Query 019498
Match_columns 340
No_of_seqs 286 out of 2435
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 17:02:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019498.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019498hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bfd_A 2-oxoisovalerate dehydr 100.0 1.1E-76 3.8E-81 579.9 36.0 339 1-339 60-398 (400)
2 1qs0_A 2-oxoisovalerate dehydr 100.0 5.7E-76 2E-80 575.1 35.5 321 1-322 79-406 (407)
3 2ozl_A PDHE1-A type I, pyruvat 100.0 3.2E-74 1.1E-78 555.8 36.6 310 1-314 39-349 (365)
4 1w85_A Pyruvate dehydrogenase 100.0 3.3E-74 1.1E-78 556.9 36.5 318 1-328 49-367 (368)
5 1umd_A E1-alpha, 2-OXO acid de 100.0 2.1E-71 7.2E-76 538.1 37.3 325 1-326 41-366 (367)
6 2yic_A 2-oxoglutarate decarbox 100.0 1.2E-58 4.1E-63 487.4 22.3 334 1-339 123-500 (868)
7 2xt6_A 2-oxoglutarate decarbox 100.0 1.1E-57 3.7E-62 490.6 23.8 334 1-339 368-745 (1113)
8 2jgd_A 2-oxoglutarate dehydrog 100.0 1.9E-56 6.5E-61 473.1 22.9 334 1-338 203-572 (933)
9 2e6k_A Transketolase; structur 100.0 6.3E-33 2.1E-37 286.4 16.3 198 48-258 62-282 (651)
10 1gpu_A Transketolase; transfer 100.0 1.2E-31 4E-36 278.0 24.6 200 47-257 60-281 (680)
11 3rim_A Transketolase, TK; TPP, 100.0 1E-30 3.6E-35 270.1 23.1 181 47-237 76-278 (700)
12 1r9j_A Transketolase; domains, 100.0 6.8E-30 2.3E-34 264.4 29.0 195 48-252 60-277 (673)
13 2o1s_A 1-deoxy-D-xylulose-5-ph 100.0 7.2E-31 2.5E-35 270.0 19.0 199 24-235 47-291 (621)
14 3mos_A Transketolase, TK; thia 100.0 1.9E-30 6.4E-35 266.1 19.7 182 47-240 66-254 (616)
15 3kom_A Transketolase; rossmann 100.0 2E-29 6.9E-34 259.9 20.9 193 47-249 59-274 (663)
16 3uk1_A Transketolase; structur 100.0 3.8E-29 1.3E-33 259.0 23.0 193 47-250 98-313 (711)
17 3l84_A Transketolase; TKT, str 100.0 9.5E-29 3.3E-33 253.4 25.3 182 46-238 57-252 (632)
18 1itz_A Transketolase; calvin c 100.0 6.8E-29 2.3E-33 257.1 23.8 195 47-251 69-288 (675)
19 2r8o_A Transketolase 1, TK 1; 100.0 3.7E-29 1.3E-33 259.0 21.3 196 47-252 57-275 (669)
20 3m49_A Transketolase; alpha-be 100.0 1.7E-28 5.9E-33 253.6 26.3 195 46-250 82-299 (690)
21 2o1x_A 1-deoxy-D-xylulose-5-ph 100.0 6.6E-29 2.3E-33 255.7 15.5 197 24-234 49-295 (629)
22 2qtc_A Pyruvate dehydrogenase 99.9 2.1E-26 7.3E-31 243.0 21.6 200 46-252 133-422 (886)
23 4feg_A Pyruvate oxidase; carba 99.9 5.3E-25 1.8E-29 225.7 11.5 163 102-275 419-597 (603)
24 3ahc_A Phosphoketolase, xylulo 99.8 2E-19 6.8E-24 187.4 14.4 140 87-230 159-322 (845)
25 1v5e_A Pyruvate oxidase; oxido 99.7 9.9E-18 3.4E-22 171.3 12.0 157 65-230 364-541 (590)
26 2pan_A Glyoxylate carboligase; 99.7 7.3E-18 2.5E-22 173.1 8.9 121 102-230 441-582 (616)
27 2uz1_A Benzaldehyde lyase; thi 99.7 1.6E-17 5.6E-22 168.7 9.0 117 102-228 418-546 (563)
28 1ozh_A ALS, acetolactate synth 99.7 1.6E-17 5.4E-22 169.0 8.6 116 102-229 419-544 (566)
29 1q6z_A BFD, BFDC, benzoylforma 99.7 1.4E-17 4.9E-22 167.9 8.0 115 102-228 400-525 (528)
30 2vk8_A Pyruvate decarboxylase 99.7 1.1E-17 3.9E-22 169.9 6.9 120 102-228 412-542 (563)
31 2pgn_A Cyclohexane-1,2-dione h 99.7 3.4E-17 1.2E-21 167.3 9.7 156 65-232 375-551 (589)
32 1t9b_A Acetolactate synthase, 99.7 3.7E-17 1.3E-21 169.5 9.9 117 102-230 512-639 (677)
33 2iht_A Carboxyethylarginine sy 99.7 2.4E-17 8.3E-22 167.8 8.3 115 102-228 435-561 (573)
34 3eya_A Pyruvate dehydrogenase 99.7 8.1E-17 2.8E-21 163.2 10.3 118 101-230 404-531 (549)
35 1ybh_A Acetolactate synthase, 99.7 1.1E-16 3.6E-21 163.7 10.7 118 102-231 425-561 (590)
36 2vbi_A Pyruvate decarboxylase; 99.7 6.6E-17 2.3E-21 164.3 9.0 115 102-228 408-533 (566)
37 2vbf_A Branched-chain alpha-ke 99.7 8.6E-17 2.9E-21 163.6 9.7 117 101-228 423-551 (570)
38 2nxw_A Phenyl-3-pyruvate decar 99.7 5.7E-17 1.9E-21 164.9 8.1 115 102-228 421-542 (565)
39 1ovm_A Indole-3-pyruvate decar 99.7 6.9E-17 2.4E-21 163.7 8.4 115 102-228 407-532 (552)
40 2wvg_A PDC, pyruvate decarboxy 99.7 1.2E-16 4.2E-21 162.4 9.7 153 65-228 365-541 (568)
41 2c31_A Oxalyl-COA decarboxylas 99.7 1.8E-16 6.2E-21 161.2 10.6 116 101-229 424-548 (568)
42 2q28_A Oxalyl-COA decarboxylas 99.7 2.4E-16 8.2E-21 160.1 10.6 117 101-230 419-546 (564)
43 3hww_A 2-succinyl-5-enolpyruvy 99.6 9.8E-16 3.4E-20 155.4 7.4 150 65-228 367-539 (556)
44 2x7j_A 2-succinyl-5-enolpyruvy 99.6 4.7E-16 1.6E-20 159.3 4.6 119 97-228 447-580 (604)
45 3lq1_A 2-succinyl-5-enolpyruvy 99.6 2.1E-15 7.3E-20 153.7 5.8 118 98-229 429-561 (578)
46 2c42_A Pyruvate-ferredoxin oxi 99.1 5.1E-10 1.7E-14 122.3 11.9 99 125-229 953-1071(1231)
47 2pgn_A Cyclohexane-1,2-dione h 94.8 0.19 6.5E-06 50.7 11.8 107 109-226 56-164 (589)
48 1ybh_A Acetolactate synthase, 94.8 0.1 3.5E-06 52.7 9.6 108 109-226 63-171 (590)
49 2iht_A Carboxyethylarginine sy 94.8 0.11 3.7E-06 52.3 9.7 109 109-226 61-170 (573)
50 2uz1_A Benzaldehyde lyase; thi 94.7 0.13 4.4E-06 51.6 10.1 109 109-227 54-164 (563)
51 1ozh_A ALS, acetolactate synth 94.5 0.11 3.9E-06 52.0 9.2 108 109-226 61-169 (566)
52 3eya_A Pyruvate dehydrogenase 94.2 0.16 5.4E-06 50.8 9.5 108 109-226 54-161 (549)
53 2vbi_A Pyruvate decarboxylase; 94.2 0.17 6E-06 50.6 9.7 110 108-226 53-168 (566)
54 2wvg_A PDC, pyruvate decarboxy 94.2 0.21 7.1E-06 50.1 10.3 109 109-226 54-168 (568)
55 1yd7_A 2-keto acid:ferredoxin 94.1 0.067 2.3E-06 51.4 6.2 114 107-233 75-192 (395)
56 1t9b_A Acetolactate synthase, 94.0 0.18 6.2E-06 51.8 9.5 108 108-225 132-240 (677)
57 2o1s_A 1-deoxy-D-xylulose-5-ph 93.7 0.24 8.3E-06 50.4 9.7 103 108-224 373-476 (621)
58 4feg_A Pyruvate oxidase; carba 93.7 0.17 5.6E-06 51.3 8.5 107 109-225 63-169 (603)
59 2nxw_A Phenyl-3-pyruvate decar 93.5 0.19 6.5E-06 50.4 8.6 110 109-226 72-185 (565)
60 2q28_A Oxalyl-COA decarboxylas 93.5 0.18 6.2E-06 50.5 8.4 110 109-226 58-168 (564)
61 2c31_A Oxalyl-COA decarboxylas 93.3 0.19 6.5E-06 50.4 8.1 110 109-226 60-170 (568)
62 1v5e_A Pyruvate oxidase; oxido 93.3 0.18 6.2E-06 50.8 8.0 108 107-225 54-162 (590)
63 3mos_A Transketolase, TK; thia 93.2 0.47 1.6E-05 48.2 10.9 100 109-223 368-469 (616)
64 2o1x_A 1-deoxy-D-xylulose-5-ph 92.4 0.3 1E-05 49.7 8.3 103 108-225 376-479 (629)
65 2pan_A Glyoxylate carboligase; 92.4 0.58 2E-05 47.3 10.4 109 109-226 78-187 (616)
66 2r8o_A Transketolase 1, TK 1; 92.3 0.87 3E-05 46.7 11.5 101 109-223 415-517 (669)
67 2x7j_A 2-succinyl-5-enolpyruvy 92.2 0.29 9.9E-06 49.5 7.8 108 109-226 82-197 (604)
68 2e6k_A Transketolase; structur 92.1 0.77 2.6E-05 46.9 10.8 102 109-224 410-513 (651)
69 1qs0_B 2-oxoisovalerate dehydr 92.0 0.45 1.5E-05 44.5 8.3 101 107-224 63-173 (338)
70 1itz_A Transketolase; calvin c 91.9 0.9 3.1E-05 46.7 11.1 102 109-224 427-531 (675)
71 1q6z_A BFD, BFDC, benzoylforma 91.8 0.33 1.1E-05 48.1 7.5 112 106-226 48-160 (528)
72 3kom_A Transketolase; rossmann 91.7 0.92 3.2E-05 46.5 10.8 102 108-223 415-518 (663)
73 3lq1_A 2-succinyl-5-enolpyruvy 91.3 0.47 1.6E-05 47.6 8.2 110 109-226 62-177 (578)
74 2ozl_B PDHE1-B, pyruvate dehyd 91.3 0.66 2.3E-05 43.5 8.6 100 107-225 73-184 (341)
75 1gpu_A Transketolase; transfer 91.1 0.92 3.1E-05 46.6 10.2 101 109-223 422-525 (680)
76 3l84_A Transketolase; TKT, str 90.9 1.2 4.2E-05 45.3 10.8 102 108-224 394-497 (632)
77 2vbf_A Branched-chain alpha-ke 90.5 0.8 2.7E-05 45.8 8.9 110 107-226 74-189 (570)
78 1r9j_A Transketolase; domains, 90.1 1.5 5E-05 45.0 10.6 102 109-224 415-518 (673)
79 2vk8_A Pyruvate decarboxylase 90.0 0.59 2E-05 46.6 7.5 109 109-226 55-169 (563)
80 1umd_B E1-beta, 2-OXO acid deh 89.9 1.7 5.9E-05 40.2 10.1 99 107-223 62-171 (324)
81 1ik6_A Pyruvate dehydrogenase; 89.4 1.3 4.4E-05 42.0 9.0 99 107-223 109-218 (369)
82 3m49_A Transketolase; alpha-be 89.4 1.7 5.8E-05 44.8 10.3 102 108-223 439-542 (690)
83 1w85_B Pyruvate dehydrogenase 89.0 1.2 4.2E-05 41.2 8.4 99 107-223 61-170 (324)
84 1ovm_A Indole-3-pyruvate decar 88.1 1.1 3.7E-05 44.6 7.7 109 108-226 55-169 (552)
85 2bfd_B 2-oxoisovalerate dehydr 87.5 1.5 5.1E-05 41.1 7.9 101 107-224 78-189 (342)
86 3uk1_A Transketolase; structur 86.6 3.8 0.00013 42.3 10.9 100 109-223 461-562 (711)
87 3rim_A Transketolase, TK; TPP, 84.9 4 0.00014 42.0 10.1 101 109-223 445-549 (700)
88 3hww_A 2-succinyl-5-enolpyruvy 84.5 2 7E-05 42.7 7.6 108 109-226 59-170 (556)
89 2c42_A Pyruvate-ferredoxin oxi 84.4 4.1 0.00014 44.7 10.4 113 108-233 66-178 (1231)
90 3ibs_A Conserved hypothetical 78.5 8.8 0.0003 32.3 8.6 71 125-195 111-196 (218)
91 2jgd_A 2-oxoglutarate dehydrog 71.2 10 0.00036 40.3 8.3 105 107-222 663-775 (933)
92 2yic_A 2-oxoglutarate decarbox 68.9 15 0.00053 38.6 9.0 107 107-222 595-707 (868)
93 1use_A VAsp, vasodilator-stimu 66.1 24 0.0008 22.8 6.4 26 270-295 4-29 (45)
94 2xt6_A 2-oxoglutarate decarbox 63.4 22 0.00076 38.5 9.1 107 107-222 840-952 (1113)
95 2zzd_B Thiocyanate hydrolase s 59.7 13 0.00046 30.7 5.2 31 258-288 114-144 (157)
96 4hhu_A OR280; engineered prote 55.6 15 0.0005 28.9 4.4 36 185-220 80-115 (170)
97 4hhu_A OR280; engineered prote 47.9 25 0.00087 27.5 4.7 33 188-220 2-34 (170)
98 3hbm_A UDP-sugar hydrolase; PS 45.7 45 0.0015 29.9 6.9 34 129-163 3-38 (282)
99 1abz_A Alpha-T-alpha, ATA; de 41.7 23 0.00077 21.3 2.7 27 261-287 12-38 (40)
100 1pyo_A Caspase-2; apoptosis, c 39.8 61 0.0021 26.8 6.2 49 178-226 61-109 (167)
101 2w84_A Peroxisomal membrane pr 38.6 39 0.0013 23.9 4.0 24 254-278 32-55 (70)
102 2kl8_A OR15; structural genomi 37.3 42 0.0014 23.3 3.9 29 192-220 5-33 (85)
103 3ff5_A PEX14P, peroxisomal bio 36.5 44 0.0015 22.4 3.8 25 254-279 27-51 (54)
104 1m3s_A Hypothetical protein YC 36.1 72 0.0025 25.9 6.3 35 125-161 80-114 (186)
105 1jeo_A MJ1247, hypothetical pr 36.1 96 0.0033 24.9 7.0 38 123-162 81-118 (180)
106 2e62_A Protein AT5G25060; CWF2 35.0 67 0.0023 22.0 4.6 33 257-289 25-57 (61)
107 3c5c_A RAS-like protein 12; GD 34.9 1.5E+02 0.005 23.7 8.0 58 152-213 126-184 (187)
108 2xhz_A KDSD, YRBH, arabinose 5 33.4 99 0.0034 24.9 6.6 17 180-196 115-131 (183)
109 3etn_A Putative phosphosugar i 32.1 86 0.003 26.6 6.3 18 179-196 124-143 (220)
110 3av3_A Phosphoribosylglycinami 31.8 61 0.0021 27.7 5.2 82 126-227 5-91 (212)
111 3sho_A Transcriptional regulat 31.6 1.1E+02 0.0036 24.8 6.6 79 105-198 45-124 (187)
112 4ds3_A Phosphoribosylglycinami 30.8 48 0.0016 28.5 4.3 82 125-227 8-95 (209)
113 3kcq_A Phosphoribosylglycinami 30.4 60 0.0021 28.0 4.9 56 124-196 8-66 (215)
114 3t5g_A GTP-binding protein RHE 30.4 1.7E+02 0.0059 22.8 7.6 61 152-216 110-170 (181)
115 3tqr_A Phosphoribosylglycinami 30.3 69 0.0024 27.6 5.2 82 125-227 6-92 (215)
116 3o1l_A Formyltetrahydrofolate 30.0 1.5E+02 0.0052 26.9 7.7 53 124-195 105-160 (302)
117 2h54_A Caspase-1; allosteric s 30.0 79 0.0027 26.3 5.4 56 155-210 44-100 (178)
118 3ghf_A Septum site-determining 30.0 77 0.0026 24.6 5.0 47 180-226 8-56 (120)
119 3hyn_A Putative signal transdu 30.0 56 0.0019 27.7 4.4 42 119-162 75-118 (189)
120 2x5n_A SPRPN10, 26S proteasome 29.6 60 0.002 27.2 4.7 32 128-159 110-141 (192)
121 2elf_A Protein translation elo 29.2 1.3E+02 0.0044 27.9 7.4 85 124-211 84-179 (370)
122 3da8_A Probable 5'-phosphoribo 29.0 84 0.0029 27.1 5.6 80 126-227 14-98 (215)
123 1ugp_A NitrIle hydratase alpha 28.7 91 0.0031 26.5 5.4 29 257-285 20-48 (203)
124 2p1h_A APAF-1, apoptotic prote 28.1 35 0.0012 24.9 2.6 25 257-281 24-48 (94)
125 3qyh_A CO-type nitrIle hydrata 27.7 79 0.0027 27.4 5.0 27 257-283 40-66 (226)
126 1n3y_A Integrin alpha-X; alpha 27.5 83 0.0028 25.5 5.2 79 125-211 110-191 (198)
127 3oes_A GTPase rhebl1; small GT 26.9 2.4E+02 0.0084 22.5 8.6 58 153-214 129-186 (201)
128 3n0v_A Formyltetrahydrofolate 26.8 1.8E+02 0.0061 26.1 7.6 53 124-195 90-145 (286)
129 3fxa_A SIS domain protein; str 26.5 75 0.0026 26.2 4.8 19 179-197 110-128 (201)
130 3m3h_A OPRT, oprtase, orotate 26.4 2.2E+02 0.0074 24.7 7.8 143 109-280 70-221 (234)
131 1meo_A Phosophoribosylglycinam 26.3 3E+02 0.01 23.3 9.2 81 126-227 2-88 (209)
132 4fm4_A NitrIle hydratase alpha 26.1 1E+02 0.0034 26.4 5.3 27 257-283 13-39 (209)
133 3lou_A Formyltetrahydrofolate 26.0 1.1E+02 0.0037 27.7 5.9 53 124-195 95-150 (292)
134 2bln_A Protein YFBG; transfera 26.0 72 0.0025 28.9 4.8 82 129-227 3-84 (305)
135 3a8g_A NitrIle hydratase subun 25.1 82 0.0028 27.0 4.5 28 258-285 24-51 (207)
136 1m72_A Caspase-1; caspase, cys 24.9 76 0.0026 28.3 4.7 33 178-210 59-91 (272)
137 2ywr_A Phosphoribosylglycinami 24.8 1.1E+02 0.0036 26.2 5.5 82 126-227 3-89 (216)
138 1g6u_A Domain swapped dimer; d 24.8 91 0.0031 19.4 3.5 22 262-284 10-31 (48)
139 1nw9_B Caspase 9, apoptosis-re 24.6 1.2E+02 0.0042 26.9 6.0 47 178-225 49-95 (277)
140 2dko_A Caspase-3; low barrier 24.3 1.1E+02 0.0036 24.6 5.0 48 178-226 44-91 (146)
141 1vim_A Hypothetical protein AF 24.2 1.3E+02 0.0044 24.9 5.8 19 179-197 107-125 (200)
142 1qtn_A Caspase-8; apoptosis, d 23.8 1.5E+02 0.0053 24.1 6.1 48 178-226 58-105 (164)
143 3hht_B NitrIle hydratase beta 23.7 1.6E+02 0.0054 25.7 6.3 29 247-281 73-101 (229)
144 3hht_A NitrIle hydratase alpha 23.2 1.1E+02 0.0036 26.5 4.9 27 257-283 29-55 (216)
145 1pvv_A Otcase, ornithine carba 22.7 1.9E+02 0.0065 26.4 7.0 61 125-200 154-218 (315)
146 4fx5_A VON willebrand factor t 22.1 4.9E+02 0.017 24.7 10.3 78 126-215 180-259 (464)
147 4aec_A Cysteine synthase, mito 21.9 2.6E+02 0.0088 26.6 8.0 66 141-220 185-251 (430)
148 1kao_A RAP2A; GTP-binding prot 21.8 2.6E+02 0.0088 21.0 7.6 57 152-212 107-163 (167)
149 3con_A GTPase NRAS; structural 21.7 1.7E+02 0.0058 23.1 6.0 54 152-210 125-181 (190)
150 3q85_A GTP-binding protein REM 21.6 1.6E+02 0.0055 22.5 5.7 54 153-210 109-165 (169)
151 2nn3_C Caspase-1; cysteine pro 21.5 1.4E+02 0.0046 27.3 5.7 56 156-211 62-120 (310)
152 1ml4_A Aspartate transcarbamoy 21.2 1.4E+02 0.0048 27.2 5.7 79 109-200 136-216 (308)
153 3cf4_G Acetyl-COA decarboxylas 21.1 74 0.0025 25.9 3.6 34 125-158 34-67 (170)
154 3ljc_A ATP-dependent protease 20.8 2.3E+02 0.0079 24.5 7.0 68 243-329 183-250 (252)
155 3od5_A Caspase-6; caspase doma 20.8 1.3E+02 0.0045 26.7 5.4 55 156-210 23-81 (278)
156 2o3a_A UPF0106 protein AF_0751 20.8 1.1E+02 0.0039 25.4 4.5 41 179-223 23-63 (178)
157 3tbh_A O-acetyl serine sulfhyd 20.6 3.3E+02 0.011 24.5 8.3 46 140-197 81-127 (334)
158 1tk9_A Phosphoheptose isomeras 20.4 1.1E+02 0.0037 24.7 4.5 40 122-163 108-147 (188)
159 3p45_A Caspase-6; protease, hu 20.4 1.2E+02 0.0042 25.3 4.8 48 178-226 72-119 (179)
160 4ekn_B Aspartate carbamoyltran 20.3 2.1E+02 0.007 26.0 6.7 61 124-195 149-210 (306)
161 3sir_A Caspase; hydrolase; 2.6 20.3 2.6E+02 0.0089 24.5 7.2 55 156-210 22-79 (259)
162 2khz_A C-MYC-responsive protei 20.1 1E+02 0.0036 25.0 4.3 35 126-163 79-113 (165)
163 3p9x_A Phosphoribosylglycinami 20.1 4E+02 0.014 22.6 8.7 81 126-227 4-90 (211)
164 2pqm_A Cysteine synthase; OASS 20.1 4.8E+02 0.016 23.5 10.8 42 144-197 91-133 (343)
165 3h11_A CAsp8 and FADD-like apo 20.0 2.4E+02 0.0081 25.1 6.9 50 177-226 56-105 (272)
No 1
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ...
Probab=100.00 E-value=1.1e-76 Score=579.94 Aligned_cols=339 Identities=49% Similarity=0.909 Sum_probs=307.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHcCCccccccCCchHHHHHHHHHccCCCcEEEccCccHHHHHHcCCCHHHHHHHhhcCCCC
Q 019498 1 MYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKAD 80 (340)
Q Consensus 1 ~y~~M~~~R~~e~~~~~~~~~g~~~~~~~~~G~Ea~~~~~~~al~~~D~~~~~yR~~~~~l~~G~~~~~~~~~~~~~~~~ 80 (340)
+|+.|+++|.||+++..+++||+++|++++.||||+++|++.+|++.|+++++||+|++++.+|+++.++|.+++++.++
T Consensus 60 ~y~~M~~~r~fe~~~~~~~~~gri~~~~~~~GqEa~~vg~~~al~~~D~v~~~yR~~~~~~~~G~~~~~~l~e~~g~~~g 139 (400)
T 2bfd_A 60 LYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQAREAGVLMYRDYPLELFMAQCYGNISD 139 (400)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSSCCCCCTTCHHHHHHHHHTSCTTSEEECCSCCHHHHHHTTCCHHHHHHHHHTCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcceeecCCChHHHHHHHHHhcCCCCEEEecCcCHHHHHHcCCCHHHHHHHhcCCCCC
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCccccccCCCCCCccccCccccchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEE
Q 019498 81 YGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC 160 (340)
Q Consensus 81 ~~~G~~~~~h~~~~~~~~~~~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv 160 (340)
+++|+++++|+.....++..++|+||+++|+|+|+|+|.++.+++++|||++|||++++|.+||+|++|++|+||+||||
T Consensus 140 ~~~G~~~~~H~~~~~~~~~~~~g~lG~~lp~AvG~AlA~~~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vv 219 (400)
T 2bfd_A 140 LGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFC 219 (400)
T ss_dssp TTTTCSCSSCCCBTTTTBCCCCSSTTTHHHHHHHHHHHHHHHTCCCCEEEEEETTGGGSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCCCCCcCCcccccCccccCccccccccHHHHHHHhhhhhCCCCeEEEEECchhhhcChHHHHHHHHHHHCcCEEEEE
Confidence 88899999999887778888899999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCccccccccCccCccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEecCCCCCCCCCCCC
Q 019498 161 RNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTK 240 (340)
Q Consensus 161 ~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~~gHs~~dd~~~ 240 (340)
+||+|+++++.....+.++++++|++|||++++|||+|+++|++|+++|++++|++++|+|||++|||.+|||++|+|..
T Consensus 220 ~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~av~~a~~~A~~~ar~~~~P~lIe~~tyR~~gHs~~D~~~~ 299 (400)
T 2bfd_A 220 RNNGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHASTSDDSSA 299 (400)
T ss_dssp EECSEETTEEGGGTCSSSTTGGGTGGGTCEEEEEETTCHHHHHHHHHHHHHHHHHHTCCEEEEEECCCCC--CC------
T ss_pred ECCceeeeecccccCCCCCHHHHHHHcCCcEEEEeCCCHHHHHHHHHHHHHHHHhCCCCEEEEEEeeeeCCCCCCCCCcc
Confidence 99999999988877777899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHhCCChHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccccccccccCCCccHHHHH
Q 019498 241 YRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVYDVSPSNLREQE 320 (340)
Q Consensus 241 Yr~~~e~~~~~~~~dpi~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~p~~~~~~~~v~~~~~~~~~~~~ 320 (340)
||+++|++.|++..|||.+++++|++.|++|++++++++++++++|++++++|++.|.|+++++|++||++.++.+.+|+
T Consensus 300 Yr~~~e~~~~~~~~dPl~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~~~p~~~~~~~~vy~~~~~~l~~q~ 379 (400)
T 2bfd_A 300 FRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQLRKQQ 379 (400)
T ss_dssp -------------CCHHHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHSCBCCGGGGSTTSSSSCCHHHHHHH
T ss_pred CCCHHHHHHHHhcCCHHHHHHHHHHHCCCCChHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhccCCHHHHHHH
Confidence 99999999998545899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCC
Q 019498 321 HSLRETIKKHPQDYPSNVP 339 (340)
Q Consensus 321 ~~l~~~~~~~p~~~~~~~~ 339 (340)
+.|.+.+.++|++|+++.|
T Consensus 380 ~~~~~~~~~~~~~~~~~~~ 398 (400)
T 2bfd_A 380 ESLARHLQTYGEHYPLDHF 398 (400)
T ss_dssp HHHHHHHHHHGGGSCGGGB
T ss_pred HHHHHHHHhCCCcCCcccc
Confidence 9999999999999998764
No 2
>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A
Probab=100.00 E-value=5.7e-76 Score=575.09 Aligned_cols=321 Identities=38% Similarity=0.584 Sum_probs=308.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHcCCccccccCCchHHHHHHHHHccCCCcEEEccCccHHHHHHcCCCHHHHHHHhhcCCCC
Q 019498 1 MYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKAD 80 (340)
Q Consensus 1 ~y~~M~~~R~~e~~~~~~~~~g~~~~~~~~~G~Ea~~~~~~~al~~~D~~~~~yR~~~~~l~~G~~~~~~~~~~~~~~~~ 80 (340)
+|+.|+++|.||+++..+++||+++|+|++.||||+++|++.+|++.|+++++||+|++++.+|+++.++|++++++..+
T Consensus 79 ~y~~M~~~R~fe~~~~~~~~qgr~~~~~~~~GqEA~~vg~~~al~~~D~v~~~yR~~~~~l~~g~~~~~i~~el~g~~~~ 158 (407)
T 1qs0_A 79 GMRAMLKTRIFDSRMVVAQRQKKMSFYMQSLGEEAIGSGQALALNRTDMCFPTYRQQSILMARDVSLVEMICQLLSNERD 158 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSSCCCCCTTTHHHHHHHHHHSCTTSEEECCSSCHHHHHHTTCCHHHHHHHHHTCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccCcCCCChHHHHHHHHHhcCCCCEEEecccchHHHHhcCCCHHHHHHHHhCCCCC
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CCCCCccccccCCCCCCccccCccccchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEE
Q 019498 81 YGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC 160 (340)
Q Consensus 81 ~~~G~~~~~h~~~~~~~~~~~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv 160 (340)
.++|+++++|++....++++.+|+||+++|+|+|+|+|.++++++++|||++|||++++|.+||+||+|+.|+||+||||
T Consensus 159 ~~~G~g~~~h~~~~~~~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~~vv~i~GDGa~~~G~~~Eal~~A~~~~lpvi~Vv 238 (407)
T 1qs0_A 159 PLKGRQLPIMYSVREAGFFTISGNLATQFVQAVGWAMASAIKGDTKIASAWIGDGATAESDFHTALTFAHVYRAPVILNV 238 (407)
T ss_dssp TTTTCSCTTCCCBGGGTBCCCCSSSSHHHHHHHHHHHHHHHTTCCCCEEEEEETGGGGSHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCCCCceeecchhccCccccccccccchhHHHHHHHHHHHhCCCCEEEEEECCchhhcChHHHHHHHHHHHCcCEEEEE
Confidence 88899999999887778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCccccccccCcc-CccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEecCCCCCCCCCCC
Q 019498 161 RNNGWAISTPISDQF-RSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDST 239 (340)
Q Consensus 161 ~nN~~~~~~~~~~~~-~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~~gHs~~dd~~ 239 (340)
+||+|+++++..... ..++++++|++|||++++|||+|+++|++++++|++++|++++|+|||++|||.+|||++|||.
T Consensus 239 ~NN~~gi~~~~~~~~~~~~d~a~~a~a~G~~~~~VdG~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~Ghs~~Dd~~ 318 (407)
T 1qs0_A 239 VNNQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVYAASRWAAERARRGLGPSLIEWVTYRAGPHSTSDDPS 318 (407)
T ss_dssp EECSEETTEEGGGGTTTTCCSTHHHHHTTCEEEEEETTCHHHHHHHHHHHHHHHHTTSCCEEEEEECCCCSCSSTTCCGG
T ss_pred ECCCcceeeccccccCCCCCHHHHHHHcCCeEEEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEeeccCCcCCCCCcc
Confidence 999999998877665 5679999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHhCCChHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHh------CCCCCccccccccccCCC
Q 019498 240 KYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEK------AEKPPISDLFTDVYDVSP 313 (340)
Q Consensus 240 ~Yr~~~e~~~~~~~~dpi~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~a~~~a~~------~~~p~~~~~~~~v~~~~~ 313 (340)
.||+++|++.|+ ++|||.+|+++|+++|+||++++++++++++++|++++++|++ +|.|+++++|+|||++.|
T Consensus 319 ~Yr~~~e~~~~~-~~DPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~~~~~~~p~p~~~~~~~~vy~~~~ 397 (407)
T 1qs0_A 319 KYRPADDWSHFP-LGDPIARLKQHLIKIGHWSEEEHQATTAEFEAAVIAAQKEAEQYGTLANGHIPSAASMFEDVYKEMP 397 (407)
T ss_dssp GTSCTTHHHHCT-TCCHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSSSCCCCCSSGGGSSSSSSCC
T ss_pred ccCCHHHHHHHh-cCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCHHHHHhhccCCCC
Confidence 999999999998 5999999999999999999999999999999999999999998 589999999999999999
Q ss_pred ccHHHHHHH
Q 019498 314 SNLREQEHS 322 (340)
Q Consensus 314 ~~~~~~~~~ 322 (340)
|++.+|++.
T Consensus 398 ~~l~~q~~~ 406 (407)
T 1qs0_A 398 DHLRRQRQE 406 (407)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999999875
No 3
>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A*
Probab=100.00 E-value=3.2e-74 Score=555.83 Aligned_cols=310 Identities=29% Similarity=0.447 Sum_probs=294.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHcCCc-cccccCCchHHHHHHHHHccCCCcEEEccCccHHHHHHcCCCHHHHHHHhhcCCC
Q 019498 1 MYNDMVTLQTMDTIFYEAQRQGRI-SFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKA 79 (340)
Q Consensus 1 ~y~~M~~~R~~e~~~~~~~~~g~~-~~~~~~~G~Ea~~~~~~~al~~~D~~~~~yR~~~~~l~~G~~~~~~~~~~~~~~~ 79 (340)
+|+.|+++|.||+++..+++||++ +|+|++.||||+++|++.+|++.|+++++||+|++++++|+++.++|++++|+.+
T Consensus 39 ~yr~M~~~R~~e~~~~~l~~~g~i~gf~~~~~GqEa~~vg~~~al~~~D~i~~~yR~~~~~~~~G~~~~~i~~e~~g~~~ 118 (365)
T 2ozl_A 39 YYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKG 118 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSCSCCCCCTTCHHHHHHHHHTSCTTSEEECCSCCHHHHHHTTCCHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccccccCCCChHHHHHHHHHhhCCCCEEehHHHHHHHHHhcCCCHHHHHHHHcCCCC
Confidence 599999999999999999999999 8999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCCCCCccccCccccchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEE
Q 019498 80 DYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFI 159 (340)
Q Consensus 80 ~~~~G~~~~~h~~~~~~~~~~~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~v 159 (340)
|.++|+++++|+.+ .++++.+|+||+++|+|+|+|+|.++++++++|||++|||++++|.+||+||+|+.|+||+|||
T Consensus 119 g~~~g~gg~~H~~~--~~~~~~~g~~G~~lp~A~G~A~A~~~~~~~~~vv~~~GDGa~~~G~~~Ealn~A~~~~lpvi~v 196 (365)
T 2ozl_A 119 GCAKGKGGSMHMYA--KNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFI 196 (365)
T ss_dssp STTTTSSCTTCCCB--TTBCCCCCSTTTHHHHHHHHHHHHHHHTCCCCEEEEEETTGGGCHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCCCCCCcCc--cccCCCcchhhhhhHHHHHHHHHHHhcCCCceEEEEECchhhhccHHHHHHHHHHHHCcCEEEE
Confidence 98888888888754 4788888999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCccccccccCccCccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEecCCCCCCCCCCC
Q 019498 160 CRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDST 239 (340)
Q Consensus 160 v~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~~gHs~~dd~~ 239 (340)
|+||+|+++++.......++++. ++||+++++|||+|+++|++++++|++++|++++|+|||++|||.+|||++|++.
T Consensus 197 v~NN~~g~~t~~~~~~~~~~~~~--ra~g~p~~~VdG~D~~av~~a~~~A~~~~r~~~gP~lIe~~t~R~~gHs~~D~~~ 274 (365)
T 2ozl_A 197 CENNRYGMGTSVERAAASTDYYK--RGDFIPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHEMSDPGV 274 (365)
T ss_dssp EEECSEETTEEHHHHCSCCCGGG--TTTTSCEEEEETTCHHHHHHHHHHHHHHHHTTCCCEEEEEECCCSSCSSTTCCSC
T ss_pred EECCCcccCCCcccccCCCCHHH--HhCCCCEEEEeCCCHHHHHHHHHHHHHHHHhCCCCEEEEEEeecCCCCCCCCCCc
Confidence 99999999987766666677877 5799999999999999999999999999999999999999999999999999888
Q ss_pred CCCChHHHHHHHhCCChHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccccccccccCCCc
Q 019498 240 KYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVYDVSPS 314 (340)
Q Consensus 240 ~Yr~~~e~~~~~~~~dpi~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~p~~~~~~~~v~~~~~~ 314 (340)
.||+++|++.|++++|||.+|+++|+++|++|++++++++++++++|++++++|+++|.|+++++|+|||++.++
T Consensus 275 ~Yr~~~e~~~~~~~~dpi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~p~p~~~~~~~~vy~~~~~ 349 (365)
T 2ozl_A 275 SYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSSDPP 349 (365)
T ss_dssp SSSCHHHHHHHHHHHCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHSCCCCGGGTTCSSSSSCCC
T ss_pred ccCCHHHHHHHHhCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHhhhcCCCCh
Confidence 899999999998557999999999999999999999999999999999999999999999999999999997765
No 4
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A*
Probab=100.00 E-value=3.3e-74 Score=556.87 Aligned_cols=318 Identities=38% Similarity=0.627 Sum_probs=296.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHcCCccccccCCchHHHHHHHHHccCCCcEEEccCccHHHHHHcCCCHHHHHHHhhcCCCC
Q 019498 1 MYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKAD 80 (340)
Q Consensus 1 ~y~~M~~~R~~e~~~~~~~~~g~~~~~~~~~G~Ea~~~~~~~al~~~D~~~~~yR~~~~~l~~G~~~~~~~~~~~~~~~~ 80 (340)
+|+.|+++|.||+++.++++||+++|+|++.||||+++|++.+|++.|+++++||+|++++.+|.++..+|.+++|+.+
T Consensus 49 ~y~~M~~~R~fe~~~~~~~~qgr~g~~~~~~G~Ea~~vg~~~~l~~~D~v~~~~R~~~~~~~~G~~~~~~~~el~G~~~- 127 (368)
T 1w85_A 49 LMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFH- 127 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCCSCCCCTTCHHHHHHHHHTCCTTCEEECCSSCHHHHHHTTCCHHHHHHHHHTCGG-
T ss_pred HHHHHHHHHHHHHHHHHHhhCCccccCCCCCCHHHHHHHHHHhcCCcCEEEecchhHHHHHhcCCCHHHHHHHHCCCCC-
Confidence 5999999999999999999999999999999999999999999999999999999999999999999999999999754
Q ss_pred CCCCCccccccCCCCCCccccCccccchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEE
Q 019498 81 YGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC 160 (340)
Q Consensus 81 ~~~G~~~~~h~~~~~~~~~~~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv 160 (340)
|+ ++| ...++.+++|+||+++|+|+|+|+|.++.+++++|||++|||++++|.++|+||+|++|+||+||||
T Consensus 128 ---G~--~~h---~~~~~~~~~g~lG~~lp~AvG~A~A~~~~~~~~~vv~i~GDGa~~~G~~~Eal~~A~~~~lpvi~vv 199 (368)
T 1w85_A 128 ---GN--QIP---EGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVV 199 (368)
T ss_dssp ---GG--CCC---TTCCBCCCCCSTTHHHHHHHHHHHHHHHTTCSCCEEEEEETGGGGSHHHHHHHHHHHHTTCCEEEEE
T ss_pred ---CC--CCC---cccccCCCccccCccccHHHHHHHHhHhhCCCCeEEEEEchhhhhhcHHHHHHHHHHHHCcCEEEEE
Confidence 33 345 3457888899999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCccccccccCccCccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEecCCCCC-CCCCCC
Q 019498 161 RNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHT-TSDDST 239 (340)
Q Consensus 161 ~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~~gHs-~~dd~~ 239 (340)
+||+|+++++.....+.++++++|++|||++++|||+|+++|++++++|++++|++++|+|||++|||.+||| ++|||.
T Consensus 200 ~NN~~gi~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~av~~a~~~A~~~~r~~~gP~lIe~~t~r~~gHs~~~Ddp~ 279 (368)
T 1w85_A 200 QNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPT 279 (368)
T ss_dssp EECSEETTEEGGGTCSCSCSGGGGGGTTCCEEEEETTCHHHHHHHHHHHHHHHHTTSCCEEEEEECCCSSCSCSSCC---
T ss_pred EcCCccceeccccccCCCCHHHHHHHCCCCEEEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEeeccCCCCCCCCCcc
Confidence 9999999998877777789999999999999999999999999999999999999999999999999999999 999999
Q ss_pred CCCChHHHHHHHhCCChHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccccccccccCCCccHHHH
Q 019498 240 KYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVYDVSPSNLREQ 319 (340)
Q Consensus 240 ~Yr~~~e~~~~~~~~dpi~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~p~~~~~~~~v~~~~~~~~~~~ 319 (340)
.||+++|++.|+ ++|||.+|+++|+++|++|++++++++++++++|++++++|+++|.|+++++|+|||++.||++.+|
T Consensus 280 ~yr~~~e~~~~~-~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~p~p~~~~~~~~vy~~~~~~l~~q 358 (368)
T 1w85_A 280 RYRSKELENEWA-KKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQ 358 (368)
T ss_dssp ---CHHHHHHHH-TTCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHTSCCCCHHHHHHTSCSSCCHHHHHH
T ss_pred ccCCHHHHHHHh-cCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHhhccCCCChHHHHH
Confidence 999999999998 5999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 019498 320 EHSLRETIK 328 (340)
Q Consensus 320 ~~~l~~~~~ 328 (340)
++.+++.++
T Consensus 359 ~~~~~~~~~ 367 (368)
T 1w85_A 359 YEIYKEKES 367 (368)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhc
Confidence 999977653
No 5
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A*
Probab=100.00 E-value=2.1e-71 Score=538.05 Aligned_cols=325 Identities=41% Similarity=0.676 Sum_probs=312.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHcCCccccccCCchHHHHHHHHHccCCC-cEEEccCccHHHHHHcCCCHHHHHHHhhcCCC
Q 019498 1 MYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKND-DFVVPQYREPGVLLWRGFSMQEFANQCFGNKA 79 (340)
Q Consensus 1 ~y~~M~~~R~~e~~~~~~~~~g~~~~~~~~~G~Ea~~~~~~~al~~~-D~~~~~yR~~~~~l~~G~~~~~~~~~~~~~~~ 79 (340)
+|+.|+++|.||+++..++++|++++++++.|||++.++++.+|++. |+++++||+|++++.+|+++.++|.+++++.+
T Consensus 41 l~~~m~~~R~~~~~~~~~~~~G~~g~~~~~~G~ea~~~~~~~~l~~~rD~i~~s~r~~~~~~~~G~~~~~~l~~~~g~~~ 120 (367)
T 1umd_A 41 LYRDMLAARMLDERYTILIRTGKTSFIAPAAGHEAAQVAIAHAIRPGFDWVFPYYRDHGLALALGIPLKELLGQMLATKA 120 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCSCCCCCTTCHHHHHHHHHHSCTTTSEEECCTTTHHHHHHHTCCHHHHHHHHHTBTT
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCccCCCCCcCHHHHHHHHHHHcCCCCcEEEeCcHHHHHHHHcCCCHHHHHHHHhCCCC
Confidence 58999999999999999999999999999999999999999999988 99999999999999999999999999999999
Q ss_pred CCCCCCccccccCCCCCCccccCccccchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEE
Q 019498 80 DYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFI 159 (340)
Q Consensus 80 ~~~~G~~~~~h~~~~~~~~~~~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~v 159 (340)
+++.|+++++|+.....++.+++|++|+++|+|+|+|+|.|+.+++++|||++|||++++|.++|+|++|+.+++|+|+|
T Consensus 121 g~~~G~~~~~h~~~~~~~~~~~~g~lG~~l~~a~G~A~a~k~~~~~~~vv~i~GDGa~~~G~~~Eal~~A~~~~lpvi~v 200 (367)
T 1umd_A 121 DPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISMKLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFI 200 (367)
T ss_dssp CTTTTCSCSSCCCBTTTTBCCCCSSTTTTHHHHHHHHHHHHHTTCCCCEEEEEETGGGGSHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCCCCCCCcccccCcCCCCchhhhhhhHHHHHHHHHHHhCCCCeEEEEEcccccccCcHHHHHHHHHHhCcCEEEE
Confidence 98889999999987777888899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCccccccccCccCccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEecCCCCCCCCCCC
Q 019498 160 CRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDST 239 (340)
Q Consensus 160 v~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~~gHs~~dd~~ 239 (340)
|+||+|+++++.....+..++++++++|||++++|||+|+.+|++++++|+++++++++|+|||++|+|.+|||++|+|.
T Consensus 201 v~NN~~gi~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~av~~a~~~A~~~a~~~~gP~lIe~~t~r~~Ghs~~D~~~ 280 (367)
T 1umd_A 201 AENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVYRYGPHSSADDDS 280 (367)
T ss_dssp EEECSEETTEEHHHHCSSSCSGGGGGGTTSCEEEEETTCHHHHHHHHHHHHHHHHTTCCCEEEEEECCCCSCSSTTCCGG
T ss_pred EecCCeeeccChhhccCCCCHHHHHHHcCCcEEEeCCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEeecCCCCCCCCCcc
Confidence 99999999988766666789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHhCCChHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccccccccccCCCccHHHH
Q 019498 240 KYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVYDVSPSNLREQ 319 (340)
Q Consensus 240 ~Yr~~~e~~~~~~~~dpi~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~p~~~~~~~~v~~~~~~~~~~~ 319 (340)
.||+++|++.|+ ++|||.+|+++|+++|++|+++++++++++++++++++++|+++|.|+++++|+|||++.||++.+|
T Consensus 281 ~Yr~~~e~~~~~-~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~~~p~~~~~~~~vy~~~~~~l~~q 359 (367)
T 1umd_A 281 RYRPKEEVAFWR-KKDPIPRFRRFLEARGLWNEEWEEDVREEIRAELERGLKEAEEAGPVPPEWMFEDVFAEKPWHLLRQ 359 (367)
T ss_dssp GTSCHHHHHHHH-TTCHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCBCCGGGGGTTSSSSCCHHHHHH
T ss_pred ccCCHHHHHHHH-cCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHhhhcCCCChhHHHH
Confidence 999999999998 5899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 019498 320 EHSLRET 326 (340)
Q Consensus 320 ~~~l~~~ 326 (340)
++.+++.
T Consensus 360 ~~~~~~~ 366 (367)
T 1umd_A 360 EALLKEE 366 (367)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9998754
No 6
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=100.00 E-value=1.2e-58 Score=487.37 Aligned_cols=334 Identities=15% Similarity=0.151 Sum_probs=274.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHcCCccccccCCchHHHHHHHHHcc------CCCcEEEc-cCccHHHHHH--cCCCHHHHH
Q 019498 1 MYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAI------KNDDFVVP-QYREPGVLLW--RGFSMQEFA 71 (340)
Q Consensus 1 ~y~~M~~~R~~e~~~~~~~~~g~~~~~~~~~G~Ea~~~~~~~al------~~~D~~~~-~yR~~~~~l~--~G~~~~~~~ 71 (340)
+|+.|+++|.||+++..++++||. .+..||||++++++.+| +.+|++++ +||||+++|+ +|+++.++|
T Consensus 123 ~y~~m~~~R~fE~~l~~~~~~~k~---~g~~G~Ea~~~g~~~~l~~~~~l~~~D~v~gm~hRg~~~~Lan~~G~~~~~i~ 199 (868)
T 2yic_A 123 ILSKLNAAEAFETFLQTKYVGQKR---FSLEGAETVIPMMDAVIDQCAEHGLDEVVIAMPHRGRLNVLANIVGKPYSQIF 199 (868)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSCGG---GCCTTCTTHHHHHHHHHHHHHHTTCSEEEEECCSTTHHHHHHHTTCCCHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCc---ccCCChHHHHHHHHHHHHHhhhCCCCCEEEeccccchHHHHHHHhCCCHHHHH
Confidence 599999999999999999998884 23499999999999775 47999998 7999999999 999999999
Q ss_pred HHhhcCCCCC-C-CCCccccccCCCC------------CCccccCccccchhhHHHHHHHHhhhcC----------CCCe
Q 019498 72 NQCFGNKADY-G-KGRQMPIHYGSNK------------HNYFTVSSTIATQLPHAVGAAYALKMDR----------KDAC 127 (340)
Q Consensus 72 ~~~~~~~~~~-~-~G~~~~~h~~~~~------------~~~~~~~g~lG~~lp~A~G~A~a~k~~~----------~~~~ 127 (340)
++++|+.+++ + .|+++++|++... .++.+++|+||+++|+|+|+|+|.|+++ .+.+
T Consensus 200 ae~~G~~~g~~~~g~gdv~~Hlg~~~~~~~~~g~~~v~l~l~~n~s~Lg~~~P~A~G~A~A~k~~~~~~~~~~~~~~~~~ 279 (868)
T 2yic_A 200 SEFEGNLNPSQAHGSGDVKYHLGATGTYIQMFGDNDIEVSLTANPSHLEAVDPVLEGLVRAKQDLLDTGEEGSDNRFSVV 279 (868)
T ss_dssp TTCC------------CGGGTCCEEEEEECSSSSCEEEEEECCCCSSTTTTHHHHHHHHHHHHHHHTCSTTSSSCSCCEE
T ss_pred HHhcCCCCCCccCCCCCccccCCccccccccCCCcceeeeecCCCccccccccHHHHHHHHHHhhccCCcccccccCCce
Confidence 9999998876 4 3456788976421 2345678999999999999999999864 5679
Q ss_pred EEEEECCccc-CcchHHHHHHHHHhCCCC---EEEEEEeCCccccccccCccCccchhhhhhhcCceEEEEcCCCHHHHH
Q 019498 128 AVTYFGDGGT-SEGDFHAALNFSAVTEAP---VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIY 203 (340)
Q Consensus 128 vv~~~GDG~~-~~G~~~Eal~~A~~~~Lp---vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~ 203 (340)
++|++|||++ +||.+||+||+|+.|+|| +||||+||+|+++++.....+.+++.++|++|||++++|||+|+++|+
T Consensus 280 vv~~~GDGa~~~eG~v~Ealn~A~~~~lp~g~vi~iv~NN~~g~st~~~~~~s~~~~~~~a~a~G~p~~~VdG~D~~av~ 359 (868)
T 2yic_A 280 PLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVVNNQIGFTTAPTDSRSSEYCTDVAKMIGAPIFHVNGDDPEACA 359 (868)
T ss_dssp EEEEEEHHHHHHCHHHHHHHTTTTCTTTCCSCCEEEEEECSCBTTBCHHHHCSSSSTTGGGGGGTCCEEEEETTCHHHHH
T ss_pred EEEEECCcccccccHHHHHHHHHHhcCCCCCCeEEEEEcCCcccccCccccccccCHHHHHHhCCCcEEEEeCCCHHHHH
Confidence 9999999996 899999999999999998 999999999999997665555567889999999999999999999999
Q ss_pred HHHHHHHHHhHccCCCEEEEEEEecCCCCCCCCCCCCCCChHHHHHHHhCCChHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q 019498 204 SAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVR 283 (340)
Q Consensus 204 ~a~~~a~~~~r~~~~P~lIe~~t~R~~gHs~~dd~~~Yr~~~e~~~~~~~~dpi~~~~~~L~~~g~~~~~~~~~~~~~~~ 283 (340)
.|+++|++++|++++|+|||++|||++|||++|+|. ||.+.|++.|++++||+.+|+++|+++|++|++++++++++++
T Consensus 360 ~a~~~A~~~ar~~~~PvlIe~~tyR~~GHs~~D~p~-~~~p~~~~~~~~~~dPi~~~~~~L~~~G~~t~ee~~~i~~e~~ 438 (868)
T 2yic_A 360 WVARLAVDFRQAFKKDVVIDMLCYRRRGHNEGDDPS-MTQPYMYDVIDTKRGSRKAYTEALIGRGDISMKEAEDALRDYQ 438 (868)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECCCCSCSSTTCCGG-GTCHHHHHHHTTCCCHHHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEEEEeecCCCcCcccccc-cCChHHHHHHHhCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999985 6666777788767899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-C-CC-CccccccccccC----CCccHHHHHHHHHHHHHhCCCCCCCCCC
Q 019498 284 KQILHALQEAEKA-E-KP-PISDLFTDVYDV----SPSNLREQEHSLRETIKKHPQDYPSNVP 339 (340)
Q Consensus 284 ~~~~~a~~~a~~~-~-~p-~~~~~~~~v~~~----~~~~~~~~~~~l~~~~~~~p~~~~~~~~ 339 (340)
+++++++++|++. | .| ++ +++.++|.. .+....+..+.+.+.+...|++|..|+-
T Consensus 439 ~~v~~a~~~a~~~~p~~~~~~-~~~~~~~~~~~~~~t~~~~~~l~~~~~~~~~~p~~~~~~~~ 500 (868)
T 2yic_A 439 GQLERVFNEVRELEKHEIEPS-ESVEADQQIPSKLATAVDKAMLQRIGDAHLALPEGFTVHPR 500 (868)
T ss_dssp HHHHHHHHHHHHHHHC------------------CCCCCCHHHHHHHHHHTTCCCTTCCCCTT
T ss_pred HHHHHHHHHHHhcCCCCcccc-cccccccccccCCCCccCHHHHHHHHHhhccCCcccccchh
Confidence 9999999998873 2 22 23 344455542 1223456777777788889999988764
No 7
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=100.00 E-value=1.1e-57 Score=490.56 Aligned_cols=334 Identities=15% Similarity=0.151 Sum_probs=273.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHcCCccccccCCchHHHHHHHHHcc------CCCcEEEc-cCccHHHHHH--cCCCHHHHH
Q 019498 1 MYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAI------KNDDFVVP-QYREPGVLLW--RGFSMQEFA 71 (340)
Q Consensus 1 ~y~~M~~~R~~e~~~~~~~~~g~~~~~~~~~G~Ea~~~~~~~al------~~~D~~~~-~yR~~~~~l~--~G~~~~~~~ 71 (340)
+|+.|+++|.||+++..++++||. .+..||||++++++.+| +.+|++++ +||||+++|+ +|+++.++|
T Consensus 368 ~y~~m~~~r~fE~~l~~~~~~~k~---~g~~GqEa~~~g~~~~l~~~~~l~~~D~v~gm~hRg~~~~La~~~G~~~~~i~ 444 (1113)
T 2xt6_A 368 ILSKLNAAEAFETFLQTKYVGQKR---FSLEGAETVIPMMDAVIDQCAEHGLDEVVIAMPHRGRLNVLANIVGKPYSQIF 444 (1113)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSCGG---GCCTTCTTHHHHHHHHHHHHHHTTCSEEEEECCSTTHHHHHHHTTCCCHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCc---ccCCChHHHHHHHHHHHHHhhhCCCCCEEEeccccchHHHHHHHhCCCHHHHH
Confidence 599999999999999999998885 12399999999997774 57999998 7999999999 999999999
Q ss_pred HHhhcCCCCC-C-CCCccccccCCCC------------CCccccCccccchhhHHHHHHHHhhhcC----------CCCe
Q 019498 72 NQCFGNKADY-G-KGRQMPIHYGSNK------------HNYFTVSSTIATQLPHAVGAAYALKMDR----------KDAC 127 (340)
Q Consensus 72 ~~~~~~~~~~-~-~G~~~~~h~~~~~------------~~~~~~~g~lG~~lp~A~G~A~a~k~~~----------~~~~ 127 (340)
++++|+.+++ + .|+++++|++... .++.+++|+||+++|+|+|+|+|.|+.+ .+.+
T Consensus 445 ae~~G~~~g~~~~g~gdv~~Hlg~~~~~~~~~g~~~v~l~l~~n~s~Lg~~~p~A~G~A~A~k~~~~~~~~~~~~~~~~~ 524 (1113)
T 2xt6_A 445 SEFEGNLNPSQAHGSGDVKYHLGATGTYIQMFGDNDIEVSLTANPSHLEAVDPVLEGLVRAKQDLLDTGEEGSDNRFSVV 524 (1113)
T ss_dssp TTC-------------CGGGTCCEEEEEECSSSSCEEEEEECCCCSSTTTTHHHHHHHHHHHHHHTTBSTTSSBSCCCEE
T ss_pred HHhcCCCCCCccCCCCCccccCCccccccccCCCcceeeeecCCCccccccccHHHHHHHHHHHhccccCccccccCCcE
Confidence 9999998876 4 3456788976421 2345678999999999999999999865 5689
Q ss_pred EEEEECCccc-CcchHHHHHHHHHhCCCC---EEEEEEeCCccccccccCccCccchhhhhhhcCceEEEEcCCCHHHHH
Q 019498 128 AVTYFGDGGT-SEGDFHAALNFSAVTEAP---VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIY 203 (340)
Q Consensus 128 vv~~~GDG~~-~~G~~~Eal~~A~~~~Lp---vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~ 203 (340)
++|++|||++ +||.+||+||+|+.|+|| +||||+||+|+++++.....+..++.+++++|||++++|||+|+++|+
T Consensus 525 ~v~~~GDGa~~~eG~~~Ealn~A~~~~lp~g~vi~iv~NN~~gist~~~~~~s~~~~~~~a~a~G~p~~~VdG~D~~av~ 604 (1113)
T 2xt6_A 525 PLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVVNNQIGFTTAPTDSRSSEYCTDVAKMIGAPIFHVNGDDPEACA 604 (1113)
T ss_dssp EEEEEEHHHHHHCTHHHHHHTTTTCTTTCCSCCEEEEEECSCBTTBCHHHHCSSSSTTGGGGGGTCCEEEEETTCHHHHH
T ss_pred EEEEECCcccccccHHHHHHHHHhhcCCCCCCeEEEEEeCCcccccCccccccccCHHHHHHhcCCcEEEEcCCCHHHHH
Confidence 9999999996 899999999999999998 999999999999997654545566889999999999999999999999
Q ss_pred HHHHHHHHHhHccCCCEEEEEEEecCCCCCCCCCCCCCCChHHHHHHHhCCChHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q 019498 204 SAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVR 283 (340)
Q Consensus 204 ~a~~~a~~~~r~~~~P~lIe~~t~R~~gHs~~dd~~~Yr~~~e~~~~~~~~dpi~~~~~~L~~~g~~~~~~~~~~~~~~~ 283 (340)
.|++.|++++|++++|+|||++|||.+|||++|+|. ||.+.|++.|++++||+.+|+++|+++|++|++++++++++++
T Consensus 605 ~a~~~A~~~~r~~~~PvlIe~~tyR~~GHs~~D~p~-~~~~~~~~~~~~~~dpi~~~~~~L~~~G~~t~ee~~~i~~e~~ 683 (1113)
T 2xt6_A 605 WVARLAVDFRQAFKKDVVIDMLCYRRRGHNEGDDPS-MTQPYMYDVIDTKRGSRKAYTEALIGRGDISMKEAEDALRDYQ 683 (1113)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECCCCSCSSTTCCGG-GTCHHHHHHHTTCCCHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEEEeEccCCcCCCCccc-cCChHHHHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999985 5566777778767899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-C-CC-CccccccccccC----CCccHHHHHHHHHHHHHhCCCCCCCCCC
Q 019498 284 KQILHALQEAEKA-E-KP-PISDLFTDVYDV----SPSNLREQEHSLRETIKKHPQDYPSNVP 339 (340)
Q Consensus 284 ~~~~~a~~~a~~~-~-~p-~~~~~~~~v~~~----~~~~~~~~~~~l~~~~~~~p~~~~~~~~ 339 (340)
+++++++++|++. | .| ++ +.+.++|.+ .+....+..+.+.+.+...|++|..|+-
T Consensus 684 ~~v~~a~~~a~~~~~~~~~~~-~~~~~~~~~~~~~~t~~~~~~l~~~~~~~~~~p~~~~~~~~ 745 (1113)
T 2xt6_A 684 GQLERVFNEVRELEKHEIEPS-ESVEADQQIPSKLATAVDKAMLQRIGDAHLALPEGFTVHPR 745 (1113)
T ss_dssp HHHHHHHHHHHHHHHHC-----------------CCCCCCHHHHHHHHHHTTCCCTTCCCCTT
T ss_pred HHHHHHHHHHHhcCCCCcccc-cccccccccccCCCCccCHHHHHHHHHhhccCCcccccchh
Confidence 9999999999873 3 22 23 344555642 1223456777888888899999988764
No 8
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=100.00 E-value=1.9e-56 Score=473.09 Aligned_cols=334 Identities=14% Similarity=0.110 Sum_probs=261.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHcCCccccccCCchHHHHHHHHHccC------CCcEEEc-cCccHHHHHH--cCCCHHHHH
Q 019498 1 MYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIK------NDDFVVP-QYREPGVLLW--RGFSMQEFA 71 (340)
Q Consensus 1 ~y~~M~~~R~~e~~~~~~~~~g~~~~~~~~~G~Ea~~~~~~~al~------~~D~~~~-~yR~~~~~l~--~G~~~~~~~ 71 (340)
+|+.|+++|.||+++..++++|| +.+..|||++.++++.+++ .+|++++ +||||+++|+ +|+++.++|
T Consensus 203 ~y~~m~~~r~fE~~l~~~~~~gk---rf~~~G~Ea~i~g~~~~~~~a~~~g~~D~v~g~~hRg~~~~Lan~~G~~~~~i~ 279 (933)
T 2jgd_A 203 FLSELTAAEGLERYLGAKFPGAK---RFSLEGGDALIPMLKEMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLF 279 (933)
T ss_dssp HHHHHHHHHHHHHHHHHHCCC-----CCCCTTCTTHHHHHHHHHHHHHTTTCCEEEEECCSTTHHHHHHHTTCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC---cccCCCchHHHHHHHHHHHHHhhCCCCCEEecCCCcCHHHHHHHHhCCCHHHHH
Confidence 59999999999999999999988 2346899999999766654 6999996 8999999999 999999999
Q ss_pred HHhhcCCCCCCCCCccccccCCCCC----------CccccCccccchhhHHHHHHHHhhhcC-----CCCeEEEEECCcc
Q 019498 72 NQCFGNKADYGKGRQMPIHYGSNKH----------NYFTVSSTIATQLPHAVGAAYALKMDR-----KDACAVTYFGDGG 136 (340)
Q Consensus 72 ~~~~~~~~~~~~G~~~~~h~~~~~~----------~~~~~~g~lG~~lp~A~G~A~a~k~~~-----~~~~vv~~~GDG~ 136 (340)
++++|+.++.+.|+++++|++.... .+.+++|++|+++|+|+|+|+|.++++ .+.++||++|||+
T Consensus 280 ~e~~G~~~g~~g~gdv~~Hlg~~~~~~~~gg~~~l~l~~~~shlg~~~p~A~G~A~A~~~~~~~~~~~~~~vv~v~GDGa 359 (933)
T 2jgd_A 280 DEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDAA 359 (933)
T ss_dssp HHHHTCC--CCSCCCCGGGCCEEEEEEETTEEEEEEECCCCSSTTCHHHHHHHHHHHHHTTSSSCCGGGEEEEEEEEHHH
T ss_pred HHhcCCCCCCCCCCCccccCCcccccccCCCceEEeecccCcccccccCHHHHHHHHHHhhccccCCCCeEEEEEECCcc
Confidence 9999998877666778889875321 234678999999999999999999874 6789999999999
Q ss_pred c-CcchHHHHHHHHHhCCCC---EEEEEEeCCccccc-cccCccCccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHH
Q 019498 137 T-SEGDFHAALNFSAVTEAP---VIFICRNNGWAIST-PISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAARE 211 (340)
Q Consensus 137 ~-~~G~~~Eal~~A~~~~Lp---vi~vv~nN~~~~~~-~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~ 211 (340)
+ ++|++||+||+|+.+++| +|+||+||+|++++ +...+....++++++++|||++++|||+|+++|+++++.|++
T Consensus 360 ~a~qG~~~Ealn~A~~~~lp~gg~I~vv~nN~~~ist~~~~~~~~~~~~~~~a~a~g~p~~~VdG~D~~av~~a~~~A~e 439 (933)
T 2jgd_A 360 VTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALD 439 (933)
T ss_dssp HHHCTHHHHHHHHTTSTTTCCSCCEEEEEECC---------------CGGGGGGTTTCCEEEEETTCHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHhhccCCCCCceEEEEEeCCccccCCCHHhcccchhHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHH
Confidence 8 899999999999999999 99999999999999 887766677899999999999999999999999999999999
Q ss_pred HhHccCCCEEEEEEEecCCCCCCCCCCCCCCChHHHHHHHhCCChHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
Q 019498 212 MAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQ 291 (340)
Q Consensus 212 ~~r~~~~P~lIe~~t~R~~gHs~~dd~~~Yr~~~e~~~~~~~~dpi~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~a~~ 291 (340)
++|.+++|+|||+.|||+.||+++|+| .||+++|++.|++.+||+.+|+++|+++|++|++++++++++++++|+++++
T Consensus 440 ~~r~~~~P~lIe~~tyR~~GH~~~D~~-~yr~~~e~~~~~~~~dPi~~~~~~Li~~Gv~t~~~~~~i~~~~~~~v~~a~~ 518 (933)
T 2jgd_A 440 FRNTFKRDVFIDLVCYRRHGHNEADEP-SATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDC 518 (933)
T ss_dssp HHHHHCCCEEEEEECCCCC------------CCTTHHHHHTSCCHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHhcCCCEEEEEeeeeecCcCcccch-hhCCHHHHHHHHccCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999986 5999999999985579999999999999999999999999999999999999
Q ss_pred HHHhC-CCCCcccccccccc------CCCccHHHHHHHHHHHHHhCCCCCCCCC
Q 019498 292 EAEKA-EKPPISDLFTDVYD------VSPSNLREQEHSLRETIKKHPQDYPSNV 338 (340)
Q Consensus 292 ~a~~~-~~p~~~~~~~~v~~------~~~~~~~~~~~~l~~~~~~~p~~~~~~~ 338 (340)
.|++. |.|.....+..+.. ..+....+..+.+.+.+...|++|..|+
T Consensus 519 ~A~~~~p~~~~~~~~~~~~~~~~~~~~~tg~~~~~l~~i~~~~~~~p~~~~~~~ 572 (933)
T 2jgd_A 519 VVAEWRPMNMHSFTWSPYLNHEWDEEYPNKVEMKRLQELAKRISTVPEAVEMQS 572 (933)
T ss_dssp CCTTEECCCGGGCTTGGGSSCCTTCCCCCCCCHHHHHHHHHHTTCCCTTSCCCH
T ss_pred HHHhcCCCCcchhhcccccccccccCCCCCCCHHHHHHHHhhhcCCCCCCcccH
Confidence 88773 33311123333211 1122234555666666677888887653
No 9
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=100.00 E-value=6.3e-33 Score=286.36 Aligned_cols=198 Identities=22% Similarity=0.189 Sum_probs=165.5
Q ss_pred cE-EEc-cCcc---HHHHHHcCC-CHHHHHHHhhcCCCCCCCCCccccccCCC-CCCccccCccccchhhHHHHHHHHhh
Q 019498 48 DF-VVP-QYRE---PGVLLWRGF-SMQEFANQCFGNKADYGKGRQMPIHYGSN-KHNYFTVSSTIATQLPHAVGAAYALK 120 (340)
Q Consensus 48 D~-~~~-~yR~---~~~~l~~G~-~~~~~~~~~~~~~~~~~~G~~~~~h~~~~-~~~~~~~~g~lG~~lp~A~G~A~a~k 120 (340)
|. |++ .|-+ .++++..|. .+.+-|..++.. |+..++|+... .+++...+|+||+++|.|+|+|+|.+
T Consensus 62 Dr~vls~GH~~~~lYa~l~l~G~~~~~~~l~~~r~~------~~~~~ghp~~~~~~g~~~~~G~lG~gl~~AvG~A~A~~ 135 (651)
T 2e6k_A 62 DRFVLSAGHGSMLLYAVLHLTGYDLPLEELKSFRQW------GSKTPGHPERGHTPGVEVTTGPLGQGISTAVGLALAER 135 (651)
T ss_dssp CEEEESSGGGHHHHHHHHHHTTCSCCHHHHTTTTST------TCSCCSSCCBTTBTTCCSCCCSTTHHHHHHHHHHHHHH
T ss_pred CeEEEeCcchhHHHHHHHHHhCCCCCHHHHHHhhcc------CCCCCCCCCCCCCCCeeeccccccchHHHHHHHHHHHH
Confidence 64 334 4777 567777887 445556666653 45557787643 36888899999999999999999998
Q ss_pred hcC----------CCCeEEEEECCcccCcchHHHHHHHHHhCCCC-EEEEEEeCCccccccccCccCccchhhhhhhcCc
Q 019498 121 MDR----------KDACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 189 (340)
Q Consensus 121 ~~~----------~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lp-vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~ 189 (340)
+.+ ++++|+|++|||++++|++||+|++|++++|| +|+||+||+|++++++.... ..|+.+++++|||
T Consensus 136 ~~~~~~~~~~~~~~~~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~ 214 (651)
T 2e6k_A 136 KLAAEFNRPGHVVVDHYTYVLASDGDLMEGVSGEAASLAGHWGLSKLIVFWDDNRISIDGPTDLAF-TEDVLARYRAYGW 214 (651)
T ss_dssp HHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECCEETTEEGGGTC-CSCHHHHHHHTTC
T ss_pred hhcccccccccCCCCCEEEEEEChhhhchhHHHHHHHHHHHcCCCeEEEEEECCCccccccccccc-CccHHHHHHhCCC
Confidence 765 68899999999999999999999999999996 99999999999998877665 5789999999999
Q ss_pred eEE-EEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEecCCCCCCCCCCCCC----CChHHHHHHHhCCChHH
Q 019498 190 RSI-RVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKY----RPVDEIEWWRTTQDPVT 258 (340)
Q Consensus 190 ~~~-~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~~gHs~~dd~~~Y----r~~~e~~~~~~~~dpi~ 258 (340)
+++ +|||||++++++++++|.+ .++|+||+++|+|.+||+ .+++..| ++++|++.|+ +++|+.
T Consensus 215 ~~~~~vdG~d~~~l~~al~~a~~----~~~P~lI~~~t~kg~G~~-~~~~~~~H~~~~~~~e~~~~~-~~~~~~ 282 (651)
T 2e6k_A 215 QTLRVEDVNDLEALRKAIKLAKL----DERPTLIAVRSHIGFGSP-KQDSAKAHGEPLGPEAVEATR-RNLGWP 282 (651)
T ss_dssp EEEEESCTTCHHHHHHHHHHHHH----SSSCEEEEEECCTTTTST-TTTSGGGTSSCCHHHHHHHHH-HHHTCC
T ss_pred eEEEEeCCCCHHHHHHHHHHHHH----CCCCEEEEEEeEeccccc-ccccccccccCCCHHHHHHHH-HHcCCC
Confidence 999 9999999999999998875 679999999999999999 5555666 5788999997 467663
No 10
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=100.00 E-value=1.2e-31 Score=278.04 Aligned_cols=200 Identities=20% Similarity=0.186 Sum_probs=168.1
Q ss_pred CcEE-Ec-cCcc---HHHHHHcCC-CHHHHHHHhhcCCCCCCCCCccccccCCCCCCccccCccccchhhHHHHHHHHhh
Q 019498 47 DDFV-VP-QYRE---PGVLLWRGF-SMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALK 120 (340)
Q Consensus 47 ~D~~-~~-~yR~---~~~~l~~G~-~~~~~~~~~~~~~~~~~~G~~~~~h~~~~~~~~~~~~g~lG~~lp~A~G~A~a~k 120 (340)
.|.+ ++ .|-+ +++++..|. .+.+-|.+++.. |+..++|+....+++...+|+||+++|.|+|+|+|.+
T Consensus 60 rDr~v~s~GH~~~~lYa~~~l~G~~~~~~~l~~~r~~------g~~~~ghp~~~~~g~~~~~G~lG~gl~~AvG~AlA~~ 133 (680)
T 1gpu_A 60 RDRFVLSNGHAVALLYSMLHLTGYDLSIEDLKQFRQL------GSRTPGHPEFELPGVEVTTGPLGQGISNAVGMAMAQA 133 (680)
T ss_dssp CCEEEESSGGGHHHHHHHHHHTTCSCCHHHHTTTTCT------TCSCCSSCCTTSTTCCSCCCSTTHHHHHHHHHHHHHH
T ss_pred CCEEEEecchHHHHHHHHHHHhCCCCCHHHHHhhccc------CCCCCCCCCccCCCeeeccccccchHHHHHHHHHHHH
Confidence 4644 44 4777 567777887 445556666653 5566888876567889999999999999999999998
Q ss_pred hcC----------CCCeEEEEECCcccCcchHHHHHHHHHhCCCC-EEEEEEeCCccccccccCccCccchhhhhhhcCc
Q 019498 121 MDR----------KDACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 189 (340)
Q Consensus 121 ~~~----------~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lp-vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~ 189 (340)
+.+ .+++|+|++|||++++|++||+|++|+.++|| +|+||+||+|++++++.... ..|+.+++++|||
T Consensus 134 ~~~~~~n~~~~~~~~~~vv~i~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~ 212 (680)
T 1gpu_A 134 NLAATYNKPGFTLSDNYTYVFLGDGCLQEGISSEASSLAGHLKLGNLIAIYDDNKITIDGATSISF-DEDVAKRYEAYGW 212 (680)
T ss_dssp HHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHHHHTC
T ss_pred HhccccccCccCCCCCeEEEEECCCccchhhHHHHHHHHHHhCCCcEEEEEECCCceEeccccccc-CccHHHHHHhcCC
Confidence 654 37899999999999999999999999999996 99999999999998876554 5789999999999
Q ss_pred eEE-EEcCC-CHHHHHHHHHHHHHHhHccCCCEEEEEEEecCCCCCCCCCC---CCCCChHHHHHHHhCCChH
Q 019498 190 RSI-RVDGN-DALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDS---TKYRPVDEIEWWRTTQDPV 257 (340)
Q Consensus 190 ~~~-~VdG~-d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~~gHs~~dd~---~~Yr~~~e~~~~~~~~dpi 257 (340)
+++ +|||| |++++++++++|.+ ..++|+||+++|+|.+||+..|++ ..||+++|++.|++ .+++
T Consensus 213 ~~~~~vdG~~d~~~l~~al~~A~~---~~~~P~lI~~~T~kg~G~~~~~~~~~H~~~~~~ee~~~~~~-~~~~ 281 (680)
T 1gpu_A 213 EVLYVENGNEDLAGIAKAIAQAKL---SKDKPTLIKMTTTIGYGSLHAGSHSVHGAPLKADDVKQLKS-KFGF 281 (680)
T ss_dssp EEEEESCTTTCHHHHHHHHHHHHH---CTTSCEEEEEECCTTTTSTTTTSGGGSSSCCCHHHHHHHHH-HTTC
T ss_pred eEEEEecCCCCHHHHHHHHHHHHH---CCCCCEEEEEEeecccccccCCCCccCCCCCCHHHHHHHHH-HcCC
Confidence 999 99999 99999999998875 357999999999999999977654 67999999999973 5544
No 11
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=99.97 E-value=1e-30 Score=270.08 Aligned_cols=181 Identities=22% Similarity=0.180 Sum_probs=154.3
Q ss_pred CcEEE-c-cCcc---HHHHHHcCC-CHHHHHHHhhcCCCCCCCCCccccccCC-CCCCccccCccccchhhHHHHHHHHh
Q 019498 47 DDFVV-P-QYRE---PGVLLWRGF-SMQEFANQCFGNKADYGKGRQMPIHYGS-NKHNYFTVSSTIATQLPHAVGAAYAL 119 (340)
Q Consensus 47 ~D~~~-~-~yR~---~~~~l~~G~-~~~~~~~~~~~~~~~~~~G~~~~~h~~~-~~~~~~~~~g~lG~~lp~A~G~A~a~ 119 (340)
.|.++ + .|-+ ++++...|+ .+.+-|.+++.. |+.+++|+.. ..+++..++|+||+++|.|+|+|+|.
T Consensus 76 rDrfvls~GH~s~~lYa~l~l~G~~~~~~~l~~fr~~------gs~~~ghp~~~~~pgv~~~tG~lG~gl~~AvG~AlA~ 149 (700)
T 3rim_A 76 RDRFVLSAGHSSLTLYIQLYLGGFGLELSDIESLRTW------GSKTPGHPEFRHTPGVEITTGPLGQGLASAVGMAMAS 149 (700)
T ss_dssp CCEEEESSTTCHHHHHHHHHHTTSSCCHHHHTTTTST------TCSCCSSCCBTTBTTCCSCCCSTTHHHHHHHHHHHHH
T ss_pred CCeEEECCCchhHHHHHHHHHhCCCCCHHHHHHhhcC------CCCCCCCCCCCCCCCccccccccCCcchHHHHHHHHH
Confidence 57444 4 5777 456677886 555557777763 6777889875 35688889999999999999999999
Q ss_pred hhc-------------CCCCeEEEEECCcccCcchHHHHHHHHHhCCCC-EEEEEEeCCccccccccCccCccchhhhhh
Q 019498 120 KMD-------------RKDACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGR 185 (340)
Q Consensus 120 k~~-------------~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lp-vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~ 185 (340)
|+. +.+++|+|++|||++++|++||++++|+.++|| +|+||+||+|++++++.... ..++.++++
T Consensus 150 k~~~~~~~~~~~~~~~~~~~~v~~~~GDG~l~eG~~~EAl~~A~~~~L~nli~i~d~N~~si~~~~~~~~-~~~~~~~~~ 228 (700)
T 3rim_A 150 RYERGLFDPDAEPGASPFDHYIYVIASDGDIEEGVTSEASSLAAVQQLGNLIVFYDRNQISIEDDTNIAL-CEDTAARYR 228 (700)
T ss_dssp HHHHHHHCTTSCTTCSTTCCCEEEEEEHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHH
T ss_pred HHHhhhccccccccccCCCCeEEEEECCcccccChHHHHHHHHHHcCCCcEEEEEECCCcccccchhhcc-chhHHHHHH
Confidence 974 467899999999999999999999999999995 99999999999998887654 678999999
Q ss_pred hcCceEEEE-cCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEecCCCCCCCCC
Q 019498 186 AYGVRSIRV-DGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDD 237 (340)
Q Consensus 186 a~G~~~~~V-dG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~~gHs~~dd 237 (340)
+|||++++| ||||+++|++|+++|.+ ..++|+||+++|+|.+||+...+
T Consensus 229 a~G~~~~~V~DG~D~~al~~Al~~A~~---~~~~P~lI~~~T~kG~G~~~~e~ 278 (700)
T 3rim_A 229 AYGWHVQEVEGGENVVGIEEAIANAQA---VTDRPSFIALRTVIGYPAPNLMD 278 (700)
T ss_dssp HHTCEEEEEECTTCHHHHHHHHHHHHH---CCSSCEEEEEECCTTTTCTTTTT
T ss_pred HcCCeEEEECCCCCHHHHHHHHHHHHH---cCCCCEEEEEEEEeeecCCccCC
Confidence 999999999 99999999999998875 36899999999999999987543
No 12
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=99.97 E-value=6.8e-30 Score=264.36 Aligned_cols=195 Identities=21% Similarity=0.179 Sum_probs=163.9
Q ss_pred cE-EEc-cCcc---HHHHHHcCC-CHHHHHHHhhcCCCCCCCCCccccccCCC-CCCccccCccccchhhHHHHHHHHhh
Q 019498 48 DF-VVP-QYRE---PGVLLWRGF-SMQEFANQCFGNKADYGKGRQMPIHYGSN-KHNYFTVSSTIATQLPHAVGAAYALK 120 (340)
Q Consensus 48 D~-~~~-~yR~---~~~~l~~G~-~~~~~~~~~~~~~~~~~~G~~~~~h~~~~-~~~~~~~~g~lG~~lp~A~G~A~a~k 120 (340)
|. |++ .|-+ ++++...|+ .+.+-+.+++.. |+..++|+... .+++..++|+||+++|.|+|+|+|.+
T Consensus 60 Drfvls~GH~~~~lYa~l~l~G~~~~~~~l~~~r~~------~s~~~ghp~~~~~pgv~~~tG~lG~gl~~AvG~AlA~~ 133 (673)
T 1r9j_A 60 DRFVMSNGHGCALQYALLHMAGYNLTMDDLKGFRQD------GSRTPGHPERFVTPGVEVTTGPLGQGIANAVGLAIAEA 133 (673)
T ss_dssp CEEEESSGGGHHHHHHHHHHHTCSCCHHHHHTTTST------TCSCCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHHH
T ss_pred CeEEEccccHHHHHHHHHHHcCCCCCHHHHHhhccC------CCCCCCCCCCCCCCCeeeccCCCCCcHHHHHHHHHHHH
Confidence 64 444 4766 456667787 556667777763 66778898754 46888899999999999999999998
Q ss_pred hcC----------CCCeEEEEECCcccCcchHHHHHHHHHhCCCC-EEEEEEeCCccccccccCccCccchhhhhhhcCc
Q 019498 121 MDR----------KDACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 189 (340)
Q Consensus 121 ~~~----------~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lp-vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~ 189 (340)
+.+ .+++|+|++|||++++|++||++++|++++|| +|+||+||+|++++++.... ..|+.+++++|||
T Consensus 134 ~~~~~~n~~g~~~~d~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li~i~d~N~~~i~~~~~~~~-~~d~~~~~~a~G~ 212 (673)
T 1r9j_A 134 HLAATFNRPGYNIVDHYTYVYCGDGCLMEGVCQEALSLAGHLALEKLIVIYDSNYISIDGSTSLSF-TEQCHQKYVAMGF 212 (673)
T ss_dssp HHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHHTCTTEEEEEEECSBCSSSBGGGTC-CCCHHHHHHHTTC
T ss_pred HhhhhccccccCCCCCEEEEEECcchhcccHHHHHHHHHHHhCCCcEEEEEECCCCccccchhhcc-CHhHHHHHHHCCC
Confidence 754 58899999999999999999999999999995 99999999999998887765 6789999999999
Q ss_pred eEE-EEcC-CCHHHHHHHHHHHHHHhHccCCCEEEEEEEecCCCCCCCCCC---CCCCChHHHHHHHh
Q 019498 190 RSI-RVDG-NDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDS---TKYRPVDEIEWWRT 252 (340)
Q Consensus 190 ~~~-~VdG-~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~~gHs~~dd~---~~Yr~~~e~~~~~~ 252 (340)
+++ .||| ||++++++|+++|.+ ..++|+||+++|+|.+||+..+.. ..+++++|++.|++
T Consensus 213 ~~~~~vdG~~d~~~l~~Al~~A~~---~~~~P~lI~~~T~kg~G~~~~~~~~~H~~~~~~ee~~~~~~ 277 (673)
T 1r9j_A 213 HVIEVKNGDTDYEGLRKALAEAKA---TKGKPKMIVQTTTIGFGSSKQGTEKVHGAPLGEEDIANIKA 277 (673)
T ss_dssp EEEEESCTTTCHHHHHHHHHHHHH---CCSSCEEEEEECCTTTTSTTTTSGGGTSSCCCHHHHHHHHH
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHH---cCCCCEEEEEecccccccccCCCcccccCCCCHHHHHHHHH
Confidence 999 8999 999999999998875 367999999999999999954432 34678899888863
No 13
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=99.97 E-value=7.2e-31 Score=270.01 Aligned_cols=199 Identities=16% Similarity=0.171 Sum_probs=158.2
Q ss_pred ccccccCCchHHHHHHHHHccC-CCcEEE--ccCccHHHHHHcCCCHHHHHHHhhcCCCCCCCCCccccccCCCC-CCcc
Q 019498 24 ISFYLTTSGEEAINIASAAAIK-NDDFVV--PQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNK-HNYF 99 (340)
Q Consensus 24 ~~~~~~~~G~Ea~~~~~~~al~-~~D~~~--~~yR~~~~~l~~G~~~~~~~~~~~~~~~~~~~G~~~~~h~~~~~-~~~~ 99 (340)
.++++++.|++.+.+++..+++ +.|+++ ..||++++.+.+|. .+.+..++.. |+ .+.|+.... ++..
T Consensus 47 ~Gh~~~~lg~~~~~~~l~~~~~~~~D~~v~~~gH~~y~~~~l~G~--~~~~~~~r~~------~g-~~g~~~~~~s~~~~ 117 (621)
T 2o1s_A 47 SGHFASGLGTVELTVALHYVYNTPFDQLIWDVGHQAYPHKILTGR--RDKIGTIRQK------GG-LHPFPWRGESEYDV 117 (621)
T ss_dssp GCTHHHHHTTHHHHHHHHHHSCTTTSEEEESSSTTCHHHHHTTTT--GGGGGGTTST------TS-CCSSCCTTTCTTCC
T ss_pred CCCcCCChhHHHHHHHHHhccCCCCCEEEEeCchHHHHHHHHhCC--Hhhhhccccc------CC-CCCCCCCCCCCCCc
Confidence 3789999999999999999999 899888 67999999999997 2223334432 22 345654322 3455
Q ss_pred ccCccccchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccccccCccCc--
Q 019498 100 TVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRS-- 177 (340)
Q Consensus 100 ~~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~-- 177 (340)
.++|++|+++|+|+|+|+|.++++++++|||++|||++++|++||+|++|+++++|+|+||+||+|+++++...+...
T Consensus 118 ~~~G~~G~gl~~A~G~AlA~~~~~~~~~Vv~v~GDG~~~~G~~~EaL~~A~~~~~pli~vvnnN~~~i~~~~~~~~~~~~ 197 (621)
T 2o1s_A 118 LSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENVGALNNHLA 197 (621)
T ss_dssp SCCSSSSCHHHHHHHHHHHHHHHTSCCCEEEEEETTGGGSHHHHHHHHHHHHHCCSEEEEEEECC---------------
T ss_pred cCCcccchHHHHHHHHHHHHHHhCCCCeEEEEEchhhhhccHHHHHHHHHHhhCCCEEEEEeCCCcccCCCcchHHHHHH
Confidence 679999999999999999999999999999999999999999999999999999999999999999998766432110
Q ss_pred --------------------------------cch-------hhhhhhcCceEE-EEcCCCHHHHHHHHHHHHHHhHccC
Q 019498 178 --------------------------------DGA-------VVKGRAYGVRSI-RVDGNDALAIYSAVHAAREMAIGEG 217 (340)
Q Consensus 178 --------------------------------~~~-------~~~a~a~G~~~~-~VdG~d~~~v~~a~~~a~~~~r~~~ 217 (340)
.++ ..++++|||+++ +|||||++++.+++++|.+ .+
T Consensus 198 ~~~~~~~y~~~~~~~~~~~~~~p~~~~~~~r~~~~~~~~~~p~~~~ea~G~~~~g~vdG~d~~~l~~al~~A~~----~~ 273 (621)
T 2o1s_A 198 QLLSGKLYSSLREGGKKVFSGVPPIKELLKRTEEHIKGMVVPGTLFEELGFNYIGPVDGHDVLGLITTLKNMRD----LK 273 (621)
T ss_dssp -----------------------------------------CHHHHHHTTCEEEEEEETTCHHHHHHHHHHHHH----SC
T ss_pred hhhcchhHHHHHHHHHHHHhccchHHHHHHHHHHHhhhccChhhHHHHCCCeEeeeeCCCCHHHHHHHHHHHHH----cC
Confidence 011 478999999999 9999999999999998875 57
Q ss_pred CCEEEEEEEecCCCCCCC
Q 019498 218 RPILIEALTYRVGHHTTS 235 (340)
Q Consensus 218 ~P~lIe~~t~R~~gHs~~ 235 (340)
+|+||+++|+|.+||+..
T Consensus 274 gP~lI~v~t~kg~G~~~~ 291 (621)
T 2o1s_A 274 GPQFLHIMTKKGRGYEPA 291 (621)
T ss_dssp SEEEEEEECCCTTCCCCC
T ss_pred CCEEEEEEEecccCCChh
Confidence 999999999999999854
No 14
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=99.97 E-value=1.9e-30 Score=266.13 Aligned_cols=182 Identities=23% Similarity=0.199 Sum_probs=152.2
Q ss_pred CcEEE-c-cCcc---HHHHHHcCCCHHHHHHHhhcCCCCCCCCCccccccCCCCCCccccCccccchhhHHHHHHHHhhh
Q 019498 47 DDFVV-P-QYRE---PGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKM 121 (340)
Q Consensus 47 ~D~~~-~-~yR~---~~~~l~~G~~~~~~~~~~~~~~~~~~~G~~~~~h~~~~~~~~~~~~g~lG~~lp~A~G~A~a~k~ 121 (340)
.|.++ + .|.+ .+++...|+.+.+-|.+++.. |+.+++|+....+++..++|+||+++|+|+|+|+|.++
T Consensus 66 rDr~v~s~GH~~~~ly~~~~l~G~~~~~~l~~~r~~------~s~l~ghp~~~~~~~d~~~G~lG~gl~~A~G~AlA~~~ 139 (616)
T 3mos_A 66 NDRFVLSKGHAAPILYAVWAEAGFLAEAELLNLRKI------SSDLDGHPVPKQAFTDVATGSLGQGLGAACGMAYTGKY 139 (616)
T ss_dssp SCEEEESSGGGHHHHHHHHHHTTSSCGGGGGGTTCT------TCSCCSSCCTTSTTCSSCCCSTTCHHHHHHHHHHHHHH
T ss_pred CCeEEEcCccHHHHHHHHHHHcCCCCHHHHHHhccC------CCCCCCCCCCCCCcccccccccCCccHHHHHHHHHHHH
Confidence 57444 4 4776 346667886544556666653 67888898766667777899999999999999999986
Q ss_pred cCC-CCeEEEEECCcccCcchHHHHHHHHHhCCCC-EEEEEEeCCccccccccCccCccchhhhhhhcCceEEEEcCCCH
Q 019498 122 DRK-DACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDA 199 (340)
Q Consensus 122 ~~~-~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lp-vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~ 199 (340)
.+. +++|||++|||++++|++||+|++|+.++|| +|+|++||+|++++++.......++.+++++|||++++|||||+
T Consensus 140 ~~~~~~~vv~v~GDG~~~eG~~~Eal~~A~~~~l~~livi~nnN~~~i~~~~~~~~~~~~~~~~~~a~G~~~~~VdG~d~ 219 (616)
T 3mos_A 140 FDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAILDINRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSV 219 (616)
T ss_dssp TSCCSCCEEEEEETGGGGSHHHHHHHHHHHHTTCTTEEEEEEECSBCSSSBCTTTTCHHHHHHHHHHTTCEEEEEETTCH
T ss_pred hCCCCCEEEEEECccccccCcHHHHHHHHHHcCCCcEEEEEECCCCCCcCCcccccChHHHHHHHHHcCCeEEEEcCCCH
Confidence 554 6899999999999999999999999999995 78899999999998877766667899999999999999999999
Q ss_pred HHHHHHHHHHHHHhHccCCCEEEEEEEecCCCCCCCCCCCC
Q 019498 200 LAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTK 240 (340)
Q Consensus 200 ~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~~gHs~~dd~~~ 240 (340)
+++.++++++ .++|+||+++|+|.+||+..+++..
T Consensus 220 ~~l~~al~~~------~~~P~lI~v~T~kg~G~~~~e~~~~ 254 (616)
T 3mos_A 220 EELCKAFGQA------KHQPTAIIAKTFKGRGITGVEDKES 254 (616)
T ss_dssp HHHHHHHHSC------CSSCEEEEEECCTTTTSTTTTTCSS
T ss_pred HHHHHHHHhc------CCCCEEEEEEEecccccccccCchh
Confidence 9999998543 4799999999999999988776643
No 15
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=99.97 E-value=2e-29 Score=259.88 Aligned_cols=193 Identities=22% Similarity=0.220 Sum_probs=152.7
Q ss_pred CcEE-Ec-cCcc---HHHHHHcCC-CHHHHHHHhhcCCCCCCCCCccccccCCC-CCCccccCccccchhhHHHHHHHHh
Q 019498 47 DDFV-VP-QYRE---PGVLLWRGF-SMQEFANQCFGNKADYGKGRQMPIHYGSN-KHNYFTVSSTIATQLPHAVGAAYAL 119 (340)
Q Consensus 47 ~D~~-~~-~yR~---~~~~l~~G~-~~~~~~~~~~~~~~~~~~G~~~~~h~~~~-~~~~~~~~g~lG~~lp~A~G~A~a~ 119 (340)
.|.+ ++ .|-+ ++++...|+ .+.+-|.+++.. |+..++|+... .+++..++|+||+++|+|+|+|+|.
T Consensus 59 rDrfvls~GH~s~~lYa~l~l~G~~~~~~~l~~~r~~------~s~~~ghp~~~~~~gve~~tG~lG~gl~~AvG~AlA~ 132 (663)
T 3kom_A 59 RDRFVLSNGHGSMLLYSLLHLTGYDLSIEDIKNFRQL------HSKTPGHPEYGYTPGVETTTGPLGQGVANAVGMALGE 132 (663)
T ss_dssp SCEEEECSSSCHHHHHHHHHHHTCSCCHHHHTTTTST------TCSCCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHH
T ss_pred CCeEEEeCCcccHHHHHHHHHhCCCCCHHHHHhhccC------CCCCCCCCCCCCCCCcccCCcchhhHHHHHHHHHHhH
Confidence 5744 44 5777 455666786 555567777763 56667887653 5688889999999999999999999
Q ss_pred hhcCC----------CCeEEEEECCcccCcchHHHHHHHHHhCCCC-EEEEEEeCCccccccccCccCccchhhhhhhcC
Q 019498 120 KMDRK----------DACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 188 (340)
Q Consensus 120 k~~~~----------~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lp-vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G 188 (340)
++.+. +++|+|++|||++++|++||+|++|++++|| +|+|++||+|+++++..... .+|+.+++++||
T Consensus 133 ~~~~~~~~~~~~~~~d~~v~~i~GDG~l~eG~~~Eal~~A~~~~L~~livi~dnN~~~i~~~~~~~~-~~d~~~~~~a~G 211 (663)
T 3kom_A 133 KLLSDRYNTPDLKVIDHHTYVFLGDGCLMEGVSHEACSLAGTLGLNKLVAFWDDNNISIDGDTKGWF-SDNTPERFRAYG 211 (663)
T ss_dssp HHHHHHHCBTTBCSCCCCEEEEECHHHHHSHHHHHHHHHHHHHTCTTEEEEEEECC-----CGGGTC-CCCHHHHHHHTT
T ss_pred HhhcccccccccccCCCeEEEEECchhhhhchHHHHHHHHHHhCCCeEEEEEECCCcccccchhhhc-chhHHHHHHHCC
Confidence 87543 7899999999999999999999999999996 89999999999998877654 578999999999
Q ss_pred ceEE-EEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEecCCCCCCCCCCCCCC----ChHHHHH
Q 019498 189 VRSI-RVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYR----PVDEIEW 249 (340)
Q Consensus 189 ~~~~-~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~~gHs~~dd~~~Yr----~~~e~~~ 249 (340)
|+++ +|||||++++.+|+++|.+ ..++|+||+++|+|.+||+...++..+. +++|++.
T Consensus 212 ~~~~~~vdG~d~~~l~~al~~A~~---~~~~P~lI~~~T~kg~G~~~~e~~~~~Hg~~l~~e~~~~ 274 (663)
T 3kom_A 212 WHVIENVDGHDFVAIEKAINEAHS---QQQKPTLICCKTVIGFGSPEKAGTASVHGSPLSDQERAS 274 (663)
T ss_dssp CEEEEEEETTCHHHHHHHHHHHHH---CSSSCEEEEEECCTTTTCTTTTTCSSTTSSCCCHHHHHH
T ss_pred CeEEEEEcCCCHHHHHHHHHHHHh---cCCCCEEEEEecccccccCCCCCCccccCCCCCHHHHHH
Confidence 9999 8999999999999988764 1579999999999999998765544333 4556554
No 16
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=99.97 E-value=3.8e-29 Score=259.01 Aligned_cols=193 Identities=23% Similarity=0.239 Sum_probs=146.1
Q ss_pred CcEE-Ec-cCcc---HHHHHHcCC-CHHHHHHHhhcCCCCCCCCCccccccCCC-CCCccccCccccchhhHHHHHHHHh
Q 019498 47 DDFV-VP-QYRE---PGVLLWRGF-SMQEFANQCFGNKADYGKGRQMPIHYGSN-KHNYFTVSSTIATQLPHAVGAAYAL 119 (340)
Q Consensus 47 ~D~~-~~-~yR~---~~~~l~~G~-~~~~~~~~~~~~~~~~~~G~~~~~h~~~~-~~~~~~~~g~lG~~lp~A~G~A~a~ 119 (340)
.|.+ ++ .|-+ .+++...|+ .+.+-|.+++.. |+..++|+... .+++..++|+||+++|+|+|+|+|.
T Consensus 98 rDrfvls~GH~s~~lYa~l~l~G~~~~~~~l~~~r~~------~s~~~ghp~~~~~~gve~~tG~lG~gl~~AvG~AlA~ 171 (711)
T 3uk1_A 98 RDRFVLSNGHGSMLLYSLLHLTGYDLPIEELKNFRQL------HSKTPGHPEYGITPGVETTTGPLGQGLANAVGMALGE 171 (711)
T ss_dssp CCEEEECSGGGHHHHHHHHHHHTCSCCHHHHHTTTST------TCSCCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHH
T ss_pred CCeEEEeCCcccHHHHHHHHHhCCCCCHHHHHhhccc------cCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHH
Confidence 5744 44 5777 455667787 556667777763 56667887643 4688889999999999999999999
Q ss_pred hhcCC----------CCeEEEEECCcccCcchHHHHHHHHHhCCCC-EEEEEEeCCccccccccCccCccchhhhhhhcC
Q 019498 120 KMDRK----------DACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 188 (340)
Q Consensus 120 k~~~~----------~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lp-vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G 188 (340)
++.+. +++|||++|||++++|++||+|++|++++|| +|+|++||+|++++++.... ..|+.+++++||
T Consensus 172 ~~~~~~~n~~~~~~~d~~vv~i~GDG~l~eG~~~Eal~~A~~~~L~~livI~dnN~~~i~~~~~~~~-~~d~~~~~~a~G 250 (711)
T 3uk1_A 172 ALLAAEFNRDDAKIVDHHTYVFLGDGCLMEGISHEACSLAGTLKLNKLIALYDDNGISIDGDVVNWF-HDDTPKRFEAYG 250 (711)
T ss_dssp HHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHHHTT
T ss_pred HhhcccccccccccCCCeEEEEECCcchhhccHHHHHHHHHHhCCCcEEEEEECCCcccccchhhhc-CCCHHHHHHHcC
Confidence 87643 7899999999999999999999999999996 89999999999998877654 578999999999
Q ss_pred ceEEE-EcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEecCCCCCCCCCCCCCC----ChHHHHHH
Q 019498 189 VRSIR-VDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYR----PVDEIEWW 250 (340)
Q Consensus 189 ~~~~~-VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~~gHs~~dd~~~Yr----~~~e~~~~ 250 (340)
|++++ |||||++++.+|+++|.+ .++|+||+++|+|.+||+..+++..|. +++|++..
T Consensus 251 ~~~~~~vdG~d~~~l~~Al~~A~~----~~~P~lI~v~T~kG~G~~~~e~~~~~Hg~~l~~e~~~~~ 313 (711)
T 3uk1_A 251 WNVIPNVNGHDVDAIDAAIAKAKR----SDKPSLICCKTRIGNGAATKAGGHDVHGAPLGADEIAKT 313 (711)
T ss_dssp CEEEEEEETTCHHHHHHHHHHHTT----CSSCEEEEEEC--------------------CHHHHHHH
T ss_pred CcEEEEeCCCCHHHHHHHHHHHHh----CCCCEEEEEccccccCCCCCCCcccccCCCCCHHHHHHH
Confidence 99999 999999999999987753 689999999999999998765555454 34555443
No 17
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=99.96 E-value=9.5e-29 Score=253.43 Aligned_cols=182 Identities=21% Similarity=0.218 Sum_probs=153.0
Q ss_pred CCcEEE-c-cCcc---HHHHHHcCC-CHHHHHHHhhcCCCCCCCCCccccccCCCCCCccccCccccchhhHHHHHHHHh
Q 019498 46 NDDFVV-P-QYRE---PGVLLWRGF-SMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYAL 119 (340)
Q Consensus 46 ~~D~~~-~-~yR~---~~~~l~~G~-~~~~~~~~~~~~~~~~~~G~~~~~h~~~~~~~~~~~~g~lG~~lp~A~G~A~a~ 119 (340)
+.|.++ + .|-+ .++++..|+ .+.+-|.+++.. |+..++|+....+++..++|+||+++|.|+|+|+|.
T Consensus 57 ~rDrfvls~GH~~~~lYa~l~l~G~~~~~~~l~~~r~~------~s~~~ghp~~~~~g~~~~tG~lG~gl~~AvG~AlA~ 130 (632)
T 3l84_A 57 NRDRLVFSGGHASALLYSFLHLSGYDLSLEDLKNFRQL------HSKTPGHPEISTLGVEIATGPLGQGVANAVGFAMAA 130 (632)
T ss_dssp TSCEEEESSGGGHHHHHHHHHHHTCSCCHHHHTTTTCT------TCSSCSSCCTTSTTCCSCCCSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCcccHHHHHHHHHhCCCCCHHHHHHHhcC------CCCCCCCCCCCCCCcccCCcchhhHHHHHHHHHHHH
Confidence 357544 3 5777 567777886 455556667653 555678877655688889999999999999999999
Q ss_pred hhcCC-------CCeEEEEECCcccCcchHHHHHHHHHhCCCC-EEEEEEeCCccccccccCccCccchhhhhhhcCceE
Q 019498 120 KMDRK-------DACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRS 191 (340)
Q Consensus 120 k~~~~-------~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lp-vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~ 191 (340)
++.+. +++|+|++|||++++|++||++++|++++|| +|+|++||+|+++++..... ..|+.+++++|||++
T Consensus 131 ~~~~~~~n~~~~d~~v~~v~GDG~~~eG~~~Eal~~A~~~~L~~livi~nnN~~~i~~~~~~~~-~~d~~~~~~a~G~~~ 209 (632)
T 3l84_A 131 KKAQNLLGSDLIDHKIYCLCGDGDLQEGISYEACSLAGLHKLDNFILIYDSNNISIEGDVGLAF-NENVKMRFEAQGFEV 209 (632)
T ss_dssp HHHHHHHCTTTCCCCEEEEEEHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHHHTTCEE
T ss_pred HhhccccccCCCCCeEEEEECCcchhhccHHHHHHHHHHcCCCcEEEEEECCCcccccchhhhc-ChhHHHHHHHcCCeE
Confidence 87643 8899999999999999999999999999995 89999999999998876554 578999999999999
Q ss_pred EEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEecCCCCCCCCCC
Q 019498 192 IRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDS 238 (340)
Q Consensus 192 ~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~~gHs~~dd~ 238 (340)
++|||||++++.+|+++|.+ .++|+||+++|+|.+||+...++
T Consensus 210 ~~vdGhd~~~l~~al~~A~~----~~~P~lI~v~T~kG~G~~~~e~~ 252 (632)
T 3l84_A 210 LSINGHDYEEINKALEQAKK----STKPCLIIAKTTIAKGAGELEGS 252 (632)
T ss_dssp EEEETTCHHHHHHHHHHHHT----CSSCEEEEEECCTTTTCGGGTTC
T ss_pred EEEeeCCHHHHHHHHHHHHh----CCCCEEEEEeeEeeecCCCCCCc
Confidence 99999999999999987764 68999999999999999865444
No 18
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=99.96 E-value=6.8e-29 Score=257.12 Aligned_cols=195 Identities=22% Similarity=0.170 Sum_probs=161.5
Q ss_pred CcE-EEc-cCcc---HHHHHHcCC--CHHHHHHHhhcCCCCCCCCCccccccCCC-CCCccccCccccchhhHHHHHHHH
Q 019498 47 DDF-VVP-QYRE---PGVLLWRGF--SMQEFANQCFGNKADYGKGRQMPIHYGSN-KHNYFTVSSTIATQLPHAVGAAYA 118 (340)
Q Consensus 47 ~D~-~~~-~yR~---~~~~l~~G~--~~~~~~~~~~~~~~~~~~G~~~~~h~~~~-~~~~~~~~g~lG~~lp~A~G~A~a 118 (340)
.|. |++ .|-+ +++++..|. .+.+-|..++.. |+..++|+... .+++..++|+||+++|.|+|+|+|
T Consensus 69 rDr~vls~GH~~~~lYa~l~l~G~~~~~~~~l~~~r~~------~~~~~ghp~~~~~~~~~~~~G~lG~gl~~AvG~AlA 142 (675)
T 1itz_A 69 RDRFVLSAGHGCMLQYALLHLAGYDSVKEEDLKQFRQW------GSRTPGHPENFETPGVEVTTGPLGQGIANAVGLALA 142 (675)
T ss_dssp CCEEEESSGGGHHHHHHHHHHHTCTTCCHHHHTTTTST------TCSSCSSCCTTTCTTCCSCCCSTTHHHHHHHHHHHH
T ss_pred CCeEEEcCcchHHHHHHHHHHcCCCCCCHHHHHhcccC------CCCCCCCCCCCCCCCeeECCccHHhHHHHHHHHHHH
Confidence 364 434 5777 566677787 455556666653 55567887753 468888999999999999999999
Q ss_pred hhhcC----------CCCeEEEEECCcccCcchHHHHHHHHHhCCC-CEEEEEEeCCccccccccCccCccchhhhhhhc
Q 019498 119 LKMDR----------KDACAVTYFGDGGTSEGDFHAALNFSAVTEA-PVIFICRNNGWAISTPISDQFRSDGAVVKGRAY 187 (340)
Q Consensus 119 ~k~~~----------~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~L-pvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~ 187 (340)
.++.+ ++++|+|++|||++++|++||+|++|++++| |+|+||+||+|++++++.... ..|+.+++++|
T Consensus 143 ~~~~~~~~n~~~~~~~~~~v~~i~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~ 221 (675)
T 1itz_A 143 EKHLAARFNKPDSEIVDHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAF-TEDVSTRFEAL 221 (675)
T ss_dssp HHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CSCHHHHHHHT
T ss_pred hhhhcccccccccCCCCCEEEEEECHhHhchhHHHHHHHHHHHhCCCcEEEEEECCCccCCCChhhhc-ChhHHHHHHhC
Confidence 98765 7899999999999999999999999999999 799999999999998877655 67899999999
Q ss_pred CceEE-EEcCC-CHHHHHHHHHHHHHHhHccCCCEEEEEEEecCCCCCCCCCCCC----CCChHHHHHHH
Q 019498 188 GVRSI-RVDGN-DALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTK----YRPVDEIEWWR 251 (340)
Q Consensus 188 G~~~~-~VdG~-d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~~gHs~~dd~~~----Yr~~~e~~~~~ 251 (340)
||+++ .|||| |++++++|+++|.+ ..++|+||+++|+|.+||+..+++.. +.+++|++.++
T Consensus 222 G~~~~~~vdG~~d~~~l~~al~~a~~---~~~~P~lI~~~T~kg~G~~~~~~~~~~H~~~~~~e~~~~~~ 288 (675)
T 1itz_A 222 GWHTIWVKNGNTGYDDIRAAIKEAKA---VTDKPTLIKVTTTIGFGSPNKANSYSVHGSALGAKEVEATR 288 (675)
T ss_dssp TCEEEEESCTTTCHHHHHHHHHHHHH---CCSSCEEEEEECCTTTTCTTTTTSGGGTSSCCCHHHHHHHH
T ss_pred CCEEEEEecCCCCHHHHHHHHHHHHH---CCCCeEEEEEeeecccCcccccCcccccCCCCCHHHHHHHH
Confidence 99999 89999 99999999998875 25799999999999999986544432 45777777775
No 19
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=99.96 E-value=3.7e-29 Score=258.97 Aligned_cols=196 Identities=23% Similarity=0.235 Sum_probs=163.0
Q ss_pred CcE-EEc-cCcc---HHHHHHcCC-CHHHHHHHhhcCCCCCCCCCccccccCCC-CCCccccCccccchhhHHHHHHHHh
Q 019498 47 DDF-VVP-QYRE---PGVLLWRGF-SMQEFANQCFGNKADYGKGRQMPIHYGSN-KHNYFTVSSTIATQLPHAVGAAYAL 119 (340)
Q Consensus 47 ~D~-~~~-~yR~---~~~~l~~G~-~~~~~~~~~~~~~~~~~~G~~~~~h~~~~-~~~~~~~~g~lG~~lp~A~G~A~a~ 119 (340)
.|. |++ .|-+ .++++..|. .+.+-|.+++.. |+..++|+... .+++...+|+||+++|.|+|+|+|.
T Consensus 57 rDr~v~s~GH~~~~lYa~~~l~G~~~~~~~l~~~r~~------~~~~~ghp~~~~~~g~~~~~G~lG~gl~~AvG~AlA~ 130 (669)
T 2r8o_A 57 RDRFVLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQL------HSKTPGHPEVGYTAGVETTTGPLGQGIANAVGMAIAE 130 (669)
T ss_dssp CCEEEESSGGGHHHHHHHHHHHTCSCCHHHHTTTTST------TCSCCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHH
T ss_pred CCeEEEeCccHHHHHHHHHHHcCCCCCHHHHHHhhcC------CCCCCCCCCccCCCCcccccccccchHHHHHHHHHHH
Confidence 464 444 4777 566667786 445556666653 55557787643 4688889999999999999999999
Q ss_pred hhcC----------CCCeEEEEECCcccCcchHHHHHHHHHhCCCC-EEEEEEeCCccccccccCccCccchhhhhhhcC
Q 019498 120 KMDR----------KDACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 188 (340)
Q Consensus 120 k~~~----------~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lp-vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G 188 (340)
++.+ .+++|+|++|||++++|++||+|++|+.++|| +|+||+||+|++++++.... ..++.+++++||
T Consensus 131 ~~~~~~~n~~~~~~~~~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G 209 (669)
T 2r8o_A 131 KTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGWF-TDDTAMRFEAYG 209 (669)
T ss_dssp HHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHHHTT
T ss_pred HHhccccccCccCCcCCeEEEEECHhHhcchHHHHHHHHHHHcCCCcEEEEEECCCcEecccccccc-CccHHHHHHHCC
Confidence 8653 37899999999999999999999999999996 99999999999998876554 578999999999
Q ss_pred ceEE-EEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEecCCCCCC-CCCC---CCCCChHHHHHHHh
Q 019498 189 VRSI-RVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTT-SDDS---TKYRPVDEIEWWRT 252 (340)
Q Consensus 189 ~~~~-~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~~gHs~-~dd~---~~Yr~~~e~~~~~~ 252 (340)
|+++ +|||||++++++++++|.+ ..++|+||+++|+|..||+. .+++ ..||+++|++.|++
T Consensus 210 ~~~~~~vdG~d~~~l~~al~~a~~---~~~~P~lI~~~T~kg~G~~~~~~~~~~H~~~~~~ee~~~~~~ 275 (669)
T 2r8o_A 210 WHVIRDIDGHDAASIKRAVEEARA---VTDKPSLLMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTRE 275 (669)
T ss_dssp CEEEEEEETTCHHHHHHHHHHHHH---CCSSCEEEEEECCTTTTCTTTTTSGGGTSSCCCHHHHHHHHH
T ss_pred CeEEeEECCCCHHHHHHHHHHHHh---cCCCCEEEEEEeEeccCcCCcCCCCcccCCCCCHHHHHHHHH
Confidence 9999 9999999999999998875 35799999999999999995 4443 57999999999873
No 20
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=99.96 E-value=1.7e-28 Score=253.56 Aligned_cols=195 Identities=24% Similarity=0.265 Sum_probs=157.3
Q ss_pred CCcE-EEc-cCcc---HHHHHHcCC-CHHHHHHHhhcCCCCCCCCCccccccCC-CCCCccccCccccchhhHHHHHHHH
Q 019498 46 NDDF-VVP-QYRE---PGVLLWRGF-SMQEFANQCFGNKADYGKGRQMPIHYGS-NKHNYFTVSSTIATQLPHAVGAAYA 118 (340)
Q Consensus 46 ~~D~-~~~-~yR~---~~~~l~~G~-~~~~~~~~~~~~~~~~~~G~~~~~h~~~-~~~~~~~~~g~lG~~lp~A~G~A~a 118 (340)
+.|. |++ .|-+ .++++..|+ .+.+-|.+++.. |+..++|+.. ..+++..++|+||+++|.|+|+|+|
T Consensus 82 ~rDrfvls~GH~~~~lYa~l~l~G~~~~~~~l~~~rq~------gs~~~Ghp~~~~~pgv~~~tG~lG~gl~~AvG~AlA 155 (690)
T 3m49_A 82 NRDRFVLSAGHGSMLLYSLLHLSGYDVTMDDLKNFRQW------GSKTPGHPEYGHTAGVDATTGPLGQGIATAVGMAMA 155 (690)
T ss_dssp TSCEEEESSGGGHHHHHHHHHHTTSSCCHHHHTTTTCT------TCSSCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHH
T ss_pred CCCeEEECCccHHHHHHHHHHHHCCCCCHHHHHhhccC------CCCCCCCCCCCCCCccccCCccccccHHHHHHHHHH
Confidence 3574 444 4766 356667886 455556667653 6667788875 3568888999999999999999999
Q ss_pred hhhcCC----------CCeEEEEECCcccCcchHHHHHHHHHhCCCC-EEEEEEeCCccccccccCccCccchhhhhhhc
Q 019498 119 LKMDRK----------DACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAY 187 (340)
Q Consensus 119 ~k~~~~----------~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lp-vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~ 187 (340)
.++.+. +++|+|++|||++++|++||++++|++++|| +|+|++||+|+++++..... ..|+.+++++|
T Consensus 156 ~~~~~~~~n~~~~~~~d~~v~~i~GDG~l~eG~~~Eal~~A~~~~L~~livI~dnN~~~i~~~~~~~~-~~d~~~~~~a~ 234 (690)
T 3m49_A 156 ERHLAAKYNRDAYNIVDHYTYAICGDGDLMEGVSAEASSLAAHLQLGRLVVLYDSNDISLDGDLNRSF-SESVEDRYKAY 234 (690)
T ss_dssp HHHHHHHHCBTTBCCSCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSBCSSSBGGGTC-CCCHHHHHHHH
T ss_pred HHHhhccccccccccCCCeEEEEECchhhhhccHHHHHHHHHHhCCCeEEEEEECCCeecccchhhcc-chhHHHHHHHc
Confidence 987542 7899999999999999999999999999995 89999999999998876543 57899999999
Q ss_pred CceEEEE-cCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEecCCCCCCCCCCCCCC----ChHHHHHH
Q 019498 188 GVRSIRV-DGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYR----PVDEIEWW 250 (340)
Q Consensus 188 G~~~~~V-dG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~~gHs~~dd~~~Yr----~~~e~~~~ 250 (340)
||++++| ||||++++.+|+++|.+ ..++|+||+++|+|.+|++..+++..|. +++|++..
T Consensus 235 G~~~~~v~DG~d~~~l~~Al~~a~~---~~~~P~lI~v~T~kG~G~~~~~~~~~~Hg~~~~~e~~~~~ 299 (690)
T 3m49_A 235 GWQVIRVEDGNDIEAIAKAIEEAKA---DEKRPTLIEVRTTIGFGSPNKSGKSASHGSPLGVEETKLT 299 (690)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHHHH---CCSSCEEEEEECCTTTTCTTTTTSGGGTSSCCCHHHHHHH
T ss_pred CCcEEEEecCCCHHHHHHHHHHHHh---cCCCCEEEEEEeecccccCcccCcccccCCCCCHHHHHHH
Confidence 9999999 99999999999887764 2689999999999999998665554333 34555544
No 21
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=99.96 E-value=6.6e-29 Score=255.69 Aligned_cols=197 Identities=17% Similarity=0.150 Sum_probs=152.6
Q ss_pred ccccccCCchHHHHHHHHHccC-CCcEEEccCccHH---HHHHcCCCHHHHHHHhhcCCCCCCCCCccccccCCC-CCCc
Q 019498 24 ISFYLTTSGEEAINIASAAAIK-NDDFVVPQYREPG---VLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSN-KHNY 98 (340)
Q Consensus 24 ~~~~~~~~G~Ea~~~~~~~al~-~~D~~~~~yR~~~---~~l~~G~~~~~~~~~~~~~~~~~~~G~~~~~h~~~~-~~~~ 98 (340)
.+++++++|+-.+..++-..++ +.|+++.. |||+ +.+..|. .+.+..++.. ++ .++|+... .++.
T Consensus 49 ~Gh~~~~lg~v~l~~aL~~~~~~~~D~~v~~-~GH~~y~~~~l~G~--~~~~~~~r~~------~g-~~G~p~~~~s~~~ 118 (629)
T 2o1x_A 49 GLHLASSLGAVDIITALHYVLDSPRDRILFD-VGHQAYAHKILTGR--RDQMADIKKE------GG-ISGFTKVSESEHD 118 (629)
T ss_dssp SSCHHHHHHTHHHHHHHHHHSCTTTSEEEES-SSTTCHHHHHTTTT--GGGGGGTTST------TS-CCSSCCGGGCTTC
T ss_pred CCcCCCchhHHHHHHHHHhhcCCCCCeEEec-CchHHHHHHHHhCc--HhHHhCcccC------CC-CCCCCCCCCCCCC
Confidence 4788889998555444444457 79998888 8885 6777786 1222322221 11 23343321 2355
Q ss_pred cccCccccchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccccccCccC--
Q 019498 99 FTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFR-- 176 (340)
Q Consensus 99 ~~~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~-- 176 (340)
...+|++|+++|+|+|+|+|.|+++++++|||++|||++++|++||+|++|+++++|+|+||+||+|+++++...+..
T Consensus 119 ~~~~G~~G~gl~~AvG~AlA~k~~~~~~~Vv~v~GDG~~~~G~~~EaL~~A~~~~~pli~IvnnN~~~i~~~~~~~~~~~ 198 (629)
T 2o1x_A 119 AITVGHASTSLTNALGMALARDAQGKDFHVAAVIGDGSLTGGMALAALNTIGDMGRKMLIVLNDNEMSISENVGAMNKFM 198 (629)
T ss_dssp CSCCSSSSCHHHHHHHHHHHHHHHTCCCCEEEEEETTGGGSHHHHHHHHHHHHHCCSEEEEEEECSBSSSBCCSSHHHHC
T ss_pred CcCCCcccccHhHHHHHHHHHHHhCCCCeEEEEEchhhhhccHHHHHHHHHHhhCCCEEEEEECCCCCCCCChhHHHHHH
Confidence 677899999999999999999999999999999999999999999999999999999999999999999876542110
Q ss_pred ------------------------c---------cch-------h--hhhhhcCceEE-EEcCCCHHHHHHHHHHHHHHh
Q 019498 177 ------------------------S---------DGA-------V--VKGRAYGVRSI-RVDGNDALAIYSAVHAAREMA 213 (340)
Q Consensus 177 ------------------------~---------~~~-------~--~~a~a~G~~~~-~VdG~d~~~v~~a~~~a~~~~ 213 (340)
. .++ . .++++|||+++ +|||||++++.+++++|.+
T Consensus 199 ~~l~~~~~y~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~~~~~p~~~~~~ea~G~~~~g~vdG~d~~~l~~al~~A~~-- 276 (629)
T 2o1x_A 199 RGLQVQKWFQEGEGAGKKAVEAVSKPLADFMSRAKNSTRHFFDPASVNPFAAMGVRYVGPVDGHNVQELVWLLERLVD-- 276 (629)
T ss_dssp ---------------------------------------------CCCTTGGGTCEEEEEEESSCHHHHHHHHHHHTT--
T ss_pred HHHhhchhHHHHHHHHHHHHhccchHHHHHHHHHHHHHHhhcCcccchHHHhcCCeEEeeECCcCHHHHHHHHHHHHh--
Confidence 0 032 3 78999999999 9999999999999988754
Q ss_pred HccCCCEEEEEEEecCCCCCC
Q 019498 214 IGEGRPILIEALTYRVGHHTT 234 (340)
Q Consensus 214 r~~~~P~lIe~~t~R~~gHs~ 234 (340)
.++|+||+++|+|.+||+.
T Consensus 277 --~~~P~lI~v~t~kg~G~~~ 295 (629)
T 2o1x_A 277 --LDGPTILHIVTTKGKGLSY 295 (629)
T ss_dssp --SSSEEEEEEECCTTTTCHH
T ss_pred --cCCCEEEEEEEecCCCCCh
Confidence 5799999999999999973
No 22
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A*
Probab=99.94 E-value=2.1e-26 Score=242.99 Aligned_cols=200 Identities=18% Similarity=0.166 Sum_probs=160.2
Q ss_pred CCcEEEc-cCcc---HHHHHHcCCCHHHHHHHhhcCCCCCCCCCccccccCCC-CCC-ccccCccccchhhHHHHHHHHh
Q 019498 46 NDDFVVP-QYRE---PGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSN-KHN-YFTVSSTIATQLPHAVGAAYAL 119 (340)
Q Consensus 46 ~~D~~~~-~yR~---~~~~l~~G~~~~~~~~~~~~~~~~~~~G~~~~~h~~~~-~~~-~~~~~g~lG~~lp~A~G~A~a~ 119 (340)
+.|+|+. .|-+ +++++..|...++-|..|+... .+++++.|+... .++ +..++|++|.+++.|+|+|++.
T Consensus 133 ~~D~V~~~GH~sp~~Ya~~~l~Gr~~~e~l~~fRq~~----~~~gl~~~p~~~~~p~~~~~~tG~~G~g~s~AiG~A~a~ 208 (886)
T 2qtc_A 133 GGDLVYFQGHISPGVYARAFLEGRLTQEQLDNFRQEV----HGNGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFL 208 (886)
T ss_dssp CCCEEECCGGGHHHHHHHHHHTTSSCHHHHTTBTCCT----TSSCBCSSCCTTTSTTTCCCCCCSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEcchhHHHHHHHHHHhCCCCHHHHHhccCCC----CCCCCCCCCCcccCCCcccccccccCccHHHHHHHHHHh
Confidence 4687766 4777 5677788976667777777532 135677776653 234 7778999999999999999999
Q ss_pred hh-------cCCCCeEEEEECCcccCcchHHHHHHHHHhCCC-CEEEEEEeCCccccccccCcc-CccchhhhhhhcCce
Q 019498 120 KM-------DRKDACAVTYFGDGGTSEGDFHAALNFSAVTEA-PVIFICRNNGWAISTPISDQF-RSDGAVVKGRAYGVR 190 (340)
Q Consensus 120 k~-------~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~L-pvi~vv~nN~~~~~~~~~~~~-~~~~~~~~a~a~G~~ 190 (340)
|+ ++.+++|+|++|||++++|++||+||+|+.++| |+||||+||+++++++..... ...++.++++++||+
T Consensus 209 ~~l~~~~~~~~~~~~v~aviGDG~l~eG~~~EAl~~A~~~~L~nli~Vvn~N~~si~~~v~~~~~~~~~l~~~~~~~G~~ 288 (886)
T 2qtc_A 209 KYLEHRGLKDTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIINELEGIFEGAGWN 288 (886)
T ss_dssp HHHHHTTSCCCTTCCEEEEEETGGGGSHHHHTTHHHHHHTTCTTEEEEEEECSBCSSSBSCTTSCHHHHHHHHHHHTTCE
T ss_pred hhhcccccccCCCCEEEEEECCccccccchHHHHHHHHHcCCCcEEEEEECCCcccCCCccccccccHHHHHHHHhCCCC
Confidence 98 778999999999999999999999999999999 699999999999998877532 346789999999999
Q ss_pred EEEE---------------------------------------------------------------------cCCCHHH
Q 019498 191 SIRV---------------------------------------------------------------------DGNDALA 201 (340)
Q Consensus 191 ~~~V---------------------------------------------------------------------dG~d~~~ 201 (340)
+++| ||||+.+
T Consensus 289 ~~~v~~g~~~~~ll~~~~~~~l~~~~~~~~d~~~q~~~~~~g~~~r~~~F~~~~~~~~l~~~~~d~~i~~l~~dGhD~~~ 368 (886)
T 2qtc_A 289 VIKVMWGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYVREHFFGKYPETAALVADWTDEQIWALNRGGHDPKK 368 (886)
T ss_dssp EEEECBCTTHHHHHHHCSSCHHHHHHHHCCHHHHHHHTTSCHHHHHHHTSTTSHHHHTTTTTCCHHHHHTCCBGGGCHHH
T ss_pred EEEEecchhHHHHHccCCchHHHHHHHhccchhhhhhhhccchHHHHhhcccchHHHHHHhhcChhhHhhcccCCCCHHH
Confidence 9998 6999999
Q ss_pred HHHHHHHHHHHhHccCCCEEEEEEEecCCCCCC--CCCCC----CCCChHHHHHHHh
Q 019498 202 IYSAVHAAREMAIGEGRPILIEALTYRVGHHTT--SDDST----KYRPVDEIEWWRT 252 (340)
Q Consensus 202 v~~a~~~a~~~~r~~~~P~lIe~~t~R~~gHs~--~dd~~----~Yr~~~e~~~~~~ 252 (340)
|++|+++|.++ .++|+||+++|+|++||+. .++.. .|++.+|++.|++
T Consensus 369 l~~a~~~A~~~---~~~PtlI~~~T~KG~G~~~~~e~~~~~H~~~~l~~~~~~~~r~ 422 (886)
T 2qtc_A 369 IYAAFKKAQET---KGKATVILAHTIKGYGMGDAAKGKNIAHQVKKMNMDGVRHIRD 422 (886)
T ss_dssp HHHHHHHHHHC---CSSCEEEEEECCTTTTCTTCC-------------CHHHHHHHH
T ss_pred HHHHHHHHHHc---CCCCEEEEEeeeeccccchhhcCCccccCCCCCCHHHHHHHHH
Confidence 99999999863 4689999999999999973 22222 2788888888863
No 23
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=99.91 E-value=5.3e-25 Score=225.71 Aligned_cols=163 Identities=17% Similarity=0.216 Sum_probs=128.9
Q ss_pred CccccchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCC-cccccc----------
Q 019498 102 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNG-WAISTP---------- 170 (340)
Q Consensus 102 ~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~-~~~~~~---------- 170 (340)
.|+||+++|.|+|++++. ++++|||++|||+++++ +++|++|+++++|+++||.||+ |++...
T Consensus 419 ~g~~G~~l~~A~Gaala~----~~~~vv~~~GDG~~~~~--~~~l~~a~~~~lp~~~vv~nN~~~~~~~~~~~~~~~~~~ 492 (603)
T 4feg_A 419 FATMGVGIPGAIAAKLNY----PERQVFNLAGDGGASMT--MQDLATQVQYHLPVINVVFTNCQYGFIKDEQEDTNQNDF 492 (603)
T ss_dssp SCCTTCHHHHHHHHHHHC----TTSCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHHHHHCSSCC
T ss_pred cccccchhHHHhhHHHhC----CCCcEEEEeccHHHhhh--HHHHHHHHHHCcCeEEEEEECCchHHHHHHHHHhcCCCc
Confidence 579999999999999885 68899999999999865 7779999999999888876665 876321
Q ss_pred ccCccCccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEE---ecCCCCCCCCCCCCCCChH--
Q 019498 171 ISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT---YRVGHHTTSDDSTKYRPVD-- 245 (340)
Q Consensus 171 ~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t---~R~~gHs~~dd~~~Yr~~~-- 245 (340)
........|+.++|++||+++++|+ +++++.+++++|++ .+.+||+|||+.| +|..+|.+.|++..||..+
T Consensus 493 ~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~--~~~~gP~lIev~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (603)
T 4feg_A 493 IGVEFNDIDFSKIADGVHMQAFRVN--KIEQLPDVFEQAKA--IAQHEPVLIDAVITGDRPLPAEKLRLDSAMSSAADIE 568 (603)
T ss_dssp CSSBCCCCCHHHHHHHTTCEEEEEC--BGGGHHHHHHHHHH--HTTTSCEEEEEECCCCCCCCTTSCCCCTTTSCHHHHH
T ss_pred ccCcCCCCCHHHHHHHCCCeEEEEC--CHHHHHHHHHHHHH--hcCCCcEEEEEEeCCCCCCCcccchhhhhhhhHHHHH
Confidence 1112245689999999999999999 77788888887762 1468999999999 5567898889999998665
Q ss_pred HHHHHHhCCChHHHHHHHHHHCCCCCHHHH
Q 019498 246 EIEWWRTTQDPVTRFRKWIESNGWWNGDIE 275 (340)
Q Consensus 246 e~~~~~~~~dpi~~~~~~L~~~g~~~~~~~ 275 (340)
+...|+ ++||+++|+++|.++|+|++++.
T Consensus 569 ~~~~~~-~~d~~~~~~~~l~~~g~~~~~~~ 597 (603)
T 4feg_A 569 AFKQRY-EAQDLQPLSTYLKQFGLDDLQHQ 597 (603)
T ss_dssp HHHHHH-TCTTCCCHHHHHHHTTC------
T ss_pred HHHhhC-CcccCCchHHHHHHcCCchhhhh
Confidence 556665 58999999999999999998764
No 24
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=99.80 E-value=2e-19 Score=187.37 Aligned_cols=140 Identities=20% Similarity=0.211 Sum_probs=123.6
Q ss_pred cccccCCCCCCccccCccccchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcch---HHHHHHHHHhCCC-CEEEEEEe
Q 019498 87 MPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGD---FHAALNFSAVTEA-PVIFICRN 162 (340)
Q Consensus 87 ~~~h~~~~~~~~~~~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~---~~Eal~~A~~~~L-pvi~vv~n 162 (340)
+++|+....+|+...+|+||+|++.|+|+|+ .+++..|+|++|||+.++|. .||+.+++..+++ +++.|+++
T Consensus 159 ~pgHp~~~tpGve~~tG~LGqGls~AvG~A~----~~~~~~v~~~~GDGe~e~GsLAg~wea~~~~~~~~l~nl~~i~D~ 234 (845)
T 3ahc_A 159 IPSHFAPETPGSIHEGGELGYALSHAYGAVM----NNPSLFVPCIIGDGEAETGPLATGWQSNKLVNPRTDGIVLPILHL 234 (845)
T ss_dssp BCSSCCTTSTTCSCCCSSTTCHHHHHHHHHT----TCTTCEEEEEEETTGGGSHHHHHHGGGGGSCCTTTSCEEEEEEEE
T ss_pred CCCCCCCCCCCeecCCCCccchHhHHhhhhh----cCCCCeEEEEECCCchhhhcchhhhHHhhhhhhhcCCCEEEEEEC
Confidence 8899876678999999999999999999995 46889999999999999999 9999999999999 89999999
Q ss_pred CCccccccccCc-cCccchhhhhhhcCceEE-EEcC-C--CHHHHHHHHHHHHHH-----------hHc--cCCC--EEE
Q 019498 163 NGWAISTPISDQ-FRSDGAVVKGRAYGVRSI-RVDG-N--DALAIYSAVHAAREM-----------AIG--EGRP--ILI 222 (340)
Q Consensus 163 N~~~~~~~~~~~-~~~~~~~~~a~a~G~~~~-~VdG-~--d~~~v~~a~~~a~~~-----------~r~--~~~P--~lI 222 (340)
|+++|+.++... .+..++.+++++|||.++ .||| | |++++..++.+|++. +|+ .++| ++|
T Consensus 235 N~~~i~g~t~l~~~~~e~l~~rf~a~Gw~v~~~vdG~~~~D~~~i~~a~~~al~~~~~~i~~i~~~A~~~~~~kP~w~~I 314 (845)
T 3ahc_A 235 NGYKIANPTILARISDEELHDFFRGMGYHPYEFVAGFDNEDHMSIHRRFAELFETIFDEICDIKAAAQTDDMTRPFYPML 314 (845)
T ss_dssp CSBSSSSBCHHHHSCHHHHHHHHHHTTEEEEEEECSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCCEEEE
T ss_pred CCCcCCCCccccccCcHHHHHHHHHCCCEEeEEeCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCeEE
Confidence 999999888632 346789999999999999 8999 9 999999998766632 344 3689 999
Q ss_pred EEEEecCC
Q 019498 223 EALTYRVG 230 (340)
Q Consensus 223 e~~t~R~~ 230 (340)
.++|.+.+
T Consensus 315 i~rT~kG~ 322 (845)
T 3ahc_A 315 IFRTPKGW 322 (845)
T ss_dssp EEECCTTT
T ss_pred EEECcccC
Confidence 99999999
No 25
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=99.73 E-value=9.9e-18 Score=171.31 Aligned_cols=157 Identities=16% Similarity=0.154 Sum_probs=116.3
Q ss_pred CCHHHHHHHhhcCCCCC---CCCCcc-----ccccCCC-CCCccc--cCccccchhhHHHHHHHHhhhcCCCCeEEEEEC
Q 019498 65 FSMQEFANQCFGNKADY---GKGRQM-----PIHYGSN-KHNYFT--VSSTIATQLPHAVGAAYALKMDRKDACAVTYFG 133 (340)
Q Consensus 65 ~~~~~~~~~~~~~~~~~---~~G~~~-----~~h~~~~-~~~~~~--~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~G 133 (340)
+++..++..+....++. +.+.+. ..++... ...++. ..|+||+++|.|+|+|+|. ++++|||++|
T Consensus 364 ~~~~~~~~~l~~~l~~~~ivv~d~G~~~~~~~~~~~~~~~~~~~~~~~~g~mG~~l~~AiGaala~----~~~~vv~i~G 439 (590)
T 1v5e_A 364 LQFYQVYNAINNHADEDAIYSIDVGNSTQTSIRHLHMTPKNMWRTSPLFATMGIAIPGGLGAKNTY----PDRQVWNIIG 439 (590)
T ss_dssp CCHHHHHHHHHHHSCTTCEEEECSSHHHHGGGGTCCCCTTSEEECCCSSCCTTCHHHHHHHHHHHC----TTSCEEEEEE
T ss_pred cCHHHHHHHHHhhCCCCCEEEECCchHHHHHHHhcccCCCCeEEcCCCCCcccChHHHHHHHHHhC----CCCeEEEEEe
Confidence 56777777666554431 112211 1122222 233444 3689999999999999985 6789999999
Q ss_pred CcccCcchHHHHHHHHHhCCCCEEEEEE-eCCccccccccCc---------cCccchhhhhhhcCceEEEEcCCCHHHHH
Q 019498 134 DGGTSEGDFHAALNFSAVTEAPVIFICR-NNGWAISTPISDQ---------FRSDGAVVKGRAYGVRSIRVDGNDALAIY 203 (340)
Q Consensus 134 DG~~~~G~~~Eal~~A~~~~Lpvi~vv~-nN~~~~~~~~~~~---------~~~~~~~~~a~a~G~~~~~VdG~d~~~v~ 203 (340)
||+|+++ +++|++|+++++|+++||. ||+|++....+.. ....|+.++|++||+++++|+ +++++.
T Consensus 440 DG~~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~q~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~ 515 (590)
T 1v5e_A 440 DGAFSMT--YPDVVTNVRYNMPVINVVFSNTEYAFIKNKYEDTNKNLFGVDFTDVDYAKIAEAQGAKGFTVS--RIEDMD 515 (590)
T ss_dssp HHHHHHH--GGGHHHHHHTTCCCEEEEEECSSCTTGGGTTSSSCCSCCCCCCCCCCHHHHHHHTTSEEEEEC--BHHHHH
T ss_pred chHHhch--HHHHHHHHHhCCCCEEEEEECCchHHHHHHHHHhcCCCccccCCCCCHHHHHHHcCCEEEEEC--CHHHHH
Confidence 9999865 6889999999999866664 5578887543221 234689999999999999999 899999
Q ss_pred HHHHHHHHHhHccCCCEEEEEEEecCC
Q 019498 204 SAVHAAREMAIGEGRPILIEALTYRVG 230 (340)
Q Consensus 204 ~a~~~a~~~~r~~~~P~lIe~~t~R~~ 230 (340)
+++++|++..|+ ++|+|||+.|+|..
T Consensus 516 ~al~~a~~~~~~-~gp~liev~~~~~~ 541 (590)
T 1v5e_A 516 RVMAEAVAANKA-GHTVVIDCKITQDR 541 (590)
T ss_dssp HHHHHHHHHHHT-TCCEEEEEECCSCC
T ss_pred HHHHHHHHhcCC-CCCEEEEEEecccc
Confidence 999999876554 79999999998754
No 26
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=99.72 E-value=7.3e-18 Score=173.07 Aligned_cols=121 Identities=21% Similarity=0.193 Sum_probs=100.3
Q ss_pred CccccchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeC-Ccccccccc--------
Q 019498 102 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNN-GWAISTPIS-------- 172 (340)
Q Consensus 102 ~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN-~~~~~~~~~-------- 172 (340)
+|++|+++|.|+|+|+|. ++++|||++|||+|+++ +++|++|+++++|+++||.|| +|++....+
T Consensus 441 ~G~~G~~l~~AiGaala~----~~~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~~ 514 (616)
T 2pan_A 441 AGPLGWTIPAALGVCAAD----PKRNVVAISGDFDFQFL--IEELAVGAQFNIPYIHVLVNNAYLGLIRQSQRAFDMDYC 514 (616)
T ss_dssp TCCTTCHHHHHHHHHHHC----TTCEEEEEEEHHHHHHT--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHGGGGTCCCS
T ss_pred cccccchHHHHHHHHHhC----CCCcEEEEEcchhhhCC--HHHHHHHHHhCCCeEEEEEECCcchHHHHHHHHhcCCcc
Confidence 589999999999999985 57899999999999864 678999999999986666555 587653211
Q ss_pred ------C--ccC----ccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEecCC
Q 019498 173 ------D--QFR----SDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 230 (340)
Q Consensus 173 ------~--~~~----~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~~ 230 (340)
. ... ..|+.++|++||+++++|+ +++++.+++++|++++|+.++|+|||+.|.|..
T Consensus 515 ~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~~~~~~~gp~lIev~~~~~~ 582 (616)
T 2pan_A 515 VQLAFENINSSEVNGYGVDHVKVAEGLGCKAIRVF--KPEDIAPAFEQAKALMAQYRVPVVVEVILERVT 582 (616)
T ss_dssp CBCCCCCTTCGGGTTCCCCHHHHHHHTTCEEEEEC--SGGGHHHHHHHHHHHHHHHCSCEEEEEEBCSCC
T ss_pred ccccccccccccCCCCCCCHHHHHHHcCCeEEEEC--CHHHHHHHHHHHHhhcccCCCcEEEEEEecccc
Confidence 1 111 2689999999999999998 789999999999987776789999999998865
No 27
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=99.70 E-value=1.6e-17 Score=168.71 Aligned_cols=117 Identities=18% Similarity=0.239 Sum_probs=97.3
Q ss_pred CccccchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEE-EeCCcccccccc-------C
Q 019498 102 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPIS-------D 173 (340)
Q Consensus 102 ~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv-~nN~~~~~~~~~-------~ 173 (340)
.|+||+++|.|+|+|+|.| +++++|||++|||+++++ +++|++|.++++|+++|| +||+|++....+ .
T Consensus 418 ~g~~G~~l~~AiGaa~a~~--~~~~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~ 493 (563)
T 2uz1_A 418 LGSMGVGFGTALGAQVADL--EAGRRTILVTGDGSVGYS--IGEFDTLVRKQLPLIVIIMNNQSWGATLHFQQLAVGPNR 493 (563)
T ss_dssp TCCTTTHHHHHHHHHHHHH--HHTCEEEEEEEHHHHGGG--TTHHHHHHHHTCCCEEEEEECSBCHHHHHHHHHHTCTTC
T ss_pred CccccChHHHHHHHHHHhh--CCCCeEEEEEccHHHhCC--HHHHHHHHHhCCCeEEEEEeCCcchHHHHHHHHhcCCCc
Confidence 5899999999999999976 568899999999999875 578999999999986665 555688765321 1
Q ss_pred c----cCccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEec
Q 019498 174 Q----FRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 228 (340)
Q Consensus 174 ~----~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R 228 (340)
. ....|+.+++++||+++++|+ +++++.+++++|++ .++|+|||+.|++
T Consensus 494 ~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~----~~gp~liev~~~~ 546 (563)
T 2uz1_A 494 VTGTRLENGSYHGVAAAFGADGYHVD--SVESFSAALAQALA----HNRPACINVAVAL 546 (563)
T ss_dssp CCSCBCCCCCHHHHHHHTTCEEEEEC--SHHHHHHHHHHHHH----SSSCEEEEEECCS
T ss_pred ccCCcCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHH----CCCCEEEEEEecc
Confidence 1 134689999999999999998 89999999998875 5899999999963
No 28
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=99.70 E-value=1.6e-17 Score=168.98 Aligned_cols=116 Identities=20% Similarity=0.263 Sum_probs=96.4
Q ss_pred CccccchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeC-Ccccccccc--------
Q 019498 102 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNN-GWAISTPIS-------- 172 (340)
Q Consensus 102 ~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN-~~~~~~~~~-------- 172 (340)
.|+||+++|.|+|+|+|. ++++|||++|||++++ .+++|++|.++++|+++||.|| +|++....+
T Consensus 419 ~g~mG~~l~~AiGaala~----~~~~vv~i~GDG~~~~--~~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~ 492 (566)
T 1ozh_A 419 QQTMGVALPWAIGAWLVN----PERKVVSVSGDGGFLQ--SSMELETAVRLKANVLHLIWVDNGYNMVAIQEEKKYQRLS 492 (566)
T ss_dssp TCCTTCHHHHHHHHHHHS----TTSEEEEEEEHHHHHH--HTTHHHHHHHHTCCEEEEEEECSBCHHHHHHHHHHHSSCC
T ss_pred cccccchHHHHHHHHHhC----CCCCEEEEEcChHHhc--cHHHHHHHHHhCCCcEEEEEECCchhHHHHHHHHhcCCCc
Confidence 589999999999999986 5789999999999986 4678999999999987666555 687764321
Q ss_pred -CccCccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEecC
Q 019498 173 -DQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRV 229 (340)
Q Consensus 173 -~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~ 229 (340)
......|+.++|++||+++++|+ +++++.++++++++ .++|+|||+.|+|.
T Consensus 493 ~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~gp~liev~~~~~ 544 (566)
T 1ozh_A 493 GVEFGPMDFKAYAESFGAKGFAVE--SAEALEPTLRAAMD----VDGPAVVAIPVDYR 544 (566)
T ss_dssp SCBCCCCCHHHHHHTTTSEEEECC--SGGGHHHHHHHHHH----SSSCEEEEEEBCCT
T ss_pred cCcCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHh----CCCCEEEEEEeCCC
Confidence 12234789999999999999998 78899999988875 68999999999763
No 29
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=99.70 E-value=1.4e-17 Score=167.85 Aligned_cols=115 Identities=23% Similarity=0.337 Sum_probs=95.4
Q ss_pred CccccchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeC-CccccccccC-------
Q 019498 102 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNN-GWAISTPISD------- 173 (340)
Q Consensus 102 ~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN-~~~~~~~~~~------- 173 (340)
.|+||+++|.|+|+++|. ++++|||++|||+|+++ +++|++|+++++|+++||.|| +|++.+..+.
T Consensus 400 gg~~G~~l~~A~G~a~a~----~~~~vv~~~GDG~~~~~--~~~l~~a~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~ 473 (528)
T 1q6z_A 400 AGGLGFALPAAIGVQLAE----PERQVIAVIGDGSANYS--ISALWTAAQYNIPTIFVIMNNGTYGALRWFAGVLEAENV 473 (528)
T ss_dssp TCCTTSHHHHHHHHHHHC----TTSCEEEEEEHHHHTTT--GGGHHHHHHHTCCCEEEEEECSBCHHHHHHHHHHTCCSC
T ss_pred CccccchHHHHHHHHHhC----CCCcEEEEECCcHHHhh--HHHHHHHHHhCCCeEEEEEeCCcchHhHHHHHHhcCCCc
Confidence 389999999999999985 57899999999999976 789999999999987777666 5887543211
Q ss_pred ---ccCccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEec
Q 019498 174 ---QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 228 (340)
Q Consensus 174 ---~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R 228 (340)
.....|+.+++++||+++++|+ +.+++.++++++++ .++|+|||+.|.|
T Consensus 474 ~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~----~~gp~liev~~~~ 525 (528)
T 1q6z_A 474 PGLDVPGIDFRALAKGYGVQALKAD--NLEQLKGSLQEALS----AKGPVLIEVSTVS 525 (528)
T ss_dssp CSCBCCCCCHHHHHHHHTCEEEEES--SHHHHHHHHHHHHT----CSSCEEEEEEBCC
T ss_pred ccCCCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHH----CCCcEEEEEEecC
Confidence 1134689999999999999999 77888888877764 6899999999965
No 30
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=99.69 E-value=1.1e-17 Score=169.87 Aligned_cols=120 Identities=15% Similarity=0.153 Sum_probs=98.0
Q ss_pred CccccchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeC-Ccccccccc------Cc
Q 019498 102 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNN-GWAISTPIS------DQ 174 (340)
Q Consensus 102 ~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN-~~~~~~~~~------~~ 174 (340)
.|+||+++|.|+|+|+|.+.++.+++|||++|||+|++ .+++|++|+++++|+++||.|| +|++..... ..
T Consensus 412 ~g~mG~~l~~A~Gaala~~~~~~~~~vv~~~GDG~~~~--~~~el~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~ 489 (563)
T 2vk8_A 412 WGSIGFTTGATLGAAFAAEEIDPKKRVILFIGDGSLQL--TVQEISTMIRWGLKPYLFVLNNDGYTIQKLIHGPKAQYNE 489 (563)
T ss_dssp TCCTTHHHHHHHHHHHHHHHHCTTCCEEEEEEHHHHHH--HGGGHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGGGC
T ss_pred hhhhhhHHHHHHHHHHhCcccCCCCCEEEEEcchHhhc--cHHHHHHHHHcCCCcEEEEEECCcchhhhhhhCCCCCccc
Confidence 68999999999999999988778899999999999985 4788999999999987666555 588754321 11
Q ss_pred cCccchhhhhhhcCce---EEEEcCCCHHHHHHHHH-HHHHHhHccCCCEEEEEEEec
Q 019498 175 FRSDGAVVKGRAYGVR---SIRVDGNDALAIYSAVH-AAREMAIGEGRPILIEALTYR 228 (340)
Q Consensus 175 ~~~~~~~~~a~a~G~~---~~~VdG~d~~~v~~a~~-~a~~~~r~~~~P~lIe~~t~R 228 (340)
....|+.++|++||++ +++|+ +++++.++++ ++++ ..++|+|||+.|++
T Consensus 490 ~~~~d~~~~a~a~G~~~~~~~~v~--~~~el~~al~~~a~~---~~~~p~liev~~~~ 542 (563)
T 2vk8_A 490 IQGWDHLSLLPTFGAKDYETHRVA--TTGEWDKLTQDKSFN---DNSKIRMIEVMLPV 542 (563)
T ss_dssp CCCCCGGGHHHHTTCSSEEEEEEC--BHHHHHHHHTCTTTT---SCSSEEEEEEECCT
T ss_pred CCCCCHHHHHHHhCCCCCcEEEec--CHHHHHHHHHHHHHh---CCCCcEEEEEEeCc
Confidence 2346899999999999 99999 7889988888 6653 23479999999964
No 31
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=99.69 E-value=3.4e-17 Score=167.30 Aligned_cols=156 Identities=18% Similarity=0.140 Sum_probs=113.8
Q ss_pred CCHHHHHHHhhcCCCCC---CCCCccc-----cccCCC-CCCcccc--CccccchhhHHHHHHHHhhhcCCCCeEEEEEC
Q 019498 65 FSMQEFANQCFGNKADY---GKGRQMP-----IHYGSN-KHNYFTV--SSTIATQLPHAVGAAYALKMDRKDACAVTYFG 133 (340)
Q Consensus 65 ~~~~~~~~~~~~~~~~~---~~G~~~~-----~h~~~~-~~~~~~~--~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~G 133 (340)
+++..++..+....+.. ..+.+.+ .++... ...++.+ .|+||+++|.|+|+++|. ++++|||++|
T Consensus 375 l~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~~~~g~g~mG~~l~~AiGaala~----~~~~vv~i~G 450 (589)
T 2pgn_A 375 ASMFRAMAEVRKVQRPEDIIVTDIGNHTLPMFGGAILQRPRRLVTSMAEGILGCGFPMALGAQLAE----PNSRVFLGTG 450 (589)
T ss_dssp CCHHHHHHHHHHTCCTTCEEEECSSTTHHHHHHHCCCSSTTCEESCTTTCCTTCHHHHHHHHHHHC----TTSCEEEEEE
T ss_pred cCHHHHHHHHHHhCCCCCEEEEcCchHHHHHHHhcccCCCCcEECCCCcchhhhHHHHHHHHHHhC----CCCcEEEEEe
Confidence 56677777766654431 1122211 122222 2344443 589999999999999985 5789999999
Q ss_pred CcccCcchHHHHHHHHHhCCCCEEEEEEeC-Ccccccccc---------CccCccchhhhhhhcCceEEEEcCCCHHHHH
Q 019498 134 DGGTSEGDFHAALNFSAVTEAPVIFICRNN-GWAISTPIS---------DQFRSDGAVVKGRAYGVRSIRVDGNDALAIY 203 (340)
Q Consensus 134 DG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN-~~~~~~~~~---------~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~ 203 (340)
||+|+++ +++|++|+++++|+++||.|| +|++....+ ......|+.+++++||+++++|+ +++++.
T Consensus 451 DG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~ 526 (589)
T 2pgn_A 451 DGALYYH--FNEFRVAVEHKLPVITMVFTNESYGANWTLMNHQFGQNNWTEFMNPDWVGIAKAFGAYGESVR--ETGDIA 526 (589)
T ss_dssp HHHHHHH--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHHHHHHSSCCSCBCCCCCHHHHHHHHTCEEEECT--TTCCHH
T ss_pred eHHHHhh--HHHHHHHHHhCCCeEEEEEECCCcccchHHHHhhcCCCccccCCCCCHHHHHHHCCCeEEEEC--CHHHHH
Confidence 9999864 689999999999986666555 587765321 12235789999999999999998 678899
Q ss_pred HHHHHHHHHhHccCCCEEEEEEEecCCCC
Q 019498 204 SAVHAAREMAIGEGRPILIEALTYRVGHH 232 (340)
Q Consensus 204 ~a~~~a~~~~r~~~~P~lIe~~t~R~~gH 232 (340)
++++++++ .++|+|||+.|+|..+.
T Consensus 527 ~al~~a~~----~~gp~liev~~~~~~~~ 551 (589)
T 2pgn_A 527 GALQRAID----SGKPALIEIPVSKTQGL 551 (589)
T ss_dssp HHHHHHHH----HCSCEEEEEECCSSSST
T ss_pred HHHHHHHh----CCCCEEEEEEecCCCCc
Confidence 99988875 47999999999886543
No 32
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=99.69 E-value=3.7e-17 Score=169.51 Aligned_cols=117 Identities=18% Similarity=0.218 Sum_probs=96.7
Q ss_pred CccccchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEE-EeCCcccccccc-----C--
Q 019498 102 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPIS-----D-- 173 (340)
Q Consensus 102 ~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv-~nN~~~~~~~~~-----~-- 173 (340)
.|+||+++|.|+|+++|. ++++|||++|||+|++ .+++|++|+++++|+++|| +||+|++....+ .
T Consensus 512 ~G~mG~~lpaAiGaalA~----p~~~Vv~i~GDGsf~~--~~~eL~ta~~~~l~v~ivV~NN~~~g~~~~~~~~~~~~~~ 585 (677)
T 1t9b_A 512 LGTMGYGLPAAIGAQVAK----PESLVIDIDGDASFNM--TLTELSSAVQAGTPVKILILNNEEQGMVTQWQSLFYEHRY 585 (677)
T ss_dssp SCCTTCHHHHHHHHHHHC----TTSEEEEEEEHHHHHH--HGGGHHHHHHHTCCCEEEEEECSSCHHHHHHHHHHSTTCC
T ss_pred cchhhchHHHHHHHHHhC----CCCeEEEEEeehHHhc--cHHHHHHHHHhCCCeEEEEEeCCCchhhhhhhhhhcCCCc
Confidence 479999999999999985 7899999999999985 4677999999999986555 555688754211 1
Q ss_pred ---ccCccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEecCC
Q 019498 174 ---QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 230 (340)
Q Consensus 174 ---~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~~ 230 (340)
.....|+.++|++||+++++|+ +++++.++++++++ .++|+|||+.|.|..
T Consensus 586 ~~~~~~~~d~~~la~a~G~~~~~v~--~~~el~~al~~a~~----~~gp~lIev~~~~~~ 639 (677)
T 1t9b_A 586 SHTHQLNPDFIKLAEAMGLKGLRVK--KQEELDAKLKEFVS----TKGPVLLEVEVDKKV 639 (677)
T ss_dssp CSCCCCCCCHHHHHHHTTCEEEEEC--SHHHHHHHHHHHHH----CSSCEEEEEEBCSSC
T ss_pred ccCcCCCCCHHHHHHHcCCeEEEEC--CHHHHHHHHHHHHH----CCCcEEEEEEecCCc
Confidence 1235689999999999999998 89999999988875 579999999999864
No 33
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=99.69 E-value=2.4e-17 Score=167.84 Aligned_cols=115 Identities=25% Similarity=0.331 Sum_probs=96.0
Q ss_pred CccccchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEE-EeCCccccccc---------
Q 019498 102 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPI--------- 171 (340)
Q Consensus 102 ~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv-~nN~~~~~~~~--------- 171 (340)
.|+||+++|.|+|+|+|. ++++|||++|||+|+++ +++|++|+++++|+++|| +||+|++....
T Consensus 435 ~g~mG~~l~~AiGaa~a~----~~~~vv~i~GDG~~~~~--~~~L~~a~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~~ 508 (573)
T 2iht_A 435 CSSFGYGIPAAIGAQMAR----PDQPTFLIAGDGGFHSN--SSDLETIARLNLPIVTVVVNNDTNGLIELYQNIGHHRSH 508 (573)
T ss_dssp SCCTTCHHHHHHHHHHHS----TTSCEEEEEEHHHHHHT--GGGHHHHHHHTCCCEEEEEECSBCHHHHHHHHHHHSSCC
T ss_pred CcccccHHHHHHHHHHhC----CCCcEEEEEccHHHHhH--HHHHHHHHHhCCCeEEEEEECCcchhhHHHHHHhcCCCc
Confidence 589999999999999986 57899999999999864 678999999999986665 55568876532
Q ss_pred c--CccCccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEec
Q 019498 172 S--DQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 228 (340)
Q Consensus 172 ~--~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R 228 (340)
. ......|+.+++++||+++++|+ +++++.+++++|++ .++|+|||+.|.|
T Consensus 509 ~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~----~~gp~liev~~~~ 561 (573)
T 2iht_A 509 DPAVKFGGVDFVALAEANGVDATRAT--NREELLAALRKGAE----LGRPFLIEVPVNY 561 (573)
T ss_dssp GGGTBCCCCCHHHHHHHTTCEEEECC--SHHHHHHHHHHHHT----SSSCEEEEEEBCC
T ss_pred CccccCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHh----CCCCEEEEEECCC
Confidence 1 22334689999999999999998 88999988888764 6899999999987
No 34
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=99.67 E-value=8.1e-17 Score=163.17 Aligned_cols=118 Identities=20% Similarity=0.268 Sum_probs=94.8
Q ss_pred cCccccchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEE-EeCCcccccccc-------
Q 019498 101 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPIS------- 172 (340)
Q Consensus 101 ~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv-~nN~~~~~~~~~------- 172 (340)
..|+||+++|.|+|++++. ++++|||++|||+|+++ +++|++|.++++|+++|| +||+|++.....
T Consensus 404 ~~g~mG~~l~~AiGaala~----~~~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~nN~~~g~~~~~~~~~~~~~ 477 (549)
T 3eya_A 404 NHGSMANAMPQALGAQATE----PERQVVAMCGDGGFSML--MGDFLSVVQMKLPVKIVVFNNSVLGFVAMEMKAGGYLT 477 (549)
T ss_dssp TTCCTTCHHHHHHHHHHHS----TTSCEEEEEEHHHHHHT--GGGHHHHHHTTCCCEEEEEECSBCCCC-----------
T ss_pred CCchhhhHHHHHHHHHHhC----CCCcEEEEEccchhhcc--HHHHHHHHHhCCCeEEEEEeCCccHHHHHHHHhcCCCC
Confidence 3589999999999999985 68899999999999754 678999999999976555 555677643211
Q ss_pred --CccCccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEecCC
Q 019498 173 --DQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 230 (340)
Q Consensus 173 --~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~~ 230 (340)
......|+.+++++||+++++|+ +++++.++++++++ .+||+|||+.|.+..
T Consensus 478 ~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~----~~gp~liev~~~~~~ 531 (549)
T 3eya_A 478 DGTELHDTNFARIAEACGITGIRVE--KASEVDEALQRAFS----IDGPVLVDVVVAKEE 531 (549)
T ss_dssp -CCBCCCCCHHHHHHHTTSEEEEEC--SGGGHHHHHHHHHH----SSSCEEEEEEBCCCC
T ss_pred cCCcCCCCCHHHHHHHcCCcEEEeC--CHHHHHHHHHHHHh----CCCCEEEEEEecccc
Confidence 11234689999999999999998 88899999988875 589999999997753
No 35
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=99.67 E-value=1.1e-16 Score=163.66 Aligned_cols=118 Identities=21% Similarity=0.243 Sum_probs=96.9
Q ss_pred CccccchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEE-EeCCcccccccc--------
Q 019498 102 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPIS-------- 172 (340)
Q Consensus 102 ~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv-~nN~~~~~~~~~-------- 172 (340)
+|++|+++|.|+|+++|. ++++|||++|||+|+++ +++|++|+++++|+++|| +||+|++....+
T Consensus 425 ~G~~G~~l~~AiGaala~----~~~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~~ 498 (590)
T 1ybh_A 425 LGAMGFGLPAAIGASVAN----PDAIVVDIDGDGSFIMN--VQELATIRVENLPVKVLLLNNQHLGMVMQWEDRFYKANR 498 (590)
T ss_dssp SCCTTCHHHHHHHHHHHC----TTSCEEEEEEHHHHHHT--TTHHHHHHHTTCCEEEEEEECSBCHHHHHHHHHHSTTCC
T ss_pred cccccchHHHHHHHHHhC----CCCcEEEEEccchhhcc--HHHHHHHHHhCCCcEEEEEECCcchHHHHHHHHhcCCcc
Confidence 589999999999999986 57899999999999864 678999999999976665 555787753211
Q ss_pred -Cc---c------CccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEecCCC
Q 019498 173 -DQ---F------RSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGH 231 (340)
Q Consensus 173 -~~---~------~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~~g 231 (340)
.. . ...|+.++|++||+++++|+ +++++.+++++|++ .++|+|||+.|.|...
T Consensus 499 ~~~~~~~p~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~gp~liev~~~~~~~ 561 (590)
T 1ybh_A 499 AHTFLGDPAQEDEIFPNMLLFAAACGIPAARVT--KKADLREAIQTMLD----TPGPYLLDVICPHQEH 561 (590)
T ss_dssp CSCBCSCGGGTTSCSSCHHHHHHHTTCCEEEEC--BHHHHHHHHHHHHH----SSSCEEEEEECCTTCC
T ss_pred ccccccccccccCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHh----CCCCEEEEEEecCCcc
Confidence 00 1 13589999999999999998 89999999988875 5799999999998653
No 36
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=99.67 E-value=6.6e-17 Score=164.34 Aligned_cols=115 Identities=23% Similarity=0.276 Sum_probs=96.1
Q ss_pred CccccchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEE-EeCCccccccccC----ccC
Q 019498 102 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPISD----QFR 176 (340)
Q Consensus 102 ~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv-~nN~~~~~~~~~~----~~~ 176 (340)
.|+||+++|.|+|+|+|. ++++|||++|||++++ .+++|++|+++++|+++|| +||+|++...... ...
T Consensus 408 ~g~mG~~l~~A~G~ala~----~~~~vv~~~GDG~~~~--~~~eL~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~ 481 (566)
T 2vbi_A 408 WGHIGWSVPSAFGNAMGS----QDRQHVVMVGDGSFQL--TAQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPYNYIK 481 (566)
T ss_dssp TCCTTTHHHHHHHHHHTC----TTSEEEEEEEHHHHHH--HGGGHHHHHHTTCCCEEEEEECSSCHHHHTTSCCGGGCCC
T ss_pred ccchhhHHHHHHHHHHhC----CCCcEEEEEcchHHHh--hHHHHHHHHHhCCCcEEEEEECCcceEEEeeccCCccCCC
Confidence 689999999999999985 6789999999999985 4677999999999975555 5667988754431 223
Q ss_pred ccchhhhhhhcCc-----eEEEEcCCCHHHHHHHHHHHHHHhHcc-CCCEEEEEEEec
Q 019498 177 SDGAVVKGRAYGV-----RSIRVDGNDALAIYSAVHAAREMAIGE-GRPILIEALTYR 228 (340)
Q Consensus 177 ~~~~~~~a~a~G~-----~~~~VdG~d~~~v~~a~~~a~~~~r~~-~~P~lIe~~t~R 228 (340)
..|+.++|++||+ ++++|+ +++++.++++++++ . ++|+|||+.|.|
T Consensus 482 ~~d~~~~a~a~G~~~~~~~~~~v~--~~~el~~al~~a~~----~~~gp~liev~~~~ 533 (566)
T 2vbi_A 482 NWDYAGLMEVFNAGEGHGLGLKAT--TPKELTEAIARAKA----NTRGPTLIECQIDR 533 (566)
T ss_dssp CCCTTTHHHHHHTTTCCCEEEEEC--SHHHHHHHHHHHHH----CCSSCEEEEEECCT
T ss_pred CCCHHHHHHHcCCCCCCccEEEeC--CHHHHHHHHHHHHh----cCCCcEEEEEEeCc
Confidence 4689999999999 999998 89999999998875 4 799999999975
No 37
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=99.67 E-value=8.6e-17 Score=163.64 Aligned_cols=117 Identities=20% Similarity=0.243 Sum_probs=94.9
Q ss_pred cCccccchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEE-EeCCcccccccc------C
Q 019498 101 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPIS------D 173 (340)
Q Consensus 101 ~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv-~nN~~~~~~~~~------~ 173 (340)
..|+||+++|.|+|+|+|. ++++|||++|||+|++ .+++|++|.++++|+++|| +||+|++..... .
T Consensus 423 ~~g~mG~~l~~A~Gaala~----~~~~vv~~~GDG~~~~--~~~eL~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~ 496 (570)
T 2vbf_A 423 LWGSIGYTFPAALGSQIAD----KESRHLLFIGDGSLQL--TVQELGLSIREKLNPICFIINNDGYTVEREIHGPTQSYN 496 (570)
T ss_dssp TTCCTTTHHHHHHHHHHHC----TTSEEEEEEEHHHHHH--HGGGHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGGG
T ss_pred cchhhhhhHHHHHHHHHhC----CCCcEEEEEcchhhhc--CHHHHHHHHHcCCCCEEEEEECCchHHHHHHhccCCCcc
Confidence 4689999999999999985 6789999999999985 4677999999999976555 555788764322 1
Q ss_pred ccCccchhhhhhhcCce-----EEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEec
Q 019498 174 QFRSDGAVVKGRAYGVR-----SIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 228 (340)
Q Consensus 174 ~~~~~~~~~~a~a~G~~-----~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R 228 (340)
.....|+.+++++||++ +++|+ +++++.++++++. ++.++|+|||+.|+|
T Consensus 497 ~~~~~d~~~~a~a~G~~~~~~~~~~v~--~~~el~~al~~a~---~~~~~p~liev~~~~ 551 (570)
T 2vbf_A 497 DIPMWNYSKLPETFGATEDRVVSKIVR--TENEFVSVMKEAQ---ADVNRMYWIELVLEK 551 (570)
T ss_dssp CCCCCCGGGHHHHTTCCTTTEEEEEEC--BHHHHHHHHHHHH---HCTTSEEEEEEECCT
T ss_pred CCCCCCHHHHHHHcCCCcCCcceEEec--CHHHHHHHHHHHH---hcCCCcEEEEEEcCc
Confidence 12346899999999998 89998 7899998888742 246799999999975
No 38
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=99.67 E-value=5.7e-17 Score=164.88 Aligned_cols=115 Identities=19% Similarity=0.198 Sum_probs=95.5
Q ss_pred CccccchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEE-EeCCcccccccc-----Ccc
Q 019498 102 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPIS-----DQF 175 (340)
Q Consensus 102 ~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv-~nN~~~~~~~~~-----~~~ 175 (340)
.|+||+++|.|+|+|+|. ++++|||++|||+|+ +.+++|++|.++++|+++|| +||+|++....+ ...
T Consensus 421 ~g~mG~~l~~A~G~ala~----~~~~vv~i~GDG~~~--~~~~~l~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~ 494 (565)
T 2nxw_A 421 YAGMGFGVPAGIGAQCVS----GGKRILTVVGDGAFQ--MTGWELGNCRRLGIDPIVILFNNASWEMLRTFQPESAFNDL 494 (565)
T ss_dssp TCCTTCHHHHHHHHHHHT----TTCCEEEEEEHHHHH--HHGGGGGGHHHHTCCCEEEEEECSBCHHHHHHCTTCGGGBC
T ss_pred cccccccchHHHHHHHhC----CCCcEEEEEechHHH--hhHHHHHHHHHhCCCCEEEEEECCCCcEEeeecccCCCCcC
Confidence 589999999999999996 578999999999998 67888999999999976665 555688753321 122
Q ss_pred CccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCE-EEEEEEec
Q 019498 176 RSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPI-LIEALTYR 228 (340)
Q Consensus 176 ~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~-lIe~~t~R 228 (340)
...|+.++|++||+++++|+ +++++.++++++++ .++|+ |||+.|+|
T Consensus 495 ~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~gp~~liev~~~~ 542 (565)
T 2nxw_A 495 DDWRFADMAAGMGGDGVRVR--TRAELKAALDKAFA----TRGRFQLIEAMIPR 542 (565)
T ss_dssp CCCCHHHHTGGGTSEEEEEC--BHHHHHHHHHHHHH----CCSSCEEEEEECCT
T ss_pred CCCCHHHHHHHcCCCEEEeC--CHHHHHHHHHHHHh----cCCCeEEEEEEccc
Confidence 35689999999999999999 88999999998875 46888 99999965
No 39
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=99.67 E-value=6.9e-17 Score=163.66 Aligned_cols=115 Identities=19% Similarity=0.197 Sum_probs=94.1
Q ss_pred CccccchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEe-CCcccccccc------Cc
Q 019498 102 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRN-NGWAISTPIS------DQ 174 (340)
Q Consensus 102 ~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~n-N~~~~~~~~~------~~ 174 (340)
.|+||+++|.|+|+++|. ++++|||++|||++++ .+++|.+|.++++|+++||.| |+|++..... ..
T Consensus 407 ~g~mG~~l~~A~G~a~a~----~~~~vv~~~GDG~~~~--~~~el~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~ 480 (552)
T 1ovm_A 407 WGSIGYTLAAAFGAQTAC----PNRRVIVLTGDGAAQL--TIQELGSMLRDKQHPIILVLNNEGYTVERAIHGAEQRYND 480 (552)
T ss_dssp TCCTTHHHHHHHHHHHHC----TTSCEEEEEEHHHHHH--HTTHHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGGGC
T ss_pred hHhhhhHHHHHHHHHHhC----CCCcEEEEECchHHHh--HHHHHHHHHHhCCCCEEEEEECCCCeEEEeeccCCCCccc
Confidence 689999999999999985 5789999999999984 578899999999997666654 5688763221 11
Q ss_pred cCccchhhhhhhcCc----eEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEec
Q 019498 175 FRSDGAVVKGRAYGV----RSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 228 (340)
Q Consensus 175 ~~~~~~~~~a~a~G~----~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R 228 (340)
....|+.+++++||+ ++++|+ +++++.+++++++ +.++|+|||+.|.+
T Consensus 481 ~~~~d~~~~a~a~G~~~~~~~~~v~--~~~~l~~al~~a~----~~~gp~liev~~~~ 532 (552)
T 1ovm_A 481 IALWNWTHIPQALSLDPQSECWRVS--EAEQLADVLEKVA----HHERLSLIEVMLPK 532 (552)
T ss_dssp CCCCCGGGSTTTSCSSCCEEEEEEC--BHHHHHHHHHHHT----TCSSEEEEEEECCT
T ss_pred CCCCCHHHHHHHhCCCcCCCEEEeC--CHHHHHHHHHHHH----hCCCCEEEEEEcCc
Confidence 234689999999999 999999 7889988888765 36899999999965
No 40
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=99.66 E-value=1.2e-16 Score=162.39 Aligned_cols=153 Identities=17% Similarity=0.124 Sum_probs=111.5
Q ss_pred CCHHHHHHHhhcCCCCC---CCCCc----cccccCCC-CCCccc--cCccccchhhHHHHHHHHhhhcCCCCeEEEEECC
Q 019498 65 FSMQEFANQCFGNKADY---GKGRQ----MPIHYGSN-KHNYFT--VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGD 134 (340)
Q Consensus 65 ~~~~~~~~~~~~~~~~~---~~G~~----~~~h~~~~-~~~~~~--~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GD 134 (340)
+++..++..+....+.. ..+.+ ...|+..+ ...++. ..|+||+++|.|+|+|+|. ++++|||++||
T Consensus 365 ~~~~~~~~~l~~~l~~~~iv~~d~G~~~~~~~~~~~~~~~~~~~~~~~g~~G~~l~~A~G~ala~----~~~~vv~i~GD 440 (568)
T 2wvg_A 365 LVNAEIARQVEALLTPNTTVIAETGDSWFNAQRMKLPNGARVEYEMQWGHIGWSVPAAFGYAVGA----PERRNILMVGD 440 (568)
T ss_dssp CCHHHHHHHHHTTCCTTEEEEECSSHHHHHHHTCCCCTTCEEECCTTTCCTTTHHHHHHHHHHHC----TTSEEEEEEEH
T ss_pred cCHHHHHHHHHHhCCCCCEEEEcCcHHHHHHhhcccCCCCeEEeCCCcchhhhHHHHHHHHHHhC----CCCcEEEEEcC
Confidence 45666777766554431 11111 12233322 223443 3689999999999999985 68899999999
Q ss_pred cccCcchHHHHHHHHHhCCCCEEEEE-EeCCccccccccC----ccCccchhhhhhhcCc---------eEEEEcCCCHH
Q 019498 135 GGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPISD----QFRSDGAVVKGRAYGV---------RSIRVDGNDAL 200 (340)
Q Consensus 135 G~~~~G~~~Eal~~A~~~~Lpvi~vv-~nN~~~~~~~~~~----~~~~~~~~~~a~a~G~---------~~~~VdG~d~~ 200 (340)
|+|++ .+++|++|.++++|+++|| +||+|++...... .....|+.+++++||+ ++++|+ +.+
T Consensus 441 Gs~~~--~~~el~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~~~~~~~~~~v~--~~~ 516 (568)
T 2wvg_A 441 GSFQL--TAQEVAQMVRLKLPVIIFLINNYGYTIEVMIHDGPYNNIKNWDYAGLMEVFNGNGGYDSGAGKGLKAK--TGG 516 (568)
T ss_dssp HHHHH--HGGGHHHHHHTTCCCEEEEEECSSCHHHHTTSCCGGGCCCCCCHHHHHHHHHCTTSSSCCCCEEEEES--BHH
T ss_pred hhHhc--cHHHHHHHHHcCCCcEEEEEECCcceEeeeeccCCCcCCCCCCHHHHHHHhCCCcccccCCcceEEeC--CHH
Confidence 99985 4677999999999975554 6667988754432 2234689999999999 999998 889
Q ss_pred HHHHHHHHHHHHhHccCCCEEEEEEEec
Q 019498 201 AIYSAVHAAREMAIGEGRPILIEALTYR 228 (340)
Q Consensus 201 ~v~~a~~~a~~~~r~~~~P~lIe~~t~R 228 (340)
++.++++++++. .++|+|||+.|+|
T Consensus 517 el~~al~~a~~~---~~gp~liev~~~~ 541 (568)
T 2wvg_A 517 ELAEAIKVALAN---TDGPTLIECFIGR 541 (568)
T ss_dssp HHHHHHHHHHHC---CSSCEEEEEECCT
T ss_pred HHHHHHHHHHhc---CCCcEEEEEEcCc
Confidence 999999988752 2799999999975
No 41
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=99.66 E-value=1.8e-16 Score=161.17 Aligned_cols=116 Identities=18% Similarity=0.153 Sum_probs=95.5
Q ss_pred cCccccchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCC-c-cccccc--cC---
Q 019498 101 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNG-W-AISTPI--SD--- 173 (340)
Q Consensus 101 ~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~-~-~~~~~~--~~--- 173 (340)
..|+||+++|.|+|++++ ++++|||++|||+|++ .+++|++|+++++|+++||.||+ | ++.... ..
T Consensus 424 ~~g~~G~~l~~AiGaala-----~~~~vv~i~GDGsf~~--~~~el~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~ 496 (568)
T 2c31_A 424 TWGVMGIGMGYCVAAAAV-----TGKPVIAVEGDSAFGF--SGMELETICRYNLPVTVIIMNNGGIYKGNEADPQPGVIS 496 (568)
T ss_dssp TTTCSSCHHHHHHHHHHH-----HCSCEEEEEEHHHHHT--TGGGHHHHHHTTCCEEEEEEESSBSSCSCCCCSBTTBCC
T ss_pred CCccccccHHHHHHHHhC-----CCCcEEEEEcchHhhc--cHHHHHHHHHhCCCeEEEEEeCchhHHHHHHHhhcCCcc
Confidence 358999999999999997 5789999999999975 46789999999999988887776 3 443211 00
Q ss_pred --ccCccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEecC
Q 019498 174 --QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRV 229 (340)
Q Consensus 174 --~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~ 229 (340)
.....|+.++|++||+++++|+ +++++.++++++++ .++|+|||+.|.|.
T Consensus 497 ~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~~p~liev~~~~~ 548 (568)
T 2c31_A 497 CTRLTRGRYDMMMEAFGGKGYVAN--TPAELKAALEEAVA----SGKPCLINAMIDPD 548 (568)
T ss_dssp TTBCCCCCHHHHHHTTTCEEEEES--SHHHHHHHHHHHHH----HTSCEEEEEEBCTT
T ss_pred cCcCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHh----CCCCEEEEEEeccc
Confidence 0335689999999999999998 89999999998875 57999999999864
No 42
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=99.65 E-value=2.4e-16 Score=160.12 Aligned_cols=117 Identities=15% Similarity=0.084 Sum_probs=95.2
Q ss_pred cCccccchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCC-c-cccccc-------
Q 019498 101 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNG-W-AISTPI------- 171 (340)
Q Consensus 101 ~~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~-~-~~~~~~------- 171 (340)
..|+||+++|.|+|++++ ++++|||++|||+|++ .+++|.+|+++++|+++||.||+ | ++....
T Consensus 419 ~~g~~G~~l~~AiGaa~a-----~~~~vv~i~GDGsf~~--~~~el~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~ 491 (564)
T 2q28_A 419 TWGVMGIGMGYAIGASVT-----SGSPVVAIEGDSAFGF--SGMEIETICRYNLPVTIVIFNNGGIYRGDGVDLSGAGAP 491 (564)
T ss_dssp TTTCTTCHHHHHHHHHHH-----HCSCEEEEEEHHHHHT--TGGGHHHHHHTTCCEEEEEEECSBSSCSCCCCTTSSCCC
T ss_pred CCCcccchHHHHHHHhhc-----CCCcEEEEEcchHhhc--cHHHHHHHHHhCCCeEEEEEeCchhHHHHHHHHhccCCc
Confidence 468999999999999997 5789999999999975 35779999999999988877776 3 443211
Q ss_pred cC--ccCccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEecCC
Q 019498 172 SD--QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 230 (340)
Q Consensus 172 ~~--~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~~ 230 (340)
.. .....|+.++|++||+++++|+ +++++.++++++++ .++|+|||+.|.|..
T Consensus 492 ~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~~p~liev~~~~~~ 546 (564)
T 2q28_A 492 SPTDLLHHARYDKLMDAFRGVGYNVT--TTDELRHALTTGIQ----SRKPTIINVVIDPAA 546 (564)
T ss_dssp CTTBCCTTCCGGGGGGGGTCEEEEEC--SHHHHHHHHHHHHH----HTSCEEEEEEBCTTS
T ss_pred cccccCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHh----CCCCEEEEEEecccc
Confidence 00 1124689999999999999998 89999999998875 478999999998753
No 43
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=99.59 E-value=9.8e-16 Score=155.45 Aligned_cols=150 Identities=15% Similarity=0.106 Sum_probs=102.2
Q ss_pred CCHHHHHHHhhcCCCCC---CCCCcccc-c---cC--CCCCCcccc---CccccchhhHHHHHHHHhhhcCCCCeEEEEE
Q 019498 65 FSMQEFANQCFGNKADY---GKGRQMPI-H---YG--SNKHNYFTV---SSTIATQLPHAVGAAYALKMDRKDACAVTYF 132 (340)
Q Consensus 65 ~~~~~~~~~~~~~~~~~---~~G~~~~~-h---~~--~~~~~~~~~---~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~ 132 (340)
+++..++.++....++. +.|.+... + +. .....++.+ .|++|. +|.|+|+++| ++++|||++
T Consensus 367 ~~~~~~~~~l~~~l~~~~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~G~-l~~A~Gaa~a-----~~~~vv~i~ 440 (556)
T 3hww_A 367 FGEAQLAHRICDYLPEQGQLFVGNSLVVRLIDALSQLPAGYPVYSNRGASGIDGL-LSTAAGVQRA-----SGKPTLAIV 440 (556)
T ss_dssp SSHHHHHHTGGGTCCTTCEEEECSSHHHHHHHHHCCCCTTCCEEECCSSCCSSSH-HHHHHHHHHH-----HCCCEEEEE
T ss_pred cCHHHHHHHHHHhCCCCCeEEEeCCcHHHHHHHhccCCCCceEEecCcccccccH-HHHHHHHHhc-----CCCcEEEEE
Confidence 66777777776655432 12322211 0 01 112234433 456666 9999999998 378899999
Q ss_pred CCcccCcchHHHHHHHHHhCCCCEEEEEEeCC-ccccccc-------c---CccCccchhhhhhhcCceEEEEcCCCHHH
Q 019498 133 GDGGTSEGDFHAALNFSAVTEAPVIFICRNNG-WAISTPI-------S---DQFRSDGAVVKGRAYGVRSIRVDGNDALA 201 (340)
Q Consensus 133 GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~-~~~~~~~-------~---~~~~~~~~~~~a~a~G~~~~~VdG~d~~~ 201 (340)
|||+|++ ..++|++|.++++|+++||.||+ |++.... . ......||.++|++||+++++|+ ++++
T Consensus 441 GDGsf~~--~~~eL~ta~~~~lpv~ivv~NN~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~ 516 (556)
T 3hww_A 441 GDLSALY--DLNALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFELKYHRPQ--NWQE 516 (556)
T ss_dssp EHHHHHH--TGGGHHHHTTCSSCEEEEEEESCC-----------------CCCCCCCCSHHHHHHTTCEEECCS--SHHH
T ss_pred ccHHhhh--cchhhHhhcccCCCcEEEEEECCCCCcccCCCCcchhHHHhccCCCCCCHHHHHHHcCCcEEecC--CHHH
Confidence 9999974 35669999999999988887776 5554321 1 11235789999999999999998 8888
Q ss_pred HHHHHHHHHHHhHccCCCEEEEEEEec
Q 019498 202 IYSAVHAAREMAIGEGRPILIEALTYR 228 (340)
Q Consensus 202 v~~a~~~a~~~~r~~~~P~lIe~~t~R 228 (340)
+.++++++++ .++|+|||+.|.|
T Consensus 517 l~~al~~a~~----~~gp~liev~~~~ 539 (556)
T 3hww_A 517 LETAFADAWR----TPTTTVIEMVVND 539 (556)
T ss_dssp HHHHHHHHTT----SSSEEEEEEECCS
T ss_pred HHHHHHHHHh----CCCCEEEEEECCc
Confidence 8888877654 6899999999853
No 44
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=99.58 E-value=4.7e-16 Score=159.30 Aligned_cols=119 Identities=17% Similarity=0.074 Sum_probs=93.7
Q ss_pred Ccccc--CccccchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEE-EeCCccccccccC
Q 019498 97 NYFTV--SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPISD 173 (340)
Q Consensus 97 ~~~~~--~g~lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv-~nN~~~~~~~~~~ 173 (340)
.++.+ .+.+|+++|.|+|+|+|. +++|||++|||+|+++ +++|++|+++++|+++|| +||+|++......
T Consensus 447 ~~~~~~G~~~ig~~l~~AiGaala~-----~~~vv~i~GDGsf~~~--~~eL~ta~~~~lp~~ivv~NN~~~~i~~~~~~ 519 (604)
T 2x7j_A 447 RIYSNRGANGIDGVVSSAMGVCEGT-----KAPVTLVIGDLSFYHD--LNGLLAAKKLGIPLTVILVNNDGGGIFSFLPQ 519 (604)
T ss_dssp EEECCTTTCCSSSHHHHHHHHHHHH-----TSCEEEEEEHHHHHHT--GGGGHHHHHHCCCEEEEEEECSSCGGGGGSGG
T ss_pred eEEeCCCcCCcCcHHHHHHHHHhcC-----CCcEEEEEccHHHHhH--HHHHHHhhhcCCCeEEEEEeCCCCcccccCCC
Confidence 34443 368999999999999983 6789999999999864 467999999999986665 5557887432210
Q ss_pred ------------ccCccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEec
Q 019498 174 ------------QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 228 (340)
Q Consensus 174 ------------~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R 228 (340)
.....|+.++|++||+++++|+ +++++.++++++++ .++|+|||+.|.|
T Consensus 520 ~q~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~gp~liev~~~~ 580 (604)
T 2x7j_A 520 ASEKTHFEDLFGTPTGLDFKHAAALYGGTYSCPA--SWDEFKTAYAPQAD----KPGLHLIEIKTDR 580 (604)
T ss_dssp GSCHHHHHHHTTCCCCCCTHHHHHHTTCEEECCS--SHHHHHHHCCCCCS----SCCEEEEEEECCH
T ss_pred CccchhhHhhccCCCCCCHHHHHHHcCCeEEecC--CHHHHHHHHHHHHh----CCCCEEEEEECCc
Confidence 1124689999999999999998 78898888877653 6899999999854
No 45
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=99.55 E-value=2.1e-15 Score=153.66 Aligned_cols=118 Identities=14% Similarity=0.032 Sum_probs=83.1
Q ss_pred ccccCccc--cchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeC-Cccccccc---
Q 019498 98 YFTVSSTI--ATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNN-GWAISTPI--- 171 (340)
Q Consensus 98 ~~~~~g~l--G~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN-~~~~~~~~--- 171 (340)
++.+.|.+ |+++|.|+|+|+ ++++|||++|||+|++ ..++|++|+++++|+++||.|| +|++....
T Consensus 429 ~~~~~G~~G~~g~l~~AiGaa~------~~~~vv~i~GDGsf~~--~~~eL~ta~~~~l~~~ivv~NN~~~g~~~~~~~~ 500 (578)
T 3lq1_A 429 MLANRGANGIDGVVSSALGASV------VFQPMFLLIGDLSFYH--DMNGLLMAKKYKMNLTIVIVNNDGGGIFSFLPQA 500 (578)
T ss_dssp EECCCSSCCSSSHHHHHHHHTT------TSSSEEEEEEHHHHHH--TGGGGHHHHHTTCCEEEEEECCC-----------
T ss_pred EEeCCCccccccHHHHHHHHhc------CCCCEEEEEchHHHHh--hHHHHHhhccCCCCeEEEEEECCcCccccccccc
Confidence 44444433 346999999863 4789999999999974 4677999999999997777666 57765421
Q ss_pred c------C---ccCccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEecC
Q 019498 172 S------D---QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRV 229 (340)
Q Consensus 172 ~------~---~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~ 229 (340)
. . .....||.++|++||+++++|+ +++++.++++++++ .++|+|||+.|.|.
T Consensus 501 ~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~gp~liev~~~~~ 561 (578)
T 3lq1_A 501 NEPKYFESLFGTSTELDFRFAAAFYDADYHEAK--SVDELEEAIDKASY----HKGLDIIEVKTNRH 561 (578)
T ss_dssp --------------CCCTHHHHHHTTCEEEECC--SHHHHHHHHHHHTT----SSSEEEEEEC----
T ss_pred cccchhhhhccCCCCCCHHHHHHHcCCceEecC--CHHHHHHHHHHHHh----CCCCEEEEEECCcc
Confidence 0 0 0124689999999999999998 88999888887764 68999999998653
No 46
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=99.06 E-value=5.1e-10 Score=122.35 Aligned_cols=99 Identities=14% Similarity=0.114 Sum_probs=76.7
Q ss_pred CCeEEEEECCc-ccCcchHHHHHHHHHhCCCCEEEEEEeCC-ccccccccC-------c---------cCccchhhhhhh
Q 019498 125 DACAVTYFGDG-GTSEGDFHAALNFSAVTEAPVIFICRNNG-WAISTPISD-------Q---------FRSDGAVVKGRA 186 (340)
Q Consensus 125 ~~~vv~~~GDG-~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~-~~~~~~~~~-------~---------~~~~~~~~~a~a 186 (340)
++.||++.||| ++++| ..+|.+|.++++||++||.||+ |++...+.. . ...+||.++|++
T Consensus 953 ~~~Vv~i~GDG~~~~mg--~~eL~ta~~~~~~v~iiVlnN~~yg~tg~Q~s~~t~~~~~t~~~~~g~~~~~~D~~~iA~a 1030 (1231)
T 2c42_A 953 KKSVWIFGGDGWAYDIG--YGGLDHVLASGEDVNVFVMDTEVYSNTGGQSSKATPTGAVAKFAAAGKRTGKKDLARMVMT 1030 (1231)
T ss_dssp CCEEEEEEEHHHHHTTT--HHHHHHHHHTTCSCEEEEEECSSBTTTTCBCCTTSCTTCCBBTBTTCCSSCCCCHHHHHHT
T ss_pred CCcEEEEeCcHHHHHcc--hHHHHHHHHhCCCeEEEEEECHHHHhHHhhhccCCCCCceeeecccCCCCCchhHHHHHHH
Confidence 47899999999 88876 4569999999999977776665 555431111 0 113589999999
Q ss_pred cCceEEE-EcC-CCHHHHHHHHHHHHHHhHccCCCEEEEEEEecC
Q 019498 187 YGVRSIR-VDG-NDALAIYSAVHAAREMAIGEGRPILIEALTYRV 229 (340)
Q Consensus 187 ~G~~~~~-VdG-~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~ 229 (340)
||++++. +.- .++.++.+++++|++ .+||+||++.+...
T Consensus 1031 ~G~~~va~~~v~~~~~~l~~al~eAl~----~~GP~lI~v~~~c~ 1071 (1231)
T 2c42_A 1031 YGYVYVATVSMGYSKQQFLKVLKEAES----FPGPSLVIAYATCI 1071 (1231)
T ss_dssp TSSSEEEEECTTTCHHHHHHHHHHHHH----SSSCEEEEEECCCG
T ss_pred CCCCEEEEEeccCCHHHHHHHHHHHHh----cCCCEEEEEeecCc
Confidence 9999986 433 499999999999986 58999999998655
No 47
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=94.84 E-value=0.19 Score=50.68 Aligned_cols=107 Identities=18% Similarity=0.133 Sum_probs=75.8
Q ss_pred hhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccccc-cCccCccchhhhhhhc
Q 019498 109 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPI-SDQFRSDGAVVKGRAY 187 (340)
Q Consensus 109 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~-~~~~~~~~~~~~a~a~ 187 (340)
.-+|.|.|.+. +...+++|..|=|.++ ..-++..|..-++|+|+|.-+-........ ..+ ..|... ++.+
T Consensus 56 a~~A~GyAr~t---g~p~v~~~TsGpG~~N---~~~gv~~A~~~~vPll~itg~~~~~~~~~~~~~Q--~~d~~~-~~~~ 126 (589)
T 2pgn_A 56 AWMVNGYNYVK---DRSAAVGAWHCVGNLL---LHAAMQEARTGRIPAVHIGLNSDGRLAGRSEAAQ--QVPWQS-FTPI 126 (589)
T ss_dssp HHHHHHHHHHH---TSCCEEEEEEGGGGGG---CHHHHHHHHHTTCCEEEEEEESCGGGTTCTTCSS--CCCGGG-GTTT
T ss_pred HHHHHHHHHHH---CCCEEEEEecCchHHH---HHHHHHHHHhcCCCEEEEecCCcccccCCCCccc--ccChhh-cccc
Confidence 34677776553 4556888889999887 456788899999999999866544332111 111 225556 6667
Q ss_pred CceEEEEcCCCHHHHHHHHHHHHHHhHccC-CCEEEEEEE
Q 019498 188 GVRSIRVDGNDALAIYSAVHAAREMAIGEG-RPILIEALT 226 (340)
Q Consensus 188 G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~-~P~lIe~~t 226 (340)
--...++. +++++...+.+|+..+..++ ||+.|++-.
T Consensus 127 tk~~~~v~--~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~ 164 (589)
T 2pgn_A 127 ARSTQRVE--RLDKVGEAIHEAFRVAEGHPAGPAYVDIPF 164 (589)
T ss_dssp SSEEEECC--SGGGHHHHHHHHHHHHTSSSCCEEEEEEET
T ss_pred EEEEeecC--CHHHHHHHHHHHHHHHhcCCCccEEEEeCH
Confidence 66677777 88888999999998887766 999998754
No 48
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=94.78 E-value=0.1 Score=52.67 Aligned_cols=108 Identities=19% Similarity=0.162 Sum_probs=76.4
Q ss_pred hhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccccccCccCccchhhhhhhcC
Q 019498 109 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 188 (340)
Q Consensus 109 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G 188 (340)
.-+|.|.|.+. +...+++|..|=|+++ ..-++..|...++|+|+|.-+-........ .....|....++.+-
T Consensus 63 a~~A~Gyar~t---g~p~v~~~TsGpG~~N---~~~gv~~A~~~~vPll~itg~~~~~~~g~~--~~Q~~d~~~~~~~~~ 134 (590)
T 1ybh_A 63 VFAAEGYARSS---GKPGICIATSGPGATN---LVSGLADALLDSVPLVAITGQVPRRMIGTD--AFQETPIVEVTRSIT 134 (590)
T ss_dssp HHHHHHHHHHH---SSCEEEEECTTHHHHT---THHHHHHHHHHTCCEEEEEEECCGGGTTTT--CTTCCCHHHHHGGGS
T ss_pred HHHHHHHHHHH---CCCEEEEeccCchHHH---HHHHHHHHHhhCCCEEEEeCcCCccccCCC--cccccCHHHHHHHHh
Confidence 45677777653 3445666777777776 456788889999999999866543322111 111236777888887
Q ss_pred ceEEEEcCCCHHHHHHHHHHHHHHhHccC-CCEEEEEEE
Q 019498 189 VRSIRVDGNDALAIYSAVHAAREMAIGEG-RPILIEALT 226 (340)
Q Consensus 189 ~~~~~VdG~d~~~v~~a~~~a~~~~r~~~-~P~lIe~~t 226 (340)
-...++. +++++..++.+|+..++.++ ||+.|++-.
T Consensus 135 k~~~~v~--~~~~i~~~l~~A~~~a~~~~~GPV~l~iP~ 171 (590)
T 1ybh_A 135 KHNYLVM--DVEDIPRIIEEAFFLATSGRPGPVLVDVPK 171 (590)
T ss_dssp SEEEECC--CGGGHHHHHHHHHHHHHSSSCCEEEEEEEH
T ss_pred CeEEecC--CHHHHHHHHHHHHHHHhhCCCceEEEEeCc
Confidence 7778887 88899999999998887764 899998754
No 49
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=94.77 E-value=0.11 Score=52.30 Aligned_cols=109 Identities=17% Similarity=0.125 Sum_probs=76.2
Q ss_pred hhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccccccCccCccchhhhhhhcC
Q 019498 109 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 188 (340)
Q Consensus 109 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G 188 (340)
.-+|.|.|.+. +...+++|..|=|.++ ..-++..|..-++|+|+|.-+-........ ......|....++.+-
T Consensus 61 a~~A~Gyar~t---g~p~v~~~TsGpG~~N---~~~~v~~A~~~~~Pll~itg~~~~~~~~~~-~~~Q~~d~~~~~~~~~ 133 (573)
T 2iht_A 61 GVAADVLARIT---GRPQACWATLGPGMTN---LSTGIATSVLDRSPVIALAAQSESHDIFPN-DTHQCLDSVAIVAPMS 133 (573)
T ss_dssp HHHHHHHHHHH---CSCEEEEECTTHHHHH---HHHHHHHHHHHTCCEEEEEEESCGGGCCTT-TSTTCCCHHHHHGGGS
T ss_pred HHHHHHHHHHH---CCCEEEEEccCchHHH---HHHHHHHHHhhCCCEEEEcccCcccccCCc-CccccCCHHHHHHhHh
Confidence 44666776553 3344556666777664 566788888999999999876554332220 1111236778888887
Q ss_pred ceEEEEcCCCHHHHHHHHHHHHHHhHccC-CCEEEEEEE
Q 019498 189 VRSIRVDGNDALAIYSAVHAAREMAIGEG-RPILIEALT 226 (340)
Q Consensus 189 ~~~~~VdG~d~~~v~~a~~~a~~~~r~~~-~P~lIe~~t 226 (340)
-....+. +++++...+.+|+..+..++ ||+.|++-.
T Consensus 134 k~~~~v~--~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~ 170 (573)
T 2iht_A 134 KYAVELQ--RPHEITDLVDSAVNAAMTEPVGPSFISLPV 170 (573)
T ss_dssp SEEEECC--SGGGHHHHHHHHHHHHTBSSCCCEEEEEEH
T ss_pred hEEEEcC--CHHHHHHHHHHHHHHHhcCCCceEEEEecc
Confidence 7788887 88889999999998888775 999998865
No 50
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=94.69 E-value=0.13 Score=51.55 Aligned_cols=109 Identities=19% Similarity=0.110 Sum_probs=76.0
Q ss_pred hhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccccccCccCc-cchhhhhhhc
Q 019498 109 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRS-DGAVVKGRAY 187 (340)
Q Consensus 109 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~-~~~~~~a~a~ 187 (340)
.-+|.|.|.+. +...+++|..|=|.++ ..-++..|...++|+|+|+-+-......... ... .|....++.+
T Consensus 54 a~~A~Gyar~t---g~p~v~~~TsGpG~~N---~~~~l~~A~~~~~Pll~itg~~~~~~~~~~~--~Q~~~d~~~~~~~~ 125 (563)
T 2uz1_A 54 GHAAEGYARAG---AKLGVALVTAGGGFTN---AVTPIANAWLDRTPVLFLTGSGALRDDETNT--LQAGIDQVAMAAPI 125 (563)
T ss_dssp HHHHHHHHHHH---TSCEEEEECTTHHHHT---THHHHHHHHHHTCCEEEEEEECCGGGTTSCC--TTCCCCHHHHHGGG
T ss_pred HHHHHHHHHHh---CCCEEEEEccCccHHH---HHHHHHHHHhcCCCEEEEeCCCCcccCCchh--hhhhccHHHHhhhh
Confidence 44677776653 3444556666777776 4556778888999999998765443321111 112 4677888888
Q ss_pred CceEEEEcCCCHHHHHHHHHHHHHHhHccC-CCEEEEEEEe
Q 019498 188 GVRSIRVDGNDALAIYSAVHAAREMAIGEG-RPILIEALTY 227 (340)
Q Consensus 188 G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~-~P~lIe~~t~ 227 (340)
--...++. +++++...+.+|+..+..++ ||+.|++-..
T Consensus 126 tk~~~~v~--~~~~~~~~l~~A~~~a~~~~~GPV~l~iP~d 164 (563)
T 2uz1_A 126 TKWAHRVM--ATEHIPRLVMQAIRAALSAPRGPVLLDLPWD 164 (563)
T ss_dssp CSEEEECC--CGGGHHHHHHHHHHHHHSSSCCCEEEEEEHH
T ss_pred hceEEEcC--CHHHHHHHHHHHHHHhcCCCCceEEEEeCHH
Confidence 77788887 88889999999988888765 9999987553
No 51
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=94.51 E-value=0.11 Score=52.04 Aligned_cols=108 Identities=15% Similarity=0.034 Sum_probs=74.4
Q ss_pred hhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccccccCccCccchhhhhhhcC
Q 019498 109 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 188 (340)
Q Consensus 109 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G 188 (340)
.-+|.|.|.+. +...++++..|=|.++ ..-++..|..-++|+|+|.-+-......... ....|....++.+-
T Consensus 61 a~~A~Gyar~t---g~p~v~~~TsGpG~~N---~~~~l~~A~~~~vPll~itg~~~~~~~~~~~--~Q~~d~~~~~~~~t 132 (566)
T 1ozh_A 61 AFMAAAVGRIT---GKAGVALVTSGPGCSN---LITGMATANSEGDPVVALGGAVKRADKAKQV--HQSMDTVAMFSPVT 132 (566)
T ss_dssp HHHHHHHHHHH---SSCEEEEECSTHHHHT---THHHHHHHHHHTCCEEEEEEECCTTTC--------CCCHHHHHGGGC
T ss_pred HHHHHHHHHHH---CCCEEEEEccChHHHH---HHHHHHHHHhcCCCEEEEeCCCccccCCCCc--ccccCHHHHHHHHh
Confidence 44677776553 3444566666888876 4566888888899999998665433221111 11246778888887
Q ss_pred ceEEEEcCCCHHHHHHHHHHHHHHhHccC-CCEEEEEEE
Q 019498 189 VRSIRVDGNDALAIYSAVHAAREMAIGEG-RPILIEALT 226 (340)
Q Consensus 189 ~~~~~VdG~d~~~v~~a~~~a~~~~r~~~-~P~lIe~~t 226 (340)
-....+. +++++...+.+|+..+..++ ||+.|++-.
T Consensus 133 k~~~~v~--~~~~~~~~i~~A~~~A~~~r~GPV~l~iP~ 169 (566)
T 1ozh_A 133 KYAIEVT--APDALAEVVSNAFRAAEQGRPGSAFVSLPQ 169 (566)
T ss_dssp SEEEECC--SGGGHHHHHHHHHHHHHSSSCCEEEEEEEH
T ss_pred heEEEcC--CHHHHHHHHHHHHHHHhcCCCCeEEEEeCh
Confidence 7788887 88889899999988877764 999998755
No 52
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=94.23 E-value=0.16 Score=50.79 Aligned_cols=108 Identities=14% Similarity=-0.039 Sum_probs=74.3
Q ss_pred hhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccccccCccCccchhhhhhhcC
Q 019498 109 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 188 (340)
Q Consensus 109 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G 188 (340)
.-+|.|.|.+. +...+++|..|=|+++ ..-++..|..-++|+|+|.-+-....... ......|....++.+-
T Consensus 54 a~~A~GyAr~t---g~~~v~~~TsGpG~~N---~~~gi~~A~~~~vPvl~itg~~~~~~~~~--~~~Q~~d~~~~~~~~t 125 (549)
T 3eya_A 54 AFAAGAEAQLS---GELAVCAGSCGPGNLH---LINGLFDCHRNHVPVLAIAAHIPSSEIGS--GYFQETHPQELFRECS 125 (549)
T ss_dssp HHHHHHHHHHH---SSCEEEEECTTHHHHT---THHHHHHHHHTTCCEEEEEEESCGGGTTS--CCTTCCCHHHHTSTTC
T ss_pred HHHHHHHHHHh---CCCEEEEeCCCCcHhh---hHHHHHHHHhhCCCEEEEeCCCchhhcCC--CCCCccCHHHHHhhhh
Confidence 34667776553 4445666677888886 45678889999999999986543222111 1111236677777777
Q ss_pred ceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEE
Q 019498 189 VRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 226 (340)
Q Consensus 189 ~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t 226 (340)
-....+. +++++...+.+|+..+...+||+.|++-.
T Consensus 126 k~~~~v~--~~~~~~~~i~~A~~~A~~~~GPV~l~iP~ 161 (549)
T 3eya_A 126 HYCELVS--SPEQIPQVLAIAMRKAVLNRGVSVVVLPG 161 (549)
T ss_dssp SEEEECC--SGGGHHHHHHHHHHHHHHTTSEEEEEEEH
T ss_pred heEEEeC--CHHHHHHHHHHHHHHHhhCCCCEEEEeCh
Confidence 7777777 78888888888888777788999998743
No 53
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=94.20 E-value=0.17 Score=50.62 Aligned_cols=110 Identities=19% Similarity=0.106 Sum_probs=71.7
Q ss_pred hhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccccc---cCcc---Cccchh
Q 019498 108 QLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPI---SDQF---RSDGAV 181 (340)
Q Consensus 108 ~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~---~~~~---~~~~~~ 181 (340)
..-+|.|.|.+. + ..++++..|=|.++ ..-++..|...++|+|+|+-+-........ .... ...|..
T Consensus 53 Aa~~A~Gyar~t---g-~~v~~~TsGpG~~N---~~~gia~A~~~~vPll~itg~~~~~~~~~~~~~~~~~g~~~~~d~~ 125 (566)
T 2vbi_A 53 CGFSAEGYARSN---G-AAAAVVTFSVGAIS---AMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSYQL 125 (566)
T ss_dssp HHHHHHHHHHHH---S-CEEEEECTTTTHHH---HHHHHHHHHHTTCCEEEEEEECCGGGTTTTCBCTTSCSSSCCTHHH
T ss_pred HHHHHHHHHhhc---C-CeEEEEeCCCCHHH---HHHHHHHHHhhCCCEEEEECCCChHHhccCceeeeeccCcchHHHH
Confidence 345677776553 4 44455555777765 566788888999999999866543221110 0000 112567
Q ss_pred hhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEE
Q 019498 182 VKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 226 (340)
Q Consensus 182 ~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t 226 (340)
..++.+--....+. +++++...+.+|+..+..++||+.|++-.
T Consensus 126 ~~~~~~tk~~~~v~--~~~~~~~~l~~A~~~a~~~~GPV~l~iP~ 168 (566)
T 2vbi_A 126 EMARQVTCAAESIT--DAHSAPAKIDHVIRTALRERKPAYLDIAC 168 (566)
T ss_dssp HHHHTTCSEEEEEC--SSSSHHHHHHHHHHHHHHHTCCEEEEEET
T ss_pred HHHhhhEeEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEEech
Confidence 78888877778887 66667777777777776778999999864
No 54
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=94.18 E-value=0.21 Score=50.06 Aligned_cols=109 Identities=17% Similarity=0.081 Sum_probs=73.8
Q ss_pred hhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccccc---cCc---cCccchhh
Q 019498 109 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPI---SDQ---FRSDGAVV 182 (340)
Q Consensus 109 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~---~~~---~~~~~~~~ 182 (340)
.-+|.|.|.+. + ..++++..|=|+++ ..-++..|...++|+|+|.-+-........ ... ....|...
T Consensus 54 a~~A~Gyar~t---g-~~v~~~TsGpG~~N---~~~gia~A~~~~vPll~itg~~~~~~~~~~~~~~~~~g~~~~~d~~~ 126 (568)
T 2wvg_A 54 GFSAEGYARAK---G-AAAAVVTYSVGALS---AFDAIGGAYAENLPVILISGAPNNNDHAAGHVLHHALGKTDYHYQLE 126 (568)
T ss_dssp HHHHHHHHHHH---S-CEEEEECTTTTHHH---HHHHHHHHHHTTCCEEEEEEECCGGGTTTTCBCTTSCSSSCCCHHHH
T ss_pred HHHHHHHHHhh---C-CeEEEEeCCCCHHH---HHHHHHHHhhhCCCEEEEeCCCChhHhccCcceeeeccccchHHHHH
Confidence 45677777553 4 45566666777765 566788899999999999876543321110 000 01125677
Q ss_pred hhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEE
Q 019498 183 KGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 226 (340)
Q Consensus 183 ~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t 226 (340)
.++.+--....+. +++++...+.+|+..+..++||+.|++-.
T Consensus 127 ~~~~~tk~~~~v~--~~~~~~~~l~~A~~~A~~~~GPV~l~iP~ 168 (568)
T 2wvg_A 127 MAKNITAAAEAIY--TPEEAPAKIDHVIKTALREKKPVYLEIAC 168 (568)
T ss_dssp HHTTSCSCEEEEC--SGGGHHHHHHHHHHHHHHHTCCEEEEEEG
T ss_pred HHHhhEeEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEEech
Confidence 8888877788887 77778888888887777778999999865
No 55
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}
Probab=94.11 E-value=0.067 Score=51.43 Aligned_cols=114 Identities=15% Similarity=0.194 Sum_probs=64.9
Q ss_pred chhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccc-cccCccCccchhhh-h
Q 019498 107 TQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIST-PISDQFRSDGAVVK-G 184 (340)
Q Consensus 107 ~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~-~~~~~~~~~~~~~~-a 184 (340)
..+.+|+|+|++ ..+.++...|.|-.. ..+.|..++..++|+|+++-+-...... +.....+ ..+..+ +
T Consensus 75 ~a~~~a~Gaa~a-----G~r~~~~ts~~G~~~---~~d~l~~aa~~~~P~Vi~~~~~~~~~~g~~~~~~~s-d~~~~~~~ 145 (395)
T 1yd7_A 75 ASIAAAIGASWA-----GAKAMTATSGPGFSL---MQENIGYAVMTETPVVIVDVQRSGPSTGQPTLPAQG-DIMQAIWG 145 (395)
T ss_dssp HHHHHHHHHHHT-----TCCEEEEEETTHHHH---HTTTCC----CCCCEEEEEEC------------------------
T ss_pred HHHHHHHHHHHh-----CCcEEEEeCchHHHH---HHHHHHHHHhcCCCEEEEEeeCCCCCCCCCcccchh-HHHHHHhc
Confidence 346667777766 345677777887753 3555666777889998887665432211 1111111 111222 2
Q ss_pred h--hcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEecCCCCC
Q 019498 185 R--AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHT 233 (340)
Q Consensus 185 ~--a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~~gHs 233 (340)
. .+|++++... ++.+++..+..|++.+++.+.|+++....+ . +|+
T Consensus 146 ~~g~~g~~vl~p~--~~qea~~l~~~A~~lA~~~~~PVi~~~~~~-l-~h~ 192 (395)
T 1yd7_A 146 THGDHSLIVLSPS--TVQEAFDFTIRAFNLSEKYRTPVILLTDAE-V-GHM 192 (395)
T ss_dssp ---CCCCEEECCC--SHHHHHHHHHHHHHHHHHHTSEEEEEECHH-H-HHC
T ss_pred cCCCcceEEEeCC--CHHHHHHHHHHHHHHHHHHCCCEEEEcchh-H-hCe
Confidence 2 3578887776 999999999999988777789999987664 2 454
No 56
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=93.97 E-value=0.18 Score=51.83 Aligned_cols=108 Identities=17% Similarity=0.131 Sum_probs=75.7
Q ss_pred hhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccccccCccCccchhhhhhhc
Q 019498 108 QLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAY 187 (340)
Q Consensus 108 ~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~ 187 (340)
..-+|.|.|.+. +...+++|..|=|+++ ..-++..|..-++|+|+|+-+-........ .....|....++.+
T Consensus 132 Aa~aAdGyAr~t---Gkpgvv~~TsGpG~~N---~~~gia~A~~d~vPllvItG~~~~~~~g~~--a~Q~~Dq~~i~~~~ 203 (677)
T 1t9b_A 132 AGHMAEGYARAS---GKPGVVLVTSGPGATN---VVTPMADAFADGIPMVVFTGQVPTSAIGTD--AFQEADVVGISRSC 203 (677)
T ss_dssp HHHHHHHHHHHH---SSCEEEEECSTHHHHT---THHHHHHHHHHTCCEEEEEEECCTTTTTSC--CTTCCCHHHHTGGG
T ss_pred HHHHHHHHHHHH---CCCEEEEECCChHHHH---HHHHHHHHHHcCCCEEEEeCCCChhhcCCC--CccccCHHHHhhhh
Confidence 345677777653 4445677777888776 456688888889999999865433221111 11123566777777
Q ss_pred CceEEEEcCCCHHHHHHHHHHHHHHhHcc-CCCEEEEEE
Q 019498 188 GVRSIRVDGNDALAIYSAVHAAREMAIGE-GRPILIEAL 225 (340)
Q Consensus 188 G~~~~~VdG~d~~~v~~a~~~a~~~~r~~-~~P~lIe~~ 225 (340)
--....|. +++++...+.+|+..+..+ .||++|++-
T Consensus 204 tk~~~~v~--~~~~i~~~i~~A~~~A~~grpGPV~l~lP 240 (677)
T 1t9b_A 204 TKWNVMVK--SVEELPLRINEAFEIATSGRPGPVLVDLP 240 (677)
T ss_dssp SSEEEECC--SGGGHHHHHHHHHHHHHSSSCCEEEEEEE
T ss_pred eeEEEEcC--CHHHHHHHHHHHHHHHhhCCCceEEEEcC
Confidence 76777787 8889999999999888876 589999886
No 57
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=93.68 E-value=0.24 Score=50.35 Aligned_cols=103 Identities=12% Similarity=0.062 Sum_probs=68.3
Q ss_pred hhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCcc-ccccccCccCccchhhhhhh
Q 019498 108 QLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWA-ISTPISDQFRSDGAVVKGRA 186 (340)
Q Consensus 108 ~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~-~~~~~~~~~~~~~~~~~a~a 186 (340)
.+++|.|+|++ .-++++.++++... =.+-+.++.++..++|+++++.+-++. ...++.. ...|++-+..-
T Consensus 373 ~~~~a~G~A~~-----G~rp~~~~~~~F~~--~a~dqi~~~~a~~~~pvv~~~~~~g~~g~~G~tH~--~~~d~~~~~~i 443 (621)
T 2o1s_A 373 AVTFAAGLAIG-----GYKPIVAIYSTFLQ--RAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQ--GAFDLSYLRCI 443 (621)
T ss_dssp HHHHHHHHHHT-----TCEEEEEEETTGGG--GGHHHHHHTTTTTTCCCEEEEESCBCCCTTCGGGC--BCSHHHHTTTS
T ss_pred HHHHHHHHHHC-----CCEEEEEehHhHHH--HHHHHHHHHHHhcCCCEEEEEECCccCCCCCCccC--chHHHHHHhcC
Confidence 35567777764 24677778888653 233344677888999999999876652 1233332 22344444333
Q ss_pred cCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEE
Q 019498 187 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 224 (340)
Q Consensus 187 ~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~ 224 (340)
-|+.++.-. |+.+++..++.|++. .++|++|-.
T Consensus 444 P~l~v~~P~--d~~e~~~~l~~a~~~---~~~Pv~i~~ 476 (621)
T 2o1s_A 444 PEMVIMTPS--DENECRQMLYTGYHY---NDGPSAVRY 476 (621)
T ss_dssp TTCEEECCS--SHHHHHHHHHHHHHC---CSSCEEEEC
T ss_pred CCCEEEecC--CHHHHHHHHHHHHHc---CCCCEEEEe
Confidence 488887766 999999999998863 378998854
No 58
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=93.67 E-value=0.17 Score=51.29 Aligned_cols=107 Identities=14% Similarity=0.033 Sum_probs=69.7
Q ss_pred hhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccccccCccCccchhhhhhhcC
Q 019498 109 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 188 (340)
Q Consensus 109 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G 188 (340)
.-+|.|.|.+. +...++++..|=|+++ ..-++..|..-++|+|+|.-.-........ .....|....++.+-
T Consensus 63 a~aA~GyAr~t---g~~gv~~~TsGpG~~N---~~~gia~A~~~~vPvl~itG~~~~~~~~~~--~~Q~~d~~~~~~~~t 134 (603)
T 4feg_A 63 AMAAAADAKLT---GKIGVCFGSAGPGGTH---LMNGLYDAREDHVPVLALIGQFGTTGMNMD--TFQEMNENPIYADVA 134 (603)
T ss_dssp HHHHHHHHHHH---SSCEEEEECTTHHHHT---THHHHHHHHHTTCCEEEEEEECCTTTTTSC--CTTCCCCGGGGTTTC
T ss_pred HHHHHHHHHHh---CCceEEEecCCchHHH---HHHHHHHHHHcCCCEEEEecCCcccccCCC--ccccccHHHHhhhhc
Confidence 44666776553 4445666677888886 456688889999999999854322211110 111235566777776
Q ss_pred ceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEE
Q 019498 189 VRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEAL 225 (340)
Q Consensus 189 ~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~ 225 (340)
-....|. +++++...+.+|+..+...+||+.|++-
T Consensus 135 k~~~~v~--~~~~~~~~i~~A~~~A~~~~GPV~l~iP 169 (603)
T 4feg_A 135 DYNVTAV--NAATLPHVIDEAIRRAYAHQGVAVVQIP 169 (603)
T ss_dssp SEEEECC--CSTTHHHHHHHHHHHHHHHTSEEEEEEE
T ss_pred eEEEEcC--CHHHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 6677776 6666777777777666667899999874
No 59
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=93.52 E-value=0.19 Score=50.37 Aligned_cols=110 Identities=19% Similarity=0.125 Sum_probs=69.0
Q ss_pred hhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCcccccccc---CccCccc-hhhhh
Q 019498 109 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPIS---DQFRSDG-AVVKG 184 (340)
Q Consensus 109 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~---~~~~~~~-~~~~a 184 (340)
.-+|.|.|.+. +...+++|..|=|.++ ..-++..|...++|+|+|.-+-......... .+....| ....+
T Consensus 72 a~~A~GyAr~t---gkp~v~~~TsGpG~~N---~~~gv~~A~~~~vPll~itg~~~~~~~~~~~~~~~~~q~~d~q~~~~ 145 (565)
T 2nxw_A 72 GFAADAAARYS---STLGVAAVTYGAGAFN---MVNAVAGAYAEKSPVVVISGAPGTTEGNAGLLLHHQGRTLDTQFQVF 145 (565)
T ss_dssp HHHHHHHHHHH---TSCEEEEECTTHHHHT---THHHHHHHHHTTCCEEEEEEECCTTCC--CCCC-------CHHHHHH
T ss_pred HHHHHHHHHHh---CCCeEEEECCCCCHHH---HHHHHHHHHhhCCCEEEEeCCCChhhhccCcceeeeccchhhHHHHH
Confidence 34677777653 3344556666777776 4566888889999999998664322211100 0001123 56677
Q ss_pred hhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEE
Q 019498 185 RAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 226 (340)
Q Consensus 185 ~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t 226 (340)
+.+--....+. +++++...+.+|+..+...+||+.|++-.
T Consensus 146 ~~~~k~~~~v~--~~~~~~~~i~~A~~~A~~~~GPV~l~iP~ 185 (565)
T 2nxw_A 146 KEITVAQARLD--DPAKAPAEIARVLGAARAQSRPVYLEIPR 185 (565)
T ss_dssp TTSCSCEEECC--CTTTHHHHHHHHHHHHHHHTCCEEEEEEG
T ss_pred HhhheEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEECCh
Confidence 77766677776 66667777777776666668999999874
No 60
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=93.52 E-value=0.18 Score=50.45 Aligned_cols=110 Identities=15% Similarity=0.161 Sum_probs=73.7
Q ss_pred hhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccccccCccCccchhhhhhhcC
Q 019498 109 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 188 (340)
Q Consensus 109 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G 188 (340)
.-+|.|.|.+. +...+++|..|=|.++ ..-++..|..-++|+|+|.-+-...............|....++.+-
T Consensus 58 a~~A~Gyar~t---g~pgv~~~TsGpG~~N---~~~gi~~A~~~~vPll~itg~~~~~~~~~~~~~~Q~~dq~~~~~~~t 131 (564)
T 2q28_A 58 GYAAAASGFLT---QKPGICLTVSAPGFLN---GLTALANATVNGFPMIMISGSSDRAIVDLQQGDYEELDQMNAAKPYA 131 (564)
T ss_dssp HHHHHHHHHHH---SSCEEEEECSHHHHHH---HHHHHHHHHHHTCCEEEEEEECCHHHHHTTSCCTTCCCHHHHHGGGS
T ss_pred HHHHHHHHHHh---CCCEEEEEccCchHHH---HHHHHHHHHhcCCCEEEEeCCCCccccCCCCCccccccHHHHHHHhh
Confidence 34567776553 3444566666777665 56678888899999999987654322110001111235667788887
Q ss_pred ceEEEEcCCCHHHHHHHHHHHHHHhHcc-CCCEEEEEEE
Q 019498 189 VRSIRVDGNDALAIYSAVHAAREMAIGE-GRPILIEALT 226 (340)
Q Consensus 189 ~~~~~VdG~d~~~v~~a~~~a~~~~r~~-~~P~lIe~~t 226 (340)
-....|. +++++...+.+|+..+..+ .||+.|++-.
T Consensus 132 k~~~~v~--~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~ 168 (564)
T 2q28_A 132 KAAFRVN--QPQDLGIALARAIRVSVSGRPGGVYLDLPA 168 (564)
T ss_dssp SEEEECC--SGGGHHHHHHHHHHHHHSSSCCEEEEEEEH
T ss_pred heeeecC--CHHHHHHHHHHHHHHHhcCCCceEEEEcCH
Confidence 7778887 7888888888888888774 5999998754
No 61
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=93.31 E-value=0.19 Score=50.37 Aligned_cols=110 Identities=15% Similarity=0.094 Sum_probs=73.3
Q ss_pred hhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccccccCccCccchhhhhhhcC
Q 019498 109 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 188 (340)
Q Consensus 109 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G 188 (340)
.-+|.|.|.+. +...+++|..|=|.++ ..-++..|..-++|+|+|.-+-...............|....++.+-
T Consensus 60 a~~A~GyAr~t---g~pgv~~~TsGpG~~N---~~~~i~~A~~~~vPll~itg~~~~~~~~~~~~~~Q~~dq~~~~~~~t 133 (568)
T 2c31_A 60 GYAASIAGYIE---GKPGVCLTVSAPGFLN---GVTSLAHATTNCFPMILLSGSSEREIVDLQQGDYEEMDQMNVARPHC 133 (568)
T ss_dssp HHHHHHHHHHH---SSCEEEEECSHHHHHH---HHHHHHHHHHHTCCEEEEEEECCHHHHHTTCCCTTCCCHHHHSGGGS
T ss_pred HHHHHHHHHHh---CCCEEEEEcCCccHHH---HHHHHHHHHhcCCCEEEEccCCCccccCCCCCcccccCHHHHHHhhh
Confidence 34566776553 3444666666777765 56778889999999999986654322110001111235667777777
Q ss_pred ceEEEEcCCCHHHHHHHHHHHHHHhHc-cCCCEEEEEEE
Q 019498 189 VRSIRVDGNDALAIYSAVHAAREMAIG-EGRPILIEALT 226 (340)
Q Consensus 189 ~~~~~VdG~d~~~v~~a~~~a~~~~r~-~~~P~lIe~~t 226 (340)
-....+. +++++...+.+|+..+.. ..||+.|++-.
T Consensus 134 k~~~~v~--~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~ 170 (568)
T 2c31_A 134 KASFRIN--SIKDIPIGIARAVRTAVSGRPGGVYVDLPA 170 (568)
T ss_dssp SEEEECC--SGGGHHHHHHHHHHHHHSSSCCEEEEEEET
T ss_pred heeeecC--CHHHHHHHHHHHHHHhcCCCCceEEEeCCH
Confidence 7777787 788888888889888777 45899998743
No 62
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=93.27 E-value=0.18 Score=50.83 Aligned_cols=108 Identities=19% Similarity=0.014 Sum_probs=72.7
Q ss_pred chhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccccccCccCccchhhhhhh
Q 019498 107 TQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRA 186 (340)
Q Consensus 107 ~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a 186 (340)
...-+|.|.|.+. +.-.++++..|=|.++ ..-++..|...++|+|+|+-+-..........| ..|....++.
T Consensus 54 ~Aa~~A~GyAr~t---gk~~v~~~tsGpG~~N---~~~gl~~A~~~~vPll~Itg~~p~~~~g~~~~Q--~~d~~~~~~~ 125 (590)
T 1v5e_A 54 VGAMAAVMQSKFG---GNLGVTVGSGGPGASH---LINGLYDAAMDNIPVVAILGSRPQRELNMDAFQ--ELNQNPMYDH 125 (590)
T ss_dssp HHHHHHHHHHHTT---CCCCEEEECTTHHHHT---THHHHHHHHHHTCCEEEEEEECCGGGTTTTCTT--CCCCHHHHHT
T ss_pred HHHHHHHHHHHHH---CCCEEEEeCcChHHHH---HHHHHHHHHhcCCCEEEEcCCCCcccCCCCccc--ccCHHHHHHh
Confidence 3345666666542 3445566666777776 455677888889999999876544322111111 2356677777
Q ss_pred cCceEEEEcCCCHHHHHHHHHHHHHHhHccC-CCEEEEEE
Q 019498 187 YGVRSIRVDGNDALAIYSAVHAAREMAIGEG-RPILIEAL 225 (340)
Q Consensus 187 ~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~-~P~lIe~~ 225 (340)
+--....+. +++++...+.+|+..+..++ ||+.| +-
T Consensus 126 ~tk~~~~v~--~~~~~~~~i~~A~~~A~~~~~GPV~l-iP 162 (590)
T 1v5e_A 126 IAVYNRRVA--YAEQLPKLVDEAARMAIAKRGVAVLE-VP 162 (590)
T ss_dssp TCSEEEECC--SGGGHHHHHHHHHHHHHHTTSEEEEE-EE
T ss_pred hccEEEEeC--CHHHHHHHHHHHHHHHhcCCCceEEE-Ec
Confidence 766677777 88888899999988887776 89999 53
No 63
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=93.17 E-value=0.47 Score=48.20 Aligned_cols=100 Identities=17% Similarity=0.133 Sum_probs=65.0
Q ss_pred hhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccc--cccccCccCccchhhhhhh
Q 019498 109 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGRA 186 (340)
Q Consensus 109 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~--~~~~~~~~~~~~~~~~a~a 186 (340)
+++|+|+|++ +..+++++.++++.. ..++.+..++..++|+++++.+-+++. ..++. .+..|++-+..-
T Consensus 368 v~~a~G~A~~----G~~~~~~~~f~~Fl~---~a~dqi~~~a~~~~~v~~v~~~~g~~~G~dG~tH--~~~ed~a~l~~i 438 (616)
T 3mos_A 368 VSIAVGCATR----NRTVPFCSTFAAFFT---RAFDQIRMAAISESNINLCGSHCGVSIGEDGPSQ--MALEDLAMFRSV 438 (616)
T ss_dssp HHHHHHHHGG----GCCEEEEEEEGGGGG---GGHHHHHHHHHTTCCEEEEEESBSGGGCTTCGGG--CBSSHHHHHHTS
T ss_pred HHHHHHHHHc----CCCCEEEEehHHHHH---HHHHHHHHHHHhCCCeEEEEECCCccccCCCCcc--cCHHHHHHhcCC
Confidence 3445555543 433567778998875 457778888889999999988777643 23322 233445444433
Q ss_pred cCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEE
Q 019498 187 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 223 (340)
Q Consensus 187 ~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe 223 (340)
-|+.++.-. |+.++..+++.|.+ .++|++|-
T Consensus 439 P~l~V~~P~--d~~e~~~~l~~a~~----~~gp~~ir 469 (616)
T 3mos_A 439 PTSTVFYPS--DGVATEKAVELAAN----TKGICFIR 469 (616)
T ss_dssp TTEEEECCC--SHHHHHHHHHHHHT----CCSEEEEE
T ss_pred CCCEEEecC--CHHHHHHHHHHHHh----cCCCEEEE
Confidence 466655444 89999999888875 47898774
No 64
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=92.45 E-value=0.3 Score=49.70 Aligned_cols=103 Identities=17% Similarity=0.100 Sum_probs=66.6
Q ss_pred hhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCcc-ccccccCccCccchhhhhhh
Q 019498 108 QLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWA-ISTPISDQFRSDGAVVKGRA 186 (340)
Q Consensus 108 ~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~-~~~~~~~~~~~~~~~~~a~a 186 (340)
.+++|+|+|++ .-++++.++.+... =.+-+.++.++..++|+++++.+-++. -..++... ..|++-+..-
T Consensus 376 ~~~~a~G~A~~-----G~rp~~~~~~~F~~--~a~dqi~~~~a~~~~pvv~~~~~~g~~g~dG~tH~~--~~d~a~~r~i 446 (629)
T 2o1x_A 376 AVTTAAGMALQ-----GMRPVVAIYSTFLQ--RAYDQVLHDVAIEHLNVTFCIDRAGIVGADGATHNG--VFDLSFLRSI 446 (629)
T ss_dssp HHHHHHHHHHT-----TCEEEEEEEHHHHG--GGHHHHHHTTTTTTCCCEEEEESBBCCCTTCTTTCB--CSHHHHTTTS
T ss_pred HHHHHHHHHHc-----CCEEEEEecHHHHH--HHHHHHHHHHhhcCCCEEEEEECCccCCCCCcccCc--cHHHHHHHcc
Confidence 35567777764 24667777776542 123344677889999999999776652 12333222 2344433333
Q ss_pred cCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEE
Q 019498 187 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEAL 225 (340)
Q Consensus 187 ~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~ 225 (340)
-|+.++.-. |+.+++..++.|++ .++|++|-..
T Consensus 447 P~l~v~~P~--d~~e~~~~~~~a~~----~~~Pv~i~~~ 479 (629)
T 2o1x_A 447 PGVRIGLPK--DAAELRGMLKYAQT----HDGPFAIRYP 479 (629)
T ss_dssp TTCEEECCS--SHHHHHHHHHHHHH----SSSCEEEECC
T ss_pred CCcEEEecC--CHHHHHHHHHHHHh----CCCCEEEEec
Confidence 488777666 99999999999987 3789988543
No 65
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=92.43 E-value=0.58 Score=47.31 Aligned_cols=109 Identities=16% Similarity=0.140 Sum_probs=73.4
Q ss_pred hhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccccccCccCccchhhhhhhcC
Q 019498 109 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 188 (340)
Q Consensus 109 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G 188 (340)
.-+|.|.|.+.. ++-.++++..|=|+++ ..-++..|..-++|+|+|+-+-......... ....|....++.+-
T Consensus 78 a~~A~GyAr~tg--g~~~v~~~TsGpG~~N---~~~~l~~A~~~~vPlvvItg~~p~~~~~~~~--~Q~~d~~~~~~~~t 150 (616)
T 2pan_A 78 SHMAEGYTRATA--GNIGVCLGTSGPAGTD---MITALYSASADSIPILCITGQAPRARLHKED--FQAVDIEAIAKPVS 150 (616)
T ss_dssp HHHHHHHHHHST--TCCEEEEECSTHHHHT---SHHHHHHHHHTTCCEEEEEEECCGGGTTTTC--TTCCCHHHHHGGGS
T ss_pred HHHHHHHHHhcC--CCceEEEeCCCchHHH---HHHHHHHHHhcCCCEEEEecCCcccccCccc--ccccCHHHHHHHHH
Confidence 446667765520 2333455666777776 3566888888999999998665433221111 11246777888887
Q ss_pred ceEEEEcCCCHHHHHHHHHHHHHHhHcc-CCCEEEEEEE
Q 019498 189 VRSIRVDGNDALAIYSAVHAAREMAIGE-GRPILIEALT 226 (340)
Q Consensus 189 ~~~~~VdG~d~~~v~~a~~~a~~~~r~~-~~P~lIe~~t 226 (340)
-....+. +++++...+++|+..++.+ .||+.|++-.
T Consensus 151 k~~~~v~--~~~~i~~~l~~A~~~A~~~r~GPV~l~iP~ 187 (616)
T 2pan_A 151 KMAVTVR--EAALVPRVLQQAFHLMRSGRPGPVLVDLPF 187 (616)
T ss_dssp SEEEECC--SGGGHHHHHHHHHHHHHSSSCCCEEEEEEH
T ss_pred HhhcccC--CHHHHHHHHHHHHHHHhcCCCceEEEEcch
Confidence 7777786 7888999999999887776 4899998754
No 66
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=92.25 E-value=0.87 Score=46.71 Aligned_cols=101 Identities=11% Similarity=0.004 Sum_probs=66.6
Q ss_pred hhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccc--cccccCccCccchhhhhhh
Q 019498 109 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGRA 186 (340)
Q Consensus 109 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~--~~~~~~~~~~~~~~~~a~a 186 (340)
+++|.|+|+. +.-+++++.+...+. ..++++..++..++||++++.+.+++. ..++. .+..|++-+..-
T Consensus 415 v~~a~GlA~~----gG~~P~~~tf~~F~~---~~~~~ir~~a~~~lpvv~~~t~~g~~~G~dG~tH--q~~edla~lr~i 485 (669)
T 2r8o_A 415 TAIANGISLH----GGFLPYTSTFLMFVE---YARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTH--QPVEQVASLRVT 485 (669)
T ss_dssp HHHHHHHHHH----SSCEEEEEEEGGGGG---TTHHHHHHHHHTTCCCEEEEECCSGGGCTTCTTT--CCSSHHHHHHTS
T ss_pred HHHHHHHHHc----CCCeEEEeehHHHHH---HHHHHHHHHHhcCCCEEEEEeCCCcCcCCCCCcc--CCHHHHHHhcCC
Confidence 4566777664 223456666654433 346778889999999999998877763 33433 233445544333
Q ss_pred cCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEE
Q 019498 187 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 223 (340)
Q Consensus 187 ~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe 223 (340)
-|+.++.-- |..++..+++.|++. .++|++|-
T Consensus 486 P~l~V~~Pa--d~~E~~~~l~~a~~~---~~~Pv~i~ 517 (669)
T 2r8o_A 486 PNMSTWRPC--DQVESAVAWKYGVER---QDGPTALI 517 (669)
T ss_dssp TTCEEECCS--SHHHHHHHHHHHHHC---SSSCEEEE
T ss_pred CCCEEEecC--CHHHHHHHHHHHHHh---CCCcEEEE
Confidence 477666545 899999999999862 37899884
No 67
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=92.20 E-value=0.29 Score=49.45 Aligned_cols=108 Identities=13% Similarity=0.024 Sum_probs=69.6
Q ss_pred hhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccccccCccCccchhhhhhhcC
Q 019498 109 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 188 (340)
Q Consensus 109 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G 188 (340)
.-+|.|.|.+. +...+++|..|=|+++ ..-++..|..-++|+|+|.-+-..........+ ..|....++.+-
T Consensus 82 a~aA~GyAr~t---gkpgv~~~TsGpG~~N---~~~gia~A~~~~vPlv~ItG~~~~~~~g~~~~Q--~~d~~~~~~~~t 153 (604)
T 2x7j_A 82 GFFALGLAKAK---QRPVLLICTSGTAAAN---FYPAVVEAHYSRVPIIVLTADRPHELREVGAPQ--AINQHFLFGNFV 153 (604)
T ss_dssp HHHHHHHHHHH---TSCEEEEECSSHHHHT---THHHHHHHHHHTCCEEEEEEECCGGGSSSCCTT--CCCCTTTTGGGS
T ss_pred HHHHHHHHHhh---CCCEEEEECChhHHHH---HHHHHHHHhhcCCCEEEEeCCCCHHHhCCCCCC--cCcHHHHhhhhe
Confidence 44677776553 4445666777888886 456688888899999999866443221111111 234555666665
Q ss_pred ceEEEEcCCCHHH-------HHHHHHHHHHHhHc-cCCCEEEEEEE
Q 019498 189 VRSIRVDGNDALA-------IYSAVHAAREMAIG-EGRPILIEALT 226 (340)
Q Consensus 189 ~~~~~VdG~d~~~-------v~~a~~~a~~~~r~-~~~P~lIe~~t 226 (340)
-....|. ++++ +...+.+|+..+.. ..||+.|++-.
T Consensus 154 k~~~~v~--~~~~~~~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~ 197 (604)
T 2x7j_A 154 KFFTDSA--LPEESPQMLRYIRTLASRAAGEAQKRPMGPVHVNVPL 197 (604)
T ss_dssp SCEEECC--CCCCSHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEEC
T ss_pred eeeeecC--CCcccchhHHHHHHHHHHHHHHhhCCCCCcEEEEccc
Confidence 5566665 4443 77778888877776 45999999865
No 68
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=92.09 E-value=0.77 Score=46.93 Aligned_cols=102 Identities=15% Similarity=0.085 Sum_probs=67.4
Q ss_pred hhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccc--cccccCccCccchhhhhhh
Q 019498 109 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGRA 186 (340)
Q Consensus 109 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~--~~~~~~~~~~~~~~~~a~a 186 (340)
+++|.|+|+. +.-++++..+.=.+. ..++++..++..++||++++.+.+++. ..++. .+..|++-+..-
T Consensus 410 ~~~a~GlA~~----Gg~~P~~~t~~~F~~---~~~~air~~a~~~lpvv~~~t~~g~g~G~dG~tH--q~~edla~lr~i 480 (651)
T 2e6k_A 410 GAILNGLNLH----GGYRAYGGTFLVFSD---YMRPAIRLAALMGVPTVFVFTHDSIALGEDGPTH--QPVEHLMSLRAM 480 (651)
T ss_dssp HHHHHHHHHH----SSCEEEEEEEGGGGG---GSHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT--CCSSHHHHHHTS
T ss_pred HHHHHHHHHc----CCCEEEEEeHHHHHH---HHHHHHHHHHhcCCCEEEEEECCccccCCCcCcc--ccHHHHHHhcCC
Confidence 4567777665 323556665532221 346778889999999999998888764 33433 233455544333
Q ss_pred cCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEE
Q 019498 187 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 224 (340)
Q Consensus 187 ~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~ 224 (340)
-|+.++.-. |+.++..+++.|++. .++|++|-.
T Consensus 481 P~l~V~~Pa--d~~E~~~~l~~A~~~---~~~Pv~i~~ 513 (651)
T 2e6k_A 481 PNLFVIRPA--DAYETFYAWLVALRR---KEGPTALVL 513 (651)
T ss_dssp TTCEEECCS--SHHHHHHHHHHHHHC---CSSCEEEEC
T ss_pred CCcEEEecC--CHHHHHHHHHHHHHc---CCCCEEEEE
Confidence 477777655 899999999999862 368998864
No 69
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B
Probab=92.01 E-value=0.45 Score=44.48 Aligned_cols=101 Identities=16% Similarity=0.081 Sum_probs=63.3
Q ss_pred chhhHHHHHHHHhhhcCCCCeEEEE-ECCcccCcchHHHHHH-HHHh--------CCCCEEEEEEeCCccccccccCccC
Q 019498 107 TQLPHAVGAAYALKMDRKDACAVTY-FGDGGTSEGDFHAALN-FSAV--------TEAPVIFICRNNGWAISTPISDQFR 176 (340)
Q Consensus 107 ~~lp~A~G~A~a~k~~~~~~~vv~~-~GDG~~~~G~~~Eal~-~A~~--------~~Lpvi~vv~nN~~~~~~~~~~~~~ 176 (340)
..+++|.|+|++ + -++++++ ++++. + ..++.+. .++. +++|+++++.+-+ +...++. .+
T Consensus 63 ~~~~~a~G~A~~----G-~rp~~~~t~~~F~-~--~a~dqi~~~~a~~~~~~~~~~~~pvv~~~~~~g-~~~G~th--~s 131 (338)
T 1qs0_B 63 GIVGTAVGMGAY----G-LRPVVEIQFADYF-Y--PASDQIVSEMARLRYRSAGEFIAPLTLRMPCGG-GIYGGQT--HS 131 (338)
T ss_dssp HHHHHHHHHHHH----T-CEEEEECSCGGGC-G--GGHHHHHTTTTTHHHHTTTSSCCCCEEEEEECC-SSSCCSS--SS
T ss_pred HHHHHHHHHHhC----C-CEEEEEeccHhHH-H--HHHHHHHHHHHHHhhhcCCCCCCCEEEEEeCCC-CCCCccc--cc
Confidence 446678888776 2 3444444 88886 3 3455553 3443 3599999986654 3333322 22
Q ss_pred ccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEE
Q 019498 177 SDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 224 (340)
Q Consensus 177 ~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~ 224 (340)
..|+.-+..-.|+.++.-. |+.+.+..++.|++ .++|++|-.
T Consensus 132 ~~d~~~l~~iP~l~V~~Ps--d~~e~~~~l~~A~~----~~~Pv~i~~ 173 (338)
T 1qs0_B 132 QSPEAMFTQVCGLRTVMPS--NPYDAKGLLIASIE----CDDPVIFLE 173 (338)
T ss_dssp CCCHHHHTTSTTCEEECCC--SHHHHHHHHHHHHH----SSSCEEEEE
T ss_pred ccHHHHHhcCCCCEEEeeC--CHHHHHHHHHHHHh----cCCcEEEEE
Confidence 3355433333488888766 99999999999886 378998844
No 70
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=91.93 E-value=0.9 Score=46.66 Aligned_cols=102 Identities=18% Similarity=0.103 Sum_probs=65.6
Q ss_pred hhHHHHHHHHhhhcC-CCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccc--cccccCccCccchhhhhh
Q 019498 109 LPHAVGAAYALKMDR-KDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGR 185 (340)
Q Consensus 109 lp~A~G~A~a~k~~~-~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~--~~~~~~~~~~~~~~~~a~ 185 (340)
+++|.|+|+ .+ .-++++.++...+. ..++++..++..++||++++...+.+. .+++. .+..|++-+..
T Consensus 427 v~~a~GlA~----~G~~~~P~~~t~~~F~~---~~~~~ir~~a~~~lpvv~~~t~~g~g~G~dG~tH--q~~edla~lr~ 497 (675)
T 1itz_A 427 GAICNGIAL----HSPGFVPYCATFFVFTD---YMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTH--QPIEHLVSFRA 497 (675)
T ss_dssp HHHHHHHHT----TCTTCEEEEEEEGGGHH---HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT--CCSSHHHHHHS
T ss_pred HHHHHHHHh----cCCCCEEEEEEHHHHHH---HHHHHHHHHHhcCCCEEEEEECCccccCCCCCCc--CcHHHHHHhcc
Confidence 345666554 34 24566666655442 457788889999999999997777653 33433 23344444333
Q ss_pred hcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEE
Q 019498 186 AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 224 (340)
Q Consensus 186 a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~ 224 (340)
--|+.++.- .|+.++..+++.|++. .++|++|-.
T Consensus 498 iP~l~V~~P--ad~~e~~~~l~~a~~~---~~~Pv~i~~ 531 (675)
T 1itz_A 498 MPNILMLRP--ADGNETAGAYKVAVLN---RKRPSILAL 531 (675)
T ss_dssp SSSCEEECC--CSHHHHHHHHHHHHHC---TTSCEEEEE
T ss_pred CCCeEEEEC--CCHHHHHHHHHHHHHh---CCCcEEEEe
Confidence 236555544 4899999999998862 378998854
No 71
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=91.78 E-value=0.33 Score=48.07 Aligned_cols=112 Identities=21% Similarity=0.050 Sum_probs=71.9
Q ss_pred cchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccccccCccCccchhhhhh
Q 019498 106 ATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGR 185 (340)
Q Consensus 106 G~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~ 185 (340)
....-+|.|.|.+. +...++++..|=|..+ ..-++..|...++|+|+|.-+-..........+. ..|....++
T Consensus 48 ~~Aa~~A~Gyar~t---g~~~v~~~tsGpG~~N---~~~~l~~A~~~~~Pll~itg~~~~~~~~~~~~q~-~~d~~~~~~ 120 (528)
T 1q6z_A 48 ACVVGIADGYAQAS---RKPAFINLHSAAGTGN---AMGALSNAWNSHSPLIVTAGQQTRAMIGVEALLT-NVDAANLPR 120 (528)
T ss_dssp HHHHHHHHHHHHHH---TSCEEEEEEHHHHHHH---THHHHHHHHHTTCCEEEEEEECCHHHHTTTCTTC-CTTGGGSST
T ss_pred HHHHHHHHHHHHHh---CCCEEEEEcCChHHHH---HHHHHHHHhhcCCCEEEEeCCCcccccCCCcccc-cccHHHHHH
Confidence 33345677777653 3444566666777775 4566888889999999998654432211111111 125666666
Q ss_pred hcCceEEEEcCCCHHHHHHHHHHHHHHhHccC-CCEEEEEEE
Q 019498 186 AYGVRSIRVDGNDALAIYSAVHAAREMAIGEG-RPILIEALT 226 (340)
Q Consensus 186 a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~-~P~lIe~~t 226 (340)
.+--...++. +++++...+.+|+..+..++ ||+.|++-.
T Consensus 121 ~~~k~~~~v~--~~~~~~~~i~~A~~~a~~~~~GPV~l~iP~ 160 (528)
T 1q6z_A 121 PLVKWSYEPA--SAAEVPHAMSRAIHMASMAPQGPVYLSVPY 160 (528)
T ss_dssp TSCSCEECCS--SGGGHHHHHHHHHHHHHSSSCCCEEEEEEG
T ss_pred HhhHhhhcCC--CHHHHHHHHHHHHHHHhcCCCCcEEEEech
Confidence 6655566666 77778888888887777654 799998865
No 72
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=91.69 E-value=0.92 Score=46.48 Aligned_cols=102 Identities=13% Similarity=0.047 Sum_probs=67.9
Q ss_pred hhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccc--cccccCccCccchhhhhh
Q 019498 108 QLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGR 185 (340)
Q Consensus 108 ~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~--~~~~~~~~~~~~~~~~a~ 185 (340)
.+++|.|+|+. +.-++++.++.+-.. ..++.+..++..++||+++....+++. ..++. .+..|++-+..
T Consensus 415 ~v~~a~GlA~~----gG~~P~~~tf~~F~~---~~~~~ir~~a~~~lpvv~~~t~~g~g~G~dG~TH--q~~ed~a~lr~ 485 (663)
T 3kom_A 415 MAAIMNGLSLY----GGIKPYGGTFLVFSD---YSRNAIRMSALMKQPVVHVMSHDSIGLGEDGPTH--QPIEHVPSLRL 485 (663)
T ss_dssp HHHHHHHHHHH----SSCEEEEEEEGGGHH---HHHHHHHHHHHTTCCCEEEEECCSGGGCTTCTTT--CCSSHHHHHHT
T ss_pred HHHHHHHHHHc----CCCEEEEEehHHHHH---HHHHHHHHHHhcCCCEEEEEeCCccccCCCCCCc--CCHHHHHHHhc
Confidence 35667777764 234566666655442 346778888999999999987777653 34433 23345554443
Q ss_pred hcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEE
Q 019498 186 AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 223 (340)
Q Consensus 186 a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe 223 (340)
--|+.++.-. |+.++..+++.|++ ..++|++|-
T Consensus 486 iPnl~V~~Pa--d~~e~~~~l~~A~~---~~~~Pv~ir 518 (663)
T 3kom_A 486 IPNLSVWRPA--DTIETMIAWKEAVK---SKDTPSVMV 518 (663)
T ss_dssp STTCEEECCC--SHHHHHHHHHHHHH---CSSCCEEEE
T ss_pred CCCcEEEeeC--CHHHHHHHHHHHHH---hCCCCEEEE
Confidence 3476666555 89999999998885 257999884
No 73
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=91.33 E-value=0.47 Score=47.62 Aligned_cols=110 Identities=10% Similarity=0.064 Sum_probs=67.4
Q ss_pred hhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccccccCccCccchhhhhhhcC
Q 019498 109 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 188 (340)
Q Consensus 109 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G 188 (340)
.-+|.|.|.+. +...+++|..|=|+++ ..-++..|..-++|+|+|.-+-....... ......|....++.+-
T Consensus 62 a~aAdGyAr~t---G~pgv~~~TsGpG~~N---~~~gia~A~~d~vPll~itG~~p~~~~g~--~~~Qe~d~~~~~~~~t 133 (578)
T 3lq1_A 62 GFFALGLAKAS---KRPVVLLCTSGTAAAN---YFPAVAEANLSQIPLIVLTADRPHELRNV--GAPQAMDQLHLYGSHV 133 (578)
T ss_dssp HHHHHHHHHHH---CCCEEEEECSSHHHHT---THHHHHHHHHTTCCEEEEEEECCGGGTTS--SCTTCCCCTTTTGGGS
T ss_pred HHHHHHHHHhh---CCCEEEEECCchhhhh---hhHHHHHHHhcCCCeEEEeCCCCHHhhcC--CCCCCcCHhhHHhhhe
Confidence 34677777553 4456677777888886 45678889999999999985433221111 1111124555666665
Q ss_pred ceEEEEc-CCCHHH----HHHHHHHHHHHhHcc-CCCEEEEEEE
Q 019498 189 VRSIRVD-GNDALA----IYSAVHAAREMAIGE-GRPILIEALT 226 (340)
Q Consensus 189 ~~~~~Vd-G~d~~~----v~~a~~~a~~~~r~~-~~P~lIe~~t 226 (340)
-....|. ..+..+ +..++++|+..+..+ .||+.|++-.
T Consensus 134 k~~~~v~~~~~~~~~~~~i~~~l~~A~~~A~~gr~GPV~l~iP~ 177 (578)
T 3lq1_A 134 KDFTDMALPENSEEMLRYAKWHGSRAVDIAMKTPRGPVHLNFPL 177 (578)
T ss_dssp SEEEECCCCCCSHHHHHHHHHHHHHHHHHHHSSSCCCEEEEEEC
T ss_pred eeEeecCCCCCchHHHHHHHHHHHHHHHHhhCCCCCcEEEECcc
Confidence 4556664 334322 345677777766665 5999999864
No 74
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=91.30 E-value=0.66 Score=43.53 Aligned_cols=100 Identities=16% Similarity=0.072 Sum_probs=61.5
Q ss_pred chhhHHHHHHHHhhhcCCCCeEEEE-ECCcccCcchHHHHHHHH-H--------hCCCCEEEEEEeCCccc-cccccCcc
Q 019498 107 TQLPHAVGAAYALKMDRKDACAVTY-FGDGGTSEGDFHAALNFS-A--------VTEAPVIFICRNNGWAI-STPISDQF 175 (340)
Q Consensus 107 ~~lp~A~G~A~a~k~~~~~~~vv~~-~GDG~~~~G~~~Eal~~A-~--------~~~Lpvi~vv~nN~~~~-~~~~~~~~ 175 (340)
..+++|.|+|++ + -++++.+ ++|.. + ..++.+... + ..++||++++.+ ++.. ..++..+
T Consensus 73 ~~v~~a~G~A~~----G-~rp~~~~~f~~F~-~--~a~dqi~~~~a~~~y~~~g~~~~pvv~~~~~-G~~g~~G~tHs~- 142 (341)
T 2ozl_B 73 GFAGIAVGAAMA----G-LRPICEFMTFNFS-M--QAIDQVINSAAKTYYMSGGLQPVPIVFRGPN-GASAGVAAQHSQ- 142 (341)
T ss_dssp HHHHHHHHHHHT----T-CEEEEECSSGGGG-G--GGHHHHHTTTTTHHHHTTSSCCCCCEEEEEC-SCCSSCCGGGCC-
T ss_pred HHHHHHHHHHHC----C-CEEEEEeccHHHH-H--HHHHHHHHHHHHHHhhccccCCCCEEEEEcC-cCCCCCCcchhh-
Confidence 345677777765 2 3445543 88877 2 345555543 3 278999999985 5322 2333311
Q ss_pred Cccchhhhhhh-cCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEE
Q 019498 176 RSDGAVVKGRA-YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEAL 225 (340)
Q Consensus 176 ~~~~~~~~a~a-~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~ 225 (340)
..+ ...+. -|+.++... |+.+.+..++.|++ .++|++|-..
T Consensus 143 -~~e--a~l~~iP~l~V~~Ps--d~~e~~~~l~~a~~----~~~Pv~i~~~ 184 (341)
T 2ozl_B 143 -CFA--AWYGHCPGLKVVSPW--NSEDAKGLIKSAIR----DNNPVVVLEN 184 (341)
T ss_dssp -CCH--HHHHTSTTCEEECCC--SHHHHHHHHHHHHH----SSSCEEEEEC
T ss_pred -HHH--HHhccCCCCEEEEeC--CHHHHHHHHHHHHh----cCCCEEEEEC
Confidence 112 23333 377777666 99999999999886 3789988553
No 75
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=91.11 E-value=0.92 Score=46.62 Aligned_cols=101 Identities=15% Similarity=0.094 Sum_probs=65.3
Q ss_pred hhHHHHHHHHhhhcCCCC-eEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccc--cccccCccCccchhhhhh
Q 019498 109 LPHAVGAAYALKMDRKDA-CAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGR 185 (340)
Q Consensus 109 lp~A~G~A~a~k~~~~~~-~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~--~~~~~~~~~~~~~~~~a~ 185 (340)
+++|.|+|+. +.-+ +++..+.+-+. ..++++..++..++||++++...+++. .+++. .+..+++-+..
T Consensus 422 vg~a~GlA~~----Gg~~~P~~~~f~~F~~---~~~~air~~a~~~lpvv~v~t~~g~g~G~dG~tH--q~~edla~lr~ 492 (680)
T 1gpu_A 422 GAIMNGISAF----GANYKPYGGTFLNFVS---YAAGAVRLSALSGHPVIWVATHDSIGVGEDGPTH--QPIETLAHFRS 492 (680)
T ss_dssp HHHHHHHHHH----CTTCEEEEEEEHHHHG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT--CCSSHHHHHHT
T ss_pred HHHHHHHHhc----CCCceEEEeehHHHHH---HHHHHHHHHHhcCCCEEEEEeCCccccCCCCCcc--CCHHHHHHhcC
Confidence 4567777664 3235 55655533322 246678889999999999997777653 34443 23344544433
Q ss_pred hcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEE
Q 019498 186 AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 223 (340)
Q Consensus 186 a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe 223 (340)
--|+.++.-- |+.++..+++.|++. .++|++|-
T Consensus 493 iP~l~V~~Pa--d~~e~~~~l~~A~~~---~~~Pv~i~ 525 (680)
T 1gpu_A 493 LPNIQVWRPA--DGNEVSAAYKNSLES---KHTPSIIA 525 (680)
T ss_dssp SSSCEEECCC--SHHHHHHHHHHHHHC---SSCCEEEE
T ss_pred CCCCEEEecC--CHHHHHHHHHHHHHh---CCCcEEEE
Confidence 3466665544 899999999998862 37899884
No 76
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=90.93 E-value=1.2 Score=45.31 Aligned_cols=102 Identities=13% Similarity=-0.024 Sum_probs=67.9
Q ss_pred hhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccc--cccccCccCccchhhhhh
Q 019498 108 QLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGR 185 (340)
Q Consensus 108 ~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~--~~~~~~~~~~~~~~~~a~ 185 (340)
.+++|.|+|+. +.-++++.++.+=. + ..++.+..++..++||+++....+.+. ..++. .+..|++-+..
T Consensus 394 ~v~~a~GlA~~----gG~~P~~~~f~~F~--~-~~~~~ir~~a~~~~pv~~~~t~~g~g~G~dG~TH--q~~ed~a~lr~ 464 (632)
T 3l84_A 394 MAAINNAFARY----GIFLPFSATFFIFS--E-YLKPAARIAALMKIKHFFIFTHDSIGVGEDGPTH--QPIEQLSTFRA 464 (632)
T ss_dssp HHHHHHHHHHH----SSCEEEEEEEGGGH--H-HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCGGG--SCSSHHHHHHH
T ss_pred HHHHHHHHHHc----CCCEEEEEecHHHH--H-HHHHHHHHHhccCCCEEEEEECCCcCCCCCCCCC--CCHhHHHHHhc
Confidence 34667777765 23456666655433 2 456778888899999999998777653 34443 23345554444
Q ss_pred hcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEE
Q 019498 186 AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 224 (340)
Q Consensus 186 a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~ 224 (340)
--|+.++.-- |+.++..+++.|++ .++|++|-.
T Consensus 465 iP~l~V~~P~--d~~e~~~~l~~A~~----~~~Pv~ir~ 497 (632)
T 3l84_A 465 MPNFLTFRPA--DGVENVKAWQIALN----ADIPSAFVL 497 (632)
T ss_dssp SSSCEEECCS--SHHHHHHHHHHHHH----CSSCEEEEC
T ss_pred CCCCEEEecC--CHHHHHHHHHHHHh----CCCCEEEEE
Confidence 3477776655 89999999999986 579998853
No 77
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=90.45 E-value=0.8 Score=45.80 Aligned_cols=110 Identities=15% Similarity=0.043 Sum_probs=69.4
Q ss_pred chhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccccc---cC--cc-Cccch
Q 019498 107 TQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPI---SD--QF-RSDGA 180 (340)
Q Consensus 107 ~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~---~~--~~-~~~~~ 180 (340)
...-+|.|.|.+. + ..++++..|=|+++ ..-++..|...++|+|+|+-+......... .. .. ...+.
T Consensus 74 ~A~~~A~GyAr~t---G-~~v~~~tsGpG~~N---~~~gi~~A~~~~vPlv~itg~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (570)
T 2vbf_A 74 NASYMADGYARTK---K-AAAFLTTFGVGELS---AINGLAGSYAENLPVVEIVGSPTSKVQNDGKFVHHTLADGDFKHF 146 (570)
T ss_dssp HHHHHHHHHHHHH---S-CEEEEEETTHHHHH---HHHHHHHHHHTTCCEEEEEEECCHHHHHHTCCCTTSCSSSCCCHH
T ss_pred HHHHHHHHHHHHh---C-CeEEEEcCCCCHHH---HHHHHHHHhhhCCCEEEEeCCCCHHHhhccccceeeccccchHHH
Confidence 3345677777553 4 44566666767664 566788888999999999976553221110 00 00 11134
Q ss_pred hhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEE
Q 019498 181 VVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 226 (340)
Q Consensus 181 ~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t 226 (340)
...++.+--....+. + +++...+.+|+..+..++||+.|++-.
T Consensus 147 ~~~~~~~tk~~~~v~--~-~~~~~~l~~A~~~A~~~~GPV~l~iP~ 189 (570)
T 2vbf_A 147 MKMHEPVTAARTLLT--A-ENATYEIDRVLSQLLKERKPVYINLPV 189 (570)
T ss_dssp HHHTGGGCSEEEECC--T-TTHHHHHHHHHHHHHHHCCCEEEEEEH
T ss_pred HHHhhhhEEEEEEEC--c-ccHHHHHHHHHHHHhhCCCCEEEEcch
Confidence 567777777777776 4 566666666666666667999999855
No 78
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=90.08 E-value=1.5 Score=45.04 Aligned_cols=102 Identities=13% Similarity=0.019 Sum_probs=65.6
Q ss_pred hhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccc--cccccCccCccchhhhhhh
Q 019498 109 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGRA 186 (340)
Q Consensus 109 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~--~~~~~~~~~~~~~~~~a~a 186 (340)
+++|.|+|+. +.-++++.++..-+. ..++++..++..++|+++++...+++. .+++. .+..+++-+..-
T Consensus 415 ~~~a~GlA~~----GG~~P~~~~~~~F~~---~~~~~ir~~a~~~~pvv~~~t~~g~g~G~dG~tH--q~~edla~lr~i 485 (673)
T 1r9j_A 415 CAILNGLDAH----DGIIPFGGTFLNFIG---YALGAVRLAAISHHRVIYVATHDSIGVGEDGPTH--QPVELVAALRAM 485 (673)
T ss_dssp HHHHHHHHHH----SSCEEEEEEEGGGGG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT--CCSSHHHHHHHS
T ss_pred HHHHHHHHhc----CCCEEEEEehHHHHH---HHHHHHHHHHhcCCCEEEEEECCccCcCCCCccc--CCHHHHHHHcCC
Confidence 4466676654 323556666543332 345678889999999999987777654 33433 233445444333
Q ss_pred cCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEE
Q 019498 187 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 224 (340)
Q Consensus 187 ~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~ 224 (340)
-|+.++.-- |+.++..+++.|++. .++|++|-.
T Consensus 486 P~l~V~~Pa--d~~e~~~~l~~a~~~---~~~Pv~i~~ 518 (673)
T 1r9j_A 486 PNLQVIRPS--DQTETSGAWAVALSS---IHTPTVLCL 518 (673)
T ss_dssp TTCEEECCS--SHHHHHHHHHHHHHC---TTCCEEEEC
T ss_pred CCCEEEeCC--CHHHHHHHHHHHHHh---CCCeEEEEE
Confidence 476666544 899999999998862 378998853
No 79
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=90.00 E-value=0.59 Score=46.62 Aligned_cols=109 Identities=13% Similarity=0.047 Sum_probs=69.1
Q ss_pred hhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccc---ccc---CccCccchhh
Q 019498 109 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIST---PIS---DQFRSDGAVV 182 (340)
Q Consensus 109 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~---~~~---~~~~~~~~~~ 182 (340)
.-+|.|.|.+. + ..++++..|=|+++ ..-++..|...++|+|+|.-+-...... ... ......+...
T Consensus 55 a~~A~Gyar~t---g-~~v~~~TsGpG~~N---~~~gia~A~~~~~Pll~itg~~~~~~~~~~~~~~~~~g~~~~q~~~~ 127 (563)
T 2vk8_A 55 AYAADGYARIK---G-MSCIITTFGVGELS---ALNGIAGSYAEHVGVLHVVGVPSISAQAKQLLLHHTLGNGDFTVFHR 127 (563)
T ss_dssp HHHHHHHHHHH---S-CEEEEEETTHHHHH---HHHHHHHHHHHTCCEEEEEEECCHHHHHTTCCCTTSCSSSCSSHHHH
T ss_pred HHHHHHHHHhh---C-CcEEEEcCCCcHHH---HHHHHHHHHhhCCCEEEEECCCChHHhhcccccccccCCcchHHHHH
Confidence 44677777654 3 34566666888875 4567888888999999998664322110 000 0001124567
Q ss_pred hhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEE
Q 019498 183 KGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 226 (340)
Q Consensus 183 ~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t 226 (340)
.++.+--....+. +++++...+.+|+..+...+||+.|++-.
T Consensus 128 ~~~~~~k~~~~v~--~~~~~~~~i~~A~~~A~~~~GPV~l~iP~ 169 (563)
T 2vk8_A 128 MSANISETTAMIT--DIATAPAEIDRCIRTTYVTQRPVYLGLPA 169 (563)
T ss_dssp HHHTTCSEEEECC--CTTTHHHHHHHHHHHHHHHTSCEEEEEET
T ss_pred HhhhhEEEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEEech
Confidence 7777777777776 66556666666666555567999998854
No 80
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=89.93 E-value=1.7 Score=40.19 Aligned_cols=99 Identities=15% Similarity=0.075 Sum_probs=61.2
Q ss_pred chhhHHHHHHHHhhhcCCCCeEEEE-ECCcccCcchHHHHHHH-HHh--------CCCCEEEEEEeCCccccccccCccC
Q 019498 107 TQLPHAVGAAYALKMDRKDACAVTY-FGDGGTSEGDFHAALNF-SAV--------TEAPVIFICRNNGWAISTPISDQFR 176 (340)
Q Consensus 107 ~~lp~A~G~A~a~k~~~~~~~vv~~-~GDG~~~~G~~~Eal~~-A~~--------~~Lpvi~vv~nN~~~~~~~~~~~~~ 176 (340)
..+++|.|+|++ + -++++++ +++.. + ..++.+.. ++. .++|+|+++. .++....... +.
T Consensus 62 ~~v~~a~G~A~~----G-~~p~~~~t~~~F~-~--~a~dqi~~~~a~~~~~~~g~~~~pvv~~~~-~g~~~~~g~~--hs 130 (324)
T 1umd_B 62 AIVGAALGMAAH----G-LRPVAEIQFADYI-F--PGFDQLVSQVAKLRYRSGGQFTAPLVVRMP-SGGGVRGGHH--HS 130 (324)
T ss_dssp HHHHHHHHHHHH----T-CEEEEECSSGGGC-G--GGHHHHHHTTTTHHHHTTTSSCCCCEEEEE-ECSSSSCGGG--SS
T ss_pred HHHHHHHHHHHC----C-CEEEEEeccHhHH-H--HHHHHHHHHHHHHHhhcCCCCcCCEEEEEc-CCCCCCCCCc--cc
Confidence 345677887776 2 3445544 78875 3 34555533 443 6889999887 3443322222 22
Q ss_pred ccchhhhhhhc-CceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEE
Q 019498 177 SDGAVVKGRAY-GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 223 (340)
Q Consensus 177 ~~~~~~~a~a~-G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe 223 (340)
..+. ...+++ |+.++.-. |+.+.+..++.|++ .++|++|-
T Consensus 131 ~~~~-a~~~~iP~~~V~~P~--d~~e~~~~l~~a~~----~~~Pv~i~ 171 (324)
T 1umd_B 131 QSPE-AHFVHTAGLKVVAVS--TPYDAKGLLKAAIR----DEDPVVFL 171 (324)
T ss_dssp CCCH-HHHHTSTTCEEEECC--SHHHHHHHHHHHHH----CSSCEEEE
T ss_pred hhHH-HHHhcCCCCEEEEeC--CHHHHHHHHHHHHh----cCCCEEEE
Confidence 2344 344443 77777666 99999999999985 57899884
No 81
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=89.40 E-value=1.3 Score=41.99 Aligned_cols=99 Identities=15% Similarity=-0.038 Sum_probs=55.7
Q ss_pred chhhHHHHHHHHhhhcCCCCeEEEE-ECCcccCcchHHHHHHH-HHhC--------CCCEEEEEEeCCccccccccCccC
Q 019498 107 TQLPHAVGAAYALKMDRKDACAVTY-FGDGGTSEGDFHAALNF-SAVT--------EAPVIFICRNNGWAISTPISDQFR 176 (340)
Q Consensus 107 ~~lp~A~G~A~a~k~~~~~~~vv~~-~GDG~~~~G~~~Eal~~-A~~~--------~Lpvi~vv~nN~~~~~~~~~~~~~ 176 (340)
..+++|.|+|++ + -++++.+ ++|... ..++.+.. ++.. ++|+++++.+-+..-..++ +.
T Consensus 109 ~~v~~a~G~A~~----G-~rpv~~~tf~~Fl~---~a~Dqi~~~~a~~~~~~~g~~~~pvv~~~~~gg~~g~g~~---hs 177 (369)
T 1ik6_A 109 GILGFAMGMAMA----G-LKPVAEIQFVDFIW---LGADELLNHIAKLRYRSGGNYKAPLVVRTPVGSGTRGGLY---HS 177 (369)
T ss_dssp HHHHHHHHHHHT----T-CEEEEECCCC-------CCHHHHHHHHHHHHC------CCCCEEEEEECC------------
T ss_pred HHHHHHHHHHHC----C-CeeEEEecchhHHH---HHHHHHHHHHHHHHHhhCCCCCCCEEEEEeCCCCCCCCcc---cc
Confidence 345667777765 2 3455544 888763 23444433 4433 9999999987663322221 12
Q ss_pred ccchhhhhhh-cCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEE
Q 019498 177 SDGAVVKGRA-YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 223 (340)
Q Consensus 177 ~~~~~~~a~a-~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe 223 (340)
..+ ....++ -|+.++.-. |+.+....++.|++ .++|++|-
T Consensus 178 ~~~-~a~l~~iPnl~V~~Ps--d~~e~~~ll~~A~~----~~~Pv~i~ 218 (369)
T 1ik6_A 178 NSP-EAIFVHTPGLVVVMPS--TPYNAKGLLKAAIR----GDDPVVFL 218 (369)
T ss_dssp --H-HHHHHTCTTCEEECCC--SHHHHHHHHHHHHH----SSSCEEEE
T ss_pred ccH-HHHHcCCCCcEEEecC--CHHHHHHHHHHHHh----CCCCEEEE
Confidence 222 234444 377777666 99999999999886 57899884
No 82
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=89.35 E-value=1.7 Score=44.75 Aligned_cols=102 Identities=17% Similarity=0.099 Sum_probs=64.8
Q ss_pred hhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCcc--ccccccCccCccchhhhhh
Q 019498 108 QLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWA--ISTPISDQFRSDGAVVKGR 185 (340)
Q Consensus 108 ~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~--~~~~~~~~~~~~~~~~~a~ 185 (340)
.+++|.|+|+. +.-++++..+.--+. ....++.+++..++||++++...+++ ...++.. +..+++-+..
T Consensus 439 mv~~A~GlA~~----gG~~P~~~tf~~Fs~---f~~~air~~al~~lpVv~v~~~~gigvG~dG~THq--~ied~a~lr~ 509 (690)
T 3m49_A 439 MGAAMNGIALH----GGLKTYGGTFFVFSD---YLRPAIRLAALMQLPVTYVFTHDSIAVGEDGPTHE--PIEQLAALRA 509 (690)
T ss_dssp HHHHHHHHHHH----SSCEEEEEEEGGGGG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCGGGC--CSSHHHHHHT
T ss_pred HHHHHHHHHHc----CCCEEEEEecHHHHH---HHHHHHHHHHhcCCCcEEEEECCCcCCCCCCCccC--CHHHHHHHhc
Confidence 35677777765 223455554322221 12345777889999999999988764 3444432 3345554433
Q ss_pred hcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEE
Q 019498 186 AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 223 (340)
Q Consensus 186 a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe 223 (340)
--|+.++.-- |+.++..+++.|++. .++|++|-
T Consensus 510 iPnl~V~~Pa--d~~E~~~~l~~Ai~~---~~~Pv~ir 542 (690)
T 3m49_A 510 MPNVSVIRPA--DGNESVAAWRLALES---TNKPTALV 542 (690)
T ss_dssp STTCEEECCS--SHHHHHHHHHHHHHC---SSSCEEEE
T ss_pred CCCCEEEeeC--CHHHHHHHHHHHHHc---CCCCEEEE
Confidence 3477766655 899999999999862 46899884
No 83
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=88.98 E-value=1.2 Score=41.20 Aligned_cols=99 Identities=12% Similarity=0.007 Sum_probs=60.0
Q ss_pred chhhHHHHHHHHhhhcCCCCeEEEE-ECCcccCcchHHHHHH-HHHh--------CCCCEEEEEEeCCccccccccCccC
Q 019498 107 TQLPHAVGAAYALKMDRKDACAVTY-FGDGGTSEGDFHAALN-FSAV--------TEAPVIFICRNNGWAISTPISDQFR 176 (340)
Q Consensus 107 ~~lp~A~G~A~a~k~~~~~~~vv~~-~GDG~~~~G~~~Eal~-~A~~--------~~Lpvi~vv~nN~~~~~~~~~~~~~ 176 (340)
..+++|.|+|++ + -++++++ ++++. + ..++.+. .++. .++|+|+++. .++...... .+.
T Consensus 61 ~~v~~a~G~A~~----G-~rp~~~~t~~~F~-~--~a~dqi~~~~a~~~~~~~g~~~~pvv~~~~-~g~~~~~g~--~hs 129 (324)
T 1w85_B 61 GIGGLAIGLALQ----G-FRPVPEIQFFGFV-Y--EVMDSICGQMARIRYRTGGRYHMPITIRSP-FGGGVHTPE--LHS 129 (324)
T ss_dssp HHHHHHHHHHHT----T-CEEEEBCSSGGGG-G--GTHHHHHTTGGGHHHHTTTSSCCCCEEEEE-ECSSSCCCT--TSS
T ss_pred HHHHHHHHHHhC----C-CEEEEEecchhHH-H--HHHHHHHHHHHHHhhhccCCCcCCEEEEEe-ccCCCCCCC--ccc
Confidence 445677777765 2 3444444 77776 2 3455554 2443 7899999886 344332221 122
Q ss_pred ccchhhhhhh-cCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEE
Q 019498 177 SDGAVVKGRA-YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 223 (340)
Q Consensus 177 ~~~~~~~a~a-~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe 223 (340)
..+. ...++ -|+.++.-. |+.+.+..++.|++ .++|++|-
T Consensus 130 ~~~~-a~~~~iP~l~V~~Ps--d~~e~~~~l~~a~~----~~~Pv~i~ 170 (324)
T 1w85_B 130 DSLE-GLVAQQPGLKVVIPS--TPYDAKGLLISAIR----DNDPVIFL 170 (324)
T ss_dssp CCCH-HHHTTSTTCEEECCS--SHHHHHHHHHHHHH----SSSCEEEE
T ss_pred ccHH-HHHccCCCCEEEeeC--CHHHHHHHHHHHHH----cCCCEEEE
Confidence 2334 33444 367666655 99999999999885 57899884
No 84
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=88.06 E-value=1.1 Score=44.56 Aligned_cols=109 Identities=17% Similarity=0.071 Sum_probs=67.9
Q ss_pred hhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCcccccc---cc---CccCccchh
Q 019498 108 QLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTP---IS---DQFRSDGAV 181 (340)
Q Consensus 108 ~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~---~~---~~~~~~~~~ 181 (340)
..-+|.|.|.+. + ..++++..|=|.++ ..-++..|...++|+|+|.-+-....... .. ......+..
T Consensus 55 A~~~A~Gyar~t---g-~~v~~~tsGpG~~N---~~~gv~~A~~~~~Pll~itg~~p~~~~~~~~~~~~~~g~~~~q~~~ 127 (552)
T 1ovm_A 55 ASYAADGYARCK---G-FAALLTTFGVGELS---AMNGIAGSYAEHVPVLHIVGAPGTAAQQRGELLHHTLGDGEFRHFY 127 (552)
T ss_dssp HHHHHHHHHHHH---S-CEEEEEETTHHHHH---THHHHHHHHHTTCCEEEEEEECCHHHHHHTCCCTTSCSSSCCSHHH
T ss_pred HHHHHHHHHHhh---C-CcEEEEccCCcHHH---HHHHHHHHhhhcCCEEEEECCCCHHHHhcccccccccCCCcHHHHH
Confidence 345677887764 3 33666677777764 45678888999999999986644322110 00 000112356
Q ss_pred hhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEE
Q 019498 182 VKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 226 (340)
Q Consensus 182 ~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t 226 (340)
..++.+--....+. + +++...+.+|+..+...+||+.|++-.
T Consensus 128 ~~~~~~tk~~~~v~--~-~~~~~~i~~A~~~a~~~~GPV~l~iP~ 169 (552)
T 1ovm_A 128 HMSEPITVAQAVLT--E-QNACYEIDRVLTTMLRERRPGYLMLPA 169 (552)
T ss_dssp HHTGGGCSEEEECC--T-TTHHHHHHHHHHHHHHHTCCEEEEEEH
T ss_pred HHHHhheeEEEEEc--c-ccHHHHHHHHHHHHHhCCCCEEEEeeh
Confidence 67777777777876 4 455555566655555556999998854
No 85
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=87.54 E-value=1.5 Score=41.05 Aligned_cols=101 Identities=8% Similarity=0.015 Sum_probs=61.1
Q ss_pred chhhHHHHHHHHhhhcCCCCeEEEE-ECCcccCcchHHHHHH-HHHhC--------CC-CEEEEEEeCCccccccccCcc
Q 019498 107 TQLPHAVGAAYALKMDRKDACAVTY-FGDGGTSEGDFHAALN-FSAVT--------EA-PVIFICRNNGWAISTPISDQF 175 (340)
Q Consensus 107 ~~lp~A~G~A~a~k~~~~~~~vv~~-~GDG~~~~G~~~Eal~-~A~~~--------~L-pvi~vv~nN~~~~~~~~~~~~ 175 (340)
..+++|.|+|++ + -++++++ ++++.. ..++.+. .++.+ ++ |+++++..-+. ...++. .
T Consensus 78 ~~v~~a~G~A~~----G-~rp~~~~tf~~F~~---~a~dqi~~~~a~~~~~~~g~~~~~pvv~~~~~~g~-~~G~th--~ 146 (342)
T 2bfd_B 78 GIVGFGIGIAVT----G-ATAIAEIQFADYIF---PAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCV-GHGALY--H 146 (342)
T ss_dssp HHHHHHHHHHHT----T-CCEEEECSSGGGCG---GGHHHHHTTGGGHHHHTTTSSCCTTEEEEEEESCC-SSCGGG--S
T ss_pred HHHHHHHHHHHC----C-CeeEEEecchhHHH---HHHHHHHHHHHHHHhhhcCCccCCCEEEEEecCCC-CCCcch--h
Confidence 345677777765 2 3445544 888854 3455553 44433 44 99999876442 233332 2
Q ss_pred CccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEE
Q 019498 176 RSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 224 (340)
Q Consensus 176 ~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~ 224 (340)
+..|++-+..--|+.++.-. |+.+.+..++.|++ .++|++|-.
T Consensus 147 ~~~d~~~l~~iP~l~V~~Ps--d~~e~~~~l~~a~~----~~~Pv~i~~ 189 (342)
T 2bfd_B 147 SQSPEAFFAHCPGIKVVIPR--SPFQAKGLLLSCIE----DKNPCIFFE 189 (342)
T ss_dssp SCCCHHHHHTSTTCEEECCS--SHHHHHHHHHHHHH----SSSCEEEEE
T ss_pred hHhHHHHHhcCCCcEEEeeC--CHHHHHHHHHHHHh----cCCcEEEEe
Confidence 23455433322377777655 99999999999886 378998843
No 86
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=86.61 E-value=3.8 Score=42.29 Aligned_cols=100 Identities=15% Similarity=0.068 Sum_probs=65.2
Q ss_pred hhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccc--cccccCccCccchhhhhhh
Q 019498 109 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGRA 186 (340)
Q Consensus 109 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~--~~~~~~~~~~~~~~~~a~a 186 (340)
+++|.|+|+. +.-++++.++. .|.+ .....+..++..++||+++....+++. .+++. .+..+++-+..-
T Consensus 461 v~~AaGlA~~----~G~~Pv~~~f~--~F~~-~~~~~ir~~a~~~lpv~~v~thdg~gvG~dG~TH--q~~ed~a~lr~i 531 (711)
T 3uk1_A 461 SAAINGLVLH----GGYKPFGGTFL--TFSD-YSRNALRVAALMKVPSIFVFTHDSIGLGEDGPTH--QSVEHVASLRLI 531 (711)
T ss_dssp HHHHHHHHHH----SSCEEEEEEEG--GGHH-HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT--CCSSHHHHHHTS
T ss_pred HHHHHHHHHc----CCCEEEEEEhH--HHHH-HHHHHHHHhhhcCCCEEEEEECCCcCcCCCCCcc--CChhHHHHHhcC
Confidence 5677787763 12345555543 3332 345667778889999999998777643 34443 233445444333
Q ss_pred cCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEE
Q 019498 187 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 223 (340)
Q Consensus 187 ~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe 223 (340)
-|+.++.-- |+.++..+++.|++ .++|++|-
T Consensus 532 Pnl~V~~Pa--d~~E~~~~l~~Ai~----~~~Pv~ir 562 (711)
T 3uk1_A 532 PNLDVWRPA--DTVETAVAWTYAVA----HQHPSCLI 562 (711)
T ss_dssp TTCEEECCS--SHHHHHHHHHHHHH----SSSCEEEE
T ss_pred CCCEEEecC--CHHHHHHHHHHHHh----cCCCEEEE
Confidence 477666655 89999999999886 57999884
No 87
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=84.88 E-value=4 Score=42.02 Aligned_cols=101 Identities=12% Similarity=0.071 Sum_probs=63.6
Q ss_pred hhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccc--cccccCccCccchhhhhhh
Q 019498 109 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGRA 186 (340)
Q Consensus 109 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~--~~~~~~~~~~~~~~~~a~a 186 (340)
+++|.|+|+. +.-++++..+.. |.. ....++.+++..++||+++....+++. ++++. .+..+++-+..-
T Consensus 445 v~~A~GlA~~----gG~~Pv~~tF~~--F~d-~~~~~ir~~al~~lpvv~v~thdg~gvG~dG~TH--q~ied~a~lr~i 515 (700)
T 3rim_A 445 GAILSGIVLH----GPTRAYGGTFLQ--FSD-YMRPAVRLAALMDIDTIYVWTHDSIGLGEDGPTH--QPIEHLSALRAI 515 (700)
T ss_dssp HHHHHHHHHH----SSCEEEEEEEGG--GGG-GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT--SCSSHHHHHHTS
T ss_pred HHHHHHHHHc----CCCEEEEEecHH--HHH-HHHHHHHHhcCCCCCEEEEEeCCCcccCCCCCcc--CChhHHHHHhcC
Confidence 4566777765 223445543322 211 123357788999999999998777653 34443 234455544444
Q ss_pred cCceEEEEcCCCHHHHHHHHHHHHHHhHccC--CCEEEE
Q 019498 187 YGVRSIRVDGNDALAIYSAVHAAREMAIGEG--RPILIE 223 (340)
Q Consensus 187 ~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~--~P~lIe 223 (340)
-|+.++.-- |+.++..+++.|++. .+ +|++|-
T Consensus 516 Pnl~V~~Pa--d~~e~~~~l~~Ai~~---~~~~~Pv~ir 549 (700)
T 3rim_A 516 PRLSVVRPA--DANETAYAWRTILAR---RNGSGPVGLI 549 (700)
T ss_dssp TTCEEECCS--SHHHHHHHHHHHHTT---TTCSSCEEEE
T ss_pred CCCEEEeCC--CHHHHHHHHHHHHHc---cCCCCCEEEE
Confidence 477766655 899999999998863 34 699885
No 88
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=84.52 E-value=2 Score=42.70 Aligned_cols=108 Identities=14% Similarity=0.012 Sum_probs=67.1
Q ss_pred hhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccccccCccCccchhhhhhhcC
Q 019498 109 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 188 (340)
Q Consensus 109 lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G 188 (340)
.-+|.|.|.+. +...+++|..|=|+++ ..-++..|..-+.|+|+|.-+-.........-| ..|....++.+-
T Consensus 59 a~~AdGyAr~t---G~pgv~~~TsGpG~~N---~~~gia~A~~d~vPll~itG~~~~~~~g~~~~Q--~~d~~~~~~~~t 130 (556)
T 3hww_A 59 GHLALGLAKVS---KQPVAVIVTSGTAVAN---LYPALIEAGLTGEKLILLTADRPPELIDCGANQ--AIRQPGMFASHP 130 (556)
T ss_dssp HHHHHHHHHHH---CSCEEEEECSSHHHHT---THHHHHHHHHHCCCEEEEEEECCGGGSSSSCTT--CCCCTTTTTTCS
T ss_pred HHHHHHHHHhh---CCCEEEEECCCcHHHh---hhHHHHHHHHhCCCeEEEeCCCCHHHhccCCCc--cccHHHHHhhhe
Confidence 34566776553 4456677777888886 456788889999999999865443221111111 234555666665
Q ss_pred ceEEEEc-CC---CHHHHHHHHHHHHHHhHccCCCEEEEEEE
Q 019498 189 VRSIRVD-GN---DALAIYSAVHAAREMAIGEGRPILIEALT 226 (340)
Q Consensus 189 ~~~~~Vd-G~---d~~~v~~a~~~a~~~~r~~~~P~lIe~~t 226 (340)
-....+. .. .+..+.+++.+|+.. ...||+.|++-.
T Consensus 131 k~~~~v~~~~~~~~~~~i~~~i~~A~~~--~r~GPV~i~iP~ 170 (556)
T 3hww_A 131 THSISLPRPTQDIPARWLVSTIDHALGT--LHAGGVHINCPF 170 (556)
T ss_dssp SEEEECCCCCTTSCHHHHHHHHHHHHHS--CCSSCEEEEEEC
T ss_pred eEEEecCCCcccccHHHHHHHHHHHHhc--CCCCCEEEeCCc
Confidence 5556664 21 134588888888731 235899999864
No 89
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=84.44 E-value=4.1 Score=44.70 Aligned_cols=113 Identities=16% Similarity=0.070 Sum_probs=71.9
Q ss_pred hhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccccccCccCccchhhhhhhc
Q 019498 108 QLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAY 187 (340)
Q Consensus 108 ~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~ 187 (340)
.+++++|++++ +.++++.+--.+++ ...|.|..++-..+|+|+++-+-...-.. ..-.....|+. .++..
T Consensus 66 A~~aaiGAa~a------GaR~~t~Ts~~Gl~--lm~e~l~~~ag~~~P~Vi~va~R~g~~~g-lsi~~~hsd~~-~ar~~ 135 (1231)
T 2c42_A 66 AAGAVHGALAA------GALTTTFTASQGLL--LMIPNMYKISGELLPGVFHVTARAIAAHA-LSIFGDHQDIY-AARQT 135 (1231)
T ss_dssp HHHHHHHHHHT------TCCEEEEECHHHHH--HHHHHHHHHHHTTCCCEEEEEECCCCSSS-BCCSCCSHHHH-TTTTS
T ss_pred HHHHHHHHHHc------CChHhhhccHHHHH--HHHHHHHHHhCCCCCEEEEECCCCccCCC-CcCCCchhhHH-HHhcC
Confidence 35678888775 34556665444554 35677765555678998888776542111 00000111221 25567
Q ss_pred CceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEecCCCCC
Q 019498 188 GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHT 233 (340)
Q Consensus 188 G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~~gHs 233 (340)
||+++.-. ++.+.+.-+..|.+.+.+..-|+++-...+|. +|.
T Consensus 136 G~~vl~ps--s~QEa~dl~~~Af~lAek~~~PVi~~~Dg~~~-sh~ 178 (1231)
T 2c42_A 136 GFAMLASS--SVQEAHDMALVAHLAAIESNVPFMHFFDGFRT-SHE 178 (1231)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHHHHHHHCCCEEEEEETTTT-TTC
T ss_pred CcEEEECC--CHHHHHHHHHHHHHHHHHcCCCEEEEecCccc-ccc
Confidence 88777655 89999998888877777788999988888765 454
No 90
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=78.52 E-value=8.8 Score=32.33 Aligned_cols=71 Identities=17% Similarity=0.085 Sum_probs=44.2
Q ss_pred CCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCcccccccc------------C---ccCccchhhhhhhcCc
Q 019498 125 DACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPIS------------D---QFRSDGAVVKGRAYGV 189 (340)
Q Consensus 125 ~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~------------~---~~~~~~~~~~a~a~G~ 189 (340)
...+|+++.||.-+.+...+.+..+...+++|..|-.-+.-+...+.. . ......+..+|+.-|.
T Consensus 111 ~~~~ivllTDG~~~~~~~~~~~~~~~~~~i~v~~igig~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~L~~iA~~~gG 190 (218)
T 3ibs_A 111 VGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTNDYRRDREGNVIVTRLNEGMCQEIAKDGKG 190 (218)
T ss_dssp CCEEEEEEECCTTCCSCHHHHHHHHHTTTEEEEEEEESCTTCEECBCTTSSCBCBCTTSCBCEECCCHHHHHHHHHHTEE
T ss_pred CCcEEEEEcCCCCCCCcHHHHHHHHHhcCCEEEEEEecCCCCCcccccCCCceeEcCCCCEeEecCCHHHHHHHHHhcCC
Confidence 457999999999987767787888887777776554433111000000 0 1112236677888888
Q ss_pred eEEEEc
Q 019498 190 RSIRVD 195 (340)
Q Consensus 190 ~~~~Vd 195 (340)
.++.++
T Consensus 191 ~~~~~~ 196 (218)
T 3ibs_A 191 IYVRVD 196 (218)
T ss_dssp EEEEEC
T ss_pred EEEECC
Confidence 888876
No 91
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=71.16 E-value=10 Score=40.26 Aligned_cols=105 Identities=14% Similarity=0.181 Sum_probs=56.2
Q ss_pred chhhHHHHHHHHhhhcCCCCeEEE--EECCcccCcc--hHHHHHH-HH-Hh--CCCCEEEEEEeCCccccccccCccCcc
Q 019498 107 TQLPHAVGAAYALKMDRKDACAVT--YFGDGGTSEG--DFHAALN-FS-AV--TEAPVIFICRNNGWAISTPISDQFRSD 178 (340)
Q Consensus 107 ~~lp~A~G~A~a~k~~~~~~~vv~--~~GDG~~~~G--~~~Eal~-~A-~~--~~Lpvi~vv~nN~~~~~~~~~~~~~~~ 178 (340)
..++.|.|+|++ +++..+|+ .+|| |..| ..+.-+. .+ +. .++||++++.. +|...++...+....
T Consensus 663 ~~vg~a~G~A~~----G~~~lpv~e~qf~d--F~~~AQra~DQii~~~~ak~~~~~~vv~~l~~-G~~g~G~~Hss~~~E 735 (933)
T 2jgd_A 663 AVLAFEYGYATA----EPRTLTIWEAQFGD--FANGAQVVIDQFISSGEQKWGRMCGLVMLLPH-GYEGQGPEHSSARLE 735 (933)
T ss_dssp HHHHHHHHHHHH----CTTSEEEEEC-CGG--GGGGGHHHHHHTTTTHHHHHCCCCCCEEEEEC-CCSSSCTTSSCCCHH
T ss_pred HHHHHHHHHHhc----CCCCCCEEEEEEhh--hhcccHHHHHHHHHHHHHHHccCCCEEEEEeC-CCCCCCcccccchHH
Confidence 345566666665 45433443 5655 3333 2333332 33 33 37799999886 554334433222222
Q ss_pred chhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEE
Q 019498 179 GAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILI 222 (340)
Q Consensus 179 ~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lI 222 (340)
++.....--|+.++... |+.+....++.++. +..++|++|
T Consensus 736 ~~l~~~~~pnm~V~~Ps--t~~e~~~lLr~a~~--~~~~~Pvii 775 (933)
T 2jgd_A 736 RYLQLCAEQNMQVCVPS--TPAQVYHMLRRQAL--RGMRRPLVV 775 (933)
T ss_dssp HHHHTCCTTCCEEECCC--SHHHHHHHHHHHHH--SSCCCCEEE
T ss_pred HHHHHhCCCCeEEEecC--CHHHHHHHHHHHHH--hcCCCcEEE
Confidence 33332222366655544 99999999988742 234789988
No 92
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=68.94 E-value=15 Score=38.63 Aligned_cols=107 Identities=11% Similarity=0.045 Sum_probs=58.4
Q ss_pred chhhHHHHHHHHhhhcCCCCeEEEEECCcccCcch--HHHHHHHHHh--C--CCCEEEEEEeCCccccccccCccCccch
Q 019498 107 TQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGD--FHAALNFSAV--T--EAPVIFICRNNGWAISTPISDQFRSDGA 180 (340)
Q Consensus 107 ~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~--~~Eal~~A~~--~--~Lpvi~vv~nN~~~~~~~~~~~~~~~~~ 180 (340)
..++.|+|+|++ +++.+++.-.-=|.|..+. .+.-+...+. | ++||++++..-+.+ .++...+....++
T Consensus 595 ~~vG~a~G~A~~----G~~~~~i~eaqf~dF~~~AQ~~~DQ~i~~~~~k~~~~~~vvi~~p~G~~G-~Gp~Hs~~~~E~~ 669 (868)
T 2yic_A 595 AAVGFEYGYSVG----NPDAMVLWEAQFGDFVNGAQSIIDEFISSGEAKWGQLSDVVLLLPHGHEG-QGPDHTSGRIERF 669 (868)
T ss_dssp HHHHHHHHHHHH----CTTSEEEEECSSGGGGGGGHHHHHHTTTTHHHHHCCCCCCEEEEECCCSS-SCTTSSCCCHHHH
T ss_pred HHHHHHHHHHcc----CCCCceEEEEehHHHHhhHHHHHHHHHHHHHHHhCCCCCEEEEecCCCCC-CChhhcCCcHHHH
Confidence 345566666665 4555555444444554433 1222222222 2 67999988854433 3343332223344
Q ss_pred hhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEE
Q 019498 181 VVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILI 222 (340)
Q Consensus 181 ~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lI 222 (340)
.....--|+.++... |+.+....++.++.. ..++|++|
T Consensus 670 l~l~~~pnm~V~~Ps--~p~~~~~lLr~a~~~--~~~~Pvii 707 (868)
T 2yic_A 670 LQLWAEGSMTIAMPS--TPANYFHLLRRHGKD--GIQRPLIV 707 (868)
T ss_dssp HHHCCTTSCEEECCC--SHHHHHHHHHHHHHS--SCCCCEEE
T ss_pred HhcCCCCCCEEEEeC--CHHHHHHHHHHHHhc--CCCCcEEE
Confidence 443333466666555 999999999887642 23589876
No 93
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=66.15 E-value=24 Score=22.76 Aligned_cols=26 Identities=8% Similarity=0.115 Sum_probs=14.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHh
Q 019498 270 WNGDIESELRSSVRKQILHALQEAEK 295 (340)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~a~~~a~~ 295 (340)
.+..+++.+++++.+++...++++++
T Consensus 4 ~~~~dle~~KqEIL~E~RkElqK~K~ 29 (45)
T 1use_A 4 SDYSDLQRVKQELLEEVKKELQKVKE 29 (45)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555555555544
No 94
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=63.40 E-value=22 Score=38.53 Aligned_cols=107 Identities=10% Similarity=0.049 Sum_probs=58.6
Q ss_pred chhhHHHHHHHHhhhcCCCCeEEEEECCcccCcch---HHHHHHHH---HhCCCCEEEEEEeCCccccccccCccCccch
Q 019498 107 TQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGD---FHAALNFS---AVTEAPVIFICRNNGWAISTPISDQFRSDGA 180 (340)
Q Consensus 107 ~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~---~~Eal~~A---~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~ 180 (340)
..++.|+|+|++ +++-+++.-.-=|.|..+. +-+=++.+ ...++||++.+..-+.+ .++...+....++
T Consensus 840 ~~vg~a~G~A~~----G~~~~~i~Eaqf~dF~~~aQ~~~DQ~i~~~~~k~~~~~~vv~~lp~G~~G-~G~~Hs~~~~E~~ 914 (1113)
T 2xt6_A 840 AAVGFEYGYSVG----NPDAMVLWEAQFGDFVNGAQSIIDEFISSGEAKWGQLSDVVLLLPHGHEG-QGPDHTSGRIERF 914 (1113)
T ss_dssp HHHHHHHHHHHH----CTTSEEEEECSSGGGGGGGHHHHHHTTTTHHHHHCCCCCCEEEEECCCSS-SCTTSSCCCHHHH
T ss_pred HHHHHHHHHHhc----CCCCceEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCCC-CChhhhcccHHHH
Confidence 345566666665 5555555544444554443 22212222 12267999998854433 3443333222334
Q ss_pred hhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEE
Q 019498 181 VVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILI 222 (340)
Q Consensus 181 ~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lI 222 (340)
.....--|+.++... |+.+....++.++.+ ..++|++|
T Consensus 915 l~l~~~pnm~V~~Ps--~~~~~~~lLr~a~~~--~~~~Pvii 952 (1113)
T 2xt6_A 915 LQLWAEGSMTIAMPS--TPANYFHLLRRHGKD--GIQRPLIV 952 (1113)
T ss_dssp HHHCCTTSCEEECCS--SHHHHHHHHHHHHHS--SCCCCEEE
T ss_pred HhcCCCCCcEEEecC--CHHHHHHHHHHHHhc--cCCCCEEE
Confidence 433333466666555 999999999887752 23589877
No 95
>2zzd_B Thiocyanate hydrolase subunit beta; scnase, cobalt, metalloprotein, sulfenic acid, sulfinic acid, nitrIle hydratase, carbonyl sulfide; HET: FRU TLA BGC; 1.78A {Thiobacillus thioparus} PDB: 2dd4_B 2dxb_B 2dd5_B* 2dxc_B*
Probab=59.74 E-value=13 Score=30.66 Aligned_cols=31 Identities=3% Similarity=-0.047 Sum_probs=27.3
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q 019498 258 TRFRKWIESNGWWNGDIESELRSSVRKQILH 288 (340)
Q Consensus 258 ~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 288 (340)
.-+.+.|+++|++|.+||++..++++++...
T Consensus 114 ~ALe~lLvekGvit~~EL~ar~aEv~ar~~~ 144 (157)
T 2zzd_B 114 LTAARILVDKQFVTLTELHNKIVEMRERVAS 144 (157)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHhhhc
Confidence 5689999999999999999999998887654
No 96
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=55.62 E-value=15 Score=28.91 Aligned_cols=36 Identities=22% Similarity=0.200 Sum_probs=30.0
Q ss_pred hhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCE
Q 019498 185 RAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPI 220 (340)
Q Consensus 185 ~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~ 220 (340)
.+.|+-.++..|.|.+++.+|+++.+..+|+.-|.+
T Consensus 80 sgsgvm~i~f~gddlea~ekalkemirqarkfagtv 115 (170)
T 4hhu_A 80 SGSGVMVIVFEGDDLEALEKALKEMIRQARKFAGTV 115 (170)
T ss_dssp TTCCEEEEEEECSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred CCceEEEEEEecCcHHHHHHHHHHHHHHHHhhcceE
Confidence 445677788899999999999999999999876643
No 97
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=47.91 E-value=25 Score=27.53 Aligned_cols=33 Identities=24% Similarity=0.234 Sum_probs=28.2
Q ss_pred CceEEEEcCCCHHHHHHHHHHHHHHhHccCCCE
Q 019498 188 GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPI 220 (340)
Q Consensus 188 G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~ 220 (340)
|+-.++..|.|.+++.+|+++.+..+|+.-|.+
T Consensus 2 gvm~i~f~gddlea~ekalkemirqarkfagtv 34 (170)
T 4hhu_A 2 GVMVIVFEGDDLEALEKALKEMIRQARKFAGTV 34 (170)
T ss_dssp CEEEEEEECSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred ceEEEEEecCcHHHHHHHHHHHHHHHHhhcceE
Confidence 566778889999999999999999999876654
No 98
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=45.74 E-value=45 Score=29.93 Aligned_cols=34 Identities=21% Similarity=0.290 Sum_probs=27.9
Q ss_pred EEEECCccc--CcchHHHHHHHHHhCCCCEEEEEEeC
Q 019498 129 VTYFGDGGT--SEGDFHAALNFSAVTEAPVIFICRNN 163 (340)
Q Consensus 129 v~~~GDG~~--~~G~~~Eal~~A~~~~Lpvi~vv~nN 163 (340)
|+|--||+. ..|.++-+|.+|..++ .+.|+|.+.
T Consensus 3 i~ir~Da~~~IG~GHvmRcl~LA~~l~-~v~F~~~~~ 38 (282)
T 3hbm_A 3 VLFRSDSSSQIGFGHIKRDLVLAKQYS-DVSFACLPL 38 (282)
T ss_dssp EEEEECCBTTTBSHHHHHHHHHHTTCS-SEEEEECCC
T ss_pred EEEEEecCCCccccHHHHHHHHHHHHH-hCEEEEecC
Confidence 566778876 5888999999999998 999998653
No 99
>1abz_A Alpha-T-alpha, ATA; de novo design, helix-turn-helix, peptide; HET: SIN; NMR {} SCOP: k.15.1.1
Probab=41.75 E-value=23 Score=21.31 Aligned_cols=27 Identities=11% Similarity=0.117 Sum_probs=23.0
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHH
Q 019498 261 RKWIESNGWWNGDIESELRSSVRKQIL 287 (340)
Q Consensus 261 ~~~L~~~g~~~~~~~~~~~~~~~~~~~ 287 (340)
-+.|.++|.-+..|+.++++..+++|+
T Consensus 12 lqaleargtdsnaelrameaklkaeiq 38 (40)
T 1abz_A 12 LQALEARGTDSNAELRAMEAKLKAEIQ 38 (40)
T ss_dssp HHHHHHTCSSCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCchHHHHHHHHHHHHHHh
Confidence 345778999999999999999999875
No 100
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A
Probab=39.77 E-value=61 Score=26.79 Aligned_cols=49 Identities=12% Similarity=-0.004 Sum_probs=34.9
Q ss_pred cchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEE
Q 019498 178 DGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 226 (340)
Q Consensus 178 ~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t 226 (340)
..+.+.++.+|+.+....--+..++.+.+++..+.........++.+..
T Consensus 61 ~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~~~~~~dh~~~dc~vv~il 109 (167)
T 1pyo_A 61 STLVTLFKLLGYDVHVLCDQTAQEMQEKLQNFAQLPAHRVTDSCIVALL 109 (167)
T ss_dssp HHHHHHHHHTTEEEEEEESCCHHHHHHHHHHHHTCGGGGTSSEEEEEEE
T ss_pred HHHHHHHHHCCCEEEEeeCCCHHHHHHHHHHhhhhhhccCCCEEEEEeC
Confidence 4578889999999988887788999999887654111234566665544
No 101
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=38.59 E-value=39 Score=23.94 Aligned_cols=24 Identities=17% Similarity=0.331 Sum_probs=19.1
Q ss_pred CChHHHHHHHHHHCCCCCHHHHHHH
Q 019498 254 QDPVTRFRKWIESNGWWNGDIESEL 278 (340)
Q Consensus 254 ~dpi~~~~~~L~~~g~~~~~~~~~~ 278 (340)
.-|+..=.++|..+| +|++||++.
T Consensus 32 ~sp~~~K~~FL~sKG-Lt~eEI~~A 55 (70)
T 2w84_A 32 QSPLATRRAFLKKKG-LTDEEIDMA 55 (70)
T ss_dssp GSCHHHHHHHHHHTT-CCHHHHHHH
T ss_pred hCCHHHHHHHHHHcC-CCHHHHHHH
Confidence 368888899999999 588888643
No 102
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=37.26 E-value=42 Score=23.33 Aligned_cols=29 Identities=24% Similarity=0.204 Sum_probs=24.1
Q ss_pred EEEcCCCHHHHHHHHHHHHHHhHccCCCE
Q 019498 192 IRVDGNDALAIYSAVHAAREMAIGEGRPI 220 (340)
Q Consensus 192 ~~VdG~d~~~v~~a~~~a~~~~r~~~~P~ 220 (340)
++..|.|.++..+|+++.+..+|+..|.+
T Consensus 5 irfrgddleafekalkemirqarkfagtv 33 (85)
T 2kl8_A 5 IRFRGDDLEAFEKALKEMIRQARKFAGTV 33 (85)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHTTTTCEE
T ss_pred eeecCCcHHHHHHHHHHHHHHHHhhcceE
Confidence 45568899999999999999998877643
No 103
>3ff5_A PEX14P, peroxisomal biogenesis factor 14; protein import, peroxin, 3 helices bundle, protein transport; HET: DPW; 1.80A {Rattus norvegicus}
Probab=36.48 E-value=44 Score=22.41 Aligned_cols=25 Identities=16% Similarity=0.264 Sum_probs=20.3
Q ss_pred CChHHHHHHHHHHCCCCCHHHHHHHH
Q 019498 254 QDPVTRFRKWIESNGWWNGDIESELR 279 (340)
Q Consensus 254 ~dpi~~~~~~L~~~g~~~~~~~~~~~ 279 (340)
.-|+..=.++|..+| +|++||++.-
T Consensus 27 ~sp~~~K~~FL~sKG-Lt~~EI~~Al 51 (54)
T 3ff5_A 27 QSPLATRRAFLKKKG-LTDEEIDLAF 51 (54)
T ss_dssp GSCHHHHHHHHHHTT-CCHHHHHHHH
T ss_pred cCCHHHHHHHHHHcC-CCHHHHHHHH
Confidence 468888889999999 6999987654
No 104
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=36.12 E-value=72 Score=25.88 Aligned_cols=35 Identities=11% Similarity=0.020 Sum_probs=16.6
Q ss_pred CCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEE
Q 019498 125 DACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICR 161 (340)
Q Consensus 125 ~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~ 161 (340)
+..+|++..-|... .+.+++..|...+.++|.|..
T Consensus 80 ~d~vI~iS~sG~t~--~~~~~~~~ak~~g~~vi~IT~ 114 (186)
T 1m3s_A 80 GDLVIIGSGSGETK--SLIHTAAKAKSLHGIVAALTI 114 (186)
T ss_dssp TCEEEEECSSSCCH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEEcCCCCcH--HHHHHHHHHHHCCCEEEEEEC
Confidence 34445554444443 344445555555555544443
No 105
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=36.08 E-value=96 Score=24.94 Aligned_cols=38 Identities=18% Similarity=0.176 Sum_probs=25.7
Q ss_pred CCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEe
Q 019498 123 RKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRN 162 (340)
Q Consensus 123 ~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~n 162 (340)
+++..++++.--|... .+.+++..|...+.++|.|..|
T Consensus 81 ~~~d~vi~iS~sG~t~--~~~~~~~~ak~~g~~vi~IT~~ 118 (180)
T 1jeo_A 81 EKDDLLILISGSGRTE--SVLTVAKKAKNINNNIIAIVCE 118 (180)
T ss_dssp CTTCEEEEEESSSCCH--HHHHHHHHHHTTCSCEEEEESS
T ss_pred CCCCEEEEEeCCCCcH--HHHHHHHHHHHCCCcEEEEeCC
Confidence 3456677777777765 4667777777777777766654
No 106
>2e62_A Protein AT5G25060; CWF21 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Arabidopsis thaliana}
Probab=35.03 E-value=67 Score=22.04 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=27.7
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
Q 019498 257 VTRFRKWIESNGWWNGDIESELRSSVRKQILHA 289 (340)
Q Consensus 257 i~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~a 289 (340)
+..|++.|.+.|..+.++|+.--++.++.+.+.
T Consensus 25 ~me~rD~LEeqG~~~~~eI~~kV~~~RkkL~~~ 57 (61)
T 2e62_A 25 LIEYRETLEEQGMKNPEEIERKVEINRKRLEVD 57 (61)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHh
Confidence 466999999999999899988888888877643
No 107
>3c5c_A RAS-like protein 12; GDP, GTPase, structural genomics consortium, SGC, limited proteolysis, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.85A {Homo sapiens}
Probab=34.90 E-value=1.5e+02 Score=23.75 Aligned_cols=58 Identities=16% Similarity=0.147 Sum_probs=34.5
Q ss_pred CCCCEEEEEEeCCccccccccCccCccchhhhhhhcCceEEEEcC-CCHHHHHHHHHHHHHHh
Q 019498 152 TEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDG-NDALAIYSAVHAAREMA 213 (340)
Q Consensus 152 ~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG-~d~~~v~~a~~~a~~~~ 213 (340)
.+.|+++|.+--.. ...+........+.++.+|++.+.+.. .+-..+.+.+....+.+
T Consensus 126 ~~~piilv~nK~Dl----~~~~~v~~~~~~~~~~~~~~~~~e~Sa~~~g~gv~~lf~~l~~~i 184 (187)
T 3c5c_A 126 RSIPALLLGNKLDM----AQYRQVTKAEGVALAGRFGCLFFEVSACLDFEHVQHVFHEAVREA 184 (187)
T ss_dssp CCCCEEEEEECGGG----GGGCSSCHHHHHHHHHHHTCEEEECCSSSCSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECcch----hhcCccCHHHHHHHHHHcCCcEEEEeecCccccHHHHHHHHHHHH
Confidence 36787776643222 111122223455677788999999887 66666666666665544
No 108
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=33.40 E-value=99 Score=24.90 Aligned_cols=17 Identities=18% Similarity=0.131 Sum_probs=8.6
Q ss_pred hhhhhhhcCceEEEEcC
Q 019498 180 AVVKGRAYGVRSIRVDG 196 (340)
Q Consensus 180 ~~~~a~a~G~~~~~VdG 196 (340)
..+.++.-|++++-+.+
T Consensus 115 ~~~~ak~~g~~vi~IT~ 131 (183)
T 2xhz_A 115 LIPVLKRLHVPLICITG 131 (183)
T ss_dssp HHHHHHTTTCCEEEEES
T ss_pred HHHHHHHCCCCEEEEEC
Confidence 44445555555555543
No 109
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=32.13 E-value=86 Score=26.57 Aligned_cols=18 Identities=17% Similarity=0.226 Sum_probs=10.3
Q ss_pred chhhhhhh--cCceEEEEcC
Q 019498 179 GAVVKGRA--YGVRSIRVDG 196 (340)
Q Consensus 179 ~~~~~a~a--~G~~~~~VdG 196 (340)
+..+.++. .|++++-+.+
T Consensus 124 ~~~~~ak~~~~Ga~vI~IT~ 143 (220)
T 3etn_A 124 ELTQLAHNLNPGLKFIVITG 143 (220)
T ss_dssp HHHHHHHHHCTTCEEEEEES
T ss_pred HHHHHHHhcCCCCeEEEEEC
Confidence 34555666 6666666543
No 110
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=31.82 E-value=61 Score=27.74 Aligned_cols=82 Identities=13% Similarity=0.067 Sum_probs=45.9
Q ss_pred CeEEEEECCcccCcchHHHHHHHHHhCCC--CEEEEEEeCCccccccccCccCccchhhhhhhcCceEEEEcCC---CHH
Q 019498 126 ACAVTYFGDGGTSEGDFHAALNFSAVTEA--PVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN---DAL 200 (340)
Q Consensus 126 ~~vv~~~GDG~~~~G~~~Eal~~A~~~~L--pvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~---d~~ 200 (340)
+++|.+.|-|++.+ ...+++ ...++ .|+.|+.|+. .....++|+.+|+|+..++-. +.+
T Consensus 5 ki~vl~sG~g~~~~-~~l~~l---~~~~l~~~I~~Vit~~~------------~~~v~~~A~~~gIp~~~~~~~~~~~~~ 68 (212)
T 3av3_A 5 RLAVFASGSGTNFQ-AIVDAA---KRGDLPARVALLVCDRP------------GAKVIERAARENVPAFVFSPKDYPSKA 68 (212)
T ss_dssp EEEEECCSSCHHHH-HHHHHH---HTTCCCEEEEEEEESST------------TCHHHHHHHHTTCCEEECCGGGSSSHH
T ss_pred EEEEEEECCcHHHH-HHHHHH---HhCCCCCeEEEEEeCCC------------CcHHHHHHHHcCCCEEEeCcccccchh
Confidence 57788889887643 122222 23333 5666776542 113567899999999976532 333
Q ss_pred HHHHHHHHHHHHhHccCCCEEEEEEEe
Q 019498 201 AIYSAVHAAREMAIGEGRPILIEALTY 227 (340)
Q Consensus 201 ~v~~a~~~a~~~~r~~~~P~lIe~~t~ 227 (340)
+..+.+.+.++ .-+|=+|.+.-|
T Consensus 69 ~~~~~~~~~l~----~~~~Dliv~a~y 91 (212)
T 3av3_A 69 AFESEILRELK----GRQIDWIALAGY 91 (212)
T ss_dssp HHHHHHHHHHH----HTTCCEEEESSC
T ss_pred hhHHHHHHHHH----hcCCCEEEEchh
Confidence 33334433333 235666666554
No 111
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=31.61 E-value=1.1e+02 Score=24.79 Aligned_cols=79 Identities=10% Similarity=0.061 Sum_probs=42.1
Q ss_pred ccchhhHHHHHHHHhhhcCCCCeEEEEECCcccCcchHHHHHHHHHhCCC-CEEEEEEeCCccccccccCccCccchhhh
Q 019498 105 IATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEA-PVIFICRNNGWAISTPISDQFRSDGAVVK 183 (340)
Q Consensus 105 lG~~lp~A~G~A~a~k~~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~L-pvi~vv~nN~~~~~~~~~~~~~~~~~~~~ 183 (340)
+|.|-+..++..++.++..-+..+.++.+|+... .+ .+...+- .+++++...++.. ...+..+.
T Consensus 45 ~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~----~~---~~~~~~~~d~~i~iS~sG~t~--------~~~~~~~~ 109 (187)
T 3sho_A 45 VGMGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTL----TI---TLANLRPTDLMIGVSVWRYLR--------DTVAALAG 109 (187)
T ss_dssp ECCGGGHHHHHHHHHHHHHTTCCEEEECCCTHHH----HH---HHHTCCTTEEEEEECCSSCCH--------HHHHHHHH
T ss_pred EecCchHHHHHHHHHHHHhcCCCEEEecCCchhH----HH---HHhcCCCCCEEEEEeCCCCCH--------HHHHHHHH
Confidence 4455555566666666655555666666454331 21 2223333 3555554433221 12346678
Q ss_pred hhhcCceEEEEcCCC
Q 019498 184 GRAYGVRSIRVDGND 198 (340)
Q Consensus 184 a~a~G~~~~~VdG~d 198 (340)
++.-|++++-+.++.
T Consensus 110 ak~~g~~vi~IT~~~ 124 (187)
T 3sho_A 110 AAERGVPTMALTDSS 124 (187)
T ss_dssp HHHTTCCEEEEESCT
T ss_pred HHHCCCCEEEEeCCC
Confidence 888899988887543
No 112
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=30.85 E-value=48 Score=28.51 Aligned_cols=82 Identities=21% Similarity=0.229 Sum_probs=46.1
Q ss_pred CCeEEEEECCcccCcchHHHHHHHHHhC-CCC--EEEEEEeCCccccccccCccCccchhhhhhhcCceEEEEcCC---C
Q 019498 125 DACAVTYFGDGGTSEGDFHAALNFSAVT-EAP--VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN---D 198 (340)
Q Consensus 125 ~~~vv~~~GDG~~~~G~~~Eal~~A~~~-~Lp--vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~---d 198 (340)
.+++|.+.|.|+.. +++--+... ++| |+.|+.|+.- ..-.++|+.+|+|+..++-. +
T Consensus 8 ~ri~vl~SG~gsnl-----~all~~~~~~~l~~~I~~Visn~~~------------a~~l~~A~~~gIp~~~~~~~~~~~ 70 (209)
T 4ds3_A 8 NRVVIFISGGGSNM-----EALIRAAQAPGFPAEIVAVFSDKAE------------AGGLAKAEAAGIATQVFKRKDFAS 70 (209)
T ss_dssp EEEEEEESSCCHHH-----HHHHHHHTSTTCSEEEEEEEESCTT------------CTHHHHHHHTTCCEEECCGGGSSS
T ss_pred ccEEEEEECCcHHH-----HHHHHHHHcCCCCcEEEEEEECCcc------------cHHHHHHHHcCCCEEEeCccccCC
Confidence 46788888887764 444444443 354 6777766421 01246899999999987632 3
Q ss_pred HHHHHHHHHHHHHHhHccCCCEEEEEEEe
Q 019498 199 ALAIYSAVHAAREMAIGEGRPILIEALTY 227 (340)
Q Consensus 199 ~~~v~~a~~~a~~~~r~~~~P~lIe~~t~ 227 (340)
.++..+.+.+.++ + -+|=+|.+.-|
T Consensus 71 r~~~d~~~~~~l~---~-~~~Dliv~agy 95 (209)
T 4ds3_A 71 KEAHEDAILAALD---V-LKPDIICLAGY 95 (209)
T ss_dssp HHHHHHHHHHHHH---H-HCCSEEEESSC
T ss_pred HHHHHHHHHHHHH---h-cCCCEEEEecc
Confidence 3334444444443 2 24555555443
No 113
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=30.42 E-value=60 Score=28.00 Aligned_cols=56 Identities=23% Similarity=0.275 Sum_probs=34.7
Q ss_pred CCCeEEEEECCcccCcchHHHHHHHHHhC-CC--CEEEEEEeCCccccccccCccCccchhhhhhhcCceEEEEcC
Q 019498 124 KDACAVTYFGDGGTSEGDFHAALNFSAVT-EA--PVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDG 196 (340)
Q Consensus 124 ~~~~vv~~~GDG~~~~G~~~Eal~~A~~~-~L--pvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG 196 (340)
+.+++|.+.|.|+.. +++--+... ++ .|+.|+.|+.-+ .-.++|+.+|+|+..++-
T Consensus 8 ~~ri~vl~SG~gsnl-----~all~~~~~~~~~~~I~~Vis~~~~a------------~~l~~A~~~gIp~~~~~~ 66 (215)
T 3kcq_A 8 ELRVGVLISGRGSNL-----EALAKAFSTEESSVVISCVISNNAEA------------RGLLIAQSYGIPTFVVKR 66 (215)
T ss_dssp CEEEEEEESSCCHHH-----HHHHHHTCCC-CSEEEEEEEESCTTC------------THHHHHHHTTCCEEECCB
T ss_pred CCEEEEEEECCcHHH-----HHHHHHHHcCCCCcEEEEEEeCCcch------------HHHHHHHHcCCCEEEeCc
Confidence 446788888887764 344444433 34 467777664210 124688899999998764
No 114
>3t5g_A GTP-binding protein RHEB; immunoglobulin-like beta sandwitch, PDE delta, RHEB; HET: GDP FAR; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 1xtq_A* 1xtr_A* 1xts_A* 2l0x_A* 3sea_A*
Probab=30.38 E-value=1.7e+02 Score=22.76 Aligned_cols=61 Identities=3% Similarity=0.067 Sum_probs=36.6
Q ss_pred CCCCEEEEEEeCCccccccccCccCccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHcc
Q 019498 152 TEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGE 216 (340)
Q Consensus 152 ~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~ 216 (340)
.+.|+++|++--.. ..............++.+|++.+.+...+-..+.+.+....+.+.+.
T Consensus 110 ~~~p~ilv~nK~Dl----~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~v~~l~~~l~~~~~~~ 170 (181)
T 3t5g_A 110 VQIPIMLVGNKKDL----HMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRIILEAEKM 170 (181)
T ss_dssp --CCEEEEEECTTC----TTTCCSCHHHHHHHHHHTTCEEEECCTTSHHHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECccc----hhcceecHHHHHHHHHHhCCcEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 35687777643222 11122223345667888999999998777777777777666555443
No 115
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=30.25 E-value=69 Score=27.61 Aligned_cols=82 Identities=11% Similarity=0.043 Sum_probs=45.2
Q ss_pred CCeEEEEECCcccCcchHHHHHHHHHhCCC--CEEEEEEeCCccccccccCccCccchhhhhhhcCceEEEEcCC---CH
Q 019498 125 DACAVTYFGDGGTSEGDFHAALNFSAVTEA--PVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN---DA 199 (340)
Q Consensus 125 ~~~vv~~~GDG~~~~G~~~Eal~~A~~~~L--pvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~---d~ 199 (340)
.+++|.+.|.|+. .+++--+...++ .|+.|+.|+.- ..-.++|+.+|+|+..++-. +-
T Consensus 6 ~riavl~SG~Gsn-----l~all~~~~~~~~~eI~~Vis~~~~------------a~~~~~A~~~gIp~~~~~~~~~~~r 68 (215)
T 3tqr_A 6 LPIVVLISGNGTN-----LQAIIGAIQKGLAIEIRAVISNRAD------------AYGLKRAQQADIPTHIIPHEEFPSR 68 (215)
T ss_dssp EEEEEEESSCCHH-----HHHHHHHHHTTCSEEEEEEEESCTT------------CHHHHHHHHTTCCEEECCGGGSSSH
T ss_pred cEEEEEEeCCcHH-----HHHHHHHHHcCCCCEEEEEEeCCcc------------hHHHHHHHHcCCCEEEeCccccCch
Confidence 3456666787665 445555544445 46777766420 11246889999999987632 22
Q ss_pred HHHHHHHHHHHHHhHccCCCEEEEEEEe
Q 019498 200 LAIYSAVHAAREMAIGEGRPILIEALTY 227 (340)
Q Consensus 200 ~~v~~a~~~a~~~~r~~~~P~lIe~~t~ 227 (340)
.+..+.+.+.++ + -+|=+|.+.-|
T Consensus 69 ~~~d~~~~~~l~---~-~~~Dliv~agy 92 (215)
T 3tqr_A 69 TDFESTLQKTID---H-YDPKLIVLAGF 92 (215)
T ss_dssp HHHHHHHHHHHH---T-TCCSEEEESSC
T ss_pred hHhHHHHHHHHH---h-cCCCEEEEccc
Confidence 333334433333 2 35666655444
No 116
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=30.00 E-value=1.5e+02 Score=26.86 Aligned_cols=53 Identities=9% Similarity=-0.041 Sum_probs=34.9
Q ss_pred CCCeEEEEECCcccCcchHHHHHHHHHhCC-CC--EEEEEEeCCccccccccCccCccchhhhhhhcCceEEEEc
Q 019498 124 KDACAVTYFGDGGTSEGDFHAALNFSAVTE-AP--VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVD 195 (340)
Q Consensus 124 ~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~-Lp--vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~Vd 195 (340)
+.+++|.+.|.|+ ..++|..+...+ || |+.||.|+. +...+|+.+|+|+..++
T Consensus 105 ~~ri~vl~Sg~g~-----nl~~ll~~~~~g~l~~~I~~Visn~~--------------~~~~~A~~~gIp~~~~~ 160 (302)
T 3o1l_A 105 KKRVVLMASRESH-----CLADLLHRWHSDELDCDIACVISNHQ--------------DLRSMVEWHDIPYYHVP 160 (302)
T ss_dssp CCEEEEEECSCCH-----HHHHHHHHHHTTCSCSEEEEEEESSS--------------TTHHHHHTTTCCEEECC
T ss_pred CcEEEEEEeCCch-----hHHHHHHHHHCCCCCcEEEEEEECcH--------------HHHHHHHHcCCCEEEcC
Confidence 4456677777764 456666665543 54 677776652 24567889999999884
No 117
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=29.96 E-value=79 Score=26.35 Aligned_cols=56 Identities=11% Similarity=0.031 Sum_probs=36.2
Q ss_pred CEEEEEEeCCcccccccc-CccCccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHH
Q 019498 155 PVIFICRNNGWAISTPIS-DQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAR 210 (340)
Q Consensus 155 pvi~vv~nN~~~~~~~~~-~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~ 210 (340)
.+.+||.|..|.-..+.. .......+.+.++.+|+.+....--+..++.+++++..
T Consensus 44 g~ALIInn~~f~~~~~R~G~~~Da~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~f~ 100 (178)
T 2h54_A 44 RLALIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYSVDVKKNLTASDMTTELEAFA 100 (178)
T ss_dssp CEEEEEECCCCSSSCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHH
T ss_pred CEEEEEehhhcCCCccCCCCHHHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHH
Confidence 356666666674211110 01112357788899999999887778889998888754
No 118
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=29.96 E-value=77 Score=24.58 Aligned_cols=47 Identities=15% Similarity=0.258 Sum_probs=36.9
Q ss_pred hhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHc--cCCCEEEEEEE
Q 019498 180 AVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIG--EGRPILIEALT 226 (340)
Q Consensus 180 ~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~--~~~P~lIe~~t 226 (340)
+.=+...|++.++.+...|+.++.+.+.+-++.+-. .+.|++|++..
T Consensus 8 ielKG~~~~l~vl~l~~~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~ 56 (120)
T 3ghf_A 8 IELKGSSFTLSVVHLHEAEPEVIRQALEDKIAQAPAFLKHAPVVINVSG 56 (120)
T ss_dssp CCCCCCCCCCEEEEEESCCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEE
T ss_pred EEEEcCeeeEEEEEeCCCCHHHHHHHHHHHHHhChHhhCCCcEEEEccc
Confidence 334566789999999889999999999887766543 46799999864
No 119
>3hyn_A Putative signal transduction protein; DUF1863 family protein, nucleotide-binding protein, structur genomics; HET: MSE; 1.20A {Eubacterium rectale atcc 33656}
Probab=29.96 E-value=56 Score=27.67 Aligned_cols=42 Identities=14% Similarity=0.286 Sum_probs=31.4
Q ss_pred hhhcCCCCeEEEEECCcccC-cchHHHHHHHHH-hCCCCEEEEEEe
Q 019498 119 LKMDRKDACAVTYFGDGGTS-EGDFHAALNFSA-VTEAPVIFICRN 162 (340)
Q Consensus 119 ~k~~~~~~~vv~~~GDG~~~-~G~~~Eal~~A~-~~~Lpvi~vv~n 162 (340)
.+++. ...+|+++|+=.-. .+..| ++..|. ..++|||.|-.+
T Consensus 75 eRI~~-Sk~vIllIs~~T~~s~~v~w-EIe~Ai~~~~~PII~Vy~~ 118 (189)
T 3hyn_A 75 TRLDN-SKNIILFLSSITANSRALRE-EMNYGIGTKGLPVIVIYPD 118 (189)
T ss_dssp HHHHT-EEEEEEECCTTCCCCHHHHH-HHHHHTTTTCCCEEEEETT
T ss_pred HHHHh-cCcEEEEEecCccccchhHH-HHHHHHHhcCCcEEEEECC
Confidence 34443 35688899988874 55556 599999 999999988765
No 120
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=29.59 E-value=60 Score=27.19 Aligned_cols=32 Identities=6% Similarity=-0.146 Sum_probs=19.5
Q ss_pred EEEEECCcccCcchHHHHHHHHHhCCCCEEEE
Q 019498 128 AVTYFGDGGTSEGDFHAALNFSAVTEAPVIFI 159 (340)
Q Consensus 128 vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~v 159 (340)
++.+.||+....+...++...++..+..|.+|
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~gi~v~~I 141 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNNVAIDII 141 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTTEEEEEE
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCCCEEEEE
Confidence 45555666444556666666677777666544
No 121
>2elf_A Protein translation elongation factor 1A; tRNA, pyrrolysine, structural genomics, NPPSFA; HET: CIT; 1.70A {Methanosarcina mazei}
Probab=29.19 E-value=1.3e+02 Score=27.88 Aligned_cols=85 Identities=7% Similarity=-0.119 Sum_probs=48.0
Q ss_pred CCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccccccCccCccchhhhhhhcC---ceEEE--Ec---
Q 019498 124 KDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG---VRSIR--VD--- 195 (340)
Q Consensus 124 ~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G---~~~~~--Vd--- 195 (340)
.+..++++--+|.+ ....|-+..+...++|.++|+.||..-. ...........+.++++.++ ++.+. +.
T Consensus 84 aD~ailVvd~~g~~--~qt~e~~~~~~~~~i~~~ivvvNNK~Dl-~~~~~~~~~~~i~~~l~~~~~~~~~ii~~~~SA~~ 160 (370)
T 2elf_A 84 SDIAVLCIPPQGLD--AHTGECIIALDLLGFKHGIIALTRSDST-HMHAIDELKAKLKVITSGTVLQDWECISLNTNKSA 160 (370)
T ss_dssp CSEEEEEECTTCCC--HHHHHHHHHHHHTTCCEEEEEECCGGGS-CHHHHHHHHHHHHHHTTTSTTTTCEEEECCCCTTS
T ss_pred CCEEEEEEcCCCCc--HHHHHHHHHHHHcCCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHHhcCCCceEEEeccccccc
Confidence 45555555422322 3567778888889999977788886554 11000000122334444443 67776 53
Q ss_pred ---CCCHHHHHHHHHHHHH
Q 019498 196 ---GNDALAIYSAVHAARE 211 (340)
Q Consensus 196 ---G~d~~~v~~a~~~a~~ 211 (340)
|..+.++.+++.+.+.
T Consensus 161 ~~~g~gi~~L~~~l~~~~~ 179 (370)
T 2elf_A 161 KNPFEGVDELKARINEVAE 179 (370)
T ss_dssp SSTTTTHHHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHhhcc
Confidence 6667777777766554
No 122
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=29.04 E-value=84 Score=27.05 Aligned_cols=80 Identities=20% Similarity=0.100 Sum_probs=45.0
Q ss_pred CeEEEEECCcccCcchHHHHHHHHHhCCC--CEEEEEEeCCccccccccCccCccchhhhhhhcCceEEEEcC---CCHH
Q 019498 126 ACAVTYFGDGGTSEGDFHAALNFSAVTEA--PVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDG---NDAL 200 (340)
Q Consensus 126 ~~vv~~~GDG~~~~G~~~Eal~~A~~~~L--pvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG---~d~~ 200 (340)
+++|.+.|-|+. .+++--+...++ .|+.|+.|+. . ...++|+.+|+|+..++- .+-+
T Consensus 14 ri~vl~SG~gsn-----l~all~~~~~~~~~eI~~Vis~~~-a------------~~~~~A~~~gIp~~~~~~~~~~~r~ 75 (215)
T 3da8_A 14 RLVVLASGTGSL-----LRSLLDAAVGDYPARVVAVGVDRE-C------------RAAEIAAEASVPVFTVRLADHPSRD 75 (215)
T ss_dssp EEEEEESSCCHH-----HHHHHHHSSTTCSEEEEEEEESSC-C------------HHHHHHHHTTCCEEECCGGGSSSHH
T ss_pred EEEEEEeCChHH-----HHHHHHHHhccCCCeEEEEEeCCc-h------------HHHHHHHHcCCCEEEeCcccccchh
Confidence 455555676665 444544443245 4666766653 1 135789999999999852 2333
Q ss_pred HHHHHHHHHHHHhHccCCCEEEEEEEe
Q 019498 201 AIYSAVHAAREMAIGEGRPILIEALTY 227 (340)
Q Consensus 201 ~v~~a~~~a~~~~r~~~~P~lIe~~t~ 227 (340)
+..+.+.+.++ .-+|=+|.+.-|
T Consensus 76 ~~d~~~~~~l~----~~~~Dlivlagy 98 (215)
T 3da8_A 76 AWDVAITAATA----AHEPDLVVSAGF 98 (215)
T ss_dssp HHHHHHHHHHH----TTCCSEEEEEEC
T ss_pred hhhHHHHHHHH----hhCCCEEEEcCc
Confidence 33344444443 346666666655
No 123
>1ugp_A NitrIle hydratase alpha subunit; complex, N-butyric acid, non-corrin cobalt, hydration, lyase; HET: BUA; 1.63A {Pseudonocardia thermophila} SCOP: d.149.1.1 PDB: 1ire_A 1ugr_A 1ugq_A 1ugs_A
Probab=28.66 E-value=91 Score=26.50 Aligned_cols=29 Identities=7% Similarity=0.146 Sum_probs=24.0
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q 019498 257 VTRFRKWIESNGWWNGDIESELRSSVRKQ 285 (340)
Q Consensus 257 i~~~~~~L~~~g~~~~~~~~~~~~~~~~~ 285 (340)
...++.-|+++|+++.++++.+.+.+...
T Consensus 20 ~~AL~~lL~eKGli~~~~id~~~~~~e~~ 48 (203)
T 1ugp_A 20 VKALESMLIEQGILTTSMIDRMAEIYENE 48 (203)
T ss_dssp HHHHHHHHHHTTSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHhcc
Confidence 35789999999999999999887765544
No 124
>2p1h_A APAF-1, apoptotic protease-activating factor 1; folding, unfolding, apoptosis; 1.59A {Homo sapiens} SCOP: a.77.1.3 PDB: 1cww_A 1c15_A 1cy5_A 3ygs_C 2ygs_A
Probab=28.14 E-value=35 Score=24.93 Aligned_cols=25 Identities=16% Similarity=0.252 Sum_probs=22.3
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHH
Q 019498 257 VTRFRKWIESNGWWNGDIESELRSS 281 (340)
Q Consensus 257 i~~~~~~L~~~g~~~~~~~~~~~~~ 281 (340)
+..+-.+|.++|++|+++.+.|+++
T Consensus 24 v~~lld~L~~~~vlt~~~~e~I~~~ 48 (94)
T 2p1h_A 24 TSYIMDHMISDGFLTISEEEKVRNE 48 (94)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHTS
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHcC
Confidence 5668889999999999999999886
No 125
>3qyh_A CO-type nitrIle hydratase alpha subunit; cobalt, cysteine sulfinic acid, lyase; 2.00A {Pseudomonas putida} PDB: 3qyg_A 3qxe_A 3qz9_A 3qz5_A
Probab=27.67 E-value=79 Score=27.39 Aligned_cols=27 Identities=7% Similarity=0.065 Sum_probs=22.6
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHH
Q 019498 257 VTRFRKWIESNGWWNGDIESELRSSVR 283 (340)
Q Consensus 257 i~~~~~~L~~~g~~~~~~~~~~~~~~~ 283 (340)
+..++..|+++|+++.++++.+.+.+.
T Consensus 40 ~~Al~~lL~eKG~i~~~~~~~~~~~~e 66 (226)
T 3qyh_A 40 VKALESLLIEKGLVDPAAMDLVVQTYE 66 (226)
T ss_dssp HHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 356889999999999999998877554
No 126
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=27.50 E-value=83 Score=25.52 Aligned_cols=79 Identities=10% Similarity=0.043 Sum_probs=43.9
Q ss_pred CCeEEEEECCcccCcch--HHHHHHHHHhCCCCEEEEEEeCCccccccccCccCccchhhhhhhcC-ceEEEEcCCCHHH
Q 019498 125 DACAVTYFGDGGTSEGD--FHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG-VRSIRVDGNDALA 201 (340)
Q Consensus 125 ~~~vv~~~GDG~~~~G~--~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G-~~~~~VdG~d~~~ 201 (340)
...+++++.||..+.+. ..+++..+...++++..|-.-+... .......+...|..-| -.++.++ |..+
T Consensus 110 ~~~~iillTDG~~~~~~~~~~~~~~~~~~~gi~i~~igvG~~~~------~~~~~~~L~~iA~~~~g~~~~~~~--~~~~ 181 (198)
T 1n3y_A 110 AAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQ------NRNSWKELNDIASKPSQEHIFKVE--DFDA 181 (198)
T ss_dssp SEEEEEEEESSCCBSCSSCHHHHHHHHHHTTCEEEEEEESGGGG------SSTTHHHHHHHSCSSSGGGEEEES--SGGG
T ss_pred CceEEEEECCCCCCCCcccHHHHHHHHHHCCCEEEEEEcccccc------ccccHHHHHHHHcCCCcccEEEeC--CHHH
Confidence 35789999999886433 3666777777787765553322110 0001123445555433 3346666 5666
Q ss_pred HHHHHHHHHH
Q 019498 202 IYSAVHAARE 211 (340)
Q Consensus 202 v~~a~~~a~~ 211 (340)
+...+.+..+
T Consensus 182 l~~~~~~i~~ 191 (198)
T 1n3y_A 182 LKDIQNQLKE 191 (198)
T ss_dssp GGGGHHHHHH
T ss_pred HHHHHHHHHh
Confidence 6666555443
No 127
>3oes_A GTPase rhebl1; small GTPase, structural genomics, structural genomics conso SGC, hydrolase; HET: GNP; 2.30A {Homo sapiens}
Probab=26.86 E-value=2.4e+02 Score=22.52 Aligned_cols=58 Identities=5% Similarity=0.101 Sum_probs=33.6
Q ss_pred CCCEEEEEEeCCccccccccCccCccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhH
Q 019498 153 EAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAI 214 (340)
Q Consensus 153 ~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r 214 (340)
+.|+++|++--... .............++.+|++.+.+...+-..+.+.+....+.+.
T Consensus 129 ~~piilv~nK~Dl~----~~~~v~~~~~~~~~~~~~~~~~~~Sa~~~~~v~~l~~~l~~~i~ 186 (201)
T 3oes_A 129 RVPVVLVGNKADLS----PEREVQAVEGKKLAESWGATFMESSARENQLTQGIFTKVIQEIA 186 (201)
T ss_dssp CCCEEEEEECTTCG----GGCCSCHHHHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEECccCc----cccccCHHHHHHHHHHhCCeEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 56877776433221 11122223455677788999999877666666666655554443
No 128
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=26.80 E-value=1.8e+02 Score=26.09 Aligned_cols=53 Identities=6% Similarity=-0.050 Sum_probs=34.5
Q ss_pred CCCeEEEEECCcccCcchHHHHHHHHHhCC-CC--EEEEEEeCCccccccccCccCccchhhhhhhcCceEEEEc
Q 019498 124 KDACAVTYFGDGGTSEGDFHAALNFSAVTE-AP--VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVD 195 (340)
Q Consensus 124 ~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~-Lp--vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~Vd 195 (340)
+.+++|.+.|.|+ ..++|-.+...+ || |+.||.|+. +...+|+.+|+|+..++
T Consensus 90 ~~ri~vl~Sg~g~-----~l~~ll~~~~~g~l~~~i~~Visn~~--------------~~~~~A~~~gIp~~~~~ 145 (286)
T 3n0v_A 90 RPKVVIMVSKADH-----CLNDLLYRQRIGQLGMDVVAVVSNHP--------------DLEPLAHWHKIPYYHFA 145 (286)
T ss_dssp CCEEEEEESSCCH-----HHHHHHHHHHTTSSCCEEEEEEESSS--------------TTHHHHHHTTCCEEECC
T ss_pred CcEEEEEEeCCCC-----CHHHHHHHHHCCCCCcEEEEEEeCcH--------------HHHHHHHHcCCCEEEeC
Confidence 3456677777764 456676665543 54 677776653 24456889999999875
No 129
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=26.45 E-value=75 Score=26.22 Aligned_cols=19 Identities=21% Similarity=0.212 Sum_probs=12.5
Q ss_pred chhhhhhhcCceEEEEcCC
Q 019498 179 GAVVKGRAYGVRSIRVDGN 197 (340)
Q Consensus 179 ~~~~~a~a~G~~~~~VdG~ 197 (340)
...+.++..|++++-+.++
T Consensus 110 ~~~~~ak~~g~~vi~IT~~ 128 (201)
T 3fxa_A 110 NLIPACKTKGSTLIGVTEN 128 (201)
T ss_dssp TTHHHHHHHTCEEEEEESC
T ss_pred HHHHHHHHcCCeEEEEECC
Confidence 4566677777777776543
No 130
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=26.39 E-value=2.2e+02 Score=24.70 Aligned_cols=143 Identities=10% Similarity=0.093 Sum_probs=68.4
Q ss_pred hhHHHHHHHHhhhcC--CCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEe-CCccccccccCccCccchhhhhh
Q 019498 109 LPHAVGAAYALKMDR--KDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRN-NGWAISTPISDQFRSDGAVVKGR 185 (340)
Q Consensus 109 lp~A~G~A~a~k~~~--~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~n-N~~~~~~~~~~~~~~~~~~~~a~ 185 (340)
+-..+|-.++.++.. ++-.+|+-.--|++ .=+..+|...++|++++-.. ..++..... .+ ..
T Consensus 70 ~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi-----~~a~~lA~~L~~p~~~vrk~~k~~G~~~~i------~g----~~ 134 (234)
T 3m3h_A 70 VRQTIAAGLEELIKEHFPTVEVIAGTATAGI-----AHAAWVSDRMDLPMCYVRSKAKGHGKGNQI------EG----KA 134 (234)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEEC---CH-----HHHHHHHHHHTCCEEEEC---------CCE------ES----CC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEeccchH-----HHHHHHHHHcCCCEEEEEEeeccCCcceEE------ec----cc
Confidence 445667777766543 12223333333333 23456777889998765321 112211000 00 00
Q ss_pred hcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEEecCCCCCCCCCCCCCCChHHHHHHHhCCC------hHHH
Q 019498 186 AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQD------PVTR 259 (340)
Q Consensus 186 a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t~R~~gHs~~dd~~~Yr~~~e~~~~~~~~d------pi~~ 259 (340)
--|-.++.|| |+..-=.++.++++.+++. |+.++.+.+.=.. ....-.+...+..= -+..
T Consensus 135 ~~Gk~VLIVD--DvitTG~Tl~~a~~~L~~~-Ga~vv~v~~l~~~-----------~~~~~~e~l~~~gi~v~sL~~~~d 200 (234)
T 3m3h_A 135 EKGQKVVVVE--DLISTGGSAITCVEALREA-GCEVLGIVSIFTY-----------ELEAGKEKLEAANVASYSLSDYSA 200 (234)
T ss_dssp CTTCEEEEEE--EEESSSHHHHHHHHHHHHT-TCEEEEEEEEEEC-----------CCHHHHHHHHHTTCCEEESSCHHH
T ss_pred CCCCEEEEEe--cccchhHHHHHHHHHHHHC-CCEEEEEEEEEEC-----------cCchHHHHHHhcCCCEEEEeeHHH
Confidence 1277888888 5543334444444444443 5666655442110 01111122221121 2456
Q ss_pred HHHHHHHCCCCCHHHHHHHHH
Q 019498 260 FRKWIESNGWWNGDIESELRS 280 (340)
Q Consensus 260 ~~~~L~~~g~~~~~~~~~~~~ 280 (340)
+-+++.+.|.+++++++.+++
T Consensus 201 l~~~~~~~~~i~~~~~~~~~~ 221 (234)
T 3m3h_A 201 LTEVAAEKGIIGQAETKKLQE 221 (234)
T ss_dssp HHHHHHHTTSSCHHHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHH
Confidence 778888999999998876643
No 131
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=26.31 E-value=3e+02 Score=23.29 Aligned_cols=81 Identities=19% Similarity=0.139 Sum_probs=46.6
Q ss_pred CeEEEEECCcccCcchHHHHHHHHHhC---CCCEEEEEEeCCccccccccCccCccchhhhhhhcCceEEEEcC---CCH
Q 019498 126 ACAVTYFGDGGTSEGDFHAALNFSAVT---EAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDG---NDA 199 (340)
Q Consensus 126 ~~vv~~~GDG~~~~G~~~Eal~~A~~~---~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG---~d~ 199 (340)
+++|.+.|.|+.. ++|.-+... +..|+.||.|+.- ....++|+.+|+|+..++- .+-
T Consensus 2 riaVl~SG~Gs~L-----~aLi~~~~~~~~~~~I~~Vvs~~~~------------~~~~~~A~~~gIp~~~~~~~~~~~r 64 (209)
T 1meo_A 2 RVAVLISGTGSNL-----QALIDSTREPNSSAQIDIVISNKAA------------VAGLDKAERAGIPTRVINHKLYKNR 64 (209)
T ss_dssp EEEEEESSSCTTH-----HHHHHHHHSTTCSCEEEEEEESSTT------------CHHHHHHHHTTCCEEECCGGGSSSH
T ss_pred eEEEEEECCchHH-----HHHHHHHhcCCCCcEEEEEEeCCCC------------hHHHHHHHHcCCCEEEECccccCch
Confidence 4678888888763 444433332 3357777776531 1124678999999987763 233
Q ss_pred HHHHHHHHHHHHHhHccCCCEEEEEEEe
Q 019498 200 LAIYSAVHAAREMAIGEGRPILIEALTY 227 (340)
Q Consensus 200 ~~v~~a~~~a~~~~r~~~~P~lIe~~t~ 227 (340)
++..+.+.+.++ .-+|-+|.+.-|
T Consensus 65 ~~~~~~~~~~l~----~~~~Dliv~a~y 88 (209)
T 1meo_A 65 VEFDSAIDLVLE----EFSIDIVCLAGF 88 (209)
T ss_dssp HHHHHHHHHHHH----HTTCCEEEEESC
T ss_pred hhhhHHHHHHHH----hcCCCEEEEcch
Confidence 333334433333 236767766665
No 132
>4fm4_A NitrIle hydratase alpha subunit; iron type hydratase, hydrolysis, sulfinic acid, lyase; 2.38A {Comamonas testosteroni}
Probab=26.11 E-value=1e+02 Score=26.44 Aligned_cols=27 Identities=7% Similarity=0.058 Sum_probs=22.1
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHH
Q 019498 257 VTRFRKWIESNGWWNGDIESELRSSVR 283 (340)
Q Consensus 257 i~~~~~~L~~~g~~~~~~~~~~~~~~~ 283 (340)
++.++.-|+++|+++++.++.+.+.+.
T Consensus 13 v~ALe~lL~eKGli~~~~id~~~~~~~ 39 (209)
T 4fm4_A 13 VDALFVLTKELGLVTDQTVPDYEDALM 39 (209)
T ss_dssp HHHHHHHHHHTTSCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 345888999999999999988877544
No 133
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=26.05 E-value=1.1e+02 Score=27.70 Aligned_cols=53 Identities=11% Similarity=-0.045 Sum_probs=34.0
Q ss_pred CCCeEEEEECCcccCcchHHHHHHHHHhCC-CC--EEEEEEeCCccccccccCccCccchhhhhhhcCceEEEEc
Q 019498 124 KDACAVTYFGDGGTSEGDFHAALNFSAVTE-AP--VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVD 195 (340)
Q Consensus 124 ~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~-Lp--vi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~Vd 195 (340)
+.+++|.+.|.|+ ..++|..+...+ || |..||.|+. +...+|+.+|+|+..++
T Consensus 95 ~~ri~vl~Sg~g~-----~l~~ll~~~~~g~l~~~i~~Visn~~--------------~~~~~A~~~gIp~~~~~ 150 (292)
T 3lou_A 95 RPKVLIMVSKLEH-----CLADLLFRWKMGELKMDIVGIVSNHP--------------DFAPLAAQHGLPFRHFP 150 (292)
T ss_dssp CCEEEEEECSCCH-----HHHHHHHHHHHTSSCCEEEEEEESSS--------------TTHHHHHHTTCCEEECC
T ss_pred CCEEEEEEcCCCc-----CHHHHHHHHHcCCCCcEEEEEEeCcH--------------HHHHHHHHcCCCEEEeC
Confidence 3456677777664 456666655433 54 677776652 23456889999999865
No 134
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=25.97 E-value=72 Score=28.95 Aligned_cols=82 Identities=11% Similarity=-0.054 Sum_probs=46.8
Q ss_pred EEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccccccCccCccchhhhhhhcCceEEEEcCCCHHHHHHHHHH
Q 019498 129 VTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHA 208 (340)
Q Consensus 129 v~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~ 208 (340)
|+|+|-+.|. +...++|.-+ +..|+.|+.|..-. .. ........++|+.+|+|++..+-.+-.++.+.++
T Consensus 3 ivf~gt~~fa-~~~L~~L~~~---~~~i~~Vvt~~d~~----~g-~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~l~- 72 (305)
T 2bln_A 3 TVVFAYHDMG-CLGIEALLAA---GYEISAIFTHTDNP----GE-KAFYGSVARLAAERGIPVYAPDNVNHPLWVERIA- 72 (305)
T ss_dssp EEEEECHHHH-HHHHHHHHHT---TCEEEEEECCCC-----------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHH-
T ss_pred EEEEEcCHHH-HHHHHHHHHC---CCcEEEEEcCCCCC----CC-CcCccHHHHHHHHcCCCEECCCcCCcHHHHHHHH-
Confidence 6778888775 2455655433 55677777654211 11 1123457889999999999887433233333332
Q ss_pred HHHHhHccCCCEEEEEEEe
Q 019498 209 AREMAIGEGRPILIEALTY 227 (340)
Q Consensus 209 a~~~~r~~~~P~lIe~~t~ 227 (340)
+ -.|=+|.+.-|
T Consensus 73 ------~-~~~Dliv~~~y 84 (305)
T 2bln_A 73 ------Q-LSPDVIFSFYY 84 (305)
T ss_dssp ------H-TCCSEEEEESC
T ss_pred ------h-cCCCEEEEecc
Confidence 2 35666666665
No 135
>3a8g_A NitrIle hydratase subunit alpha; Fe, iron, lyase, metal-binding, oxidation; 1.11A {Rhodococcus erythropolis} PDB: 3a8h_A 3a8l_A 3a8o_A 2zpb_A 2ahj_A 2cyz_A 2cz6_A 2cz7_A 2d0q_A 2cz1_A 2zpe_A 2zpf_A 2zpg_A 2zph_A 2zpi_A 2qdy_A 3a8m_A 2zcf_A 1ahj_A 2cz0_A*
Probab=25.09 E-value=82 Score=27.00 Aligned_cols=28 Identities=4% Similarity=0.075 Sum_probs=22.9
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q 019498 258 TRFRKWIESNGWWNGDIESELRSSVRKQ 285 (340)
Q Consensus 258 ~~~~~~L~~~g~~~~~~~~~~~~~~~~~ 285 (340)
..++..|+++|+++.++++.+.+-+...
T Consensus 24 ~Al~~ll~ekG~i~~~~~~~~~~~~e~~ 51 (207)
T 3a8g_A 24 WALFRALDGKGLVPDGYVEGWKKTFEED 51 (207)
T ss_dssp HHHHHHHHTTTCSCTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHhcc
Confidence 4689999999999999999887755443
No 136
>1m72_A Caspase-1; caspase, cysteine protease, hydrolase-hydrolase inhibitor CO; 2.30A {Spodoptera frugiperda} SCOP: c.17.1.1 PDB: 3sip_B
Probab=24.86 E-value=76 Score=28.28 Aligned_cols=33 Identities=9% Similarity=0.046 Sum_probs=26.9
Q ss_pred cchhhhhhhcCceEEEEcCCCHHHHHHHHHHHH
Q 019498 178 DGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAR 210 (340)
Q Consensus 178 ~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~ 210 (340)
..+.+.++.+|+.+....--+..++.+++++..
T Consensus 59 ~~L~~~f~~LGF~V~~~~dlt~~em~~~l~~~~ 91 (272)
T 1m72_A 59 DNLSKVLKTLGFKVTVFPNLKSEEINKFIQQTA 91 (272)
T ss_dssp HHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEecCcCHHHHHHHHHHHH
Confidence 457788889999998888778888888888765
No 137
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=24.79 E-value=1.1e+02 Score=26.23 Aligned_cols=82 Identities=10% Similarity=0.093 Sum_probs=44.0
Q ss_pred CeEEEEECCcccCcchHHHHHHHHHhCCC--CEEEEEEeCCccccccccCccCccchhhhhhhcCceEEEEcCC---CHH
Q 019498 126 ACAVTYFGDGGTSEGDFHAALNFSAVTEA--PVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN---DAL 200 (340)
Q Consensus 126 ~~vv~~~GDG~~~~G~~~Eal~~A~~~~L--pvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~---d~~ 200 (340)
++++.+.|-|++.+ .+.+++ ...++ .++.|+.|+. .....++|+.+|+|+..++-. +-+
T Consensus 3 rI~vl~SG~g~~~~-~~l~~l---~~~~~~~~i~~Vvs~~~------------~~~~~~~A~~~gIp~~~~~~~~~~~r~ 66 (216)
T 2ywr_A 3 KIGVLVSGRGSNLQ-AIIDAI---ESGKVNASIELVISDNP------------KAYAIERCKKHNVECKVIQRKEFPSKK 66 (216)
T ss_dssp EEEEEECSCCHHHH-HHHHHH---HTTSSCEEEEEEEESCT------------TCHHHHHHHHHTCCEEECCGGGSSSHH
T ss_pred EEEEEEeCCcHHHH-HHHHHH---HhCCCCCeEEEEEeCCC------------ChHHHHHHHHcCCCEEEeCcccccchh
Confidence 35556668887643 222322 23345 5667776642 112467899999999986632 223
Q ss_pred HHHHHHHHHHHHhHccCCCEEEEEEEe
Q 019498 201 AIYSAVHAAREMAIGEGRPILIEALTY 227 (340)
Q Consensus 201 ~v~~a~~~a~~~~r~~~~P~lIe~~t~ 227 (340)
+..+.+.+.++ .-+|=+|.+.-|
T Consensus 67 ~~~~~~~~~l~----~~~~Dliv~a~y 89 (216)
T 2ywr_A 67 EFEERMALELK----KKGVELVVLAGF 89 (216)
T ss_dssp HHHHHHHHHHH----HTTCCEEEESSC
T ss_pred hhhHHHHHHHH----hcCCCEEEEeCc
Confidence 33333333332 235666666555
No 138
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=24.75 E-value=91 Score=19.36 Aligned_cols=22 Identities=14% Similarity=0.311 Sum_probs=16.9
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHH
Q 019498 262 KWIESNGWWNGDIESELRSSVRK 284 (340)
Q Consensus 262 ~~L~~~g~~~~~~~~~~~~~~~~ 284 (340)
+.|..+| ++++|+.+++.+.++
T Consensus 10 qalkkeg-fspeelaaleselqa 31 (48)
T 1g6u_A 10 QALKKEG-FSPEELAALESELQA 31 (48)
T ss_dssp HHHHHTT-CSHHHHHHHHHHHHH
T ss_pred HHHHHcC-CCHHHHHHHHHHHHH
Confidence 3456677 689999999888765
No 139
>1nw9_B Caspase 9, apoptosis-related cysteine protease; XIAP, caspase inhibition, caspase activation, dimerization; 2.40A {Homo sapiens} SCOP: c.17.1.1 PDB: 1jxq_A* 2ar9_A
Probab=24.57 E-value=1.2e+02 Score=26.87 Aligned_cols=47 Identities=4% Similarity=-0.158 Sum_probs=33.0
Q ss_pred cchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEE
Q 019498 178 DGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEAL 225 (340)
Q Consensus 178 ~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~ 225 (340)
..+.+.++.+|+.+....--+..++.+++++..+.. ..+..+++-+.
T Consensus 49 ~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~~~~~~-h~~~D~~vv~i 95 (277)
T 1nw9_B 49 EKLRRRFSSLHFMVEVKGDLTAKKMVLALLELARQD-HGALDCCVVVI 95 (277)
T ss_dssp HHHHHHHHHTTEEEEEEESCCHHHHHHHHHHHHHSC-CTTCSEEEEEE
T ss_pred HHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhh-cccCCeEEEEE
Confidence 457888899999999888778899999998765421 12334555443
No 140
>2dko_A Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 1nme_A 2h5i_A 2h5j_A 2h65_A 2xyg_A* 2xyh_A 2xyp_A* 2xzd_A 2xzt_A 2y0b_A 3edq_A 1gfw_A 1re1_A* 1pau_A* 1rhk_A* 1rhm_A* 1rhq_A* 1rhr_A* 1rhu_A* 1rhj_A* ...
Probab=24.27 E-value=1.1e+02 Score=24.63 Aligned_cols=48 Identities=8% Similarity=-0.052 Sum_probs=33.4
Q ss_pred cchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEE
Q 019498 178 DGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 226 (340)
Q Consensus 178 ~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t 226 (340)
..+.+.++.+|+.+...+--+..++.+.+++..+.- ..+...+|-+..
T Consensus 44 ~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~~~~~d-h~~~dc~vv~il 91 (146)
T 2dko_A 44 ANLRETFRNLKYEVRNKNDLTREEIVELMRDVSKED-HSKRSSFVCVLL 91 (146)
T ss_dssp HHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHSC-CTTEEEEEEEEE
T ss_pred HHHHHHHHHCCCEEEEeeCCCHHHHHHHHHHHHHhh-cCCCCeEEEEec
Confidence 457888999999999888778899999988765421 123345554443
No 141
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=24.16 E-value=1.3e+02 Score=24.92 Aligned_cols=19 Identities=21% Similarity=0.384 Sum_probs=12.3
Q ss_pred chhhhhhhcCceEEEEcCC
Q 019498 179 GAVVKGRAYGVRSIRVDGN 197 (340)
Q Consensus 179 ~~~~~a~a~G~~~~~VdG~ 197 (340)
+..+.|+..|++++-+.++
T Consensus 107 ~~~~~ak~~g~~vI~IT~~ 125 (200)
T 1vim_A 107 NISKKAKDIGSKLVAVTGK 125 (200)
T ss_dssp HHHHHHHHHTCEEEEEESC
T ss_pred HHHHHHHHCCCeEEEEECC
Confidence 4556666777777776553
No 142
>1qtn_A Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_A* 3kjq_A* 2y1l_A 2c2z_A 1qdu_A* 1f9e_A*
Probab=23.82 E-value=1.5e+02 Score=24.13 Aligned_cols=48 Identities=10% Similarity=-0.014 Sum_probs=34.0
Q ss_pred cchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEE
Q 019498 178 DGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 226 (340)
Q Consensus 178 ~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t 226 (340)
..+.+.++.+|+.+...+--+..++...+++..+. -.....++|.+..
T Consensus 58 ~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~~~~~-dh~~~dc~vv~il 105 (164)
T 1qtn_A 58 GALTTTFEELHFEIKPHDDCTVEQIYEILKIYQLM-DHSNMDCFICCIL 105 (164)
T ss_dssp HHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHS-CCTTCSCEEEEEE
T ss_pred HHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHHh-hccCCCEEEEEeC
Confidence 35778899999999988877889999999877432 1123455655543
No 143
>3hht_B NitrIle hydratase beta subunit; alpha and beta proteins (A+B), lyase; 1.16A {Geobacillus pallidus} SCOP: b.34.4.4 PDB: 2dpp_B 1v29_B
Probab=23.70 E-value=1.6e+02 Score=25.69 Aligned_cols=29 Identities=10% Similarity=0.074 Sum_probs=24.2
Q ss_pred HHHHHhCCChHHHHHHHHHHCCCCCHHHHHHHHHH
Q 019498 247 IEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSS 281 (340)
Q Consensus 247 ~~~~~~~~dpi~~~~~~L~~~g~~~~~~~~~~~~~ 281 (340)
++.|- .-+.+.|+++|++|.+||++..++
T Consensus 73 Ye~WL------~ale~lLvekGvit~~EL~~r~~~ 101 (229)
T 3hht_B 73 YGHWI------ATVAYNLVDTGVLDEKELDERTEV 101 (229)
T ss_dssp HHHHH------HHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred HHHHH------HHHHHHHHHcCCCCHHHHHHHHHh
Confidence 56774 568999999999999999887665
No 144
>3hht_A NitrIle hydratase alpha subunit; alpha and beta proteins (A+B), lyase; 1.16A {Geobacillus pallidus} SCOP: d.149.1.1 PDB: 2dpp_A 1v29_A
Probab=23.22 E-value=1.1e+02 Score=26.48 Aligned_cols=27 Identities=7% Similarity=0.117 Sum_probs=22.8
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHH
Q 019498 257 VTRFRKWIESNGWWNGDIESELRSSVR 283 (340)
Q Consensus 257 i~~~~~~L~~~g~~~~~~~~~~~~~~~ 283 (340)
+..++..|+++|+++.++++.+.+-+.
T Consensus 29 ~~Al~~ll~ekg~i~~~~~~~~~~~~e 55 (216)
T 3hht_A 29 AKALESLLIEKGHLSSDAIERVIKHYE 55 (216)
T ss_dssp HHHHHHHHHHTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 457899999999999999999876543
No 145
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=22.71 E-value=1.9e+02 Score=26.35 Aligned_cols=61 Identities=18% Similarity=0.241 Sum_probs=35.6
Q ss_pred CCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccccccCccCccchhh----hhhhcCceEEEEcCCCHH
Q 019498 125 DACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVV----KGRAYGVRSIRVDGNDAL 200 (340)
Q Consensus 125 ~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~----~a~a~G~~~~~VdG~d~~ 200 (340)
+...|+++||+ + .+.+--+..++.++..+.++. |..-. +.+++.+ .++..|..+...+ |++
T Consensus 154 ~gl~va~vGD~--~-rva~Sl~~~~~~~g~~v~~~~---------P~~~~-~~~~~~~~~~~~a~~~g~~~~~~~--d~~ 218 (315)
T 1pvv_A 154 KGVKVVYVGDG--N-NVAHSLMIAGTKLGADVVVAT---------PEGYE-PDEKVIKWAEQNAAESGGSFELLH--DPV 218 (315)
T ss_dssp TTCEEEEESCC--C-HHHHHHHHHHHHTTCEEEEEC---------CTTCC-CCHHHHHHHHHHHHHHTCEEEEES--CHH
T ss_pred CCcEEEEECCC--c-chHHHHHHHHHHCCCEEEEEC---------Ccccc-CCHHHHHHHHHHHHHcCCeEEEEe--CHH
Confidence 67899999998 2 245554555667777666553 22211 1223433 3447787766665 664
No 146
>4fx5_A VON willebrand factor type A; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, blood clotting; HET: MSE; 1.73A {Catenulispora acidiphila}
Probab=22.15 E-value=4.9e+02 Score=24.70 Aligned_cols=78 Identities=9% Similarity=-0.037 Sum_probs=44.8
Q ss_pred CeEEEEECCcccCcchHH--HHHHHHHhCCCCEEEEEEeCCccccccccCccCccchhhhhhhcCceEEEEcCCCHHHHH
Q 019498 126 ACAVTYFGDGGTSEGDFH--AALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIY 203 (340)
Q Consensus 126 ~~vv~~~GDG~~~~G~~~--Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~ 203 (340)
...|+++-||.-+.+... ....-+...++++..|-.-+. .....+..+|..-|-.+..++ |+.++.
T Consensus 180 ~~~IILLTDG~~~~~~~~~l~~~~~a~~~~i~i~tiGiG~~----------~d~~~L~~IA~~tgG~~~~v~--d~~~L~ 247 (464)
T 4fx5_A 180 IKHAILLTDGKDESETPADLARAIQSSIGNFTADCRGIGED----------WEPKELRKIADALLGTVGIIR--DPATLA 247 (464)
T ss_dssp EEEEEEEESSCCTTSCHHHHHHHHHHHTTTCEEEEEEESSS----------SCHHHHHHHHHHTTCCEEEES--SGGGHH
T ss_pred CCEEEEEcCCCCCCCChHHHHHHHHHhcCCCeEEEEEeCCc----------cCHHHHHHHHHhCCCEEEEcC--CHHHHH
Confidence 378889999997643321 111112233444433322111 111235567777777788887 788888
Q ss_pred HHHHHHHHHhHc
Q 019498 204 SAVHAAREMAIG 215 (340)
Q Consensus 204 ~a~~~a~~~~r~ 215 (340)
.++.+.+..+..
T Consensus 248 ~~f~~i~~~~~s 259 (464)
T 4fx5_A 248 EDFREMTAKSMG 259 (464)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHhhc
Confidence 888888776543
No 147
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=21.94 E-value=2.6e+02 Score=26.63 Aligned_cols=66 Identities=20% Similarity=0.172 Sum_probs=36.2
Q ss_pred hHHHHHHH-HHhCCCCEEEEEEeCCccccccccCccCccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCC
Q 019498 141 DFHAALNF-SAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRP 219 (340)
Q Consensus 141 ~~~Eal~~-A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P 219 (340)
..--++.. |+..++++++|+-.+- ...-.+..++||..++.+++.+ ...++.+.+.+.+++.++.
T Consensus 185 NhG~AlA~aAa~~Gl~~~IvmP~~~------------s~~k~~~~r~~GAeVv~v~~~~--~~~~a~~~a~el~~~~~~~ 250 (430)
T 4aec_A 185 NTGIGLAFIAASRGYRLILTMPASM------------SMERRVLLKAFGAELVLTDPAK--GMTGAVQKAEEILKNTPDA 250 (430)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEETTS------------CHHHHHHHHHTTCEEEEECGGG--HHHHHHHHHHHHHHHSTTE
T ss_pred HHHHHHHHHHHHhCCEEEEEEcCCC------------CHHHHHHHHHCCCEEEEECCCC--ChHHHHHHHHHHHHhcCCc
Confidence 33334444 5668999988875431 1123346678999999987422 2233444444444444343
Q ss_pred E
Q 019498 220 I 220 (340)
Q Consensus 220 ~ 220 (340)
.
T Consensus 251 ~ 251 (430)
T 4aec_A 251 Y 251 (430)
T ss_dssp E
T ss_pred E
Confidence 3
No 148
>1kao_A RAP2A; GTP-binding protein, small G protein, GDP, RAS; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2rap_A* 3rap_R*
Probab=21.80 E-value=2.6e+02 Score=20.99 Aligned_cols=57 Identities=9% Similarity=0.130 Sum_probs=33.2
Q ss_pred CCCCEEEEEEeCCccccccccCccCccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHH
Q 019498 152 TEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREM 212 (340)
Q Consensus 152 ~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~ 212 (340)
.+.|+++|++--.. . .............++.+|++.+.+...+-..+.+.+....+.
T Consensus 107 ~~~piilv~nK~Dl--~--~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~gi~~l~~~l~~~ 163 (167)
T 1kao_A 107 EKVPVILVGNKVDL--E--SEREVSSSEGRALAEEWGCPFMETSAKSKTMVDELFAEIVRQ 163 (167)
T ss_dssp SCCCEEEEEECGGG--G--GGCCSCHHHHHHHHHHHTSCEEEECTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCcc--c--ccccCCHHHHHHHHHHhCCCEEEecCCCCcCHHHHHHHHHHH
Confidence 46788777643221 1 111112223455677789999999877766666666655443
No 149
>3con_A GTPase NRAS; structural genomics consortium, SGC, GDP, oncogene, disease mutation, golgi apparatus, GTP-binding, lipoprotein membrane, methylation; HET: GDP; 1.65A {Homo sapiens} PDB: 2pmx_A* 3gft_A* 4q21_A*
Probab=21.66 E-value=1.7e+02 Score=23.10 Aligned_cols=54 Identities=11% Similarity=0.225 Sum_probs=30.6
Q ss_pred CCCCEEEEEEeCCccccccccCccCccchhhhhhhcCceEEEEc---CCCHHHHHHHHHHHH
Q 019498 152 TEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVD---GNDALAIYSAVHAAR 210 (340)
Q Consensus 152 ~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~Vd---G~d~~~v~~a~~~a~ 210 (340)
.+.|+++|++--... . .........+.++.+|++.+.+. |.++.++...+.+.+
T Consensus 125 ~~~p~ilv~nK~Dl~--~---~~~~~~~~~~~~~~~~~~~~~~Sa~~~~gi~~l~~~l~~~~ 181 (190)
T 3con_A 125 DDVPMVLVGNKCDLP--T---RTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREI 181 (190)
T ss_dssp SCCCEEEEEECTTCS--C---CCSCHHHHHHHHHHHTCCEEECCTTTCTTHHHHHHHHHHHH
T ss_pred CCCeEEEEEECCcCC--c---ccCCHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHHH
Confidence 367887776432211 1 11122345566777898888875 556666666555444
No 150
>3q85_A GTP-binding protein REM 2; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.76A {Mus musculus} SCOP: c.37.1.8 PDB: 4aii_A*
Probab=21.58 E-value=1.6e+02 Score=22.54 Aligned_cols=54 Identities=11% Similarity=0.190 Sum_probs=31.1
Q ss_pred CCCEEEEEEeCCccccccccCccCccchhhhhhhcCceEEEEc---CCCHHHHHHHHHHHH
Q 019498 153 EAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVD---GNDALAIYSAVHAAR 210 (340)
Q Consensus 153 ~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~Vd---G~d~~~v~~a~~~a~ 210 (340)
+.|+++|.+--... .............++.+|++.+.+. |.++.++...+.+.+
T Consensus 109 ~~p~ilv~nK~Dl~----~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~v~~l~~~l~~~i 165 (169)
T 3q85_A 109 DLPVILVGNKSDLA----RSREVSLEEGRHLAGTLSCKHIETSAALHHNTRELFEGAVRQI 165 (169)
T ss_dssp CCCEEEEEECTTCG----GGCCSCHHHHHHHHHHTTCEEEECBTTTTBSHHHHHHHHHHHH
T ss_pred CCCEEEEeeCcchh----hcccCCHHHHHHHHHHcCCcEEEecCccCCCHHHHHHHHHHHH
Confidence 67888777433221 1122222345567788899998875 455666655554443
No 151
>2nn3_C Caspase-1; cysteine protease, hydrolase; 3.00A {Spodoptera frugiperda}
Probab=21.51 E-value=1.4e+02 Score=27.27 Aligned_cols=56 Identities=14% Similarity=0.137 Sum_probs=37.0
Q ss_pred EEEEEEeCCccccccccC---ccCccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHH
Q 019498 156 VIFICRNNGWAISTPISD---QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAARE 211 (340)
Q Consensus 156 vi~vv~nN~~~~~~~~~~---~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~ 211 (340)
+.+||.|..|....-..+ ......+.+.++.+|+.+....--+..++.+++++..+
T Consensus 62 ~aLIInN~~F~~~~l~~R~Gt~~Da~~L~~~f~~LGF~V~~~~dlt~~em~~~l~~f~~ 120 (310)
T 2nn3_C 62 MAIIFNHEHFDIHSLKSRTGTNVDSDNLSKVLKTLGFKVTVFPNLKSEEINKFIQQTAE 120 (310)
T ss_dssp EEEEEECCCCSSTTCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHS
T ss_pred EEEEEechhcCCCCcccCCCCHHHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHH
Confidence 566666656653210111 11224578889999999998887788999999887653
No 152
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=21.17 E-value=1.4e+02 Score=27.19 Aligned_cols=79 Identities=14% Similarity=0.116 Sum_probs=43.1
Q ss_pred hhHHHHHHHHhhh-cC-CCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeCCccccccccCccCccchhhhhhh
Q 019498 109 LPHAVGAAYALKM-DR-KDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRA 186 (340)
Q Consensus 109 lp~A~G~A~a~k~-~~-~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a 186 (340)
-..++-=.+..+- .+ -+...|+++|||.-+. +.+.-+..++.++..+.+++ |.. ....+++.+.++.
T Consensus 136 PtQ~LaDl~Ti~e~~g~l~gl~va~vGD~~~~r-va~Sl~~~~~~~G~~v~~~~---------P~~-~~~~~~~~~~~~~ 204 (308)
T 1ml4_A 136 PTQTLLDLYTIKKEFGRIDGLKIGLLGDLKYGR-TVHSLAEALTFYDVELYLIS---------PEL-LRMPRHIVEELRE 204 (308)
T ss_dssp HHHHHHHHHHHHHHSSCSSSEEEEEESCTTTCH-HHHHHHHHGGGSCEEEEEEC---------CGG-GCCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCCCeEEEEeCCCCcCc-hHHHHHHHHHHCCCEEEEEC---------Ccc-ccCCHHHHHHHHH
Confidence 4444443333332 23 2678999999996531 44444555566766555543 222 1122346666777
Q ss_pred cCceEEEEcCCCHH
Q 019498 187 YGVRSIRVDGNDAL 200 (340)
Q Consensus 187 ~G~~~~~VdG~d~~ 200 (340)
.|......+ |+.
T Consensus 205 ~g~~~~~~~--d~~ 216 (308)
T 1ml4_A 205 KGMKVVETT--TLE 216 (308)
T ss_dssp TTCCEEEES--CTH
T ss_pred cCCeEEEEc--CHH
Confidence 787755555 654
No 153
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=21.14 E-value=74 Score=25.92 Aligned_cols=34 Identities=9% Similarity=0.101 Sum_probs=26.7
Q ss_pred CCeEEEEECCcccCcchHHHHHHHHHhCCCCEEE
Q 019498 125 DACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIF 158 (340)
Q Consensus 125 ~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~ 158 (340)
-++.+.++|-|....+...|...+|...++||+.
T Consensus 34 AkrPvil~G~g~~~~~a~~~l~~lae~~~iPV~~ 67 (170)
T 3cf4_G 34 AKRPLLMVGTLALDPELLDRVVKISKAANIPIAA 67 (170)
T ss_dssp CSSEEEEECSTTCCHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCCEEEECCCccchhHHHHHHHHHHHhCCCEEE
Confidence 3457788888888767677778899999999853
No 154
>3ljc_A ATP-dependent protease LA; LON N-domain, allosteric enzyme, ATP-binding, DNA-binding, H nucleotide-binding, serine protease, stress respo; 2.60A {Escherichia coli}
Probab=20.78 E-value=2.3e+02 Score=24.46 Aligned_cols=68 Identities=9% Similarity=0.123 Sum_probs=48.2
Q ss_pred ChHHHHHHHhCCChHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccccccccccCCCccHHHHHHH
Q 019498 243 PVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHS 322 (340)
Q Consensus 243 ~~~e~~~~~~~~dpi~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~p~~~~~~~~v~~~~~~~~~~~~~~ 322 (340)
+.++...+-+..|+..|++.-+.- +-.+-++.+++++++++|.+-+++..+. ..+.+|.++
T Consensus 183 ~~~eKQ~LLe~~d~~~Rl~~l~~l--L~~e~e~~~l~~~I~~~v~~~~~k~Qre-----------------y~LrEQlk~ 243 (252)
T 3ljc_A 183 KLADKQSVLEMSDVNERLEYLMAM--MESEIDLLQVEKRIRNRVKKQMEKSQRE-----------------YYLNEQMKA 243 (252)
T ss_dssp CHHHHHHHHHCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHH
T ss_pred CHHHHHHHHhcCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHH
Confidence 445555555567888887765432 1236688889999999998888877663 247789988
Q ss_pred HHHHHHh
Q 019498 323 LRETIKK 329 (340)
Q Consensus 323 l~~~~~~ 329 (340)
++++|..
T Consensus 244 IqkELGe 250 (252)
T 3ljc_A 244 IQKELGE 250 (252)
T ss_dssp HHHHHHS
T ss_pred HHHHhCC
Confidence 9888863
No 155
>3od5_A Caspase-6; caspase domain, apoptotic protease, hydrolase-hydrolase INHI complex; 1.60A {Homo sapiens} SCOP: c.17.1.0 PDB: 3k7e_A 3s70_A 3v6m_A 3v6l_A 3nr2_A 4fxo_A 2wdp_A 3nkf_A 3s8e_A 4ejf_A 3qnw_A* 3p4u_A* 3p45_B 3qnw_B* 3p4u_B*
Probab=20.77 E-value=1.3e+02 Score=26.75 Aligned_cols=55 Identities=9% Similarity=0.087 Sum_probs=36.7
Q ss_pred EEEEEEeCCccccccc-cC---ccCccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHH
Q 019498 156 VIFICRNNGWAISTPI-SD---QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAR 210 (340)
Q Consensus 156 vi~vv~nN~~~~~~~~-~~---~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~ 210 (340)
+.+||+|-.|...... .+ ......+.+.++.+|+.+....--+..++.++++++.
T Consensus 23 ~aLIInn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~V~~~~dlt~~em~~~l~~~~ 81 (278)
T 3od5_A 23 IALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVS 81 (278)
T ss_dssp EEEEEECCCCCGGGCCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHH
T ss_pred EEEEEeccccCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHH
Confidence 5566666556532111 11 1123457888999999999988788899999999864
No 156
>2o3a_A UPF0106 protein AF_0751; structural genomics, unknown function, PSI-2, protein structure initiative; 2.20A {Archaeoglobus fulgidus} SCOP: c.116.1.8
Probab=20.77 E-value=1.1e+02 Score=25.36 Aligned_cols=41 Identities=24% Similarity=0.468 Sum_probs=31.6
Q ss_pred chhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEE
Q 019498 179 GAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 223 (340)
Q Consensus 179 ~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe 223 (340)
-.+-.|+|||...+...+.|. .+.+.+....++ -+||..||
T Consensus 23 HV~LtARAfGA~~iil~~~D~-~v~esv~dV~~r---wGG~F~ve 63 (178)
T 2o3a_A 23 HVALTARAFGAKGIYFDTEDK-SVFESVRDVVER---WGGDFFIK 63 (178)
T ss_dssp HHHHHHHHTTCSEEEESSCCH-HHHHHHHHHHHH---HCSCCEEE
T ss_pred HHHHHHHHhCCCeeEEeCCCH-HHHHHHHHHHHh---cCCceEEE
Confidence 355678999999999999875 577777776664 67887777
No 157
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=20.64 E-value=3.3e+02 Score=24.52 Aligned_cols=46 Identities=17% Similarity=0.142 Sum_probs=25.6
Q ss_pred chHHHHHHH-HHhCCCCEEEEEEeCCccccccccCccCccchhhhhhhcCceEEEEcCC
Q 019498 140 GDFHAALNF-SAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN 197 (340)
Q Consensus 140 G~~~Eal~~-A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~ 197 (340)
|..--++.. |+..++|+++|+-.+- + ..-....+.||..++.+++.
T Consensus 81 GN~g~alA~aa~~~G~~~~iv~p~~~-----~-------~~k~~~~~~~GA~V~~~~~~ 127 (334)
T 3tbh_A 81 GNTGVSLAHLGAIRGYKVIITMPESM-----S-------LERRCLLRIFGAEVILTPAA 127 (334)
T ss_dssp SHHHHHHHHHHHHHTCEEEEEEETTS-----C-------HHHHHHHHHTTCEEEEECGG
T ss_pred CHHHHHHHHHHHHhCCCEEEEECCCC-----C-------HHHHHHHHHCCCEEEEECCC
Confidence 333344444 4557899887775431 0 11234456677777777653
No 158
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=20.43 E-value=1.1e+02 Score=24.72 Aligned_cols=40 Identities=8% Similarity=0.055 Sum_probs=32.7
Q ss_pred cCCCCeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeC
Q 019498 122 DRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNN 163 (340)
Q Consensus 122 ~~~~~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN 163 (340)
.+++..++++.--|... .+.+++..|...+.++|.|..|.
T Consensus 108 ~~~~Dvvi~iS~sG~t~--~~~~~~~~ak~~g~~vi~iT~~~ 147 (188)
T 1tk9_A 108 GNEKDVLIGISTSGKSP--NVLEALKKAKELNMLCLGLSGKG 147 (188)
T ss_dssp CCTTCEEEEECSSSCCH--HHHHHHHHHHHTTCEEEEEEEGG
T ss_pred CCCCCEEEEEeCCCCCH--HHHHHHHHHHHCCCEEEEEeCCC
Confidence 45777888888888875 58899999999999999887763
No 159
>3p45_A Caspase-6; protease, huntington'S disease, physio PH, competitive inhibition, hydrolase; 2.53A {Homo sapiens}
Probab=20.43 E-value=1.2e+02 Score=25.26 Aligned_cols=48 Identities=8% Similarity=0.061 Sum_probs=33.8
Q ss_pred cchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEE
Q 019498 178 DGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 226 (340)
Q Consensus 178 ~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t 226 (340)
..+.+.++.+|+.+...+--+..++...++++... ...+..+++.+..
T Consensus 72 ~~L~~~F~~LGF~V~~~~dlt~~em~~~l~~~~~~-dh~~~dc~vvvil 119 (179)
T 3p45_A 72 DNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTV-SHADADCFVCVFL 119 (179)
T ss_dssp HHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHTS-CCTTBSCEEEEEE
T ss_pred HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHhhh-hcCCCCEEEEEEe
Confidence 45788899999999998878889999999886421 1123345555543
No 160
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=20.30 E-value=2.1e+02 Score=26.02 Aligned_cols=61 Identities=11% Similarity=0.168 Sum_probs=37.1
Q ss_pred CCCeEEEEECCcccCcchHHHHHHHHHhC-CCCEEEEEEeCCccccccccCccCccchhhhhhhcCceEEEEc
Q 019498 124 KDACAVTYFGDGGTSEGDFHAALNFSAVT-EAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVD 195 (340)
Q Consensus 124 ~~~~vv~~~GDG~~~~G~~~Eal~~A~~~-~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~Vd 195 (340)
-+...|+++||+..+. +.+--+..++.+ +..+.+++ |..- ...+++.+.++..|..+...+
T Consensus 149 l~glkva~vGD~~~~r-va~Sl~~~~~~~~G~~v~~~~---------P~~~-~~~~~~~~~~~~~g~~~~~~~ 210 (306)
T 4ekn_B 149 IDGIKIAFVGDLKYGR-TVHSLVYALSLFENVEMYFVS---------PKEL-RLPKDIIEDLKAKNIKFYEKE 210 (306)
T ss_dssp STTCEEEEESCTTTCH-HHHHHHHHHHTSSSCEEEEEC---------CGGG-CCCHHHHHHHHHTTCCEEEES
T ss_pred cCCCEEEEEcCCCCCc-HHHHHHHHHHhcCCCEEEEEC---------Cccc-ccCHHHHHHHHHcCCEEEEEc
Confidence 4678999999997642 444445555667 77666554 2221 123356666677787766555
No 161
>3sir_A Caspase; hydrolase; 2.68A {Drosophila melanogaster} PDB: 3sip_A
Probab=20.28 E-value=2.6e+02 Score=24.45 Aligned_cols=55 Identities=4% Similarity=0.046 Sum_probs=34.8
Q ss_pred EEEEEEeCCcccc---ccccCccCccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHH
Q 019498 156 VIFICRNNGWAIS---TPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAR 210 (340)
Q Consensus 156 vi~vv~nN~~~~~---~~~~~~~~~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~ 210 (340)
+.+||+|-.|... .+.........+.+.++.+|+.+....--+..++.+++++..
T Consensus 22 ~aLIInn~~f~~~~l~~R~G~~~D~~~L~~~f~~LGF~V~~~~dlt~~em~~~l~~~~ 79 (259)
T 3sir_A 22 MALIFNHEHFEVPTLKSRAGTNVDCENLTRVLKQLDFEVTVYKDCRYKDILRTIEYSA 79 (259)
T ss_dssp EEEEEEECCC-----------CCHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHHHH
T ss_pred EEEEEeccccCCCCCCCCCCcHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH
Confidence 4566666566532 111111123457888999999999888778899999998754
No 162
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=20.14 E-value=1e+02 Score=25.02 Aligned_cols=35 Identities=17% Similarity=0.136 Sum_probs=26.7
Q ss_pred CeEEEEECCcccCcchHHHHHHHHHhCCCCEEEEEEeC
Q 019498 126 ACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNN 163 (340)
Q Consensus 126 ~~vv~~~GDG~~~~G~~~Eal~~A~~~~Lpvi~vv~nN 163 (340)
..||+.++ ..+.|..+| +.+|...+.||+.+..++
T Consensus 79 D~vva~~~--~~d~Gt~~E-iGyA~algKPVi~l~~~~ 113 (165)
T 2khz_A 79 DVVVAEVT--QPSLGVGYE-LGRAVALGKPILCLFRPQ 113 (165)
T ss_dssp SEEEEECS--SCCHHHHHH-HHHHHHTCSSEEEEECTT
T ss_pred CEEEEECC--CCCCCHHHH-HHHHHHCCCEEEEEEcCC
Confidence 35555555 667888888 889999999999886554
No 163
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=20.14 E-value=4e+02 Score=22.59 Aligned_cols=81 Identities=15% Similarity=0.076 Sum_probs=46.5
Q ss_pred CeEEEEECCcccCcchHHHHHHHHHhCC-C--CEEEEEEeCCccccccccCccCccchhhhhhhcCceEEEEcCC---CH
Q 019498 126 ACAVTYFGDGGTSEGDFHAALNFSAVTE-A--PVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN---DA 199 (340)
Q Consensus 126 ~~vv~~~GDG~~~~G~~~Eal~~A~~~~-L--pvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~---d~ 199 (340)
+++|.+.|-| ...++|.-+...+ + .|+.|+.|+. .....++|+.+|+|+..++-. +.
T Consensus 4 riavl~Sg~G-----snl~ali~~~~~~~l~~eI~~Visn~~------------~a~v~~~A~~~gIp~~~~~~~~~~~r 66 (211)
T 3p9x_A 4 RVAIFASGSG-----TNAEAIIQSQKAGQLPCEVALLITDKP------------GAKVVERVKVHEIPVCALDPKTYPSK 66 (211)
T ss_dssp EEEEECCTTC-----HHHHHHHHHHHTTCCSSEEEEEEESCS------------SSHHHHHHHTTTCCEEECCGGGSSSH
T ss_pred EEEEEEeCCc-----hHHHHHHHHHHcCCCCcEEEEEEECCC------------CcHHHHHHHHcCCCEEEeChhhcCch
Confidence 4555556644 4567777666543 5 4677777652 123567899999999877532 33
Q ss_pred HHHHHHHHHHHHHhHccCCCEEEEEEEe
Q 019498 200 LAIYSAVHAAREMAIGEGRPILIEALTY 227 (340)
Q Consensus 200 ~~v~~a~~~a~~~~r~~~~P~lIe~~t~ 227 (340)
++..+.+.+.++ .-+|=+|.+.-|
T Consensus 67 ~~~d~~~~~~l~----~~~~Dliv~agy 90 (211)
T 3p9x_A 67 EAYEIEVVQQLK----EKQIDFVVLAGY 90 (211)
T ss_dssp HHHHHHHHHHHH----HTTCCEEEESSC
T ss_pred hhhHHHHHHHHH----hcCCCEEEEeCc
Confidence 333334433443 235666665544
No 164
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=20.09 E-value=4.8e+02 Score=23.47 Aligned_cols=42 Identities=21% Similarity=0.128 Sum_probs=24.6
Q ss_pred HHHHH-HHhCCCCEEEEEEeCCccccccccCccCccchhhhhhhcCceEEEEcCC
Q 019498 144 AALNF-SAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN 197 (340)
Q Consensus 144 Eal~~-A~~~~Lpvi~vv~nN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~ 197 (340)
-++.. |+..++++++|+-.+- + ..-.+..++||..++.+++.
T Consensus 91 ~alA~aa~~~G~~~~iv~p~~~-----~-------~~k~~~~~~~GA~V~~~~~~ 133 (343)
T 2pqm_A 91 IALCQAGAVFGYRVNIAMPSTM-----S-------VERQMIMKAFGAELILTEGK 133 (343)
T ss_dssp HHHHHHHHHHTCCEEEEEETTS-----C-------HHHHHHHHHTTCEEEEECGG
T ss_pred HHHHHHHHHcCCCEEEEECCCC-----C-------HHHHHHHHHCCCEEEEECCC
Confidence 34444 4568899988886541 0 11233456677777777653
No 165
>3h11_A CAsp8 and FADD-like apoptosis regulator; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} PDB: 3h13_A
Probab=20.05 E-value=2.4e+02 Score=25.05 Aligned_cols=50 Identities=8% Similarity=-0.104 Sum_probs=35.3
Q ss_pred ccchhhhhhhcCceEEEEcCCCHHHHHHHHHHHHHHhHccCCCEEEEEEE
Q 019498 177 SDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 226 (340)
Q Consensus 177 ~~~~~~~a~a~G~~~~~VdG~d~~~v~~a~~~a~~~~r~~~~P~lIe~~t 226 (340)
...+.+.++.+|+.+...+--+..++...+++..+..-..+..+++-+..
T Consensus 56 ~~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~~~~~~dh~~~d~~v~~il 105 (272)
T 3h11_A 56 TELLRDTFTSLGYEVQKFLHLSMHGISQILGQFACMPEHRDYDSFVCVLV 105 (272)
T ss_dssp CSHHHHHHHHHTEEEEEEESCBHHHHHHHHHHHHTCGGGGGCSEEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEeeCCCHHHHHHHHHHHHhccccCCCCEEEEEEE
Confidence 45688999999999998887788999999887543111234556655544
Done!