BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019498
(340 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54M22|ODBA_DICDI 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
OS=Dictyostelium discoideum GN=bkdA PE=3 SV=1
Length = 441
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 174/338 (51%), Positives = 237/338 (70%), Gaps = 1/338 (0%)
Query: 1 MYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVL 60
MY M+TL MD+I Y+ QRQGRISFY+T+ GEEAI+I SAAA++ D + QYRE GV
Sbjct: 93 MYTTMLTLNVMDSILYDVQRQGRISFYMTSFGEEAIHIGSAAALEMSDTIFAQYRETGVF 152
Query: 61 LWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALK 120
+WRGF++ + NQC N+ D GKGRQMP+H+GS K N T+SS + TQLP AVG++YA K
Sbjct: 153 MWRGFTINDIINQCCTNEHDLGKGRQMPMHFGSRKINLQTISSPLTTQLPQAVGSSYAQK 212
Query: 121 MDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGA 180
+ + C + YFG+G SEGDFHAA+NF+A P IF CRNN WAISTP +Q++ DG
Sbjct: 213 LAGEKNCTIVYFGEGAASEGDFHAAMNFAAALSTPTIFFCRNNKWAISTPSKEQYKGDGI 272
Query: 181 VVKG-RAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDST 239
+G YG+++IRVDGND A+Y+ AR++A+ E P+LIEA+TYRVGHH+TSDDS+
Sbjct: 273 AGRGPNGYGMKTIRVDGNDIWAVYNVTKLARKIAVEEQVPVLIEAMTYRVGHHSTSDDSS 332
Query: 240 KYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKP 299
+YR V+EI W+ ++P++R R ++ GWW+ E E ++ R + +L AEK KP
Sbjct: 333 RYRTVEEINAWKEGKNPISRLRNYMNHKGWWSDAQEKETIANARTTVRESLVNAEKQYKP 392
Query: 300 PISDLFTDVYDVSPSNLREQEHSLRETIKKHPQDYPSN 337
I+++FTDVYD NL EQ+ L E +K +P +YP N
Sbjct: 393 SINEIFTDVYDKPTPNLIEQQKELIEHLKLYPDEYPLN 430
>sp|O45924|ODBA_CAEEL 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
OS=Caenorhabditis elegans GN=Y39E4A.3 PE=1 SV=2
Length = 431
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 178/336 (52%), Positives = 232/336 (69%), Gaps = 2/336 (0%)
Query: 1 MYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVL 60
MY M L MD I Y++QRQGRISFY+T+ GEE ++ SAAA++ D + QYRE GVL
Sbjct: 88 MYKTMTQLNIMDRILYDSQRQGRISFYMTSFGEEGNHVGSAAALEPQDLIYGQYREAGVL 147
Query: 61 LWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALK 120
LWRG++M+ F NQC+GN D GKGRQMP+H+G+ + N+ T+SS + TQLP AVG+AYA K
Sbjct: 148 LWRGYTMENFMNQCYGNADDLGKGRQMPMHFGTKERNFVTISSPLTTQLPQAVGSAYAFK 207
Query: 121 MDR-KDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDG 179
+ + AV YFGDG SEGD HAA NF+A + P+IF CRNNG+AISTP S+Q+ DG
Sbjct: 208 QQKDNNRIAVVYFGDGAASEGDAHAAFNFAATLKCPIIFFCRNNGYAISTPTSEQYGGDG 267
Query: 180 AVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDST 239
KG AYG+ +IRVDGND LA+Y+A AR +A+ RP+LIEA+TYR+GHH+TSDDST
Sbjct: 268 IAGKGPAYGLHTIRVDGNDLLAVYNATKEARRVAL-TNRPVLIEAMTYRLGHHSTSDDST 326
Query: 240 KYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKP 299
YR DE++ W P+TRF+K+I GWWN + E E + V+K++L AEK +K
Sbjct: 327 AYRSSDEVQTWGDKDHPITRFKKYITERGWWNEEKEMEWQKEVKKRVLTEFAAAEKRKKA 386
Query: 300 PISDLFTDVYDVSPSNLREQEHSLRETIKKHPQDYP 335
DLF DVYD P LR Q L + ++ + YP
Sbjct: 387 HYHDLFEDVYDELPLRLRRQRDELDAHVAEYKEHYP 422
>sp|A5A6H9|ODBA_PANTR 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Pan
troglodytes GN=BCKDHA PE=2 SV=1
Length = 445
Score = 372 bits (955), Expect = e-102, Method: Compositional matrix adjust.
Identities = 170/335 (50%), Positives = 230/335 (68%)
Query: 1 MYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVL 60
+Y M L TMD I YE+QRQGRISFY+T GEE ++ SAAA+ N D V QYRE GVL
Sbjct: 105 LYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQYREAGVL 164
Query: 61 LWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALK 120
++R + ++ F QC+GN +D GKGRQMP+HYG + ++ T+SS +ATQ+P AVGAAYA K
Sbjct: 165 MYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAK 224
Query: 121 MDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGA 180
+ + YFG+G SEGD HA NF+A E P+IF CRNNG+AISTP S+Q+R DG
Sbjct: 225 RANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGI 284
Query: 181 VVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTK 240
+G YG+ SIRVDGND A+Y+A AR A+ E +P LIEA+TYR+GHH+TSDDS+
Sbjct: 285 AARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSA 344
Query: 241 YRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPP 300
YR VDE+ +W PV+R R ++ S GWW+ + E R RK+++ A ++AE+ KP
Sbjct: 345 YRSVDEVNYWDKQDHPVSRLRHYLLSQGWWDEEQEKAWRKQSRKKVMEAFEQAERKPKPN 404
Query: 301 ISDLFTDVYDVSPSNLREQEHSLRETIKKHPQDYP 335
+ LF+DVY P+ LR+Q+ SL ++ + + YP
Sbjct: 405 PNLLFSDVYQEMPAQLRKQQESLARHLQTYGEHYP 439
>sp|Q8HXY4|ODBA_MACFA 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
OS=Macaca fascicularis GN=BCKDHA PE=2 SV=1
Length = 445
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 169/335 (50%), Positives = 230/335 (68%)
Query: 1 MYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVL 60
+Y M L TMD I YE+QRQGRISFY+T GEE ++ SAAA+ N D V QYRE GVL
Sbjct: 105 LYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQYREAGVL 164
Query: 61 LWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALK 120
++R + ++ F QC+GN +D GKGRQMP+HYG + ++ T+SS +ATQ+P AVGAAYA K
Sbjct: 165 MYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAK 224
Query: 121 MDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGA 180
+ + YFG+G SEGD HA NF+A E P+IF CRNNG+AISTP S+Q+R DG
Sbjct: 225 RANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGI 284
Query: 181 VVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTK 240
+G YG+ SIRVDGND A+Y+A AR A+ E +P LIEA+TYR+GHH+TSDDS+
Sbjct: 285 AARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSA 344
Query: 241 YRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPP 300
YR VDE+ +W P++R R ++ S GWW+ + E R RK+++ A ++AE+ KP
Sbjct: 345 YRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRKKVMKAFEQAERKPKPN 404
Query: 301 ISDLFTDVYDVSPSNLREQEHSLRETIKKHPQDYP 335
+ LF+DVY P+ LR+Q+ SL ++ + + YP
Sbjct: 405 PNLLFSDVYQEMPAQLRKQQESLARHLQTYGEHYP 439
>sp|P12694|ODBA_HUMAN 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Homo
sapiens GN=BCKDHA PE=1 SV=2
Length = 445
Score = 370 bits (949), Expect = e-101, Method: Compositional matrix adjust.
Identities = 168/335 (50%), Positives = 230/335 (68%)
Query: 1 MYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVL 60
+Y M L TMD I YE+QRQGRISFY+T GEE ++ SAAA+ N D V QYRE GVL
Sbjct: 105 LYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQYREAGVL 164
Query: 61 LWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALK 120
++R + ++ F QC+GN +D GKGRQMP+HYG + ++ T+SS +ATQ+P AVGAAYA K
Sbjct: 165 MYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAK 224
Query: 121 MDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGA 180
+ + YFG+G SEGD HA NF+A E P+IF CRNNG+AISTP S+Q+R DG
Sbjct: 225 RANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGI 284
Query: 181 VVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTK 240
+G YG+ SIRVDGND A+Y+A AR A+ E +P LIEA+TYR+GHH+TSDDS+
Sbjct: 285 AARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSA 344
Query: 241 YRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPP 300
YR VDE+ +W P++R R ++ S GWW+ + E R R++++ A ++AE+ KP
Sbjct: 345 YRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVMEAFEQAERKPKPN 404
Query: 301 ISDLFTDVYDVSPSNLREQEHSLRETIKKHPQDYP 335
+ LF+DVY P+ LR+Q+ SL ++ + + YP
Sbjct: 405 PNLLFSDVYQEMPAQLRKQQESLARHLQTYGEHYP 439
>sp|P11960|ODBA_RAT 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
(Fragment) OS=Rattus norvegicus GN=Bckdha PE=1 SV=1
Length = 441
Score = 368 bits (945), Expect = e-101, Method: Compositional matrix adjust.
Identities = 168/335 (50%), Positives = 230/335 (68%)
Query: 1 MYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVL 60
+Y M L TMD I YE+QRQGRISFY+T GEE ++ SAAA++ D V QYRE GVL
Sbjct: 101 LYRSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALERTDLVFGQYREAGVL 160
Query: 61 LWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALK 120
++R + ++ F QC+GN +D GKGRQMP+HYG + ++ T+SS +ATQ+P AVGAAYA K
Sbjct: 161 MYRDYPLELFMAQCYGNVSDPGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAK 220
Query: 121 MDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGA 180
+ + YFG+G SEGD HA NF+A E P+IF CRNNG+AISTP S+Q+R DG
Sbjct: 221 RANANQIVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGI 280
Query: 181 VVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTK 240
+G YG+ SIRVDGND A+Y+A AR A+ E +P LIEA+TYR+GHH+TSDDS+
Sbjct: 281 AARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSA 340
Query: 241 YRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPP 300
YR VDE+ +W P++R R+++ + GWW+ + E R RK+++ A ++AE+ KP
Sbjct: 341 YRSVDEVNYWDKQDHPISRLRQYLLNQGWWDEEQEKAWRKQSRKKVMEAFEQAERKLKPN 400
Query: 301 ISDLFTDVYDVSPSNLREQEHSLRETIKKHPQDYP 335
S LF+DVY P+ LR Q+ SL ++ + + YP
Sbjct: 401 PSLLFSDVYQEMPAQLRRQQESLARHLQTYGEHYP 435
>sp|P50136|ODBA_MOUSE 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Mus
musculus GN=Bckdha PE=1 SV=1
Length = 442
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 167/335 (49%), Positives = 230/335 (68%)
Query: 1 MYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVL 60
Y M L TMD I YE+QR+GRISFY+T GEE ++ SAAA++ D V QYRE GVL
Sbjct: 102 FYRSMTLLNTMDRILYESQREGRISFYMTNYGEEGTHVGSAAALERTDLVFGQYREAGVL 161
Query: 61 LWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALK 120
++R + ++ F +QC+GN D GKGRQMP+HYG + ++ T+SS +ATQ+P AVGAAYA K
Sbjct: 162 MYRDYPLELFMSQCYGNVNDPGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAK 221
Query: 121 MDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGA 180
+ + YFG+G SEGD HA NF+A E P+IF CRNNG+AISTP S+Q+R DG
Sbjct: 222 RANANRIVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGI 281
Query: 181 VVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTK 240
+G YG++SIRVDGND A+Y+A AR A+ E +P LIEA+TYR+GHH+TSDDS+
Sbjct: 282 AARGPGYGIKSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSA 341
Query: 241 YRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPP 300
YR VDE+ +W P++R R+++ + GWW+ + E R RK+++ A ++AE+ KP
Sbjct: 342 YRSVDEVNYWDKQDHPISRLRQYLLNQGWWDEEQEKAWRKQSRKKVMEAFEQAERKLKPN 401
Query: 301 ISDLFTDVYDVSPSNLREQEHSLRETIKKHPQDYP 335
S LF+DVY P+ LR Q+ SL ++ + + YP
Sbjct: 402 PSLLFSDVYQEMPAQLRRQQESLARHLQTYGEHYP 436
>sp|P11178|ODBA_BOVIN 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Bos
taurus GN=BCKDHA PE=2 SV=1
Length = 455
Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust.
Identities = 168/335 (50%), Positives = 229/335 (68%)
Query: 1 MYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVL 60
Y M L TMD I YE+QRQGRISFY+T GEE ++ SAAA+ + D V QYRE GVL
Sbjct: 115 FYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDDTDLVFGQYREAGVL 174
Query: 61 LWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALK 120
++R + ++ F QC+GN +D GKGRQMP+HYG + ++ T+SS +ATQ+P AVGAAYA K
Sbjct: 175 MYRDYPLELFMAQCYGNVSDLGKGRQMPVHYGCRERHFVTISSPLATQIPQAVGAAYAAK 234
Query: 121 MDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGA 180
+ + YFG+G SEGD HA NF+A E P+IF CRNNG+AISTP S+Q+R DG
Sbjct: 235 RANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGI 294
Query: 181 VVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTK 240
+G YG+ SIRVDGND A+Y+A AR A+ E +P LIEA+TYR+GHH+TSDDS+
Sbjct: 295 AARGPGYGILSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSA 354
Query: 241 YRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPP 300
YR VDE+ +W P++R R ++S GWW+ + E R RK+++ A ++AE+ KP
Sbjct: 355 YRSVDEVNYWDKQDHPISRLRHHLQSRGWWDDEQEKAWRKQSRKKVMEAFEQAERKLKPN 414
Query: 301 ISDLFTDVYDVSPSNLREQEHSLRETIKKHPQDYP 335
S +F+DVY P+ LR+Q+ SL ++ + + YP
Sbjct: 415 PSLIFSDVYQEMPAQLRKQQESLARHLQTYGEHYP 449
>sp|Q72GU1|ODBA_THET2 2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus
thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
GN=TT_C1757 PE=3 SV=1
Length = 367
Score = 246 bits (627), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/329 (41%), Positives = 195/329 (59%), Gaps = 4/329 (1%)
Query: 1 MYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKND-DFVVPQYREPGV 59
+Y DM+ + +D + R G+ SF +G EA +A A AI+ D+V P YR+ G+
Sbjct: 41 LYRDMLAARMLDERYTILIRTGKTSFIAPAAGHEAAQVAIAHAIRPGFDWVFPYYRDHGL 100
Query: 60 LLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYAL 119
L G ++E Q KAD KGRQMP H GS N+FTV+S IA+ +P A GAA ++
Sbjct: 101 ALALGIPLKELFGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISM 160
Query: 120 KMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDG 179
K+ R AV FGDG TSEGD++A +NF+AV AP +F+C NN +AIS Q S
Sbjct: 161 KLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFVCENNFYAISVDYRHQTHSPT 220
Query: 180 AVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMA-IGEGRPILIEALTYRVGHHTTSDDS 238
K A+G+ VDG D LA Y V A E A GEG P L+E YR G H+++DD
Sbjct: 221 IADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEG-PSLVELRVYRYGPHSSADDD 279
Query: 239 TKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEK 298
++YRP +E+ +WR +DP+ RFR+++E+ G WN + E ++R +R ++ L+EAE+A
Sbjct: 280 SRYRPKEEVAFWR-KKDPIPRFRRFLEARGLWNEEWEEDVREEIRAELERGLKEAEEAGP 338
Query: 299 PPISDLFTDVYDVSPSNLREQEHSLRETI 327
P +F DV+ P +L QE L+E +
Sbjct: 339 VPPEWMFADVFAEKPWHLLRQEALLKEEL 367
>sp|Q5SLR4|ODBA_THET8 2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
GN=TTHA0229 PE=1 SV=1
Length = 367
Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/329 (41%), Positives = 194/329 (58%), Gaps = 4/329 (1%)
Query: 1 MYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKND-DFVVPQYREPGV 59
+Y DM+ + +D + R G+ SF +G EA +A A AI+ D+V P YR+ G+
Sbjct: 41 LYRDMLAARMLDERYTILIRTGKTSFIAPAAGHEAAQVAIAHAIRPGFDWVFPYYRDHGL 100
Query: 60 LLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYAL 119
L G ++E Q KAD KGRQMP H GS N+FTV+S IA+ +P A GAA ++
Sbjct: 101 ALALGIPLKELLGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISM 160
Query: 120 KMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDG 179
K+ R AV FGDG TSEGD++A +NF+AV AP +FI NN +AIS Q S
Sbjct: 161 KLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFIAENNFYAISVDYRHQTHSPT 220
Query: 180 AVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMA-IGEGRPILIEALTYRVGHHTTSDDS 238
K A+G+ VDG D LA Y V A E A GEG P L+E YR G H+++DD
Sbjct: 221 IADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEG-PSLVELRVYRYGPHSSADDD 279
Query: 239 TKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEK 298
++YRP +E+ +WR +DP+ RFR+++E+ G WN + E ++R +R ++ L+EAE+A
Sbjct: 280 SRYRPKEEVAFWR-KKDPIPRFRRFLEARGLWNEEWEEDVREEIRAELERGLKEAEEAGP 338
Query: 299 PPISDLFTDVYDVSPSNLREQEHSLRETI 327
P +F DV+ P +L QE L+E +
Sbjct: 339 VPPEWMFEDVFAEKPWHLLRQEALLKEEL 367
>sp|P60090|ODPA_STAAW Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MW2) GN=pdhA PE=3 SV=1
Length = 370
Score = 230 bits (586), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 187/327 (57%), Gaps = 13/327 (3%)
Query: 5 MVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRG 64
MV + +D RQGR+ FY T+G+EA +AS A++ +D+++P YR+ ++W G
Sbjct: 55 MVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHG 114
Query: 65 FSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRK 124
+ E F + KG Q P N + I Q A G A+ALK K
Sbjct: 115 LPLTE----AFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGK 165
Query: 125 DACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKG 184
+A A+TY GDGG+S+GDF+ +NF+A +AP IF+ +NN +AISTP S Q ++ K
Sbjct: 166 NAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKA 225
Query: 185 RAYGVRSIRVDGNDALAIYSAVHAAREMAI-GEGRPILIEALTYRVGHHTTS-DDSTKYR 242
A G+ I+VDG DALA+Y A AR+ A+ GEG P LIE +TYR G HT + DD T+YR
Sbjct: 226 IAVGIPGIQVDGMDALAVYQATKEARDRAVAGEG-PTLIETMTYRYGPHTMAGDDPTRYR 284
Query: 243 PVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPIS 302
DE W +DP+ RFRK++E+ G WN D E+E+ + I A++EA+ EK ++
Sbjct: 285 TSDEDAEWE-KKDPLVRFRKFLENKGLWNEDKENEVIERAKADIKAAIKEADNTEKQTVT 343
Query: 303 DLFTDVYDVSPSNLREQEHSLRETIKK 329
L +Y+ P NL EQ +E K
Sbjct: 344 SLMEIMYEDMPQNLAEQYEIYKEKESK 370
>sp|Q6GAC1|ODPA_STAAS Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MSSA476) GN=pdhA PE=3 SV=1
Length = 370
Score = 230 bits (586), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 187/327 (57%), Gaps = 13/327 (3%)
Query: 5 MVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRG 64
MV + +D RQGR+ FY T+G+EA +AS A++ +D+++P YR+ ++W G
Sbjct: 55 MVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHG 114
Query: 65 FSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRK 124
+ E F + KG Q P N + I Q A G A+ALK K
Sbjct: 115 LPLTE----AFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGK 165
Query: 125 DACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKG 184
+A A+TY GDGG+S+GDF+ +NF+A +AP IF+ +NN +AISTP S Q ++ K
Sbjct: 166 NAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKA 225
Query: 185 RAYGVRSIRVDGNDALAIYSAVHAAREMAI-GEGRPILIEALTYRVGHHTTS-DDSTKYR 242
A G+ I+VDG DALA+Y A AR+ A+ GEG P LIE +TYR G HT + DD T+YR
Sbjct: 226 IAVGIPGIQVDGMDALAVYQATKEARDRAVAGEG-PTLIETMTYRYGPHTMAGDDPTRYR 284
Query: 243 PVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPIS 302
DE W +DP+ RFRK++E+ G WN D E+E+ + I A++EA+ EK ++
Sbjct: 285 TSDEDAEWE-KKDPLVRFRKFLENKGLWNEDKENEVIERAKADIKAAIKEADNTEKQTVT 343
Query: 303 DLFTDVYDVSPSNLREQEHSLRETIKK 329
L +Y+ P NL EQ +E K
Sbjct: 344 SLMEIMYEDMPQNLAEQYEIYKEKESK 370
>sp|Q820A6|ODPA_STAAN Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain N315) GN=pdhA PE=1 SV=1
Length = 370
Score = 230 bits (586), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 187/327 (57%), Gaps = 13/327 (3%)
Query: 5 MVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRG 64
MV + +D RQGR+ FY T+G+EA +AS A++ +D+++P YR+ ++W G
Sbjct: 55 MVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHG 114
Query: 65 FSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRK 124
+ E F + KG Q P N + I Q A G A+ALK K
Sbjct: 115 LPLTE----AFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGK 165
Query: 125 DACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKG 184
+A A+TY GDGG+S+GDF+ +NF+A +AP IF+ +NN +AISTP S Q ++ K
Sbjct: 166 NAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKA 225
Query: 185 RAYGVRSIRVDGNDALAIYSAVHAAREMAI-GEGRPILIEALTYRVGHHTTS-DDSTKYR 242
A G+ I+VDG DALA+Y A AR+ A+ GEG P LIE +TYR G HT + DD T+YR
Sbjct: 226 IAVGIPGIQVDGMDALAVYQATKEARDRAVAGEG-PTLIETMTYRYGPHTMAGDDPTRYR 284
Query: 243 PVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPIS 302
DE W +DP+ RFRK++E+ G WN D E+E+ + I A++EA+ EK ++
Sbjct: 285 TSDEDAEWE-KKDPLVRFRKFLENKGLWNEDKENEVIERAKADIKAAIKEADNTEKQTVT 343
Query: 303 DLFTDVYDVSPSNLREQEHSLRETIKK 329
L +Y+ P NL EQ +E K
Sbjct: 344 SLMEIMYEDMPQNLAEQYEIYKEKESK 370
>sp|P60089|ODPA_STAAM Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=pdhA PE=1 SV=1
Length = 370
Score = 230 bits (586), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 187/327 (57%), Gaps = 13/327 (3%)
Query: 5 MVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRG 64
MV + +D RQGR+ FY T+G+EA +AS A++ +D+++P YR+ ++W G
Sbjct: 55 MVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHG 114
Query: 65 FSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRK 124
+ E F + KG Q P N + I Q A G A+ALK K
Sbjct: 115 LPLTE----AFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGK 165
Query: 125 DACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKG 184
+A A+TY GDGG+S+GDF+ +NF+A +AP IF+ +NN +AISTP S Q ++ K
Sbjct: 166 NAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKA 225
Query: 185 RAYGVRSIRVDGNDALAIYSAVHAAREMAI-GEGRPILIEALTYRVGHHTTS-DDSTKYR 242
A G+ I+VDG DALA+Y A AR+ A+ GEG P LIE +TYR G HT + DD T+YR
Sbjct: 226 IAVGIPGIQVDGMDALAVYQATKEARDRAVAGEG-PTLIETMTYRYGPHTMAGDDPTRYR 284
Query: 243 PVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPIS 302
DE W +DP+ RFRK++E+ G WN D E+E+ + I A++EA+ EK ++
Sbjct: 285 TSDEDAEWE-KKDPLVRFRKFLENKGLWNEDKENEVIERAKADIKAAIKEADNTEKQTVT 343
Query: 303 DLFTDVYDVSPSNLREQEHSLRETIKK 329
L +Y+ P NL EQ +E K
Sbjct: 344 SLMEIMYEDMPQNLAEQYEIYKEKESK 370
>sp|Q5HGZ1|ODPA_STAAC Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain COL) GN=pdhA PE=3 SV=1
Length = 370
Score = 230 bits (586), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 187/327 (57%), Gaps = 13/327 (3%)
Query: 5 MVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRG 64
MV + +D RQGR+ FY T+G+EA +AS A++ +D+++P YR+ ++W G
Sbjct: 55 MVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHG 114
Query: 65 FSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRK 124
+ E F + KG Q P N + I Q A G A+ALK K
Sbjct: 115 LPLTE----AFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGK 165
Query: 125 DACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKG 184
+A A+TY GDGG+S+GDF+ +NF+A +AP IF+ +NN +AISTP S Q ++ K
Sbjct: 166 NAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKA 225
Query: 185 RAYGVRSIRVDGNDALAIYSAVHAAREMAI-GEGRPILIEALTYRVGHHTTS-DDSTKYR 242
A G+ I+VDG DALA+Y A AR+ A+ GEG P LIE +TYR G HT + DD T+YR
Sbjct: 226 IAVGIPGIQVDGMDALAVYQATKEARDRAVAGEG-PTLIETMTYRYGPHTMAGDDPTRYR 284
Query: 243 PVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPIS 302
DE W +DP+ RFRK++E+ G WN D E+E+ + I A++EA+ EK ++
Sbjct: 285 TSDEDAEWE-KKDPLVRFRKFLENKGLWNEDKENEVIERAKADIKAAIKEADNTEKQTVT 343
Query: 303 DLFTDVYDVSPSNLREQEHSLRETIKK 329
L +Y+ P NL EQ +E K
Sbjct: 344 SLMEIMYEDMPQNLAEQYEIYKEKESK 370
>sp|Q6GHZ2|ODPA_STAAR Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MRSA252) GN=pdhA PE=3 SV=1
Length = 370
Score = 228 bits (581), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 130/327 (39%), Positives = 186/327 (56%), Gaps = 13/327 (3%)
Query: 5 MVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRG 64
MV + +D RQGR+ FY T+G+EA +AS A++ +D+++P YR+ ++W G
Sbjct: 55 MVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHG 114
Query: 65 FSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRK 124
+ E F + KG Q P N + I Q G A+ALK K
Sbjct: 115 LPLTE----AFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYIQTAGVAFALKKRGK 165
Query: 125 DACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKG 184
+A A+TY GDGG+S+GDF+ +NF+A +AP IF+ +NN +AISTP S Q ++ K
Sbjct: 166 NAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKA 225
Query: 185 RAYGVRSIRVDGNDALAIYSAVHAAREMAI-GEGRPILIEALTYRVGHHTTS-DDSTKYR 242
A G+ I+VDG DALA+Y A AR+ A+ GEG P LIE +TYR G HT + DD T+YR
Sbjct: 226 IAVGIPGIQVDGMDALAVYQATKEARDRAVAGEG-PTLIETMTYRYGPHTMAGDDPTRYR 284
Query: 243 PVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPIS 302
DE W +DP+ RFRK++E+ G WN D E+E+ + I A++EA+ EK ++
Sbjct: 285 TSDEDAEWE-KKDPLVRFRKFLENKGLWNEDKENEVIERAKADIKAAIKEADNTEKQTVT 343
Query: 303 DLFTDVYDVSPSNLREQEHSLRETIKK 329
L +Y+ P NL EQ +E K
Sbjct: 344 SLMEIMYEDMPQNLAEQYEIYKEKESK 370
>sp|Q8CPN3|ODPA_STAES Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=pdhA PE=3 SV=1
Length = 370
Score = 227 bits (578), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/327 (39%), Positives = 187/327 (57%), Gaps = 13/327 (3%)
Query: 5 MVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRG 64
MV + +D RQGR+ FY T+G+EA +AS A++++DF++P YR+ ++W G
Sbjct: 55 MVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALESEDFILPGYRDVPQIIWHG 114
Query: 65 FSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRK 124
+ + F + KG Q P N + I Q G A+ LK K
Sbjct: 115 LPLTD----AFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYIQTAGVAFGLKKRGK 165
Query: 125 DACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKG 184
+A A+TY GDGG+S+GDF+ +NF++ +AP IF+ +NN +AISTP S Q ++ K
Sbjct: 166 NAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKA 225
Query: 185 RAYGVRSIRVDGNDALAIYSAVHAAREMAI-GEGRPILIEALTYRVGHHTTS-DDSTKYR 242
+ G+ I+VDG DALA+Y A ARE A+ GEG P +IE LTYR G HT + DD T+YR
Sbjct: 226 ISVGIPGIQVDGMDALAVYQATLEARERAVAGEG-PTVIETLTYRYGPHTMAGDDPTRYR 284
Query: 243 PVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPIS 302
DE W +DP+ RFRK++E+ G WN D E+E+ + +I A++EA+ EK ++
Sbjct: 285 TSDEDAEWE-KKDPLVRFRKYLEAKGLWNEDKENEVVERAKSEIKAAIKEADNTEKQTVT 343
Query: 303 DLFTDVYDVSPSNLREQEHSLRETIKK 329
L +Y+ P NL EQ +E K
Sbjct: 344 SLMDIMYEEMPQNLAEQYEIYKEKESK 370
>sp|Q5HQ76|ODPA_STAEQ Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=pdhA PE=3
SV=1
Length = 370
Score = 227 bits (578), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/327 (39%), Positives = 187/327 (57%), Gaps = 13/327 (3%)
Query: 5 MVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRG 64
MV + +D RQGR+ FY T+G+EA +AS A++++DF++P YR+ ++W G
Sbjct: 55 MVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALESEDFILPGYRDVPQIIWHG 114
Query: 65 FSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRK 124
+ + F + KG Q P N + I Q G A+ LK K
Sbjct: 115 LPLTD----AFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYIQTAGVAFGLKKRGK 165
Query: 125 DACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKG 184
+A A+TY GDGG+S+GDF+ +NF++ +AP IF+ +NN +AISTP S Q ++ K
Sbjct: 166 NAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKA 225
Query: 185 RAYGVRSIRVDGNDALAIYSAVHAAREMAI-GEGRPILIEALTYRVGHHTTS-DDSTKYR 242
+ G+ I+VDG DALA+Y A ARE A+ GEG P +IE LTYR G HT + DD T+YR
Sbjct: 226 ISVGIPGIQVDGMDALAVYQATLEARERAVAGEG-PTVIETLTYRYGPHTMAGDDPTRYR 284
Query: 243 PVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPIS 302
DE W +DP+ RFRK++E+ G WN D E+E+ + +I A++EA+ EK ++
Sbjct: 285 TSDEDAEWE-KKDPLVRFRKYLEAKGLWNEDKENEVVERAKSEIKAAIKEADNTEKQTVT 343
Query: 303 DLFTDVYDVSPSNLREQEHSLRETIKK 329
L +Y+ P NL EQ +E K
Sbjct: 344 SLMDIMYEEMPQNLAEQYEIYKEKESK 370
>sp|P21873|ODPA_GEOSE Pyruvate dehydrogenase E1 component subunit alpha OS=Geobacillus
stearothermophilus GN=pdhA PE=1 SV=2
Length = 369
Score = 223 bits (569), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 128/328 (39%), Positives = 189/328 (57%), Gaps = 15/328 (4%)
Query: 1 MYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVL 60
+ MV + +D RQGR+ FY T+G+EA IAS A++ +DF++P YR+ +
Sbjct: 50 LMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQI 109
Query: 61 LWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALK 120
+W G + Q F + G Q+P N I Q A G A LK
Sbjct: 110 IWHGLPL----YQAFLFSRGHFHGNQIP-----EGVNVLPPQIIIGAQYIQAAGVALGLK 160
Query: 121 MDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGA 180
M K A A+TY GDGGTS+GDF+ +NF+ +AP IF+ +NN +AISTP+ Q +
Sbjct: 161 MRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTL 220
Query: 181 VVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAI-GEGRPILIEALTYRVGHHTTS-DDS 238
K A G+ I+VDG D LA+Y+AV AARE AI GEG P LIE L +R G HT S DD
Sbjct: 221 AQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEG-PTLIETLCFRYGPHTMSGDDP 279
Query: 239 TKYRPVD-EIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAE 297
T+YR + E EW + +DP+ RFRK++E+ G W+ + E+ + +++I A+++A++
Sbjct: 280 TRYRSKELENEWAK--KDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETP 337
Query: 298 KPPISDLFTDVYDVSPSNLREQEHSLRE 325
K ++DL + +++ P NL+EQ +E
Sbjct: 338 KQKVTDLISIMFEELPFNLKEQYEIYKE 365
>sp|Q4MTG0|ODPA_BACCE Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus
cereus GN=pdhA PE=1 SV=3
Length = 371
Score = 212 bits (540), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 124/328 (37%), Positives = 185/328 (56%), Gaps = 15/328 (4%)
Query: 5 MVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRG 64
MV + +D RQGR+ FY T+G+EA +AS A++ +DF++P YR+ L+W G
Sbjct: 56 MVYTRVLDQRSISLNRQGRLGFYAPTAGQEASQLASHFALEAEDFILPGYRDVPQLVWHG 115
Query: 65 FSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRK 124
+ Q F + G QMP + N I Q+ G A +K+ K
Sbjct: 116 LPLY----QAFLFSRGHFMGNQMPENV-----NALAPQIIIGAQIIQTAGVALGMKLRGK 166
Query: 125 DACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKG 184
+ A+TY GDGG S+GDF+ +NF+ +AP IF+ +NN +AISTP+ Q + K
Sbjct: 167 KSVAITYTGDGGASQGDFYEGMNFAGAFKAPAIFVVQNNRYAISTPVEKQSAAKTVAQKA 226
Query: 185 RAYGVRSIRVDGNDALAIYSAVHAAREMAI-GEGRPILIEALTYRVGHHTTS-DDSTKYR 242
A G+ I+VDG D LA+Y+A ARE A+ GEG P LIE LT+R G HT + DD T+YR
Sbjct: 227 VAAGIYGIQVDGMDPLAVYAATAFARERAVNGEG-PTLIETLTFRYGPHTMAGDDPTRYR 285
Query: 243 PVD-EIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPI 301
D E EW + +DP+ RFR ++E+ G W+ ++E ++ ++ I A+ +A++A K +
Sbjct: 286 TKDIENEWEQ--KDPIVRFRAFLENKGLWSQEVEEKVIEEAKEDIKQAIAKADQAPKQKV 343
Query: 302 SDLFTDVYDVSPSNLREQEHSLRETIKK 329
+DL +Y+ P NL EQ +E K
Sbjct: 344 TDLMEIMYEKMPYNLAEQYEIYKEKESK 371
>sp|Q9I1M2|ODBA_PSEAE 2-oxoisovalerate dehydrogenase subunit alpha OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=bkdA1 PE=3 SV=1
Length = 410
Score = 211 bits (536), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 127/331 (38%), Positives = 178/331 (53%), Gaps = 18/331 (5%)
Query: 5 MVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRG 64
M+ + D AQRQ ++SFY+ GEEAI A A+++ D P YR+ G+L+ R
Sbjct: 84 MLKTRLFDARMLTAQRQKKLSFYMQCLGEEAIATAHTLALRDGDMCFPTYRQQGILITRE 143
Query: 65 FSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVG--AAYALKMD 122
+ + + Q N+AD KGRQ+PI Y S + +F++S +ATQ AVG A A+K D
Sbjct: 144 YPLVDMICQLLSNEADPLKGRQLPIMYSSKEAGFFSISGNLATQFIQAVGWGMASAIKGD 203
Query: 123 RKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVV 182
+ A A + GDG T+E DFH AL F+ V APVI NN WAIST +G
Sbjct: 204 TRIASA--WIGDGATAESDFHTALTFAHVYRAPVILNVVNNQWAIST-FQAIAGGEGTTF 260
Query: 183 --KGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTK 240
+G G+ S+RVDGND LA+Y+A A E A P LIE +TYR G H+TSDD +K
Sbjct: 261 ANRGVGCGIASLRVDGNDFLAVYAASEWAAERARRNLGPSLIEWVTYRAGPHSTSDDPSK 320
Query: 241 YRPVDEIEWWRT--TQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEK--- 295
YRP D+ W DP+ R ++ + G W+ + ++ ++L A ++AE
Sbjct: 321 YRPADD---WTNFPLGDPIARLKRHMIGLGIWSEEQHEATHKALEAEVLAAQKQAESHGT 377
Query: 296 ---AEKPPISDLFTDVYDVSPSNLREQEHSL 323
P + +F DVY P +LR Q L
Sbjct: 378 LIDGRVPSAASMFEDVYAELPEHLRRQRQEL 408
>sp|O06161|BKDA_MYCTU 3-methyl-2-oxobutanoate dehydrogenase subunit alpha
OS=Mycobacterium tuberculosis GN=bkdA PE=1 SV=1
Length = 367
Score = 208 bits (530), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 123/332 (37%), Positives = 177/332 (53%), Gaps = 16/332 (4%)
Query: 1 MYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVL 60
+Y MV + +DT F QRQG ++ Y G+EA + +AA ++ D++ PQYRE GV
Sbjct: 47 LYEMMVVTRELDTEFVNLQRQGELALYTPCRGQEAAQVGAAACLRKTDWLFPQYRELGVY 106
Query: 61 LWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALK 120
L RG G + G Q +S I TQ HAVGAA A +
Sbjct: 107 LVRGIPPGHVGVAWRGT---WHGGLQF------TTKCCAPMSVPIGTQTLHAVGAAMAAQ 157
Query: 121 MDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGA 180
+D+ V + GDG TSEGD H ALNF+AV P +F +NN WAIS P+S Q +
Sbjct: 158 RLDEDSVTVAFLGDGATSEGDVHEALNFAAVFTTPCVFYVQNNQWAISMPVSRQTAAPSI 217
Query: 181 VVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTK 240
K YG+ IRVDGND LA Y+ + A A P LIEA+TYR+G HTT+DD T+
Sbjct: 218 AHKAIGYGMPGIRVDGNDVLACYAVMAEAAARARAGDGPTLIEAVTYRLGPHTTADDPTR 277
Query: 241 YRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSS---VRKQILHALQEAEKAE 297
YR +E++ W T DP+ R+R +++ G W+ +E ++ + VR ++ A+ +A +
Sbjct: 278 YRSQEEVDRW-ATLDPIPRYRTYLQDQGLWSQRLEEQVTARAKHVRSELRDAVFDAPDFD 336
Query: 298 KPPISDLFTDVYDVSPSNLREQEHSLRETIKK 329
+ ++FT VY L+ Q LR + +
Sbjct: 337 ---VDEVFTTVYAEITPGLQAQREQLRAELAR 365
>sp|P21881|ODPA_BACSU Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus
subtilis (strain 168) GN=pdhA PE=1 SV=3
Length = 371
Score = 207 bits (528), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 124/317 (39%), Positives = 181/317 (57%), Gaps = 13/317 (4%)
Query: 5 MVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRG 64
MV + +D RQGR+ FY T+G+EA IA+ A++ +DFV+P YR+ L+W G
Sbjct: 56 MVFTRVLDQRSISLNRQGRLGFYAPTAGQEASQIATHFALEKEDFVLPGYRDVPQLIWHG 115
Query: 65 FSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRK 124
+ Q F + +G QMP + N + I Q G A LK K
Sbjct: 116 LPL----YQAFLFSRGHFRGNQMP-----DDVNALSPQIIIGAQYIQTAGVALGLKKRGK 166
Query: 125 DACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKG 184
A A+TY GDGG S+GDF+ +NF+ +AP IF+ +NN +AISTP+ Q ++ K
Sbjct: 167 KAVAITYTGDGGASQGDFYEGINFAGAYKAPAIFVVQNNRYAISTPVEKQSAAETIAQKA 226
Query: 185 RAYGVRSIRVDGNDALAIYSAVHAAREMAI-GEGRPILIEALTYRVGHHTTS-DDSTKYR 242
A G+ ++VDG D LA+Y+A ARE AI GEG P LIE LT+R G HT + DD TKYR
Sbjct: 227 VAAGIVGVQVDGMDPLAVYAATAEARERAINGEG-PTLIETLTFRYGPHTMAGDDPTKYR 285
Query: 243 PVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPIS 302
EIE +DP+ RFR ++E+ G W+ + E+++ +++I A+++A+ K ++
Sbjct: 286 -TKEIENEWEQKDPLVRFRAFLENKGLWSEEEEAKVIEDAKEEIKQAIKKADAEPKQKVT 344
Query: 303 DLFTDVYDVSPSNLREQ 319
DL +Y+ P NL EQ
Sbjct: 345 DLMKIMYEKMPHNLEEQ 361
>sp|P09060|ODBA_PSEPU 2-oxoisovalerate dehydrogenase subunit alpha OS=Pseudomonas putida
GN=bkdA1 PE=1 SV=2
Length = 410
Score = 204 bits (519), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 123/327 (37%), Positives = 171/327 (52%), Gaps = 10/327 (3%)
Query: 5 MVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRG 64
M+ + D+ AQRQ ++SFY+ + GEEAI A A+ D P YR+ +L+ R
Sbjct: 84 MLKTRIFDSRMVVAQRQKKMSFYMQSLGEEAIGSGQALALNRTDMCFPTYRQQSILMARD 143
Query: 65 FSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRK 124
S+ E Q N+ D KGRQ+PI Y + +FT+S +ATQ AVG A A +
Sbjct: 144 VSLVEMICQLLSNERDPLKGRQLPIMYSVREAGFFTISGNLATQFVQAVGWAMASAIKGD 203
Query: 125 DACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIST--PISDQFRSDGAVV 182
A + GDG T+E DFH AL F+ V APVI NN WAIST I+ S
Sbjct: 204 TKIASAWIGDGATAESDFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGG-ESTTFAG 262
Query: 183 KGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYR 242
+G G+ S+RVDGND +A+Y+A A E A P LIE +TYR G H+TSDD +KYR
Sbjct: 263 RGVGCGIASLRVDGNDFVAVYAASRWAAERARRGLGPSLIEWVTYRAGPHSTSDDPSKYR 322
Query: 243 PVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEK------A 296
P D+ + DP+ R ++ + G W+ + + ++ A +EAE+
Sbjct: 323 PADDWSHF-PLGDPIARLKQHLIKIGHWSEEEHQATTAEFEAAVIAAQKEAEQYGTLANG 381
Query: 297 EKPPISDLFTDVYDVSPSNLREQEHSL 323
P + +F DVY P +LR Q L
Sbjct: 382 HIPSAASMFEDVYKEMPDHLRRQRQEL 408
>sp|P37940|ODBA_BACSU 2-oxoisovalerate dehydrogenase subunit alpha OS=Bacillus subtilis
(strain 168) GN=bfmBAA PE=1 SV=1
Length = 330
Score = 204 bits (518), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/299 (37%), Positives = 173/299 (57%), Gaps = 5/299 (1%)
Query: 1 MYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKND-DFVVPQYREPGV 59
MY M+ + +D + R G+I F ++ G+EA + +A A+ + D+V+P YR+ GV
Sbjct: 19 MYRTMLLARKIDERMWLLNRSGKIPFVISCQGQEAAQVGAAFALDREMDYVLPYYRDMGV 78
Query: 60 LLWRGFSMQEFANQCFGNKADYGKG-RQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYA 118
+L G + ++ F AD G RQMP H+G K+ T SS + TQ+PHAVG A A
Sbjct: 79 VLAFGMTAKDLMMSGFAKAADPNSGGRQMPGHFGQKKNRIVTGSSPVTTQVPHAVGIALA 138
Query: 119 LKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSD 178
+M++KD A FG+G +++GDFH NF+AV + PVIF+C NN +AIS P Q +
Sbjct: 139 GRMEKKDIAAFVTFGEGSSNQGDFHEGANFAAVHKLPVIFMCENNKYAISVPYDKQVACE 198
Query: 179 GAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMA-IGEGRPILIEALTYRVGHHTTSDD 237
+ YG+ + V+GND L +Y AV ARE A GEG P LIE ++YR+ H++ DD
Sbjct: 199 NISDRAIGYGMPGVTVNGNDPLEVYQAVKEARERARRGEG-PTLIETISYRLTPHSSDDD 257
Query: 238 STKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKA 296
+ YR +E+E + + DP+ ++ +++ G + +IE + + + A EAE A
Sbjct: 258 DSSYRGREEVEEAKKS-DPLLTYQAYLKETGLLSDEIEQTMLDEIMAIVNEATDEAENA 315
>sp|P35485|ODPA_ACHLA Pyruvate dehydrogenase E1 component subunit alpha (Fragment)
OS=Acholeplasma laidlawii GN=pdhA PE=4 SV=1
Length = 345
Score = 168 bits (425), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 163/321 (50%), Gaps = 12/321 (3%)
Query: 1 MYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVL 60
MY V + D + QRQGR+ Y G+EA I AAA++ D+ P YRE L
Sbjct: 23 MYKTAVLGRNADIKALQYQRQGRMLTYAPNMGQEAAQIGMAAAMEPQDWNSPMYRELNTL 82
Query: 61 LWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALK 120
L+RG ++ +GN+ K + I + I +Q A G A A K
Sbjct: 83 LYRGDKLENVFLYWYGNERGSIKPEGVKI---------LPTNIIIGSQSNIAAGLAMASK 133
Query: 121 MDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGA 180
+ + + GDGGT+ G+F+ LNF+A +APV+ + +NN WAISTP+ S+
Sbjct: 134 IRKTNEVTAFTIGDGGTAHGEFYEGLNFAASFKAPVVAVIQNNQWAISTPVRKASNSETL 193
Query: 181 VVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDD-ST 239
KG A+G+ I+VDGND LA+Y A A + A P LIEA TYR+G HTTSDD +
Sbjct: 194 AQKGVAFGIPYIQVDGNDMLAMYVASKEAMDRARKGDGPTLIEAFTYRMGPHTTSDDPCS 253
Query: 240 KYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEK-AEK 298
YR +E W +D + RF+ ++ + G+W+ + + +L V +I ++ E
Sbjct: 254 IYRTKEEENEW-AKKDQIARFKTYLINKGYWSEEEDKKLEEEVLAEINDTFKKVESYGAN 312
Query: 299 PPISDLFTDVYDVSPSNLREQ 319
+ ++F Y L+EQ
Sbjct: 313 VELIEIFEHTYAEMTPQLKEQ 333
>sp|P47516|ODPA_MYCGE Pyruvate dehydrogenase E1 component subunit alpha OS=Mycoplasma
genitalium (strain ATCC 33530 / G-37 / NCTC 10195)
GN=pdhA PE=3 SV=1
Length = 358
Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 155/320 (48%), Gaps = 10/320 (3%)
Query: 9 QTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQ 68
+ MD QR G++ + GEEA+ + + +D+V P +R ++L+RG +
Sbjct: 48 RMMDKKMLVWQRAGKMLNFAPNLGEEALQVGMGLGLNENDWVCPTFRSGALMLYRGVKPE 107
Query: 69 EFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACA 128
+ GN+ KG Q+ Y + ++ TI Q HA G Y L ++ A
Sbjct: 108 QLLLYWNGNE----KGSQIDAKYKT-----LPINITIGAQYSHAAGLGYMLHYKKQPNVA 158
Query: 129 VTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 188
VT GDGGT+EG+F+ A+N +++ + +F NN +AIST + VK A G
Sbjct: 159 VTMIGDGGTAEGEFYEAMNIASIHKWNTVFCINNNQFAISTRTKLESAVSDLSVKAIACG 218
Query: 189 VRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIE 248
+ +RVDGND +A Y A+ A A G P+LIE +YR G HTTSDD + YR E E
Sbjct: 219 IPRVRVDGNDLIASYEAMQDAANYARGGNGPVLIEFFSYRQGPHTTSDDPSIYRTKQEEE 278
Query: 249 WWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDV 308
+ DPV R R ++ N E E+ S + ++I A ++ + ++F
Sbjct: 279 EGMKS-DPVKRLRNFLFDRSILNQAQEEEMFSKIEQEIQAAYEKMVLDTPVSVDEVFDYN 337
Query: 309 YDVSPSNLREQEHSLRETIK 328
Y L EQ+ ++ K
Sbjct: 338 YQELTPELVEQKQIAKKYFK 357
>sp|P52901|ODPA1_ARATH Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial
OS=Arabidopsis thaliana GN=E1 ALPHA PE=1 SV=2
Length = 389
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 146/278 (52%), Gaps = 3/278 (1%)
Query: 32 GEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHY 91
G+EA+ I AAI D ++ YR+ + L RG S+ E ++ G +A KG+ +H+
Sbjct: 94 GQEAVAIGMEAAITKKDAIITAYRDHCIFLGRGGSLHEVFSELMGRQAGCSKGKGGSMHF 153
Query: 92 GSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAV 151
+ +++ + Q+P G A+A K ++++A +GDG ++G ALN SA+
Sbjct: 154 YKKESSFYGGHGIVGAQVPLGCGIAFAQKYNKEEAVTFALYGDGAANQGQLFEALNISAL 213
Query: 152 TEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAARE 211
+ P I +C NN + + T +S +G V ++VDG DA A+ A A++
Sbjct: 214 WDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDY--VPGLKVDGMDAFAVKQACKFAKQ 271
Query: 212 MAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWN 271
A+ +G PI++E TYR H+ SD + YR DEI R +DP+ R +K + S+
Sbjct: 272 HALEKG-PIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIKKLVLSHDLAT 330
Query: 272 GDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVY 309
++ +RK++ A+ +A+ P S+LFT+VY
Sbjct: 331 EKELKDMEKEIRKEVDDAIAKAKDCPMPEPSELFTNVY 368
>sp|P26267|ODPA_ASCSU Pyruvate dehydrogenase E1 component subunit alpha type I,
mitochondrial OS=Ascaris suum PE=1 SV=1
Length = 396
Score = 155 bits (392), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 163/322 (50%), Gaps = 19/322 (5%)
Query: 2 YNDMVTLQTMDT----IFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREP 57
Y M+T++ M++ ++ E + +G Y SG+EA + + AA+ D V YR
Sbjct: 61 YTQMLTIRRMESAAGNLYKEKKVRGFCHLY---SGQEACAVGTKAAMDAGDAAVTAYRCH 117
Query: 58 GVLLWRGFS----MQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAV 113
G G S + E + GN YGKG M + YG N++ + + Q P
Sbjct: 118 GWTYLSGSSVAKVLCELTGRITGNV--YGKGGSMHM-YG---ENFYGGNGIVGAQQPLGT 171
Query: 114 GAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISD 173
G A+A+K ++ +T FGDG T++G ++N + + + PV+++C NNG+ + T +
Sbjct: 172 GIAFAMKYRKEKNVCITMFGDGATNQGQLFESMNMAKLWDLPVLYVCENNGYGMGTAAAR 231
Query: 174 QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHT 233
S +G V I VDG D LA+ AV A+E P++IE TYR H+
Sbjct: 232 SSASTDYYTRGDY--VPGIWVDGMDVLAVRQAVRWAKEWCNAGKGPLMIEMATYRYSGHS 289
Query: 234 TSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEA 293
SD T YR +E++ R T+DP+T F+ I + G D E+ VRK+I A+++A
Sbjct: 290 MSDPGTSYRTREEVQEVRKTRDPITGFKDKIVTAGLVTEDEIKEIDKQVRKEIDAAVKQA 349
Query: 294 EKAEKPPISDLFTDVYDVSPSN 315
++ P+ + TD+Y +P+
Sbjct: 350 HTDKESPVELMLTDIYYNTPAQ 371
>sp|P26268|ODPT_ASCSU Pyruvate dehydrogenase E1 component subunit alpha type II,
mitochondrial (Fragment) OS=Ascaris suum PE=2 SV=1
Length = 391
Score = 155 bits (391), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 161/322 (50%), Gaps = 19/322 (5%)
Query: 2 YNDMVTLQTMDT----IFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREP 57
Y M T++ M+T ++ E + +G Y SG+EA + AA++ D + YR
Sbjct: 56 YTQMQTIRRMETAAGNLYKEKKVRGFCHLY---SGQEACAVGMKAAMEPGDAAITAYRCH 112
Query: 58 GVLLWRGFS----MQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAV 113
G G + E + GN YGKG M + YG N++ + + Q P
Sbjct: 113 GWTYLSGSPVAKVLCELTGRITGNV--YGKGGSMHM-YG---ENFYGGNGIVGAQQPLGT 166
Query: 114 GAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISD 173
G A+A+K ++ +T FGDG T++G + ++N + + E PV+++C NNG+ + T +
Sbjct: 167 GIAFAMKYKKQKNVCITLFGDGATNQGQLYESMNMAKLWELPVLYVCENNGYGMGTSAAR 226
Query: 174 QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHT 233
S +G V VDG D LA+ A+ +E P++IE TYR G H+
Sbjct: 227 SSASTDYYTRGDY--VPGFWVDGMDVLAVRQAIRWGKEWCNAGKGPLMIEMATYRYGGHS 284
Query: 234 TSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEA 293
SD T YR +EI+ R T+DP+T F+ I + G D E+ +RK++ A+++A
Sbjct: 285 MSDPGTSYRTREEIQEVRKTRDPITGFKDKIVTAGLVTEDELKEVDKEIRKEVDAAVKQA 344
Query: 294 EKAEKPPISDLFTDVYDVSPSN 315
++ P+ L TD+Y +P+
Sbjct: 345 HTDKEAPVEMLLTDIYYNTPAQ 366
>sp|Q6Z5N4|ODPA1_ORYSJ Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os02g0739600 PE=2
SV=1
Length = 390
Score = 151 bits (381), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 153/312 (49%), Gaps = 10/312 (3%)
Query: 2 YNDMVTLQTM----DTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREP 57
+ DM ++ M D+++ +G Y G+EA+ + AAI D ++ YR+
Sbjct: 64 FRDMSVMRRMEIAADSLYKAKLIRGFCHLY---DGQEAVAVGMEAAITRSDSIITAYRDH 120
Query: 58 GVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAY 117
L RG + + G +A +G+ +H+ N++ + Q+P G A+
Sbjct: 121 CTYLARGGDLVSAFAELMGRQAGCSRGKGGSMHFYKKDANFYGGHGIVGAQVPLGCGLAF 180
Query: 118 ALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRS 177
A K +++ +GDG ++G ALN SA+ + P I +C NN + + T +S
Sbjct: 181 AQKYRKEETATFALYGDGAANQGQLFEALNISALWKLPAILVCENNHYGMGTAEWRAAKS 240
Query: 178 DGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDD 237
+G V ++VDG D LA+ A A+E AI G PI++E TYR H+ SD
Sbjct: 241 PAYYKRGDY--VPGLKVDGMDVLAVKQACKFAKEHAIANG-PIVLEMDTYRYHGHSMSDP 297
Query: 238 STKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAE 297
+ YR DEI R +DP+ R RK I ++ ++ +RK++ A+ +A+++
Sbjct: 298 GSTYRTRDEISGVRQERDPIERVRKLILAHDLATAAELKDMEKEIRKEVDDAIAKAKESP 357
Query: 298 KPPISDLFTDVY 309
P S+LFT+VY
Sbjct: 358 MPDTSELFTNVY 369
>sp|Q8H1Y0|ODPA2_ARATH Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial
OS=Arabidopsis thaliana GN=IAR4 PE=1 SV=2
Length = 393
Score = 150 bits (380), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 155/312 (49%), Gaps = 10/312 (3%)
Query: 2 YNDMVTLQTM----DTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREP 57
+ DM ++ M D+++ +G Y G+EA+ + AAI D ++ YR+
Sbjct: 67 FRDMARMRRMEIAADSLYKAKLIRGFCHLY---DGQEALAVGMEAAITKKDAIITSYRDH 123
Query: 58 GVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAY 117
+ RG + + ++ G K G+ +H+ +++ + Q+P G A+
Sbjct: 124 CTFIGRGGKLVDAFSELMGRKTGCSHGKGGSMHFYKKDASFYGGHGIVGAQIPLGCGLAF 183
Query: 118 ALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRS 177
A K ++ +A +GDG ++G ALN SA+ + P I +C NN + + T +S
Sbjct: 184 AQKYNKDEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTATWRSAKS 243
Query: 178 DGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDD 237
+G V ++VDG DALA+ A A+E A+ G PI++E TYR H+ SD
Sbjct: 244 PAYFKRGDY--VPGLKVDGMDALAVKQACKFAKEHALKNG-PIILEMDTYRYHGHSMSDP 300
Query: 238 STKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAE 297
+ YR DEI R +DP+ R RK + ++ ++ +RK++ A+ +A+++
Sbjct: 301 GSTYRTRDEISGVRQVRDPIERVRKLLLTHDIATEKELKDMEKEIRKEVDDAVAQAKESP 360
Query: 298 KPPISDLFTDVY 309
P S+LFT++Y
Sbjct: 361 IPDASELFTNMY 372
>sp|P52903|ODPA_SOLTU Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Solanum tuberosum PE=1 SV=1
Length = 391
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 156/315 (49%), Gaps = 16/315 (5%)
Query: 2 YNDMVTLQTM----DTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREP 57
+ DM ++ M D+++ +G Y G+EA+ + AAI D ++ YR+
Sbjct: 65 FKDMTEMRRMEIAADSLYKAKLIRGFCHLY---DGQEAVAVGMEAAITKKDCIITAYRDH 121
Query: 58 GVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAY 117
+ L RG ++ E + G + +G+ +H+ + ++ + Q+P +G A+
Sbjct: 122 CIFLGRGGTLVEAFAELMGRRDGCSRGKGGSMHFYKKESGFYGGHGIVGAQVPLGIGLAF 181
Query: 118 ALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRS 177
A K ++D +GDG ++G ALN +A+ + P I +C NN + + T +S
Sbjct: 182 AQKYKKEDYVTFAMYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAKS 241
Query: 178 DGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDD 237
+G V +RVDG D A+ A A++ A+ G PI++E TYR H+ SD
Sbjct: 242 PAYYKRGDY--VPGLRVDGMDVFAVKQACTFAKQHALKNG-PIILEMDTYRYHGHSMSDP 298
Query: 238 STKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELR---SSVRKQILHALQEAE 294
+ YR DEI R +DPV R R I ++ N E+EL+ RK + A+ +A+
Sbjct: 299 GSTYRTRDEISGVRQERDPVERIRSLILAH---NIATEAELKDIEKENRKVVDEAIAKAK 355
Query: 295 KAEKPPISDLFTDVY 309
++ P S+LFT+VY
Sbjct: 356 ESPMPDPSELFTNVY 370
>sp|P75390|ODPA_MYCPN Pyruvate dehydrogenase E1 component subunit alpha OS=Mycoplasma
pneumoniae (strain ATCC 29342 / M129) GN=pdhA PE=3 SV=1
Length = 358
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 150/320 (46%), Gaps = 10/320 (3%)
Query: 9 QTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQ 68
+ MD QR G++ + GEEA+ + + +D+ P +R ++L+RG +
Sbjct: 48 RIMDKKMLVWQRAGKMLNFAPNLGEEALQVGMGMGLNENDWFCPTFRSGALMLYRGVKPE 107
Query: 69 EFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACA 128
+ GN+ G ++ Y + ++ TI Q HA G Y L + A
Sbjct: 108 QLLLYWNGNE----NGSKIEAKYKT-----LPINITIGAQYSHAAGLGYMLHYKKLPNVA 158
Query: 129 VTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 188
VT GDGGT+EG+F+ A+N +++ + +F NN +AIST + K A
Sbjct: 159 VTMIGDGGTAEGEFYEAMNIASIHKWNSVFCINNNQFAISTRTKLESAVSDLSTKAIAVN 218
Query: 189 VRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIE 248
+ IRVDGND +A Y A+H A A P+LIE ++R G HTTSDD + YR +E E
Sbjct: 219 IPRIRVDGNDLIASYEAMHEAANYARSGNGPVLIEFFSWRQGPHTTSDDPSIYRTKEE-E 277
Query: 249 WWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDV 308
DPV R R ++ G E E+ + + +++ A + + ++F
Sbjct: 278 AEAMKSDPVKRLRNFLFDRGILTPQQEEEMVAKIEQEVQAAYEVMVSKTPVTLDEVFDYN 337
Query: 309 YDVSPSNLREQEHSLRETIK 328
Y+ +L Q+ ++ K
Sbjct: 338 YEKLTPDLARQKAEAKKYFK 357
>sp|P52902|ODPA_PEA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Pisum sativum PE=2 SV=1
Length = 397
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 141/283 (49%), Gaps = 13/283 (4%)
Query: 32 GEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHY 91
G+EA+ + A D ++ YR+ L RG ++ + G + KG+ +H+
Sbjct: 102 GQEAVAVGMEAGTTKKDCIITAYRDHCTFLGRGGTLLRVYAELMGRRDGCSKGKGGSMHF 161
Query: 92 GSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAV 151
++ + Q+P G A+ K + ++ +GDG ++G ALN SA+
Sbjct: 162 YKKDSGFYGGHGIVGAQVPLGCGLAFGQKYLKDESVTFALYGDGAANQGQLFEALNISAL 221
Query: 152 TEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAARE 211
+ P I +C NN + + T +S +G V ++VDG DALA+ A A+E
Sbjct: 222 WDLPAILVCENNHYGMGTATWRSAKSPAYFKRGDY--VPGLKVDGMDALAVKQACKFAKE 279
Query: 212 MAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWN 271
A+ G PI++E TYR H+ SD + YR DEI R +DP+ R RK + S+
Sbjct: 280 HALKNG-PIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLLLSH---- 334
Query: 272 GDI--ESELRSS---VRKQILHALQEAEKAEKPPISDLFTDVY 309
DI E EL+ + VRK++ A+ +A+ + P SDLF++VY
Sbjct: 335 -DIATEKELKDTEKEVRKEVDEAIAKAKDSPMPDPSDLFSNVY 376
>sp|P16387|ODPA_YEAST Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PDA1 PE=1 SV=2
Length = 420
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 154/321 (47%), Gaps = 25/321 (7%)
Query: 1 MYNDMVTLQTMDTIFYEAQRQGRI-SFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGV 59
MY DMV ++ M+ + +I F + G+EAI + AI D ++ YR G
Sbjct: 84 MYKDMVIIRRMEMACDALYKAKKIRGFCHLSVGQEAIAVGIENAITKLDSIITSYRCHGF 143
Query: 60 LLWRGFSMQEFANQCFGNKA--DYGKGRQM----PIHYGSNKHNYFTVSSTIATQLPHAV 113
RG S++ + G +A YGKG M P YG N + Q+P
Sbjct: 144 TFMRGASVKAVLAELMGRRAGVSYGKGGSMHLYAPGFYGGN--------GIVGAQVPLGA 195
Query: 114 GAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISD 173
G A+A + +DAC+ T +GDG +++G + N + + PV+F C NN + + T S
Sbjct: 196 GLAFAHQYKNEDACSFTLYGDGASNQGQVFESFNMAKLWNLPVVFCCENNKYGMGTAASR 255
Query: 174 QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHT 233
+G+ + ++V+G D LA+Y A A++ + P+++E TYR G H+
Sbjct: 256 SSAMTEYFKRGQY--IPGLKVNGMDILAVYQASKFAKDWCLSGKGPLVLEYETYRYGGHS 313
Query: 234 TSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRS---SVRKQILHAL 290
SD T YR DEI+ R+ DP+ + + G E+E+++ S RK + +
Sbjct: 314 MSDPGTTYRTRDEIQHMRSKNDPIAGLKMHLIDLGIAT---EAEVKAYDKSARKYVDEQV 370
Query: 291 QEAEKAEKP--PISDLFTDVY 309
+ A+ A P +S LF DVY
Sbjct: 371 ELADAAPPPEAKLSILFEDVY 391
>sp|Q654V6|ODPA2_ORYSJ Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os06g0246500 PE=2
SV=1
Length = 398
Score = 141 bits (356), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 139/278 (50%), Gaps = 3/278 (1%)
Query: 32 GEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHY 91
G+EA+ + AA D ++ YR+ L RG + + G + +G+ +H
Sbjct: 103 GQEAVAVGMEAATTRADAIITAYRDHCAYLARGGDLAALFAELMGRRGGCSRGKGGSMHL 162
Query: 92 GSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAV 151
N++ + Q+P G A+A + ++ A +GDG ++G ALN +A+
Sbjct: 163 YKKDANFYGGHGIVGAQVPLGCGLAFAQRYRKEAAVTFDLYGDGAANQGQLFEALNMAAL 222
Query: 152 TEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAARE 211
+ PV+ +C NN + + T ++ S R V ++VDG D LA+ A A++
Sbjct: 223 WKLPVVLVCENNHYGMGT--AEWRASKSPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKQ 280
Query: 212 MAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWN 271
A+ G PI++E TYR H+ SD + YR DEI R +DP+ R RK + ++ +
Sbjct: 281 HALENG-PIILEMDTYRYHGHSMSDPGSTYRTRDEIAGIRQERDPIERVRKLLLAHDFAT 339
Query: 272 GDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVY 309
++ +RKQ+ A+ +A+++ P S+LFT+VY
Sbjct: 340 TQELKDMEKEIRKQVDTAIAKAKESPMPDPSELFTNVY 377
>sp|O31404|ACOA_BACSU Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha
OS=Bacillus subtilis (strain 168) GN=acoA PE=2 SV=2
Length = 333
Score = 138 bits (347), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 141/312 (45%), Gaps = 8/312 (2%)
Query: 1 MYNDMVTLQTMDTIFYEAQRQGRI-SFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGV 59
MY M+ ++ + +E QG + F +GEEA+ + A + + D + +R G
Sbjct: 19 MYQKMLEIRGFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLHDGDSITSTHRGHGH 78
Query: 60 LLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYAL 119
+ +G + + FG KG+ +H + + A G+A
Sbjct: 79 CIAKGCDLDGMMAEIFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFTLACGSALTA 138
Query: 120 KMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDG 179
K + +V +FGDG ++G FH LN +AV PV+F+ NNG+ +TP D
Sbjct: 139 KYKQTKNVSVCFFGDGANNQGTFHEGLNLAAVWNLPVVFVAENNGYGEATPFEYASACDS 198
Query: 180 AVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDST 239
+ AY + + VDG D LA+Y A A E A G P LIE +TYR H D T
Sbjct: 199 IADRAAAYNMPGVTVDGKDILAVYQAAEEAIERARNGGGPSLIECMTYRNYGHFEGDAQT 258
Query: 240 KYRPVDEIEWWRTTQDPVTRFRKWI--ESNGWWNGDIESELRSSVRKQILHALQEAEKAE 297
Y+ DE +D + F+ ++ E++ DIE + S+ K A+ +E +
Sbjct: 259 -YKTKDERVEHLEEKDAIQGFKNYLLKETDANKLSDIEQRVSESIEK----AVSFSEDSP 313
Query: 298 KPPISDLFTDVY 309
P S+L TDVY
Sbjct: 314 YPKDSELLTDVY 325
>sp|O13366|ODPA_KLULA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PDA1 PE=3
SV=2
Length = 412
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 150/324 (46%), Gaps = 31/324 (9%)
Query: 1 MYNDMVTLQTMDTIFYEAQRQGRI-SFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGV 59
MY DM+ ++ M+ + +I F ++ G+EAI + AI D V+ YR G
Sbjct: 76 MYKDMIIVRRMEMACDALYKAKKIRGFCHSSVGQEAIAVGIENAITKRDTVITSYRCHGF 135
Query: 60 LLWRGFSMQEFANQCFGNK--ADYGKGRQM----PIHYGSNKHNYFTVSSTIATQLPHAV 113
RG ++Q + G + +GKG M P YG N + Q+P
Sbjct: 136 TYMRGAAVQAVLAELMGRRTGVSFGKGGSMHLYAPGFYGGN--------GIVGAQVPLGA 187
Query: 114 GAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI------ 167
G A+A + +DAC+ +GDG +++G + N + + P +F C NN + +
Sbjct: 188 GLAFAHQYKHEDACSFALYGDGASNQGQVFESFNMAKLWNLPAVFCCENNKYGMGTAAAR 247
Query: 168 STPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTY 227
S+ +++ F+ R + ++V+G D LA+Y A A++ + PI++E TY
Sbjct: 248 SSAMTEYFK--------RGQYIPGLKVNGMDILAVYQASKFAKDWTVSGNGPIVLEYETY 299
Query: 228 RVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQIL 287
R G H+ SD T YR DEI+ R+ DP+ + + G D + RK +
Sbjct: 300 RYGGHSMSDPGTTYRTRDEIQHMRSKNDPIAGLKMHLLELGIATEDEIKAYDKAARKYVD 359
Query: 288 HALQEAEKAEKP--PISDLFTDVY 309
++ A+ A P +S LF DVY
Sbjct: 360 EQVELADAAPAPEAKMSILFEDVY 383
>sp|A7MB35|ODPA_BOVIN Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Bos taurus GN=PDHA1 PE=2 SV=1
Length = 390
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 147/314 (46%), Gaps = 7/314 (2%)
Query: 2 YNDMVTLQTMDTIFYEAQRQGRI-SFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVL 60
Y M T++ M+ + +Q I F G+EA + A I D ++ YR G
Sbjct: 65 YRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFT 124
Query: 61 LWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALK 120
RG S++E + G + KG+ +H + N++ + + Q+P G A A K
Sbjct: 125 FTRGLSVREILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPLGAGIALACK 182
Query: 121 MDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGA 180
+ KD +T +GDG ++G A N +A+ + P IFIC NN + + T + S
Sbjct: 183 YNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDY 242
Query: 181 VVKGRAYGVRSIRVDGNDALAIYSAVH-AAREMAIGEGRPILIEALTYRVGHHTTSDDST 239
+G + +RVDG D L + A AA G+G PIL+E TYR H+ SD
Sbjct: 243 YKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKG-PILMELQTYRYHGHSMSDPGV 299
Query: 240 KYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKP 299
YR +EI+ R+ DP+ + + ++ + + E+ VRK+I A Q A +P
Sbjct: 300 SYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 359
Query: 300 PISDLFTDVYDVSP 313
P+ +L +Y P
Sbjct: 360 PLEELGYHIYCNDP 373
>sp|P52900|ODPA_SMIMA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
(Fragment) OS=Sminthopsis macroura GN=PDHA PE=2 SV=1
Length = 363
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 142/313 (45%), Gaps = 5/313 (1%)
Query: 2 YNDMVTLQTMDTIFYEAQRQGRI-SFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVL 60
Y M T++ M+ + +Q I F G+EA + A I D V+ YR G
Sbjct: 38 YKIMQTVRRMELKADQLYKQKIIRGFCHLYDGQEACCMGLEAGINPTDHVITAYRAHGFT 97
Query: 61 LWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALK 120
RG ++E + G + KG+ +H + N++ + + Q+P VG A A K
Sbjct: 98 YTRGLPVREILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPLGVGIALACK 155
Query: 121 MDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGA 180
+ KD +T +GDG ++G A N +A+ + P IFIC NN + + T + S
Sbjct: 156 YNEKDEICLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDY 215
Query: 181 VVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTK 240
+G + I VDG D L + A A P+L+E TYR H+ SD
Sbjct: 216 YKRGDF--IPGIMVDGMDVLCVREATKFAAAYCRSGKGPMLMELQTYRYHGHSMSDPGVS 273
Query: 241 YRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPP 300
YR +EI+ R+ DP+ + + +N + + E+ VRK+I A Q A +PP
Sbjct: 274 YRTREEIQEVRSKSDPIMLLKDRMVNNNLASIEELKEIDVEVRKEIEDAAQFATADPEPP 333
Query: 301 ISDLFTDVYDVSP 313
+ +L +Y P
Sbjct: 334 LEELGYHIYSRDP 346
>sp|Q9R9N5|ODPA_RHIME Pyruvate dehydrogenase E1 component subunit alpha OS=Rhizobium
meliloti (strain 1021) GN=pdhA PE=3 SV=1
Length = 348
Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 140/277 (50%), Gaps = 1/277 (0%)
Query: 32 GEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHY 91
G+EA+ + A+K D V+ YR+ G +L G S + + G + KG+ +H
Sbjct: 71 GQEAVVVGMQLALKEGDQVITGYRDHGHMLACGMSARGVMAELTGRRGGLSKGKGGSMHM 130
Query: 92 GSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAV 151
S + +++ + Q+ G A+A + D ++ YFGDG ++G + + N +A+
Sbjct: 131 FSKEKHFYGGHGIVGAQVSLGTGLAFANRYRGNDNVSLAYFGDGAANQGQVYESFNMAAL 190
Query: 152 TEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAARE 211
+ PVI+I NN +A+ T +S +G ++G+ +VDG D A+ +A A E
Sbjct: 191 WKLPVIYIVENNRYAMGTSVSRASAQTDFSQRGASFGIPGYQVDGMDVRAVKAAADEAVE 250
Query: 212 MAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWN 271
PI++E LTYR H+ SD + KYR DE++ R+ DP+ + + + GW
Sbjct: 251 HCRSGKGPIILEMLTYRYRGHSMSDPA-KYRSKDEVQKMRSEHDPIEQVKARLTDKGWAT 309
Query: 272 GDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDV 308
D ++ VR + + A+ +P +S+L+TD+
Sbjct: 310 EDELKQIDKEVRDIVADSADFAQSDPEPDVSELYTDI 346
>sp|O66112|ODPA_ZYMMO Pyruvate dehydrogenase E1 component subunit alpha OS=Zymomonas
mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
GN=pdhA PE=3 SV=1
Length = 354
Score = 135 bits (340), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 138/278 (49%), Gaps = 3/278 (1%)
Query: 32 GEEAINIASAAAIK-NDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIH 90
G+EA+ + AA++ D V+ YRE G +L G + + G + G+ +H
Sbjct: 74 GQEAVAVGLQAALQPGRDSVITGYREHGHMLAYGIDPKIVMAELTGRASGISHGKGGSMH 133
Query: 91 YGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSA 150
S +H +F + + Q+P G A+A K C+ YFGDG ++G + A N +A
Sbjct: 134 MFSTEHKFFGGNGIVGAQVPLGAGLAFAHKYRNDGGCSAAYFGDGSANQGQVYEAYNMAA 193
Query: 151 VTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAR 210
+ + PVIF+ NNG+A+ T I +G +G+ ++ VDG D L + A A
Sbjct: 194 LWKLPVIFVIENNGYAMGTSIQRANAHTALSERGAGFGIPALVVDGMDVLEVRGAATVAV 253
Query: 211 EMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWW 270
+ PI++E TYR H+ SD + +YR +E+ + DP+ +K + + G
Sbjct: 254 DWVQAGKGPIILEMKTYRYRGHSMSDPA-RYRSREEVNDMKENHDPLDNLKKDLFAAGVP 312
Query: 271 NGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDV 308
++ +L +R+Q+ A AEKA P +L+T++
Sbjct: 313 EAEL-VKLDEDIRQQVKEAADFAEKAPLPADEELYTNI 349
>sp|P52899|ODPA_CAEEL Probable pyruvate dehydrogenase E1 component subunit alpha,
mitochondrial OS=Caenorhabditis elegans GN=T05H10.6 PE=2
SV=1
Length = 397
Score = 135 bits (340), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 25/325 (7%)
Query: 2 YNDMVTLQTMDT----IFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREP 57
Y DM ++ M++ ++ E + +G Y SG+EA + AA+ D V+ YR
Sbjct: 59 YRDMQVIRRMESAAGNLYKEKKIRGFCHLY---SGQEACAVGMKAAMTEGDAVITAYRCH 115
Query: 58 GVLLWRGFSMQEFANQCFGNKAD--YGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGA 115
G G ++ E + G A +GKG M ++ N++ + + Q P G
Sbjct: 116 GWTWLLGATVTEVLAELTGRVAGNVHGKGGSMHMY----TKNFYGGNGIVGAQQPLGAGV 171
Query: 116 AYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIST-----P 170
A A+K + VT +GDG ++G A N + + + PV+F+C NNG+ + T
Sbjct: 172 ALAMKYREQKNVCVTLYGDGAANQGQLFEATNMAKLWDLPVLFVCENNGFGMGTTAERSS 231
Query: 171 ISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 230
S ++ + G V G I VDG D LA+ A A+E P+++E TYR
Sbjct: 232 ASTEYYTRGDYVPG-------IWVDGMDILAVREATKWAKEYCDSGKGPLMMEMATYRYH 284
Query: 231 HHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHAL 290
H+ SD T YR +EI+ R T+DP+T F+ I ++ + + VRK++ AL
Sbjct: 285 GHSMSDPGTSYRTREEIQEVRKTRDPITGFKDRIITSSLATEEELKAIDKEVRKEVDEAL 344
Query: 291 QEAEKAEKPPISDLFTDVYDVSPSN 315
+ A P L+ D+Y +P+
Sbjct: 345 KIATSDGVLPPEALYADIYHNTPAQ 369
>sp|Q54C70|ODPA_DICDI Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Dictyostelium discoideum GN=pdhA PE=1 SV=1
Length = 377
Score = 135 bits (339), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 148/310 (47%), Gaps = 5/310 (1%)
Query: 1 MYNDMVTLQTMDTIFYEAQRQGRI-SFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGV 59
+ +M + ++T+ ++ I F +G+EA+ +AI DD ++ YR+
Sbjct: 55 FFTEMSRFRRLETVCDGLYKKKLIRGFCHLYTGQEAVCAGLESAITKDDHIITAYRDHTY 114
Query: 60 LLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYAL 119
+L RG + +E + + KG+ +H + N++ + + Q P G A+A
Sbjct: 115 MLSRGATPEEIFAELLMKETGCSKGKGGSMHMFTK--NFYGGNGIVGAQCPLGAGIAFAQ 172
Query: 120 KMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDG 179
K ++ + +GDG ++G A N +++ + PVIFIC NN + + T S + + G
Sbjct: 173 KYNKTGNVCLAMYGDGAANQGQLFEAFNMASLWKLPVIFICENNKYGMGT--SQKRSTAG 230
Query: 180 AVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDST 239
R + V ++VDG D A+ A A E PI++E TYR H+ SD
Sbjct: 231 HDFYTRGHYVAGLKVDGMDVFAVKEAGKYAAEWCRAGNGPIILEMDTYRYVGHSMSDPGI 290
Query: 240 KYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKP 299
YR +E+ R T+DP+ R+ I N D + + +VR ++ A ++A A P
Sbjct: 291 TYRTREEVNHVRQTRDPIENIRQIILDNKIATEDQLAAIEETVRDEMEKASEKAIAAPLP 350
Query: 300 PISDLFTDVY 309
+LFT+VY
Sbjct: 351 QARELFTNVY 360
>sp|Q10489|ODPA_SCHPO Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pda1 PE=1 SV=1
Length = 409
Score = 134 bits (338), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 148/312 (47%), Gaps = 7/312 (2%)
Query: 1 MYNDMVTLQTMDTIFYEAQRQGRI-SFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGV 59
+Y MVT++ ++ + +I F + G+EA+ AI DD ++ YR G
Sbjct: 81 LYEKMVTIRRLELACDALYKAKKIRGFCHLSIGQEAVAAGIEGAITLDDSIITSYRCHGF 140
Query: 60 LLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYAL 119
RG S++ + G + KG+ +H + N++ + + Q+P G +A
Sbjct: 141 AYTRGLSIRSIIGELMGRQCGASKGKGGSMHIFAK--NFYGGNGIVGAQIPLGAGIGFAQ 198
Query: 120 KMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDG 179
K K +GDG +++G A N + + PVIF C NN + + T S + S
Sbjct: 199 KYLEKPTTTFALYGDGASNQGQAFEAFNMAKLWGLPVIFACENNKYGMGT--SAERSSAM 256
Query: 180 AVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDST 239
R + + V+G D LA+ A A++ + +P+L+E +TYR G H+ SD T
Sbjct: 257 TEFYKRGQYIPGLLVNGMDVLAVLQASKFAKKYTVENSQPLLMEFVTYRYGGHSMSDPGT 316
Query: 240 KYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKP 299
YR +E++ R +DP+ +K I G N + + +R + ++ AE++ P
Sbjct: 317 TYRSREEVQKVRAARDPIEGLKKHIMEWGVANANELKNIEKRIRGMVDEEVRIAEESPFP 376
Query: 300 -PISD-LFTDVY 309
PI + LF+DVY
Sbjct: 377 DPIEESLFSDVY 388
>sp|P51267|ODPA_PORPU Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra
purpurea GN=pdhA PE=3 SV=1
Length = 344
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 148/312 (47%), Gaps = 10/312 (3%)
Query: 1 MYNDMVTLQTMDTIFYEAQRQGRI-SFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGV 59
+Y DM+ + + + + +G++ F +G+EA++ + + D+V YR+
Sbjct: 27 LYEDMLLGRNFEDMCAQMYYKGKMFGFVHLYNGQEAVSTGVIKLLDSKDYVCSTYRDHVH 86
Query: 60 LLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAY-- 117
L +G Q + FG + +GR +H S HN+ + IA +P A GAA+
Sbjct: 87 ALSKGVPSQNVMAELFGKETGCSRGRGGSMHIFSAPHNFLGGFAFIAEGIPVATGAAFQS 146
Query: 118 -----ALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPIS 172
LK + +FGDG T+ G F LN + + + P+IF+ NN WAI
Sbjct: 147 IYRQQVLKEPGELRVTACFFGDGTTNNGQFFECLNMAVLWKLPIIFVVENNQWAIGMAHH 206
Query: 173 DQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHH 232
K A+G+ I VDG D LA+ A E A P LIEALTYR H
Sbjct: 207 RSSSIPEIHKKAEAFGLPGIEVDGMDVLAVRQVAEKAVERARQGQGPTLIEALTYRFRGH 266
Query: 233 TTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQE 292
+ +D + R E E W +DP+ + +K I N + D ++++SSV+ + +++
Sbjct: 267 SLADPD-ELRSRQEKEAW-VARDPIKKLKKHILDNQIASSDELNDIQSSVKIDLEQSVEF 324
Query: 293 AEKAEKPPISDL 304
A + +P IS+L
Sbjct: 325 AMSSPEPNISEL 336
>sp|P35486|ODPA_MOUSE Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Mus musculus GN=Pdha1 PE=1 SV=1
Length = 390
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 145/314 (46%), Gaps = 7/314 (2%)
Query: 2 YNDMVTLQTMDTIFYEAQRQGRI-SFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVL 60
Y M T++ M+ + +Q I F G+EA + A I D ++ YR G
Sbjct: 65 YRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFT 124
Query: 61 LWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALK 120
RG ++ + G + KG+ +H + N++ + + Q+P G A A K
Sbjct: 125 FTRGLPVRAILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPLGAGIALACK 182
Query: 121 MDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGA 180
+ KD +T +GDG ++G A N +A+ + P IFIC NN + + T + S
Sbjct: 183 YNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDY 242
Query: 181 VVKGRAYGVRSIRVDGNDALAIYSAVH-AAREMAIGEGRPILIEALTYRVGHHTTSDDST 239
+G + +RVDG D L + A AA G+G PIL+E TYR H+ SD
Sbjct: 243 YKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKG-PILMELQTYRYHGHSMSDPGV 299
Query: 240 KYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKP 299
YR +EI+ R+ DP+ + + ++ + + E+ VRK+I A Q A +P
Sbjct: 300 SYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 359
Query: 300 PISDLFTDVYDVSP 313
P+ +L +Y P
Sbjct: 360 PLEELGYHIYSSDP 373
>sp|Q1XDM0|ODPA_PORYE Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra
yezoensis GN=pdhA PE=3 SV=1
Length = 346
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 148/312 (47%), Gaps = 10/312 (3%)
Query: 1 MYNDMVTLQTMDTIFYEAQRQGRI-SFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGV 59
+Y DM+ + + + + +G++ F +G+EA++ + D+V YR+
Sbjct: 29 LYEDMLLGRNFEDMCAQMYYKGKMFGFVHLYNGQEAVSTGVIKLLNPTDYVCSTYRDHVH 88
Query: 60 LLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAY-- 117
L +G + + FG + KGR +H S HN+ + IA +P A GAA+
Sbjct: 89 ALSKGVPSKNVMAELFGKETGCSKGRGGSMHIFSAPHNFLGGFAFIAEGIPVATGAAFQS 148
Query: 118 -----ALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPIS 172
LK +FGDG T+ G F LN + + + P+IF+ NN WAI
Sbjct: 149 IYRQQVLKETEDLRVTACFFGDGTTNNGQFFECLNMAVLWKLPIIFVVENNQWAIGMAHH 208
Query: 173 DQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHH 232
K A+G+ I VDG D LA+ A A + A P LIEALTYR H
Sbjct: 209 RSSSIPEIHKKAEAFGLPGIEVDGMDVLAVRQAAKQAVQRARQGDGPTLIEALTYRFRGH 268
Query: 233 TTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQE 292
+ +D + R E E W +DP+ + +K+I N N +E++++V+ ++ A++
Sbjct: 269 SLADPD-ELRSRQEKEAW-VARDPIKKLKKYILDNEIANIGELNEIQNAVKTELEQAVKF 326
Query: 293 AEKAEKPPISDL 304
A + +P +S+L
Sbjct: 327 AISSPEPNMSEL 338
>sp|P26284|ODPA_RAT Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Rattus norvegicus GN=Pdha1 PE=1 SV=2
Length = 390
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 146/314 (46%), Gaps = 7/314 (2%)
Query: 2 YNDMVTLQTMDTIFYEAQRQGRI-SFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVL 60
Y M T++ M+ + +Q I F G+EA + A I D ++ YR G
Sbjct: 65 YRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFT 124
Query: 61 LWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALK 120
RG +++ + G + KG+ +H + N++ + + Q+P G A A K
Sbjct: 125 FNRGHAVRAILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPLGAGIALACK 182
Query: 121 MDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGA 180
+ KD +T +GDG ++G A N +A+ + P IFIC NN + + T + S
Sbjct: 183 YNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDY 242
Query: 181 VVKGRAYGVRSIRVDGNDALAIYSAVH-AAREMAIGEGRPILIEALTYRVGHHTTSDDST 239
+G + +RVDG D L + A AA G+G PIL+E TYR H+ SD
Sbjct: 243 YKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKG-PILMELQTYRYHGHSMSDPGV 299
Query: 240 KYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKP 299
YR +EI+ R+ DP+ + + ++ + + E+ VRK+I A Q A +P
Sbjct: 300 SYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 359
Query: 300 PISDLFTDVYDVSP 313
P+ +L +Y P
Sbjct: 360 PLEELGYHIYSSDP 373
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,265,802
Number of Sequences: 539616
Number of extensions: 5499889
Number of successful extensions: 15248
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 146
Number of HSP's that attempted gapping in prelim test: 14905
Number of HSP's gapped (non-prelim): 364
length of query: 340
length of database: 191,569,459
effective HSP length: 118
effective length of query: 222
effective length of database: 127,894,771
effective search space: 28392639162
effective search space used: 28392639162
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)