 ATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYAL---WSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQL 131 (373)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTS
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccC
Confidence 3444455555555555555555555431 121 223345555555555555555555555543
Q ss_pred CCchHHHHHHHHHHHHcCChHHHHHHHHhhhccccc
Q 019495 297 PIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 297 p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 332 (340)
|....++..+|.++..+|++++|...+++++++.++
T Consensus 132 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 132 PMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred cHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 223344555555555555555555555555555543
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=98.55 E-value=4.1e-08 Score=88.19 Aligned_cols=49 Identities=20% Similarity=0.279 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC----------CeEEeccCCCccC
Q 019495 6 RLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----------NPRLSTFGLMKNS 55 (340)
Q Consensus 6 ~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~----------~~kl~dfg~~~~~ 55 (340)
...++.||+.+|.|||+.| ||||||||.|||++++| .+.|+||+.+...
T Consensus 207 ~~~l~~qll~~l~~lH~~g-IVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 207 PASLYADLIALILRLAKHG-LIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp HHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred HHHHHHHHHHHHHHHHHCC-CcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 3467899999999999999 99999999999998776 3789999987653
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=2.5e-07 Score=78.83 Aligned_cols=89 Identities=11% Similarity=0.003 Sum_probs=80.1
Q ss_pred cCHHHHHHHHHHHHhcCCCc-chHHhhhhHHHHHh-----cCChHHHHHHHHHHhhhCCCc-hHHHHHHHHHHHHc-CCh
Q 019495 245 KDLKDAIECYTQFIDAGTMV-SPTVYARRSLCYLM-----SDMPQDALNDAMQAQIISPIW-HIASYLQAAALSAM-GME 316 (340)
Q Consensus 245 ~~~~~A~~~~~~al~~~p~~-~~~~~~~~~~~~~~-----~~~~~~A~~~~~~al~~~p~~-~~a~~~~g~~~~~~-~~~ 316 (340)
+...+|...++++|+++|+. +..+|..+|..|.. .|+.++|.+.|++||+++|+. ...++.+|..++.. |++
T Consensus 177 ~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~ 256 (301)
T 3u64_A 177 DTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNR 256 (301)
T ss_dssp HHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCH
T ss_pred HhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCH
Confidence 45678999999999999993 35688889999999 499999999999999999975 99999999999885 999
Q ss_pred HHHHHHHHhhhcccccc
Q 019495 317 NEAQVALKEGTTLEAKK 333 (340)
Q Consensus 317 ~~A~~~~~~al~l~p~~ 333 (340)
++|.+.+++|+..+|..
T Consensus 257 ~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 257 AGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHHHcCCCCC
Confidence 99999999999999883
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.46 E-value=3.5e-07 Score=85.27 Aligned_cols=104 Identities=9% Similarity=-0.042 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHh-----cCCCc--chHHhhhhHHHHHhcCChHHHHHHHHHHhhh----
Q 019495 227 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFID-----AGTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQII---- 295 (340)
Q Consensus 227 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-----~~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~---- 295 (340)
....+..+.+.|..+..+|+|++|+..|+++|+ ++|++ -...++++|.+|..+|+|++|+..+++|+++
T Consensus 347 Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~ 426 (490)
T 3n71_A 347 NLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVT 426 (490)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 345666788899999999999999999999995 34442 4577889999999999999999999999976
Q ss_pred -CCC---chHHHHHHHHHHHHcCChHHHHHHHHhhhccc
Q 019495 296 -SPI---WHIASYLQAAALSAMGMENEAQVALKEGTTLE 330 (340)
Q Consensus 296 -~p~---~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 330 (340)
-|+ -.+....++.++..+++|++|...|+++.+-.
T Consensus 427 lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 427 HGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp TCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 244 45667888999999999999999999987644
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.45 E-value=8.4e-07 Score=82.18 Aligned_cols=94 Identities=10% Similarity=0.015 Sum_probs=67.4
Q ss_pred HHHHHHhHHhhhc---CHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhc----CChHHHHHHHHHHhhhCCCchHHHHH
Q 019495 233 NSKKKGDVAFRQK---DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS----DMPQDALNDAMQAQIISPIWHIASYL 305 (340)
Q Consensus 233 ~~~~~a~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~----~~~~~A~~~~~~al~~~p~~~~a~~~ 305 (340)
.....|..+...| ++++|++.|+++++.++. ....++++|.+|... +++++|+.+|+++. |+++.++++
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~-~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~ 253 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTV-TAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVS 253 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCS-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHH
Confidence 4566666777777 777777777777777777 666666677777665 67777777777777 777777777
Q ss_pred HHHH-H--HHcCChHHHHHHHHhhhccc
Q 019495 306 QAAA-L--SAMGMENEAQVALKEGTTLE 330 (340)
Q Consensus 306 ~g~~-~--~~~~~~~~A~~~~~~al~l~ 330 (340)
+|.+ + ...+++++|+.+|+++.+.+
T Consensus 254 Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g 281 (452)
T 3e4b_A 254 LAQLLYDFPELGDVEQMMKYLDNGRAAD 281 (452)
T ss_dssp HHHHHHHSGGGCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHCC
Confidence 7776 3 45677777777777777543
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.43 E-value=7.9e-07 Score=83.07 Aligned_cols=96 Identities=14% Similarity=-0.008 Sum_probs=80.9
Q ss_pred HHHHHHHhHHhhhc---CHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHh----cCChHHHHHHHHHHhhhCCCchHHHH
Q 019495 232 LNSKKKGDVAFRQK---DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWHIASY 304 (340)
Q Consensus 232 ~~~~~~a~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~~ 304 (340)
..+...|..++..| ++++|++.|+++++. . ++..++++|.+|.. .+++++|+++|++|++.. ++.+++
T Consensus 329 ~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~ 403 (490)
T 2xm6_A 329 TAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--G-EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQV 403 (490)
T ss_dssp HHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHH
T ss_pred HHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHHH
Confidence 34556666666644 899999999999987 3 56788889999998 889999999999999864 689999
Q ss_pred HHHHHHHH----cCChHHHHHHHHhhhccccc
Q 019495 305 LQAAALSA----MGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 305 ~~g~~~~~----~~~~~~A~~~~~~al~l~p~ 332 (340)
++|.+|.. .+++++|+.+|++|++.+|+
T Consensus 404 ~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~ 435 (490)
T 2xm6_A 404 QLGEIYYYGLGVERDYVQAWAWFDTASTNDMN 435 (490)
T ss_dssp HHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCC
Confidence 99999998 89999999999999999843
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.41 E-value=1.1e-06 Score=67.31 Aligned_cols=80 Identities=18% Similarity=0.034 Sum_probs=71.9
Q ss_pred hcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHH----cCChHHH
Q 019495 244 QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA----MGMENEA 319 (340)
Q Consensus 244 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~----~~~~~~A 319 (340)
.+++++|++.|+++.+.+.. ... +|.+|...+.+.+|+++|++|.+. .++.+++++|.+|.. .+++++|
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~-~a~----lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A 80 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEM-FGC----LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKA 80 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCT-THH----HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCH-hhh----HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHH
Confidence 46899999999999999755 333 899999999999999999999998 789999999999999 8999999
Q ss_pred HHHHHhhhccc
Q 019495 320 QVALKEGTTLE 330 (340)
Q Consensus 320 ~~~~~~al~l~ 330 (340)
+.+|++|.+..
T Consensus 81 ~~~~~~Aa~~g 91 (138)
T 1klx_A 81 AQYYSKACGLN 91 (138)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHcCC
Confidence 99999998763
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.29 E-value=2e-06 Score=61.06 Aligned_cols=69 Identities=7% Similarity=-0.093 Sum_probs=61.0
Q ss_pred HHHHHHHHhHHhhhcC---HHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCch
Q 019495 231 TLNSKKKGDVAFRQKD---LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 300 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~---~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 300 (340)
+..+...|+.++..++ ..+|...++++++++|+ +......+|..++..|+|.+|+..++++++.+|..+
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~-~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~ 77 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY-NEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNL 77 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTC
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 4566777888865554 79999999999999999 899999999999999999999999999999999843
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.27 E-value=5.6e-06 Score=77.27 Aligned_cols=97 Identities=11% Similarity=-0.079 Sum_probs=81.6
Q ss_pred HHHHHHHHHHhHHhh----hcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHh----cCChHHHHHHHHHHhhhCCCch
Q 019495 229 QETLNSKKKGDVAFR----QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWH 300 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~ 300 (340)
.++......|..++. .+++++|++.|+++++.+ ++..++++|.+|.. .+++++|+.+|+++.+. +++
T Consensus 73 ~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~---~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~ 147 (490)
T 2xm6_A 73 GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKG---LPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRD 147 (490)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCH
T ss_pred CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCH
Confidence 445577788888888 899999999999998863 45777788999988 78999999999999876 578
Q ss_pred HHHHHHHHHHHH----cCChHHHHHHHHhhhccc
Q 019495 301 IASYLQAAALSA----MGMENEAQVALKEGTTLE 330 (340)
Q Consensus 301 ~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~ 330 (340)
.+++.+|.+|.. .+++++|+.+|+++++.+
T Consensus 148 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~ 181 (490)
T 2xm6_A 148 SGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQG 181 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 999999999988 889999999999998763
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.25 E-value=3.9e-06 Score=64.60 Aligned_cols=81 Identities=12% Similarity=-0.006 Sum_probs=68.9
Q ss_pred HHHHHHHHHhHHhhhc---CHHHHHHHHHHHHhcC-CCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHH
Q 019495 230 ETLNSKKKGDVAFRQK---DLKDAIECYTQFIDAG-TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 305 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~---~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 305 (340)
.....++.|-.+...+ ++++|+..++..++.+ |....++++++|..|+++|+|.+|+++++++|+++|++.+|..-
T Consensus 31 ~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~L 110 (152)
T 1pc2_A 31 SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKEL 110 (152)
T ss_dssp CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 3456677788888766 8889999999999999 73367889999999999999999999999999999999999776
Q ss_pred HHHHH
Q 019495 306 QAAAL 310 (340)
Q Consensus 306 ~g~~~ 310 (340)
+-.+-
T Consensus 111 k~~ie 115 (152)
T 1pc2_A 111 ERLID 115 (152)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
|
| >3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.20 E-value=7.4e-06 Score=63.51 Aligned_cols=96 Identities=7% Similarity=-0.054 Sum_probs=76.8
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCc--------chHHhhhhHHHHHhcCChHHHHHHHHHHhhhC-----
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--------SPTVYARRSLCYLMSDMPQDALNDAMQAQIIS----- 296 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~----- 296 (340)
.+..+++....++..|.|+.|+-....++.+..++ ....+..+|..++..++|..|...|++||++.
T Consensus 19 ~~~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k 98 (167)
T 3ffl_A 19 SHMNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSK 98 (167)
T ss_dssp --CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--
T ss_pred cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhc
Confidence 34567888888999999999999999987664331 12366778999999999999999999997652
Q ss_pred -C-------------------CchHHHHHHHHHHHHcCChHHHHHHHHh
Q 019495 297 -P-------------------IWHIASYLQAAALSAMGMENEAQVALKE 325 (340)
Q Consensus 297 -p-------------------~~~~a~~~~g~~~~~~~~~~~A~~~~~~ 325 (340)
+ .+.+..|++|.||..++++++|+..++.
T Consensus 99 ~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 99 TSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 1 1237889999999999999999999875
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=98.20 E-value=1.3e-05 Score=69.65 Aligned_cols=61 Identities=11% Similarity=-0.056 Sum_probs=30.6
Q ss_pred HHHhHHhhhcCHHHHHHHHHHHHhcCC--CcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCC
Q 019495 236 KKGDVAFRQKDLKDAIECYTQFIDAGT--MVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISP 297 (340)
Q Consensus 236 ~~a~~~~~~~~~~~A~~~~~~al~~~p--~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p 297 (340)
..|..+...|++++|++.+.++|+.+| + +.+++...+.+++++|+.+.|.+.+++..+.+|
T Consensus 105 ~la~i~~~~g~~eeAL~~l~~~i~~~~~~~-~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~ 167 (310)
T 3mv2_B 105 LLATAQAILGDLDKSLETCVEGIDNDEAEG-TTELLLLAIEVALLNNNVSTASTIFDNYTNAIE 167 (310)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHTSSCSTT-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHhccCCCcC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCc
Confidence 444444455555555555555555444 3 444444445555555555555555555555544
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.16 E-value=1.8e-06 Score=78.87 Aligned_cols=102 Identities=8% Similarity=0.024 Sum_probs=81.0
Q ss_pred HHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcc----------------hHHhhhhHHHHHhcCChHHHHHHHHHHhhh
Q 019495 232 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS----------------PTVYARRSLCYLMSDMPQDALNDAMQAQII 295 (340)
Q Consensus 232 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~----------------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 295 (340)
....++|..+++.|+|++|++.|.++++..+... ..++.++|.+|...|++++|++.+.+++++
T Consensus 5 ~~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~ 84 (434)
T 4b4t_Q 5 GSKLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEY 84 (434)
T ss_dssp THHHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 3456788889999999999999999999888731 124677899999999999999999999988
Q ss_pred CCCchHH------HHHHHHHHHHcCChHHHHHHHHhhhcccccc
Q 019495 296 SPIWHIA------SYLQAAALSAMGMENEAQVALKEGTTLEAKK 333 (340)
Q Consensus 296 ~p~~~~a------~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 333 (340)
.+...++ +..+|.++...|++++|+..++++++..++.
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~ 128 (434)
T 4b4t_Q 85 MMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKRE 128 (434)
T ss_dssp HHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHS
T ss_pred HHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh
Confidence 7664433 4456777778888888888888888776654
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=98.15 E-value=7e-06 Score=83.74 Aligned_cols=94 Identities=16% Similarity=0.099 Sum_probs=80.6
Q ss_pred HHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCC--------------
Q 019495 232 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISP-------------- 297 (340)
Q Consensus 232 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p-------------- 297 (340)
..+...|+.++..|+|++|+.+|+++ ..|.+++.+|.++|++++|++.+++|...++
T Consensus 1196 ad~~~iGd~le~eg~YeeA~~~Y~kA---------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef 1266 (1630)
T 1xi4_A 1196 AHIQQVGDRCYDEKMYDAAKLLYNNV---------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEF 1266 (1630)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHhh---------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHH
Confidence 35678999999999999999999996 3588899999999999999999999965544
Q ss_pred -----------CchHHHHHHHHHHHHcCChHHHHHHHHhhhccccccc
Q 019495 298 -----------IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 298 -----------~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
.+++.+..++..|...|.|++|+..+++||.+|+.+.
T Consensus 1267 ~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~ 1314 (1630)
T 1xi4_A 1267 RLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHM 1314 (1630)
T ss_pred HHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHh
Confidence 2455566778889999999999999999999998754
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=98.14 E-value=4.1e-06 Score=62.35 Aligned_cols=89 Identities=8% Similarity=-0.100 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCC---hHHHHHHHHHHhhhCCC-chHHHHHHHHHHHHcCChHHHHHH
Q 019495 247 LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM---PQDALNDAMQAQIISPI-WHIASYLQAAALSAMGMENEAQVA 322 (340)
Q Consensus 247 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~---~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~~~~~~A~~~ 322 (340)
.....+.|.+=+ ++..+...-++.|-++++..+ ..++|..++..++.+|. ..+.+|.+|.+++.+|+|++|..+
T Consensus 23 L~~l~~qy~~E~--~~~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y 100 (134)
T 3o48_A 23 LEILRQQVVSEG--GPTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRY 100 (134)
T ss_dssp HHHHHHHHHHTT--GGGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHh--CCCCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHH
Confidence 344444454433 233356777788888887664 45799999999999984 589999999999999999999999
Q ss_pred HHhhhcccccccccc
Q 019495 323 LKEGTTLEAKKNSTA 337 (340)
Q Consensus 323 ~~~al~l~p~~~~~~ 337 (340)
.+..|+++|+|.+|.
T Consensus 101 ~d~lL~~eP~N~QA~ 115 (134)
T 3o48_A 101 VDTLFEHERNNKQVG 115 (134)
T ss_dssp HHHHHTTCTTCHHHH
T ss_pred HHHHHhhCCCCHHHH
Confidence 999999999988764
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.13 E-value=1e-05 Score=74.81 Aligned_cols=94 Identities=11% Similarity=-0.072 Sum_probs=70.3
Q ss_pred HHHHHHHHHhH-H--hhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcC-----ChHHHHHHHHHHhhhCCCchH
Q 019495 230 ETLNSKKKGDV-A--FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD-----MPQDALNDAMQAQIISPIWHI 301 (340)
Q Consensus 230 ~~~~~~~~a~~-~--~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~-----~~~~A~~~~~~al~~~p~~~~ 301 (340)
+.......|.. + ...+++++|++.|+++++.+ ++...+++|.+|.. | ++.+|+++|++|. +.++.
T Consensus 247 ~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g---~~~A~~~Lg~~y~~-G~g~~~d~~~A~~~~~~Aa---~g~~~ 319 (452)
T 3e4b_A 247 YPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD---QPRAELLLGKLYYE-GKWVPADAKAAEAHFEKAV---GREVA 319 (452)
T ss_dssp STHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHH-CSSSCCCHHHHHHHHHTTT---TTCHH
T ss_pred CHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHc-CCCCCCCHHHHHHHHHHHh---CCCHH
Confidence 33455566666 3 46788888888888888664 45677778888874 4 8888888888888 78888
Q ss_pred HHHHHHHHHHH----cCChHHHHHHHHhhhccc
Q 019495 302 ASYLQAAALSA----MGMENEAQVALKEGTTLE 330 (340)
Q Consensus 302 a~~~~g~~~~~----~~~~~~A~~~~~~al~l~ 330 (340)
+++++|.+|.. ..++++|+.+|++|.+..
T Consensus 320 A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 352 (452)
T 3e4b_A 320 ADYYLGQIYRRGYLGKVYPQKALDHLLTAARNG 352 (452)
T ss_dssp HHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhhC
Confidence 88888887776 348888888888887643
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=98.05 E-value=1.2e-05 Score=73.11 Aligned_cols=96 Identities=9% Similarity=-0.020 Sum_probs=72.0
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
..+..+...|..++..|+|++|+++|.++ + +...|...+.++...|+++.|...... |..+|++ .-.+..
T Consensus 146 ~~a~n~~~LA~~L~~Lg~yq~AVea~~KA-----~-~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~---l~~lv~ 215 (449)
T 1b89_A 146 NNVSNFGRLASTLVHLGEYQAAVDGARKA-----N-STRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADE---LEELIN 215 (449)
T ss_dssp HHTTCHHHHHHHHHTTTCHHHHHHHHHHH-----T-CHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHH---HHHHHH
T ss_pred HHhhhHHHHHHHHHHhccHHHHHHHHHHc-----C-CchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhh---HHHHHH
Confidence 45567778888888888888888888888 3 456677777777777888888655553 4455554 335678
Q ss_pred HHHHcCChHHHHHHHHhhhccccccc
Q 019495 309 ALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 309 ~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
+|...|++++|+..+++++.+++...
T Consensus 216 ~Yek~G~~eEai~lLe~aL~le~ah~ 241 (449)
T 1b89_A 216 YYQDRGYFEELITMLEAALGLERAHM 241 (449)
T ss_dssp HHHHTTCHHHHHHHHHHHTTSTTCCH
T ss_pred HHHHCCCHHHHHHHHHHHhCCcHHHH
Confidence 89999999999999999999987653
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.04 E-value=1.5e-05 Score=60.10 Aligned_cols=73 Identities=7% Similarity=-0.098 Sum_probs=63.1
Q ss_pred chHHhhhhHHHHHhcCC---hHHHHHHHHHHhhhCC-CchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 265 SPTVYARRSLCYLMSDM---PQDALNDAMQAQIISP-IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 265 ~~~~~~~~~~~~~~~~~---~~~A~~~~~~al~~~p-~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
+...-+++|.++.+... ..++|..++..++.+| ...+.+|.+|.+++.+|+|++|..+.+..|+++|+|.+|.
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~ 114 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVG 114 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHH
Confidence 56778888888888665 4579999999999888 4678999999999999999999999999999999987764
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=98.02 E-value=2.3e-05 Score=68.11 Aligned_cols=100 Identities=9% Similarity=-0.097 Sum_probs=79.2
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCC---cchHHhhhhHH--HHHhcC--ChHHHHHHHHHHhhhCCC--c
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTM---VSPTVYARRSL--CYLMSD--MPQDALNDAMQAQIISPI--W 299 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~~~~~--~~~~~~--~~~~A~~~~~~al~~~p~--~ 299 (340)
...+.....+..+...|+.+.|.+.+++..+.+|+ .+......++. +.+..| ++++|+..|+++.+..|+ .
T Consensus 134 ~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~ 213 (310)
T 3mv2_B 134 GTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKT 213 (310)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHH
T ss_pred CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCccc
Confidence 56667778889999999999999999999999982 01233334443 355555 899999999999999887 3
Q ss_pred hHHHHHHHHHHHHcCChHHHHHHHHhhhcccc
Q 019495 300 HIASYLQAAALSAMGMENEAQVALKEGTTLEA 331 (340)
Q Consensus 300 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p 331 (340)
...+++ ++..+|++++|.+.+++.+++.|
T Consensus 214 ~~lLln---~~~~~g~~~eAe~~L~~l~~~~p 242 (310)
T 3mv2_B 214 QLGLLN---LHLQQRNIAEAQGIVELLLSDYY 242 (310)
T ss_dssp HHHHHH---HHHHHTCHHHHHHHHHHHHSHHH
T ss_pred HHHHHH---HHHHcCCHHHHHHHHHHHHHhcc
Confidence 445555 89999999999999999888843
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=97.98 E-value=2.1e-05 Score=80.32 Aligned_cols=90 Identities=14% Similarity=0.155 Sum_probs=74.5
Q ss_pred HHhHHhhhcCHHHHHHHHHHHH--------------------hcC--CCcchHHhhhhHHHHHhcCChHHHHHHHHHHhh
Q 019495 237 KGDVAFRQKDLKDAIECYTQFI--------------------DAG--TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 294 (340)
Q Consensus 237 ~a~~~~~~~~~~~A~~~~~~al--------------------~~~--p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 294 (340)
.|..+...|.|++|...|+++- +.. .+ .+.+|.++|.++...|++.+|+..|.+|
T Consensus 1055 IA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn-~p~vWsqLAKAql~~G~~kEAIdsYiKA-- 1131 (1630)
T 1xi4_A 1055 IANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCN-EPAVWSQLAKAQLQKGMVKEAIDSYIKA-- 1131 (1630)
T ss_pred HHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcC-CHHHHHHHHHHHHhCCCHHHHHHHHHhc--
Confidence 4777777777777777665542 111 23 5688999999999999999999999887
Q ss_pred hCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhccccc
Q 019495 295 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 295 ~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 332 (340)
+++.+|++.|.++..+|+|++|+++|+.|.+.+++
T Consensus 1132 ---dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1132 ---DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred ---CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 88999999999999999999999999999988854
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.95 E-value=2.6e-05 Score=70.99 Aligned_cols=100 Identities=10% Similarity=-0.004 Sum_probs=83.3
Q ss_pred HHHHhHHhhhcCHHHHHHHHHHHHhcCCCc-----chHHhhhhHHHHHhcCChHHHHHHHHHHhhh------CCCchHHH
Q 019495 235 KKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQII------SPIWHIAS 303 (340)
Q Consensus 235 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~------~p~~~~a~ 303 (340)
...+..+...|++++|+..|++++...+.. ...++.++|.+|...|+|.+|+..+++++.. .+...+++
T Consensus 99 ~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~ 178 (434)
T 4b4t_Q 99 TLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVH 178 (434)
T ss_dssp HHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHH
Confidence 334555667899999999999998654321 3567888999999999999999999999876 45567889
Q ss_pred HHHHHHHHHcCChHHHHHHHHhhhccccccc
Q 019495 304 YLQAAALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 304 ~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
...|.+|..+|+|++|...|++++++.+...
T Consensus 179 ~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~ 209 (434)
T 4b4t_Q 179 LLESKVYHKLRNLAKSKASLTAARTAANSIY 209 (434)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHHhhcCC
Confidence 9999999999999999999999999877643
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=97.88 E-value=1.1e-05 Score=73.39 Aligned_cols=87 Identities=16% Similarity=0.032 Sum_probs=64.5
Q ss_pred HHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHH
Q 019495 232 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 311 (340)
Q Consensus 232 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 311 (340)
..+...|+.++..|+|++|+.+|+++ ..|.++|.|+.++|+|++|++.+.+| +++..|...+.++.
T Consensus 123 ~a~~~IGd~~~~~g~yeeA~~~Y~~a---------~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv 188 (449)
T 1b89_A 123 AHIQQVGDRCYDEKMYDAAKLLYNNV---------SNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACV 188 (449)
T ss_dssp --------------CTTTHHHHHHHT---------TCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh---------hhHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHH
Confidence 38899999999999999999999977 34888999999999999999999999 47899999999999
Q ss_pred HcCChHHHHHHHHhhhcccccc
Q 019495 312 AMGMENEAQVALKEGTTLEAKK 333 (340)
Q Consensus 312 ~~~~~~~A~~~~~~al~l~p~~ 333 (340)
.+|+++.|..+... +..+|++
T Consensus 189 ~~~ef~lA~~~~l~-L~~~ad~ 209 (449)
T 1b89_A 189 DGKEFRLAQMCGLH-IVVHADE 209 (449)
T ss_dssp HTTCHHHHHHTTTT-TTTCHHH
T ss_pred HcCcHHHHHHHHHH-HHhCHhh
Confidence 99999999887775 4466653
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=97.79 E-value=4.1e-06 Score=73.20 Aligned_cols=76 Identities=16% Similarity=0.158 Sum_probs=48.3
Q ss_pred ccccCCCCCCEEecC--CCCeEEeccCCCccCCCCCccccCCcc---cCcccccC-----CC---------CCCCcceeh
Q 019495 26 ALYHDLNAYRILFDE--DGNPRLSTFGLMKNSRDGKSYSTNLAF---TPPEYLRT-----GR---------VTPESVIYS 86 (340)
Q Consensus 26 iiH~dlk~~nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~y---~aPE~~~~-----~~---------~~~~~Di~s 86 (340)
++|+|+++.||+++. ++.+.|+||+.+....+.......... ..|+.... +. .....+.|+
T Consensus 193 ~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r~~~~~~~~~ 272 (304)
T 3sg8_A 193 LIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKYWS 272 (304)
T ss_dssp EECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHH
T ss_pred eEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHH
Confidence 799999999999987 455789999987654332211111111 22322211 00 011257899
Q ss_pred HHHHHHHHhhCCCCC
Q 019495 87 FGTLLLDLLSGKHIP 101 (340)
Q Consensus 87 ~G~il~el~~g~~~~ 101 (340)
++.++|.+.+|..++
T Consensus 273 l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 273 FEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHcCCHHH
Confidence 999999999998654
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=8.9e-05 Score=63.20 Aligned_cols=74 Identities=12% Similarity=-0.039 Sum_probs=59.6
Q ss_pred hcCCCcchHHhhhhHHHHHh-----cC------ChHHHHHHHHHHhhhCCC--chHHHHHHHHHHHHc-----CChHHHH
Q 019495 259 DAGTMVSPTVYARRSLCYLM-----SD------MPQDALNDAMQAQIISPI--WHIASYLQAAALSAM-----GMENEAQ 320 (340)
Q Consensus 259 ~~~p~~~~~~~~~~~~~~~~-----~~------~~~~A~~~~~~al~~~p~--~~~a~~~~g~~~~~~-----~~~~~A~ 320 (340)
+.+|+ +...++..|..... .+ ....|...+++|+++||+ +..+|..+|.+|... |+.++|.
T Consensus 146 ~~~~~-dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~ 224 (301)
T 3u64_A 146 RCTRV-DVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAH 224 (301)
T ss_dssp TCCGG-GHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHH
T ss_pred HcCcc-ccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHH
Confidence 45566 66666666665533 12 345799999999999999 566999999999996 9999999
Q ss_pred HHHHhhhcccccc
Q 019495 321 VALKEGTTLEAKK 333 (340)
Q Consensus 321 ~~~~~al~l~p~~ 333 (340)
++|++||+++|+.
T Consensus 225 ~~ferAL~LnP~~ 237 (301)
T 3u64_A 225 TAFEHLTRYCSAH 237 (301)
T ss_dssp HHHHHHHHHCCTT
T ss_pred HHHHHHHHhCCCC
Confidence 9999999999974
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=97.74 E-value=6.4e-05 Score=66.61 Aligned_cols=70 Identities=16% Similarity=0.074 Sum_probs=60.4
Q ss_pred HHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHH
Q 019495 232 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS 303 (340)
Q Consensus 232 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 303 (340)
..+...|..++..|++++|+..+++|+.++|+ +..|..+|.++...|++++|++.|++|+.++|.....+
T Consensus 278 ~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s--~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~~ 347 (372)
T 3ly7_A 278 IIYQIKAVSALVKGKTDESYQAINTGIDLEMS--WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLY 347 (372)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC--HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChHH
Confidence 34455666677789999999999999999976 57788899999999999999999999999999986433
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00011 Score=67.39 Aligned_cols=88 Identities=11% Similarity=-0.076 Sum_probs=69.4
Q ss_pred hHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHh-----cCCCc--chHHhhhhHHHHHhcCChHHHHHHHHHHhhh---
Q 019495 226 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFID-----AGTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQII--- 295 (340)
Q Consensus 226 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-----~~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--- 295 (340)
+....+..+.+.|..+..+|+|++|+..|+++|+ ++|++ -...++++|.+|..+|++++|+..+++|+++
T Consensus 324 ~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~ 403 (429)
T 3qwp_A 324 INIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRV 403 (429)
T ss_dssp TSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 3345566778889999999999999999999985 34442 4577889999999999999999999999977
Q ss_pred --CCCc---hHHHHHHHHHHHHc
Q 019495 296 --SPIW---HIASYLQAAALSAM 313 (340)
Q Consensus 296 --~p~~---~~a~~~~g~~~~~~ 313 (340)
-|++ .+.+.+++.+...+
T Consensus 404 ~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 404 THGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HTCTTSHHHHHHHHHHHHHHHHH
T ss_pred hcCCCChHHHHHHHHHHHHHHHH
Confidence 2444 45566777776554
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00017 Score=66.00 Aligned_cols=70 Identities=10% Similarity=0.038 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHh-----cCCCc--chHHhhhhHHHHHhcCChHHHHHHHHHHhhhC
Q 019495 227 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFID-----AGTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQIIS 296 (340)
Q Consensus 227 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-----~~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 296 (340)
....+..+.+.|..+..+|+|++|+..|+++|+ ++|++ -...++++|.+|..+|+|++|+..+++|+++.
T Consensus 336 Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~ 412 (433)
T 3qww_A 336 NVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIM 412 (433)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 345666778899999999999999999999995 34442 45778899999999999999999999999873
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00064 Score=50.36 Aligned_cols=78 Identities=12% Similarity=-0.041 Sum_probs=62.9
Q ss_pred HHHHHHHhHHhhhcCHHH---HHHHHHHHHhcC-CCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHH
Q 019495 232 LNSKKKGDVAFRQKDLKD---AIECYTQFIDAG-TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 307 (340)
Q Consensus 232 ~~~~~~a~~~~~~~~~~~---A~~~~~~al~~~-p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 307 (340)
...++.|-.+....+-.+ +|..++..++.+ |...-.+.+.+|..++++|+|.+|+..++..|++.|++.+|.--+.
T Consensus 36 ~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~ 115 (126)
T 1nzn_A 36 STQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELER 115 (126)
T ss_dssp HHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 445666666666555544 999999999988 6336788888999999999999999999999999999999876554
Q ss_pred HH
Q 019495 308 AA 309 (340)
Q Consensus 308 ~~ 309 (340)
.+
T Consensus 116 ~i 117 (126)
T 1nzn_A 116 LI 117 (126)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00054 Score=50.93 Aligned_cols=66 Identities=6% Similarity=-0.148 Sum_probs=57.1
Q ss_pred hcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH
Q 019495 244 QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 309 (340)
Q Consensus 244 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 309 (340)
..+...+|..++..++.+|...-++++.+|..+.++|+|.+|.+.++..|++.|++.+|.--...+
T Consensus 56 ~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~I 121 (134)
T 3o48_A 56 VNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 121 (134)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Confidence 346678999999999999864678888899999999999999999999999999999887655444
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00027 Score=63.07 Aligned_cols=53 Identities=9% Similarity=0.049 Sum_probs=43.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHhC---------------------------------------------------------C
Q 019495 2 KWAMRLRVVLHLAQALEYCTSK---------------------------------------------------------G 24 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~---------------------------------------------------------~ 24 (340)
+...+..++.+++..|..||+. .
T Consensus 137 ~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 216 (359)
T 3dxp_A 137 SPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLT 216 (359)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCC
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCc
Confidence 4567788999999999999972 1
Q ss_pred CccccCCCCCCEEecCCCC--eEEeccCCCcc
Q 019495 25 RALYHDLNAYRILFDEDGN--PRLSTFGLMKN 54 (340)
Q Consensus 25 ~iiH~dlk~~nill~~~~~--~kl~dfg~~~~ 54 (340)
.++|+|+++.||+++.++. +.|+||+.+..
T Consensus 217 ~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 217 SIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp EEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred eEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 2899999999999987753 58999998754
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0013 Score=49.51 Aligned_cols=76 Identities=5% Similarity=-0.174 Sum_probs=61.1
Q ss_pred HHHHHhHHhh---hcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH
Q 019495 234 SKKKGDVAFR---QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 309 (340)
Q Consensus 234 ~~~~a~~~~~---~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 309 (340)
.|+.|-.+.. ..+-.++|..++..++.+|...-++.+.+|..++++|+|.+|.++++..|++.|++.+|.--+..+
T Consensus 42 ~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~I 120 (144)
T 1y8m_A 42 RFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 120 (144)
T ss_dssp HHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 3444444443 345568999999999998865778888899999999999999999999999999998886654443
|
| >4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A | Back alignment and structure |
|---|
Probab=97.15 E-value=0.003 Score=61.19 Aligned_cols=99 Identities=7% Similarity=-0.086 Sum_probs=78.8
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHhc-CCCcchHHhhhhHHHHHhcC-ChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFIDA-GTMVSPTVYARRSLCYLMSD-MPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~~-~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
.|...++.....|+.+.|...|.+|++. .+. ...+|...|..-...+ +++.|.+.|+++++..|+++..|...+...
T Consensus 436 vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~-~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe 514 (679)
T 4e6h_A 436 VYCVYMNTMKRIQGLAASRKIFGKCRRLKKLV-TPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFL 514 (679)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGS-CTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCC-ChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHH
Confidence 3455555556678889999999999987 333 4566776666665654 488999999999999999998888888888
Q ss_pred HHcCChHHHHHHHHhhhccccc
Q 019495 311 SAMGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~ 332 (340)
...|+.+.|...|++|++..|.
T Consensus 515 ~~~~~~~~AR~lferal~~~~~ 536 (679)
T 4e6h_A 515 IYVNEESQVKSLFESSIDKISD 536 (679)
T ss_dssp HHHTCHHHHHHHHHHHTTTSSS
T ss_pred HhCCCHHHHHHHHHHHHHhcCC
Confidence 8899999999999999988873
|
| >2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0067 Score=54.65 Aligned_cols=101 Identities=9% Similarity=-0.035 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCc--------ch-------------HHhhhhHHHHHhcCChHHHH
Q 019495 228 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--------SP-------------TVYARRSLCYLMSDMPQDAL 286 (340)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--------~~-------------~~~~~~~~~~~~~~~~~~A~ 286 (340)
......+...|......|+.++|++.+.+|+.+-... .+ .+...++..++..|++.+|+
T Consensus 112 ~~~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~ 191 (388)
T 2ff4_A 112 LGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVI 191 (388)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 3445566667777777899999999999998764221 00 12234556777899999999
Q ss_pred HHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhc
Q 019495 287 NDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTT 328 (340)
Q Consensus 287 ~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ 328 (340)
..+.+++..+|-+-.+|..+-.+|+..|+..+|++.|+++-+
T Consensus 192 ~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 192 AELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988643
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0003 Score=59.65 Aligned_cols=28 Identities=14% Similarity=0.107 Sum_probs=23.8
Q ss_pred ccccCCCCCCEEecCCCCeEEeccCCCc
Q 019495 26 ALYHDLNAYRILFDEDGNPRLSTFGLMK 53 (340)
Q Consensus 26 iiH~dlk~~nill~~~~~~kl~dfg~~~ 53 (340)
++|+|++|.||+++.++.+.|+||+.+.
T Consensus 185 l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 185 FSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp EECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred EECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 8999999999999876556799998753
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0043 Score=50.55 Aligned_cols=127 Identities=11% Similarity=0.024 Sum_probs=78.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHh-CCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCccccCCcccCcccccCCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVT 79 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~-~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 79 (340)
|++.+...++.|.+.+|.-+-. +. -..+=+.|..|++..+|.|...+ +.+ ......+.+||... ...+
T Consensus 46 lsEEqaWALc~Qc~~~L~~~~~~~~-~~~~i~~~~~i~l~~dG~V~f~~-~~s--------~~~~~~~~~pe~~~-~~~t 114 (229)
T 2yle_A 46 INEEQAWAVCYQCCGSLRAAARRRQ-PRHRVRSAAQIRVWRDGAVTLAP-AAD--------DAGEPPPVAGKLGY-SQCM 114 (229)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCSGGGEEEETTSCEEECC-C--------------------CCSS-SSSC
T ss_pred cCHHHHHHHHHHHHHHHHhhhhccc-CCceecCCcceEEecCCceeccc-ccc--------cccccCCCChhhcc-ccch
Confidence 5677888899998888766521 22 12334557899999999886663 211 11233567888875 3446
Q ss_pred CCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhcc---------------
Q 019495 80 PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY--------------- 144 (340)
Q Consensus 80 ~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~--------------- 144 (340)
.+.-|||+|+++|..+.-+.+... +...++++.+||..|.+.
T Consensus 115 e~~~IysLG~tLY~ALDygL~e~e-----------------------E~eLS~~LE~LL~~Mt~~~~d~~~~DeG~~~~~ 171 (229)
T 2yle_A 115 ETEVIESLGIIIYKALDYGLKENE-----------------------ERELSPPLEQLIDHMANTVEADGSNDEGYEAAE 171 (229)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCTTE-----------------------EECCCHHHHHHHHHHTTCCC-------------
T ss_pred HHHHHHHHHHHHHHHhhcCCCccc-----------------------chhhCHHHHHHHHHHHhcccccccccccccccc
Confidence 677899999999998865433211 122346788888888755
Q ss_pred ----------CCCCCCCHHHHHHHhcc
Q 019495 145 ----------EPRERPNPKSLVTALSP 161 (340)
Q Consensus 145 ----------~p~~Rps~~~i~~~L~~ 161 (340)
.+..|+++++|++.-..
T Consensus 172 eg~~d~~~~~~~~~~~sl~~Vi~~C~~ 198 (229)
T 2yle_A 172 EGLGDEDEKRKISAIRSYRDVMKLCAA 198 (229)
T ss_dssp -------CCSCCCCCCSHHHHHHHHHT
T ss_pred cccccccccccccCcCCHHHHHHHHHh
Confidence 34678888888865544
|
| >4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0022 Score=62.07 Aligned_cols=82 Identities=7% Similarity=-0.023 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHH-HHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHh
Q 019495 247 LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDAL-NDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 325 (340)
Q Consensus 247 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~-~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~ 325 (340)
.+.....|+++|...|. .+.+|...+..+...|+..+|+ +.+++|+...|.....|+..+......|++++|...|++
T Consensus 325 ~~Rv~~~Ye~aL~~~p~-~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek 403 (679)
T 4e6h_A 325 KARMTYVYMQAAQHVCF-APEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILS 403 (679)
T ss_dssp HHHHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 34567889999999999 8999999999999999999997 999999999999999999999999999999999999999
Q ss_pred hhcc
Q 019495 326 GTTL 329 (340)
Q Consensus 326 al~l 329 (340)
+++.
T Consensus 404 ~l~~ 407 (679)
T 4e6h_A 404 CIDR 407 (679)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9985
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00038 Score=58.71 Aligned_cols=28 Identities=11% Similarity=0.054 Sum_probs=24.5
Q ss_pred ccccCCCCCCEEecCCCCeEEeccCCCc
Q 019495 26 ALYHDLNAYRILFDEDGNPRLSTFGLMK 53 (340)
Q Consensus 26 iiH~dlk~~nill~~~~~~kl~dfg~~~ 53 (340)
++|+|++|.||+++.++.+.|+||+.+.
T Consensus 186 l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 186 VTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp EECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred EECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 8999999999999877666799999754
|
| >4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0073 Score=45.86 Aligned_cols=113 Identities=14% Similarity=0.012 Sum_probs=81.6
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcc-------hHHhhhhHHHHHhcCChHHHHHHH
Q 019495 217 NELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS-------PTVYARRSLCYLMSDMPQDALNDA 289 (340)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-------~~~~~~~~~~~~~~~~~~~A~~~~ 289 (340)
.+..|+.|-..+...+.. |+-+.+ +-.+.-++.|++|+..-|-.. ..+|.+.|.. ..+++.++|.+.|
T Consensus 9 ~p~~yd~W~~yl~llE~~---g~p~~d-~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy 83 (161)
T 4h7y_A 9 MANNPEDWLSLLLKLEKN---SVPLSD-ALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYF 83 (161)
T ss_dssp -CCSHHHHHHHHHHHHHH---TCSCCH-HHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHH
T ss_pred CCCCHHHHHHHHHHHHHc---CCCchh-hHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHH
Confidence 344455665555544432 222111 223777889999998777521 2334444433 5568999999999
Q ss_pred HHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhccccccc
Q 019495 290 MQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 290 ~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
+.++++...+++.|...|..-..+|+.+.|...+.+|+.+.|+..
T Consensus 84 ~~a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~ 128 (161)
T 4h7y_A 84 QMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPL 128 (161)
T ss_dssp HHHHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcH
Confidence 999999889999999999999999999999999999999999754
|
| >3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0067 Score=46.98 Aligned_cols=82 Identities=17% Similarity=0.112 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcC---CCc---------------------chHHhhhhHHHHHhcCChH
Q 019495 228 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAG---TMV---------------------SPTVYARRSLCYLMSDMPQ 283 (340)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~---p~~---------------------~~~~~~~~~~~~~~~~~~~ 283 (340)
......+.-.|+.+|..++|..|...|++||+.. +.. +.++.++.+.||.++++++
T Consensus 60 ~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~ 139 (167)
T 3ffl_A 60 PQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDK 139 (167)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHH
Confidence 3455677889999999999999999999987421 110 2368889999999999999
Q ss_pred HHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 284 DALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 284 ~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
+|+..++..=.- -..++...-+|..|
T Consensus 140 ~Ai~~Le~Ip~k-~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 140 DAIAILDGIPSR-QRTPKINMLLANLY 165 (167)
T ss_dssp HHHHHHHTSCGG-GCCHHHHHHHHHHC
T ss_pred HHHHHHhcCCch-hcCHHHHHHHHHHh
Confidence 999998764111 12344444445443
|
| >4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0069 Score=58.89 Aligned_cols=82 Identities=12% Similarity=-0.055 Sum_probs=63.6
Q ss_pred cCHHHHHHHHHHHHhc--------CCCc---------chHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHH
Q 019495 245 KDLKDAIECYTQFIDA--------GTMV---------SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 307 (340)
Q Consensus 245 ~~~~~A~~~~~~al~~--------~p~~---------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 307 (340)
.+--+|++...++++. .+.+ ...+...-+.-++..|+|+-|++..++|+..-|.....|+.++
T Consensus 299 ~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La 378 (754)
T 4gns_B 299 TKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLA 378 (754)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHH
Confidence 3455677777777642 2221 1123333455566789999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHhh
Q 019495 308 AALSAMGMENEAQVALKEG 326 (340)
Q Consensus 308 ~~~~~~~~~~~A~~~~~~a 326 (340)
.+|..+|+|+.|+-.++-+
T Consensus 379 ~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 379 RCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHhccHHHHHHHHhcC
Confidence 9999999999999999887
|
| >1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1 | Back alignment and structure |
|---|
Probab=96.41 E-value=0.038 Score=46.35 Aligned_cols=95 Identities=13% Similarity=0.008 Sum_probs=78.4
Q ss_pred HhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHH--HHH----------
Q 019495 238 GDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIA--SYL---------- 305 (340)
Q Consensus 238 a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a--~~~---------- 305 (340)
...+++.|+.++|++.....|+.+|. +......+-..+.-.|+++.|++.++.+.+++|+.... .|+
T Consensus 4 ~~~ll~~g~L~~al~~~~~~VR~~P~-da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI~aE~~R~ 82 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIKASPK-DASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQARK 82 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhCCc-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHHHHHHHHH
Confidence 45688999999999999999999999 88888888999999999999999999999999986433 221
Q ss_pred -----------------------HHHHHHHcCChHHHHHHHHhhhcccccc
Q 019495 306 -----------------------QAAALSAMGMENEAQVALKEGTTLEAKK 333 (340)
Q Consensus 306 -----------------------~g~~~~~~~~~~~A~~~~~~al~l~p~~ 333 (340)
.+......|+.++|.+.-.+|++.-|..
T Consensus 83 ~vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~ap~~ 133 (273)
T 1zbp_A 83 DFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEK 133 (273)
T ss_dssp HHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCC
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhcCccc
Confidence 2444555688888888888888877653
|
| >3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi} | Back alignment and structure |
|---|
Probab=96.23 E-value=0.05 Score=42.11 Aligned_cols=92 Identities=13% Similarity=-0.039 Sum_probs=70.4
Q ss_pred HHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHh--hh---------------CC
Q 019495 235 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQ--II---------------SP 297 (340)
Q Consensus 235 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al--~~---------------~p 297 (340)
.-.+-.++-.|+|..|+-.+ ..++. .+..+..+.||.++++|..|+...+..+ ++ ||
T Consensus 37 lL~~I~LyyngEY~R~Lf~L---~~lNT---~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~ 110 (242)
T 3kae_A 37 MLMSIVLYLNGEYTRALFHL---HKLNT---CTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDP 110 (242)
T ss_dssp HHHHHHHHHTTCHHHHHHHH---HTCCB---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCT
T ss_pred hhhhhhhhhcchHhHHHHHH---Hhcch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeecc
Confidence 44566678899999888743 34433 2344445999999999999999999998 33 35
Q ss_pred CchHHHHH-HHHHHHHcCChHHHHHHHHhhhccccc
Q 019495 298 IWHIASYL-QAAALSAMGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 298 ~~~~a~~~-~g~~~~~~~~~~~A~~~~~~al~l~p~ 332 (340)
.+-+..+. +|..+.++|.-+||+.+|......+|-
T Consensus 111 ~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~l 146 (242)
T 3kae_A 111 GDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFL 146 (242)
T ss_dssp TCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred chHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccc
Confidence 66666555 599999999999999999998887764
|
| >1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1 | Back alignment and structure |
|---|
Probab=95.68 E-value=0.027 Score=47.23 Aligned_cols=61 Identities=20% Similarity=-0.030 Sum_probs=57.0
Q ss_pred HHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhccccccc
Q 019495 274 LCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 274 ~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
.-+++.|..++|++.+...++.+|.+...-..+-..|+..|+|+.|...++-+.+++|+..
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~ 65 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYL 65 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhh
Confidence 4567789999999999999999999999999999999999999999999999999999854
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=95.64 E-value=0.013 Score=51.47 Aligned_cols=30 Identities=10% Similarity=0.087 Sum_probs=26.4
Q ss_pred CCCccccCCCCCCEEecCCCCeEEeccCCCc
Q 019495 23 KGRALYHDLNAYRILFDEDGNPRLSTFGLMK 53 (340)
Q Consensus 23 ~~~iiH~dlk~~nill~~~~~~kl~dfg~~~ 53 (340)
.. ++|+|+.+.||+++.++.+.|+||+.+.
T Consensus 222 ~~-l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 222 PN-LCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp CC-EECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred Cc-eecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 35 9999999999999888889999999754
|
| >4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A | Back alignment and structure |
|---|
Probab=95.34 E-value=0.19 Score=46.67 Aligned_cols=93 Identities=10% Similarity=-0.011 Sum_probs=76.8
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHhcC--CCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhh--CCCchHHHHHHHH
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFIDAG--TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII--SPIWHIASYLQAA 308 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--~p~~~~a~~~~g~ 308 (340)
.+......+.+.|++++|.+.|++..+.+ |+ ...|..+-..|.+.|+.++|.+.+++-.+. .|+ ...|..+-.
T Consensus 107 tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd--~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd-~~ty~~Li~ 183 (501)
T 4g26_A 107 TFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPR--LRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPE-EPELAALLK 183 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCC-HHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCc--cceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCC-HHHHHHHHH
Confidence 44556677888999999999999988764 55 567888888999999999999999998765 344 567888888
Q ss_pred HHHHcCChHHHHHHHHhhhc
Q 019495 309 ALSAMGMENEAQVALKEGTT 328 (340)
Q Consensus 309 ~~~~~~~~~~A~~~~~~al~ 328 (340)
+|...|+.++|.+.|++.-+
T Consensus 184 ~~~~~g~~d~A~~ll~~Mr~ 203 (501)
T 4g26_A 184 VSMDTKNADKVYKTLQRLRD 203 (501)
T ss_dssp HHHHTTCHHHHHHHHHHHHH
T ss_pred HHhhCCCHHHHHHHHHHHHH
Confidence 99999999999999988654
|
| >4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.28 E-value=0.028 Score=54.72 Aligned_cols=59 Identities=10% Similarity=0.021 Sum_probs=52.0
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHH
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQA 292 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 292 (340)
-+..+++-+..+|+|+.|+++-++|+...|+ +...|+.++.||..+|+|+.|+--+.-.
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPs-eF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALD-SFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCch-hhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 4556677788999999999999999999999 8999999999999999999998655543
|
| >2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B | Back alignment and structure |
|---|
Probab=95.14 E-value=0.14 Score=47.45 Aligned_cols=93 Identities=12% Similarity=0.059 Sum_probs=67.5
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcC-ChHHHHHHHHHHhhhCCCchHHHHHHHHHHH
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD-MPQDALNDAMQAQIISPIWHIASYLQAAALS 311 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 311 (340)
-+..-+......++.+.|...|.+| +. |......|...|..-...+ +.+.|.+.|+.+++..|+.+..+...+....
T Consensus 288 lw~~y~~~~~r~~~~~~AR~i~~~A-~~-~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~ 365 (493)
T 2uy1_A 288 LRINHLNYVLKKRGLELFRKLFIEL-GN-EGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLL 365 (493)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHH-TT-SCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh-hC-CCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 3444444455667788899999988 43 3324556665565555444 5888999999999888888887777777778
Q ss_pred HcCChHHHHHHHHhhh
Q 019495 312 AMGMENEAQVALKEGT 327 (340)
Q Consensus 312 ~~~~~~~A~~~~~~al 327 (340)
.+|+.+.|...|+++.
T Consensus 366 ~~~~~~~aR~l~er~~ 381 (493)
T 2uy1_A 366 RIGDEENARALFKRLE 381 (493)
T ss_dssp HHTCHHHHHHHHHHSC
T ss_pred HcCCHHHHHHHHHHHH
Confidence 8888888888888873
|
| >2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B | Back alignment and structure |
|---|
Probab=94.94 E-value=0.17 Score=47.04 Aligned_cols=87 Identities=10% Similarity=-0.063 Sum_probs=55.3
Q ss_pred cCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCC---------hHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCC
Q 019495 245 KDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM---------PQDALNDAMQAQIISPIWHIASYLQAAALSAMGM 315 (340)
Q Consensus 245 ~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~---------~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~ 315 (340)
..|..|...|..+....+..+...|...... ..++ ...+...|++++...|..++.|+..+..+...|+
T Consensus 151 ~~y~~ar~~y~~~~~~~~~~s~~~W~~y~~~--E~~~~~~~~~~~~~~Rv~~~ye~al~~~p~~~~lW~~ya~~~~~~~~ 228 (493)
T 2uy1_A 151 PIFQSSFQRYQQIQPLIRGWSVKNAARLIDL--EMENGMKLGGRPHESRMHFIHNYILDSFYYAEEVYFFYSEYLIGIGQ 228 (493)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSHHHHHHHHHH--HHTCTTCCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHH--HhcCCccCcchhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCC
Confidence 4555566666665544332223344332222 1121 3446678888888888888888888888888888
Q ss_pred hHHHHHHHHhhhccccccc
Q 019495 316 ENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 316 ~~~A~~~~~~al~l~p~~~ 334 (340)
.++|...|++|++. |.+.
T Consensus 229 ~~~ar~i~erAi~~-P~~~ 246 (493)
T 2uy1_A 229 KEKAKKVVERGIEM-SDGM 246 (493)
T ss_dssp HHHHHHHHHHHHHH-CCSS
T ss_pred HHHHHHHHHHHHhC-CCcH
Confidence 88888888888887 7654
|
| >3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A | Back alignment and structure |
|---|
Probab=94.80 E-value=0.14 Score=45.82 Aligned_cols=94 Identities=11% Similarity=-0.094 Sum_probs=72.1
Q ss_pred HHHHhHHhhhcCHHHHHHHHHHHHhcCCC-----cchHHhhhhHHHHHhcCChHHHHHHHHHHhhhC----C-CchHHH-
Q 019495 235 KKKGDVAFRQKDLKDAIECYTQFIDAGTM-----VSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS----P-IWHIAS- 303 (340)
Q Consensus 235 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~-----~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~----p-~~~~a~- 303 (340)
...|..++..|+|.+|++.+++.++.-.. .--+.+..-...|..++++.++...+.+|.... + -...+.
T Consensus 103 ~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i 182 (394)
T 3txn_A 103 ARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGAL 182 (394)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHH
Confidence 36788999999999999999998763222 123566667888999999999999999987553 1 112343
Q ss_pred -HHHHHHHH-HcCChHHHHHHHHhhhc
Q 019495 304 -YLQAAALS-AMGMENEAQVALKEGTT 328 (340)
Q Consensus 304 -~~~g~~~~-~~~~~~~A~~~~~~al~ 328 (340)
..-|.++. ..++|++|..+|-.+++
T Consensus 183 ~~~~Gi~~l~~~rdyk~A~~~F~eaf~ 209 (394)
T 3txn_A 183 DLQSGILHAADERDFKTAFSYFYEAFE 209 (394)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHhccCHHHHHHHHHHHHh
Confidence 33488999 89999999999988863
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=94.39 E-value=0.053 Score=46.93 Aligned_cols=29 Identities=17% Similarity=0.119 Sum_probs=24.2
Q ss_pred ccccCCCCCCEEecC---CCCe-EEeccCCCcc
Q 019495 26 ALYHDLNAYRILFDE---DGNP-RLSTFGLMKN 54 (340)
Q Consensus 26 iiH~dlk~~nill~~---~~~~-kl~dfg~~~~ 54 (340)
++|+|+++.||+++. ++.+ .|+||+.+..
T Consensus 192 ~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 192 LIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp EECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred eEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 799999999999987 4554 7999997654
|
| >1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=93.88 E-value=0.32 Score=45.06 Aligned_cols=79 Identities=14% Similarity=0.010 Sum_probs=68.4
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHH
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 312 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 312 (340)
-+...|+.+.-...+..|...|.+|+.+.|+ +...|+.+|.+....|+.-+|+=+|-+++-...-++.|.-++...+..
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~-~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPS-NGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-BSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCC-CCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 3455677776677789999999999999999 899999999999999999999999999998877788888888877764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 340 | ||||
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 2e-23 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 5e-23 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 1e-22 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 3e-22 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 1e-21 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 1e-21 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 1e-21 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 2e-21 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 2e-21 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 2e-21 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 3e-21 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 4e-21 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 4e-21 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 8e-21 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 1e-20 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 5e-20 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 7e-20 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 1e-19 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 3e-19 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 3e-19 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 3e-19 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 8e-19 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 8e-19 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 2e-18 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 4e-18 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 5e-18 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 5e-18 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 2e-17 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 4e-17 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 6e-17 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 2e-16 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 3e-16 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 5e-16 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 1e-15 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 2e-15 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 4e-15 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 9e-15 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 9e-15 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 2e-14 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 2e-14 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 3e-14 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 3e-14 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 4e-14 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 9e-14 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 3e-13 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 1e-12 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 3e-12 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 3e-12 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 4e-12 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 1e-11 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 1e-11 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 2e-11 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 3e-11 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 8e-11 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 8e-11 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-10 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 1e-09 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 4e-09 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 3e-08 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 2e-07 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 3e-07 | |
| d2c2la1 | 201 | a.118.8.1 (A:24-224) STIP1 homology and U box-cont | 3e-07 | |
| d2fbna1 | 153 | a.118.8.1 (A:22-174) Putative 70 kda peptidylproly | 6e-05 | |
| d1p5qa1 | 170 | a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal d | 7e-05 | |
| d1elra_ | 128 | a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9 | 3e-04 | |
| d1kt1a1 | 168 | a.118.8.1 (A:254-421) FKBP51, C-terminal domain {M | 3e-04 | |
| d1w3ba_ | 388 | a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, | 3e-04 | |
| d1hh8a_ | 192 | a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF- | 4e-04 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 4e-04 | |
| d1elwa_ | 117 | a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9 | 8e-04 |
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 95.9 bits (238), Expect = 2e-23
Identities = 35/177 (19%), Positives = 75/177 (42%), Gaps = 10/177 (5%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ + L + ++ A+EY K ++ DL A L E+ +++ FGL +
Sbjct: 112 VSAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 170
Query: 61 YST-----NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 115
+ + +T PE L + + +S +++FG LL ++ + P +DL +
Sbjct: 171 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM-SPYPGIDL---SQVY 226
Query: 116 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHV 172
L + + + ++ L C Q+ P +RP+ + A + +E+ + V
Sbjct: 227 ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 283
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.8 bits (235), Expect = 5e-23
Identities = 39/176 (22%), Positives = 70/176 (39%), Gaps = 10/176 (5%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
++ + + +A + Y ++ DL A IL E+ +++ FGL + D +
Sbjct: 110 LRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARLIEDNEY 168
Query: 61 YSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 115
+ + +T PE GR T +S ++SFG LL +L + +P + +R +
Sbjct: 169 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG----MVNREVL 224
Query: 116 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSH 171
+ + L L +C + EP ERP + L L TE
Sbjct: 225 DQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQ 280
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.5 bits (232), Expect = 1e-22
Identities = 36/178 (20%), Positives = 74/178 (41%), Gaps = 18/178 (10%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL--MKNSRDG 58
+ + + AQ ++Y +K ++ DL + I ED ++ FGL +K+ G
Sbjct: 101 FEMIKLIDIARQTAQGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 159
Query: 59 KSYSTNLAFTP----PEYLRT---GRVTPESVIYSFGTLLLDLLSGK----HIPPSHALD 107
L+ + PE +R + +S +Y+FG +L +L++G+ +I +
Sbjct: 160 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 219
Query: 108 LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 165
+ R S + + RL + CL+ + ERP ++ ++ L +
Sbjct: 220 FMVGRGYLSPDLSKVRSNCPK----AMKRLMAECLKKKRDERPLFPQILASIELLARS 273
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.1 bits (228), Expect = 3e-22
Identities = 31/169 (18%), Positives = 67/169 (39%), Gaps = 10/169 (5%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
L + L + + + Y ++ DL A L E+ ++S FG+ + D +
Sbjct: 98 FAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 156
Query: 61 YSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 115
S+ + + PE R + +S ++SFG L+ ++ S IP + + +
Sbjct: 157 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN----RSNSEVV 212
Query: 116 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 164
+ T + ++ + C + P +RP L+ L+ + +
Sbjct: 213 EDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 261
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 91.1 bits (225), Expect = 1e-21
Identities = 37/175 (21%), Positives = 72/175 (41%), Gaps = 21/175 (12%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ A +L + +A + Y + + ++ DL L E+ +++ FGL +N
Sbjct: 137 LSCAEQLCIARQVAAGMAYLSERKF-VHRDLATRNCLVGENMVVKIADFGLSRNIYSADY 195
Query: 61 YSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLI 109
Y + + + PPE + R T ES ++++G +L ++ S P + +
Sbjct: 196 YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYV 255
Query: 110 RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 164
RD N+ ++C EL L C P +RP+ S+ L + +
Sbjct: 256 RDGNILACPENCPL---------ELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 301
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.1 bits (223), Expect = 1e-21
Identities = 36/164 (21%), Positives = 69/164 (42%), Gaps = 10/164 (6%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ L + + +A+EY SK L+ DL A L ++ G ++S FGL + D +
Sbjct: 97 FQTQQLLEMCKDVCEAMEYLESKQF-LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 155
Query: 61 YSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 115
S+ + ++PPE L + + +S I++FG L+ ++ S +P +
Sbjct: 156 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER----FTNSETA 211
Query: 116 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 159
L ++ + C + ERP K L++ +
Sbjct: 212 EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI 255
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.1 bits (223), Expect = 1e-21
Identities = 37/170 (21%), Positives = 66/170 (38%), Gaps = 16/170 (9%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN-SRDGK 59
+ L+ L + +A+EY ++ DL A +L ED ++S FGL K S
Sbjct: 100 LGGDCLLKFSLDVCEAMEYLEGNNF-VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 158
Query: 60 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNL 114
+ + +T PE LR + + +S ++SFG LL ++ S +P + +
Sbjct: 159 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK 218
Query: 115 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 164
D C + + C + RP+ L L ++
Sbjct: 219 MDAPDGCPP---------AVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 259
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.6 bits (224), Expect = 2e-21
Identities = 35/166 (21%), Positives = 66/166 (39%), Gaps = 12/166 (7%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGK 59
+ + L +A+ +E+ K H DL A +L ++ FGL ++
Sbjct: 161 LTFEDLLCFAYQVAKGMEFLEFKS--CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDS 218
Query: 60 SYSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 113
+Y + + PE L G T +S ++S+G LL ++ S P + D N
Sbjct: 219 NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP---GIPVDAN 275
Query: 114 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 159
L + + E+ + C ++ R+RP+ +L + L
Sbjct: 276 FYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 321
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.7 bits (222), Expect = 2e-21
Identities = 38/177 (21%), Positives = 73/177 (41%), Gaps = 20/177 (11%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ L + +A+ + + + ++ DL A IL + + +++ FGL + D +
Sbjct: 106 LTINKLLDMAAQIAEGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164
Query: 61 YSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIR 110
+ + +T PE + G T +S ++SFG LL ++++ IP + +
Sbjct: 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 224
Query: 111 DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 167
+ D+C E EL +L C + P +RP L + L TE
Sbjct: 225 RGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.6 bits (224), Expect = 2e-21
Identities = 25/173 (14%), Positives = 64/173 (36%), Gaps = 11/173 (6%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ L + +A+ + Y + ++ DL A +L + +++ FGL K +
Sbjct: 108 IGSQYLLNWCVQIAKGMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 166
Query: 61 YSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL 114
+ + E + T +S ++S+G + +L++ P D I +
Sbjct: 167 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY----DGIPASEI 222
Query: 115 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 167
+ + ++ + +C + RP + L+ S + ++ +
Sbjct: 223 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ 275
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.3 bits (221), Expect = 3e-21
Identities = 34/158 (21%), Positives = 62/158 (39%), Gaps = 9/158 (5%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ LA AL YC SK ++ D+ +L G +++ FG ++ +
Sbjct: 103 FDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 161
Query: 61 YSTN--LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 118
+ L + PPE + + ++S G L + L GK ++ R +
Sbjct: 162 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--- 218
Query: 119 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156
+E F D L SR L++ P +RP + ++
Sbjct: 219 ---VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 253
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.4 bits (221), Expect = 4e-21
Identities = 33/183 (18%), Positives = 65/183 (35%), Gaps = 22/183 (12%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+K + +V ++ ++Y ++ DL A +L ++S FGL K R ++
Sbjct: 104 VKDKNIIELVHQVSMGMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 162
Query: 61 YSTN-------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDL 108
Y + + PE + + + +S ++SFG L+ + S P S +
Sbjct: 163 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 222
Query: 109 IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 168
+ C E+ L + C Y+ RP ++ L +
Sbjct: 223 LEKGERMGCPAGCPR---------EMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 273
Query: 169 PSH 171
H
Sbjct: 274 EGH 276
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.3 bits (221), Expect = 4e-21
Identities = 35/168 (20%), Positives = 61/168 (36%), Gaps = 21/168 (12%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYH----DLNAYRILFDEDGNPRLSTFGLMKNSR 56
+ LRV+ L AL+ C + + DL + D N +L FGL +
Sbjct: 106 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN 165
Query: 57 DGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKH----IPPSHALDL 108
S++ TP PE + +S I+S G LL +L +
Sbjct: 166 HDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK 225
Query: 109 IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156
IR+ + + + EL + +R L + RP+ + ++
Sbjct: 226 IREGKFRRIPYRYSD---------ELNEIITRMLNLKDYHRPSVEEIL 264
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.1 bits (220), Expect = 8e-21
Identities = 34/171 (19%), Positives = 71/171 (41%), Gaps = 14/171 (8%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ L +A+ ++Y + K ++ DL A IL E+ +++ FGL +
Sbjct: 124 LSSQQLLHFAADVARGMDYLSQKQF-IHRDLAARNILVGENYVAKIADFGLSRGQEVYVK 182
Query: 61 YSTN---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML 117
+ + + E L T S ++S+G LL +++S P L
Sbjct: 183 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY-------CGMTCAEL 235
Query: 118 TDSCLEG---QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 165
+ +G + + E+ L +C + +P ERP+ ++ +L+ + +E
Sbjct: 236 YEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 286
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.4 bits (218), Expect = 1e-20
Identities = 33/168 (19%), Positives = 69/168 (41%), Gaps = 21/168 (12%)
Query: 3 WAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS 62
+ +++ +A + Y + ++ DL A + ED ++ FG+ ++ + Y
Sbjct: 132 LSKMIQMAGEIADGMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 190
Query: 63 TN------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRD 111
+ + PE L+ G T S ++SFG +L ++ + P L + +
Sbjct: 191 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 250
Query: 112 RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 159
L D+C + L L C QY P+ RP+ +++++
Sbjct: 251 GGLLDKPDNCPD---------MLFELMRMCWQYNPKMRPSFLEIISSI 289
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 86.7 bits (214), Expect = 5e-20
Identities = 32/173 (18%), Positives = 70/173 (40%), Gaps = 14/173 (8%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ ++ +A ++Y ++ DL A IL + + ++S FGL + D S
Sbjct: 125 FTVIQLVGMLRGIAAGMKYLADMNY-VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 183
Query: 61 YSTN---------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD 111
T + +T PE ++ + T S ++S+G ++ +++S P + +
Sbjct: 184 DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD----MTN 239
Query: 112 RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 164
+++ + D + L +L C Q + RP +V L + +
Sbjct: 240 QDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 292
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.1 bits (212), Expect = 7e-20
Identities = 37/168 (22%), Positives = 62/168 (36%), Gaps = 10/168 (5%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ + +A+ +E+ S+ ++ DL A IL E ++ FGL ++
Sbjct: 131 LTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 189
Query: 61 YSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL 114
Y L + PE + T +S ++SFG LL ++ S P + D
Sbjct: 190 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP---GVKIDEEF 246
Query: 115 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 162
+ D E+ + C EP +RP LV L L
Sbjct: 247 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 294
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.9 bits (209), Expect = 1e-19
Identities = 31/174 (17%), Positives = 69/174 (39%), Gaps = 12/174 (6%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ ++ +A ++Y + + DL A IL + + ++S FGL + D
Sbjct: 107 FSVLQLVGMLRGIAAGMKYLANMNYV-HRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 165
Query: 61 YSTN-------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 113
+ + +T PE + + T S ++SFG ++ ++++ P + +
Sbjct: 166 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE----LSNHE 221
Query: 114 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 167
+ + D + + +L +C Q E RP +V+ L L + +
Sbjct: 222 VMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 275
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.7 bits (209), Expect = 3e-19
Identities = 38/195 (19%), Positives = 69/195 (35%), Gaps = 40/195 (20%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ + +V + + + L Y K + ++ D+ IL + G +L FG+ D +
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 160
Query: 61 YST--NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH-IPPSHALDLIRDRNLQML 117
S ++ PE L+ + +S I+S G L+++ G++ IPP A +L Q+
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVE 220
Query: 118 TDSCLEGQFTDDDGT-------------------------------------ELVRLASR 140
D+ G E ++
Sbjct: 221 GDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNK 280
Query: 141 CLQYEPRERPNPKSL 155
CL P ER + K L
Sbjct: 281 CLIKNPAERADLKQL 295
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 84.7 bits (209), Expect = 3e-19
Identities = 31/159 (19%), Positives = 56/159 (35%), Gaps = 8/159 (5%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
++ V Q L Y S ++ D+ A IL E G +L FG S
Sbjct: 112 LQEVEIAAVTHGALQGLAYLHSHNM-IHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS 170
Query: 61 YSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML 117
+ + PE + G+ + ++S G ++L K + Q
Sbjct: 171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE 230
Query: 118 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156
+ + G +++ CLQ P++RP + L+
Sbjct: 231 SPALQSGHWSE----YFRNFVDSCLQKIPQDRPTSEVLL 265
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.4 bits (208), Expect = 3e-19
Identities = 38/176 (21%), Positives = 75/176 (42%), Gaps = 19/176 (10%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ L +A+ +++ SK ++ DL A + DE +++ FGL ++ D +
Sbjct: 127 PTVKDLIGFGLQVAKGMKFLASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 185
Query: 61 YSTN--------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR 112
S + + + E L+T + T +S ++SFG LL +L++ P D
Sbjct: 186 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP-------DV 238
Query: 113 NLQMLTDSCLEGQ---FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 165
N +T L+G+ + L + +C + RP+ LV+ +S +
Sbjct: 239 NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 294
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.7 bits (204), Expect = 8e-19
Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 8/160 (5%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILF-DEDGNPRLSTFGLMKNSRDG 58
MK + + + L++ ++ + H DL I G+ ++ GL R
Sbjct: 109 MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 168
Query: 59 KSYST--NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM 116
+ + F PE + +Y+FG +L++ + ++ P S + + +
Sbjct: 169 FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEY-PYSECQN--AAQIYRR 224
Query: 117 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156
+T F E+ + C++ ER + K L+
Sbjct: 225 VTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 264
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.3 bits (205), Expect = 8e-19
Identities = 33/172 (19%), Positives = 64/172 (37%), Gaps = 10/172 (5%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ L +A+ + + SK ++ DL A IL ++ FGL ++ ++ +
Sbjct: 142 LDLEDLLSFSYQVAKGMAFLASKNC-IHRDLAARNILLTHGRITKICDFGLARDIKNDSN 200
Query: 61 YSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL 114
Y + + PE + T ES ++S+G L +L S P + D
Sbjct: 201 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG---MPVDSKF 257
Query: 115 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 166
+ + E+ + C +P +RP K +V + E+
Sbjct: 258 YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 81.7 bits (201), Expect = 2e-18
Identities = 33/171 (19%), Positives = 62/171 (36%), Gaps = 22/171 (12%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ + ++ ++ ++Y K ++ DL A +L ++S FGL K S
Sbjct: 106 IPVSNVAELLHQVSMGMKYLEEKNF-VHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 164
Query: 61 YSTN-------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDL 108
Y T L + PE + + + S ++S+G + + LS P +
Sbjct: 165 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF 224
Query: 109 IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 159
I C EL L S C Y+ +RP+ ++ +
Sbjct: 225 IEQGKRMECPPECPP---------ELYALMSDCWIYKWEDRPDFLTVEQRM 266
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 81.2 bits (200), Expect = 4e-18
Identities = 29/164 (17%), Positives = 55/164 (33%), Gaps = 13/164 (7%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ + V AL Y ++ DL A ILF DG+ +L+ FG+ +
Sbjct: 107 LTESQIQVVCKQTLDALNYLHDNK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ 165
Query: 61 YST----NLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD 111
+ PE + ++ ++S G L+++ + PP H L+ +
Sbjct: 166 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE--PPHHELNPM-R 222
Query: 112 RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155
L++ + +CL+ R L
Sbjct: 223 VLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQL 266
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 81.0 bits (199), Expect = 5e-18
Identities = 26/202 (12%), Positives = 55/202 (27%), Gaps = 37/202 (18%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYH-------DLNAYRILFDEDGNPRLSTFGLMK 53
+ +++ L A L + + DL + IL ++G ++ GL
Sbjct: 97 VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156
Query: 54 NSRDGKSY----STNLAFTP----PEYLRT------GRVTPESVIYSFGTLLLDLLSGKH 99
+ T PE L + IY+ G + ++
Sbjct: 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCS 216
Query: 100 IPPSHAL----------------DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 143
I H ++ + Q L + + + + ++ C
Sbjct: 217 IGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWY 276
Query: 144 YEPRERPNPKSLVTALSPLQKE 165
R + LS L ++
Sbjct: 277 ANGAARLTALRIKKTLSQLSQQ 298
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.6 bits (198), Expect = 5e-18
Identities = 37/178 (20%), Positives = 67/178 (37%), Gaps = 20/178 (11%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ A + L+ AL Y SK ++ D+ A +L + +L FGL + D
Sbjct: 105 LDLASLILYAYQLSTALAYLESKRF-VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 163
Query: 61 YSTNLAFTPPEY-----LRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIR 110
Y + P ++ + R T S ++ FG + ++L P + + I
Sbjct: 164 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 223
Query: 111 DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 168
+ + +C L L ++C Y+P RP L LS + +E +
Sbjct: 224 NGERLPMPPNCPP---------TLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKA 272
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.9 bits (194), Expect = 2e-17
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 8/159 (5%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
M V QALE+ S ++ D+ + IL DG+ +L+ FG +S
Sbjct: 113 MDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171
Query: 61 YSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM 116
+ + TP PE + P+ I+S G + ++++ G+ PP + +R +
Sbjct: 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRALY-LI 228
Query: 117 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155
T+ E Q + +RCL + +R + K L
Sbjct: 229 ATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKEL 267
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.7 bits (191), Expect = 4e-17
Identities = 31/162 (19%), Positives = 52/162 (32%), Gaps = 11/162 (6%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
M R L + Y G + D+ +L DE N ++S FGL R
Sbjct: 100 MPEPDAQRFFHQLMAGVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNR 158
Query: 61 YSTN------LAFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRN 113
L + PE L+ E V ++S G +L +L+G+ + +
Sbjct: 159 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 218
Query: 114 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155
+ + D L+ + L P R +
Sbjct: 219 WKEKKTYLNPWKKIDSAPLALLH---KILVENPSARITIPDI 257
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.5 bits (190), Expect = 6e-17
Identities = 33/170 (19%), Positives = 62/170 (36%), Gaps = 11/170 (6%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
R + +A+ + Y SK ++ DL A +L ++ FGLM+
Sbjct: 108 FLLGTLSRYAVQVAEGMGYLESKRF-IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 166
Query: 61 YSTN-------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 113
+ A+ PE L+T + S + FG L ++ + P L +
Sbjct: 167 HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI---GLNGSQI 223
Query: 114 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 163
L + +D ++ + +C ++P +RP +L L Q
Sbjct: 224 LHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 273
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 76.3 bits (187), Expect = 2e-16
Identities = 31/164 (18%), Positives = 58/164 (35%), Gaps = 12/164 (7%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ +++ L + + + DL IL D+D N +L+ FG G+
Sbjct: 107 LSEKETRKIMRALLEVICALHKLNIV-HRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK 165
Query: 61 YST---NLAFTPPEYLRTGRV------TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD 111
++ PE + E ++S G ++ LL+G PP +
Sbjct: 166 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS--PPFWHRKQMLM 223
Query: 112 RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155
+ M + DD + L SR L +P++R +
Sbjct: 224 LRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEA 267
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 76.3 bits (187), Expect = 3e-16
Identities = 38/209 (18%), Positives = 66/209 (31%), Gaps = 19/209 (9%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF--DEDGNPRLSTFGLMKNSRDG 58
M + + + + L + ++ DL I+F +L FGL +
Sbjct: 121 MSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 179
Query: 59 KSYST---NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 115
+S F PE V + ++S G L LLSG P +
Sbjct: 180 QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL--SPFGGENDDETLRNV 237
Query: 116 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL-----VTALSPLQKETEVPS 170
D ++ + + L +P R +T + +++++PS
Sbjct: 238 KSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPS 297
Query: 171 HVLMGIPHS------ASVSPLSPLGEACS 193
I S A PL PLG +
Sbjct: 298 SRYTKIRDSIKTKYDAWPEPLPPLGRISN 326
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.9 bits (183), Expect = 5e-16
Identities = 38/168 (22%), Positives = 65/168 (38%), Gaps = 11/168 (6%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ + +A+ +EY SK ++ DL A +L ED +++ FGL ++
Sbjct: 132 LSSKDLVSCAYQVARGMEYLASKKC-IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 190
Query: 61 YSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL 114
Y + + PE L T +S ++SFG LL ++ + P + + L
Sbjct: 191 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG-SPYPGVPV---EEL 246
Query: 115 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 162
L + EL + C P +RP K LV L +
Sbjct: 247 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.4 bits (182), Expect = 1e-15
Identities = 34/157 (21%), Positives = 58/157 (36%), Gaps = 15/157 (9%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ + L++ SKG +Y DL IL D+DG+ +++ FG+ K + G +
Sbjct: 100 FDLSRATFYAAEIILGLQFLHSKGI-VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 158
Query: 61 YSTNLAFT----PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM 116
+ T PE L + +SFG LL ++L G+ ++ +
Sbjct: 159 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH--------GQDEEE 210
Query: 117 LTDSCLEGQFTDDDG--TELVRLASRCLQYEPRERPN 151
L S E L + EP +R
Sbjct: 211 LFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLG 247
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 72.9 bits (178), Expect = 2e-15
Identities = 30/157 (19%), Positives = 55/157 (35%), Gaps = 10/157 (6%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
M + V+ QAL + G ++ D+ I+ ++ FG+ + D +
Sbjct: 108 MTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 166
Query: 61 YSTNL-------AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 113
T + PE R V S +YS G +L ++L+G+ PP +
Sbjct: 167 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE--PPFTGDSPVSVAY 224
Query: 114 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150
+ D + +L + + L P R
Sbjct: 225 QHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRY 261
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.8 bits (178), Expect = 4e-15
Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 8/160 (5%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR--LSTFGLMKNSRDG 58
+ + V + +AL++ S + D+ I++ + + FG + + G
Sbjct: 99 LNEREIVSYVHQVCEALQFLHSHNIG-HFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157
Query: 59 KSYSTN---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 115
++ + PE + V+ + ++S GTL+ LLSG P A +
Sbjct: 158 DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGI--NPFLAETNQQIIENI 215
Query: 116 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155
M + + + + E + R L E + R
Sbjct: 216 MNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEA 255
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 72.1 bits (176), Expect = 9e-15
Identities = 36/153 (23%), Positives = 57/153 (37%), Gaps = 7/153 (4%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
A + LE+ ++ +Y DL IL DE G+ R+S GL + K
Sbjct: 104 FSEADMRFYAAEIILGLEHMHNRFV-VYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 162
Query: 61 YSTN--LAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML 117
+++ + PE L+ G + +S G +L LL G H + + L
Sbjct: 163 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 222
Query: 118 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150
T + + D EL L LQ + R
Sbjct: 223 TMAV---ELPDSFSPELRSLLEGLLQRDVNRRL 252
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 71.7 bits (175), Expect = 9e-15
Identities = 33/153 (21%), Positives = 57/153 (37%), Gaps = 12/153 (7%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-GK 59
+ + ALEY SK +Y DL IL D++G+ +++ FG K D
Sbjct: 101 FPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY 159
Query: 60 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 119
+ + PE + T +SFG L+ ++L+G D N +
Sbjct: 160 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFY--------DSNTMKTYE 211
Query: 120 SCLEGQFTDDDGT--ELVRLASRCLQYEPRERP 150
L + ++ L SR + + +R
Sbjct: 212 KILNAELRFPPFFNEDVKDLLSRLITRDLSQRL 244
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.5 bits (172), Expect = 2e-14
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 17/159 (10%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSRDG- 58
++ + + +A+ +C + G L+ D+ IL D + G +L FG +D
Sbjct: 107 LQEELARSFFWQVLEAVRHCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 165
Query: 59 -KSYSTNLAFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM 116
+ ++PPE++R R S ++S G LL D++ G P H ++IR +
Sbjct: 166 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI-PFEHDEEIIRGQVF-- 222
Query: 117 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155
F +E L CL P +RP + +
Sbjct: 223 ---------FRQRVSSECQHLIRWCLALRPSDRPTFEEI 252
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 70.4 bits (172), Expect = 2e-14
Identities = 30/160 (18%), Positives = 52/160 (32%), Gaps = 7/160 (4%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRA--LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 58
R++ + A++Y G N DED +S FGL K G
Sbjct: 104 YTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG 163
Query: 59 KSYST---NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 115
ST + PE L + +S G + LL G PP + + +
Sbjct: 164 SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY--PPFYDENDAKLFEQI 221
Query: 116 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155
+ + + + DD ++ +P +R +
Sbjct: 222 LKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQA 261
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.0 bits (171), Expect = 3e-14
Identities = 29/171 (16%), Positives = 59/171 (34%), Gaps = 17/171 (9%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 58
+ ALEY K ++ DL IL +ED + +++ FG K
Sbjct: 105 FDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 163
Query: 59 ----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL 114
S+ + PE L S +++ G ++ L++G PP R N
Sbjct: 164 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL--PP------FRAGNE 215
Query: 115 QMLTDSCLEGQFTDDDGT--ELVRLASRCLQYEPRERPNPKSLVTALSPLQ 163
++ ++ ++ + + L + L + +R + +
Sbjct: 216 YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKA 266
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.9 bits (170), Expect = 3e-14
Identities = 29/179 (16%), Positives = 57/179 (31%), Gaps = 25/179 (13%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ ++ L + L++ S ++ DL IL G +L+ FGL + +
Sbjct: 113 VPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 171
Query: 61 YSTN---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI----------------- 100
++ L + PE L ++S G + ++ K +
Sbjct: 172 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 231
Query: 101 ----PPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155
D+ R + +F D L +CL + P +R + S
Sbjct: 232 GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 70.1 bits (171), Expect = 4e-14
Identities = 28/160 (17%), Positives = 52/160 (32%), Gaps = 8/160 (5%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDGNPRLSTFGLMKNSRDG 58
M A + + + L++ ++ D+ I+ + + + ++ FGL
Sbjct: 124 MSEAEVINYMRQACEGLKHMHEHSI-VHLDIKPENIMCETKKASSVKIIDFGLATKLNPD 182
Query: 59 KS---YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 115
+ + F PE + V + +++ G L LLSG P D +
Sbjct: 183 EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGL--SPFAGEDDLETLQNV 240
Query: 116 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155
D + E LQ EPR+R
Sbjct: 241 KRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDA 280
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 68.7 bits (167), Expect = 9e-14
Identities = 24/182 (13%), Positives = 49/182 (26%), Gaps = 18/182 (9%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRL---STFGLMKNSRD 57
L + + +EY SK ++ D+ L L FGL K RD
Sbjct: 100 FSLKTVLLLADQMISRIEYIHSKNF-IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 158
Query: 58 GKSYSTN-----------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL 106
+++ + + + S G +L+ G
Sbjct: 159 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKA 218
Query: 107 DLIRDRNLQMLTD--SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL-SPLQ 163
R + ++ S +E + C ++P+ L +
Sbjct: 219 ATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 278
Query: 164 KE 165
++
Sbjct: 279 RQ 280
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.1 bits (163), Expect = 3e-13
Identities = 26/162 (16%), Positives = 51/162 (31%), Gaps = 10/162 (6%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR----LSTFGLMKNSR 56
+ + + + Y S A + DL I+ + P+ + FGL
Sbjct: 110 LTEEEATEFLKQILNGVYYLHSLQIA-HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 168
Query: 57 DGKSYSTNL---AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 113
G + F PE + + E+ ++S G + LLSG
Sbjct: 169 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 228
Query: 114 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155
+ + E ++ + R L +P++R +
Sbjct: 229 SAV--NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDS 268
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 65.2 bits (158), Expect = 1e-12
Identities = 17/183 (9%), Positives = 41/183 (22%), Gaps = 19/183 (10%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-----DGNPRLSTFGLMKNS 55
+ ++ K +Y D+ L + FG++K
Sbjct: 98 FSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 156
Query: 56 RDGKSYSTN-----------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH 104
RD + + + + + G + + L G
Sbjct: 157 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL 216
Query: 105 ALDLIRDRNLQMLT--DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 162
+ + ++ S + E + P+ L S +
Sbjct: 217 KAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 276
Query: 163 QKE 165
+
Sbjct: 277 LER 279
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.3 bits (156), Expect = 3e-12
Identities = 29/163 (17%), Positives = 56/163 (34%), Gaps = 9/163 (5%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD---EDGNPRLSTFGLMKNSRD 57
++ + +A++Y S A + D+ +L+ + +L+ FG K +
Sbjct: 108 FTEREASEIMKSIGEAIQYLHSINIA-HRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 166
Query: 58 GKSYSTN---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL 114
S +T + PE L + ++S G ++ LL G S+ I
Sbjct: 167 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK 226
Query: 115 QMLTDSCLEGQFTDDDG--TELVRLASRCLQYEPRERPNPKSL 155
+ E + E+ L L+ EP +R
Sbjct: 227 TRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 269
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.7 bits (154), Expect = 3e-12
Identities = 32/182 (17%), Positives = 52/182 (28%), Gaps = 28/182 (15%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ + +L Q LEY + DL +L DE+G +L+ FGL K+
Sbjct: 97 LTPSHIKAYMLMTLQGLEYLHQHWIL-HRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR 155
Query: 61 YSTNLAFT-----PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 115
T+ T P +++ G +L +LL P + R +
Sbjct: 156 AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFE 215
Query: 116 MLTDSCLE----------------------GQFTDDDGTELVRLASRCLQYEPRERPNPK 153
L E G +L+ L + P R
Sbjct: 216 TLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITAT 275
Query: 154 SL 155
Sbjct: 276 QA 277
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.0 bits (155), Expect = 4e-12
Identities = 29/158 (18%), Positives = 58/158 (36%), Gaps = 11/158 (6%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ ALEY S+ +Y D+ ++ D+DG+ +++ FGL K +
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRDV-VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160
Query: 61 YSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM 116
TP PE L + G ++ +++ G+ + + + + L
Sbjct: 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME 220
Query: 117 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154
E +F E L + L+ +P++R
Sbjct: 221 ------EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGP 252
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.9 bits (152), Expect = 1e-11
Identities = 28/188 (14%), Positives = 64/188 (34%), Gaps = 34/188 (18%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ + + + L+Y S L+ DL +L + + ++ FGL + +
Sbjct: 106 LSNDHICYFLYQILRGLKYIHSANV-LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 164
Query: 61 YST-------NLAFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDR 112
++ + PE + + +S+ I+S G +L ++LS + I P +
Sbjct: 165 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH 224
Query: 113 NLQMLTDSCLE-------------------------GQFTDDDGTELVRLASRCLQYEPR 147
L +L E + + ++ + L + L + P
Sbjct: 225 ILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPH 284
Query: 148 ERPNPKSL 155
+R +
Sbjct: 285 KRIEVEQA 292
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.5 bits (151), Expect = 1e-11
Identities = 27/182 (14%), Positives = 58/182 (31%), Gaps = 28/182 (15%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ +V + + L Y + G + DL + +ED ++ FGL + + +
Sbjct: 118 LGEDRIQFLVYQMLKGLRYIHAAGII-HRDLKPGNLAVNEDCELKILDFGLARQADSEMT 176
Query: 61 YSTNLAF--TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI------------------ 100
+ P L R T I+S G ++ ++++GK +
Sbjct: 177 GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTG 236
Query: 101 -PPSHALDLIRDRNLQMLTDSCLE------GQFTDDDGTELVRLASRCLQYEPRERPNPK 153
PP+ + ++ + E + V L + L + +R
Sbjct: 237 TPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAG 296
Query: 154 SL 155
Sbjct: 297 EA 298
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.1 bits (150), Expect = 2e-11
Identities = 36/184 (19%), Positives = 56/184 (30%), Gaps = 31/184 (16%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNP-RLSTFGLMKNSRDG 58
+ + L ++L Y S G + H D+ +L D D +L FG K G
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 59 KSYSTNLAFT----PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI----PPSHALDLI- 109
+ + + P T ++S G +L +LL G+ I L I
Sbjct: 177 EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
Query: 110 ------------------RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151
+ + F E + L SR L+Y P R
Sbjct: 237 KVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 296
Query: 152 PKSL 155
P
Sbjct: 297 PLEA 300
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.0 bits (147), Expect = 3e-11
Identities = 35/183 (19%), Positives = 66/183 (36%), Gaps = 29/183 (15%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ + + L Q L +C S R L+ DL +L + +G +L+ FGL +
Sbjct: 99 IPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 157
Query: 61 YSTNLAFT-----PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI-PPSHALDLIRD--R 112
T+ T P L + I+S G + ++++ + + P +D + R
Sbjct: 158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Query: 113 NLQMLTDSCLEGQFTDDD--------------------GTELVRLASRCLQYEPRERPNP 152
L + G + D + L S+ L Y+P +R +
Sbjct: 218 TLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 277
Query: 153 KSL 155
K+
Sbjct: 278 KAA 280
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 60.2 bits (145), Expect = 8e-11
Identities = 27/152 (17%), Positives = 51/152 (33%), Gaps = 8/152 (5%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-GK 59
+ EY S +Y DL +L D+ G +++ FG K +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 60 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 119
+ PE + + ++ G L+ ++ +G PP A I+
Sbjct: 197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGY--PPFFADQPIQ----IYEKI 250
Query: 120 SCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151
+ +F ++L L LQ + +R
Sbjct: 251 VSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.6 bits (143), Expect = 8e-11
Identities = 24/184 (13%), Positives = 50/184 (27%), Gaps = 30/184 (16%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ + + L + L +C S+ L+ DL +L + +G +L+ FGL +
Sbjct: 98 LDPEIVKSFLFQLLKGLGFCHSRNV-LHRDLKPQNLLINRNGELKLANFGLARAFGIPVR 156
Query: 61 YSTNLAFT-----PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-------------- 101
+ T P + ++S G + +L +
Sbjct: 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIF 216
Query: 102 ----------PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151
L + M + L L+ P +R +
Sbjct: 217 RLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS 276
Query: 152 PKSL 155
+
Sbjct: 277 AEEA 280
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 58.7 bits (141), Expect = 2e-10
Identities = 28/183 (15%), Positives = 62/183 (33%), Gaps = 29/183 (15%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
++ +L L + YC + L+ DL +L + +G +++ FGL +
Sbjct: 97 LESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVR 155
Query: 61 YSTNLAFTP-----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 115
T+ T + + + + I+S G + ++++G + P + R +
Sbjct: 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR 215
Query: 116 MLTDSCLEG-----------------------QFTDDDGTELVRLASRCLQYEPRERPNP 152
+L + F + L S+ L+ +P +R
Sbjct: 216 ILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITA 275
Query: 153 KSL 155
K
Sbjct: 276 KQA 278
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.4 bits (135), Expect = 1e-09
Identities = 33/190 (17%), Positives = 58/190 (30%), Gaps = 36/190 (18%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ RV+ L L Y L+ D+ A +L DG +L+ FGL + K+
Sbjct: 114 FTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 172
Query: 61 YSTN--------LAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD 111
N L + PPE L R P ++ G ++ ++ + I +
Sbjct: 173 SQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA 232
Query: 112 RNLQMLTDSCLEGQFTDDDGT--------------------------ELVRLASRCLQYE 145
Q+ E D+ + L + L +
Sbjct: 233 LISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLD 292
Query: 146 PRERPNPKSL 155
P +R +
Sbjct: 293 PAQRIDSDDA 302
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.8 bits (131), Expect = 4e-09
Identities = 33/157 (21%), Positives = 53/157 (33%), Gaps = 10/157 (6%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
V + ALE+ G +Y D+ IL D +G+ L+ FGL K ++
Sbjct: 126 FTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET 184
Query: 61 YSTNLAFTPPEY-----LRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 113
EY +R G +S G L+ +LL+G P +
Sbjct: 185 ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA--SPFTVDGEKNSQA 242
Query: 114 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150
E + + L R L +P++R
Sbjct: 243 EISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRL 279
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 52.3 bits (124), Expect = 3e-08
Identities = 30/204 (14%), Positives = 64/204 (31%), Gaps = 49/204 (24%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP------RLSTFGLMKN 54
+ ++ L L+Y + ++ D+ +L + +P +++ G
Sbjct: 122 IPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW 181
Query: 55 SRDGKSYS-TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI------------- 100
+ + S + PE L + I+S L+ +L++G +
Sbjct: 182 YDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 241
Query: 101 ------------PPSHALDLIRDRNLQMLTDSCLEG-----------------QFTDDDG 131
PS+ L + + L +F+ D+
Sbjct: 242 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEA 301
Query: 132 TELVRLASRCLQYEPRERPNPKSL 155
E+ S LQ +PR+R + L
Sbjct: 302 KEISDFLSPMLQLDPRKRADAGGL 325
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.5 bits (117), Expect = 2e-07
Identities = 27/182 (14%), Positives = 53/182 (29%), Gaps = 28/182 (15%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL--MKNSRDG 58
+ ++ + + L+Y S + DL + +ED ++ FGL +
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADII-HRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 176
Query: 59 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH------------------- 99
+T P L I+S G ++ +LL+G+
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 236
Query: 100 IPPSHALDLIRDRNLQMLTDSCLE------GQFTDDDGTELVRLASRCLQYEPRERPNPK 153
P + L I + + S + V L + L + +R
Sbjct: 237 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 154 SL 155
Sbjct: 297 QA 298
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 49.1 bits (116), Expect = 3e-07
Identities = 26/192 (13%), Positives = 60/192 (31%), Gaps = 38/192 (19%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP-RLSTFGLMKNSRDGK 59
+ + + +AL+YC S G + D+ + ++ D + RL +GL + G+
Sbjct: 126 LTDYDIRFYMYEILKALDYCHSMGIM-HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 184
Query: 60 SYS----TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH---------------- 99
Y+ + P + ++S G +L ++ K
Sbjct: 185 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 244
Query: 100 ----------------IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 143
I + I R+ + + + + E + + L+
Sbjct: 245 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 304
Query: 144 YEPRERPNPKSL 155
Y+ + R +
Sbjct: 305 YDHQSRLTAREA 316
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 48.0 bits (113), Expect = 3e-07
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
Query: 235 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 294
K++G+ F + +A CY + I + Y R+LCYL P+ AL D +A
Sbjct: 8 KEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALE 66
Query: 295 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 330
+ A + M +EA L+ +L
Sbjct: 67 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLA 102
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} Length = 153 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Score = 40.4 bits (93), Expect = 6e-05
Identities = 21/127 (16%), Positives = 46/127 (36%), Gaps = 16/127 (12%)
Query: 220 SFQMWTDQ-MQETLNSKKKGDVAFRQKDLKDAIECYTQF---------------IDAGTM 263
+ ++ +Q + K++G+ F++ ++ +AI Y + +D
Sbjct: 5 IYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKN 64
Query: 264 VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVAL 323
+ + + CY + A++ A + I A Y A G EA+ L
Sbjct: 65 IEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENL 124
Query: 324 KEGTTLE 330
+ +L
Sbjct: 125 YKAASLN 131
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 170 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.8 bits (94), Expect = 7e-05
Identities = 19/126 (15%), Positives = 43/126 (34%), Gaps = 15/126 (11%)
Query: 220 SFQMWTDQMQETLNS-KKKGDVAFRQKDLKDAIECYTQFIDAGTMVS------------- 265
S++M +++ E K++G V F++ K A+ Y + + S
Sbjct: 1 SWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQAL 60
Query: 266 -PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALK 324
+ ++C+L A+ +A + + A A+ A+ +
Sbjct: 61 RLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQ 120
Query: 325 EGTTLE 330
+ L
Sbjct: 121 KVLQLY 126
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Length = 128 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.3 bits (88), Expect = 3e-04
Identities = 15/97 (15%), Positives = 35/97 (36%), Gaps = 1/97 (1%)
Query: 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALND 288
++ L K+ G+ A+++KD A++ Y + + + T ++ Y
Sbjct: 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCREL 60
Query: 289 AMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 325
+A + A A + +G + K+
Sbjct: 61 CEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKD 97
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} Length = 168 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Score = 38.8 bits (89), Expect = 3e-04
Identities = 21/126 (16%), Positives = 40/126 (31%), Gaps = 15/126 (11%)
Query: 220 SFQMWTDQMQETLNS-KKKGDVAFRQKDLKDAIECYTQFI--------------DAGTMV 264
S++M T + E K+KG V F+ A+ Y + + A
Sbjct: 3 SWEMDTKEKLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESF 62
Query: 265 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALK 324
+ ++CYL A+ +A + Y + A M A+ +
Sbjct: 63 LLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFE 122
Query: 325 EGTTLE 330
+ +
Sbjct: 123 KVLEVN 128
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Length = 388 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.7 bits (91), Expect = 3e-04
Identities = 16/110 (14%), Positives = 31/110 (28%), Gaps = 1/110 (0%)
Query: 216 ANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLC 275
A + + + V + Q + AI+ Y + I+ P Y +
Sbjct: 222 AVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPH-FPDAYCNLANA 280
Query: 276 YLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 325
+A + A + P + A G EA ++
Sbjct: 281 LKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRK 330
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} Length = 192 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.7 bits (89), Expect = 4e-04
Identities = 12/92 (13%), Positives = 31/92 (33%), Gaps = 4/92 (4%)
Query: 228 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALN 287
+ E ++ +G +A +KD K A++ ++ D + Y + +A
Sbjct: 2 LVEAISLWNEGVLAADKKDWKGALDAFSAVQDP----HSRICFNIGCMYTILKNMTEAEK 57
Query: 288 DAMQAQIISPIWHIASYLQAAALSAMGMENEA 319
++ +A + + + A
Sbjct: 58 AFTRSINRDKHLAVAYFQRGMLYYQTEKYDLA 89
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.5 bits (91), Expect = 4e-04
Identities = 24/194 (12%), Positives = 59/194 (30%), Gaps = 40/194 (20%)
Query: 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 60
+ ++ + +++ S G ++ DL I+ D ++ FGL + +
Sbjct: 116 LDHERMSYLLYQMLCGIKHLHSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 174
Query: 61 YSTN---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML 117
+ + PE + I+S G ++ +++ K + P ++ ++ L
Sbjct: 175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 234
Query: 118 TDSCLE------------------------------------GQFTDDDGTELVRLASRC 141
C E + ++ L S+
Sbjct: 235 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 294
Query: 142 LQYEPRERPNPKSL 155
L +P +R +
Sbjct: 295 LVIDPAKRISVDDA 308
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Length = 117 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.6 bits (83), Expect = 8e-04
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Query: 235 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 294
K+KG+ A ++ DA++CY++ I RS Y Q A D +
Sbjct: 7 KEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYS-NRSAAYAKKGDYQKAYEDGCKTVD 65
Query: 295 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 330
+ P W +AAAL + EA+ +EG E
Sbjct: 66 LKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHE 101
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 340 | |||
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 99.98 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 99.98 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 99.98 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 99.98 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 99.97 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 99.97 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 99.97 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 99.97 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 99.97 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 99.97 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 99.97 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 99.97 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 99.96 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 99.96 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 99.96 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 99.96 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 99.96 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.95 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.86 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.82 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.82 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.8 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.78 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.76 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.73 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.71 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.68 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 99.68 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.67 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.64 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 99.62 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.59 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.57 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.56 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.55 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.53 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.49 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.47 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.45 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.41 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.37 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.35 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 99.32 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.25 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.24 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.22 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.21 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.21 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.21 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.19 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.18 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.16 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.15 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 99.07 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 99.01 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 99.0 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 98.95 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 98.94 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.9 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.84 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.81 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.73 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.68 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.54 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 98.54 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.52 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.43 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.39 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.35 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.31 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 97.97 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 97.97 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.83 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 97.51 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.31 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 93.09 | |
| d2crba1 | 83 | Nuclear receptor binding factor 2, NRBF2, N-termin | 91.55 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 91.51 | |
| d1wfda_ | 93 | Hypothetical protein 1500032H18Rik {Mouse (Mus mus | 90.79 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 90.7 | |
| d2crba1 | 83 | Nuclear receptor binding factor 2, NRBF2, N-termin | 87.55 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 86.4 | |
| d1wr0a1 | 77 | Vacuolar sorting protein 4b (VPS4B, SKD1 protein) | 85.85 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 83.6 | |
| d2cfua2 | 505 | Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxI | 80.6 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-39 Score=277.78 Aligned_cols=163 Identities=19% Similarity=0.295 Sum_probs=128.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
++|.+++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++..... .+..||+.|||||++.
T Consensus 101 ~~~~~~~~i~~qi~~gl~yLH~~~-ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~ 179 (276)
T d1uwha_ 101 FEMIKLIDIARQTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179 (276)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTSSEEECCCCCSCC------------CCCCGGGCCHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCC-EeccccCHHHEEEcCCCCEEEccccceeeccccCCcccccccccCcccCCHHHHh
Confidence 578999999999999999999999 999999999999999999999999999765432 2346899999999997
Q ss_pred C---CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhh-ccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC
Q 019495 75 T---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL-QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150 (340)
Q Consensus 75 ~---~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 150 (340)
+ +.++.++|||||||++|||+||+.||.+........... .....+. ....+..++..+.+++.+||+.||++||
T Consensus 180 ~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~l~~li~~cl~~dp~~RP 258 (276)
T d1uwha_ 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPD-LSKVRSNCPKAMKRLMAECLKKKRDERP 258 (276)
T ss_dssp TCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCC-GGGSCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred cccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCc-chhccccchHHHHHHHHHHcCCCHhHCc
Confidence 5 347889999999999999999999987643222111111 1111111 1234556678999999999999999999
Q ss_pred CHHHHHHHhcccccC
Q 019495 151 NPKSLVTALSPLQKE 165 (340)
Q Consensus 151 s~~~i~~~L~~~~~~ 165 (340)
|+.+|+..|+.+.+.
T Consensus 259 t~~~il~~Le~l~~~ 273 (276)
T d1uwha_ 259 LFPQILASIELLARS 273 (276)
T ss_dssp CHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHc
Confidence 999999999887654
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-37 Score=265.62 Aligned_cols=150 Identities=23% Similarity=0.355 Sum_probs=128.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--CccccCCcccCcccccCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTGRV 78 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~~ 78 (340)
+++.....++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++..... ....||+.|||||++.+..+
T Consensus 103 l~e~~~~~i~~qi~~al~~lH~~~-ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~Gt~~Y~APE~~~~~~~ 181 (263)
T d2j4za1 103 FDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 181 (263)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEETTEEGGGCCHHHHTTCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeeeeeccccceecCCCCEeecccceeeecCCCcccccCCCCcccCHHHHcCCCC
Confidence 578889999999999999999999 999999999999999999999999999876544 34578999999999998889
Q ss_pred CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 79 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 79 ~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+.++|||||||++|+|++|+.||.......+....... ...+|..+++++.+++.+||+.||++|||+.++++
T Consensus 182 ~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~ 254 (263)
T d2j4za1 182 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 254 (263)
T ss_dssp CTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence 99999999999999999999999765544333222111 22345567789999999999999999999999985
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.2e-37 Score=270.90 Aligned_cols=159 Identities=19% Similarity=0.255 Sum_probs=124.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC---------ccccCCcccCcc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---------SYSTNLAFTPPE 71 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~---------~~~~~~~y~aPE 71 (340)
++|.+++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++...... ...+|+.|||||
T Consensus 125 l~~~~~~~i~~qia~gl~yLH~~~-iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE 203 (299)
T d1jpaa_ 125 FTVIQLVGMLRGIAAGMKYLADMN-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 203 (299)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC-----------------------CGGGSCHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCC-CccCccccceEEECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHH
Confidence 578999999999999999999999 9999999999999999999999999998654332 123578899999
Q ss_pred cccCCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC
Q 019495 72 YLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 150 (340)
Q Consensus 72 ~~~~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 150 (340)
++.++.++.++|||||||++|||+| |+.||.+.....+...... ......+..++..+.+|+.+||+.||++||
T Consensus 204 ~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l~~li~~cl~~~P~~RP 278 (299)
T d1jpaa_ 204 AIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ-----DYRLPPPMDCPSALHQLMLDCWQKDRNHRP 278 (299)
T ss_dssp HHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-----TCCCCCCTTCCHHHHHHHHHHTCSSTTTSC
T ss_pred HHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCccchHHHHHHHHHHcCCCHhHCc
Confidence 9998899999999999999999998 7888876544333222211 122334566778999999999999999999
Q ss_pred CHHHHHHHhcccccC
Q 019495 151 NPKSLVTALSPLQKE 165 (340)
Q Consensus 151 s~~~i~~~L~~~~~~ 165 (340)
|+.+|++.|+++.+.
T Consensus 279 s~~ei~~~L~~~l~~ 293 (299)
T d1jpaa_ 279 KFGQIVNTLDKMIRN 293 (299)
T ss_dssp CHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHhcC
Confidence 999999999887554
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-37 Score=270.03 Aligned_cols=159 Identities=19% Similarity=0.270 Sum_probs=126.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-------ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~y~aPE~~ 73 (340)
++|.+++.++.||+.||.|||+++ ||||||||+||||+.++.+||+|||+++...... ...||+.|||||++
T Consensus 107 ~~~~~~~~i~~~i~~gl~~lH~~~-iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l 185 (283)
T d1mqba_ 107 FSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 185 (283)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHH
T ss_pred ccHHHHHHHHHHHHHhhhhccccc-cccCccccceEEECCCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHH
Confidence 578899999999999999999999 9999999999999999999999999998654321 23468899999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcchh-HHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.++.++.++|||||||++|||++|+.|+..... ..+. .........+.+..++..+.+|+.+||+.||++|||+
T Consensus 186 ~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~ 260 (283)
T d1mqba_ 186 SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM-----KAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKF 260 (283)
T ss_dssp HSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH-----HHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCH
T ss_pred ccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHH-----HHHhccCCCCCchhhHHHHHHHHHHHCcCCHhHCcCH
Confidence 989999999999999999999997766544322 1111 1112223345566678899999999999999999999
Q ss_pred HHHHHHhcccccC
Q 019495 153 KSLVTALSPLQKE 165 (340)
Q Consensus 153 ~~i~~~L~~~~~~ 165 (340)
.+|++.|+.+.+.
T Consensus 261 ~eil~~L~~l~~~ 273 (283)
T d1mqba_ 261 ADIVSILDKLIRA 273 (283)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhhC
Confidence 9999999887654
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-37 Score=268.57 Aligned_cols=158 Identities=22% Similarity=0.348 Sum_probs=129.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
|+|..+++|+.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++...+.. ...+|+.|||||++.+
T Consensus 106 l~~~~~~~i~~qi~~gl~~lH~~~-ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~ 184 (272)
T d1qpca_ 106 LTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY 184 (272)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-cccCccchhheeeecccceeeccccceEEccCCccccccccCCcccccChHHHhC
Confidence 578999999999999999999999 9999999999999999999999999998765432 3457889999999998
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcc-hhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+.++.++|||||||++|||+||+.|+... ....+... + ........|..++..+.+|+.+||+.||++|||+++
T Consensus 185 ~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~-i----~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~e 259 (272)
T d1qpca_ 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN-L----ERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDY 259 (272)
T ss_dssp CEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH-H----HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHH-H----HhcCCCCCcccChHHHHHHHHHHcCCCHhHCcCHHH
Confidence 88999999999999999999976655432 22211111 1 112233445667789999999999999999999999
Q ss_pred HHHHhccccc
Q 019495 155 LVTALSPLQK 164 (340)
Q Consensus 155 i~~~L~~~~~ 164 (340)
|++.|+.+..
T Consensus 260 i~~~L~~~ft 269 (272)
T d1qpca_ 260 LRSVLEDFFT 269 (272)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHhhhhhh
Confidence 9999987654
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.8e-37 Score=268.65 Aligned_cols=160 Identities=20% Similarity=0.275 Sum_probs=131.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCc-----cccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-----YSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~y~aPE~~~~ 75 (340)
++|..++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++....... ..+++.|+|||++.+
T Consensus 112 ~~~~~~~~i~~qi~~gL~yLH~~~-iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~ 190 (287)
T d1opja_ 112 VSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 190 (287)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHCC-cccCccccCeEEECCCCcEEEccccceeecCCCCceeeccccccccccChHHHcC
Confidence 578899999999999999999999 99999999999999999999999999987654322 246889999999998
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i 155 (340)
+.++.++|||||||++|||++|+.||......... ............+..++..+.+|+.+||+.||++|||+.+|
T Consensus 191 ~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~----~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei 266 (287)
T d1opja_ 191 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV----YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 266 (287)
T ss_dssp CCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH----HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHH----HHHHhcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHH
Confidence 99999999999999999999987766443221111 11112223445566778899999999999999999999999
Q ss_pred HHHhcccccC
Q 019495 156 VTALSPLQKE 165 (340)
Q Consensus 156 ~~~L~~~~~~ 165 (340)
++.|+.+...
T Consensus 267 ~~~L~~~~~~ 276 (287)
T d1opja_ 267 HQAFETMFQE 276 (287)
T ss_dssp HHHHHHTTSS
T ss_pred HHHHHHHHHh
Confidence 9999887543
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-37 Score=273.54 Aligned_cols=155 Identities=21% Similarity=0.328 Sum_probs=128.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
|+|..++.++.||+.||.|||+++ ||||||||+||+++.++.+||+|||+++...... ...+|+.|||||++.
T Consensus 161 l~~~~~~~i~~qi~~gl~yLH~~~-IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~ 239 (325)
T d1rjba_ 161 LTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF 239 (325)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHc
Confidence 578899999999999999999999 9999999999999999999999999998654332 234689999999999
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
++.++.++|||||||++|||+| |+.||.+........ .+.........|..++..+.+||.+||+.||++|||++
T Consensus 240 ~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~----~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ 315 (325)
T d1rjba_ 240 EGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFY----KLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFP 315 (325)
T ss_dssp HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHH----HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHH----HHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHH
Confidence 8999999999999999999998 788886543322111 11112233445667788999999999999999999999
Q ss_pred HHHHHhc
Q 019495 154 SLVTALS 160 (340)
Q Consensus 154 ~i~~~L~ 160 (340)
+|++.|.
T Consensus 316 ei~~~L~ 322 (325)
T d1rjba_ 316 NLTSFLG 322 (325)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999884
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-37 Score=265.30 Aligned_cols=157 Identities=19% Similarity=0.328 Sum_probs=121.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
++|..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...||+.|+|||++.+
T Consensus 98 ~~~~~~~~i~~qia~gl~~lH~~~-iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~ 176 (263)
T d1sm2a_ 98 FAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF 176 (263)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCTTCSGGGEEECGGGCEEECSCC------------------CTTSCCHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHhhhccc-eeecccchhheeecCCCCeEecccchheeccCCCceeecceecCcccCChHHhcC
Confidence 478899999999999999999999 9999999999999999999999999998654332 2457899999999999
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCC-CcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+.++.++|||||||++|||+|++.|+ .......+..... .......|..+++++.+++.+||+.||++|||+++
T Consensus 177 ~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~-----~~~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~ 251 (263)
T d1sm2a_ 177 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS-----TGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSR 251 (263)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHH-----HTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHH-----hcCCCCCccccCHHHHHHHHHHccCCHhHCcCHHH
Confidence 89999999999999999999965454 3332222221111 11223345566789999999999999999999999
Q ss_pred HHHHhcccc
Q 019495 155 LVTALSPLQ 163 (340)
Q Consensus 155 i~~~L~~~~ 163 (340)
|++.|+.+.
T Consensus 252 il~~L~~i~ 260 (263)
T d1sm2a_ 252 LLRQLAEIA 260 (263)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998774
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-37 Score=264.48 Aligned_cols=157 Identities=18% Similarity=0.239 Sum_probs=130.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-------ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~y~aPE~~ 73 (340)
|+|.+++.|+.||+.||.|||+++ ||||||||+|||++.++.+|++|||+++...... ...||+.|||||++
T Consensus 104 l~~~~~~~i~~qi~~gl~ylH~~~-iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l 182 (277)
T d1xbba_ 104 VKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 182 (277)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhHHhCC-cccCCCcchhhcccccCcccccchhhhhhccccccccccccccCCCceecCchhh
Confidence 578999999999999999999999 9999999999999999999999999998654332 23578899999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.++.++.++|||||||++|||+| |+.||.+.....+..... .......|..++..+.+||.+||+.||++|||+
T Consensus 183 ~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~-----~~~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~ 257 (277)
T d1xbba_ 183 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-----KGERMGCPAGCPREMYDLMNLCWTYDVENRPGF 257 (277)
T ss_dssp HHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-----TTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred cCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHH-----cCCCCCCCcccCHHHHHHHHHHcCCCHhHCcCH
Confidence 98889999999999999999998 888887654333222111 122334566778999999999999999999999
Q ss_pred HHHHHHhcccc
Q 019495 153 KSLVTALSPLQ 163 (340)
Q Consensus 153 ~~i~~~L~~~~ 163 (340)
++|+..|+...
T Consensus 258 ~~i~~~L~~~~ 268 (277)
T d1xbba_ 258 AAVELRLRNYY 268 (277)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHhhCHH
Confidence 99998887653
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-37 Score=268.68 Aligned_cols=158 Identities=24% Similarity=0.323 Sum_probs=123.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
|+|.+++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++..... ....||+.|+|||++.
T Consensus 131 l~~~~~~~~~~qi~~gl~ylH~~~-ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~ 209 (299)
T d1ywna1 131 LTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 209 (299)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-CcCCcCCccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhh
Confidence 468899999999999999999999 999999999999999999999999999764432 2346789999999999
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCC-CCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKH-IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
++.++.++|||||||++|||+||.. ||............+ ........+..+++.+.+++.+||+.||++|||+.
T Consensus 210 ~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ 285 (299)
T d1ywna1 210 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL----KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 285 (299)
T ss_dssp HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHH----HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred cCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHH----hcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHH
Confidence 8899999999999999999999765 554432211111111 11123345566778999999999999999999999
Q ss_pred HHHHHhcccc
Q 019495 154 SLVTALSPLQ 163 (340)
Q Consensus 154 ~i~~~L~~~~ 163 (340)
+|++.|+.+.
T Consensus 286 eil~~L~~il 295 (299)
T d1ywna1 286 ELVEHLGNLL 295 (299)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998764
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.2e-37 Score=264.90 Aligned_cols=157 Identities=18% Similarity=0.227 Sum_probs=131.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-------ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~y~aPE~~ 73 (340)
|+|.+++.++.||+.||.|||+++ ||||||||+||+++.++.+||+|||+++...... ...+|+.|+|||++
T Consensus 106 l~~~~~~~i~~qi~~gL~ylH~~~-iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 184 (285)
T d1u59a_ 106 IPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI 184 (285)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eecCcCchhheeeccCCceeeccchhhhcccccccccccccccccCccccChHHH
Confidence 578999999999999999999999 9999999999999999999999999998654332 23568899999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.++.++.++|||||||++|||+| |+.||.......+..... .....+.|..++.++.+||.+||+.||++|||+
T Consensus 185 ~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~-----~~~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~ 259 (285)
T d1u59a_ 185 NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-----QGKRMECPPECPPELYALMSDCWIYKWEDRPDF 259 (285)
T ss_dssp HHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHH-----TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCH
T ss_pred hCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHH-----cCCCCCCCCcCCHHHHHHHHHHcCCCHhHCcCH
Confidence 98899999999999999999998 888887654333222111 122334566778999999999999999999999
Q ss_pred HHHHHHhcccc
Q 019495 153 KSLVTALSPLQ 163 (340)
Q Consensus 153 ~~i~~~L~~~~ 163 (340)
.+|++.|+...
T Consensus 260 ~~i~~~L~~~~ 270 (285)
T d1u59a_ 260 LTVEQRMRACY 270 (285)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999887654
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-36 Score=262.75 Aligned_cols=153 Identities=20% Similarity=0.243 Sum_probs=126.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
|++.+...++.||+.||.|||++| ||||||||+|||++.+|.+||+|||+++..... ....||+.|+|||++.++
T Consensus 113 l~~~~~~~i~~qi~~aL~yLH~~~-iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~ 191 (293)
T d1yhwa1 113 MDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 191 (293)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-CcccCCcHHHeEECCCCcEeeccchhheeeccccccccccccCCCccChhhhcCC
Confidence 567889999999999999999999 999999999999999999999999999875433 245689999999999988
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
.++.++|||||||++|+|++|+.||.+............. .......+..++..+.++|.+||+.||++|||+.+++
T Consensus 192 ~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~---~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil 268 (293)
T d1yhwa1 192 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN---GTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELL 268 (293)
T ss_dssp CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHH---CSCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred CCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhC---CCCCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHh
Confidence 8999999999999999999999999765433222221111 1112234556678999999999999999999999997
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
+
T Consensus 269 ~ 269 (293)
T d1yhwa1 269 Q 269 (293)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-36 Score=262.71 Aligned_cols=161 Identities=24% Similarity=0.340 Sum_probs=128.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
|+|.+++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++...... ...+|+.|+|||++.+
T Consensus 110 l~~~~~~~i~~~i~~gl~~LH~~~-ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 188 (285)
T d1fmka3 110 LRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 188 (285)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhhhh-eecccccceEEEECCCCcEEEcccchhhhccCCCceeeccccccccccChHHHhC
Confidence 689999999999999999999999 9999999999999999999999999998654332 2457899999999999
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhH-HHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+.++.++|||||||++|||++|+.|+...... .+...... ....+.+..++.++.++|.+||+.||++|||+++
T Consensus 189 ~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~ 263 (285)
T d1fmka3 189 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-----GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEY 263 (285)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-----TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHh-----cCCCCCCcccCHHHHHHHHHHcccCHhHCcCHHH
Confidence 99999999999999999999977666443222 12111111 1233456667789999999999999999999999
Q ss_pred HHHHhcccccCCC
Q 019495 155 LVTALSPLQKETE 167 (340)
Q Consensus 155 i~~~L~~~~~~~~ 167 (340)
|+..|+.+.....
T Consensus 264 i~~~L~~~~~~~~ 276 (285)
T d1fmka3 264 LQAFLEDYFTSTE 276 (285)
T ss_dssp HHHHHHTTTSCSC
T ss_pred HHHHHhhhhcCCC
Confidence 9999998876543
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.7e-36 Score=264.79 Aligned_cols=152 Identities=20% Similarity=0.209 Sum_probs=127.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCccccCCcccCcccccC---CC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRT---GR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~---~~ 77 (340)
|++..+..++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++.........||+.|||||++.+ +.
T Consensus 112 l~e~~~~~i~~qi~~aL~yLH~~~-iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~GT~~Y~APE~~~~~~~~~ 190 (309)
T d1u5ra_ 112 LQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQ 190 (309)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCGGGCCHHHHTTTTSCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEECCCCCEEEeecccccccCCCCccccCccccCHHHHhccCCCC
Confidence 578899999999999999999999 99999999999999999999999999998887778899999999999864 45
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
++.++|||||||++|||++|+.||.+.............. .....+..+++.+.++|.+||+.||++|||+.++++
T Consensus 191 y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~----~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 266 (309)
T d1u5ra_ 191 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE----SPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266 (309)
T ss_dssp BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC----CCCCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC----CCCCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence 8999999999999999999999987654332222222111 111223445688999999999999999999999975
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-36 Score=261.75 Aligned_cols=152 Identities=21% Similarity=0.300 Sum_probs=118.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCC----CccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKG----RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEY 72 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~----~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~ 72 (340)
|++.++..++.||+.||.|||+++ +||||||||+|||++.+|.+||+|||+++..... .+..||+.|||||+
T Consensus 106 l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~ 185 (269)
T d2java1 106 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQ 185 (269)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC-----------CCCSCCCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecccCCCccccCCCCcccCCHHH
Confidence 578889999999999999999864 3999999999999999999999999999876543 24578999999999
Q ss_pred ccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 73 LRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 73 ~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
+.+..++.++|||||||++|||+||+.||.......+....... ....++..+++++.+++.+||+.||++|||+
T Consensus 186 l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~-----~~~~~~~~~s~~l~~li~~~L~~dp~~Rps~ 260 (269)
T d2java1 186 MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG-----KFRRIPYRYSDELNEIITRMLNLKDYHRPSV 260 (269)
T ss_dssp HTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT-----CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred HcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcC-----CCCCCCcccCHHHHHHHHHHcCCChhHCcCH
Confidence 99888999999999999999999999999775544333222111 1123455677899999999999999999999
Q ss_pred HHHHH
Q 019495 153 KSLVT 157 (340)
Q Consensus 153 ~~i~~ 157 (340)
.++++
T Consensus 261 ~ell~ 265 (269)
T d2java1 261 EEILE 265 (269)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 99974
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-36 Score=258.89 Aligned_cols=153 Identities=18% Similarity=0.204 Sum_probs=121.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|||||++.
T Consensus 100 l~e~~~~~i~~qi~~al~ylH~~~-IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~ 178 (271)
T d1nvra_ 100 MPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178 (271)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcC-CccCcccHHHEEECCCCCEEEccchhheeeccCCccccccceeeCcCccCHhHhc
Confidence 578889999999999999999999 999999999999999999999999999865322 3457899999999998
Q ss_pred CCCC-CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~-~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..+ +.++||||+||++|||++|+.||.............. ...........+++.+.+++.+||+.||++|||++
T Consensus 179 ~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~ 255 (271)
T d1nvra_ 179 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK---EKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 255 (271)
T ss_dssp CSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHH---TTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred CCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHh---cCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHH
Confidence 7765 6789999999999999999999865422111111111 11111122334568899999999999999999999
Q ss_pred HHHH
Q 019495 154 SLVT 157 (340)
Q Consensus 154 ~i~~ 157 (340)
++++
T Consensus 256 eil~ 259 (271)
T d1nvra_ 256 DIKK 259 (271)
T ss_dssp HHTT
T ss_pred HHhc
Confidence 9874
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.2e-36 Score=259.61 Aligned_cols=153 Identities=16% Similarity=0.173 Sum_probs=124.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCccccc--
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLR-- 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~-- 74 (340)
|++.++..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... .+..||+.|+|||++.
T Consensus 107 l~e~~~~~i~~qi~~gL~ylH~~~-ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~ 185 (288)
T d2jfla1 107 LTESQIQVVCKQTLDALNYLHDNK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCE 185 (288)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-EEEeecChhheeECCCCCEEEEechhhhccCCCcccccccccccccCCHHHHhhc
Confidence 578889999999999999999999 999999999999999999999999998764322 3567899999999984
Q ss_pred ---CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 75 ---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 75 ---~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
+..++.++|||||||++|||+||+.||.+.............. ......+..+++++.++|.+||+.||++|||
T Consensus 186 ~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~---~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t 262 (288)
T d2jfla1 186 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE---PPTLAQPSRWSSNFKDFLKKCLEKNVDARWT 262 (288)
T ss_dssp STTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSC---CCCCSSGGGSCHHHHHHHHHHSCSSTTTSCC
T ss_pred ccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC---CCCCCccccCCHHHHHHHHHHccCChhHCcC
Confidence 3457899999999999999999999987654332222221111 1112234556789999999999999999999
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.++++
T Consensus 263 ~~ell~ 268 (288)
T d2jfla1 263 TSQLLQ 268 (288)
T ss_dssp HHHHTT
T ss_pred HHHHhc
Confidence 999874
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-35 Score=253.11 Aligned_cols=155 Identities=24% Similarity=0.334 Sum_probs=129.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
+++..+++++.||++||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...+|+.|+|||++.+
T Consensus 97 ~~~~~~~~i~~qi~~gl~~LH~~~-iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~ 175 (258)
T d1k2pa_ 97 FQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY 175 (258)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-BCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHhhcC-cccccccceeEEEcCCCcEEECcchhheeccCCCceeecccCCCCCcCCcHHhcC
Confidence 468899999999999999999999 9999999999999999999999999997654332 2457889999999998
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
..++.++|||||||++|||+| |+.||.......+...... ......|..+++.+.++|.+||+.||++|||+++
T Consensus 176 ~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~-----~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~e 250 (258)
T d1k2pa_ 176 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ-----GLRLYRPHLASEKVYTIMYSCWHEKADERPTFKI 250 (258)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHT-----TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHH
T ss_pred CCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHh-----CCCCCCcccccHHHHHHHHHHccCCHhHCcCHHH
Confidence 899999999999999999998 7878876554443322222 2233455667789999999999999999999999
Q ss_pred HHHHhcc
Q 019495 155 LVTALSP 161 (340)
Q Consensus 155 i~~~L~~ 161 (340)
|++.|..
T Consensus 251 il~~L~d 257 (258)
T d1k2pa_ 251 LLSNILD 257 (258)
T ss_dssp HHHHHHC
T ss_pred HHHHhhC
Confidence 9998754
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.8e-36 Score=259.61 Aligned_cols=150 Identities=20% Similarity=0.277 Sum_probs=125.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
+++.....++.||+.||.|||+++ ||||||||+||+++.+|.+||+|||+++..... .+..||+.|+|||++.
T Consensus 105 l~e~~~~~~~~qi~~al~ylH~~~-iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~ 183 (288)
T d1uu3a_ 105 FDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 183 (288)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECC----------CCCCGGGCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhhcccc-EEcCcCCccccccCCCceEEecccccceecccCCcccccccccCCccccCceeec
Confidence 577888999999999999999999 999999999999999999999999999865432 2356899999999999
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+..++.++|||||||++|||++|+.||.......+....... ...+|..+++.+.+||.+||+.||++|||++|
T Consensus 184 ~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e 257 (288)
T d1uu3a_ 184 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL------EYDFPEKFFPKARDLVEKLLVLDATKRLGCEE 257 (288)
T ss_dssp TCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTT------CCCCCTTCCHHHHHHHHTTSCSSGGGSTTSGG
T ss_pred cCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcC------CCCCCccCCHHHHHHHHHHccCCHhHCcCHHH
Confidence 889999999999999999999999999876544433322221 12345567789999999999999999999998
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
++.
T Consensus 258 ~~~ 260 (288)
T d1uu3a_ 258 MEG 260 (288)
T ss_dssp GTC
T ss_pred HcC
Confidence 743
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.6e-36 Score=262.57 Aligned_cols=156 Identities=21% Similarity=0.253 Sum_probs=128.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
|+|..++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++...+. .+..+++.|+|||++.
T Consensus 137 l~~~~~~~i~~qi~~gl~ylH~~~-ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 215 (301)
T d1lufa_ 137 LSCAEQLCIARQVAAGMAYLSERK-FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIF 215 (301)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhhcccCC-eEeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHc
Confidence 578899999999999999999999 999999999999999999999999998754322 2345788999999999
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCC-CCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKH-IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
+..++.++|||||||++|||++|.. ||.......+....... .....+..+++.+.+|+.+||+.||++|||+.
T Consensus 216 ~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~-----~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ 290 (301)
T d1lufa_ 216 YNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDG-----NILACPENCPLELYNLMRLCWSKLPADRPSFC 290 (301)
T ss_dssp HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred cCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHcC-----CCCCCCccchHHHHHHHHHHcCCChhHCcCHH
Confidence 8899999999999999999999964 55544333332221111 12345666778999999999999999999999
Q ss_pred HHHHHhccc
Q 019495 154 SLVTALSPL 162 (340)
Q Consensus 154 ~i~~~L~~~ 162 (340)
+|++.|+++
T Consensus 291 ev~~~L~~i 299 (301)
T d1lufa_ 291 SIHRILQRM 299 (301)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999999876
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6e-36 Score=264.19 Aligned_cols=159 Identities=15% Similarity=0.231 Sum_probs=129.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
++|.++++++.||+.||.|||+++ ||||||||+||+++.++.+||+|||+++...... ...||+.|+|||++.
T Consensus 108 ~~~~~~~~i~~qi~~gl~yLH~~~-iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~ 186 (317)
T d1xkka_ 108 IGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 186 (317)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcC-cccCcchhhcceeCCCCCeEeeccccceecccccccccccccccCccccChHHHh
Confidence 578899999999999999999999 9999999999999999999999999988654332 235789999999999
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
++.++.++|||||||++|||+| |..||.......+.... ........|..++..+.+++.+||+.||.+|||+.
T Consensus 187 ~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i-----~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ 261 (317)
T d1xkka_ 187 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 261 (317)
T ss_dssp HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHH-----HHTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred cCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHH-----HcCCCCCCCcccCHHHHHHHHHhCCCChhhCcCHH
Confidence 8999999999999999999999 66666554333222211 11223345666788999999999999999999999
Q ss_pred HHHHHhcccccC
Q 019495 154 SLVTALSPLQKE 165 (340)
Q Consensus 154 ~i~~~L~~~~~~ 165 (340)
+|+..|..+...
T Consensus 262 eil~~l~~~~~~ 273 (317)
T d1xkka_ 262 ELIIEFSKMARD 273 (317)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHhC
Confidence 999988877543
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-35 Score=253.39 Aligned_cols=152 Identities=18% Similarity=0.277 Sum_probs=121.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-CccccCCCCCCEEec-CCCCeEEeccCCCccCCCC--CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~-~iiH~dlk~~nill~-~~~~~kl~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~ 76 (340)
+++.+...++.||+.||.|||+++ +||||||||+|||++ .++.+||+|||+++..... .+..||+.|||||++. +
T Consensus 109 ~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~~~~~GT~~Y~aPE~~~-~ 187 (270)
T d1t4ha_ 109 MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYE-E 187 (270)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGG-T
T ss_pred ccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCccCCcccCccccCHHHhC-C
Confidence 577888999999999999999975 499999999999996 5789999999999865443 3457999999999997 4
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHH-HhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i 155 (340)
+++.++|||||||++|||++|+.||....... +......... ...++...++++.++|.+||+.||++|||+.|+
T Consensus 188 ~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~el 263 (270)
T d1t4ha_ 188 KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK----PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDL 263 (270)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC----CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCC----CcccCccCCHHHHHHHHHHccCCHhHCcCHHHH
Confidence 69999999999999999999999987543222 2111111111 112333456789999999999999999999999
Q ss_pred HH
Q 019495 156 VT 157 (340)
Q Consensus 156 ~~ 157 (340)
++
T Consensus 264 l~ 265 (270)
T d1t4ha_ 264 LN 265 (270)
T ss_dssp HT
T ss_pred hC
Confidence 75
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.8e-36 Score=257.77 Aligned_cols=157 Identities=22% Similarity=0.320 Sum_probs=121.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-----ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~ 75 (340)
+++..++.++.||++||.|||+++ ||||||||+||+++.++.+||+|||+++...... ...+|+.|+|||++.+
T Consensus 105 l~~~~~~~~~~qi~~gl~ylH~~~-iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~ 183 (273)
T d1mp8a_ 105 LDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 183 (273)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhhhcccC-eeccccchhheeecCCCcEEEccchhheeccCCcceeccceecCcccchhhHhcc
Confidence 578899999999999999999999 9999999999999999999999999998654332 2356889999999998
Q ss_pred CCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+.++.++|||||||++|||+| |.+||.......+...... ....+++..++..+.+||.+||+.||++|||+.+
T Consensus 184 ~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~e 258 (273)
T d1mp8a_ 184 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN-----GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTE 258 (273)
T ss_dssp CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHH
Confidence 899999999999999999998 7777765443332222111 1123456677889999999999999999999999
Q ss_pred HHHHhcccc
Q 019495 155 LVTALSPLQ 163 (340)
Q Consensus 155 i~~~L~~~~ 163 (340)
|+..|+.+.
T Consensus 259 i~~~L~~i~ 267 (273)
T d1mp8a_ 259 LKAQLSTIL 267 (273)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999888764
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.6e-36 Score=257.39 Aligned_cols=157 Identities=20% Similarity=0.264 Sum_probs=129.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-------ccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------SYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~y~aPE~~ 73 (340)
|+|..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...++..|+|||++
T Consensus 108 l~~~~~~~~~~qi~~gl~ylH~~~-iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 186 (273)
T d1u46a_ 108 FLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186 (273)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhhhCC-EeeeeecHHHhccccccceeeccchhhhhcccCCCcceecCccccCcccCCHHHH
Confidence 578899999999999999999999 9999999999999999999999999998764432 22467889999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
.+..++.++|||||||++|||+| |..||.+............. ....+.+..++..+.+++.+||+.||++|||+
T Consensus 187 ~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~----~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~ 262 (273)
T d1u46a_ 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE----GERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 262 (273)
T ss_dssp HHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTS----CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred hCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhC----CCCCCCcccccHHHHHHHHHHcCCChhHCcCH
Confidence 98889999999999999999998 88888765544433222221 22334456677899999999999999999999
Q ss_pred HHHHHHhccc
Q 019495 153 KSLVTALSPL 162 (340)
Q Consensus 153 ~~i~~~L~~~ 162 (340)
.+|++.|.+.
T Consensus 263 ~ei~~~L~~~ 272 (273)
T d1u46a_ 263 VALRDFLLEA 272 (273)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999988754
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.8e-35 Score=257.32 Aligned_cols=154 Identities=18% Similarity=0.236 Sum_probs=117.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEec---CCCCeEEeccCCCccCCCC---CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD---EDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~---~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~ 74 (340)
|++.....++.||+.||.|||+++ ||||||||+||++. .++.+||+|||+++..... .+..||+.|||||++.
T Consensus 104 l~e~~~~~~~~qi~~al~ylH~~~-iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~ 182 (307)
T d1a06a_ 104 YTERDASRLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA 182 (307)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCC------------------CTTSCHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHhhhhce-eeeEEecccceeecccCCCceEEEeccceeEEccCCCeeeeeeeCccccCcHHHc
Confidence 578889999999999999999999 99999999999994 5789999999999866543 3457899999999999
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 154 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 154 (340)
+..++.++|||||||++|||++|..||.+.....+......... .+....+..+++.+.+++.+||+.||++|||+.|
T Consensus 183 ~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e 260 (307)
T d1a06a_ 183 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEY--EFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQ 260 (307)
T ss_dssp TCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCC--CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred CCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCC--CCCCccccCCCHHHHHHHHHHccCCHhHCcCHHH
Confidence 88899999999999999999999999987654443333222211 1222334556789999999999999999999999
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
+++
T Consensus 261 il~ 263 (307)
T d1a06a_ 261 ALQ 263 (307)
T ss_dssp HHH
T ss_pred Hhc
Confidence 986
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-35 Score=252.71 Aligned_cols=157 Identities=24% Similarity=0.379 Sum_probs=125.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC-ccccCCcccCcccccCCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-SYSTNLAFTPPEYLRTGRVT 79 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~ 79 (340)
++|.++++|+.||+.||.|||+++ |+||||||+||+++.+|.+|++|||+++...... ...++..|+|||++.++.++
T Consensus 100 l~~~~~~~i~~~i~~al~ylH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~~~~~y~aPE~l~~~~~t 178 (262)
T d1byga_ 100 LGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFS 178 (262)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC------------CCTTTSCHHHHHHCCCC
T ss_pred CCHHHHHHHHHHHHhhccccccCc-eeccccchHhheecCCCCEeecccccceecCCCCccccccccCCChHHHhCCCCC
Confidence 578999999999999999999999 9999999999999999999999999998755443 44678899999999988999
Q ss_pred CCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 019495 80 PESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 158 (340)
Q Consensus 80 ~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 158 (340)
.++|||||||++|||+| |+.|+.......+.... ......+++..+++.+.+++.+||+.||++|||+.++++.
T Consensus 179 ~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i-----~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~ 253 (262)
T d1byga_ 179 TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-----EKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ 253 (262)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHH-----TTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHH-----HcCCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence 99999999999999998 56655543332222221 1123445666777899999999999999999999999999
Q ss_pred hcccc
Q 019495 159 LSPLQ 163 (340)
Q Consensus 159 L~~~~ 163 (340)
|+.+.
T Consensus 254 L~~i~ 258 (262)
T d1byga_ 254 LEHIK 258 (262)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98764
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-34 Score=256.38 Aligned_cols=150 Identities=19% Similarity=0.327 Sum_probs=127.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++..... ...+||+.|+|||++.+.
T Consensus 102 ~~e~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~ 180 (337)
T d1o6la_ 102 FTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 180 (337)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSS
T ss_pred CcHHHHHHHHHHHhhhhhhhhhcC-ccccccCHHHeEecCCCCEEEeecccccccccCCcccccceeCHHHhhhhhccCC
Confidence 456778889999999999999999 999999999999999999999999999865432 346789999999999999
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC-----
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN----- 151 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps----- 151 (340)
.++.++|+||+||++|||++|+.||.+.....+....... ...+|..+++++.+||.+||+.||.+|++
T Consensus 181 ~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~ 254 (337)
T d1o6la_ 181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSD 254 (337)
T ss_dssp CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTT
T ss_pred CCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcC------CCCCCccCCHHHHHHHHhhccCCchhhccccccc
Confidence 9999999999999999999999999877655443333222 22456667789999999999999999995
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
++++++
T Consensus 255 ~~eil~ 260 (337)
T d1o6la_ 255 AKEVME 260 (337)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 777765
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-35 Score=260.79 Aligned_cols=156 Identities=20% Similarity=0.282 Sum_probs=120.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhC-CCccccCCCCCCEEecCCCCeEEeccCCCccCCC--CCccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~-~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~--~~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.....++.||+.||.|||++ + |+||||||+|||++.+|.+||+|||+++...+ ..+..||+.|+|||++.+..
T Consensus 101 l~~~~~~~~~~qil~aL~yLH~~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~GT~~Y~APEvl~~~~ 179 (322)
T d1s9ja_ 101 IPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTH 179 (322)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---CCSSCCCCHHHHHCSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCC-EEccccCHHHeeECCCCCEEEeeCCCccccCCCccccccCCccccCchHHcCCC
Confidence 56788899999999999999985 7 99999999999999999999999999986432 34568999999999999999
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccc-------------------------------------cc
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT-------------------------------------DS 120 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~ 120 (340)
++.++||||+||++|||++|+.||.+............... ..
T Consensus 180 y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (322)
T d1s9ja_ 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVN 259 (322)
T ss_dssp CCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------------------CCCCHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhc
Confidence 99999999999999999999999865422111000000000 00
Q ss_pred ccCCCCC-chhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 121 CLEGQFT-DDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 121 ~~~~~~~-~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
......+ ...+.++.+++.+||+.||++|||++++++
T Consensus 260 ~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~ 297 (322)
T d1s9ja_ 260 EPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297 (322)
T ss_dssp SCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 0001111 124578999999999999999999999986
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=7.9e-35 Score=259.76 Aligned_cols=150 Identities=16% Similarity=0.211 Sum_probs=127.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-CccccCCcccCcccccCCCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVT 79 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~ 79 (340)
|++.+...++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++..... .+..||+.|||||++.+..++
T Consensus 138 l~e~~~~~i~~qi~~aL~yLH~~~-iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~~~Gt~~Y~APE~~~~~~~~ 216 (350)
T d1rdqe_ 138 FSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYN 216 (350)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EecCcCCHHHcccCCCCCEEeeeceeeeecccccccccCccccCCHHHHcCCCCC
Confidence 567888999999999999999999 999999999999999999999999999876544 456799999999999988899
Q ss_pred CCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC-----CHHH
Q 019495 80 PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP-----NPKS 154 (340)
Q Consensus 80 ~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s~~~ 154 (340)
.++|||||||++|||+||+.||.+.....+....... ...++..+++.+.++|.+||+.||.+|+ |+++
T Consensus 217 ~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~e 290 (350)
T d1rdqe_ 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG------KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290 (350)
T ss_dssp THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHH
T ss_pred ccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcC------CCCCCccCCHHHHHHHHHHhhhCHHhccccccccHHH
Confidence 9999999999999999999999876544333322222 1234556678999999999999999994 8889
Q ss_pred HHH
Q 019495 155 LVT 157 (340)
Q Consensus 155 i~~ 157 (340)
++.
T Consensus 291 ll~ 293 (350)
T d1rdqe_ 291 IKN 293 (350)
T ss_dssp HHT
T ss_pred HHc
Confidence 875
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.5e-34 Score=254.57 Aligned_cols=149 Identities=22% Similarity=0.289 Sum_probs=126.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-CccccCCcccCcccccCCCCCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVTP 80 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~ 80 (340)
++.....++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++..... .+..||+.|||||++.+..++.
T Consensus 102 ~~~~~~~~~~qi~~al~~lH~~~-iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~Gt~~Y~APE~l~~~~y~~ 180 (316)
T d1fota_ 102 PNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNK 180 (316)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCT
T ss_pred cccHHHHHHHHHHHhhhhhccCc-EEccccCchheeEcCCCCEEEecCccceEeccccccccCcccccCHHHHcCCCCCc
Confidence 56677789999999999999999 999999999999999999999999999876544 3567999999999999888999
Q ss_pred CcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC-----CHHHH
Q 019495 81 ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP-----NPKSL 155 (340)
Q Consensus 81 ~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s~~~i 155 (340)
++|||||||++|+|++|+.||.+.....+....... ...+|...++++.+++.+||+.||.+|+ |++++
T Consensus 181 ~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~i 254 (316)
T d1fota_ 181 SIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA------ELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDV 254 (316)
T ss_dssp THHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHH
T ss_pred hhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHH
Confidence 999999999999999999999876554433332222 1234556678899999999999999996 88888
Q ss_pred HH
Q 019495 156 VT 157 (340)
Q Consensus 156 ~~ 157 (340)
++
T Consensus 255 l~ 256 (316)
T d1fota_ 255 KN 256 (316)
T ss_dssp HT
T ss_pred Hc
Confidence 75
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.7e-35 Score=255.82 Aligned_cols=157 Identities=23% Similarity=0.330 Sum_probs=131.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
|++.+++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++..... ....+++.|+|||++.
T Consensus 132 l~~~~~~~~~~qi~~al~ylH~~~-ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~ 210 (299)
T d1fgka_ 132 LSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF 210 (299)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhhhCC-EEeeeecccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhc
Confidence 578899999999999999999999 999999999999999999999999998865433 2345788999999999
Q ss_pred CCCCCCCcceehHHHHHHHHhh-CCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
++.++.++|||||||++|||++ |..||.......+... .........|..+++.+.+||.+||+.||.+|||+.
T Consensus 211 ~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~-----i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~ 285 (299)
T d1fgka_ 211 DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL-----LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK 285 (299)
T ss_dssp HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH-----HHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHH-----HHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHH
Confidence 9999999999999999999998 5666655444332221 112233455667788999999999999999999999
Q ss_pred HHHHHhcccc
Q 019495 154 SLVTALSPLQ 163 (340)
Q Consensus 154 ~i~~~L~~~~ 163 (340)
+|++.|+.+.
T Consensus 286 eil~~L~~i~ 295 (299)
T d1fgka_ 286 QLVEDLDRIV 295 (299)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998763
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-34 Score=255.01 Aligned_cols=160 Identities=20% Similarity=0.249 Sum_probs=131.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
|+|..++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++..... ....+|..|+|||.+.++.
T Consensus 124 l~~~~~~~~~~qia~gl~~lH~~~-iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 202 (309)
T d1fvra_ 124 LSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSV 202 (309)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCE
T ss_pred CCHHHHHHHHHHHHHHHHhhhcCC-ccccccccceEEEcCCCceEEccccccccccccccccceecCCcccchHHhccCC
Confidence 578899999999999999999999 999999999999999999999999998765433 2346789999999999889
Q ss_pred CCCCcceehHHHHHHHHhhCCC-CCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKH-IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
++.++|||||||++|||++|.. ||.......+...... ......+..+++++.+||.+||+.||++|||+.+|+
T Consensus 203 ~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil 277 (309)
T d1fvra_ 203 YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-----GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 277 (309)
T ss_dssp ECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGG-----TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHh-----cCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 9999999999999999999875 4544433333222111 223445667789999999999999999999999999
Q ss_pred HHhcccccCC
Q 019495 157 TALSPLQKET 166 (340)
Q Consensus 157 ~~L~~~~~~~ 166 (340)
+.|+.+....
T Consensus 278 ~~L~~i~~~~ 287 (309)
T d1fvra_ 278 VSLNRMLEER 287 (309)
T ss_dssp HHHHHHHHSS
T ss_pred HHHHHHHhcC
Confidence 9998887654
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.5e-34 Score=250.52 Aligned_cols=159 Identities=17% Similarity=0.271 Sum_probs=125.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-------CccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-------KSYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~y~aPE~~ 73 (340)
+++.+...++.||+.||.|||+++ ||||||||+||+++.++.++++|||.++..... .+..||+.|+|||++
T Consensus 108 l~~~~~~~i~~qi~~al~~lH~~~-iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~ 186 (277)
T d1o6ya_ 108 MTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 186 (277)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTSCEEECCCTTCEECC----------------TTCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-ccCccccCcccccCccccceeehhhhhhhhccccccccccccccCcccccCHHHH
Confidence 578899999999999999999999 999999999999999999999999987654322 234689999999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCC-CH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP-NP 152 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-s~ 152 (340)
.+..++.++|||||||++|||+||+.||...............-. .........+++.+.++|.+||+.||++|| |+
T Consensus 187 ~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa 264 (277)
T d1o6ya_ 187 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDP--IPPSARHEGLSADLDAVVLKALAKNPENRYQTA 264 (277)
T ss_dssp TTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCC--CCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSH
T ss_pred cCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCC--CCCchhccCCCHHHHHHHHHHccCCHhHCHhHH
Confidence 988899999999999999999999999987654443333222211 111123445678999999999999999999 89
Q ss_pred HHHHHHhccc
Q 019495 153 KSLVTALSPL 162 (340)
Q Consensus 153 ~~i~~~L~~~ 162 (340)
+++++.|.++
T Consensus 265 ~~l~~~l~r~ 274 (277)
T d1o6ya_ 265 AEMRADLVRV 274 (277)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999888765
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-34 Score=255.03 Aligned_cols=159 Identities=21% Similarity=0.259 Sum_probs=128.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC--------ccccCCcccCcccc
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--------SYSTNLAFTPPEYL 73 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~--------~~~~~~~y~aPE~~ 73 (340)
++..++.++.|++.||.|||+.+ |+||||||+|||+++++.+||+|||+++...... ...+|+.|+|||.+
T Consensus 128 ~~~~~~~i~~qia~gL~~lH~~~-iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 206 (311)
T d1r0pa_ 128 TVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 206 (311)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHH
T ss_pred hHHHHHHHHHHHHHhhhhhcccC-cccCCccHHhEeECCCCCEEEecccchhhccccccccceecccccccccccChHHH
Confidence 57789999999999999999999 9999999999999999999999999998654331 23568899999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
.++.++.++||||||+++|||+||+.||........ ....+. .......|..++..+.++|.+||+.||++||++.
T Consensus 207 ~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~---~~~~i~-~g~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ 282 (311)
T d1r0pa_ 207 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 282 (311)
T ss_dssp HHCCCCHHHHHHHHHHHHHHHHTTSCCSCC---------CHHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred hcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHH---HHHHHH-cCCCCCCcccCcHHHHHHHHHHcCCCHhHCcCHH
Confidence 989999999999999999999998887765322110 001111 1122334556678999999999999999999999
Q ss_pred HHHHHhcccccC
Q 019495 154 SLVTALSPLQKE 165 (340)
Q Consensus 154 ~i~~~L~~~~~~ 165 (340)
+|++.|+.+...
T Consensus 283 ei~~~L~~i~~~ 294 (311)
T d1r0pa_ 283 ELVSRISAIFST 294 (311)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999999888654
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=2.6e-34 Score=256.48 Aligned_cols=154 Identities=16% Similarity=0.148 Sum_probs=127.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEec--CCCCeEEeccCCCccCCCCC---ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~--~~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~ 75 (340)
|++.+...|+.||+.||.|||++| ||||||||+|||++ .++.+||+|||+++...... +..+|+.|+|||++.+
T Consensus 124 l~e~~~~~i~~qi~~aL~ylH~~~-iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~ 202 (352)
T d1koba_ 124 MSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDR 202 (352)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eeecccccccccccccCCCeEEEeecccceecCCCCceeeccCcccccCHHHHcC
Confidence 477889999999999999999999 99999999999997 67899999999998776543 3468999999999998
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i 155 (340)
..++.++|||||||++|+|+||+.||.+.............. ..+.......+++++.+||.+||+.||.+|||+.++
T Consensus 203 ~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~ei 280 (352)
T d1koba_ 203 EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCD--WEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDA 280 (352)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCC--CCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 899999999999999999999999998754443322222211 112223344567899999999999999999999999
Q ss_pred HH
Q 019495 156 VT 157 (340)
Q Consensus 156 ~~ 157 (340)
++
T Consensus 281 l~ 282 (352)
T d1koba_ 281 LE 282 (352)
T ss_dssp HT
T ss_pred hc
Confidence 86
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=2.7e-34 Score=256.13 Aligned_cols=154 Identities=16% Similarity=0.122 Sum_probs=125.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEec--CCCCeEEeccCCCccCCCCC---ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~--~~~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~ 75 (340)
|++..+..|+.||+.||.|||+++ ||||||||+|||++ .++.+||+|||+++...... +..||+.|||||++.+
T Consensus 121 l~e~~~~~i~~qi~~aL~ylH~~~-iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~ 199 (350)
T d1koaa2 121 MSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEG 199 (350)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcC-CeeeeechhHeeeccCCCCeEEEeecchheecccccccceecCcccccCHHHHcC
Confidence 578889999999999999999999 99999999999995 46789999999998765443 4578999999999998
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i 155 (340)
..++.++|||||||++|+|++|+.||.+.....+......... .+.......++..+.++|.+||+.||++|||+.++
T Consensus 200 ~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~ei 277 (350)
T d1koaa2 200 KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW--NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQA 277 (350)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred CCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCcccccCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 8899999999999999999999999976544333222211111 11112223456889999999999999999999999
Q ss_pred HH
Q 019495 156 VT 157 (340)
Q Consensus 156 ~~ 157 (340)
++
T Consensus 278 l~ 279 (350)
T d1koaa2 278 LE 279 (350)
T ss_dssp HH
T ss_pred hc
Confidence 86
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.4e-34 Score=250.13 Aligned_cols=156 Identities=19% Similarity=0.258 Sum_probs=124.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.....++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++..... ....||+.|+|||++.+..
T Consensus 113 ~~~~~~~~~~~qi~~aL~yLH~~~-ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~ 191 (305)
T d1blxa_ 113 VPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 191 (305)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-EEecCCCccEEEEcCCCCeeecchhhhhhhcccccCCCcccChhhcCcchhcCCC
Confidence 467788899999999999999999 999999999999999999999999998765433 3567899999999999899
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccc---------------------ccccCCCCCchhHHHHHH
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT---------------------DSCLEGQFTDDDGTELVR 136 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~l~~ 136 (340)
++.++||||+||++|||++|+.||.+............... .......++...++.+.+
T Consensus 192 y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~d 271 (305)
T d1blxa_ 192 YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKD 271 (305)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHH
T ss_pred CChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHH
Confidence 99999999999999999999999976543222111111000 000011233445688999
Q ss_pred HHHHhhccCCCCCCCHHHHHH
Q 019495 137 LASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 137 li~~cl~~~p~~Rps~~~i~~ 157 (340)
|+.+||+.||++|||+.|++.
T Consensus 272 li~~mL~~dP~~R~sa~e~L~ 292 (305)
T d1blxa_ 272 LLLKCLTFNPAKRISAYSALS 292 (305)
T ss_dssp HHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHCcCChhHCcCHHHHhc
Confidence 999999999999999999985
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=6.7e-34 Score=255.03 Aligned_cols=153 Identities=22% Similarity=0.248 Sum_probs=123.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--CccccCCcccCcccccC-CC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRT-GR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~-~~ 77 (340)
+++.....++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++..... ....||+.|+|||++.. ..
T Consensus 104 ~~e~~~~~~~~qi~~aL~ylH~~~-iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~~~~~~GT~~y~APE~~~~~~~ 182 (364)
T d1omwa3 104 FSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVA 182 (364)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSSSCEEECCCTTCEECSSSCCCSCCSCGGGCCHHHHSTTCC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHCC-ccceeeccceeEEcCCCcEEEeeeceeeecCCCcccccccccccchhHHhhcCCC
Confidence 356788899999999999999999 999999999999999999999999999876544 34579999999999975 46
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC-----H
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN-----P 152 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps-----~ 152 (340)
++.++|||||||++|||+||+.||.......... ...... .....++..+++.+.++|.+||+.||++||| +
T Consensus 183 ~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~-~~~~~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a 259 (364)
T d1omwa3 183 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTL--TMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGA 259 (364)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHH-HHHHSS--SCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTH
T ss_pred CCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhcc--cCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCH
Confidence 8999999999999999999999987543221111 001111 1122345567789999999999999999999 6
Q ss_pred HHHHH
Q 019495 153 KSLVT 157 (340)
Q Consensus 153 ~~i~~ 157 (340)
+++++
T Consensus 260 ~eil~ 264 (364)
T d1omwa3 260 QEVKE 264 (364)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 78875
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-34 Score=251.51 Aligned_cols=158 Identities=18% Similarity=0.262 Sum_probs=128.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC------CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~ 74 (340)
++|..++.++.||+.||.|||+++ |+||||||+|||++.++++||+|||+++..... ....+|+.|++||.+.
T Consensus 130 ~~~~~~~~i~~~ia~gl~~LH~~~-ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~ 208 (308)
T d1p4oa_ 130 PSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK 208 (308)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCC-eeeceEcCCceeecCCceEEEeecccceeccCCcceeeccceecccccCCHHHHc
Confidence 467889999999999999999999 999999999999999999999999999865432 2335789999999999
Q ss_pred CCCCCCCcceehHHHHHHHHhhCC-CCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGK-HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
++.++.++||||||+++|||+||+ .|+.+.....+..... + ......+..++..+.++|.+||+.||++|||++
T Consensus 209 ~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~----~-~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ 283 (308)
T d1p4oa_ 209 DGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM----E-GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFL 283 (308)
T ss_dssp HCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH----T-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred cCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHH----h-CCCCCCcccchHHHHHHHHHHcCCChhHCcCHH
Confidence 999999999999999999999996 4554433322222111 1 112334566778999999999999999999999
Q ss_pred HHHHHhccccc
Q 019495 154 SLVTALSPLQK 164 (340)
Q Consensus 154 ~i~~~L~~~~~ 164 (340)
+|++.|++...
T Consensus 284 ~il~~L~~~~~ 294 (308)
T d1p4oa_ 284 EIISSIKEEME 294 (308)
T ss_dssp HHHHHHGGGSC
T ss_pred HHHHHHHHhcC
Confidence 99999987643
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-34 Score=253.08 Aligned_cols=156 Identities=16% Similarity=0.187 Sum_probs=121.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC---CCCeEEeccCCCccCCCC---CccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~---~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~ 74 (340)
|++.+...|+.||+.||.|||+++ |+||||||+|||++. ++.+||+|||+++..... ....||+.|||||++.
T Consensus 108 l~e~~~~~i~~qi~~al~ylH~~~-iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~ 186 (335)
T d2ozaa1 108 FTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG 186 (335)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHcC-CccccccccccccccccccccccccccceeeeccCCCccccccCCcccCCcHHHc
Confidence 467889999999999999999999 999999999999975 567999999999865443 3457899999999999
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccccc--CCCCCchhHHHHHHHHHHhhccCCCCCCCH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL--EGQFTDDDGTELVRLASRCLQYEPRERPNP 152 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 152 (340)
+..++.++|||||||++|+|+||+.||.+.............+..... .......+++.+.+||.+||+.||++|||+
T Consensus 187 ~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~ 266 (335)
T d2ozaa1 187 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI 266 (335)
T ss_dssp GGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred CCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCH
Confidence 888999999999999999999999999654322211111111111111 111112356789999999999999999999
Q ss_pred HHHHH
Q 019495 153 KSLVT 157 (340)
Q Consensus 153 ~~i~~ 157 (340)
.+++.
T Consensus 267 ~eil~ 271 (335)
T d2ozaa1 267 TEFMN 271 (335)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 99986
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.8e-34 Score=248.79 Aligned_cols=162 Identities=20% Similarity=0.219 Sum_probs=123.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.+...++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+|+.|+|||++.++
T Consensus 97 l~~~~~~~~~~qil~aL~~lH~~~-iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 175 (299)
T d1ua2a_ 97 LTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGA 175 (299)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHhhccc-eecccCCcceEEecCCCccccccCccccccCCCcccccceecChhhccHHHHccC
Confidence 456678899999999999999999 999999999999999999999999999765443 244689999999998754
Q ss_pred -CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccc--------------ccCCC--------CCchhHHH
Q 019495 77 -RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS--------------CLEGQ--------FTDDDGTE 133 (340)
Q Consensus 77 -~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~--------~~~~~~~~ 133 (340)
.++.++|||||||++|||++|..||...............+..+ ..... .....++.
T Consensus 176 ~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 255 (299)
T d1ua2a_ 176 RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDD 255 (299)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHH
T ss_pred CCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHH
Confidence 57999999999999999999998887654332211111100000 00000 01234578
Q ss_pred HHHHHHHhhccCCCCCCCHHHHHHHhcccccC
Q 019495 134 LVRLASRCLQYEPRERPNPKSLVTALSPLQKE 165 (340)
Q Consensus 134 l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 165 (340)
+.+|+.+||+.||++|||++|+++ +++...
T Consensus 256 ~~dll~~~L~~dP~~R~sa~e~L~--Hp~f~~ 285 (299)
T d1ua2a_ 256 LLDLIQGLFLFNPCARITATQALK--MKYFSN 285 (299)
T ss_dssp HHHHHHHHHCSSTTTSCCHHHHHT--SGGGTS
T ss_pred HHHHHHHHccCChhhCcCHHHHhC--CHhhCC
Confidence 999999999999999999999985 344443
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-34 Score=247.82 Aligned_cols=144 Identities=23% Similarity=0.400 Sum_probs=120.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC-CCCeEEeccCCCccCCCC--CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~-~~~~kl~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.+...++.||+.||.|||+++ |+||||||+||+++. ++.+||+|||+++..... .+..||+.|+|||++.+..
T Consensus 107 l~e~~~~~~~~qi~~al~~lH~~~-iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~~ 185 (273)
T d1xwsa_ 107 LQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHR 185 (273)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-CccccCcccceEEecCCCeEEECccccceecccccccccccCCCcCCHHHHcCCC
Confidence 577889999999999999999999 999999999999985 578999999999865443 3567899999999998766
Q ss_pred C-CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 019495 78 V-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 156 (340)
Q Consensus 78 ~-~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 156 (340)
+ +.++||||+||++|||++|+.||..... +... ...++..+++++.++|.+||+.||++|||+++++
T Consensus 186 ~~~~~~DiwSlGvilyell~g~~Pf~~~~~--i~~~----------~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil 253 (273)
T d1xwsa_ 186 YHGRSAAVWSLGILLYDMVCGDIPFEHDEE--IIRG----------QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQ 253 (273)
T ss_dssp BCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HHHC----------CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCcccccccceeeehhHhhCCCCCCCchH--Hhhc----------ccCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHh
Confidence 4 6679999999999999999999875321 1111 1123445668999999999999999999999998
Q ss_pred H
Q 019495 157 T 157 (340)
Q Consensus 157 ~ 157 (340)
+
T Consensus 254 ~ 254 (273)
T d1xwsa_ 254 N 254 (273)
T ss_dssp T
T ss_pred c
Confidence 5
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.1e-34 Score=249.91 Aligned_cols=150 Identities=21% Similarity=0.305 Sum_probs=126.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
+++.+...++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++..... ....||+.|+|||++.++
T Consensus 100 ~~e~~~~~~~~qi~~al~ylH~~~-iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 178 (320)
T d1xjda_ 100 FDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQ 178 (320)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeeccCcccceeecCCCceeccccchhhhcccccccccccCCCCCcCCHHHHcCC
Confidence 467788999999999999999999 999999999999999999999999999865432 235689999999999999
Q ss_pred CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH-HH
Q 019495 77 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK-SL 155 (340)
Q Consensus 77 ~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~-~i 155 (340)
.++.++|||||||++|+|++|+.||.+.....+....... ...+|..+++.+.+||.+||+.||++||++. ++
T Consensus 179 ~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l 252 (320)
T d1xjda_ 179 KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD------NPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDI 252 (320)
T ss_dssp CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCG
T ss_pred CCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCccCCHHHHHHHHHhcccCCCCCcCHHHHH
Confidence 9999999999999999999999999876554443332221 2234556778999999999999999999996 67
Q ss_pred HH
Q 019495 156 VT 157 (340)
Q Consensus 156 ~~ 157 (340)
++
T Consensus 253 ~~ 254 (320)
T d1xjda_ 253 RQ 254 (320)
T ss_dssp GG
T ss_pred Hh
Confidence 54
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.4e-34 Score=249.69 Aligned_cols=158 Identities=20% Similarity=0.317 Sum_probs=128.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC------ccccCCcccCccccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 74 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~ 74 (340)
|++..++.++.||+.||.|||+++ +|||||||+||+++.++.+|++|||+++...... ...+|+.|+|||++.
T Consensus 142 l~~~~~~~~~~qi~~gl~~LH~~~-ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 220 (311)
T d1t46a_ 142 LDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF 220 (311)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-eeecccccccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhc
Confidence 578899999999999999999999 9999999999999999999999999998655432 245689999999999
Q ss_pred CCCCCCCcceehHHHHHHHHhhCCCCCC-cchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 75 TGRVTPESVIYSFGTLLLDLLSGKHIPP-SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 75 ~~~~~~~~Di~s~G~il~el~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
++.++.++|||||||++|||+|++.|+. ....... +..+.........+..++..+.+||.+||+.||++|||+.
T Consensus 221 ~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~ 296 (311)
T d1t46a_ 221 NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK----FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFK 296 (311)
T ss_dssp HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH----HHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHH----HHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHH
Confidence 8899999999999999999999555543 3222111 1111222233344556678999999999999999999999
Q ss_pred HHHHHhcccc
Q 019495 154 SLVTALSPLQ 163 (340)
Q Consensus 154 ~i~~~L~~~~ 163 (340)
+|++.|++..
T Consensus 297 ~il~~L~~~i 306 (311)
T d1t46a_ 297 QIVQLIEKQI 306 (311)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999998653
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=1.1e-33 Score=246.85 Aligned_cols=154 Identities=16% Similarity=0.179 Sum_probs=124.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC----CeEEeccCCCccCCCC---CccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~----~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~ 73 (340)
+++.....++.||+.||.|||+++ |+||||||+||+++.++ .+|++|||+++....+ .+..+|+.|+|||++
T Consensus 110 l~~~~~~~~~~qi~~al~yLH~~~-ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~ 188 (293)
T d1jksa_ 110 LTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 188 (293)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHH
T ss_pred cchhHHHHHHHHHHHHHHhhhhcc-eeecccccceEEEecCCCcccceEecchhhhhhcCCCccccccCCCCcccCHHHH
Confidence 578889999999999999999999 99999999999998776 4999999999876543 345789999999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHH
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 153 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 153 (340)
.+..++.++|||||||++|||++|+.||.+............... ......+..++..+.++|.+||+.||++|||++
T Consensus 189 ~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~ 266 (293)
T d1jksa_ 189 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY--EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQ 266 (293)
T ss_dssp TTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCC--CCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHH
T ss_pred cCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC--CCCchhcCCCCHHHHHHHHHHccCChhHCcCHH
Confidence 988899999999999999999999999977544433222211110 111112234567899999999999999999999
Q ss_pred HHHH
Q 019495 154 SLVT 157 (340)
Q Consensus 154 ~i~~ 157 (340)
+++.
T Consensus 267 eil~ 270 (293)
T d1jksa_ 267 DSLQ 270 (293)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9986
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.98 E-value=3e-33 Score=241.65 Aligned_cols=154 Identities=19% Similarity=0.213 Sum_probs=126.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccC--
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRT-- 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~-- 75 (340)
|++.+...++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...+. ....||+.|++||.+.+
T Consensus 107 l~e~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~ 185 (277)
T d1phka_ 107 LSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSM 185 (277)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcC-CcccccccceEEEcCCCCeEEccchheeEccCCCceeeeeccCCCCCHHHhhccc
Confidence 578899999999999999999999 999999999999999999999999999876543 34568999999999864
Q ss_pred ----CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC
Q 019495 76 ----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 151 (340)
Q Consensus 76 ----~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 151 (340)
..++.++||||+||++|+|++|+.||.+.............-. .........+++++.+++.+||+.||++|||
T Consensus 186 ~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s 263 (277)
T d1phka_ 186 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY--QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYT 263 (277)
T ss_dssp CTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCC
T ss_pred cccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCC--CCCCcccccCCHHHHHHHHHHccCChhHCcC
Confidence 2468899999999999999999999987654443322222211 1122233456789999999999999999999
Q ss_pred HHHHHH
Q 019495 152 PKSLVT 157 (340)
Q Consensus 152 ~~~i~~ 157 (340)
+.+|++
T Consensus 264 ~~eil~ 269 (277)
T d1phka_ 264 AEEALA 269 (277)
T ss_dssp HHHHTT
T ss_pred HHHHHc
Confidence 999875
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.98 E-value=2e-33 Score=246.18 Aligned_cols=163 Identities=15% Similarity=0.142 Sum_probs=125.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEec---CCCCeEEeccCCCccCCCC-----------CccccCCc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD---EDGNPRLSTFGLMKNSRDG-----------KSYSTNLA 66 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~---~~~~~kl~dfg~~~~~~~~-----------~~~~~~~~ 66 (340)
+++.+.+.++.||+.||+|||+++ ||||||||+||+++ .+..+|++|||+++..... .+..||+.
T Consensus 100 ~~~~~~~~~~~qi~~~l~~lH~~~-iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~ 178 (299)
T d1ckia_ 100 FSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTAR 178 (299)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSS
T ss_pred CcHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCcc
Confidence 578899999999999999999999 99999999999985 4557999999999865432 23468999
Q ss_pred ccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhh--hccccccccCCCCCchhHHHHHHHHHHhhcc
Q 019495 67 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN--LQMLTDSCLEGQFTDDDGTELVRLASRCLQY 144 (340)
Q Consensus 67 y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 144 (340)
|||||++.+..++.++|||||||++|||+||+.||............ ................+++++.+++.+||+.
T Consensus 179 y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~ 258 (299)
T d1ckia_ 179 YASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSL 258 (299)
T ss_dssp SCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHS
T ss_pred ccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccC
Confidence 99999999888999999999999999999999998654222111110 0000000001112334568899999999999
Q ss_pred CCCCCCCHHHHHHHhccccc
Q 019495 145 EPRERPNPKSLVTALSPLQK 164 (340)
Q Consensus 145 ~p~~Rps~~~i~~~L~~~~~ 164 (340)
+|++||+++++.+.|+.+..
T Consensus 259 ~p~~RP~~~~i~~~l~~~~~ 278 (299)
T d1ckia_ 259 RFDDKPDYSYLRQLFRNLFH 278 (299)
T ss_dssp CTTCCCCHHHHHHHHHHHHH
T ss_pred ChhHCcCHHHHHHHHHHHHH
Confidence 99999999999988887644
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=1.3e-33 Score=247.37 Aligned_cols=164 Identities=15% Similarity=0.206 Sum_probs=123.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHh--------CCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--------CccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTS--------KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--------KSYSTN 64 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~--------~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--------~~~~~~ 64 (340)
++|..+++++.|++.||.|+|+ ++ ||||||||+||||+.++.+||+|||+++..... ....||
T Consensus 97 l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~-IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt 175 (303)
T d1vjya_ 97 VTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 175 (303)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEECC----CCSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-eeccccCccceEEcCCCCeEEEecCccccccCCCcceeccccceecc
Confidence 5799999999999999999997 46 999999999999999999999999998865432 234689
Q ss_pred CcccCcccccCC------CCCCCcceehHHHHHHHHhhCCCCCCcch---------------hHHHhhhhhccccccccC
Q 019495 65 LAFTPPEYLRTG------RVTPESVIYSFGTLLLDLLSGKHIPPSHA---------------LDLIRDRNLQMLTDSCLE 123 (340)
Q Consensus 65 ~~y~aPE~~~~~------~~~~~~Di~s~G~il~el~~g~~~~~~~~---------------~~~~~~~~~~~~~~~~~~ 123 (340)
+.|+|||++.+. .++.++|||||||++|||+||..|+.... ...+..........+.+.
T Consensus 176 ~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 255 (303)
T d1vjya_ 176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIP 255 (303)
T ss_dssp GGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCC
T ss_pred cCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccCCCCC
Confidence 999999998753 25778999999999999999987653211 111111111111111111
Q ss_pred CC-CCchhHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccccC
Q 019495 124 GQ-FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 165 (340)
Q Consensus 124 ~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 165 (340)
.. .+......+.+++.+||+.||++|||+.+|++.|+.+...
T Consensus 256 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~ 298 (303)
T d1vjya_ 256 NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp GGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence 11 1223456799999999999999999999999999887643
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.9e-32 Score=239.66 Aligned_cols=156 Identities=20% Similarity=0.303 Sum_probs=121.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
|++.....++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++..... ....||+.|+|||++...
T Consensus 99 l~e~~~~~~~~qil~~L~yLH~~~-IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~ 177 (298)
T d1gz8a_ 99 IPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177 (298)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHhhcCC-EEccccCchheeecccCcceeccCCcceeccCCcccceeecccceeeehhhhccc
Confidence 578899999999999999999999 999999999999999999999999998765433 234789999999988765
Q ss_pred C-CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccc------------ccccCCC-----------CCchhHH
Q 019495 77 R-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT------------DSCLEGQ-----------FTDDDGT 132 (340)
Q Consensus 77 ~-~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~-----------~~~~~~~ 132 (340)
. ++.++||||+||++|+|++|+.||.+............... .+..... .....+.
T Consensus 178 ~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 257 (298)
T d1gz8a_ 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 257 (298)
T ss_dssp SSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCH
T ss_pred cCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCH
Confidence 5 57899999999999999999999876432221111100000 0000000 0123457
Q ss_pred HHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 133 ELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 133 ~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.+.+++.+||+.||++|||+.++++
T Consensus 258 ~~~dll~~mL~~dP~~R~t~~ell~ 282 (298)
T d1gz8a_ 258 DGRSLLSQMLHYDPNKRISAKAALA 282 (298)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHccCChhHCcCHHHHhC
Confidence 8999999999999999999999986
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.97 E-value=1.7e-32 Score=239.24 Aligned_cols=165 Identities=12% Similarity=0.089 Sum_probs=126.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecC-----CCCeEEeccCCCccCCCC-----------CccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-----DGNPRLSTFGLMKNSRDG-----------KSYSTN 64 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~-----~~~~kl~dfg~~~~~~~~-----------~~~~~~ 64 (340)
+++.+.+.++.|++.||.|||+++ ||||||||+||+++. ++.+||+|||+++..... .+..||
T Consensus 98 ~~~~~~~~i~~q~~~~l~~lH~~g-iiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT 176 (293)
T d1csna_ 98 FSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGT 176 (293)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSC
T ss_pred hhhHHHHHHHHHHHHHHHHHHHCC-ceeccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEc
Confidence 467889999999999999999999 999999999999964 577999999999864322 234689
Q ss_pred CcccCcccccCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHH--hhhhhccccccccCCCCCchhHHHHHHHHHHhh
Q 019495 65 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI--RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 142 (340)
Q Consensus 65 ~~y~aPE~~~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 142 (340)
+.|||||++.+..++.++|||||||++|||+||..||........ ....................+++++.+++..|+
T Consensus 177 ~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~ 256 (293)
T d1csna_ 177 ARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYAR 256 (293)
T ss_dssp TTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHH
T ss_pred hhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHh
Confidence 999999999988899999999999999999999999864321110 000000000000011122345578999999999
Q ss_pred ccCCCCCCCHHHHHHHhcccccCC
Q 019495 143 QYEPRERPNPKSLVTALSPLQKET 166 (340)
Q Consensus 143 ~~~p~~Rps~~~i~~~L~~~~~~~ 166 (340)
..+|++||+++.+.+.|+.+....
T Consensus 257 ~~~~~~rP~y~~l~~~l~~~~~~~ 280 (293)
T d1csna_ 257 NLAFDATPDYDYLQGLFSKVLERL 280 (293)
T ss_dssp HCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred cCCcccCcCHHHHHHHHHHHHHHc
Confidence 999999999999998888765443
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.8e-31 Score=238.62 Aligned_cols=156 Identities=24% Similarity=0.298 Sum_probs=121.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC-CeEEeccCCCccCCCC---CccccCCcccCcccccC-
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRT- 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~-~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~- 75 (340)
|++.+...++.||+.||+|||+++ |+||||||+|||++.++ .+||+|||+++..... .+..||+.|+|||.+.+
T Consensus 119 l~~~~~~~i~~qil~aL~yLH~~~-IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~ 197 (350)
T d1q5ka_ 119 LPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 197 (350)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcC-CcccCCCcceEEEecCCCceeEecccchhhccCCcccccccccccccChHHhhcc
Confidence 577888999999999999999999 99999999999999775 7999999998875443 34578999999998765
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcc-----------------------ccccccCCCCCchhHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM-----------------------LTDSCLEGQFTDDDGT 132 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~ 132 (340)
..++.++||||+||++|||++|+.||............... ..............++
T Consensus 198 ~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 277 (350)
T d1q5ka_ 198 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPP 277 (350)
T ss_dssp SSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCH
T ss_pred cCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCH
Confidence 46899999999999999999999998764332211111100 0000001112234568
Q ss_pred HHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 133 ELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 133 ~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.+.+|+.+||+.||++|||+.|+++
T Consensus 278 ~~~dLl~~mL~~dP~~R~ta~e~L~ 302 (350)
T d1q5ka_ 278 EAIALCSRLLEYTPTARLTPLEACA 302 (350)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHccCChhHCcCHHHHhc
Confidence 8999999999999999999999985
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=99.97 E-value=6.3e-32 Score=235.08 Aligned_cols=156 Identities=19% Similarity=0.327 Sum_probs=119.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC----CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~ 76 (340)
|++.+...++.||+.||.|||+.+ ||||||||+|||++.++.+|++|||.+...... ....+++.|++||.+.+.
T Consensus 97 l~~~~~~~i~~qi~~~L~~LH~~~-IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~ 175 (286)
T d1ob3a_ 97 LESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGS 175 (286)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTC
T ss_pred cchhhhHHHHHHHHHHHHHhccCc-EEecCCCCceeeEcCCCCEEecccccceecccCccccceecccchhhhHHHHhCC
Confidence 577889999999999999999999 999999999999999999999999998765433 334678999999998764
Q ss_pred -CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccc-----------------------ccccCCCCCchhHH
Q 019495 77 -RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT-----------------------DSCLEGQFTDDDGT 132 (340)
Q Consensus 77 -~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~ 132 (340)
.++.++|||||||++|||++|+.||.+............... ............++
T Consensus 176 ~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 255 (286)
T d1ob3a_ 176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDE 255 (286)
T ss_dssp CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCH
T ss_pred CCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCH
Confidence 568999999999999999999999875432211111100000 00001112334567
Q ss_pred HHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 133 ELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 133 ~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.+.+++.+||+.||++|||++|+++
T Consensus 256 ~~~dli~~~L~~dP~~R~s~~ell~ 280 (286)
T d1ob3a_ 256 SGIDLLSKMLKLDPNQRITAKQALE 280 (286)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHccCChhHCcCHHHHhc
Confidence 8999999999999999999999974
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=5.3e-32 Score=238.76 Aligned_cols=154 Identities=18% Similarity=0.234 Sum_probs=124.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCC--CCeEEeccCCCccCCCCC---ccccCCcccCcccccC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED--GNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLRT 75 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~--~~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~ 75 (340)
|++.+...++.||+.||.|||+++ |+||||||+||+++.+ +.+|++|||+++...... +..+|+.|++||.+.+
T Consensus 99 l~e~~~~~i~~qi~~al~yLH~~~-iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~ 177 (321)
T d1tkia_ 99 LNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQH 177 (321)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcC-CCcccccccceeecCCCceEEEEcccchhhccccCCcccccccccccccchhccC
Confidence 578889999999999999999999 9999999999999854 479999999998765543 3467899999999998
Q ss_pred CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHH
Q 019495 76 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 155 (340)
Q Consensus 76 ~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i 155 (340)
..++.++||||+||++|+|++|..||................. .+.......++..+.+++.+||+.||++|||+.++
T Consensus 178 ~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~ei 255 (321)
T d1tkia_ 178 DVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEY--TFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEA 255 (321)
T ss_dssp CEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC--CCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred CCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCChhhccCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 8899999999999999999999999987655443332222111 01111112356789999999999999999999999
Q ss_pred HH
Q 019495 156 VT 157 (340)
Q Consensus 156 ~~ 157 (340)
++
T Consensus 256 l~ 257 (321)
T d1tkia_ 256 LQ 257 (321)
T ss_dssp HH
T ss_pred hc
Confidence 86
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=3.6e-31 Score=233.73 Aligned_cols=161 Identities=17% Similarity=0.207 Sum_probs=120.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC--------CccccCCcccCcccc
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--------KSYSTNLAFTPPEYL 73 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~--------~~~~~~~~y~aPE~~ 73 (340)
+......++.||+.||.|||+++ |+||||||+|||++.++.+|++|||+++..... .+..||+.|+|||++
T Consensus 115 ~~~~~~~i~~qil~~l~~lH~~~-ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~ 193 (318)
T d3blha1 115 TLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELL 193 (318)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHH
T ss_pred ccHHHHHHHHHHHHHHHHhccCC-EEecCcCchheeecCCCcEEeeecceeeecccccccccccccceecCHHHhhHHHH
Confidence 45677889999999999999999 999999999999999999999999998754422 234689999999998
Q ss_pred cCC-CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccc---cccc--------------CCCCCc-------
Q 019495 74 RTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT---DSCL--------------EGQFTD------- 128 (340)
Q Consensus 74 ~~~-~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~---~~~~--------------~~~~~~------- 128 (340)
.+. .++.++||||+||++|||++|+.||.+............... +... ......
T Consensus 194 ~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (318)
T d3blha1 194 LGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLK 273 (318)
T ss_dssp TTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHH
T ss_pred cCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhc
Confidence 764 689999999999999999999999865432222111111000 0000 000000
Q ss_pred --hhHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccccC
Q 019495 129 --DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 165 (340)
Q Consensus 129 --~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 165 (340)
..++.+.+||.+||+.||++|||++|++. ++++..
T Consensus 274 ~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~--Hpff~~ 310 (318)
T d3blha1 274 AYVRDPYALDLIDKLLVLDPAQRIDSDDALN--HDFFWS 310 (318)
T ss_dssp HHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH--SGGGSS
T ss_pred cccCCHHHHHHHHHHCcCChhHCcCHHHHHc--Chhhcc
Confidence 11356788999999999999999999985 555543
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.5e-31 Score=238.66 Aligned_cols=156 Identities=19% Similarity=0.313 Sum_probs=120.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-------CccccCCcccCcccc
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-------KSYSTNLAFTPPEYL 73 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~y~aPE~~ 73 (340)
|++.....++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++..... ....||+.|+|||++
T Consensus 106 l~~~~i~~i~~qil~al~yLH~~~-iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l 184 (345)
T d1pmea_ 106 LSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 184 (345)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCcceEEECCCCCEEEcccCceeeccCCCccceeeccccccceechHHHh
Confidence 578889999999999999999999 999999999999999999999999998764332 234678999999998
Q ss_pred cC-CCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccc------------------ccCC-------CCC
Q 019495 74 RT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS------------------CLEG-------QFT 127 (340)
Q Consensus 74 ~~-~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~-------~~~ 127 (340)
.. ..++.++||||+||++|+|++|+.||..................+ .... ...
T Consensus 185 ~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (345)
T d1pmea_ 185 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF 264 (345)
T ss_dssp TTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHC
T ss_pred hcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhC
Confidence 65 457889999999999999999999987643221111111100000 0000 011
Q ss_pred chhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 128 DDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 128 ~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
...++.+.+++.+||+.||++|||+.++++
T Consensus 265 ~~~s~~~~~li~~~L~~dP~~R~ta~e~L~ 294 (345)
T d1pmea_ 265 PNADSKALDLLDKMLTFNPHKRIEVEQALA 294 (345)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 234568999999999999999999999986
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.7e-31 Score=237.21 Aligned_cols=155 Identities=17% Similarity=0.254 Sum_probs=122.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-CccccCCcccCcccccCC-CC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTG-RV 78 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~-~~ 78 (340)
|++.....++.||+.||.|||+++ ||||||||+|||++.++.+|++|||+++..... ....+|+.|+|||++.+. .+
T Consensus 118 l~~~~~~~~~~qi~~aL~~LH~~~-IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 196 (346)
T d1cm8a_ 118 LGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRY 196 (346)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCC
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCC-CcccccCcchhhcccccccccccccceeccCCccccccccccccCHHHHcCCCCC
Confidence 578889999999999999999999 999999999999999999999999999876544 346789999999998764 57
Q ss_pred CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhh--------------------------ccccccccCCCCCchhHH
Q 019495 79 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--------------------------QMLTDSCLEGQFTDDDGT 132 (340)
Q Consensus 79 ~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~ 132 (340)
+.++||||+||++|+|++|+.||............. ........ .......++
T Consensus 197 ~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~ 275 (346)
T d1cm8a_ 197 TQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDF-ASILTNASP 275 (346)
T ss_dssp CTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCG-GGTCTTCCH
T ss_pred CccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccch-HHhccCCCH
Confidence 899999999999999999999986642211110000 00000000 112234567
Q ss_pred HHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 133 ELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 133 ~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
.+.+||.+||..||++|||+.+++.
T Consensus 276 ~~~dli~~mL~~dP~~R~ta~eiL~ 300 (346)
T d1cm8a_ 276 LAVNLLEKMLVLDAEQRVTAGEALA 300 (346)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHHCcCChhHCcCHHHHhc
Confidence 8999999999999999999999987
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=9.6e-31 Score=230.74 Aligned_cols=153 Identities=20% Similarity=0.275 Sum_probs=119.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-----CccccCCcccCcccccCC
Q 019495 2 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~ 76 (340)
+......++.||+.||.|+|+++ |+||||||+||+++.+|.+||+|||+++..... .+..+++.|++||.+.+.
T Consensus 127 ~e~~~~~~~~Qi~~al~~lH~~~-ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~ 205 (322)
T d1vzoa_ 127 TEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGG 205 (322)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTC
T ss_pred cHHHHHHHHHHHHHHHHHhhcCC-EEeccCCccceeecCCCCEEEeeccchhhhcccccccccccccccccchhHHhhcC
Confidence 45677889999999999999999 999999999999999999999999998764322 245689999999999764
Q ss_pred --CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccccccccCCCCCchhHHHHHHHHHHhhccCCCCCCC---
Q 019495 77 --RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN--- 151 (340)
Q Consensus 77 --~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps--- 151 (340)
.++.++|||||||++|+|++|+.||................. .....++..+++.+.+++.+||+.||++|||
T Consensus 206 ~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~ 283 (322)
T d1vzoa_ 206 DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL--KSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGP 283 (322)
T ss_dssp C---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH--HCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSST
T ss_pred CcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcc--cCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCc
Confidence 468899999999999999999999865432221111111111 1122345667899999999999999999995
Q ss_pred --HHHHHH
Q 019495 152 --PKSLVT 157 (340)
Q Consensus 152 --~~~i~~ 157 (340)
++|+++
T Consensus 284 ~t~~eil~ 291 (322)
T d1vzoa_ 284 RDADEIKE 291 (322)
T ss_dssp TTHHHHHT
T ss_pred ccHHHHHc
Confidence 677764
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=99.96 E-value=2.7e-30 Score=229.09 Aligned_cols=156 Identities=17% Similarity=0.216 Sum_probs=118.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCC-CeEEeccCCCccCCCC---CccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~-~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~ 76 (340)
|++.....++.||+.||.|||+++ |+||||||+|||++.++ .+|++|||+++..... ....+|+.|+|||.+.+.
T Consensus 126 l~e~~i~~i~~qil~aL~~LH~~g-IvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~ 204 (328)
T d3bqca1 126 LTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 204 (328)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcc-cccccccccceEEcCCCCeeeecccccceeccCCCcccccccCccccCcccccCC
Confidence 467788899999999999999999 99999999999998665 5899999999866543 345679999999998765
Q ss_pred -CCCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhh------------------h------hcccc--------ccccC
Q 019495 77 -RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR------------------N------LQMLT--------DSCLE 123 (340)
Q Consensus 77 -~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~------------------~------~~~~~--------~~~~~ 123 (340)
.++.++||||+||+++++++|+.||........... . ..... .....
T Consensus 205 ~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (328)
T d3bqca1 205 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 284 (328)
T ss_dssp CCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCC
T ss_pred CCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhccc
Confidence 479999999999999999999998864321100000 0 00000 00011
Q ss_pred CCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 124 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 124 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
......+++++.+||.+||+.||++|||++|+++
T Consensus 285 ~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~ 318 (328)
T d3bqca1 285 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 318 (328)
T ss_dssp TTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1122335678999999999999999999999985
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=8.6e-30 Score=222.14 Aligned_cols=156 Identities=17% Similarity=0.243 Sum_probs=118.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCC----ccccCCcccCcccccCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFTPPEYLRTG 76 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~ 76 (340)
+++.....++.|++.||+|||+++ |+||||||+|||++.++.+|++|||.++...... ...+++.|++||++.+.
T Consensus 98 ~~~~~~~~~~~q~~~aL~~lH~~~-IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~ 176 (292)
T d1unla_ 98 LDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 176 (292)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTC
T ss_pred cchhHHHHHHHHHHHHHHHhhcCC-EeeecccCcccccccCCceeeeecchhhcccCCCccceeeccccchhhhhHhccC
Confidence 467788899999999999999999 9999999999999999999999999998765432 23467889999998765
Q ss_pred C-CCCCcceehHHHHHHHHhhCCCCCCcchh-HHHhhhhhc--------------ccc---------ccccCCCCCchhH
Q 019495 77 R-VTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQ--------------MLT---------DSCLEGQFTDDDG 131 (340)
Q Consensus 77 ~-~~~~~Di~s~G~il~el~~g~~~~~~~~~-~~~~~~~~~--------------~~~---------~~~~~~~~~~~~~ 131 (340)
. ++.++||||+||++|||++|+.||..... ......... ... ............+
T Consensus 177 ~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 256 (292)
T d1unla_ 177 KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLN 256 (292)
T ss_dssp SCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCC
T ss_pred CCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCC
Confidence 4 68999999999999999999988643211 110000000 000 0001112234456
Q ss_pred HHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 132 TELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 132 ~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+.+.+|+.+||+.||.+|||++|++.
T Consensus 257 ~~~~dll~~mL~~dP~~R~sa~e~L~ 282 (292)
T d1unla_ 257 ATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 78999999999999999999999975
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=7.5e-30 Score=228.42 Aligned_cols=156 Identities=15% Similarity=0.235 Sum_probs=115.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC---CccccCCcccCcccccCCC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR 77 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 77 (340)
+++.....++.||+.||.|||++| |+||||||+|||++.++.+|++|||+++..... ....+|+.|+|||++.+..
T Consensus 116 ~~~~~i~~~~~qil~gl~~LH~~g-iiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~ 194 (355)
T d2b1pa1 116 LDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 194 (355)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC---------------CCTTCCHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHhhhcc-cccccCCccccccccccceeeechhhhhccccccccccccccccccChhhhcCCC
Confidence 467888899999999999999999 999999999999999999999999988765443 3446899999999999888
Q ss_pred CCCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhccc---------------------------------cccc-cC
Q 019495 78 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML---------------------------------TDSC-LE 123 (340)
Q Consensus 78 ~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~-~~ 123 (340)
++.++||||+||++++|++|+.||.+.............. .... ..
T Consensus 195 ~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (355)
T d2b1pa1 195 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFP 274 (355)
T ss_dssp CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSC
T ss_pred CCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCcccccccccccccccccc
Confidence 9999999999999999999999986543221111110000 0000 00
Q ss_pred C--CCCchhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 019495 124 G--QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 124 ~--~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
. ......++.+.+|+.+||..||++|||++|+++
T Consensus 275 ~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~ 310 (355)
T d2b1pa1 275 ADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 310 (355)
T ss_dssp CSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0 011224678999999999999999999999985
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.1e-29 Score=226.98 Aligned_cols=156 Identities=17% Similarity=0.260 Sum_probs=117.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCC-CccccCCcccCcccccCC-CC
Q 019495 1 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTG-RV 78 (340)
Q Consensus 1 l~~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~-~~ 78 (340)
|++.+...++.||+.||.|||++| |+||||||+|||++.+|.+|++|||++...... .+..|++.|+|||++.+. .+
T Consensus 118 l~e~~~~~i~~qil~aL~~LH~~g-iiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~~~~~~g~~~y~apE~~~~~~~~ 196 (348)
T d2gfsa1 118 LTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHY 196 (348)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCC----CCTGGGSSSCHHHHTSCHHHHTTCSCC
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCC-CcccccCCccccccccccccccccchhcccCcccccccccccccCchhhcCCccC
Confidence 577888999999999999999999 999999999999999999999999998765433 355688999999987764 46
Q ss_pred CCCcceehHHHHHHHHhhCCCCCCcchhHHHhhhhhcccccc------------------cc--CCC-----CCchhHHH
Q 019495 79 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS------------------CL--EGQ-----FTDDDGTE 133 (340)
Q Consensus 79 ~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~------------------~~--~~~-----~~~~~~~~ 133 (340)
+.++||||+||++|+|++|+.||.+................. .. ... .....++.
T Consensus 197 ~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 276 (348)
T d2gfsa1 197 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 276 (348)
T ss_dssp CTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHH
T ss_pred CcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHH
Confidence 889999999999999999999987643222111111100000 00 000 01234578
Q ss_pred HHHHHHHhhccCCCCCCCHHHHHH
Q 019495 134 LVRLASRCLQYEPRERPNPKSLVT 157 (340)
Q Consensus 134 l~~li~~cl~~~p~~Rps~~~i~~ 157 (340)
+.+||.+||..||.+|||+.|+++
T Consensus 277 ~~dli~~mL~~dP~~R~ta~elL~ 300 (348)
T d2gfsa1 277 AVDLLEKMLVLDSDKRITAAQALA 300 (348)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHCcCChhhCcCHHHHhc
Confidence 999999999999999999999986
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=1.8e-28 Score=220.27 Aligned_cols=160 Identities=18% Similarity=0.267 Sum_probs=119.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHh-CCCccccCCCCCCEEecCCCC------eEEeccCCCccCCCC-CccccCCcccCcccc
Q 019495 2 KWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGN------PRLSTFGLMKNSRDG-KSYSTNLAFTPPEYL 73 (340)
Q Consensus 2 ~~~~~~~i~~qi~~~l~ylH~-~~~iiH~dlk~~nill~~~~~------~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~ 73 (340)
++.....++.||+.||.|||+ .+ |+||||||+|||++.++. ++++|||.+...... ....+|+.|+|||++
T Consensus 123 ~~~~i~~i~~qil~al~~lh~~~~-IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~ 201 (362)
T d1q8ya_ 123 PLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVL 201 (362)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHhhhcC-cccccCChhHeeeeccCcccccceeeEeecccccccccccccccccccccChhhc
Confidence 456778899999999999998 77 999999999999986553 899999998765433 456789999999999
Q ss_pred cCCCCCCCcceehHHHHHHHHhhCCCCCCcchhHHHh----------------------hhh-hccccc------c----
Q 019495 74 RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR----------------------DRN-LQMLTD------S---- 120 (340)
Q Consensus 74 ~~~~~~~~~Di~s~G~il~el~~g~~~~~~~~~~~~~----------------------~~~-~~~~~~------~---- 120 (340)
.+..++.++|+||+||++++|++|+.||......... ... .....+ .
T Consensus 202 ~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (362)
T d1q8ya_ 202 LGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKL 281 (362)
T ss_dssp HTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCC
T ss_pred cccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccc
Confidence 9888999999999999999999999988543110000 000 000000 0
Q ss_pred ---------ccCCCCCchhHHHHHHHHHHhhccCCCCCCCHHHHHHHhccccc
Q 019495 121 ---------CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 164 (340)
Q Consensus 121 ---------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~ 164 (340)
......+...++.+.+|+.+||..||.+|||++|+++ +++.+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~--Hp~f~ 332 (362)
T d1q8ya_ 282 KFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN--HPWLK 332 (362)
T ss_dssp CBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT--CGGGT
T ss_pred cCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhc--CcccC
Confidence 0012234456789999999999999999999999986 44443
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=2.1e-21 Score=144.82 Aligned_cols=107 Identities=26% Similarity=0.368 Sum_probs=102.8
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 309 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 309 (340)
.+..++.+|+.++..|+|++|+..|+++|+.+|+ ++.+|.++|.+|.++|++++|+.+++++++++|+++.+|+++|.+
T Consensus 2 ~~~~l~~~g~~~~~~g~~~eAi~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 80 (117)
T d1elwa_ 2 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 80 (117)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chhhhhcccccccccccccccchhhhhHHHhccchhhHHHHHHHH
Confidence 3567889999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHhhhcccccccccc
Q 019495 310 LSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 310 ~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
+..+|++++|+.+|+++++++|+++.++
T Consensus 81 ~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 108 (117)
T d1elwa_ 81 LEFLNRFEEAKRTYEEGLKHEANNPQLK 108 (117)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999999988765
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.82 E-value=3.1e-20 Score=151.46 Aligned_cols=106 Identities=23% Similarity=0.354 Sum_probs=102.0
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
+..+.++|+.+++.|+|++|+..|++||+++|+ ++.+|.++|.||..+|++++|+.+|++|++++|+++.+|+++|.+|
T Consensus 4 a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~-~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~~~lg~~~ 82 (201)
T d2c2la1 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 82 (201)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 567899999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHhhhcccccccccc
Q 019495 311 SAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
..+|+|++|+.+|++|++++|++...+
T Consensus 83 ~~l~~~~~A~~~~~~al~l~p~~~~~~ 109 (201)
T d2c2la1 83 LEMESYDEAIANLQRAYSLAKEQRLNF 109 (201)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHCCCHHHHHHHHHHHHHhCcccHHHH
Confidence 999999999999999999999877654
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=4.9e-20 Score=145.03 Aligned_cols=109 Identities=24% Similarity=0.311 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHH
Q 019495 227 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 306 (340)
Q Consensus 227 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 306 (340)
.++.+..+..+|+.+++.|+|++|+..|+++|+++|+ +..+|.++|.||+.+|++++|+.+|+++++++|++..+|+++
T Consensus 6 ~l~~a~~l~~~gn~~~~~~~y~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~~~~a~~~~ 84 (159)
T d1a17a_ 6 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRR 84 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHhhhccccchh-hhhhhhhhHHHHHhccccchHHHHHHHHHHHcccchHHHHHH
Confidence 4567888999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHhhhccccccccc
Q 019495 307 AAALSAMGMENEAQVALKEGTTLEAKKNST 336 (340)
Q Consensus 307 g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 336 (340)
|.++..+|+|++|+.+|+++++++|++..+
T Consensus 85 g~~~~~~g~~~eA~~~~~~a~~~~p~~~~~ 114 (159)
T d1a17a_ 85 AASNMALGKFRAALRDYETVVKVKPHDKDA 114 (159)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCCHHH
Confidence 999999999999999999999999998764
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.80 E-value=2.6e-19 Score=139.86 Aligned_cols=113 Identities=19% Similarity=0.231 Sum_probs=103.7
Q ss_pred hhHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcc---------------hHHhhhhHHHHHhcCChHHHHHHH
Q 019495 225 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---------------PTVYARRSLCYLMSDMPQDALNDA 289 (340)
Q Consensus 225 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~ 289 (340)
.+++..+..+...|+.+|..|+|++|+..|++||+..+... ..+|.++|.||.++|++.+|++++
T Consensus 11 ~e~~~~a~~~~~~G~~~f~~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Al~~~ 90 (153)
T d2fbna1 11 EEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHA 90 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcchhhhhhHHHHHhhhhHHHHHHhhHHHHHHHhcccchhhhhh
Confidence 36778889999999999999999999999999998766421 247889999999999999999999
Q ss_pred HHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 290 MQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 290 ~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
++||+++|+++++|+++|.+|..+|+|++|+.+|+++++++|++.+++
T Consensus 91 ~~al~~~p~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~ 138 (153)
T d2fbna1 91 SKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIR 138 (153)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred hccccccchhhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999999999999999999999988664
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=7.3e-19 Score=139.75 Aligned_cols=114 Identities=14% Similarity=0.121 Sum_probs=104.6
Q ss_pred hhhHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcc--------------hHHhhhhHHHHHhcCChHHHHHHH
Q 019495 224 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS--------------PTVYARRSLCYLMSDMPQDALNDA 289 (340)
Q Consensus 224 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~--------------~~~~~~~~~~~~~~~~~~~A~~~~ 289 (340)
..+++..+..+.+.|+.+|..|+|++|+..|+++|+..|... ..+|.++|.||+++|+|++|+.++
T Consensus 6 ~~ek~~~a~~l~~~G~~~~~~~~~~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~y~k~~~~~~A~~~~ 85 (170)
T d1p5qa1 6 SEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESC 85 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhccccchHHHhhhchhHHHHHHHHHHHHHhhhhcccccchh
Confidence 347788899999999999999999999999999999877621 256788999999999999999999
Q ss_pred HHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 290 MQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 290 ~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..+.
T Consensus 86 ~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~~ 133 (170)
T d1p5qa1 86 NKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAK 133 (170)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHH
T ss_pred hhhhhccccchhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999999999999999999999987653
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.76 E-value=2e-18 Score=136.95 Aligned_cols=113 Identities=15% Similarity=0.175 Sum_probs=103.1
Q ss_pred hhHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCc--------------chHHhhhhHHHHHhcCChHHHHHHHH
Q 019495 225 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--------------SPTVYARRSLCYLMSDMPQDALNDAM 290 (340)
Q Consensus 225 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--------------~~~~~~~~~~~~~~~~~~~~A~~~~~ 290 (340)
.+++..+..+.+.|+.+|+.|+|++|+..|++||...+.. ...+|.++|.||.++|++.+|+.+++
T Consensus 9 ~E~~~~a~~~~e~G~~~~~~~~~~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Ai~~~~ 88 (168)
T d1kt1a1 9 KEKLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCD 88 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhccchhhhhhcchhHHHHHHhHHHHHHHhhhcccchhhhh
Confidence 4677888999999999999999999999999999765441 12567889999999999999999999
Q ss_pred HHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 291 QAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 291 ~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
++++++|++..+|+++|.+|..+|+|++|+.+|+++++++|++..++
T Consensus 89 ~al~l~p~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~~ 135 (168)
T d1kt1a1 89 KALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAAR 135 (168)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHH
T ss_pred hhhhcccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999999999999999999999987654
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.73 E-value=5.4e-18 Score=134.54 Aligned_cols=111 Identities=18% Similarity=0.226 Sum_probs=99.9
Q ss_pred hHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhc----------------CCCcchHHhhhhHHHHHhcCChHHHHHHH
Q 019495 226 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA----------------GTMVSPTVYARRSLCYLMSDMPQDALNDA 289 (340)
Q Consensus 226 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~----------------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~ 289 (340)
..+..+..+...|+.++..|+|++|++.|+++|+. +|. ...++.++|.||.++|++++|+.+|
T Consensus 22 ~~~~~a~~~~~~~~~~~~~~~y~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~Ai~~~ 100 (169)
T d1ihga1 22 KILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVDSC 100 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhhhhHHHHHhChh-hHHHHHHHHHHHHhhcccchhhhhh
Confidence 34455667788999999999999999999999854 344 5678889999999999999999999
Q ss_pred HHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 290 MQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 290 ~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..+.
T Consensus 101 ~~al~~~p~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~ 148 (169)
T d1ihga1 101 LEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQ 148 (169)
T ss_dssp HHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hhhhhhhhhhhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999999999999999999999987654
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=2.1e-17 Score=124.77 Aligned_cols=104 Identities=13% Similarity=0.085 Sum_probs=96.1
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCch-------H
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH-------I 301 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~-------~ 301 (340)
+.+..+.+.|+.++..|+|++|+++|+++|+++|+ +..++.++|.||..+|+|++|+.++++|++++|++. .
T Consensus 2 ~~a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~~~a~ 80 (128)
T d1elra_ 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (128)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 45778899999999999999999999999999999 899999999999999999999999999999998875 4
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHhhhcccccc
Q 019495 302 ASYLQAAALSAMGMENEAQVALKEGTTLEAKK 333 (340)
Q Consensus 302 a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 333 (340)
+|+++|.++..++++++|+.+|++++..++..
T Consensus 81 ~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~~ 112 (128)
T d1elra_ 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHRTP 112 (128)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCH
Confidence 67788889999999999999999999887753
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.68 E-value=5.8e-17 Score=119.25 Aligned_cols=97 Identities=12% Similarity=0.053 Sum_probs=92.5
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 309 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 309 (340)
.....+..|..+++.|++++|+..|+++++.+|+ ++.+|..+|.++...|++++|+.+++++++++|++..+|+.+|.+
T Consensus 15 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~la~~ 93 (112)
T d1hxia_ 15 YHENPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVS 93 (112)
T ss_dssp GCSCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhhHHHHHHHhhhcccccc-cchhhhhhhhhhhhhhhHHHhhcccccccccccccccchHHHHHH
Confidence 3445678899999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHhhh
Q 019495 310 LSAMGMENEAQVALKEGT 327 (340)
Q Consensus 310 ~~~~~~~~~A~~~~~~al 327 (340)
|..+|++++|+++|++.|
T Consensus 94 y~~~g~~~~A~~~l~~~l 111 (112)
T d1hxia_ 94 HTNEHNANAALASLRAWL 111 (112)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHh
Confidence 999999999999999976
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=4.5e-17 Score=121.44 Aligned_cols=102 Identities=10% Similarity=-0.022 Sum_probs=92.6
Q ss_pred HHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcC---ChHHHHHHHHHHhhhCCCc--hHHHHHHHHH
Q 019495 235 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD---MPQDALNDAMQAQIISPIW--HIASYLQAAA 309 (340)
Q Consensus 235 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~al~~~p~~--~~a~~~~g~~ 309 (340)
...++.++..+++++|.+.|+++|+++|+ ++.+++++|.|+++.+ ++++|++.++++++.+|+. ..++|++|.+
T Consensus 3 ~~l~n~~~~~~~l~~Ae~~Y~~aL~~~p~-~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~ 81 (122)
T d1nzna_ 3 EAVLNELVSVEDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVG 81 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Confidence 35677889999999999999999999999 8999999999998744 5667999999999998765 5689999999
Q ss_pred HHHcCChHHHHHHHHhhhcccccccccc
Q 019495 310 LSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 310 ~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
|..+|+|++|+++|+++|+++|++..|.
T Consensus 82 y~~~g~~~~A~~~~~~aL~~~P~~~~A~ 109 (122)
T d1nzna_ 82 NYRLKEYEKALKYVRGLLQTEPQNNQAK 109 (122)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHhhhHHHHHHHHHHHHhCcCCHHHH
Confidence 9999999999999999999999998764
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.67 E-value=2.8e-16 Score=132.62 Aligned_cols=107 Identities=13% Similarity=-0.011 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHH
Q 019495 228 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 307 (340)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 307 (340)
...+..++..|..++..|+|++|++.|+++|+++|+ ++.+|+++|.+|..+|++++|++.|+++++++|+++.+++++|
T Consensus 34 ~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg 112 (259)
T d1xnfa_ 34 DERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRG 112 (259)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCC-CHHHHhhhchHHHHHHHHHHhhhhhhHHHHHHhhhhhhHHHHH
Confidence 456778899999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHhhhcccccccc
Q 019495 308 AALSAMGMENEAQVALKEGTTLEAKKNS 335 (340)
Q Consensus 308 ~~~~~~~~~~~A~~~~~~al~l~p~~~~ 335 (340)
.+|..+|++++|+..|+++++++|++..
T Consensus 113 ~~~~~~g~~~~A~~~~~~al~~~p~~~~ 140 (259)
T d1xnfa_ 113 IALYYGGRDKLAQDDLLAFYQDDPNDPF 140 (259)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHhhHHHHHHHHHHHHhhccccHH
Confidence 9999999999999999999999998654
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=8.2e-16 Score=124.29 Aligned_cols=102 Identities=14% Similarity=0.082 Sum_probs=93.0
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
.++..+.++|..++..|+|++|++.|+++ .+. ++.+++++|.+|..+|++++|+++|++|++++|+++.+|+++|.
T Consensus 3 ~~~~~l~~~g~~~~~~~d~~~Al~~~~~i---~~~-~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~~~~a~~~~g~ 78 (192)
T d1hh8a_ 3 VEAISLWNEGVLAADKKDWKGALDAFSAV---QDP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGM 78 (192)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTS---SSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHhc---CCC-CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 35667788999999999999999999874 444 56788999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHhhhccccccc
Q 019495 309 ALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 309 ~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
+|..+|+|++|+..|++|++..+.+.
T Consensus 79 ~~~~~g~~~~A~~~~~kAl~~~~~n~ 104 (192)
T d1hh8a_ 79 LYYQTEKYDLAIKDLKEALIQLRGNQ 104 (192)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred HHHhhccHHHHHHHHHHHHHhCccCc
Confidence 99999999999999999999877654
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.62 E-value=6.1e-16 Score=120.78 Aligned_cols=111 Identities=14% Similarity=0.117 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcc-----------hHHhhhhHHHHHhcCChHHHHHHHHHHhhh
Q 019495 227 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS-----------PTVYARRSLCYLMSDMPQDALNDAMQAQII 295 (340)
Q Consensus 227 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-----------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 295 (340)
+...+..++..|+.++..|+|++|++.|+++|++.|+.. ..+|.++|.+|..+|++++|++++++++++
T Consensus 5 ~~a~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~ 84 (156)
T d2hr2a1 5 EVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHY 84 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhc
Confidence 345566777889999999999999999999999888631 357889999999999999999999999988
Q ss_pred CCC-----------chHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 296 SPI-----------WHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 296 ~p~-----------~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
.|. ...+|+++|.+|..+|++++|+++|++|+++.|+.....
T Consensus 85 ~~~~~~~~~~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~Al~l~~~~~~~~ 137 (156)
T d2hr2a1 85 FNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGET 137 (156)
T ss_dssp HHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCC
T ss_pred ccccccccccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHhhchH
Confidence 543 356899999999999999999999999999999876543
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.59 E-value=3.2e-16 Score=120.71 Aligned_cols=99 Identities=12% Similarity=0.046 Sum_probs=88.6
Q ss_pred hHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhc----------CChHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 239 DVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS----------DMPQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 239 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~----------~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
..+-+.+.|++|+..|+++++++|+ ++.++.++|.++... +.+++|++.|++|++++|+++.+|+++|.
T Consensus 5 ~~~~r~~~fe~A~~~~e~al~~~P~-~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~~~~a~~~lG~ 83 (145)
T d1zu2a1 5 TEFDRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGN 83 (145)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHccHHHHHHHHHHHHhhCCc-chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcchhhHHHhhHHH
Confidence 3455678899999999999999999 899999999999854 45688999999999999999999999999
Q ss_pred HHHHcCC-----------hHHHHHHHHhhhccccccccccC
Q 019495 309 ALSAMGM-----------ENEAQVALKEGTTLEAKKNSTAG 338 (340)
Q Consensus 309 ~~~~~~~-----------~~~A~~~~~~al~l~p~~~~~~~ 338 (340)
+|..+|+ |++|+++|++|++++|++..+++
T Consensus 84 ~y~~~g~~~~~~~~~~~~~~~A~~~~~kal~l~P~~~~~~~ 124 (145)
T d1zu2a1 84 AYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLK 124 (145)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHcccchhhHHHHHHhHHHhhhhhhcccccCCCHHHHHH
Confidence 9998764 79999999999999999887653
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.57 E-value=1.5e-14 Score=116.70 Aligned_cols=102 Identities=17% Similarity=0.103 Sum_probs=94.4
Q ss_pred HHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCc------------
Q 019495 232 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW------------ 299 (340)
Q Consensus 232 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------------ 299 (340)
..+++.|..++..|+|++|++.|++||+++|+ .+.+|.++|.+|.++|++++|+++|++|++..+.+
T Consensus 37 ~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~-~~~a~~~~g~~~~~~g~~~~A~~~~~kAl~~~~~n~~~~~~~~~~~~ 115 (192)
T d1hh8a_ 37 RICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQF 115 (192)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCC
T ss_pred HHHHHHHHHHHHcCCchhHHHHHHHHHHHhhh-hhhhHHHHHHHHHhhccHHHHHHHHHHHHHhCccCchHHHHHhhhhc
Confidence 45789999999999999999999999999999 89999999999999999999999999999875542
Q ss_pred ----hHHHHHHHHHHHHcCChHHHHHHHHhhhccccccc
Q 019495 300 ----HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 300 ----~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 334 (340)
.+.++++|.++..+|++++|++.|++|++++|+..
T Consensus 116 ~~~~~e~~~n~a~~~~~~~~~~~A~~~l~~A~~~~~~~~ 154 (192)
T d1hh8a_ 116 KLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 154 (192)
T ss_dssp EEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred ccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcc
Confidence 47899999999999999999999999999998853
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=8.3e-15 Score=127.48 Aligned_cols=106 Identities=12% Similarity=0.146 Sum_probs=97.8
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
+..+...|..+...|++++|+..|+++++.+|+ ++.+|.++|.+|...|++++|++.|+++++++|+++.+|+++|.+|
T Consensus 172 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~ 250 (323)
T d1fcha_ 172 PDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISC 250 (323)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cccchhhHHHHHHHHHHhhhhcccccccccccc-cccchhhhhhcccccccchhHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 345677899999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHhhhcccccccccc
Q 019495 311 SAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
..+|++++|+..|++|++++|++..++
T Consensus 251 ~~~g~~~~A~~~~~~al~l~p~~~~~~ 277 (323)
T d1fcha_ 251 INLGAHREAVEHFLEALNMQRKSRGPR 277 (323)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHTC----
T ss_pred HHCCCHHHHHHHHHHHHHhCCcChhhh
Confidence 999999999999999999999987654
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=1.1e-14 Score=126.92 Aligned_cols=109 Identities=10% Similarity=-0.011 Sum_probs=101.1
Q ss_pred HHHHHHHHHHHhHHhhhc-CHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHH
Q 019495 228 MQETLNSKKKGDVAFRQK-DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 306 (340)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 306 (340)
..+...+..+|..+...| ++++|+..|+++|+.+|+ +..+|.++|.++..+|++++|++.++++++++|++..+|+++
T Consensus 74 P~~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~-~~~a~~~~~~~~~~l~~~~eAl~~~~kal~~dp~n~~a~~~~ 152 (315)
T d2h6fa1 74 AANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHR 152 (315)
T ss_dssp TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHh-hhhHHHHHhHHHHhhccHHHHHHHHhhhhhhhhcchHHHHHH
Confidence 355568889999988876 599999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 307 AAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 307 g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
|.++..+|++++|+.+|++++++||.+..||
T Consensus 153 ~~~~~~~~~~~~Al~~~~~al~~~p~n~~a~ 183 (315)
T d2h6fa1 153 QWVIQEFKLWDNELQYVDQLLKEDVRNNSVW 183 (315)
T ss_dssp HHHHHHHTCCTTHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHCCccHHHH
Confidence 9999999999999999999999999988775
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=1.3e-14 Score=126.36 Aligned_cols=105 Identities=10% Similarity=-0.058 Sum_probs=97.2
Q ss_pred HHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCC-hHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 232 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM-PQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 232 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
+.+...|..+.+.+.+++|++.|++||+++|+ +..+|+++|.++..+|+ +++|++.++++++++|++..+|+.+|.++
T Consensus 44 ~a~~~~~~~~~~~e~~~~Al~~~~~ai~lnP~-~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~~~~a~~~~~~~~ 122 (315)
T d2h6fa1 44 DVYDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLV 122 (315)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHHHHCCC-ChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhhhHHHHHhHHH
Confidence 34445577788899999999999999999999 89999999999998875 89999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHhhhcccccccccc
Q 019495 311 SAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
..+|++++|++.|+++++++|++..+|
T Consensus 123 ~~l~~~~eAl~~~~kal~~dp~n~~a~ 149 (315)
T d2h6fa1 123 EWLRDPSQELEFIADILNQDAKNYHAW 149 (315)
T ss_dssp HHHTCCTTHHHHHHHHHHHCTTCHHHH
T ss_pred HhhccHHHHHHHHhhhhhhhhcchHHH
Confidence 999999999999999999999998765
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=1e-13 Score=120.42 Aligned_cols=107 Identities=9% Similarity=0.062 Sum_probs=100.2
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHH
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 309 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 309 (340)
+....+++|..++..|+|++|+..|+++|+.+|+ +..+|..+|.+|...|++++|+..++++++++|++..+|+.+|.+
T Consensus 18 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~ 96 (323)
T d1fcha_ 18 DHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVS 96 (323)
T ss_dssp TCSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccccccccc
Confidence 3344578999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHhhhcccccccccc
Q 019495 310 LSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 310 ~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
|..+|++++|++.++++++++|......
T Consensus 97 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 124 (323)
T d1fcha_ 97 FTNESLQRQACEILRDWLRYTPAYAHLV 124 (323)
T ss_dssp HHHTTCHHHHHHHHHHHHHTSTTTGGGC
T ss_pred ccccccccccccchhhHHHhccchHHHH
Confidence 9999999999999999999999876543
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=9.5e-14 Score=122.43 Aligned_cols=106 Identities=13% Similarity=0.062 Sum_probs=99.2
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
...+...|..+...|++++|++.|+.++...|. ....+..++.++...|++++|++.++++++++|+++.+++.+|.+|
T Consensus 271 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 349 (388)
T d1w3ba_ 271 PDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVL 349 (388)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHhhhccCCc-cchhhhHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 446777889999999999999999999999999 8888999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHhhhcccccccccc
Q 019495 311 SAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 311 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
..+|++++|+++|++|++++|++..++
T Consensus 350 ~~~g~~~~A~~~~~~al~l~P~~~~a~ 376 (388)
T d1w3ba_ 350 QQQGKLQEALMHYKEAIRISPTFADAY 376 (388)
T ss_dssp HTTTCCHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999987765
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=1.5e-13 Score=121.08 Aligned_cols=101 Identities=12% Similarity=-0.006 Sum_probs=96.2
Q ss_pred HHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHc
Q 019495 234 SKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAM 313 (340)
Q Consensus 234 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~ 313 (340)
+++.|+.+++.|+|++|++.|+++++.+|+ +..++..+|.+|...|++++|+..++++++++|+++.+|+.+|.+|..+
T Consensus 2 ll~la~~~~~~G~~~~A~~~~~~~l~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~~~~ 80 (388)
T d1w3ba_ 2 PMELAHREYQAGDFEAAERHCMQLWRQEPD-NTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKER 80 (388)
T ss_dssp CCTHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHhhhh
Confidence 457899999999999999999999999999 8899999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHhhhcccccccc
Q 019495 314 GMENEAQVALKEGTTLEAKKNS 335 (340)
Q Consensus 314 ~~~~~A~~~~~~al~l~p~~~~ 335 (340)
|++++|+..+.++++.+|....
T Consensus 81 g~~~~A~~~~~~~~~~~~~~~~ 102 (388)
T d1w3ba_ 81 GQLQEAIEHYRHALRLKPDFID 102 (388)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHH
T ss_pred cccccccccccccccccccccc
Confidence 9999999999999999987643
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=3.6e-13 Score=95.32 Aligned_cols=84 Identities=15% Similarity=-0.026 Sum_probs=74.7
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCc------chHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV------SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 304 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 304 (340)
+++.++.|..+++.|+|.+|+..|++|+++.|.. ...++.++|.+|.++|++++|++.++++|+++|++..+++
T Consensus 5 addc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~~ 84 (95)
T d1tjca_ 5 AEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (95)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHHH
Confidence 4678899999999999999999999999886652 2567889999999999999999999999999999999999
Q ss_pred HHHHHHHHcC
Q 019495 305 LQAAALSAMG 314 (340)
Q Consensus 305 ~~g~~~~~~~ 314 (340)
+++.+...++
T Consensus 85 Nl~~~~~~l~ 94 (95)
T d1tjca_ 85 NLKYFEYIMA 94 (95)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhC
Confidence 9988766553
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.37 E-value=4.6e-14 Score=113.70 Aligned_cols=82 Identities=16% Similarity=0.134 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCEEecCCCCeEEeccCCCccCCCCCccccCCcccC------cccccCC
Q 019495 3 WAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP------PEYLRTG 76 (340)
Q Consensus 3 ~~~~~~i~~qi~~~l~ylH~~~~iiH~dlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~a------PE~~~~~ 76 (340)
......++.|++.+|.|||+++ |+||||||+|||+++++ ++++|||+++........ .|.. .+.+ ..
T Consensus 102 ~~~~~~i~~ql~~~l~~lH~~g-iiHrDiKP~NILv~~~~-~~liDFG~a~~~~~~~~~----~~l~rd~~~~~~~f-~r 174 (191)
T d1zara2 102 VENPDEVLDMILEEVAKFYHRG-IVHGDLSQYNVLVSEEG-IWIIDFPQSVEVGEEGWR----EILERDVRNIITYF-SR 174 (191)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEETTE-EEECCCTTCEETTSTTHH----HHHHHHHHHHHHHH-HH
T ss_pred hHHHHHHHHHHHHHHHHHhhCC-EEEccCChhheeeeCCC-EEEEECCCcccCCCCCcH----HHHHHHHHHHHHHH-cC
Confidence 3445678999999999999999 99999999999999765 889999998765433211 1111 1222 25
Q ss_pred CCCCCcceehHHHHH
Q 019495 77 RVTPESVIYSFGTLL 91 (340)
Q Consensus 77 ~~~~~~Di~s~G~il 91 (340)
.++.++|+||..--+
T Consensus 175 ~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 175 TYRTEKDINSAIDRI 189 (191)
T ss_dssp HHCCCCCHHHHHHHH
T ss_pred CCCCcccHHHHHHHH
Confidence 678889999965433
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.35 E-value=6.8e-13 Score=111.32 Aligned_cols=95 Identities=17% Similarity=0.076 Sum_probs=84.9
Q ss_pred hhcCHHHHHHHHHHHHhcCCC---cchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHH
Q 019495 243 RQKDLKDAIECYTQFIDAGTM---VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEA 319 (340)
Q Consensus 243 ~~~~~~~A~~~~~~al~~~p~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A 319 (340)
...+++.|+..+++++...+. ....+++++|.+|...|++++|++.|++||+++|+++.+|+++|.+|..+|++++|
T Consensus 11 ~~~~~e~al~~~~e~l~~~~~~~~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~~A 90 (259)
T d1xnfa_ 11 PTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAA 90 (259)
T ss_dssp CCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHH
T ss_pred ccHHHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCCCHHHHhhhchHHHHHHHHHHh
Confidence 445678888999999876432 15578889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcccccccccc
Q 019495 320 QVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 320 ~~~~~~al~l~p~~~~~~ 337 (340)
+..|+++++++|++..++
T Consensus 91 ~~~~~~al~~~p~~~~a~ 108 (259)
T d1xnfa_ 91 YEAFDSVLELDPTYNYAH 108 (259)
T ss_dssp HHHHHHHHHHCTTCTHHH
T ss_pred hhhhhHHHHHHhhhhhhH
Confidence 999999999999987664
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.32 E-value=1.4e-11 Score=97.47 Aligned_cols=105 Identities=8% Similarity=-0.032 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcc---------------------hHHhhhhHHHHHhcCChHHHH
Q 019495 228 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---------------------PTVYARRSLCYLMSDMPQDAL 286 (340)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~---------------------~~~~~~~~~~~~~~~~~~~A~ 286 (340)
....+.....|..+...|++++|++.|++|+++.+... ..++.+++.++...|++++|+
T Consensus 8 ~~~f~~~~~~g~~~~~~g~~e~A~~~~~~AL~l~rG~~l~~~~~~~w~~~~r~~l~~~~~~a~~~la~~~~~~g~~~~Al 87 (179)
T d2ff4a2 8 LGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVI 87 (179)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHH
Confidence 45667889999999999999999999999999877520 146778899999999999999
Q ss_pred HHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhh-------hccccc
Q 019495 287 NDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEG-------TTLEAK 332 (340)
Q Consensus 287 ~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a-------l~l~p~ 332 (340)
.+++++++++|.+..+|..++.+|..+|++.+|+..|+++ |-++|.
T Consensus 88 ~~~~~al~~~P~~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~ 140 (179)
T d2ff4a2 88 AELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPG 140 (179)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcC
Confidence 9999999999999999999999999999999999999998 556665
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.25 E-value=2e-11 Score=95.79 Aligned_cols=91 Identities=13% Similarity=0.099 Sum_probs=84.0
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
.....+.++|..+++.|+|++|+..|+++|+++|+ ++.+|+++|.+|..+|++++|+.+|+++++++|++..++..++.
T Consensus 75 ~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~-~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~~~l~~ 153 (169)
T d1ihga1 75 VALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLK 153 (169)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhhh-hhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 34556778899999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHH
Q 019495 309 ALSAMGMENEAQ 320 (340)
Q Consensus 309 ~~~~~~~~~~A~ 320 (340)
+...+..+.++.
T Consensus 154 ~~~~l~~~~~~~ 165 (169)
T d1ihga1 154 VKQKIKAQKDKE 165 (169)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 998888777764
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.24 E-value=5.2e-12 Score=89.20 Aligned_cols=71 Identities=10% Similarity=-0.194 Sum_probs=64.0
Q ss_pred HHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCc-------hHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 267 TVYARRSLCYLMSDMPQDALNDAMQAQIISPIW-------HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~-------~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
+-.+.+|.++...|+|.+|+.+|++|+++.|.+ ..+++++|.+++.+|++++|+.+|+++|+++|++..|+
T Consensus 6 ddc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~ 83 (95)
T d1tjca_ 6 EDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (95)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHH
Confidence 345678999999999999999999999986543 67899999999999999999999999999999998764
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.22 E-value=3.6e-11 Score=88.25 Aligned_cols=82 Identities=9% Similarity=-0.059 Sum_probs=76.3
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
.+...+...|..++..|+|++|+..|+++++++|+ ++..|.++|.++..+|++++|+..|+++++++|+++.++..++.
T Consensus 35 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 113 (117)
T d1elwa_ 35 HNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQN 113 (117)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred cchhhhhcccccccccccccccchhhhhHHHhccc-hhhHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 34557889999999999999999999999999999 88999999999999999999999999999999999999999887
Q ss_pred HHH
Q 019495 309 ALS 311 (340)
Q Consensus 309 ~~~ 311 (340)
+..
T Consensus 114 l~~ 116 (117)
T d1elwa_ 114 MEA 116 (117)
T ss_dssp HHH
T ss_pred HhC
Confidence 653
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.21 E-value=3e-11 Score=94.92 Aligned_cols=89 Identities=12% Similarity=0.037 Sum_probs=82.2
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHH
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 312 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 312 (340)
.+...|..+++.|+|++|+..++++|+++|+ +..+++++|.||..+|++++|+.+|++|++++|++..+...++.++..
T Consensus 64 ~~~nla~~y~k~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~ 142 (170)
T d1p5qa1 64 SHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQR 142 (170)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhcccccchhhhhhhcccc-chhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 4456889999999999999999999999999 899999999999999999999999999999999999999999999988
Q ss_pred cCChHHHHHH
Q 019495 313 MGMENEAQVA 322 (340)
Q Consensus 313 ~~~~~~A~~~ 322 (340)
++++.+....
T Consensus 143 ~~~~~~~e~~ 152 (170)
T d1p5qa1 143 IRRQLAREKK 152 (170)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888776543
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.21 E-value=8.4e-12 Score=90.99 Aligned_cols=71 Identities=14% Similarity=-0.028 Sum_probs=66.8
Q ss_pred HHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 267 TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
..++..|.++...|++.+|+..++++++++|+++.+|+.+|.++..+|++++|+.+|++|++++|++..++
T Consensus 17 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 87 (112)
T d1hxia_ 17 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVH 87 (112)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhhhcccccccchhhhhhhhhhhhhhhHHHhhcccccccccccccccch
Confidence 34567899999999999999999999999999999999999999999999999999999999999988765
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.21 E-value=4e-11 Score=94.01 Aligned_cols=94 Identities=13% Similarity=0.079 Sum_probs=83.9
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHH
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 312 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 312 (340)
.+.+.|..++..|+|.+|+..++++|+++|+ +...|+++|.+|..+|++++|+++|+++++++|++..++..++.+...
T Consensus 66 ~~~Nla~~~~~l~~~~~Ai~~~~~al~l~p~-~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~ 144 (168)
T d1kt1a1 66 AFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMCQKK 144 (168)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHhhhcccchhhhhhhhhcccc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999 889999999999999999999999999999999999999999999988
Q ss_pred cCChHHH-HHHHHhhh
Q 019495 313 MGMENEA-QVALKEGT 327 (340)
Q Consensus 313 ~~~~~~A-~~~~~~al 327 (340)
++++.+. ...|.+.+
T Consensus 145 ~~~~~e~~kk~~~~~f 160 (168)
T d1kt1a1 145 AKEHNERDRRTYANMF 160 (168)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHH
Confidence 8877654 34444433
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.19 E-value=1.8e-11 Score=98.36 Aligned_cols=72 Identities=10% Similarity=0.015 Sum_probs=67.6
Q ss_pred hHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 266 PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
+.-+...|..+++.|+|++|+..|++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..+|
T Consensus 4 a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~ 75 (201)
T d2c2la1 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAH 75 (201)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHHH
Confidence 455667899999999999999999999999999999999999999999999999999999999999987765
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.18 E-value=2.3e-11 Score=90.88 Aligned_cols=71 Identities=13% Similarity=-0.054 Sum_probs=66.6
Q ss_pred HHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 267 TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
..+.++|.++...|+|++|+..|.++|+++|+++.+++++|.+|..+|+|++|+.++++|++++|++..++
T Consensus 5 ~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 75 (128)
T d1elra_ 5 LKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDY 75 (128)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHH
Confidence 44567899999999999999999999999999999999999999999999999999999999999987654
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.16 E-value=1.2e-10 Score=90.21 Aligned_cols=94 Identities=14% Similarity=-0.009 Sum_probs=83.2
Q ss_pred HHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHH
Q 019495 229 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 308 (340)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 308 (340)
.....+...|..++..|++++|+..|+++|+++|+ +..+|.++|.++..+|++++|+.+++++++++|++..++..++.
T Consensus 42 ~~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~-~~~a~~~~g~~~~~~g~~~eA~~~~~~a~~~~p~~~~~~~~l~~ 120 (159)
T d1a17a_ 42 SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQE 120 (159)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred hhhhhhhhhHHHHHhccccchHHHHHHHHHHHccc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 45567889999999999999999999999999999 88999999999999999999999999999999999999888877
Q ss_pred HHH--HcCChHHHHHHH
Q 019495 309 ALS--AMGMENEAQVAL 323 (340)
Q Consensus 309 ~~~--~~~~~~~A~~~~ 323 (340)
+.. ..+.+++|+...
T Consensus 121 ~~~~~~~~~~~~a~~~~ 137 (159)
T d1a17a_ 121 CNKIVKQKAFERAIAGD 137 (159)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCc
Confidence 654 445577776543
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.15 E-value=4.9e-11 Score=91.96 Aligned_cols=82 Identities=9% Similarity=0.051 Sum_probs=76.2
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHH
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 312 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 312 (340)
.+.+.|..+++.|+|++|++.|+++|+++|. +..+|+++|.+|..+|++++|+.+|+++++++|++..+...++.+...
T Consensus 69 ~~~Nla~~~~~l~~~~~Al~~~~~al~~~p~-~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~k 147 (153)
T d2fbna1 69 CNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNK 147 (153)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHhcccchhhhhhhccccccch-hhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999 889999999999999999999999999999999999999999888776
Q ss_pred cCC
Q 019495 313 MGM 315 (340)
Q Consensus 313 ~~~ 315 (340)
+++
T Consensus 148 l~~ 150 (153)
T d2fbna1 148 LKE 150 (153)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.07 E-value=2.8e-10 Score=99.04 Aligned_cols=116 Identities=9% Similarity=-0.066 Sum_probs=96.3
Q ss_pred hhhhhhHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCC--hHHHHHHHHHHhhhCCC
Q 019495 221 FQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM--PQDALNDAMQAQIISPI 298 (340)
Q Consensus 221 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~--~~~A~~~~~~al~~~p~ 298 (340)
+..|..+..-...+...+......|++++|+..|+++++.+|+ +..+|..++.++...++ +.+|+..++++++++|.
T Consensus 63 ~~a~~~r~~~l~~l~~~~~~~~~~~~~~~al~~~~~~l~~~pk-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~ 141 (334)
T d1dcea1 63 ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEADER 141 (334)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhCCC-cHHHHHHhhHHHHHhccccHHHHHHHHHHHHhhCch
Confidence 3455555555566677777788888999999999999999999 88888888888877765 78999999999999999
Q ss_pred chHHH-HHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 299 WHIAS-YLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 299 ~~~a~-~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
+..++ +..|.++...+++++|+..++++++++|++..+|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~Al~~~~~~i~~~p~~~~a~ 181 (334)
T d1dcea1 142 NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSW 181 (334)
T ss_dssp CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHH
T ss_pred hhhhhhhHHHHHHHhccccHHHHHHHHHHHHcCCCCHHHH
Confidence 88886 4568889999999999999999999999887765
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.01 E-value=8.9e-11 Score=108.14 Aligned_cols=107 Identities=8% Similarity=-0.069 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHH
Q 019495 228 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 307 (340)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 307 (340)
......+...|..+.+.|++++|+..|++++..++. ..+.++|.++...|++++|+.+|++|++++|++..+|+++|
T Consensus 117 ~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~---~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~~~~~~~~Lg 193 (497)
T d1ya0a1 117 LPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQ---HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLA 193 (497)
T ss_dssp --------------------------CCHHHHHHHH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHH
T ss_pred hhhHHHHHHhHHHHHhCCCHHHHHHHHHHHhCCCHH---HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCchHHHHHHH
Confidence 345566788899999999999999999999988765 46777899999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 308 AALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 308 ~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
.++...|++.+|+.+|.+|+.++|..+.|+
T Consensus 194 ~~~~~~~~~~~A~~~y~ral~~~~~~~~a~ 223 (497)
T d1ya0a1 194 ILASSKGDHLTTIFYYCRSIAVKFPFPAAS 223 (497)
T ss_dssp HHHHHTTCHHHHHHHHHHHHSSSBCCHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhCCCCCHHHH
Confidence 999999999999999999999999877654
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=99.00 E-value=9.6e-10 Score=92.21 Aligned_cols=100 Identities=13% Similarity=0.008 Sum_probs=85.2
Q ss_pred HHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHH-----------
Q 019495 237 KGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL----------- 305 (340)
Q Consensus 237 ~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~----------- 305 (340)
+++.+++.|++++|+..|+++++.+|+ +..++.+++.+|...|++++|++.++++++++|++..++..
T Consensus 2 q~~~aL~~G~l~eAl~~l~~al~~~P~-d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~~~~l~~ll~a~~~~ 80 (264)
T d1zbpa1 2 QWKNALSEGQLQQALELLIEAIKASPK-DASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQAR 80 (264)
T ss_dssp CHHHHTTTTCHHHHHHHHHHHHHTCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcccc
Confidence 367789999999999999999999999 89999999999999999999999999999998876544433
Q ss_pred ------------------------HHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 306 ------------------------QAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 306 ------------------------~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
.+.++...|++++|.+.+++++++.|.....+
T Consensus 81 ~~a~~~~~~~~~~~~p~~~~~~l~~a~~~~~~gd~~~A~~~~~~a~e~~p~~~~~~ 136 (264)
T d1zbpa1 81 KDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEKGFLA 136 (264)
T ss_dssp HHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCCEEE
T ss_pred HHHHHHhhhhhcccCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCCCccc
Confidence 56666777888888888888888888876554
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.95 E-value=1.1e-09 Score=80.69 Aligned_cols=84 Identities=13% Similarity=0.021 Sum_probs=71.9
Q ss_pred HHHHHHHHHhHHhh---hcCHHHHHHHHHHHHhcCCCcc-hHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHH
Q 019495 230 ETLNSKKKGDVAFR---QKDLKDAIECYTQFIDAGTMVS-PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 305 (340)
Q Consensus 230 ~~~~~~~~a~~~~~---~~~~~~A~~~~~~al~~~p~~~-~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 305 (340)
.....++.|..++. .+++++|+..|+++++.+|... ..+++++|.+|..+|++++|++.++++|+++|++.+|...
T Consensus 32 ~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~y~~~g~~~~A~~~~~~aL~~~P~~~~A~~l 111 (122)
T d1nzna_ 32 SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKEL 111 (122)
T ss_dssp CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCcCCHHHHHH
Confidence 44567888888875 5677789999999999998722 3578899999999999999999999999999999999998
Q ss_pred HHHHHHHc
Q 019495 306 QAAALSAM 313 (340)
Q Consensus 306 ~g~~~~~~ 313 (340)
++.+...+
T Consensus 112 ~~~I~~~~ 119 (122)
T d1nzna_ 112 ERLIDKAM 119 (122)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88776654
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.94 E-value=6.5e-10 Score=84.60 Aligned_cols=90 Identities=14% Similarity=-0.031 Sum_probs=74.8
Q ss_pred HHHHHHHHHHhHHh----------hhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCC-----------hHHHHH
Q 019495 229 QETLNSKKKGDVAF----------RQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM-----------PQDALN 287 (340)
Q Consensus 229 ~~~~~~~~~a~~~~----------~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~-----------~~~A~~ 287 (340)
.++..+...|..+. ..+.+++|+..|+++|+++|+ ++.+|+++|.+|..+|+ |.+|++
T Consensus 29 ~~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~-~~~a~~~lG~~y~~~g~~~~~~~~~~~~~~~A~~ 107 (145)
T d1zu2a1 29 LDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQ 107 (145)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcch-hhHHHhhHHHHHHHcccchhhHHHHHHhHHHhhh
Confidence 33445556666555 456779999999999999999 89999999999987653 789999
Q ss_pred HHHHHhhhCCCchHHHHHHHHHHHHcCChHHH
Q 019495 288 DAMQAQIISPIWHIASYLQAAALSAMGMENEA 319 (340)
Q Consensus 288 ~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A 319 (340)
.|++|++++|++..++..++.+....+.|.++
T Consensus 108 ~~~kal~l~P~~~~~~~~L~~~~ka~~~~~e~ 139 (145)
T d1zu2a1 108 FFQQAVDEQPDNTHYLKSLEMTAKAPQLHAEA 139 (145)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHTHHHHHHHH
T ss_pred hhhcccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998777666665
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.90 E-value=1.5e-09 Score=92.44 Aligned_cols=103 Identities=12% Similarity=0.020 Sum_probs=88.4
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCC-----CcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCc------
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGT-----MVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW------ 299 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p-----~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------ 299 (340)
+..+.+.|+.+...|+|++|+++|.+|+++.. ......|.++|.||..+|++++|++.+++++++.++.
T Consensus 37 a~~y~~aa~~y~~~~~~~~A~~~y~kA~~~~~~~~~~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 116 (290)
T d1qqea_ 37 ADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRG 116 (290)
T ss_dssp HHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccchhH
Confidence 45778889999999999999999999998632 1145788999999999999999999999999987665
Q ss_pred hHHHHHHHHHHHH-cCChHHHHHHHHhhhcccccc
Q 019495 300 HIASYLQAAALSA-MGMENEAQVALKEGTTLEAKK 333 (340)
Q Consensus 300 ~~a~~~~g~~~~~-~~~~~~A~~~~~~al~l~p~~ 333 (340)
..++.++|.+|.. +|++++|++.|++|+++.+..
T Consensus 117 ~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~ 151 (290)
T d1qqea_ 117 ANFKFELGEILENDLHDYAKAIDCYELAGEWYAQD 151 (290)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 6778889988865 699999999999999987764
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.84 E-value=6.5e-09 Score=90.14 Aligned_cols=91 Identities=10% Similarity=-0.087 Sum_probs=79.7
Q ss_pred CHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhc----------CChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCC
Q 019495 246 DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS----------DMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGM 315 (340)
Q Consensus 246 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~----------~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~ 315 (340)
..++|++.++++|+.+|+ +.++|+.++.++..+ +++.+|+..++++++.+|+++.+|+.+|.++..+++
T Consensus 44 ~~~~al~~~~~~l~~~P~-~~~a~~~r~~~l~~l~~~~~~~~~~~~~~~al~~~~~~l~~~pk~~~~~~~~~~~~~~~~~ 122 (334)
T d1dcea1 44 LDESVLELTSQILGANPD-FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPE 122 (334)
T ss_dssp CSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSS
T ss_pred ccHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHhhHHHHHhcc
Confidence 348999999999999999 888887777665543 347899999999999999999999999999999876
Q ss_pred --hHHHHHHHHhhhcccccccccc
Q 019495 316 --ENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 316 --~~~A~~~~~~al~l~p~~~~~~ 337 (340)
+++|+..++++++++|.+..++
T Consensus 123 ~~~~~a~~~~~~al~~~~~~~~~~ 146 (334)
T d1dcea1 123 PNWARELELCARFLEADERNFHCW 146 (334)
T ss_dssp CCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred ccHHHHHHHHHHHHhhCchhhhhh
Confidence 8999999999999999976554
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.81 E-value=9.9e-09 Score=87.27 Aligned_cols=108 Identities=8% Similarity=-0.196 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCc-----chHHhhhhHHHHHh-cCChHHHHHHHHHHhhhCCC---
Q 019495 228 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLM-SDMPQDALNDAMQAQIISPI--- 298 (340)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~-~~~~~~A~~~~~~al~~~p~--- 298 (340)
...+..+.+.|+.+.+.|++++|++.|++++++.+.. ...++.++|.+|.. .|++++|++.+++|+++.+.
T Consensus 74 ~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~~~ 153 (290)
T d1qqea_ 74 DEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQS 153 (290)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccchhHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 3445678889999999999999999999999876552 24667778888765 69999999999999988533
Q ss_pred ---chHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccc
Q 019495 299 ---WHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 335 (340)
Q Consensus 299 ---~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~ 335 (340)
...++.++|.++..+|+|++|+..|++++++.+.+..
T Consensus 154 ~~~~~~~~~~la~~~~~~g~y~~A~~~~~~~~~~~~~~~~ 193 (290)
T d1qqea_ 154 VALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred hhhhhhHHHHHHHHHHHcChHHHHHHHHHHHHHhCccchh
Confidence 3566899999999999999999999999999988653
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.73 E-value=3.7e-08 Score=84.59 Aligned_cols=106 Identities=10% Similarity=-0.055 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcc----hHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCc----
Q 019495 228 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS----PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---- 299 (340)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---- 299 (340)
.-.++....+|..++..|++++|++.|+++++..|++. ..++..+|.+|...|++++|+..+++++++.+..
T Consensus 9 ~~~ae~~~lrA~~~~~~g~~~~A~~~~~~aL~~~~~~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 88 (366)
T d1hz4a_ 9 TMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWH 88 (366)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred chhHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCCCcHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcchH
Confidence 34455566689999999999999999999999999832 2467778999999999999999999999876443
Q ss_pred --hHHHHHHHHHHHHcCChHHHHHHHHhhhcccccc
Q 019495 300 --HIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 333 (340)
Q Consensus 300 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 333 (340)
..+++.+|.++...|++.+|...+.+++++.+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~ 124 (366)
T d1hz4a_ 89 YALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQ 124 (366)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhc
Confidence 5678889999999999999999999999887654
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.68 E-value=4e-08 Score=70.87 Aligned_cols=73 Identities=7% Similarity=-0.095 Sum_probs=61.8
Q ss_pred chHHhhhhHHHHHhcC---ChHHHHHHHHHHhhhCCCc-hHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 265 SPTVYARRSLCYLMSD---MPQDALNDAMQAQIISPIW-HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 265 ~~~~~~~~~~~~~~~~---~~~~A~~~~~~al~~~p~~-~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
.....++.|.|+.+.. +.++||..++++++.+|.+ .+++|.+|.+|+.+|+|++|..+++++|+++|++.+|.
T Consensus 34 s~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA~ 110 (124)
T d2pqrb1 34 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVG 110 (124)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CcchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHHH
Confidence 4567777888888654 4568999999999999876 48999999999999999999999999999999988765
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.54 E-value=1.2e-07 Score=81.21 Aligned_cols=104 Identities=10% Similarity=-0.084 Sum_probs=89.0
Q ss_pred HHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcc---hHHhhhhHHHHHhcCChHHHHHHHHHHhhh------CCCch
Q 019495 230 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---PTVYARRSLCYLMSDMPQDALNDAMQAQII------SPIWH 300 (340)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~------~p~~~ 300 (340)
....+...+..+...|++++|...+.++++..+.+. ...+.++|.+|...|++++|+..+++++.. .|...
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 291 (366)
T d1hz4a_ 212 ISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLN 291 (366)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhcccChHHH
Confidence 344567778888999999999999999999887632 345567899999999999999999999844 56778
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHhhhcccccc
Q 019495 301 IASYLQAAALSAMGMENEAQVALKEGTTLEAKK 333 (340)
Q Consensus 301 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 333 (340)
.+++.+|.+|..+|++++|++.|++|+++.+..
T Consensus 292 ~~~~~la~~~~~~g~~~~A~~~l~~Al~l~~~~ 324 (366)
T d1hz4a_ 292 RNLLLLNQLYWQAGRKSDAQRVLLDALKLANRT 324 (366)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhhc
Confidence 899999999999999999999999999987653
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.54 E-value=7.5e-08 Score=73.76 Aligned_cols=64 Identities=16% Similarity=0.066 Sum_probs=57.4
Q ss_pred hHHHHHhcCChHHHHHHHHHHhhhCCCc------------hHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccc
Q 019495 272 RSLCYLMSDMPQDALNDAMQAQIISPIW------------HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 335 (340)
Q Consensus 272 ~~~~~~~~~~~~~A~~~~~~al~~~p~~------------~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~ 335 (340)
.|..++..|+|++|++.|++||+++|+. ..+|.++|.+|..+|+|++|+.++++++++.|+...
T Consensus 15 ~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~~~~~~ 90 (156)
T d2hr2a1 15 DAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGE 90 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhccccccc
Confidence 3778889999999999999999998875 357999999999999999999999999999887544
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.52 E-value=2.2e-07 Score=85.03 Aligned_cols=83 Identities=13% Similarity=-0.026 Sum_probs=77.8
Q ss_pred HHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHH
Q 019495 232 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 311 (340)
Q Consensus 232 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 311 (340)
..+...|..+...|+|++|+..|++|++++|+ +...|+++|.++...|++.+|+.+|.+||.++|.++.|+.+++.++.
T Consensus 153 ~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~-~~~~~~~Lg~~~~~~~~~~~A~~~y~ral~~~~~~~~a~~nL~~~~~ 231 (497)
T d1ya0a1 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPS-NGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS 231 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-BSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 46778899999999999999999999999999 89999999999999999999999999999999999999999999887
Q ss_pred HcCC
Q 019495 312 AMGM 315 (340)
Q Consensus 312 ~~~~ 315 (340)
...+
T Consensus 232 ~~~~ 235 (497)
T d1ya0a1 232 KALE 235 (497)
T ss_dssp HHTT
T ss_pred Hhhh
Confidence 6543
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.43 E-value=8.7e-07 Score=75.50 Aligned_cols=100 Identities=13% Similarity=-0.026 Sum_probs=81.9
Q ss_pred HHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHH-HhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHH
Q 019495 234 SKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCY-LMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 312 (340)
Q Consensus 234 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 312 (340)
+...++.....|+++.|.+.|.++++..|. ....|...+... ...|+.+.|...|+++++.+|+++..|...+..+..
T Consensus 137 w~~~~~~~~~~~~~~~ar~i~~~al~~~~~-~~~~~~~~a~~e~~~~~~~~~a~~i~e~~l~~~p~~~~~w~~y~~~~~~ 215 (308)
T d2onda1 137 YIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSH 215 (308)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 455556667788899999999999999988 777777767654 345788889999999999999999999999999999
Q ss_pred cCChHHHHHHHHhhhccccccc
Q 019495 313 MGMENEAQVALKEGTTLEAKKN 334 (340)
Q Consensus 313 ~~~~~~A~~~~~~al~l~p~~~ 334 (340)
.|++++|...|++|++..|.++
T Consensus 216 ~g~~~~aR~~fe~ai~~~~~~~ 237 (308)
T d2onda1 216 LNEDNNTRVLFERVLTSGSLPP 237 (308)
T ss_dssp TCCHHHHHHHHHHHHHSSSSCG
T ss_pred cCChHHHHHHHHHHHHhCCCCh
Confidence 9999999999999988776543
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.39 E-value=1.7e-07 Score=78.21 Aligned_cols=64 Identities=20% Similarity=-0.019 Sum_probs=59.3
Q ss_pred HHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccc
Q 019495 274 LCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 274 ~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
.-.+..|++++|+..++++++.+|+++.++..+|.+|+.+|++++|+..|+++++++|++..++
T Consensus 4 ~~aL~~G~l~eAl~~l~~al~~~P~d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~~ 67 (264)
T d1zbpa1 4 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGA 67 (264)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHHHH
Confidence 3456789999999999999999999999999999999999999999999999999999976543
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.35 E-value=9.6e-07 Score=75.25 Aligned_cols=105 Identities=9% Similarity=-0.092 Sum_probs=91.8
Q ss_pred HHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH-H
Q 019495 233 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL-S 311 (340)
Q Consensus 233 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~-~ 311 (340)
-+...+......|+++.|...|+++|+..|.+...+|...+......|++++|.+.|+++++..|.....|...|... .
T Consensus 101 l~~~ya~~~~~~~~~~~a~~i~~~~l~~~~~~~~~~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~~~~~~~~~a~~e~~ 180 (308)
T d2onda1 101 LYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYY 180 (308)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 345566777889999999999999999999844557888899999999999999999999999999999999988865 4
Q ss_pred HcCChHHHHHHHHhhhcccccccccc
Q 019495 312 AMGMENEAQVALKEGTTLEAKKNSTA 337 (340)
Q Consensus 312 ~~~~~~~A~~~~~~al~l~p~~~~~~ 337 (340)
..|+.+.|...|+++++.+|.+...|
T Consensus 181 ~~~~~~~a~~i~e~~l~~~p~~~~~w 206 (308)
T d2onda1 181 CSKDKSVAFKIFELGLKKYGDIPEYV 206 (308)
T ss_dssp TSCCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred hccCHHHHHHHHHHHHHhhhhhHHHH
Confidence 56899999999999999999987654
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.31 E-value=1.9e-06 Score=61.86 Aligned_cols=76 Identities=5% Similarity=-0.198 Sum_probs=62.9
Q ss_pred HHHHhHHh---hhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHH
Q 019495 235 KKKGDVAF---RQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 310 (340)
Q Consensus 235 ~~~a~~~~---~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 310 (340)
|+-|-.+. ...+.++|+..++++++.+|.....+++.+|..|.++|+|++|++.++++|+++|++..|...+-.+-
T Consensus 39 F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA~~L~~~Ie 117 (124)
T d2pqrb1 39 FNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVE 117 (124)
T ss_dssp HHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHHHHHHHHHH
Confidence 44444443 44678899999999999998744588899999999999999999999999999999999987665544
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.97 E-value=1.5e-05 Score=61.91 Aligned_cols=62 Identities=15% Similarity=0.163 Sum_probs=58.0
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHh
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQ 293 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al 293 (340)
...+...++.+...|+|++|+..++++++.+|. +..+|..++.+|...|++.+|+..|+++.
T Consensus 67 ~~a~~~la~~~~~~g~~~~Al~~~~~al~~~P~-~e~~~~~l~~al~~~Gr~~eAl~~y~~~~ 128 (179)
T d2ff4a2 67 VLAHTAKAEAEIACGRASAVIAELEALTFEHPY-REPLWTQLITAYYLSDRQSDALGAYRRVK 128 (179)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 346778899999999999999999999999999 88999999999999999999999999983
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=97.97 E-value=3.1e-05 Score=63.72 Aligned_cols=97 Identities=12% Similarity=0.060 Sum_probs=82.8
Q ss_pred HHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHh----cCChHHHHHHHHHHhhhCCCchHHHHHH
Q 019495 231 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWHIASYLQ 306 (340)
Q Consensus 231 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~~~~ 306 (340)
+..++..|..++.++||++|++.|++|.+.+ +..+..++|.+|.. ..++..|+.+++.+.+. .++.+.+.+
T Consensus 2 p~~~~~lG~~~~~~~d~~~A~~~~~kAa~~g---~~~A~~~Lg~~y~~G~~~~~d~~~a~~~~~~a~~~--~~~~a~~~l 76 (265)
T d1ouva_ 2 PKELVGLGAKSYKEKDFTQAKKYFEKACDLK---ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL--NYSNGCHLL 76 (265)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCcchhHHHHHHhhcccccc--cccchhhcc
Confidence 4578889999999999999999999999874 45678889999987 66899999999998876 477888999
Q ss_pred HHHHHH----cCChHHHHHHHHhhhccccc
Q 019495 307 AAALSA----MGMENEAQVALKEGTTLEAK 332 (340)
Q Consensus 307 g~~~~~----~~~~~~A~~~~~~al~l~p~ 332 (340)
|.++.. ..+++.|...++++.+.++.
T Consensus 77 ~~~~~~~~~~~~~~~~a~~~~~~a~~~g~~ 106 (265)
T d1ouva_ 77 GNLYYSGQGVSQNTNKALQYYSKACDLKYA 106 (265)
T ss_dssp HHHHHHTSSSCCCHHHHHHHHHHHHHTTCH
T ss_pred ccccccccccchhhHHHHHHHhhhhhhhhh
Confidence 988875 57899999999999877654
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.83 E-value=8.6e-05 Score=54.37 Aligned_cols=85 Identities=11% Similarity=-0.040 Sum_probs=71.8
Q ss_pred hhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHh----cCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHH----cC
Q 019495 243 RQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWHIASYLQAAALSA----MG 314 (340)
Q Consensus 243 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~----~~ 314 (340)
...++++|++.|+++.+.+ ++...+.+|..|.. ..++.+|+++|+++.+. .++.+.+++|.+|.. ..
T Consensus 35 ~~~~~~~a~~~~~~aa~~g---~~~a~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~a~~~Lg~~y~~G~gv~~ 109 (133)
T d1klxa_ 35 SQINKQKLFQYLSKACELN---SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVK 109 (133)
T ss_dssp TTSCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCC
T ss_pred cccCHHHHHHHHhhhhccc---chhhhhhHHHhhhhccccchhhHHHHHHHhhhhcc--CcchHHHHHHHHHHcCCccCC
Confidence 4568999999999999874 45677778998886 45789999999999887 678999999999887 56
Q ss_pred ChHHHHHHHHhhhccccc
Q 019495 315 MENEAQVALKEGTTLEAK 332 (340)
Q Consensus 315 ~~~~A~~~~~~al~l~p~ 332 (340)
++++|+.+|++|.++...
T Consensus 110 d~~~A~~~~~~Aa~~G~~ 127 (133)
T d1klxa_ 110 NEKQAVKTFEKACRLGSE 127 (133)
T ss_dssp CHHHHHHHHHHHHHTTCH
T ss_pred CHHHHHHHHHHHHHCCCH
Confidence 999999999999877643
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=97.51 E-value=0.00029 Score=57.60 Aligned_cols=96 Identities=21% Similarity=0.123 Sum_probs=77.7
Q ss_pred HHHHHHhHHhh----hcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHh----cCChHHHHHHHHHHhhhCCCchHHHH
Q 019495 233 NSKKKGDVAFR----QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWHIASY 304 (340)
Q Consensus 233 ~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~~ 304 (340)
.+...|..+.. ..+...+...++.+.+.+ +..+.+++|.+|.. ..++.+|+.+|++|.+. .++.+++
T Consensus 144 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~a~~~g---~~~A~~~lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~a~~ 218 (265)
T d1ouva_ 144 GCTILGSLYDAGRGTPKDLKKALASYDKACDLK---DSPGCFNAGNMYHHGEGATKNFKEALARYSKACEL--ENGGGCF 218 (265)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHT--TCHHHHH
T ss_pred hhhhhhhhhccCCCcccccccchhhhhcccccc---ccccccchhhhcccCcccccchhhhhhhHhhhhcc--cCHHHHH
Confidence 34445555553 567888999999988763 45778888999887 56899999999999998 5789999
Q ss_pred HHHHHHHH----cCChHHHHHHHHhhhcccccc
Q 019495 305 LQAAALSA----MGMENEAQVALKEGTTLEAKK 333 (340)
Q Consensus 305 ~~g~~~~~----~~~~~~A~~~~~~al~l~p~~ 333 (340)
++|.+|.. .+++++|+.+|++|.++..+.
T Consensus 219 ~LG~~y~~G~g~~~n~~~A~~~~~kAa~~g~~~ 251 (265)
T d1ouva_ 219 NLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKG 251 (265)
T ss_dssp HHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHH
T ss_pred HHHHHHHcCCCCccCHHHHHHHHHHHHHCcCHH
Confidence 99999986 458999999999999887654
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.31 E-value=0.00057 Score=49.74 Aligned_cols=80 Identities=15% Similarity=-0.007 Sum_probs=64.6
Q ss_pred hcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCChHHHHHHHHHHhhhCCCchHHHHHHHHHHHH----cCChHHH
Q 019495 244 QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA----MGMENEA 319 (340)
Q Consensus 244 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~----~~~~~~A 319 (340)
..|+++|++.|+++.+.+.. .....++. ....++++|+++++++.+. .++.+.+.+|..|.. ..++++|
T Consensus 6 ~kd~~~A~~~~~kaa~~g~~---~a~~~l~~--~~~~~~~~a~~~~~~aa~~--g~~~a~~~Lg~~y~~g~~~~~d~~~A 78 (133)
T d1klxa_ 6 KKDLKKAIQYYVKACELNEM---FGCLSLVS--NSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKA 78 (133)
T ss_dssp HHHHHHHHHHHHHHHHTTCT---THHHHHHT--CTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHH
T ss_pred ccCHHHHHHHHHHHHHCCCh---hhhhhhcc--ccccCHHHHHHHHhhhhcc--cchhhhhhHHHhhhhccccchhhHHH
Confidence 46899999999999998644 33333332 3456899999999999886 688999999999886 5689999
Q ss_pred HHHHHhhhccc
Q 019495 320 QVALKEGTTLE 330 (340)
Q Consensus 320 ~~~~~~al~l~ 330 (340)
+++|+++.+..
T Consensus 79 ~~~~~~aa~~g 89 (133)
T d1klxa_ 79 AQYYSKACGLN 89 (133)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHhhhhccC
Confidence 99999998764
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=93.09 E-value=0.011 Score=49.35 Aligned_cols=28 Identities=21% Similarity=0.170 Sum_probs=25.1
Q ss_pred ccccCCCCCCEEecCCCCeEEeccCCCc
Q 019495 26 ALYHDLNAYRILFDEDGNPRLSTFGLMK 53 (340)
Q Consensus 26 iiH~dlk~~nill~~~~~~kl~dfg~~~ 53 (340)
+||+|+.+.||+++.+...-|.||+.+.
T Consensus 185 iIHgDl~~dNvl~~~~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 185 VIHADLFQDNVFFLGDELSGLIDFYFAC 212 (316)
T ss_dssp EECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred cccCCcchhhhhcccccceeEecccccc
Confidence 9999999999999988777899999754
|
| >d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain-like family: MIT domain domain: Nuclear receptor binding factor 2, NRBF2, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=91.55 E-value=0.17 Score=32.02 Aligned_cols=32 Identities=13% Similarity=0.277 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHH
Q 019495 227 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFI 258 (340)
Q Consensus 227 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al 258 (340)
.++.+...-.+|+.+...|+|++||+++.+|.
T Consensus 4 PLN~AH~~~RrAer~l~~~rydeAIech~kA~ 35 (83)
T d2crba1 4 PLNLAHQQSRRADRLLAAGKYEEAISCHRKAT 35 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45566677788999999999999999887665
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=91.51 E-value=0.035 Score=44.55 Aligned_cols=28 Identities=14% Similarity=0.107 Sum_probs=24.2
Q ss_pred ccccCCCCCCEEecCCCCeEEeccCCCc
Q 019495 26 ALYHDLNAYRILFDEDGNPRLSTFGLMK 53 (340)
Q Consensus 26 iiH~dlk~~nill~~~~~~kl~dfg~~~ 53 (340)
++|+|+.|.||+++.++.+.|+||+.+.
T Consensus 185 l~HgD~~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T d1j7la_ 185 FSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp EECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred EEEeeccCcceeecCCceEEEeechhcc
Confidence 7999999999999977666799998754
|
| >d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Hypothetical protein 1500032H18Rik species: Mouse (Mus musculus) [TaxId: 10090]
Probab=90.79 E-value=0.16 Score=33.59 Aligned_cols=34 Identities=18% Similarity=0.257 Sum_probs=29.4
Q ss_pred hHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHh
Q 019495 226 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFID 259 (340)
Q Consensus 226 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 259 (340)
..+..+..+..+|..+-..|+|++|+.+|.++|+
T Consensus 10 ~~~~~A~~l~~~Av~~D~~g~y~eA~~~Y~~aie 43 (93)
T d1wfda_ 10 SDSTAAVAVLKRAVELDAESRYQQALVCYQEGID 43 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4567788889999999999999999999999875
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=90.70 E-value=0.035 Score=44.33 Aligned_cols=28 Identities=11% Similarity=0.054 Sum_probs=24.3
Q ss_pred ccccCCCCCCEEecCCCCeEEeccCCCc
Q 019495 26 ALYHDLNAYRILFDEDGNPRLSTFGLMK 53 (340)
Q Consensus 26 iiH~dlk~~nill~~~~~~kl~dfg~~~ 53 (340)
++|+|+.|.||+++.++.+.|+||+.+.
T Consensus 177 liHgD~~~~Nvl~~~~~~~~iID~~~~~ 204 (255)
T d1nd4a_ 177 VTHGDACLPNIMVENGRFSGFIDCGRLG 204 (255)
T ss_dssp EECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred EEeCCCCCcceEEeCCceEEEEEchhcc
Confidence 7999999999999987667799998754
|
| >d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain-like family: MIT domain domain: Nuclear receptor binding factor 2, NRBF2, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=87.55 E-value=0.25 Score=31.18 Aligned_cols=25 Identities=28% Similarity=0.198 Sum_probs=14.6
Q ss_pred HHHHHHHHHHcCChHHHHHHHHhhh
Q 019495 303 SYLQAAALSAMGMENEAQVALKEGT 327 (340)
Q Consensus 303 ~~~~g~~~~~~~~~~~A~~~~~~al 327 (340)
+-++|..+...|+|+|||++.++|.
T Consensus 11 ~~RrAer~l~~~rydeAIech~kA~ 35 (83)
T d2crba1 11 QSRRADRLLAAGKYEEAISCHRKAT 35 (83)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3445666666666666666655543
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=86.40 E-value=0.14 Score=43.77 Aligned_cols=27 Identities=15% Similarity=0.100 Sum_probs=23.5
Q ss_pred ccccCCCCCCEEecCCCCeEEeccCCCc
Q 019495 26 ALYHDLNAYRILFDEDGNPRLSTFGLMK 53 (340)
Q Consensus 26 iiH~dlk~~nill~~~~~~kl~dfg~~~ 53 (340)
++|+|+.+.||+++.++ ++|+||.++.
T Consensus 225 LiHGDl~~gNIlv~~~~-~~vID~E~a~ 251 (392)
T d2pula1 225 LIHGDLHTGSIFASEHE-TKVIDPEFAF 251 (392)
T ss_dssp EECSCCCGGGEEECSSC-EEECCCTTCE
T ss_pred eeccCCcCCceeEcCCc-eEEechhhcc
Confidence 89999999999998765 7899998754
|
| >d1wr0a1 a.7.14.1 (A:5-81) Vacuolar sorting protein 4b (VPS4B, SKD1 protein) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Vacuolar sorting protein 4b (VPS4B, SKD1 protein) species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.85 E-value=0.22 Score=31.61 Aligned_cols=34 Identities=12% Similarity=0.304 Sum_probs=26.3
Q ss_pred hHHHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHh
Q 019495 226 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFID 259 (340)
Q Consensus 226 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 259 (340)
+.++.+..+..+|...=..|+|++|+.+|.+|++
T Consensus 6 ~~l~~A~~l~~~Av~~D~~~~y~~A~~~Y~~a~~ 39 (77)
T d1wr0a1 6 PNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQ 39 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4556677778888888888888888888888765
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=83.60 E-value=0.23 Score=41.16 Aligned_cols=27 Identities=26% Similarity=0.345 Sum_probs=22.0
Q ss_pred ccccCCCCCCEEecCCCCeEEeccCCCcc
Q 019495 26 ALYHDLNAYRILFDEDGNPRLSTFGLMKN 54 (340)
Q Consensus 26 iiH~dlk~~nill~~~~~~kl~dfg~~~~ 54 (340)
+||+|+.+.||+++++ ..++||+-+..
T Consensus 194 liHgDlh~~NvL~~~~--~~~IDFdd~~~ 220 (325)
T d1zyla1 194 RLHGDCHAGNILWRDG--PMFVDLDDARN 220 (325)
T ss_dssp ECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred eecCCCCcccEEEeCC--ceEEechhccc
Confidence 8999999999999743 45899987553
|
| >d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-hydrolase/oxidoreductase superfamily: Metallo-hydrolase/oxidoreductase family: Alkylsulfatase-like domain: Alkylsulfatase SdsA1 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=80.60 E-value=0.73 Score=40.56 Aligned_cols=54 Identities=6% Similarity=0.016 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHhHHhhhcCHHHHHHHHHHHHhcCCCcchHHhhhhHHHHHhcCCh
Q 019495 228 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMP 282 (340)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~ 282 (340)
+.-.....++|+.++.+|+|+.|++..+.++..+|+ +..+...++.+|..+|.-
T Consensus 427 ~GG~~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~-~~~ar~l~a~~~~~l~~~ 480 (505)
T d2cfua2 427 MGGAERLLEQARASYARGEYRWVVEVVNRLVFAEPD-NRAARELQADALEQLGYQ 480 (505)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHHHh
Confidence 334457788899999999999999999999999999 778888788887776643
|