Query 019500
Match_columns 340
No_of_seqs 274 out of 2068
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 17:04:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019500.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019500hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fp4_A Succinyl-COA ligase [GD 100.0 6E-72 2.1E-76 535.9 33.5 299 26-338 1-304 (305)
2 2yv2_A Succinyl-COA synthetase 100.0 7.5E-72 2.5E-76 533.4 29.9 289 34-334 6-296 (297)
3 1oi7_A Succinyl-COA synthetase 100.0 1E-71 3.6E-76 530.3 30.4 285 37-333 2-287 (288)
4 2yv1_A Succinyl-COA ligase [AD 100.0 1.3E-71 4.5E-76 531.0 28.2 288 33-334 5-293 (294)
5 2nu8_A Succinyl-COA ligase [AD 100.0 6.9E-70 2.4E-74 517.7 31.8 285 37-333 2-287 (288)
6 3mwd_B ATP-citrate synthase; A 100.0 1.7E-64 5.8E-69 488.5 26.8 283 37-336 5-318 (334)
7 2csu_A 457AA long hypothetical 100.0 4.8E-64 1.6E-68 505.1 22.3 270 33-331 1-285 (457)
8 3pff_A ATP-citrate synthase; p 100.0 2.4E-60 8.1E-65 502.7 27.0 286 37-336 491-804 (829)
9 3dmy_A Protein FDRA; predicted 100.0 2.2E-47 7.7E-52 384.3 18.5 209 84-334 20-236 (480)
10 1iuk_A Hypothetical protein TT 99.9 1E-25 3.6E-30 192.2 6.8 123 34-166 6-132 (140)
11 2duw_A Putative COA-binding pr 99.9 3E-25 1E-29 190.4 9.6 124 33-166 5-132 (145)
12 2d59_A Hypothetical protein PH 99.9 1E-24 3.4E-29 186.8 9.6 121 34-166 15-139 (144)
13 1y81_A Conserved hypothetical 99.9 1.6E-24 5.5E-29 184.5 10.6 120 35-166 9-131 (138)
14 3ff4_A Uncharacterized protein 99.9 1.2E-24 4.2E-29 181.7 9.0 112 39-164 3-117 (122)
15 3ijp_A DHPR, dihydrodipicolina 99.4 2.9E-12 1E-16 121.2 11.8 120 39-163 18-150 (288)
16 4f3y_A DHPR, dihydrodipicolina 99.3 1.2E-11 4.2E-16 116.2 11.0 117 42-163 7-135 (272)
17 1dih_A Dihydrodipicolinate red 99.1 1.1E-10 3.9E-15 109.5 9.1 118 41-163 4-134 (273)
18 3qy9_A DHPR, dihydrodipicolina 99.1 1E-10 3.5E-15 108.2 8.6 111 42-163 3-114 (243)
19 1p9l_A Dihydrodipicolinate red 99.0 1.3E-09 4.5E-14 100.8 12.5 105 43-162 1-109 (245)
20 3keo_A Redox-sensing transcrip 99.0 4.1E-10 1.4E-14 102.1 6.5 109 23-132 62-181 (212)
21 3o9z_A Lipopolysaccaride biosy 98.8 4.2E-08 1.4E-12 93.2 12.6 116 42-158 3-131 (312)
22 4fb5_A Probable oxidoreductase 98.8 3.2E-08 1.1E-12 95.0 11.2 123 34-158 15-153 (393)
23 1vm6_A DHPR, dihydrodipicolina 98.7 3.4E-08 1.1E-12 90.2 10.1 103 41-162 11-114 (228)
24 3rc1_A Sugar 3-ketoreductase; 98.7 2.5E-08 8.6E-13 96.0 9.8 128 23-154 10-143 (350)
25 2dc1_A L-aspartate dehydrogena 98.7 4.1E-08 1.4E-12 89.3 10.5 112 44-164 2-116 (236)
26 4ew6_A D-galactose-1-dehydroge 98.7 6.4E-08 2.2E-12 92.5 12.0 113 41-158 24-140 (330)
27 3q2i_A Dehydrogenase; rossmann 98.7 6.4E-08 2.2E-12 92.9 11.5 117 39-158 10-134 (354)
28 3euw_A MYO-inositol dehydrogen 98.7 5.7E-08 1.9E-12 92.8 10.4 115 41-158 3-124 (344)
29 3oa2_A WBPB; oxidoreductase, s 98.7 1.3E-07 4.6E-12 89.9 12.5 116 42-158 3-132 (318)
30 4had_A Probable oxidoreductase 98.7 5.9E-08 2E-12 92.7 10.0 117 40-158 21-145 (350)
31 3db2_A Putative NADPH-dependen 98.7 6.9E-08 2.3E-12 92.7 10.3 116 41-158 4-125 (354)
32 3i23_A Oxidoreductase, GFO/IDH 98.7 4.7E-08 1.6E-12 93.8 9.0 114 42-158 2-124 (349)
33 3e18_A Oxidoreductase; dehydro 98.7 1.1E-07 3.7E-12 91.8 11.4 116 41-158 4-124 (359)
34 2dt5_A AT-rich DNA-binding pro 98.7 2.5E-08 8.4E-13 90.3 6.4 109 21-132 56-173 (211)
35 3evn_A Oxidoreductase, GFO/IDH 98.7 3.1E-07 1E-11 87.3 14.2 116 41-158 4-126 (329)
36 3e9m_A Oxidoreductase, GFO/IDH 98.6 2.4E-07 8.1E-12 88.2 13.1 116 41-158 4-126 (330)
37 3fhl_A Putative oxidoreductase 98.6 1.4E-07 4.7E-12 91.0 11.4 116 41-158 4-124 (362)
38 3kux_A Putative oxidoreductase 98.6 7.9E-08 2.7E-12 92.3 9.6 116 40-158 5-126 (352)
39 4hkt_A Inositol 2-dehydrogenas 98.6 1E-07 3.4E-12 90.6 10.2 114 42-158 3-122 (331)
40 2vt3_A REX, redox-sensing tran 98.6 9.4E-08 3.2E-12 86.7 8.9 110 21-133 61-179 (215)
41 4gqa_A NAD binding oxidoreduct 98.6 1.1E-07 3.8E-12 93.0 10.2 119 39-159 23-156 (412)
42 3ec7_A Putative dehydrogenase; 98.6 9.9E-08 3.4E-12 92.0 9.6 116 41-158 22-147 (357)
43 1lc0_A Biliverdin reductase A; 98.6 2.7E-07 9.3E-12 86.7 12.4 114 41-158 6-124 (294)
44 3moi_A Probable dehydrogenase; 98.6 1.2E-07 4.1E-12 92.3 9.9 114 42-158 2-123 (387)
45 3e82_A Putative oxidoreductase 98.6 1.4E-07 4.8E-12 91.1 10.3 116 40-158 5-126 (364)
46 2p2s_A Putative oxidoreductase 98.6 3.1E-07 1E-11 87.4 12.3 111 42-154 4-120 (336)
47 1zh8_A Oxidoreductase; TM0312, 98.6 1.4E-07 4.8E-12 90.3 9.9 118 39-158 15-141 (340)
48 1tlt_A Putative oxidoreductase 98.6 2.8E-07 9.5E-12 87.1 11.6 110 41-154 4-119 (319)
49 1ydw_A AX110P-like protein; st 98.6 2.1E-07 7.1E-12 89.6 10.8 116 40-158 4-130 (362)
50 3cea_A MYO-inositol 2-dehydrog 98.6 2.5E-07 8.6E-12 88.0 11.3 116 40-158 6-131 (346)
51 3btv_A Galactose/lactose metab 98.6 2.4E-07 8.1E-12 92.0 11.4 113 41-154 19-149 (438)
52 3mz0_A Inositol 2-dehydrogenas 98.6 1.3E-07 4.4E-12 90.4 8.5 115 42-158 2-126 (344)
53 3c1a_A Putative oxidoreductase 98.6 2.9E-07 9.8E-12 86.9 10.8 117 40-158 8-128 (315)
54 3u3x_A Oxidoreductase; structu 98.6 5.2E-07 1.8E-11 87.1 12.8 116 41-158 25-147 (361)
55 3ezy_A Dehydrogenase; structur 98.5 1.6E-07 5.4E-12 89.8 8.9 115 42-158 2-123 (344)
56 3f4l_A Putative oxidoreductase 98.5 1.5E-07 5E-12 90.2 7.9 115 42-158 2-124 (345)
57 3uuw_A Putative oxidoreductase 98.5 1.8E-07 6.2E-12 87.9 8.4 109 42-154 6-120 (308)
58 2glx_A 1,5-anhydro-D-fructose 98.5 5.2E-07 1.8E-11 85.4 11.2 113 43-158 1-121 (332)
59 3gdo_A Uncharacterized oxidore 98.5 2.8E-07 9.5E-12 88.8 9.3 116 41-158 4-124 (358)
60 3ohs_X Trans-1,2-dihydrobenzen 98.5 3.3E-07 1.1E-11 87.2 9.7 115 42-158 2-125 (334)
61 3m2t_A Probable dehydrogenase; 98.5 2.8E-07 9.5E-12 88.9 9.2 116 41-158 4-127 (359)
62 4gmf_A Yersiniabactin biosynth 98.5 1.6E-07 5.4E-12 91.7 7.3 111 41-158 6-127 (372)
63 2ho3_A Oxidoreductase, GFO/IDH 98.5 9.3E-07 3.2E-11 83.7 12.1 113 43-158 2-121 (325)
64 3bio_A Oxidoreductase, GFO/IDH 98.4 3.2E-07 1.1E-11 86.8 8.0 111 41-157 8-124 (304)
65 1f06_A MESO-diaminopimelate D- 98.4 3.2E-07 1.1E-11 87.4 8.1 112 41-158 2-118 (320)
66 3dty_A Oxidoreductase, GFO/IDH 98.4 7.1E-07 2.4E-11 87.2 10.5 116 41-158 11-144 (398)
67 2nvw_A Galactose/lactose metab 98.4 8.6E-07 2.9E-11 89.1 11.1 117 41-158 38-174 (479)
68 1h6d_A Precursor form of gluco 98.4 5.9E-07 2E-11 89.0 9.2 116 40-158 81-209 (433)
69 3v5n_A Oxidoreductase; structu 98.4 8.9E-07 3E-11 87.2 10.2 117 41-159 36-170 (417)
70 4h3v_A Oxidoreductase domain p 98.4 6.6E-07 2.3E-11 85.7 8.8 116 42-158 6-137 (390)
71 2ixa_A Alpha-N-acetylgalactosa 98.4 1.1E-06 3.8E-11 87.1 9.9 117 41-159 19-151 (444)
72 3oqb_A Oxidoreductase; structu 98.3 7.3E-07 2.5E-11 86.3 8.0 119 39-158 3-142 (383)
73 3ip3_A Oxidoreductase, putativ 98.3 1.7E-06 5.8E-11 82.4 9.0 109 42-153 2-120 (337)
74 2csu_A 457AA long hypothetical 98.3 6.3E-05 2.2E-09 75.1 20.6 250 45-334 152-446 (457)
75 3do5_A HOM, homoserine dehydro 98.1 1.7E-05 5.7E-10 76.2 12.1 158 42-211 2-191 (327)
76 1xea_A Oxidoreductase, GFO/IDH 98.1 6.7E-06 2.3E-10 77.7 8.6 107 43-154 3-117 (323)
77 3upl_A Oxidoreductase; rossman 98.1 4.4E-06 1.5E-10 83.3 7.0 111 40-153 21-160 (446)
78 3mtj_A Homoserine dehydrogenas 97.9 1.4E-05 4.8E-10 79.7 7.9 162 40-211 8-186 (444)
79 1j5p_A Aspartate dehydrogenase 97.9 1.7E-05 5.9E-10 73.4 7.6 108 40-158 10-119 (253)
80 4dll_A 2-hydroxy-3-oxopropiona 97.9 6.1E-05 2.1E-09 71.3 10.7 111 41-156 30-147 (320)
81 3nkl_A UDP-D-quinovosamine 4-d 97.9 3.3E-05 1.1E-09 63.8 7.5 86 41-128 3-97 (141)
82 3doj_A AT3G25530, dehydrogenas 97.8 4E-05 1.4E-09 72.2 8.8 127 25-156 4-138 (310)
83 3ing_A Homoserine dehydrogenas 97.8 7.7E-05 2.6E-09 71.4 10.3 157 41-211 3-192 (325)
84 3pef_A 6-phosphogluconate dehy 97.8 6.3E-05 2.1E-09 69.8 9.4 109 43-156 2-118 (287)
85 3tri_A Pyrroline-5-carboxylate 97.8 0.00012 4.1E-09 68.2 10.7 92 43-138 4-105 (280)
86 3c8m_A Homoserine dehydrogenas 97.8 8E-05 2.7E-09 71.3 9.7 159 41-211 5-196 (331)
87 3dmy_A Protein FDRA; predicted 97.7 0.001 3.6E-08 66.8 16.9 250 44-333 114-412 (480)
88 4e21_A 6-phosphogluconate dehy 97.7 0.00011 3.7E-09 71.2 9.1 111 42-157 22-139 (358)
89 3qsg_A NAD-binding phosphogluc 97.7 7.1E-05 2.4E-09 70.7 7.7 115 38-157 20-143 (312)
90 3qha_A Putative oxidoreductase 97.7 0.00021 7.1E-09 66.8 10.6 108 43-156 16-128 (296)
91 3ufx_B Succinyl-COA synthetase 97.6 0.00033 1.1E-08 68.8 11.5 124 179-332 246-373 (397)
92 4gbj_A 6-phosphogluconate dehy 97.6 0.00044 1.5E-08 65.0 11.9 110 44-159 7-124 (297)
93 3l6d_A Putative oxidoreductase 97.6 0.00014 4.7E-09 68.5 8.3 107 43-156 10-124 (306)
94 2h78_A Hibadh, 3-hydroxyisobut 97.6 0.00018 6.3E-09 66.9 9.1 107 42-155 3-119 (302)
95 3abi_A Putative uncharacterize 97.6 6.1E-05 2.1E-09 72.6 5.8 112 36-155 10-129 (365)
96 1yb4_A Tartronic semialdehyde 97.6 0.00037 1.3E-08 64.3 10.6 107 43-156 4-119 (295)
97 2rcy_A Pyrroline carboxylate r 97.6 0.00016 5.6E-09 65.6 8.0 87 44-137 6-97 (262)
98 3d1l_A Putative NADP oxidoredu 97.5 0.00014 4.7E-09 66.5 7.1 93 43-138 11-109 (266)
99 3pdu_A 3-hydroxyisobutyrate de 97.5 0.0002 6.8E-09 66.3 8.0 108 44-156 3-118 (287)
100 1vpd_A Tartronate semialdehyde 97.5 0.00034 1.2E-08 64.8 9.5 108 43-157 6-123 (299)
101 3b1f_A Putative prephenate deh 97.5 0.00026 8.7E-09 65.5 8.5 109 43-156 7-124 (290)
102 2ahr_A Putative pyrroline carb 97.5 0.00013 4.4E-09 66.4 6.2 91 42-138 3-97 (259)
103 3ggo_A Prephenate dehydrogenas 97.5 0.00052 1.8E-08 65.0 10.6 98 42-145 33-141 (314)
104 1ebf_A Homoserine dehydrogenas 97.4 0.00026 8.8E-09 68.6 8.1 160 40-211 2-197 (358)
105 1i36_A Conserved hypothetical 97.4 0.00045 1.5E-08 62.8 9.2 100 44-151 2-106 (264)
106 3cky_A 2-hydroxymethyl glutara 97.4 0.0006 2.1E-08 63.1 9.8 108 42-156 4-121 (301)
107 2uyy_A N-PAC protein; long-cha 97.4 0.00041 1.4E-08 65.0 8.5 109 43-156 31-147 (316)
108 2czc_A Glyceraldehyde-3-phosph 97.3 0.00044 1.5E-08 66.1 8.0 88 42-134 2-112 (334)
109 3fr7_A Putative ketol-acid red 97.3 0.00023 7.7E-09 71.7 6.1 124 35-163 48-186 (525)
110 2gf2_A Hibadh, 3-hydroxyisobut 97.3 0.00058 2E-08 63.1 8.6 107 44-155 2-116 (296)
111 2p4q_A 6-phosphogluconate dehy 97.3 0.00061 2.1E-08 68.7 9.3 110 43-156 11-132 (497)
112 3ic5_A Putative saccharopine d 97.3 0.00039 1.3E-08 54.5 6.1 86 42-132 5-101 (118)
113 2ozp_A N-acetyl-gamma-glutamyl 97.3 0.0006 2E-08 65.6 8.4 90 42-135 4-103 (345)
114 4huj_A Uncharacterized protein 97.3 0.00043 1.5E-08 61.9 6.8 92 41-135 22-117 (220)
115 1nvm_B Acetaldehyde dehydrogen 97.3 0.00054 1.9E-08 65.1 7.7 90 41-132 3-105 (312)
116 3g0o_A 3-hydroxyisobutyrate de 97.2 0.0004 1.4E-08 65.0 6.6 109 41-156 6-125 (303)
117 2cvz_A Dehydrogenase, 3-hydrox 97.2 0.00096 3.3E-08 61.2 8.9 106 44-156 3-113 (289)
118 3obb_A Probable 3-hydroxyisobu 97.2 0.0011 3.9E-08 62.4 9.5 107 44-155 5-119 (300)
119 2iz1_A 6-phosphogluconate dehy 97.2 0.00088 3E-08 67.0 9.1 109 44-156 7-126 (474)
120 2zyd_A 6-phosphogluconate dehy 97.2 0.00059 2E-08 68.5 7.8 109 44-156 17-136 (480)
121 3ktd_A Prephenate dehydrogenas 97.2 0.00061 2.1E-08 65.5 7.6 107 43-156 9-122 (341)
122 2pgd_A 6-phosphogluconate dehy 97.2 0.0013 4.4E-08 65.9 10.1 109 44-156 4-124 (482)
123 4ezb_A Uncharacterized conserv 97.2 0.00088 3E-08 63.4 8.4 107 43-156 25-144 (317)
124 1z82_A Glycerol-3-phosphate de 97.2 0.00024 8.3E-09 67.3 4.4 90 43-138 15-118 (335)
125 3dr3_A N-acetyl-gamma-glutamyl 97.2 0.00095 3.2E-08 64.2 8.5 92 41-135 3-110 (337)
126 2pv7_A T-protein [includes: ch 97.1 0.0021 7.1E-08 60.1 9.9 96 44-156 23-119 (298)
127 2ejw_A HDH, homoserine dehydro 97.1 0.00061 2.1E-08 65.4 6.1 153 42-211 3-170 (332)
128 2f1k_A Prephenate dehydrogenas 97.1 0.0016 5.5E-08 59.6 8.7 94 44-144 2-103 (279)
129 2z2v_A Hypothetical protein PH 97.1 0.00085 2.9E-08 65.0 7.1 108 39-155 13-129 (365)
130 4gwg_A 6-phosphogluconate dehy 97.1 0.0016 5.5E-08 65.5 9.2 111 43-157 5-127 (484)
131 2ep5_A 350AA long hypothetical 97.0 0.0013 4.3E-08 63.4 8.0 90 41-134 3-111 (350)
132 2fp4_B Succinyl-COA ligase [GD 97.0 0.0073 2.5E-07 59.2 13.5 123 179-331 262-390 (395)
133 2g5c_A Prephenate dehydrogenas 97.0 0.003 1E-07 57.9 10.1 98 44-146 3-110 (281)
134 2izz_A Pyrroline-5-carboxylate 97.0 0.0017 5.7E-08 61.4 8.6 92 43-138 23-125 (322)
135 1b7g_O Protein (glyceraldehyde 97.0 0.0011 3.7E-08 63.7 7.3 87 43-133 2-110 (340)
136 1pgj_A 6PGDH, 6-PGDH, 6-phosph 97.0 0.0016 5.4E-08 65.3 8.7 109 44-156 3-126 (478)
137 3ba1_A HPPR, hydroxyphenylpyru 97.0 0.0012 4.2E-08 63.2 7.1 104 44-156 166-274 (333)
138 1yqg_A Pyrroline-5-carboxylate 97.0 0.00067 2.3E-08 61.5 5.1 87 44-136 2-93 (263)
139 2py6_A Methyltransferase FKBM; 96.9 0.00018 6.1E-09 70.8 0.9 87 40-130 50-140 (409)
140 3gt0_A Pyrroline-5-carboxylate 96.9 0.00085 2.9E-08 60.7 5.4 91 44-138 4-104 (247)
141 1cf2_P Protein (glyceraldehyde 96.9 0.0023 7.9E-08 61.3 8.6 86 43-132 2-110 (337)
142 3pid_A UDP-glucose 6-dehydroge 96.9 0.0044 1.5E-07 61.5 10.7 110 42-160 36-179 (432)
143 3c24_A Putative oxidoreductase 96.9 0.0012 4E-08 61.1 6.2 88 43-134 12-104 (286)
144 3k96_A Glycerol-3-phosphate de 96.9 0.0017 5.9E-08 62.6 7.2 92 42-137 29-139 (356)
145 2nu8_B SCS-beta, succinyl-COA 96.8 0.02 6.7E-07 55.9 14.4 123 179-332 255-384 (388)
146 4dgs_A Dehydrogenase; structur 96.8 0.0035 1.2E-07 60.3 8.8 98 42-146 171-272 (340)
147 1t4b_A Aspartate-semialdehyde 96.8 0.0052 1.8E-07 59.6 10.1 89 43-134 2-101 (367)
148 4dpl_A Malonyl-COA/succinyl-CO 96.8 0.003 1E-07 61.1 8.1 92 40-135 5-114 (359)
149 4dpk_A Malonyl-COA/succinyl-CO 96.8 0.003 1E-07 61.1 8.1 92 40-135 5-114 (359)
150 1txg_A Glycerol-3-phosphate de 96.7 0.0017 5.9E-08 60.7 6.0 87 44-134 2-107 (335)
151 3e5r_O PP38, glyceraldehyde-3- 96.7 0.0017 5.7E-08 62.4 6.0 86 43-129 4-123 (337)
152 3uw3_A Aspartate-semialdehyde 96.7 0.0048 1.6E-07 60.2 9.1 116 40-161 2-140 (377)
153 1np3_A Ketol-acid reductoisome 96.7 0.0017 5.8E-08 62.0 5.8 87 44-135 18-110 (338)
154 1xyg_A Putative N-acetyl-gamma 96.7 0.0033 1.1E-07 60.8 7.7 90 41-135 15-116 (359)
155 1jay_A Coenzyme F420H2:NADP+ o 96.7 0.0024 8.3E-08 55.9 6.1 88 44-135 2-101 (212)
156 3dtt_A NADP oxidoreductase; st 96.7 0.0023 7.8E-08 58.0 6.0 89 41-133 18-126 (245)
157 3hsk_A Aspartate-semialdehyde 96.6 0.0078 2.7E-07 58.7 10.0 91 41-135 18-128 (381)
158 1evy_A Glycerol-3-phosphate de 96.6 0.0026 8.9E-08 60.7 6.5 90 44-138 17-131 (366)
159 1ys4_A Aspartate-semialdehyde 96.6 0.0053 1.8E-07 59.0 8.4 90 43-134 9-117 (354)
160 1u8f_O GAPDH, glyceraldehyde-3 96.6 0.0019 6.6E-08 61.9 5.2 90 42-133 3-124 (335)
161 3pzr_A Aspartate-semialdehyde 96.6 0.011 3.8E-07 57.4 10.6 112 43-160 1-135 (370)
162 2nqt_A N-acetyl-gamma-glutamyl 96.6 0.0058 2E-07 59.0 8.5 89 42-135 9-114 (352)
163 2g0t_A Conserved hypothetical 96.6 0.0078 2.7E-07 58.1 9.3 115 36-157 17-150 (350)
164 2ew2_A 2-dehydropantoate 2-red 96.5 0.0055 1.9E-07 56.4 7.6 91 43-135 4-112 (316)
165 2raf_A Putative dinucleotide-b 96.5 0.016 5.4E-07 51.2 10.3 75 42-135 19-94 (209)
166 3pwk_A Aspartate-semialdehyde 96.5 0.0081 2.8E-07 58.3 8.8 90 42-135 2-99 (366)
167 3gvx_A Glycerate dehydrogenase 96.4 0.0044 1.5E-07 58.2 6.7 61 43-109 123-183 (290)
168 3dhn_A NAD-dependent epimerase 96.4 0.0091 3.1E-07 52.2 8.3 88 42-132 4-112 (227)
169 4ina_A Saccharopine dehydrogen 96.4 0.0033 1.1E-07 61.5 5.7 83 43-127 2-104 (405)
170 3dqp_A Oxidoreductase YLBE; al 96.4 0.013 4.3E-07 51.2 8.9 86 44-132 2-106 (219)
171 1vkn_A N-acetyl-gamma-glutamyl 96.3 0.0095 3.2E-07 57.5 8.4 91 40-135 11-111 (351)
172 4ea9_A Perosamine N-acetyltran 96.3 0.014 4.8E-07 51.7 8.8 86 44-131 14-103 (220)
173 2hjs_A USG-1 protein homolog; 96.3 0.0098 3.4E-07 57.0 8.2 89 43-135 7-103 (340)
174 1yj8_A Glycerol-3-phosphate de 96.2 0.0056 1.9E-07 58.8 6.3 90 43-136 22-146 (375)
175 2r00_A Aspartate-semialdehyde 96.2 0.012 4E-07 56.3 8.4 91 42-134 3-99 (336)
176 2w2k_A D-mandelate dehydrogena 96.2 0.012 4.1E-07 56.4 8.4 108 43-156 164-279 (348)
177 3e8x_A Putative NAD-dependent 96.2 0.018 6.3E-07 50.8 8.9 89 41-132 20-131 (236)
178 3gg2_A Sugar dehydrogenase, UD 96.2 0.024 8.3E-07 56.2 10.6 96 43-144 3-134 (450)
179 3pp8_A Glyoxylate/hydroxypyruv 96.1 0.0071 2.4E-07 57.4 6.1 67 44-116 141-211 (315)
180 1qp8_A Formate dehydrogenase; 96.1 0.011 3.7E-07 55.7 7.2 68 42-116 124-192 (303)
181 2vns_A Metalloreductase steap3 96.1 0.0045 1.5E-07 55.0 4.2 89 42-137 28-121 (215)
182 1f0y_A HCDH, L-3-hydroxyacyl-C 96.1 0.0094 3.2E-07 55.4 6.6 90 42-137 15-142 (302)
183 4e12_A Diketoreductase; oxidor 96.0 0.0069 2.4E-07 56.0 5.6 89 44-138 6-128 (283)
184 1mv8_A GMD, GDP-mannose 6-dehy 96.0 0.026 9E-07 55.5 9.8 88 44-135 2-126 (436)
185 2y0c_A BCEC, UDP-glucose dehyd 95.9 0.027 9.3E-07 56.3 9.9 101 41-145 7-141 (478)
186 1ks9_A KPA reductase;, 2-dehyd 95.9 0.033 1.1E-06 50.5 9.6 88 44-136 2-102 (291)
187 1sc6_A PGDH, D-3-phosphoglycer 95.9 0.021 7E-07 56.1 8.6 104 42-152 145-252 (404)
188 3r6d_A NAD-dependent epimerase 95.9 0.016 5.5E-07 50.6 7.1 84 45-132 8-108 (221)
189 3dfu_A Uncharacterized protein 95.9 0.024 8.2E-07 51.6 8.5 73 40-134 4-77 (232)
190 3ew7_A LMO0794 protein; Q8Y8U8 95.9 0.012 4.2E-07 50.8 6.3 86 44-132 2-103 (221)
191 3e48_A Putative nucleoside-dip 95.9 0.019 6.6E-07 52.1 7.8 86 44-132 2-106 (289)
192 3hn2_A 2-dehydropantoate 2-red 95.9 0.04 1.4E-06 51.4 10.1 88 44-136 4-108 (312)
193 1x0v_A GPD-C, GPDH-C, glycerol 95.9 0.018 6.1E-07 54.4 7.7 89 43-135 9-128 (354)
194 1bg6_A N-(1-D-carboxylethyl)-L 95.9 0.018 6.1E-07 54.2 7.7 88 43-134 5-111 (359)
195 3i83_A 2-dehydropantoate 2-red 95.9 0.015 5.2E-07 54.6 7.2 110 43-161 3-131 (320)
196 3hwr_A 2-dehydropantoate 2-red 95.8 0.02 7E-07 53.7 8.0 92 42-137 19-126 (318)
197 1hdo_A Biliverdin IX beta redu 95.8 0.029 1E-06 47.7 8.4 87 43-132 4-111 (206)
198 2g1u_A Hypothetical protein TM 95.8 0.064 2.2E-06 44.6 10.1 90 43-134 20-121 (155)
199 3ruf_A WBGU; rossmann fold, UD 95.8 0.0099 3.4E-07 55.5 5.5 90 41-132 24-151 (351)
200 1lss_A TRK system potassium up 95.8 0.04 1.4E-06 44.0 8.5 91 42-134 4-105 (140)
201 4a7p_A UDP-glucose dehydrogena 95.8 0.055 1.9E-06 53.7 11.0 102 41-146 7-143 (446)
202 4g2n_A D-isomer specific 2-hyd 95.7 0.025 8.5E-07 54.4 8.1 63 43-109 174-237 (345)
203 1dlj_A UDP-glucose dehydrogena 95.7 0.027 9.4E-07 54.8 8.6 98 44-146 2-131 (402)
204 2q3e_A UDP-glucose 6-dehydroge 95.7 0.042 1.5E-06 54.5 10.1 100 43-146 6-145 (467)
205 3m2p_A UDP-N-acetylglucosamine 95.7 0.043 1.5E-06 50.4 9.5 86 43-132 3-109 (311)
206 2axq_A Saccharopine dehydrogen 95.7 0.035 1.2E-06 55.5 9.3 106 42-155 23-140 (467)
207 1dxy_A D-2-hydroxyisocaproate 95.7 0.03 1E-06 53.4 8.5 103 44-153 147-253 (333)
208 1mx3_A CTBP1, C-terminal bindi 95.7 0.0096 3.3E-07 57.3 5.0 106 42-153 168-279 (347)
209 2ph5_A Homospermidine synthase 95.6 0.035 1.2E-06 55.6 8.8 80 43-126 14-110 (480)
210 4fgw_A Glycerol-3-phosphate de 95.5 0.021 7.2E-07 55.9 6.8 93 40-135 32-155 (391)
211 2x5j_O E4PDH, D-erythrose-4-ph 95.5 0.024 8.1E-07 54.4 7.0 90 43-133 3-126 (339)
212 3ulk_A Ketol-acid reductoisome 95.5 0.0083 2.8E-07 59.6 3.8 119 35-163 32-160 (491)
213 3jtm_A Formate dehydrogenase, 95.5 0.028 9.7E-07 54.1 7.5 64 42-109 164-230 (351)
214 2ekl_A D-3-phosphoglycerate de 95.4 0.024 8.3E-07 53.5 6.9 64 42-110 142-207 (313)
215 3tz6_A Aspartate-semialdehyde 95.4 0.048 1.6E-06 52.4 9.0 89 43-134 2-97 (344)
216 1gdh_A D-glycerate dehydrogena 95.4 0.017 5.9E-07 54.7 5.6 64 42-110 146-213 (320)
217 4id9_A Short-chain dehydrogena 95.4 0.038 1.3E-06 51.4 7.9 90 41-132 18-126 (347)
218 2i76_A Hypothetical protein; N 95.3 0.0018 6E-08 59.8 -1.6 88 44-137 4-95 (276)
219 2nac_A NAD-dependent formate d 95.3 0.024 8.4E-07 55.4 6.5 64 42-109 191-257 (393)
220 3k5p_A D-3-phosphoglycerate de 95.3 0.073 2.5E-06 52.4 9.9 105 42-153 156-264 (416)
221 2qyt_A 2-dehydropantoate 2-red 95.3 0.018 6.1E-07 53.2 5.2 90 42-136 8-122 (317)
222 2yq5_A D-isomer specific 2-hyd 95.3 0.028 9.6E-07 54.0 6.7 62 43-109 149-210 (343)
223 2cuk_A Glycerate dehydrogenase 95.3 0.026 8.8E-07 53.3 6.3 96 42-146 144-243 (311)
224 1xdw_A NAD+-dependent (R)-2-hy 95.2 0.028 9.6E-07 53.5 6.6 62 44-110 148-209 (331)
225 3qvo_A NMRA family protein; st 95.2 0.049 1.7E-06 48.2 7.8 88 42-132 23-125 (236)
226 2yjz_A Metalloreductase steap4 94.2 0.0033 1.1E-07 55.6 0.0 87 43-135 20-109 (201)
227 2o3j_A UDP-glucose 6-dehydroge 95.2 0.11 3.7E-06 51.9 11.0 98 43-146 10-149 (481)
228 2x4g_A Nucleoside-diphosphate- 95.2 0.063 2.2E-06 49.6 8.7 88 43-132 14-126 (342)
229 3evt_A Phosphoglycerate dehydr 95.2 0.027 9.3E-07 53.6 6.2 64 42-109 137-201 (324)
230 2g76_A 3-PGDH, D-3-phosphoglyc 95.1 0.032 1.1E-06 53.3 6.7 104 42-152 165-274 (335)
231 3cmc_O GAPDH, glyceraldehyde-3 95.1 0.016 5.5E-07 55.5 4.6 87 42-129 1-118 (334)
232 1ff9_A Saccharopine reductase; 95.1 0.053 1.8E-06 53.8 8.4 104 44-155 5-120 (450)
233 3oet_A Erythronate-4-phosphate 95.1 0.028 9.4E-07 54.9 6.1 61 44-110 121-181 (381)
234 2wm3_A NMRA-like family domain 95.1 0.099 3.4E-06 47.6 9.7 88 43-132 6-115 (299)
235 2d0i_A Dehydrogenase; structur 95.1 0.028 9.6E-07 53.5 6.1 108 42-158 146-260 (333)
236 3d4o_A Dipicolinate synthase s 95.1 0.013 4.3E-07 54.6 3.5 114 42-165 155-274 (293)
237 2rir_A Dipicolinate synthase, 95.1 0.0089 3E-07 55.8 2.5 114 42-165 157-276 (300)
238 2d5c_A AROE, shikimate 5-dehyd 95.0 0.0098 3.4E-07 54.3 2.6 101 44-155 118-226 (263)
239 1qyc_A Phenylcoumaran benzylic 95.0 0.096 3.3E-06 47.7 9.3 85 44-131 6-112 (308)
240 2dbq_A Glyoxylate reductase; D 95.0 0.032 1.1E-06 53.1 6.2 64 43-111 151-216 (334)
241 2obn_A Hypothetical protein; s 95.0 0.095 3.3E-06 50.4 9.4 158 45-215 10-191 (349)
242 2pi1_A D-lactate dehydrogenase 94.9 0.045 1.6E-06 52.2 7.1 103 43-153 142-250 (334)
243 2pk3_A GDP-6-deoxy-D-LYXO-4-he 94.9 0.05 1.7E-06 49.9 7.2 92 39-132 9-126 (321)
244 2d2i_A Glyceraldehyde 3-phosph 94.9 0.061 2.1E-06 52.4 8.0 89 43-132 3-124 (380)
245 1wwk_A Phosphoglycerate dehydr 94.9 0.037 1.3E-06 52.1 6.3 63 43-110 143-207 (307)
246 3cps_A Glyceraldehyde 3-phosph 94.9 0.024 8.3E-07 54.7 5.0 90 42-132 17-138 (354)
247 3b1j_A Glyceraldehyde 3-phosph 94.9 0.077 2.6E-06 50.8 8.5 89 43-132 3-124 (339)
248 2gcg_A Glyoxylate reductase/hy 94.8 0.027 9.1E-07 53.5 5.2 64 42-110 155-221 (330)
249 2bka_A CC3, TAT-interacting pr 94.8 0.16 5.4E-06 44.5 10.0 87 43-132 19-132 (242)
250 1rm4_O Glyceraldehyde 3-phosph 94.8 0.054 1.8E-06 51.9 7.2 91 42-135 1-126 (337)
251 4egb_A DTDP-glucose 4,6-dehydr 94.8 0.058 2E-06 50.1 7.3 93 39-132 21-149 (346)
252 2dpo_A L-gulonate 3-dehydrogen 94.8 0.031 1.1E-06 53.0 5.5 91 43-137 7-129 (319)
253 2q1s_A Putative nucleotide sug 94.8 0.058 2E-06 51.1 7.4 89 42-132 32-151 (377)
254 1j4a_A D-LDH, D-lactate dehydr 94.8 0.043 1.5E-06 52.3 6.4 63 43-110 147-210 (333)
255 2gas_A Isoflavone reductase; N 94.7 0.13 4.4E-06 46.7 9.4 83 44-128 4-109 (307)
256 2j6i_A Formate dehydrogenase; 94.7 0.039 1.3E-06 53.3 6.0 65 42-110 164-232 (364)
257 3h2s_A Putative NADH-flavin re 94.7 0.023 7.8E-07 49.4 4.0 29 44-72 2-30 (224)
258 1r0k_A 1-deoxy-D-xylulose 5-ph 94.7 0.074 2.5E-06 51.9 7.9 110 42-155 4-147 (388)
259 3c1o_A Eugenol synthase; pheny 94.7 0.13 4.6E-06 47.1 9.4 84 43-128 5-110 (321)
260 3c85_A Putative glutathione-re 94.6 0.043 1.5E-06 46.7 5.4 85 44-131 41-139 (183)
261 1qyd_A Pinoresinol-lariciresin 94.6 0.16 5.3E-06 46.3 9.6 84 43-128 5-113 (313)
262 3a06_A 1-deoxy-D-xylulose 5-ph 94.6 0.14 4.7E-06 49.7 9.4 106 43-155 4-139 (376)
263 2c5a_A GDP-mannose-3', 5'-epim 94.5 0.18 6.2E-06 47.7 10.3 90 41-132 28-145 (379)
264 2hmt_A YUAA protein; RCK, KTN, 94.5 0.058 2E-06 43.2 5.8 88 44-133 8-106 (144)
265 3gg9_A D-3-phosphoglycerate de 94.5 0.017 5.9E-07 55.6 2.9 65 42-110 160-226 (352)
266 2zcu_A Uncharacterized oxidore 94.4 0.064 2.2E-06 48.2 6.5 85 45-132 2-104 (286)
267 3g17_A Similar to 2-dehydropan 94.4 0.024 8.3E-07 52.5 3.7 93 43-138 3-103 (294)
268 1xgk_A Nitrogen metabolite rep 94.4 0.13 4.4E-06 48.7 8.9 88 44-133 7-114 (352)
269 3ego_A Probable 2-dehydropanto 94.3 0.046 1.6E-06 51.1 5.5 90 43-137 3-105 (307)
270 1zej_A HBD-9, 3-hydroxyacyl-CO 94.3 0.022 7.4E-07 53.5 3.2 86 43-138 13-114 (293)
271 2o4c_A Erythronate-4-phosphate 94.3 0.03 1E-06 54.5 4.3 63 43-111 117-179 (380)
272 1gad_O D-glyceraldehyde-3-phos 94.2 0.076 2.6E-06 50.7 6.8 91 42-134 1-122 (330)
273 2c20_A UDP-glucose 4-epimerase 94.2 0.18 6.1E-06 46.3 9.2 89 44-132 3-118 (330)
274 1e6u_A GDP-fucose synthetase; 94.2 0.11 3.8E-06 47.5 7.7 85 43-132 4-107 (321)
275 1n7h_A GDP-D-mannose-4,6-dehyd 94.2 0.054 1.8E-06 51.2 5.6 31 43-73 29-59 (381)
276 2r6j_A Eugenol synthase 1; phe 94.1 0.22 7.6E-06 45.6 9.6 85 44-131 13-114 (318)
277 2g82_O GAPDH, glyceraldehyde-3 94.1 0.092 3.2E-06 50.1 7.1 90 43-133 1-120 (331)
278 1ygy_A PGDH, D-3-phosphoglycer 94.1 0.064 2.2E-06 54.3 6.3 71 43-118 143-216 (529)
279 2a35_A Hypothetical protein PA 94.0 0.27 9.2E-06 42.0 9.5 88 43-133 6-115 (215)
280 2yv3_A Aspartate-semialdehyde 94.0 0.057 1.9E-06 51.4 5.5 86 44-134 2-95 (331)
281 3enk_A UDP-glucose 4-epimerase 94.0 0.17 6E-06 46.6 8.7 91 42-132 5-129 (341)
282 3i6i_A Putative leucoanthocyan 94.0 0.16 5.3E-06 47.4 8.3 85 44-128 12-116 (346)
283 1id1_A Putative potassium chan 93.8 0.27 9.1E-06 40.5 8.7 87 44-133 5-107 (153)
284 2yyy_A Glyceraldehyde-3-phosph 93.8 0.069 2.4E-06 51.2 5.6 87 43-134 3-115 (343)
285 3fwz_A Inner membrane protein 93.8 0.058 2E-06 44.1 4.4 74 44-122 9-95 (140)
286 3ojo_A CAP5O; rossmann fold, c 93.8 0.42 1.5E-05 47.1 11.4 105 43-151 12-148 (431)
287 2hk9_A Shikimate dehydrogenase 93.8 0.049 1.7E-06 50.1 4.3 68 42-113 129-200 (275)
288 4hy3_A Phosphoglycerate oxidor 93.7 0.12 4E-06 50.0 7.2 105 42-153 176-286 (365)
289 3ghy_A Ketopantoate reductase 93.7 0.12 4E-06 48.8 6.9 87 43-134 4-107 (335)
290 1sb8_A WBPP; epimerase, 4-epim 93.7 0.25 8.6E-06 46.0 9.2 90 41-132 26-153 (352)
291 3sc6_A DTDP-4-dehydrorhamnose 93.7 0.063 2.2E-06 48.5 4.8 83 43-132 6-106 (287)
292 4e5n_A Thermostable phosphite 93.6 0.059 2E-06 51.3 4.7 63 42-109 145-210 (330)
293 2pzm_A Putative nucleotide sug 93.5 0.22 7.7E-06 46.0 8.5 90 43-132 21-136 (330)
294 3ay3_A NAD-dependent epimerase 93.5 0.12 3.9E-06 46.4 6.2 30 44-74 4-33 (267)
295 3oh8_A Nucleoside-diphosphate 93.3 0.22 7.6E-06 49.6 8.7 88 42-132 147-254 (516)
296 2i99_A MU-crystallin homolog; 93.3 0.08 2.7E-06 49.7 5.1 68 39-109 132-206 (312)
297 1vl0_A DTDP-4-dehydrorhamnose 93.3 0.13 4.3E-06 46.5 6.3 84 42-132 12-113 (292)
298 3g79_A NDP-N-acetyl-D-galactos 93.3 0.4 1.4E-05 47.9 10.3 101 34-138 8-153 (478)
299 2q1w_A Putative nucleotide sug 93.3 0.31 1.1E-05 45.1 9.0 92 41-132 20-137 (333)
300 3vps_A TUNA, NAD-dependent epi 93.2 0.36 1.2E-05 43.7 9.3 88 42-132 7-119 (321)
301 2jl1_A Triphenylmethane reduct 93.0 0.15 5.1E-06 45.8 6.3 87 44-133 2-108 (287)
302 3ius_A Uncharacterized conserv 93.0 0.15 5.1E-06 45.9 6.2 89 42-132 5-103 (286)
303 1y1p_A ARII, aldehyde reductas 93.0 0.38 1.3E-05 44.0 9.2 90 41-132 10-132 (342)
304 3hg7_A D-isomer specific 2-hyd 93.0 0.18 6.2E-06 47.9 7.1 64 42-109 140-204 (324)
305 1xq6_A Unknown protein; struct 93.0 0.52 1.8E-05 41.0 9.6 88 42-132 4-133 (253)
306 1hdg_O Holo-D-glyceraldehyde-3 93.0 0.22 7.6E-06 47.5 7.6 86 43-129 1-119 (332)
307 4b8w_A GDP-L-fucose synthase; 92.9 0.34 1.2E-05 43.5 8.5 86 42-132 6-113 (319)
308 1zcj_A Peroxisomal bifunctiona 92.9 0.23 7.7E-06 49.3 7.8 101 7-121 5-138 (463)
309 3h9e_O Glyceraldehyde-3-phosph 92.8 0.25 8.7E-06 47.4 7.8 92 40-132 5-127 (346)
310 2gn4_A FLAA1 protein, UDP-GLCN 92.8 0.18 6.3E-06 47.3 6.8 97 32-133 13-143 (344)
311 3gpi_A NAD-dependent epimerase 92.8 0.15 5.2E-06 46.0 6.0 88 43-132 4-109 (286)
312 1ek6_A UDP-galactose 4-epimera 92.6 0.35 1.2E-05 44.7 8.4 89 44-132 4-132 (348)
313 3slg_A PBGP3 protein; structur 92.6 0.4 1.4E-05 44.9 8.8 88 42-132 24-141 (372)
314 3st7_A Capsular polysaccharide 92.4 0.18 6.2E-06 47.4 6.2 77 44-132 2-94 (369)
315 1n2s_A DTDP-4-, DTDP-glucose o 92.4 0.14 4.9E-06 46.3 5.3 84 44-132 2-104 (299)
316 2p5y_A UDP-glucose 4-epimerase 92.3 0.31 1.1E-05 44.4 7.6 89 44-132 2-117 (311)
317 2yy7_A L-threonine dehydrogena 92.3 0.23 7.8E-06 45.1 6.6 87 44-132 4-118 (312)
318 3ajr_A NDP-sugar epimerase; L- 92.2 0.39 1.3E-05 43.7 8.1 89 44-132 1-112 (317)
319 1rpn_A GDP-mannose 4,6-dehydra 92.2 0.44 1.5E-05 43.7 8.5 91 42-132 14-138 (335)
320 3sxp_A ADP-L-glycero-D-mannohe 92.2 0.46 1.6E-05 44.4 8.7 89 42-132 10-138 (362)
321 1obf_O Glyceraldehyde 3-phosph 92.1 0.38 1.3E-05 46.0 8.0 88 43-132 2-123 (335)
322 3mog_A Probable 3-hydroxybutyr 92.1 0.16 5.3E-06 50.9 5.5 87 44-137 7-126 (483)
323 3oj0_A Glutr, glutamyl-tRNA re 92.1 0.035 1.2E-06 45.6 0.6 66 42-111 21-92 (144)
324 1rkx_A CDP-glucose-4,6-dehydra 92.1 0.53 1.8E-05 43.7 8.9 89 43-132 10-132 (357)
325 2z1m_A GDP-D-mannose dehydrata 91.9 0.33 1.1E-05 44.5 7.2 90 43-132 4-127 (345)
326 2ewd_A Lactate dehydrogenase,; 91.9 0.51 1.8E-05 44.0 8.6 79 43-128 5-117 (317)
327 3ko8_A NAD-dependent epimerase 91.7 0.66 2.2E-05 42.1 8.9 86 44-132 2-113 (312)
328 2ydy_A Methionine adenosyltran 91.6 0.35 1.2E-05 44.0 7.0 88 43-132 3-110 (315)
329 2g6t_A Uncharacterized protein 91.5 0.38 1.3E-05 45.0 7.0 115 44-164 3-124 (306)
330 1t2a_A GDP-mannose 4,6 dehydra 91.5 0.58 2E-05 43.8 8.6 31 43-73 25-55 (375)
331 3k6j_A Protein F01G10.3, confi 91.5 0.44 1.5E-05 47.4 8.0 90 43-137 55-172 (460)
332 3llv_A Exopolyphosphatase-rela 91.3 0.5 1.7E-05 38.0 7.0 85 44-131 8-103 (141)
333 1hyh_A L-hicdh, L-2-hydroxyiso 91.3 0.54 1.9E-05 43.7 8.1 83 44-131 3-122 (309)
334 1gr0_A Inositol-3-phosphate sy 91.2 3.6 0.00012 39.6 13.7 27 187-213 200-228 (367)
335 1jw9_B Molybdopterin biosynthe 91.2 0.98 3.4E-05 40.8 9.4 35 42-77 31-65 (249)
336 3pym_A GAPDH 3, glyceraldehyde 91.0 0.57 2E-05 44.7 7.9 88 43-131 2-121 (332)
337 3ehe_A UDP-glucose 4-epimerase 91.0 0.65 2.2E-05 42.2 8.2 85 44-132 3-114 (313)
338 1gy8_A UDP-galactose 4-epimera 90.9 1.1 3.8E-05 42.1 9.9 31 43-73 3-34 (397)
339 2ep7_A GAPDH, glyceraldehyde-3 90.8 0.12 4.1E-06 49.6 3.0 88 43-132 3-121 (342)
340 3rft_A Uronate dehydrogenase; 90.8 0.36 1.2E-05 43.3 6.1 27 44-70 5-31 (267)
341 1r6d_A TDP-glucose-4,6-dehydra 90.6 1.3 4.4E-05 40.6 9.8 87 44-132 2-127 (337)
342 1udb_A Epimerase, UDP-galactos 90.5 1 3.6E-05 41.3 9.1 89 44-132 2-124 (338)
343 1smk_A Malate dehydrogenase, g 90.4 1 3.5E-05 42.4 9.1 89 41-132 7-125 (326)
344 3l4b_C TRKA K+ channel protien 90.2 0.76 2.6E-05 40.0 7.6 86 44-132 2-100 (218)
345 2rh8_A Anthocyanidin reductase 90.1 2.2 7.5E-05 39.0 11.0 89 42-132 9-131 (338)
346 3c7a_A Octopine dehydrogenase; 90.1 0.17 5.8E-06 48.7 3.5 75 43-121 3-104 (404)
347 1orr_A CDP-tyvelose-2-epimeras 90.0 1 3.5E-05 41.3 8.6 89 44-132 3-125 (347)
348 3dfz_A SIRC, precorrin-2 dehyd 89.7 0.22 7.7E-06 44.8 3.7 37 39-77 28-64 (223)
349 2hjr_A Malate dehydrogenase; m 89.6 0.87 3E-05 42.9 7.9 82 43-131 15-130 (328)
350 1pzg_A LDH, lactate dehydrogen 89.4 1 3.5E-05 42.5 8.3 88 40-131 7-131 (331)
351 3l9w_A Glutathione-regulated p 89.2 0.3 1E-05 47.8 4.4 78 43-125 5-95 (413)
352 1z45_A GAL10 bifunctional prot 89.0 1.3 4.3E-05 45.7 9.2 91 42-132 11-135 (699)
353 1a5z_A L-lactate dehydrogenase 88.9 0.55 1.9E-05 44.0 6.0 81 44-131 2-116 (319)
354 1kew_A RMLB;, DTDP-D-glucose 4 88.9 0.78 2.7E-05 42.5 7.0 30 44-73 2-32 (361)
355 1gpj_A Glutamyl-tRNA reductase 88.6 0.51 1.7E-05 45.8 5.6 66 41-109 166-237 (404)
356 3rst_A Signal peptide peptidas 88.5 0.55 1.9E-05 42.4 5.4 85 181-276 3-92 (240)
357 3kb6_A D-lactate dehydrogenase 88.3 0.4 1.4E-05 45.6 4.5 62 43-109 142-204 (334)
358 1eq2_A ADP-L-glycero-D-mannohe 88.2 0.7 2.4E-05 41.7 6.0 86 45-132 2-116 (310)
359 2c29_D Dihydroflavonol 4-reduc 88.1 2.9 0.0001 38.2 10.3 88 43-132 6-128 (337)
360 2ggs_A 273AA long hypothetical 88.1 0.85 2.9E-05 40.3 6.4 87 44-132 2-107 (273)
361 2hrz_A AGR_C_4963P, nucleoside 88.0 1.8 6.2E-05 39.7 8.8 90 42-132 14-141 (342)
362 3nzo_A UDP-N-acetylglucosamine 88.0 0.9 3.1E-05 43.6 6.9 91 43-134 36-167 (399)
363 1fjh_A 3alpha-hydroxysteroid d 87.9 1.3 4.4E-05 39.1 7.4 27 44-70 3-29 (257)
364 1x7d_A Ornithine cyclodeaminas 87.9 0.67 2.3E-05 44.3 5.8 84 40-126 127-222 (350)
365 1guz_A Malate dehydrogenase; o 87.9 2 6.8E-05 39.9 9.0 59 44-109 2-79 (310)
366 1db3_A GDP-mannose 4,6-dehydra 87.9 1.3 4.5E-05 41.1 7.8 29 44-72 3-31 (372)
367 1oc2_A DTDP-glucose 4,6-dehydr 87.8 1.5 5E-05 40.4 8.0 87 43-132 5-125 (348)
368 1wdk_A Fatty oxidation complex 87.7 0.28 9.5E-06 51.4 3.3 87 44-137 316-435 (715)
369 3u62_A Shikimate dehydrogenase 87.1 0.38 1.3E-05 43.9 3.4 104 44-158 110-221 (253)
370 2b69_A UDP-glucuronate decarbo 87.1 1.6 5.5E-05 40.2 7.8 33 41-73 26-58 (343)
371 1xg5_A ARPG836; short chain de 87.0 1.9 6.4E-05 38.7 8.1 53 21-74 11-63 (279)
372 2x6t_A ADP-L-glycero-D-manno-h 86.9 0.97 3.3E-05 42.0 6.3 89 43-132 47-163 (357)
373 2bll_A Protein YFBG; decarboxy 86.9 1.8 6.2E-05 39.5 8.1 86 44-132 2-117 (345)
374 3lvf_P GAPDH 1, glyceraldehyde 86.7 1.7 5.8E-05 41.5 7.8 90 42-132 4-124 (338)
375 1lld_A L-lactate dehydrogenase 86.6 0.85 2.9E-05 42.1 5.7 88 42-134 7-127 (319)
376 3hja_A GAPDH, glyceraldehyde-3 86.6 0.33 1.1E-05 46.8 2.8 92 40-132 19-145 (356)
377 4dqv_A Probable peptide synthe 86.6 0.79 2.7E-05 45.1 5.7 33 41-73 72-107 (478)
378 2p4h_X Vestitone reductase; NA 86.5 2.3 8E-05 38.4 8.5 30 44-73 3-32 (322)
379 3orf_A Dihydropteridine reduct 86.3 2.5 8.6E-05 37.4 8.5 72 44-134 24-97 (251)
380 2v6b_A L-LDH, L-lactate dehydr 86.3 1.7 5.9E-05 40.3 7.6 81 44-129 2-113 (304)
381 3ce6_A Adenosylhomocysteinase; 86.3 0.65 2.2E-05 46.6 4.9 67 42-113 274-343 (494)
382 3doc_A Glyceraldehyde 3-phosph 86.2 1.2 4.1E-05 42.5 6.5 89 42-131 2-123 (335)
383 1i24_A Sulfolipid biosynthesis 86.1 2.1 7.1E-05 40.2 8.2 32 41-72 10-41 (404)
384 2wtb_A MFP2, fatty acid multif 86.0 0.62 2.1E-05 48.9 4.8 87 44-137 314-433 (725)
385 2hun_A 336AA long hypothetical 85.7 3 0.0001 38.0 8.8 88 43-132 4-127 (336)
386 2dkn_A 3-alpha-hydroxysteroid 85.5 1.4 4.8E-05 38.3 6.3 28 44-71 3-30 (255)
387 1y7o_A ATP-dependent CLP prote 85.1 0.92 3.2E-05 40.4 4.8 53 224-276 63-116 (218)
388 1omo_A Alanine dehydrogenase; 85.1 1.1 3.6E-05 42.2 5.5 80 40-126 123-213 (322)
389 4dib_A GAPDH, glyceraldehyde 3 85.0 1.5 5.1E-05 42.0 6.5 90 42-132 4-124 (345)
390 3v1y_O PP38, glyceraldehyde-3- 84.8 1.5 5E-05 41.9 6.3 89 42-131 3-125 (337)
391 4g65_A TRK system potassium up 84.0 0.99 3.4E-05 44.7 5.0 69 41-112 2-81 (461)
392 2v6g_A Progesterone 5-beta-red 83.8 1.1 3.8E-05 41.4 5.0 86 43-128 2-116 (364)
393 3ctm_A Carbonyl reductase; alc 83.8 7.4 0.00025 34.6 10.4 29 42-70 34-62 (279)
394 2cby_A ATP-dependent CLP prote 83.6 1.2 4.1E-05 39.3 4.9 66 210-276 29-98 (208)
395 3slk_A Polyketide synthase ext 83.5 31 0.0011 36.3 16.5 225 42-274 346-622 (795)
396 1leh_A Leucine dehydrogenase; 83.5 0.84 2.9E-05 44.0 4.1 79 42-128 173-257 (364)
397 1zud_1 Adenylyltransferase THI 83.4 2.3 8E-05 38.3 6.9 35 42-77 28-62 (251)
398 2wsb_A Galactitol dehydrogenas 83.4 4.4 0.00015 35.3 8.6 32 43-75 12-43 (254)
399 1y8q_A Ubiquitin-like 1 activa 83.1 4.3 0.00015 38.5 8.9 116 42-163 36-162 (346)
400 1v8b_A Adenosylhomocysteinase; 82.6 0.86 2.9E-05 45.6 3.9 64 44-112 259-325 (479)
401 3eag_A UDP-N-acetylmuramate:L- 82.3 3.3 0.00011 38.7 7.6 78 43-126 5-93 (326)
402 1ur5_A Malate dehydrogenase; o 82.2 2.8 9.7E-05 38.9 7.1 82 43-131 3-118 (309)
403 3d64_A Adenosylhomocysteinase; 82.2 0.71 2.4E-05 46.4 3.1 64 43-111 278-344 (494)
404 1yg6_A ATP-dependent CLP prote 81.8 1.5 5.3E-05 38.1 4.8 53 224-276 44-97 (193)
405 1b8p_A Protein (malate dehydro 81.8 4.7 0.00016 37.8 8.5 88 41-131 4-133 (329)
406 3v8b_A Putative dehydrogenase, 81.8 4.1 0.00014 36.9 7.9 104 15-134 7-115 (283)
407 4hv4_A UDP-N-acetylmuramate--L 81.7 6.9 0.00024 38.8 10.1 78 41-125 21-107 (494)
408 4fcc_A Glutamate dehydrogenase 81.7 4 0.00014 40.4 8.2 128 40-202 233-390 (450)
409 1kyq_A Met8P, siroheme biosynt 81.6 1.6 5.4E-05 40.5 5.0 39 37-77 8-46 (274)
410 1y6j_A L-lactate dehydrogenase 81.6 7.6 0.00026 36.2 9.9 86 42-131 7-122 (318)
411 1o5i_A 3-oxoacyl-(acyl carrier 80.8 8.6 0.00029 33.9 9.6 30 44-74 21-50 (249)
412 1pjq_A CYSG, siroheme synthase 80.7 3.4 0.00012 40.7 7.4 82 39-126 9-100 (457)
413 4f6c_A AUSA reductase domain p 80.7 1.4 4.8E-05 42.2 4.5 31 43-73 70-100 (427)
414 4e3z_A Putative oxidoreductase 80.2 4.9 0.00017 35.9 7.8 82 44-134 28-114 (272)
415 3lk7_A UDP-N-acetylmuramoylala 80.2 3.4 0.00012 40.4 7.2 79 43-126 10-99 (451)
416 3don_A Shikimate dehydrogenase 80.0 0.97 3.3E-05 41.8 3.0 69 42-113 117-189 (277)
417 1t2d_A LDH-P, L-lactate dehydr 79.9 4 0.00014 38.2 7.4 82 43-129 5-123 (322)
418 3o38_A Short chain dehydrogena 79.5 11 0.00037 33.2 9.8 84 42-134 22-111 (266)
419 3h5n_A MCCB protein; ubiquitin 79.4 5.3 0.00018 38.0 8.1 35 42-77 118-152 (353)
420 2i6t_A Ubiquitin-conjugating e 79.0 6.1 0.00021 36.7 8.2 85 43-131 15-124 (303)
421 3hdj_A Probable ornithine cycl 78.9 2.3 7.8E-05 39.9 5.3 67 39-110 118-194 (313)
422 2aef_A Calcium-gated potassium 78.6 2.6 9E-05 36.9 5.3 80 44-128 11-102 (234)
423 3h9u_A Adenosylhomocysteinase; 78.2 0.95 3.2E-05 44.8 2.4 96 42-144 211-311 (436)
424 3ids_C GAPDH, glyceraldehyde-3 78.2 2.1 7.1E-05 41.2 4.7 87 42-129 2-133 (359)
425 3v2h_A D-beta-hydroxybutyrate 77.7 4 0.00014 36.9 6.4 83 44-134 27-114 (281)
426 1z7e_A Protein aRNA; rossmann 77.7 6.7 0.00023 40.0 8.8 88 42-132 315-432 (660)
427 3vh1_A Ubiquitin-like modifier 77.6 4.1 0.00014 41.8 7.0 34 42-76 327-360 (598)
428 3vku_A L-LDH, L-lactate dehydr 77.6 3.3 0.00011 39.2 5.9 41 35-76 2-43 (326)
429 2nm0_A Probable 3-oxacyl-(acyl 77.5 9.5 0.00033 33.8 8.8 27 44-70 23-49 (253)
430 4egf_A L-xylulose reductase; s 76.7 3 0.0001 37.3 5.2 94 34-134 12-108 (266)
431 3vtz_A Glucose 1-dehydrogenase 76.6 7.1 0.00024 35.0 7.7 78 40-134 12-91 (269)
432 2b4r_O Glyceraldehyde-3-phosph 76.3 5.1 0.00017 38.3 6.9 87 42-129 11-129 (345)
433 5nul_A Flavodoxin; electron tr 76.1 6.1 0.00021 31.4 6.5 62 92-157 41-113 (138)
434 2tmg_A Protein (glutamate dehy 76.0 7.3 0.00025 38.1 8.1 84 41-128 208-312 (415)
435 3viv_A 441AA long hypothetical 76.0 4.3 0.00015 36.5 6.0 74 179-276 6-83 (230)
436 3r1i_A Short-chain type dehydr 75.9 5.6 0.00019 35.8 6.9 90 37-134 27-119 (276)
437 1uzm_A 3-oxoacyl-[acyl-carrier 75.7 8.9 0.0003 33.7 8.0 27 44-70 17-43 (247)
438 4da9_A Short-chain dehydrogena 75.5 2.5 8.7E-05 38.2 4.4 82 44-134 31-117 (280)
439 3h8v_A Ubiquitin-like modifier 75.5 4.2 0.00014 37.9 5.9 36 41-77 35-70 (292)
440 1y7t_A Malate dehydrogenase; N 75.5 10 0.00035 35.0 8.8 88 42-132 4-131 (327)
441 3fi9_A Malate dehydrogenase; s 75.5 3.8 0.00013 39.0 5.8 34 42-76 8-43 (343)
442 2egg_A AROE, shikimate 5-dehyd 75.4 2 6.9E-05 39.8 3.8 68 42-112 141-217 (297)
443 3bf0_A Protease 4; bacterial, 75.3 2.6 9E-05 43.0 4.9 55 222-276 326-384 (593)
444 3rui_A Ubiquitin-like modifier 74.3 10 0.00035 36.1 8.4 35 42-77 34-68 (340)
445 2hq1_A Glucose/ribitol dehydro 73.6 11 0.00039 32.5 8.1 28 44-71 7-34 (247)
446 3gqv_A Enoyl reductase; medium 73.6 3.2 0.00011 39.2 4.8 36 42-77 165-200 (371)
447 1sby_A Alcohol dehydrogenase; 73.4 8.6 0.00029 33.7 7.3 80 44-134 7-94 (254)
448 3un1_A Probable oxidoreductase 73.3 5 0.00017 35.8 5.8 76 42-134 28-106 (260)
449 3bf0_A Protease 4; bacterial, 72.8 2.5 8.4E-05 43.2 3.9 48 223-270 75-127 (593)
450 4f6l_B AUSA reductase domain p 72.8 1.5 5.2E-05 43.1 2.4 32 42-73 150-181 (508)
451 3qwd_A ATP-dependent CLP prote 72.5 4.1 0.00014 35.9 4.8 65 210-275 29-97 (203)
452 2bma_A Glutamate dehydrogenase 72.5 9.9 0.00034 37.8 8.1 109 41-155 251-388 (470)
453 4e2x_A TCAB9; kijanose, tetron 72.2 4.6 0.00016 38.5 5.6 83 42-128 319-408 (416)
454 2vhw_A Alanine dehydrogenase; 72.1 2.3 7.8E-05 40.7 3.3 34 42-77 168-201 (377)
455 3d7l_A LIN1944 protein; APC893 72.1 3.8 0.00013 34.4 4.5 32 43-76 4-35 (202)
456 4b4o_A Epimerase family protei 71.9 3.1 0.0001 37.5 4.0 31 43-73 1-31 (298)
457 3aog_A Glutamate dehydrogenase 71.7 4.7 0.00016 39.8 5.6 34 41-75 234-267 (440)
458 3gem_A Short chain dehydrogena 71.7 5.9 0.0002 35.3 5.9 78 44-134 29-109 (260)
459 2fwm_X 2,3-dihydro-2,3-dihydro 71.4 17 0.00056 31.9 8.7 31 44-75 9-39 (250)
460 1sny_A Sniffer CG10964-PA; alp 71.4 14 0.00046 32.4 8.2 82 43-134 22-112 (267)
461 3v2g_A 3-oxoacyl-[acyl-carrier 71.4 2.1 7.1E-05 38.7 2.7 82 44-134 33-119 (271)
462 3dcm_X AdoMet, uncharacterized 71.3 6.8 0.00023 34.3 5.9 102 56-166 32-150 (192)
463 2d4a_B Malate dehydrogenase; a 71.0 5.7 0.0002 36.9 5.8 80 44-128 1-112 (308)
464 3r3j_A Glutamate dehydrogenase 70.9 14 0.00048 36.5 8.8 109 41-155 238-375 (456)
465 3ijr_A Oxidoreductase, short c 70.8 24 0.00083 31.7 9.9 82 43-133 48-134 (291)
466 1xq1_A Putative tropinone redu 70.6 15 0.0005 32.2 8.2 32 43-75 15-46 (266)
467 2vpq_A Acetyl-COA carboxylase; 70.6 13 0.00044 35.8 8.4 29 44-74 3-31 (451)
468 2we8_A Xanthine dehydrogenase; 70.1 17 0.00058 35.1 9.0 87 38-127 201-301 (386)
469 3bfp_A Acetyltransferase; LEFT 70.0 8.1 0.00028 33.0 6.1 68 44-125 5-73 (194)
470 3op4_A 3-oxoacyl-[acyl-carrier 69.7 6.1 0.00021 34.8 5.4 82 43-134 10-93 (248)
471 1mld_A Malate dehydrogenase; o 69.3 8 0.00027 36.0 6.4 85 44-131 2-116 (314)
472 3vtf_A UDP-glucose 6-dehydroge 68.9 19 0.00064 35.5 9.2 33 42-76 21-53 (444)
473 3kvo_A Hydroxysteroid dehydrog 68.9 16 0.00053 34.3 8.4 88 43-134 46-139 (346)
474 3p2l_A ATP-dependent CLP prote 68.9 5.5 0.00019 35.0 4.8 66 210-276 32-101 (201)
475 3ftp_A 3-oxoacyl-[acyl-carrier 68.8 5.5 0.00019 35.8 5.0 83 44-134 30-115 (270)
476 2q2v_A Beta-D-hydroxybutyrate 68.5 8.3 0.00029 33.9 6.1 79 44-134 6-89 (255)
477 3h7a_A Short chain dehydrogena 68.3 21 0.00071 31.4 8.7 81 44-134 9-93 (252)
478 1zmt_A Haloalcohol dehalogenas 68.1 9.2 0.00031 33.7 6.3 78 44-134 3-82 (254)
479 3qiv_A Short-chain dehydrogena 67.9 9 0.00031 33.5 6.1 81 44-134 11-96 (253)
480 3sc4_A Short chain dehydrogena 67.7 9.6 0.00033 34.3 6.4 87 44-134 11-103 (285)
481 3pqe_A L-LDH, L-lactate dehydr 67.5 8.7 0.0003 36.1 6.3 81 42-129 5-119 (326)
482 2f6i_A ATP-dependent CLP prote 67.5 5.9 0.0002 35.1 4.8 65 209-275 40-108 (215)
483 1tt5_B Ubiquitin-activating en 67.4 28 0.00095 34.0 10.1 33 42-75 40-72 (434)
484 2zqz_A L-LDH, L-lactate dehydr 67.4 12 0.0004 35.1 7.1 39 36-75 3-42 (326)
485 1tt5_A APPBP1, amyloid protein 67.3 9.8 0.00034 38.3 6.9 35 42-77 32-66 (531)
486 1lnq_A MTHK channels, potassiu 67.2 4.7 0.00016 37.4 4.3 76 44-125 117-204 (336)
487 4g81_D Putative hexonate dehyd 67.2 25 0.00085 31.7 9.1 38 37-75 4-41 (255)
488 1bgv_A Glutamate dehydrogenase 66.9 24 0.00082 34.8 9.4 86 41-128 229-343 (449)
489 3ezl_A Acetoacetyl-COA reducta 66.7 6.9 0.00024 34.3 5.1 86 40-134 11-101 (256)
490 3gvi_A Malate dehydrogenase; N 66.7 17 0.00058 34.1 8.1 83 43-130 8-122 (324)
491 3edm_A Short chain dehydrogena 66.2 8.9 0.0003 34.0 5.8 82 44-133 10-95 (259)
492 4dyv_A Short-chain dehydrogena 66.2 7.9 0.00027 34.8 5.5 80 44-134 30-112 (272)
493 3n58_A Adenosylhomocysteinase; 66.1 9.5 0.00032 37.9 6.3 88 43-135 248-337 (464)
494 2eez_A Alanine dehydrogenase; 65.5 3.7 0.00013 39.0 3.3 32 43-76 167-198 (369)
495 1o6z_A MDH, malate dehydrogena 65.5 7.4 0.00025 36.0 5.2 83 44-131 2-118 (303)
496 1ulz_A Pyruvate carboxylase N- 65.4 14 0.00049 35.5 7.5 29 44-74 4-32 (451)
497 3oig_A Enoyl-[acyl-carrier-pro 65.4 25 0.00085 30.8 8.6 81 44-134 9-97 (266)
498 3phh_A Shikimate dehydrogenase 65.3 4.7 0.00016 37.0 3.8 102 42-155 118-228 (269)
499 4gsl_A Ubiquitin-like modifier 65.2 17 0.00057 37.4 8.2 35 42-77 326-360 (615)
500 2dtx_A Glucose 1-dehydrogenase 65.0 17 0.00057 32.3 7.4 72 44-134 10-84 (264)
No 1
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=100.00 E-value=6e-72 Score=535.86 Aligned_cols=299 Identities=68% Similarity=1.107 Sum_probs=272.4
Q ss_pred CCCCCCCCcccccCcCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEE
Q 019500 26 SFTTAPPPAPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAI 105 (340)
Q Consensus 26 ~~~~~~~~l~~lf~p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi 105 (340)
+|+++. +..||.|++++ +|+|+|+++|+.++++++++||+++++|||+..|++++|+|||+|++|+++++++|++++
T Consensus 1 ~~~~~~--~~~l~~~~sia-VV~Gasg~~G~~~~~~l~~~G~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~vD~avI 77 (305)
T 2fp4_A 1 SYTASR--KHLYVDKNTKV-ICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTHLGLPVFNTVKEAKEQTGATASVI 77 (305)
T ss_dssp CTGGGG--GGGCCCTTCEE-EEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEE
T ss_pred CchhhH--HHHHhCCCcEE-EEECCCCCHHHHHHHHHHHCCCcEEEEeCCCcCcceECCeeeechHHHhhhcCCCCEEEE
Confidence 477774 77788887764 456999999999999999999998889999975578999999999999998446999999
Q ss_pred ecChhhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccC-CcEEEccCCCCcccCC-CcccccCCCCCCCCCcE
Q 019500 106 YVPPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQS-KTRLVGPNCPGVIKPG-ECKIGIMPGYIHKPGRI 183 (340)
Q Consensus 106 ~vp~~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~-girviGPNc~Gi~~p~-~~~~~~~~~~~~~~G~v 183 (340)
++|++.+++++++|+++|++.+||+|+||++++++++.+.+ +++ |++++||||+|+++|. +++ +++|...++||+|
T Consensus 78 ~vP~~~~~~~~~e~i~~Gi~~iv~~t~G~~~~~~~~l~~~a-~~~~gi~liGPnc~Gii~p~~~~~-~~~~~~~~~~G~v 155 (305)
T 2fp4_A 78 YVPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRL-LRQGKTRLIGPNCPGVINPGECKI-GIMPGHIHKKGRI 155 (305)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHH-TTCSSCEEECSSSCEEEETTTEEE-ESSCGGGCCEEEE
T ss_pred ecCHHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHH-HhcCCcEEEeCCCCeEecccccce-eeccccCCCCCCE
Confidence 99999999999999999999999999999988877888876 788 9999999999999998 443 4556656889999
Q ss_pred EEEecChHHHHHHHHHHHhCCCCceEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEccCCCcHHHHHHHHHHhC--
Q 019500 184 GIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESG-- 261 (340)
Q Consensus 184 alvSQSG~l~~~~~~~~~~~giG~S~~vs~Gn~a~~dv~~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~~f~~a~r-- 261 (340)
|||||||++++++++|+.++|+|||++||+||+++.|+++.|+|+||.+||+|++|+||+|++|++++++++|+++++
T Consensus 156 a~vSqSG~l~~~~~~~~~~~g~G~S~~vs~G~~~~~~~~~~d~l~~~~~Dp~T~~I~l~~E~~g~~e~~~~~f~~~~~~~ 235 (305)
T 2fp4_A 156 GIVSRSGTLTYEAVHQTTQVGLGQSLCVGIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSG 235 (305)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCCEEEEEECCSSSSCSCCHHHHHHHHHHCTTCCEEEEEEESSSSHHHHHHHHHHHHSCS
T ss_pred EEEecchHHHHHHHHHHHhcCCCeeEEeccCCCcCCCCCHHHHHHHHhcCCCCcEEEEEEecCCchhhHHHHHHHHHHHh
Confidence 999999999999999999999999999999999877899999999999999999999999999998899999999876
Q ss_pred -CCCCEEEEEeCCCCCCCCcccccCcccccccccceecCCCCcHHHHHHHHHHcCCeecCCHHHHHHHHHHHHHhcCC
Q 019500 262 -TEKPIVAFIAGLTAPPGRRMGHAGVDVYTIFGSAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGAAMLEVFKQRGL 338 (340)
Q Consensus 262 -~~KPVvvlk~Grs~~~g~~~sHtg~~~~~~~~~ala~~~~g~~~~~~a~~~qaGvv~v~~~~el~~~~~~~~~~~~~ 338 (340)
++||||++|+||+++.|+++|||| |+++++.|++++|+++|||+|++++++++||+|++++++++.++
T Consensus 236 ~~~KPVv~~k~G~s~~~g~~~~Htg---------al~~~~~g~~~~~~aa~~~aGv~~v~~~~el~~~~~~~~~~~~~ 304 (305)
T 2fp4_A 236 PKSKPVVSFIAGLTAPPGRRMGHAG---------AIIAGGKGGAKEKITALQSAGVVVSMSPAQLGTTIYKEFEKRKM 304 (305)
T ss_dssp TTCCCEEEEEECTTCCTTCCCSSTT---------CCCBTTBCCHHHHHHHHHHTTCEECSSTTCHHHHHHHHHHHTTC
T ss_pred cCCCCEEEEEecCCccccccccchh---------hhhccCCccHHHHHHHHHHCCCeEeCCHHHHHHHHHHHHHhccC
Confidence 599999999999995488899999 99887778999999999999999999999999999999987654
No 2
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=100.00 E-value=7.5e-72 Score=533.42 Aligned_cols=289 Identities=52% Similarity=0.878 Sum_probs=246.6
Q ss_pred cccccCcCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCC-CcEEEEecChhhH
Q 019500 34 APAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETK-ANASAIYVPPPFA 112 (340)
Q Consensus 34 l~~lf~p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~-vDlavi~vp~~~v 112 (340)
+..||.|+ ++|+|+|+|+++|+.+.++++++||+++++|||+..|+++.|+|+|+|++|++++++ +|++++|+|++.+
T Consensus 6 ~~~l~~~~-~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~~~DvaIi~vp~~~~ 84 (297)
T 2yv2_A 6 MAVLVDSE-TRVLVQGITGREGSFHAKAMLEYGTKVVAGVTPGKGGSEVHGVPVYDSVKEALAEHPEINTSIVFVPAPFA 84 (297)
T ss_dssp ---CCSTT-CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHCTTCCEEEECCCGGGH
T ss_pred hhHhhCCC-CEEEEECCCCCHHHHHHHHHHhCCCcEEEEeCCCCCCceECCEeeeCCHHHHhhcCCCCCEEEEecCHHHH
Confidence 66677665 467788999999999999999999998899999976678999999999999997434 9999999999999
Q ss_pred HHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCCCCcccCC-CcccccCCCCCCCCCcEEEEecChH
Q 019500 113 AAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPG-ECKIGIMPGYIHKPGRIGIVSRSGT 191 (340)
Q Consensus 113 ~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc~Gi~~p~-~~~~~~~~~~~~~~G~valvSQSG~ 191 (340)
++++++|+++|++.+|++|+||++++.+++.+++ +++|++++||||+|++||+ +++ +++|...++||+||||||||+
T Consensus 85 ~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A-~~~gi~viGPNc~Gii~~~~~~~-~~~~~~~~~~G~va~vSqSG~ 162 (297)
T 2yv2_A 85 PDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYA-RQKGATIIGPNCPGAITPGQAKV-GIMPGHIFKEGGVAVVSRSGT 162 (297)
T ss_dssp HHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHH-HHHTCEEECSSSCEEEETTTEEE-ESCCGGGCCEEEEEEEESCHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH-HHcCCEEEcCCCCeeEcccccce-eecccCCCCCCCEEEEECCHH
Confidence 9999999999999989999999998888888877 7899999999999999998 444 345555678999999999999
Q ss_pred HHHHHHHHHHhCCCCceEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEccCCCcHHHHHHHHHHhCCCCCEEEEEe
Q 019500 192 LTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESGTEKPIVAFIA 271 (340)
Q Consensus 192 l~~~~~~~~~~~giG~S~~vs~Gn~a~~dv~~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~~f~~a~r~~KPVvvlk~ 271 (340)
+++++++|+.++|+|||++||+||+++.|+++.|+|+||.+||+|++|+||+|++|++++++++|+++.+++||||+||+
T Consensus 163 l~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~~~~D~~T~~I~l~~E~~~~~~~~~~~~~~~~~~~KPVv~~k~ 242 (297)
T 2yv2_A 163 LTYEISYMLTRQGIGQSTVIGIGGDPIVGLSFTEALKLFQEDPQTEALVLIGEIGGDMEERAAEMIKKGEFTKPVIAYIA 242 (297)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCSEEEEEECSSSSHHHHHHHHHHTTSCCSCEEEEES
T ss_pred HHHHHHHHHHHcCCCeeEEEeeCCCcCCCCCHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHhccCCCCEEEEEe
Confidence 99999999999999999999999998778899999999999999999999999999999999999998678999999999
Q ss_pred CCCCCCCCcccccCcccccccccceecCCCCcHHHHHHHHHHcCCeecCCHHHHHHHHHHHHH
Q 019500 272 GLTAPPGRRMGHAGVDVYTIFGSAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGAAMLEVFK 334 (340)
Q Consensus 272 Grs~~~g~~~sHtg~~~~~~~~~ala~~~~g~~~~~~a~~~qaGvv~v~~~~el~~~~~~~~~ 334 (340)
||+++.|+++|||| |+++++.|++++|+++|||+|+++++|++||+|+++++|+
T Consensus 243 G~s~~~~~~~sHtg---------al~~~~~g~~~~~~aa~~~aGv~~v~~~~el~~~~~~~~~ 296 (297)
T 2yv2_A 243 GRTAPPEKRMGHAG---------AIIMMGTGTYEGKVKALREAGVEVAETPFEVPELVRKALR 296 (297)
T ss_dssp CCC---------------------------CSHHHHHHHHHTTTCEEESSGGGHHHHHHHHC-
T ss_pred CCCCccccccCCcc---------ccccCCCCCHHHHHHHHHHcCCeEeCCHHHHHHHHHHHhh
Confidence 99996588899999 9987777999999999999999999999999999998763
No 3
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=100.00 E-value=1e-71 Score=530.29 Aligned_cols=285 Identities=52% Similarity=0.863 Sum_probs=248.0
Q ss_pred ccCcCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChhhHHHHH
Q 019500 37 VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAI 116 (340)
Q Consensus 37 lf~p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v 116 (340)
+|.++.++|+|+|+|+++|+.+.++++++||+++++|||+..|+++.|+|+|+|++|+++++++|++++|+|++.+++++
T Consensus 2 ~~~~~~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~~~~~~~~ 81 (288)
T 1oi7_A 2 ILVNRETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEVLGVPVYDTVKEAVAHHEVDASIIFVPAPAAADAA 81 (288)
T ss_dssp CSCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHSCCSEEEECCCHHHHHHHH
T ss_pred eecCCCCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCCceECCEEeeCCHHHHhhcCCCCEEEEecCHHHHHHHH
Confidence 56677889999999999999999999999999889999998667899999999999999855699999999999999999
Q ss_pred HHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCCCCcccCC-CcccccCCCCCCCCCcEEEEecChHHHHH
Q 019500 117 LEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPG-ECKIGIMPGYIHKPGRIGIVSRSGTLTYE 195 (340)
Q Consensus 117 ~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc~Gi~~p~-~~~~~~~~~~~~~~G~valvSQSG~l~~~ 195 (340)
++|+++|++.+|++|+||++++.+++.+.+ +++|++++||||+|++||. +++. ++|...++||+||||||||+++++
T Consensus 82 ~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~a-~~~gi~vigPNc~Gii~~~~~~~~-~~~~~~~~~G~va~vsqSG~l~~~ 159 (288)
T 1oi7_A 82 LEAAHAGIPLIVLITEGIPTLDMVRAVEEI-KALGSRLIGGNCPGIISAEETKIG-IMPGHVFKRGRVGIISRSGTLTYE 159 (288)
T ss_dssp HHHHHTTCSEEEECCSCCCHHHHHHHHHHH-HHHTCEEEESSSCEEEETTTEEEE-SSCGGGCCEEEEEEEESCHHHHHH
T ss_pred HHHHHCCCCEEEEECCCCCHHHHHHHHHHH-HHcCCEEEeCCCCeEEcCCCceeE-EcccCCCCCCCEEEEECCHHHHHH
Confidence 999999999999999999998888888876 7899999999999999998 4443 345556789999999999999999
Q ss_pred HHHHHHhCCCCceEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEccCCCcHHHHHHHHHHhCCCCCEEEEEeCCCC
Q 019500 196 AVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESGTEKPIVAFIAGLTA 275 (340)
Q Consensus 196 ~~~~~~~~giG~S~~vs~Gn~a~~dv~~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~~f~~a~r~~KPVvvlk~Grs~ 275 (340)
+++|+.++|+|||++||+||+++.|+++.|+|+||.+||+|++|+||+|++|++++++++|+++ +++||||+||+||++
T Consensus 160 ~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~~~~D~~t~~I~l~~E~~~~~~~~~~~~~~~-~~~KPVv~~k~G~~~ 238 (288)
T 1oi7_A 160 AAAALSQAGLGTTTTVGIGGDPVIGTTFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKD-HMKKPVVGFIGGRSA 238 (288)
T ss_dssp HHHHHHHTTCCEEEEEECCSSSCCSSCHHHHHHHHHTCTTCCEEEEEECSSSSHHHHHHHHHHH-HCCSCEEEEESCC--
T ss_pred HHHHHHhCCCCEEEEEeeCCCcCCCCCHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHh-cCCCCEEEEEecCCC
Confidence 9999999999999999999998778999999999999999999999999999999999999987 579999999999999
Q ss_pred CCCCcccccCcccccccccceecCCCCcHHHHHHHHHHcCCeecCCHHHHHHHHHHHH
Q 019500 276 PPGRRMGHAGVDVYTIFGSAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGAAMLEVF 333 (340)
Q Consensus 276 ~~g~~~sHtg~~~~~~~~~ala~~~~g~~~~~~a~~~qaGvv~v~~~~el~~~~~~~~ 333 (340)
+.|+++|||| |+++++.|++++|+++|||+|++++++++||+|++++++
T Consensus 239 ~~~~~~~Htg---------al~~~~~g~~~~~~aa~~~aGv~~~~~~~el~~~~~~~~ 287 (288)
T 1oi7_A 239 PKGKRMGHAG---------AIIMGNVGTPESKLRAFAEAGIPVADTIDEIVELVKKAL 287 (288)
T ss_dssp -------------------------CCSHHHHHHHHHHHTCCBCSSHHHHHHHHHHHH
T ss_pred CccccCcchh---------hcccCCCCCHHHHHHHHHHCCCeEeCCHHHHHHHHHHHh
Confidence 5488899999 998777799999999999999999999999999999876
No 4
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.3e-71 Score=531.00 Aligned_cols=288 Identities=48% Similarity=0.822 Sum_probs=245.7
Q ss_pred CcccccCcCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChhhH
Q 019500 33 PAPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFA 112 (340)
Q Consensus 33 ~l~~lf~p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v 112 (340)
.|..||.|++ +++|+|+|+++|+.+.++++++||+++++|||+..++++.|+|+|+|++|+++++++|++++|+|++.+
T Consensus 5 ~l~~l~~~~~-~v~V~Gasg~~G~~~~~~l~~~g~~~V~~VnP~~~g~~i~G~~vy~sl~el~~~~~~Dv~ii~vp~~~~ 83 (294)
T 2yv1_A 5 DKMILLDENT-KAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQNVHGVPVFDTVKEAVKETDANASVIFVPAPFA 83 (294)
T ss_dssp --CCSSCTTC-CEEEETTTSHHHHHHHHHHHHTTCCEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCHHHH
T ss_pred HHHHHhCCCC-EEEEECCCCCHHHHHHHHHHhCCCeEEEEeCCCCCCceECCEeeeCCHHHHhhcCCCCEEEEccCHHHH
Confidence 3777887755 567789999999999999999999988999999765789999999999999974459999999999999
Q ss_pred HHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCCCCcccCC-CcccccCCCCCCCCCcEEEEecChH
Q 019500 113 AAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPG-ECKIGIMPGYIHKPGRIGIVSRSGT 191 (340)
Q Consensus 113 ~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc~Gi~~p~-~~~~~~~~~~~~~~G~valvSQSG~ 191 (340)
++++++|+++|++.+|++|+||++++.+++.+++ +++|++++||||+|++||. +++ +++|...++||+||||||||+
T Consensus 84 ~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A-~~~gi~viGPNc~Gii~~~~~~~-~~~~~~~~~~G~va~vSqSG~ 161 (294)
T 2yv1_A 84 KDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYA-EDVGVKIIGPNTPGIASPKVGKL-GIIPMEVLKEGSVGMVSRSGT 161 (294)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHH-HHHTCEEECSSCCEEEETTTEEE-ECCCGGGCCEEEEEEEESCSH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH-HHcCCEEEcCCCceeeccCccee-eecccCCCCCCCEEEEECCHH
Confidence 9999999999999989999999999888888876 7899999999999999998 444 344555678999999999999
Q ss_pred HHHHHHHHHHhCCCCceEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEccCCCcHHHHHHHHHHhCCCCCEEEEEe
Q 019500 192 LTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESGTEKPIVAFIA 271 (340)
Q Consensus 192 l~~~~~~~~~~~giG~S~~vs~Gn~a~~dv~~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~~f~~a~r~~KPVvvlk~ 271 (340)
+++++++|+.++|+|||++||+||+++.|+++.|+|+||.+||+|++|+||+|++|++++++++|+++ ++||||+||+
T Consensus 162 l~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~~~~D~~T~~I~l~~E~~g~~~~~~~~~~~~--~~KPVv~~k~ 239 (294)
T 2yv1_A 162 LTYEIAHQIKKAGFGVSTCVGIGGDPIVGLRYKEVLDLFEKDDETEAIVMIGEIGGGAEEEAAKFIEK--MKKPVIGYIA 239 (294)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCSEEEEEEESSSSHHHHHHHHHTT--CSSCEEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEEeeCCCCCCCCCHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHh--CCCCEEEEEe
Confidence 99999999999999999999999998778999999999999999999999999999988888888876 7999999999
Q ss_pred CCCCCCCCcccccCcccccccccceecCCCCcHHHHHHHHHHcCCeecCCHHHHHHHHHHHHH
Q 019500 272 GLTAPPGRRMGHAGVDVYTIFGSAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGAAMLEVFK 334 (340)
Q Consensus 272 Grs~~~g~~~sHtg~~~~~~~~~ala~~~~g~~~~~~a~~~qaGvv~v~~~~el~~~~~~~~~ 334 (340)
||+++.|+++|||| |+++++.|++++|+++|||+|++++++++||+|+++++++
T Consensus 240 G~~~~~g~~~sHtg---------al~~~~~g~~~~~~aa~~~aGv~~~~~~~el~~~~~~~~~ 293 (294)
T 2yv1_A 240 GQSAPEGKRMGHAG---------AIVEKGKGTAESKMKALEEAGAYVAKNISDIPKLLAGILG 293 (294)
T ss_dssp CC----------------------------CCHHHHHHHHHHHTCEECSSTTHHHHHHHHHHC
T ss_pred cCCCCccccCCchh---------hhccCCCCCHHHHHHHHHHCCCeEeCCHHHHHHHHHHHhc
Confidence 99995588899999 9987777999999999999999999999999999998874
No 5
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=100.00 E-value=6.9e-70 Score=517.66 Aligned_cols=285 Identities=65% Similarity=1.057 Sum_probs=263.8
Q ss_pred ccCcCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChhhHHHHH
Q 019500 37 VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAI 116 (340)
Q Consensus 37 lf~p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v 116 (340)
+|.++.++|+|+|+||++|+.+++++.++|++++++|||+..|+++.|+|+|+|++|+++++++|++++|+|++.+++++
T Consensus 2 ~~~~~~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~g~~~~G~~vy~sl~el~~~~~~D~viI~tP~~~~~~~~ 81 (288)
T 2nu8_A 2 ILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSI 81 (288)
T ss_dssp CSCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCGGGHHHHH
T ss_pred eecCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcccceeCCeeccCCHHHHhhcCCCCEEEEecCHHHHHHHH
Confidence 56677899999999999999999999999999999999986556899999999999999744599999999999999999
Q ss_pred HHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCCCCcccCC-CcccccCCCCCCCCCcEEEEecChHHHHH
Q 019500 117 LEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPG-ECKIGIMPGYIHKPGRIGIVSRSGTLTYE 195 (340)
Q Consensus 117 ~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc~Gi~~p~-~~~~~~~~~~~~~~G~valvSQSG~l~~~ 195 (340)
++|+++|++.+|++|+||++++.+++.+.+ +++|++++||||+|++||. +++ +++|...++||+||+|||||+++++
T Consensus 82 ~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A-~~~gv~liGPNc~Gi~~p~~~~~-~~~~~~~~~~G~i~~vsqSG~l~~~ 159 (288)
T 2nu8_A 82 LEAIDAGIKLIITITEGIPTLDMLTVKVKL-DEAGVRMIGPNTPGVITPGECKI-GIQPGHIHKPGKVGIVSRSGTLTYE 159 (288)
T ss_dssp HHHHHTTCSEEEECCCCCCHHHHHHHHHHH-HHHTCEEECSSCCEEEETTTEEE-ESSCTTSCCEEEEEEEESCHHHHHH
T ss_pred HHHHHCCCCEEEEECCCCCHHHHHHHHHHH-HHcCCEEEecCCcceecCCccee-EecccCCCCCCCEEEEECcHHHHHH
Confidence 999999999999999999998888888876 7899999999999999998 444 4566666889999999999999999
Q ss_pred HHHHHHhCCCCceEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEccCCCcHHHHHHHHHHhCCCCCEEEEEeCCCC
Q 019500 196 AVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESGTEKPIVAFIAGLTA 275 (340)
Q Consensus 196 ~~~~~~~~giG~S~~vs~Gn~a~~dv~~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~~f~~a~r~~KPVvvlk~Grs~ 275 (340)
+++|+.++|+|||++||+||+++.|+++.|+|+||.+||+|++|+||+|++|++++++++|+++ +++||||++|+||++
T Consensus 160 ~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~l~~D~~t~~I~l~~E~~~~~~~~~~~~~~~-~~~KPVv~~k~G~~~ 238 (288)
T 2nu8_A 160 AVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKE-HVTKPVVGYIAGVTA 238 (288)
T ss_dssp HHHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHHHHHHHHHHH-HCCSCEEEEEECTTC
T ss_pred HHHHHHhcCCCEEEEEeeCCCcCCCCCHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHh-cCCCCEEEEEeCCCC
Confidence 9999999999999999999998778999999999999999999999999999999999999998 589999999999999
Q ss_pred CCCCcccccCcccccccccceecCCCCcHHHHHHHHHHcCCeecCCHHHHHHHHHHHH
Q 019500 276 PPGRRMGHAGVDVYTIFGSAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGAAMLEVF 333 (340)
Q Consensus 276 ~~g~~~sHtg~~~~~~~~~ala~~~~g~~~~~~a~~~qaGvv~v~~~~el~~~~~~~~ 333 (340)
+.|+++|||| |+++++.|++++|+++|||+|+++++|++||+|+++.+|
T Consensus 239 ~~g~~~~Htg---------a~~~~~~g~~~~~~aa~~~aGv~~~~~~~el~~~~~~~~ 287 (288)
T 2nu8_A 239 PKGKRMGHAG---------AIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL 287 (288)
T ss_dssp CTTCCCSSTT---------CCCCTTCCCHHHHHHHHHHTTCEECSSGGGHHHHHHHHC
T ss_pred cccccccchh---------hhhccCCccHHHHHHHHHHCCCeEeCCHHHHHHHHHHHh
Confidence 5488899999 998877899999999999999999999999999999765
No 6
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=100.00 E-value=1.7e-64 Score=488.53 Aligned_cols=283 Identities=29% Similarity=0.477 Sum_probs=231.4
Q ss_pred ccCcCCeEEEEeCCCCCcchHHHHHHHHcC-------CeEEEeeCCCCCC--ceec------CcccccCHHHhhccC-CC
Q 019500 37 VFVDKNTRVICQGITGKNGTFHTEQAIEYG-------TKMVGGVTPKKGG--TEHL------GLPVFNTVAEAKAET-KA 100 (340)
Q Consensus 37 lf~p~~iaViVvGasgk~G~~v~~~l~~~G-------~~vv~~VnP~~~g--~~i~------G~p~y~sl~dip~~~-~v 100 (340)
.|.+++++|+|.|++|| +.+++++++ .+++++|||+.+| +++. |+|+|+|++|+++++ ++
T Consensus 5 ~l~~~~tkviV~G~~Gk----~~~~ml~~~~~~~r~~~~vVagV~P~~~g~~~~v~~G~~~~Gvpvy~sv~ea~~~~p~~ 80 (334)
T 3mwd_B 5 TLFSRHTKAIVWGMQTR----AVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIPVFKNMADAMRKHPEV 80 (334)
T ss_dssp CCCCTTCCEEEESCCHH----HHHHHHHHHHHTTCSSCSEEEEECTTSCSEEEEEEETTEEEEEEEESSHHHHHHHCTTC
T ss_pred cccCCCCeEEEECCchH----HHHHHHHhcccccCCCceEEEEEcCCCCCccceEeccCccCCceeeCCHHHHhhcCCCC
Confidence 34567889999999866 456666664 6799999999864 4553 899999999998754 48
Q ss_pred cEEEEecChhhHHHHHHHHHH-cCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCCCCcccCCCcccc--------
Q 019500 101 NASAIYVPPPFAAAAILEAME-AELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPGECKIG-------- 171 (340)
Q Consensus 101 Dlavi~vp~~~v~~~v~ea~~-~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc~Gi~~p~~~~~~-------- 171 (340)
|++|+|+|+..+.+.+.++++ +|++.++++|+||+|++++++.+++ +++|+|++||||+|++||+...++
T Consensus 81 DlaVi~vp~~~a~~ai~ea~~~~Gv~~vViiT~G~~e~~~~~l~~~a-~~~g~rliGPNc~Gii~p~~~~ig~~~~~~~a 159 (334)
T 3mwd_B 81 DVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIKKA-DQKGVTIIGPATVGGIKPGCFKIGNTGGMLDN 159 (334)
T ss_dssp CEEEECCCTTTHHHHHHHHTTSTTCCEEEECCSCCCHHHHHHHHHHH-HHHTCEEECSSCCCEEETTTEECTTTTCSHHH
T ss_pred cEEEEecCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH-HHcCCEEEccCCccccCcchhhcccccccccc
Confidence 999999999999877766666 9999999999999998888888876 889999999999999999622111
Q ss_pred cCCCCCCCCCcEEEEecChHHHHHHHHHHHhCCCCceEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEccCCCcHH
Q 019500 172 IMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEIGGTAEE 251 (340)
Q Consensus 172 ~~~~~~~~~G~valvSQSG~l~~~~~~~~~~~giG~S~~vs~Gn~a~~dv~~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~ 251 (340)
++|...++||+||||||||++++++++|+.++|+|||++||+||+.+.|+++.|+|+||.+||+|++|+||+|..|. .
T Consensus 160 ~~~~~~~~~G~vgivSqSG~l~~~i~~~~~~~g~G~S~~VsiGn~~~~d~~~~D~l~~~~~Dp~T~~I~l~gEi~g~--~ 237 (334)
T 3mwd_B 160 ILASKLYRPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGT--E 237 (334)
T ss_dssp HHHTTTTSCCSEEEEESCHHHHHHHHHHHHHHSSCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSS--H
T ss_pred cccccCCCCCCEEEEeCchHHHHHHHHHHHhcCCCeEEEEECCCCccCCCCHHHHHHHHhcCCCCCEEEEEEecCCh--H
Confidence 23445689999999999999999999999999999999999999955699999999999999999999999887764 4
Q ss_pred HHHHHHHHhC---CCCCEEEEEeCCCCCC---CCcccccCcccccccccceecCCCCcHHHHHHHHHHcCCeecCCHHHH
Q 019500 252 DAAALIKESG---TEKPIVAFIAGLTAPP---GRRMGHAGVDVYTIFGSAIVSGGKGTAQDKIKTLREAGVTVVESPAKI 325 (340)
Q Consensus 252 ~~~~f~~a~r---~~KPVvvlk~Grs~~~---g~~~sHtg~~~~~~~~~ala~~~~g~~~~~~a~~~qaGvv~v~~~~el 325 (340)
+ ++|++.+| ++||||+||+|||++. ++++|||| |++.++.|++++|+++|||+|+++++|++||
T Consensus 238 e-~~~~~~~r~~~~~KPVV~~kaGrs~~~~g~~aa~sHtG---------alag~~~~~a~~~~aa~~~aGv~~v~~~~el 307 (334)
T 3mwd_B 238 E-YKICRGIKEGRLTKPIVCWCIGTCATMFSSEVQFGHAG---------ACANQASETAVAKNQALKEAGVFVPRSFDEL 307 (334)
T ss_dssp H-HHHHHHHHTTSCCSCEEEEEECTTCC-------------------------CGGGSHHHHHHHHHHTTCBCCSSGGGH
T ss_pred H-HHHHHHHHhhcCCCCEEEEEcCCCcccccccccccchh---------hhccCCCccHHHHHHHHHHcCCeEcCCHHHH
Confidence 5 77887765 7999999999999973 44589999 9985444555599999999999999999999
Q ss_pred HHHHHHHHHhc
Q 019500 326 GAAMLEVFKQR 336 (340)
Q Consensus 326 ~~~~~~~~~~~ 336 (340)
+|++++++++|
T Consensus 308 ~~~~~~~~~~l 318 (334)
T 3mwd_B 308 GEIIQSVYEDL 318 (334)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988754
No 7
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=100.00 E-value=4.8e-64 Score=505.06 Aligned_cols=270 Identities=22% Similarity=0.341 Sum_probs=231.6
Q ss_pred CcccccCcCCeEEEEeCCCCC---cchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecCh
Q 019500 33 PAPAVFVDKNTRVICQGITGK---NGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPP 109 (340)
Q Consensus 33 ~l~~lf~p~~iaViVvGasgk---~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~ 109 (340)
+|++||.|++++|+ |+|++ +|+.+.++|+++|...++||||++ ++++|+|||+|++|+|+ ++|+++|++|+
T Consensus 1 ~l~~l~~p~siAVv--Gas~~~~~~g~~v~~~l~~~g~~~v~pVnP~~--~~i~G~~~y~sl~~lp~--~~Dlavi~vp~ 74 (457)
T 2csu_A 1 MLDYFFNPKGIAVI--GASNDPKKLGYEVFKNLKEYKKGKVYPVNIKE--EEVQGVKAYKSVKDIPD--EIDLAIIVVPK 74 (457)
T ss_dssp CCCTTTSCSEEEEE--TCCSCTTSHHHHHHHHHTTCCSSEEEEECSSC--SEETTEECBSSTTSCSS--CCSEEEECSCH
T ss_pred ChhHhcCCCeEEEE--CcCCCCCchHHHHHHHHHHcCCCEEEEECCCC--CeECCEeccCCHHHcCC--CCCEEEEecCH
Confidence 47899999998766 99975 488999999998722677999997 89999999999999998 59999999999
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCChhh------HHHHHHHHhccCCcEEEccCCCCcccCC-CcccccCCCCCCCCCc
Q 019500 110 PFAAAAILEAMEAELDLVVCITEGIPQHD------MVRVKAALNNQSKTRLVGPNCPGVIKPG-ECKIGIMPGYIHKPGR 182 (340)
Q Consensus 110 ~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~------~~~l~~~aar~~girviGPNc~Gi~~p~-~~~~~~~~~~~~~~G~ 182 (340)
+.+++++++|+++|+|.+|++|+||+|.+ .+++.+++ +++|++++||||+|++||. +++++|.|.. +. |+
T Consensus 75 ~~~~~~v~e~~~~Gi~~vv~~s~G~~e~g~~g~~~~~~l~~~a-~~~g~~viGPnc~Gv~~~~~~~~~~~~~~~-~~-G~ 151 (457)
T 2csu_A 75 RFVKDTLIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIA-HKYGMRIIGPNCVGIMNTHVDLNATFITVA-KK-GN 151 (457)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCSSTTSCHHHHHHHHHHHHHH-HHHTCEEECSSCCEEEEGGGTEEEESSCCC-EE-CS
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCccccccHHHHHHHHHHH-HHcCCEEEcCCcceEEccCCCceeeecCCC-CC-CC
Confidence 99999999999999999999999998743 44566665 8899999999999999999 8999998764 34 99
Q ss_pred EEEEecChHHHHHHHHHHHhCCCCceEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEccCCCcHHHHHHHHHHhC-
Q 019500 183 IGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESG- 261 (340)
Q Consensus 183 valvSQSG~l~~~~~~~~~~~giG~S~~vs~Gn~a~~dv~~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~~f~~a~r- 261 (340)
||||||||++++++++|+.++|+|||++||+||++ |+++.|+|+||.+||+|++|+||+|+ +.|+++|++++|
T Consensus 152 v~~vsqSG~~~~~~~~~~~~~g~G~s~~vs~G~~~--~~~~~d~l~~~~~D~~t~~I~l~~E~----i~~~~~f~~~a~~ 225 (457)
T 2csu_A 152 VAFISQSGALGAGIVYKTIKEDIGFSKFISVGNMA--DVDFAELMEYLADTEEDKAIALYIEG----VRNGKKFMEVAKR 225 (457)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCEESEEEECTTCC--SSCHHHHHHHHTTCSSCCEEEEEESC----CSCHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHhcCCCeeEEEECCCcC--CCCHHHHHHHHhcCCCCCEEEEEEec----CCCHHHHHHHHHH
Confidence 99999999999999999999999999999999998 99999999999999999999999998 457899999886
Q ss_pred --CCCCEEEEEeCCCCCCCCc--ccccCcccccccccceecCCCCcHHHHHHHHHHcCCeecCCHHHHHHHHHH
Q 019500 262 --TEKPIVAFIAGLTAPPGRR--MGHAGVDVYTIFGSAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGAAMLE 331 (340)
Q Consensus 262 --~~KPVvvlk~Grs~~~g~~--~sHtg~~~~~~~~~ala~~~~g~~~~~~a~~~qaGvv~v~~~~el~~~~~~ 331 (340)
++||||++|+||+++ |++ +|||| +|+ |++++|+++|||+|++++++++|+.+..+.
T Consensus 226 ~~~~KPVv~~k~G~~~~-g~~aa~~Htg---------ala----g~~~~~~AafRqaGv~~v~~~~El~~~~~~ 285 (457)
T 2csu_A 226 VTKKKPIIALKAGKSES-GARAASSHTG---------SLA----GSWKIYEAAFKQSGVLVANTIDEMLSMARA 285 (457)
T ss_dssp HHHHSCEEEEECC--------------------------------CHHHHHHHHHHTTCEEESSHHHHHHHHTT
T ss_pred hcCCCCEEEEEcCCCcc-ccchhhcccC---------ccC----CcHHHHHHHHHhCCCeEECCHHHHHHHHHH
Confidence 789999999999999 776 69999 998 999999999999999999999999998764
No 8
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.4e-60 Score=502.70 Aligned_cols=286 Identities=30% Similarity=0.478 Sum_probs=236.7
Q ss_pred ccCcCCeEEEEeCCCCCcchHHHHHHHHcC-------CeEEEeeCCCCCC--cee------cCcccccCHHHhhccC-CC
Q 019500 37 VFVDKNTRVICQGITGKNGTFHTEQAIEYG-------TKMVGGVTPKKGG--TEH------LGLPVFNTVAEAKAET-KA 100 (340)
Q Consensus 37 lf~p~~iaViVvGasgk~G~~v~~~l~~~G-------~~vv~~VnP~~~g--~~i------~G~p~y~sl~dip~~~-~v 100 (340)
.|.+++++|+|.|++|+ +.++|+++| .+++++|||+.+| .++ .|+|||+|++|+|+++ ++
T Consensus 491 ~l~~~~trviV~G~tg~----~~~~ml~~~~~~~~~~~~vVa~V~P~~~g~~~~~~~G~~~~Gvp~y~sv~ea~~~~p~~ 566 (829)
T 3pff_A 491 TLFSRHTKAIVWGMQTR----AVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIPVFKNMADAMRKHPEV 566 (829)
T ss_dssp CCCCTTCCEEEESCCHH----HHHHHHHHHHHTTCSSCSEEEEECTTSCSEEEEEEETTEEEEEEEESSHHHHHHHCTTC
T ss_pred eeecCCCeEEEECCcHH----HHHHHHHhcccccCCCCcEEEEEcCCCCCccceEEecCCcCCcccCCcHHHHhhccCCC
Confidence 44577899999999865 678888876 4699999999864 234 4799999999998753 48
Q ss_pred cEEEEecChhhHHHHHHHHHH-cCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCCCCcccCCCcccc--------
Q 019500 101 NASAIYVPPPFAAAAILEAME-AELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPGECKIG-------- 171 (340)
Q Consensus 101 Dlavi~vp~~~v~~~v~ea~~-~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc~Gi~~p~~~~~~-------- 171 (340)
|++||++|+..+++++++|++ +|++.+|++|+||+|.+++++.+++ +++|+|++||||+|++||+...++
T Consensus 567 DlaVI~vP~~~v~~av~ea~~~~Gvk~~Viis~Gf~e~~~~~l~~~A-~~~g~rliGPNc~Gii~p~~~~ig~~~g~lna 645 (829)
T 3pff_A 567 DVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIKKA-DQKGVTIIGPATVGGIKPGCFKIGNTGGMLDN 645 (829)
T ss_dssp CEEEECCCTTTHHHHHHHHTTSTTCCEEEECCSCCCHHHHHHHHHHH-HHHTCEEECSSCCCEEETTTEECTTTTCSHHH
T ss_pred cEEEEeCCHHHHHHHHHHHHhhCCCCEEEEeCCCCCHHHHHHHHHHH-HHcCCEEEcCCCcccCcccccccccccccccc
Confidence 999999999999999999999 9999999999999999888888876 889999999999999999832233
Q ss_pred cCCCCCCCCCcEEEEecChHHHHHHHHHHHhCCCCceEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEccCCCcHH
Q 019500 172 IMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEIGGTAEE 251 (340)
Q Consensus 172 ~~~~~~~~~G~valvSQSG~l~~~~~~~~~~~giG~S~~vs~Gn~a~~dv~~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~ 251 (340)
++|...++||+||||||||++++++++|+.++|+|||++||+||+++.|+++.|+|+||.+||+|++|+||+|..|..+.
T Consensus 646 ~~~~~~~~~G~VgiVSqSGal~~~i~~~~~~~g~G~S~~VsiGnd~~~d~~~~D~L~~l~~Dp~T~~Ivly~Ei~g~~f~ 725 (829)
T 3pff_A 646 ILASKLYRPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEY 725 (829)
T ss_dssp HHHTTTTSCCSEEEEESCHHHHHHHHHHHHHHSSCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHHH
T ss_pred ccccccCCCCcEEEEechhHHHHHHHHHHHHcCCCeEEEEecCCCCCCCCCHHHHHHHHhhCCCCCEEEEEEecCchHHH
Confidence 34555689999999999999999999999999999999999999976799999999999999999999999997555444
Q ss_pred HHHHHHHHhCCCCCEEEEEeCCCCCC---CCcccccCcccccccccceecCCCCcHHHHHHHHHHcCCeecCCHHHHHHH
Q 019500 252 DAAALIKESGTEKPIVAFIAGLTAPP---GRRMGHAGVDVYTIFGSAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGAA 328 (340)
Q Consensus 252 ~~~~f~~a~r~~KPVvvlk~Grs~~~---g~~~sHtg~~~~~~~~~ala~~~~g~~~~~~a~~~qaGvv~v~~~~el~~~ 328 (340)
++.++++..+++||||++|+|||++. ++++|||| |++.++.|++++|+++|||+|+++++|++||+++
T Consensus 726 ~aA~~~~~~~~~KPVVa~kaGrsa~~~~~~~~~sHtG---------Alag~~~~ta~~~~aa~r~aGvi~v~~~~el~~~ 796 (829)
T 3pff_A 726 KICRGIKEGRLTKPIVCWCIGTCATMFSSEVQFGHAG---------ACANQASETAVAKNQALKEAGVFVPRSFDELGEI 796 (829)
T ss_dssp HHHHHHHTTSCCSCEEEEEECSSTTC------------------------CGGGSHHHHHHHHHHTTCBCCSSGGGHHHH
T ss_pred HHHHHHHhccCCCCEEEEEecCcCccccccccccccc---------ccccCCcccHHHHHHHHHHcCCeEcCCHHHHHHH
Confidence 44444443247899999999999993 56689999 9985555566799999999999999999999999
Q ss_pred HHHHHHhc
Q 019500 329 MLEVFKQR 336 (340)
Q Consensus 329 ~~~~~~~~ 336 (340)
++.++++|
T Consensus 797 ~~~~~~~l 804 (829)
T 3pff_A 797 IQSVYEDL 804 (829)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988754
No 9
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=100.00 E-value=2.2e-47 Score=384.33 Aligned_cols=209 Identities=21% Similarity=0.331 Sum_probs=184.4
Q ss_pred Cccc---ccCHHHhhccCCCcEEEEecChhhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCCC
Q 019500 84 GLPV---FNTVAEAKAETKANASAIYVPPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCP 160 (340)
Q Consensus 84 G~p~---y~sl~dip~~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc~ 160 (340)
++|+ |+++.++|+ .+|++||++|++.+++++++|+++|+| +||+|+||+.++++++.+++ +++|+|++||||
T Consensus 20 ~~Pv~~~~~~~~~~p~--~~DlavI~vPa~~v~~~v~e~~~~Gv~-~viis~Gf~~~~~~~l~~~A-~~~g~rliGPNc- 94 (480)
T 3dmy_A 20 ALTQVRRWDSACQKLP--DANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRA-REKGLLVMGPDC- 94 (480)
T ss_dssp CCEEESSHHHHHHHST--TCCEEEECSCHHHHHHHHHHHHHTTCE-EEECCCCCCHHHHHHHHHHH-HHTTCCEECSSC-
T ss_pred CCcccchHHHHHhcCC--CCCEEEEecCHHHHHHHHHHHHhcCCC-EEEECCCCCHHHHHHHHHHH-HHcCCEEEecCc-
Confidence 5555 556666665 599999999999999999999999999 78999999988788888876 889999999999
Q ss_pred CcccCCCcccccCCCCCCCCCcEEEEecChHHHHHHHHHHHhCCCCceEEeecCCCC----CCCCCHHHHHHHhhcCCCc
Q 019500 161 GVIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDP----FNGTNFVDCVTKFIADPQT 236 (340)
Q Consensus 161 Gi~~p~~~~~~~~~~~~~~~G~valvSQSG~l~~~~~~~~~~~giG~S~~vs~Gn~a----~~dv~~~d~l~~l~~Dp~T 236 (340)
|++|+.+++++|.+. .++|+||||||||++++++++|+.++|+|||++||+||+. +.|+++.|+|+||.+||+|
T Consensus 95 G~~~~~~~~~~f~~~--~~~G~vaivSqSGal~~~i~~~~~~~g~G~S~~Vs~Gn~~l~~~i~dv~~~D~l~~l~~Dp~T 172 (480)
T 3dmy_A 95 GTSMIAGTPLAFANV--MPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKS 172 (480)
T ss_dssp CEEEETTEEEESCCC--CCEEEEEEEESCSHHHHHHHHHHHHTTCCEEEEEECCTTTTSTTTTTHHHHHHHHHHHTCTTC
T ss_pred cccccCCccccccCC--CCCCCEEEEeccHHHHHHHHHHHHHcCCCceEEEEcCCCccccccCCCCHHHHHHHHhcCCCC
Confidence 888877777777654 5699999999999999999999999999999999999992 1399999999999999999
Q ss_pred cEEEEEEccCCCcHHHHHHHHHHhC-CCCCEEEEEeCCCCCCCCcccccCcccccccccceecCCCCcHHHHHHHHHHcC
Q 019500 237 EGIILIGEIGGTAEEDAAALIKESG-TEKPIVAFIAGLTAPPGRRMGHAGVDVYTIFGSAIVSGGKGTAQDKIKTLREAG 315 (340)
Q Consensus 237 ~~I~ly~E~~g~~~~~~~~f~~a~r-~~KPVvvlk~Grs~~~g~~~sHtg~~~~~~~~~ala~~~~g~~~~~~a~~~qaG 315 (340)
++|++|+|+.. +...++|++++| ++||||++|+||++. | |||+|
T Consensus 173 ~~I~ly~E~~~--e~~~~~f~~~ar~~~KPVV~~k~Grs~~-------------------------g--------~r~~G 217 (480)
T 3dmy_A 173 EVLAFVSKPPA--EAVRLKIVNAMKATGKPTVALFLGYTPA-------------------------V--------ARDEN 217 (480)
T ss_dssp CEEEEEESCCC--HHHHHHHHHHHHHHCSCEEEEETTCCCS-------------------------S--------SEETT
T ss_pred CEEEEEEecCC--cHHHHHHHHHHHhCCCCEEEEEeCCCCc-------------------------c--------cccCC
Confidence 99999999742 334589999886 899999999999887 4 78999
Q ss_pred CeecCCHHHHHHHHHHHHH
Q 019500 316 VTVVESPAKIGAAMLEVFK 334 (340)
Q Consensus 316 vv~v~~~~el~~~~~~~~~ 334 (340)
+++|+|++||+++++.+..
T Consensus 218 virv~~~~el~~~a~~l~~ 236 (480)
T 3dmy_A 218 VWFASSLDEAARLACLLSR 236 (480)
T ss_dssp EEEESSHHHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHhc
Confidence 9999999999999987543
No 10
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=99.92 E-value=1e-25 Score=192.23 Aligned_cols=123 Identities=20% Similarity=0.292 Sum_probs=106.4
Q ss_pred ccccc-CcCCeEEEEeCCC---CCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecCh
Q 019500 34 APAVF-VDKNTRVICQGIT---GKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPP 109 (340)
Q Consensus 34 l~~lf-~p~~iaViVvGas---gk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~ 109 (340)
|++|| .|++++|+ |+| +++|+.++++|++.||+ +++|||+..++++.|+|+|+|++|+|+ ++|++++++|+
T Consensus 6 l~~ll~~p~~vaVv--Gas~~~g~~G~~~~~~l~~~G~~-v~~vnp~~~~~~i~G~~~~~sl~el~~--~vDlavi~vp~ 80 (140)
T 1iuk_A 6 LRAYLSQAKTIAVL--GAHKDPSRPAHYVPRYLREQGYR-VLPVNPRFQGEELFGEEAVASLLDLKE--PVDILDVFRPP 80 (140)
T ss_dssp HHHHHHHCCEEEEE--TCCSSTTSHHHHHHHHHHHTTCE-EEEECGGGTTSEETTEECBSSGGGCCS--CCSEEEECSCH
T ss_pred HHHHHcCCCEEEEE--CCCCCCCChHHHHHHHHHHCCCE-EEEeCCCcccCcCCCEEecCCHHHCCC--CCCEEEEEeCH
Confidence 88899 88887666 999 56788999999999998 779999943389999999999999998 59999999999
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCCCCcccCC
Q 019500 110 PFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPG 166 (340)
Q Consensus 110 ~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc~Gi~~p~ 166 (340)
+.+++++++|+++|++.+| +++|+.++ ++.+++ +++|++++||||+|+++|.
T Consensus 81 ~~~~~v~~~~~~~gi~~i~-~~~g~~~~---~~~~~a-~~~Gir~vgpnc~g~~~~~ 132 (140)
T 1iuk_A 81 SALMDHLPEVLALRPGLVW-LQSGIRHP---EFEKAL-KEAGIPVVADRCLMVEHKR 132 (140)
T ss_dssp HHHTTTHHHHHHHCCSCEE-ECTTCCCH---HHHHHH-HHTTCCEEESCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEE-EcCCcCHH---HHHHHH-HHcCCEEEcCCccceEChh
Confidence 9999999999999999865 67777643 344554 7899999999999999986
No 11
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=99.92 E-value=3e-25 Score=190.36 Aligned_cols=124 Identities=16% Similarity=0.217 Sum_probs=107.8
Q ss_pred CcccccC-cCCeEEEEeCCC---CCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecC
Q 019500 33 PAPAVFV-DKNTRVICQGIT---GKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVP 108 (340)
Q Consensus 33 ~l~~lf~-p~~iaViVvGas---gk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp 108 (340)
+|++||. |++++|+ |+| +++|+.++++|++.||+ +++|||+..|+++.|.++|+|++|+++ .+|++++++|
T Consensus 5 ~l~~ll~~p~~IavI--Gas~~~g~~G~~~~~~L~~~G~~-v~~vnp~~~g~~i~G~~~~~sl~el~~--~~Dlvii~vp 79 (145)
T 2duw_A 5 DIAGILTSTRTIALV--GASDKPDRPSYRVMKYLLDQGYH-VIPVSPKVAGKTLLGQQGYATLADVPE--KVDMVDVFRN 79 (145)
T ss_dssp SHHHHHHHCCCEEEE--SCCSCTTSHHHHHHHHHHHHTCC-EEEECSSSTTSEETTEECCSSTTTCSS--CCSEEECCSC
T ss_pred HHHHHHhCCCEEEEE--CcCCCCCChHHHHHHHHHHCCCE-EEEeCCcccccccCCeeccCCHHHcCC--CCCEEEEEeC
Confidence 4899996 9887766 998 57888999999999998 669999986678999999999999997 5999999999
Q ss_pred hhhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCCCCcccCC
Q 019500 109 PPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPG 166 (340)
Q Consensus 109 ~~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc~Gi~~p~ 166 (340)
++.+++++++|+++|++.+|+.++.+ .+++.+++ +++|++++||||+|+++|.
T Consensus 80 ~~~v~~v~~~~~~~g~~~i~i~~~~~----~~~l~~~a-~~~Gi~~igpnc~g~~~~~ 132 (145)
T 2duw_A 80 SEAAWGVAQEAIAIGAKTLWLQLGVI----NEQAAVLA-REAGLSVVMDRCPAIELPR 132 (145)
T ss_dssp STHHHHHHHHHHHHTCCEEECCTTCC----CHHHHHHH-HTTTCEEECSCCHHHHSTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCChH----HHHHHHHH-HHcCCEEEcCCeeeEEccc
Confidence 99999999999999999977665444 23455555 7899999999999999997
No 12
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=99.91 E-value=1e-24 Score=186.80 Aligned_cols=121 Identities=16% Similarity=0.236 Sum_probs=105.1
Q ss_pred cccccC-cCCeEEEEeCCC---CCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecCh
Q 019500 34 APAVFV-DKNTRVICQGIT---GKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPP 109 (340)
Q Consensus 34 l~~lf~-p~~iaViVvGas---gk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~ 109 (340)
|+.||. |++++|+ |+| +++|+.++++|++.||+ +++|||+. +++.|+++|+|++|+|+ ++|++++++|+
T Consensus 15 l~~ll~~p~~iaVV--Gas~~~g~~G~~~~~~l~~~G~~-v~~Vnp~~--~~i~G~~~y~sl~~l~~--~vDlvvi~vp~ 87 (144)
T 2d59_A 15 IREILTRYKKIALV--GASPKPERDANIVMKYLLEHGYD-VYPVNPKY--EEVLGRKCYPSVLDIPD--KIEVVDLFVKP 87 (144)
T ss_dssp HHHHHHHCCEEEEE--TCCSCTTSHHHHHHHHHHHTTCE-EEEECTTC--SEETTEECBSSGGGCSS--CCSEEEECSCH
T ss_pred HHHHHcCCCEEEEE--ccCCCCCchHHHHHHHHHHCCCE-EEEECCCC--CeECCeeccCCHHHcCC--CCCEEEEEeCH
Confidence 889995 8877655 998 57788999999999997 67999997 89999999999999997 59999999999
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCCCCcccCC
Q 019500 110 PFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPG 166 (340)
Q Consensus 110 ~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc~Gi~~p~ 166 (340)
+.+++++++|+++|++.+| +++|+.++ ++.+++ +++|++++||||+|+++|.
T Consensus 88 ~~~~~vv~~~~~~gi~~i~-~~~g~~~~---~l~~~a-~~~Gi~vvGpnc~gv~~~~ 139 (144)
T 2d59_A 88 KLTMEYVEQAIKKGAKVVW-FQYNTYNR---EASKKA-DEAGLIIVANRCMMREHER 139 (144)
T ss_dssp HHHHHHHHHHHHHTCSEEE-ECTTCCCH---HHHHHH-HHTTCEEEESCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEE-ECCCchHH---HHHHHH-HHcCCEEEcCCchhhcchh
Confidence 9999999999999999865 77887543 444554 7899999999999999874
No 13
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=99.91 E-value=1.6e-24 Score=184.46 Aligned_cols=120 Identities=18% Similarity=0.213 Sum_probs=100.1
Q ss_pred ccccCcCCeEEEEeCCC---CCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChhh
Q 019500 35 PAVFVDKNTRVICQGIT---GKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPF 111 (340)
Q Consensus 35 ~~lf~p~~iaViVvGas---gk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~ 111 (340)
.+||.|++++|+ |+| |++|+.++++|++.||+ +++|||+. +++.|+++|+|++|+++ ++|++++++|++.
T Consensus 9 ~~l~~p~~IavI--GaS~~~g~~G~~~~~~L~~~G~~-V~~vnp~~--~~i~G~~~~~s~~el~~--~vDlvii~vp~~~ 81 (138)
T 1y81_A 9 SNSKEFRKIALV--GASKNPAKYGNIILKDLLSKGFE-VLPVNPNY--DEIEGLKCYRSVRELPK--DVDVIVFVVPPKV 81 (138)
T ss_dssp -----CCEEEEE--TCCSCTTSHHHHHHHHHHHTTCE-EEEECTTC--SEETTEECBSSGGGSCT--TCCEEEECSCHHH
T ss_pred ccccCCCeEEEE--eecCCCCCHHHHHHHHHHHCCCE-EEEeCCCC--CeECCeeecCCHHHhCC--CCCEEEEEeCHHH
Confidence 467888887666 998 56788999999999998 66999998 89999999999999998 5999999999999
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCCCCcccCC
Q 019500 112 AAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPG 166 (340)
Q Consensus 112 v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc~Gi~~p~ 166 (340)
+++++++|+++|++.+|+.++++. +++.+.+ +++|++++||||+|+++|.
T Consensus 82 v~~v~~~~~~~g~~~i~~~~~~~~----~~l~~~a-~~~Gi~~igpnc~g~~~~~ 131 (138)
T 1y81_A 82 GLQVAKEAVEAGFKKLWFQPGAES----EEIRRFL-EKAGVEYSFGRCIMVETSN 131 (138)
T ss_dssp HHHHHHHHHHTTCCEEEECTTSCC----HHHHHHH-HHHTCEEECSCCHHHHC--
T ss_pred HHHHHHHHHHcCCCEEEEcCccHH----HHHHHHH-HHCCCEEEcCCcceEEccC
Confidence 999999999999999888877653 4455554 7889999999999999986
No 14
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=99.91 E-value=1.2e-24 Score=181.73 Aligned_cols=112 Identities=19% Similarity=0.233 Sum_probs=97.2
Q ss_pred CcCCeEEEEeCCCCC---cchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChhhHHHH
Q 019500 39 VDKNTRVICQGITGK---NGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAA 115 (340)
Q Consensus 39 ~p~~iaViVvGasgk---~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~ 115 (340)
.|++++|+ |+|.+ +|+.+.++|++.||+ ++||||++ ++++|++||+|++|+|+ +|++++++|++.++++
T Consensus 3 ~p~siAVV--GaS~~~~~~g~~v~~~L~~~g~~-V~pVnP~~--~~i~G~~~y~sl~dlp~---vDlavi~~p~~~v~~~ 74 (122)
T 3ff4_A 3 AMKKTLIL--GATPETNRYAYLAAERLKSHGHE-FIPVGRKK--GEVLGKTIINERPVIEG---VDTVTLYINPQNQLSE 74 (122)
T ss_dssp CCCCEEEE--TCCSCTTSHHHHHHHHHHHHTCC-EEEESSSC--SEETTEECBCSCCCCTT---CCEEEECSCHHHHGGG
T ss_pred CCCEEEEE--ccCCCCCCHHHHHHHHHHHCCCe-EEEECCCC--CcCCCeeccCChHHCCC---CCEEEEEeCHHHHHHH
Confidence 47887766 99964 578889999999996 55999998 89999999999999995 9999999999999999
Q ss_pred HHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCCCCccc
Q 019500 116 ILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIK 164 (340)
Q Consensus 116 v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc~Gi~~ 164 (340)
+++|+++|+|. +|+++||.+++ +.+.+ +++|||++| ||+|++-
T Consensus 75 v~e~~~~g~k~-v~~~~G~~~~e---~~~~a-~~~Girvv~-nC~gv~l 117 (122)
T 3ff4_A 75 YNYILSLKPKR-VIFNPGTENEE---LEEIL-SENGIEPVI-GCTLVML 117 (122)
T ss_dssp HHHHHHHCCSE-EEECTTCCCHH---HHHHH-HHTTCEEEE-SCHHHHH
T ss_pred HHHHHhcCCCE-EEECCCCChHH---HHHHH-HHcCCeEEC-CcCeEEe
Confidence 99999999997 56999996544 44444 789999997 9999873
No 15
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=99.36 E-value=2.9e-12 Score=121.23 Aligned_cols=120 Identities=13% Similarity=0.110 Sum_probs=97.2
Q ss_pred CcCCeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCC---CCce--------ecCcccccCHHHhhccCCCcEEEEe
Q 019500 39 VDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKK---GGTE--------HLGLPVFNTVAEAKAETKANASAIY 106 (340)
Q Consensus 39 ~p~~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~---~g~~--------i~G~p~y~sl~dip~~~~vDlavi~ 106 (340)
.+++++|+|+|++|+||+.+++.+.+. ++++++.++++. .|.+ -.|+|+|.+++++.. ++|++|+|
T Consensus 18 m~~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~--~aDVvIDF 95 (288)
T 3ijp_A 18 GPGSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFS--NTEGILDF 95 (288)
T ss_dssp ---CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTT--SCSEEEEC
T ss_pred ccCCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhc--CCCEEEEc
Confidence 467899999999999999999988864 889998888653 1222 258899999999886 59999999
Q ss_pred cChhhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCC-CCcc
Q 019500 107 VPPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNC-PGVI 163 (340)
Q Consensus 107 vp~~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc-~Gi~ 163 (340)
++|+.+.+.++.|+++|++. |+.|+||++++.++|.+++ ++.+ -++.||. +|+.
T Consensus 96 T~p~a~~~~~~~~l~~Gv~v-ViGTTG~~~e~~~~L~~aa-~~~~-~~~a~N~SiGv~ 150 (288)
T 3ijp_A 96 SQPQASVLYANYAAQKSLIH-IIGTTGFSKTEEAQIADFA-KYTT-IVKSGNMSLGVN 150 (288)
T ss_dssp SCHHHHHHHHHHHHHHTCEE-EECCCCCCHHHHHHHHHHH-TTSE-EEECSCCCHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCE-EEECCCCCHHHHHHHHHHh-CcCC-EEEECCCcHHHH
Confidence 99999999999999999987 5689999988888888776 5544 3888885 5653
No 16
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=99.28 E-value=1.2e-11 Score=116.16 Aligned_cols=117 Identities=18% Similarity=0.275 Sum_probs=95.5
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCC---CCce---e----cCcccccCHHHhhccCCCcEEEEecChh
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKK---GGTE---H----LGLPVFNTVAEAKAETKANASAIYVPPP 110 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~---~g~~---i----~G~p~y~sl~dip~~~~vDlavi~vp~~ 110 (340)
+++|+|+|++|+||+.+++.+.+. ++++++.++++. .|.. + .|+++|.+++++.+ ++|++|+|++|+
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~--~~DVVIDfT~p~ 84 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCA--EADYLIDFTLPE 84 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHH--HCSEEEECSCHH
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhc--CCCEEEEcCCHH
Confidence 589999999999999999988875 788998887653 1211 1 28899999999887 499999999999
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCC-CCcc
Q 019500 111 FAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNC-PGVI 163 (340)
Q Consensus 111 ~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc-~Gi~ 163 (340)
.+.+.++.|+++|++. |+.|+||++++.++|.+++ ++.+ .++.||. +|+.
T Consensus 85 a~~~~~~~al~~G~~v-VigTTG~s~~~~~~L~~aa-~~~~-vv~a~N~s~Gv~ 135 (272)
T 4f3y_A 85 GTLVHLDAALRHDVKL-VIGTTGFSEPQKAQLRAAG-EKIA-LVFSANMSVGVN 135 (272)
T ss_dssp HHHHHHHHHHHHTCEE-EECCCCCCHHHHHHHHHHT-TTSE-EEECSCCCHHHH
T ss_pred HHHHHHHHHHHcCCCE-EEECCCCCHHHHHHHHHHh-ccCC-EEEECCCCHHHH
Confidence 9999999999999987 5689999988888888775 5544 3888885 5653
No 17
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=99.13 E-value=1.1e-10 Score=109.50 Aligned_cols=118 Identities=17% Similarity=0.217 Sum_probs=92.8
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHH-cCCeEEEeeCCCCC---Cce--------ecCcccccCHHHhhccCCCcEEEEecC
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIE-YGTKMVGGVTPKKG---GTE--------HLGLPVFNTVAEAKAETKANASAIYVP 108 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~-~G~~vv~~VnP~~~---g~~--------i~G~p~y~sl~dip~~~~vDlavi~vp 108 (340)
++++|+|+|++|+||+.+++.+.+ .++++++.+++... +.. -.|+++|.+++++.+ ++|++|+|++
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~--~~DvVIDft~ 81 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD--DFDVFIDFTR 81 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT--SCSEEEECSC
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhc--CCCEEEEcCC
Confidence 568999999999999999998775 47887766665431 111 236788888988775 5999999999
Q ss_pred hhhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccC-CCCcc
Q 019500 109 PPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPN-CPGVI 163 (340)
Q Consensus 109 ~~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPN-c~Gi~ 163 (340)
|+.+.+.++.|+++|++. ++.|+|+++++.+++.+++ ++.+ .++.|| ++|+.
T Consensus 82 p~~~~~~~~~a~~~G~~v-VigTtG~~~e~~~~L~~~a-~~~~-vv~a~N~siGvn 134 (273)
T 1dih_A 82 PEGTLNHLAFCRQHGKGM-VIGTTGFDEAGKQAIRDAA-ADIA-IVFAANFSVGVN 134 (273)
T ss_dssp HHHHHHHHHHHHHTTCEE-EECCCCCCHHHHHHHHHHT-TTSC-EEECSCCCHHHH
T ss_pred hHHHHHHHHHHHhCCCCE-EEECCCCCHHHHHHHHHhc-CCCC-EEEEecCcHHHH
Confidence 999999999999999996 6689999988887787764 5554 577888 46653
No 18
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=99.13 E-value=1e-10 Score=108.15 Aligned_cols=111 Identities=17% Similarity=0.221 Sum_probs=91.1
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChhhHHHHHHHHHH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEAME 121 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ea~~ 121 (340)
+++|+|+|+ |+||+.+.+.+.+.+.++++.++++. ..-.|+|+|.+++++. ++|++|+|++|+.+.+.++ ++
T Consensus 3 MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~--~~~~gv~v~~dl~~l~---~~DVvIDft~p~a~~~~~~--l~ 74 (243)
T 3qy9_A 3 SMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTP--KATTPYQQYQHIADVK---GADVAIDFSNPNLLFPLLD--ED 74 (243)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSC--C--CCSCBCSCTTTCT---TCSEEEECSCHHHHHHHHT--SC
T ss_pred ceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCc--cccCCCceeCCHHHHh---CCCEEEEeCChHHHHHHHH--Hh
Confidence 478999999 99999999999887448888889876 4567999999999987 3899999999999999987 88
Q ss_pred cCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCC-CCcc
Q 019500 122 AELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNC-PGVI 163 (340)
Q Consensus 122 ~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc-~Gi~ 163 (340)
+|++. |+.|+||++++.+++.+++ ++.++ ++.||. +|+.
T Consensus 75 ~g~~v-VigTTG~s~e~~~~l~~aa-~~~~v-~~a~N~S~Gv~ 114 (243)
T 3qy9_A 75 FHLPL-VVATTGEKEKLLNKLDELS-QNMPV-FFSANMSYGVH 114 (243)
T ss_dssp CCCCE-EECCCSSHHHHHHHHHHHT-TTSEE-EECSSCCHHHH
T ss_pred cCCce-EeCCCCCCHHHHHHHHHHH-hcCCE-EEECCccHHHH
Confidence 89987 5699999988888888775 55444 888885 5654
No 19
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=99.05 E-value=1.3e-09 Score=100.80 Aligned_cols=105 Identities=17% Similarity=0.216 Sum_probs=84.6
Q ss_pred eEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChhhHHHHHHHHHH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEAME 121 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ea~~ 121 (340)
++|+|+|++|+||+.+.+.+.+. ++++++.+++. .+++++... ++|++|+|++|+.+.+.++.|++
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~------------~dl~~~~~~-~~DvvIDfT~p~a~~~~~~~a~~ 67 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG------------DPLSLLTDG-NTEVVIDFTHPDVVMGNLEFLID 67 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT------------CCTHHHHHT-TCCEEEECSCTTTHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC------------CCHHHHhcc-CCcEEEEccChHHHHHHHHHHHH
Confidence 47888999999999999988865 89998888764 235565542 58999999999999999999999
Q ss_pred cCCcEEEEecCCCChhhHHHHHHHHhccC-CcE-EEccCC-CCc
Q 019500 122 AELDLVVCITEGIPQHDMVRVKAALNNQS-KTR-LVGPNC-PGV 162 (340)
Q Consensus 122 ~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~-gir-viGPNc-~Gi 162 (340)
+|++. |+.|+||++++..++.+++ ++. ++. ++.||. +|+
T Consensus 68 ~g~~~-VigTTG~~~e~~~~l~~aa-~~~~~~~vv~a~N~siGv 109 (245)
T 1p9l_A 68 NGIHA-VVGTTGFTAERFQQVESWL-VAKPNTSVLIAPNFAIGA 109 (245)
T ss_dssp TTCEE-EECCCCCCHHHHHHHHHHH-HTSTTCEEEECSCCCHHH
T ss_pred cCCCE-EEcCCCCCHHHHHHHHHHH-HhCCCCCEEEECCccHHH
Confidence 99997 5689999998887787776 444 665 788883 554
No 20
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=98.99 E-value=4.1e-10 Score=102.09 Aligned_cols=109 Identities=13% Similarity=0.176 Sum_probs=83.7
Q ss_pred CCCCCCCCC--CCccccc-CcCCeEEEEeCCCCCcchHHHHHH--HHcCCeEEEe--eCCC-CCCc-eecCccccc--CH
Q 019500 23 QSRSFTTAP--PPAPAVF-VDKNTRVICQGITGKNGTFHTEQA--IEYGTKMVGG--VTPK-KGGT-EHLGLPVFN--TV 91 (340)
Q Consensus 23 ~~~~~~~~~--~~l~~lf-~p~~iaViVvGasgk~G~~v~~~l--~~~G~~vv~~--VnP~-~~g~-~i~G~p~y~--sl 91 (340)
+.-+|+... ..+.++| ..+..+|+|+|+ |+.|+.+++.+ .+.||++++. .||+ ..|. .+.|+|+|+ ++
T Consensus 62 ~g~GY~V~~L~~~i~~~Lg~~~~~~V~IvGa-G~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~~~dL 140 (212)
T 3keo_A 62 RGFGYDVKKLMNFFAEILNDHSTTNVMLVGC-GNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTI 140 (212)
T ss_dssp TSSSEEHHHHHHHHHHHTTTTSCEEEEEECC-SHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTCCBEEEGGGH
T ss_pred CCCCEEHHHHHHHHHHHhCCCCCCEEEEECc-CHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECCeEEeCHHHH
Confidence 344666553 0123444 456789999999 99999988863 3458888876 4566 6667 799999996 45
Q ss_pred HHhhccCCCcEEEEecChhhHHHHHHHHHHcCCcEEEEecC
Q 019500 92 AEAKAETKANASAIYVPPPFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 92 ~dip~~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
+++.+++++|.+++++|....+++++.|.+.|++++|.||+
T Consensus 141 ~~~v~~~~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~nFap 181 (212)
T 3keo_A 141 NDHLIDSDIETAILTVPSTEAQEVADILVKAGIKGILSFSP 181 (212)
T ss_dssp HHHC-CCSCCEEEECSCGGGHHHHHHHHHHHTCCEEEECSS
T ss_pred HHHHHHcCCCEEEEecCchhHHHHHHHHHHcCCCEEEEcCC
Confidence 55555567999999999999999999999999999999998
No 21
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=98.78 E-value=4.2e-08 Score=93.16 Aligned_cols=116 Identities=15% Similarity=0.105 Sum_probs=88.4
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCc----eecCcccccCHHHhh--------ccCCCcEEEEecCh
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT----EHLGLPVFNTVAEAK--------AETKANASAIYVPP 109 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~----~i~G~p~y~sl~dip--------~~~~vDlavi~vp~ 109 (340)
+++|.|+|+.|.+|+.+++.+.+.+.++++.++++.... ...+.++|.+++++. +..++|+++|++|+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP~ 82 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPN 82 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSCG
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCCc
Confidence 578889999788999999999988888888888765311 234778999999987 34479999999999
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEE-EccC
Q 019500 110 PFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRL-VGPN 158 (340)
Q Consensus 110 ~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girv-iGPN 158 (340)
..+.+.+.+|+++|.+.++=-.-..+.++.+++.+++ +++|+.+ ++.|
T Consensus 83 ~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a-~~~g~~~~v~~~ 131 (312)
T 3o9z_A 83 HLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELE-ARTGRRVYTVLQ 131 (312)
T ss_dssp GGHHHHHHHHHHTTCEEEECSSSCSCHHHHHHHHHHH-HHHCCCEEECCG
T ss_pred hhhHHHHHHHHHCCCeEEEECCCCCCHHHHHHHHHHH-HHcCCEEEEEee
Confidence 9999999999999977532111134556777888776 6677654 4444
No 22
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=98.76 E-value=3.2e-08 Score=95.03 Aligned_cols=123 Identities=17% Similarity=0.161 Sum_probs=85.3
Q ss_pred cccccCc--CCeEEEEeCCCCCcchHHHHHHHH--------cCCeEEEeeCCCCCCc----eecCcc-cccCHHHhhccC
Q 019500 34 APAVFVD--KNTRVICQGITGKNGTFHTEQAIE--------YGTKMVGGVTPKKGGT----EHLGLP-VFNTVAEAKAET 98 (340)
Q Consensus 34 l~~lf~p--~~iaViVvGasgk~G~~v~~~l~~--------~G~~vv~~VnP~~~g~----~i~G~p-~y~sl~dip~~~ 98 (340)
.+.++.+ +.++|.|+|+ |.+|+.+++.+.. .++++++.++++.... +-+|++ +|.|++++.+..
T Consensus 15 ~~~~~~~~MkkirvgiIG~-G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~ 93 (393)
T 4fb5_A 15 TENLYFQSMKPLGIGLIGT-GYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADP 93 (393)
T ss_dssp ---------CCCEEEEECC-SHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCT
T ss_pred ccCccccCCCCccEEEEcC-CHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCC
Confidence 3445544 5689999999 9999988876543 2578888888765211 235664 899999998766
Q ss_pred CCcEEEEecChhhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 99 KANASAIYVPPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 99 ~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
++|+|+|++|+..+.+.+.+|+++|.+.++=-.-..+.++.+++.+++ +++|+. .+|-|
T Consensus 94 ~iDaV~IatP~~~H~~~a~~al~aGkhVl~EKPla~~~~ea~~l~~~a-~~~g~~l~vg~~ 153 (393)
T 4fb5_A 94 EVDVVSVTTPNQFHAEMAIAALEAGKHVWCEKPMAPAYADAERMLATA-ERSGKVAALGYN 153 (393)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHH-HHSSSCEEECCG
T ss_pred CCcEEEECCChHHHHHHHHHHHhcCCeEEEccCCcccHHHHHHhhhhH-HhcCCccccccc
Confidence 799999999999999999999999988633111245556777888776 666654 45544
No 23
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=98.75 E-value=3.4e-08 Score=90.16 Aligned_cols=103 Identities=14% Similarity=0.116 Sum_probs=80.6
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChhhHHHHHHHHH
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEAM 120 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ea~ 120 (340)
..++-.|+|++||||+.+.+...+.++++++.+++.. . +++ . ++|++|+|+.|+.+.+.++.|.
T Consensus 11 ~~~~~~v~Ga~GrMG~~i~~~~~~~~~elv~~id~~~--~-----------~~l-~--~~DVvIDFT~P~a~~~~~~~~~ 74 (228)
T 1vm6_A 11 HHMKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNG--V-----------EEL-D--SPDVVIDFSSPEALPKTVDLCK 74 (228)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTE--E-----------EEC-S--CCSEEEECSCGGGHHHHHHHHH
T ss_pred ccceeEEEEecCHHHHHHHHHHhCCCCEEEEEEcCCC--c-----------ccc-c--CCCEEEECCCHHHHHHHHHHHH
Confidence 3567778899999999998866667999998888643 1 222 2 4899999999999999999999
Q ss_pred HcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCC-CCc
Q 019500 121 EAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNC-PGV 162 (340)
Q Consensus 121 ~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc-~Gi 162 (340)
+.|++. |+.|+||++++.+++.+++ ++ ---++.||. +|+
T Consensus 75 ~~g~~~-ViGTTG~~~~~~~~l~~~a-~~-~~vv~apNfSlGv 114 (228)
T 1vm6_A 75 KYRAGL-VLGTTALKEEHLQMLRELS-KE-VPVVQAYNFSIGI 114 (228)
T ss_dssp HHTCEE-EECCCSCCHHHHHHHHHHT-TT-SEEEECSCCCHHH
T ss_pred HcCCCE-EEeCCCCCHHHHHHHHHHH-hh-CCEEEeccccHHH
Confidence 999997 6699999998887777654 44 334778885 665
No 24
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.75 E-value=2.5e-08 Score=95.96 Aligned_cols=128 Identities=12% Similarity=-0.011 Sum_probs=87.4
Q ss_pred CCCCCCCCCCCcccccCcCCeEEEEeCCCCCcch-HHHHHHHHc-CCeEEEeeCCCCCC-c---eecCcccccCHHHhhc
Q 019500 23 QSRSFTTAPPPAPAVFVDKNTRVICQGITGKNGT-FHTEQAIEY-GTKMVGGVTPKKGG-T---EHLGLPVFNTVAEAKA 96 (340)
Q Consensus 23 ~~~~~~~~~~~l~~lf~p~~iaViVvGasgk~G~-~v~~~l~~~-G~~vv~~VnP~~~g-~---~i~G~p~y~sl~dip~ 96 (340)
.+++|-++. -..--..+.++|.|+|+ |++|+ .+++.+.+. ++++++.++++... + +-.|++.|.+++++.+
T Consensus 10 ~~~~~~~~~--~~~~~~m~~~rigiIG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~ 86 (350)
T 3rc1_A 10 HENLYFQGH--MENPANANPIRVGVIGC-ADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLE 86 (350)
T ss_dssp ------------------CCEEEEEESC-CHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHT
T ss_pred ccceeeecc--CCCCCCCCceEEEEEcC-cHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhc
Confidence 345555442 12222335689999999 99998 688888886 78888777776410 1 2358999999999987
Q ss_pred cCCCcEEEEecChhhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEE
Q 019500 97 ETKANASAIYVPPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRL 154 (340)
Q Consensus 97 ~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girv 154 (340)
..++|+++|++|+..+.+.+.+|+++|.+.++=-.-..+.++.+++.+++ +++|+.+
T Consensus 87 ~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a-~~~g~~~ 143 (350)
T 3rc1_A 87 RDDVDAVYVPLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVA-RERGLLL 143 (350)
T ss_dssp CTTCSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHH-HHTTCCE
T ss_pred CCCCCEEEECCCcHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHH-HHhCCEE
Confidence 55799999999999999999999999987533223356667788888776 6677654
No 25
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.74 E-value=4.1e-08 Score=89.27 Aligned_cols=112 Identities=15% Similarity=0.199 Sum_probs=86.4
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChhhHHHHHHHHHHcC
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEAMEAE 123 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ea~~~G 123 (340)
+|.++|+ |+||+.+++++.+.|+++++..|+....+. .|.+++++.+ .++|++++++|++.+.+.+.+++++|
T Consensus 2 ~vgiIG~-G~mG~~~~~~l~~~g~~lv~v~d~~~~~~~-----~~~~~~~l~~-~~~DvVv~~~~~~~~~~~~~~~l~~G 74 (236)
T 2dc1_A 2 LVGLIGY-GAIGKFLAEWLERNGFEIAAILDVRGEHEK-----MVRGIDEFLQ-REMDVAVEAASQQAVKDYAEKILKAG 74 (236)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCCCTT-----EESSHHHHTT-SCCSEEEECSCHHHHHHHHHHHHHTT
T ss_pred EEEEECC-CHHHHHHHHHHhcCCCEEEEEEecCcchhh-----hcCCHHHHhc-CCCCEEEECCCHHHHHHHHHHHHHCC
Confidence 6778899 999999999988889998777776541111 7899999874 26999999999999999999999999
Q ss_pred CcEEEEecCCCCh-hhH-HHHHHHHhccCCcE-EEccCCCCccc
Q 019500 124 LDLVVCITEGIPQ-HDM-VRVKAALNNQSKTR-LVGPNCPGVIK 164 (340)
Q Consensus 124 vk~vvi~t~Gf~e-~~~-~~l~~~aar~~gir-viGPNc~Gi~~ 164 (340)
.+. ++.+++... .+. +++.+.+ +++|.. ++-+|+.|-+.
T Consensus 75 ~~v-v~~~~~~~~~~~~~~~l~~~a-~~~g~~~~i~~~~~g~~~ 116 (236)
T 2dc1_A 75 IDL-IVLSTGAFADRDFLSRVREVC-RKTGRRVYIASGAIGGLD 116 (236)
T ss_dssp CEE-EESCGGGGGSHHHHHHHHHHH-HHHCCCEEECCTTCSCHH
T ss_pred CcE-EEECcccCChHHHHHHHHHHH-HhcCCeEEecCccccChH
Confidence 875 556776543 344 6676665 666776 67888777543
No 26
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=98.73 E-value=6.4e-08 Score=92.51 Aligned_cols=113 Identities=15% Similarity=0.213 Sum_probs=88.3
Q ss_pred CCeEEEEeCCCCCcch-HHHHHHHHc-CCeEEEeeCCCCCCceecCcccccCHHHhhcc-CCCcEEEEecChhhHHHHHH
Q 019500 41 KNTRVICQGITGKNGT-FHTEQAIEY-GTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAE-TKANASAIYVPPPFAAAAIL 117 (340)
Q Consensus 41 ~~iaViVvGasgk~G~-~v~~~l~~~-G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~-~~vDlavi~vp~~~v~~~v~ 117 (340)
+.++|.|+|+ |++|+ .+++.+.+. ++++++.++++. +..|+++|.+++++.+. .++|+++|++|+..+.+.+.
T Consensus 24 ~~~rvgiiG~-G~ig~~~~~~~l~~~~~~~lvav~d~~~---~~~g~~~~~~~~~ll~~~~~vD~V~i~tp~~~H~~~~~ 99 (330)
T 4ew6_A 24 SPINLAIVGV-GKIVRDQHLPSIAKNANFKLVATASRHG---TVEGVNSYTTIEAMLDAEPSIDAVSLCMPPQYRYEAAY 99 (330)
T ss_dssp CCEEEEEECC-SHHHHHTHHHHHHHCTTEEEEEEECSSC---CCTTSEEESSHHHHHHHCTTCCEEEECSCHHHHHHHHH
T ss_pred CCceEEEEec-CHHHHHHHHHHHHhCCCeEEEEEEeCCh---hhcCCCccCCHHHHHhCCCCCCEEEEeCCcHHHHHHHH
Confidence 4589999999 99998 688888875 788888888875 35789999999999875 57999999999999999999
Q ss_pred HHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 118 EAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 118 ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
+|+++|.+.++=-.-..+.++.+++.+++ +++|+. .++.|
T Consensus 100 ~al~aGkhVl~EKP~a~~~~e~~~l~~~a-~~~g~~~~v~~~ 140 (330)
T 4ew6_A 100 KALVAGKHVFLEKPPGATLSEVADLEALA-NKQGASLFASWH 140 (330)
T ss_dssp HHHHTTCEEEECSSSCSSHHHHHHHHHHH-HHHTCCEEECCG
T ss_pred HHHHcCCcEEEeCCCCCCHHHHHHHHHHH-HhcCCeEEEEeh
Confidence 99999976533111245566777887776 566654 44433
No 27
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.71 E-value=6.4e-08 Score=92.87 Aligned_cols=117 Identities=16% Similarity=0.198 Sum_probs=90.0
Q ss_pred CcCCeEEEEeCCCCCcchHHHHHHHHc--CCeEEEeeCCCCCC-c---eecCcccccCHHHhhccCCCcEEEEecChhhH
Q 019500 39 VDKNTRVICQGITGKNGTFHTEQAIEY--GTKMVGGVTPKKGG-T---EHLGLPVFNTVAEAKAETKANASAIYVPPPFA 112 (340)
Q Consensus 39 ~p~~iaViVvGasgk~G~~v~~~l~~~--G~~vv~~VnP~~~g-~---~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v 112 (340)
..++++|.|+|+ |++|+.+++.+.+. ++++++.++++... + +-.|+++|.+++++.+..++|++++++|+..+
T Consensus 10 ~~~~~rvgiiG~-G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 88 (354)
T 3q2i_A 10 TDRKIRFALVGC-GRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSGLH 88 (354)
T ss_dssp CSSCEEEEEECC-STTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCGGGH
T ss_pred CCCcceEEEEcC-cHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCcHHH
Confidence 346789999999 99999999998886 78888888876411 1 23588999999999865579999999999999
Q ss_pred HHHHHHHHHcCCcEEEEecC-CCChhhHHHHHHHHhccCCcEE-EccC
Q 019500 113 AAAILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTRL-VGPN 158 (340)
Q Consensus 113 ~~~v~ea~~~Gvk~vvi~t~-Gf~e~~~~~l~~~aar~~girv-iGPN 158 (340)
.+.+.+|+++|.+. ++--+ ..+.++.+++.+++ +++|+.+ +|.+
T Consensus 89 ~~~~~~al~~gk~v-~~EKP~a~~~~~~~~l~~~a-~~~g~~~~v~~~ 134 (354)
T 3q2i_A 89 PTQSIECSEAGFHV-MTEKPMATRWEDGLEMVKAA-DKAKKHLFVVKQ 134 (354)
T ss_dssp HHHHHHHHHTTCEE-EECSSSCSSHHHHHHHHHHH-HHHTCCEEECCG
T ss_pred HHHHHHHHHCCCCE-EEeCCCcCCHHHHHHHHHHH-HHhCCeEEEEEc
Confidence 99999999999765 33222 55667777887776 5666553 5544
No 28
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.69 E-value=5.7e-08 Score=92.78 Aligned_cols=115 Identities=17% Similarity=0.199 Sum_probs=89.1
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCCC-c---eecCcccccCHHHhhccCCCcEEEEecChhhHHHH
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-T---EHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAA 115 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~g-~---~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~ 115 (340)
++++|.|+|+ |++|+.+++.+.+. ++++++.++++... + +-.|.++|.+++++.+..++|++++++|+..+.+.
T Consensus 3 ~~~rvgiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~ 81 (344)
T 3euw_A 3 LTLRIALFGA-GRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTSTHVDL 81 (344)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGGGHHHH
T ss_pred CceEEEEECC-cHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCchhhHHH
Confidence 4578899999 99999999998886 77888777776411 1 13578899999999875579999999999999999
Q ss_pred HHHHHHcCCcEEEEecC-CCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 116 ILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 116 v~ea~~~Gvk~vvi~t~-Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
+.+|+++|.+.++ --+ ..+.++.+++.+++ +++|+. .+|.|
T Consensus 82 ~~~al~~gk~v~~-EKP~~~~~~~~~~l~~~a-~~~g~~~~v~~~ 124 (344)
T 3euw_A 82 ITRAVERGIPALC-EKPIDLDIEMVRACKEKI-GDGASKVMLGFN 124 (344)
T ss_dssp HHHHHHTTCCEEE-CSCSCSCHHHHHHHHHHH-GGGGGGEEECCG
T ss_pred HHHHHHcCCcEEE-ECCCCCCHHHHHHHHHHH-HhcCCeEEecch
Confidence 9999999987543 333 56667778888776 666754 44443
No 29
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=98.68 E-value=1.3e-07 Score=89.90 Aligned_cols=116 Identities=10% Similarity=0.002 Sum_probs=88.2
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCc----eecCcccccCHHHhhc---------cCCCcEEEEecC
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT----EHLGLPVFNTVAEAKA---------ETKANASAIYVP 108 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~----~i~G~p~y~sl~dip~---------~~~vDlavi~vp 108 (340)
+++|.|+|+.|.+|..+++.+.+.+.++++.++++.... ...+.++|.+++++.+ ..++|+++|++|
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP 82 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSP 82 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSC
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECCC
Confidence 578889999788999999999888888888887765211 2347889999999872 347999999999
Q ss_pred hhhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 109 PPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 109 ~~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
+..+.+.+.+|+++|.+.++=-.-..+.++.+++.+++ +++|+. .+|.+
T Consensus 83 ~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a-~~~g~~~~v~~~ 132 (318)
T 3oa2_A 83 NYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIE-RETDKRLYNILQ 132 (318)
T ss_dssp GGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHH-HHHTCCEEECCG
T ss_pred cHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHH-HHhCCEEEEEEh
Confidence 99999999999999987532111145566778888776 666765 45544
No 30
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=98.68 E-value=5.9e-08 Score=92.68 Aligned_cols=117 Identities=15% Similarity=0.079 Sum_probs=85.6
Q ss_pred cCCeEEEEeCCCCCcchHH-HHHHHHc-CCeEEEeeCCCCCC-c---eecCcc-cccCHHHhhccCCCcEEEEecChhhH
Q 019500 40 DKNTRVICQGITGKNGTFH-TEQAIEY-GTKMVGGVTPKKGG-T---EHLGLP-VFNTVAEAKAETKANASAIYVPPPFA 112 (340)
Q Consensus 40 p~~iaViVvGasgk~G~~v-~~~l~~~-G~~vv~~VnP~~~g-~---~i~G~p-~y~sl~dip~~~~vDlavi~vp~~~v 112 (340)
.+++||.|+|+ |++|+.+ ...+.+. ++++++.++++... + +-+|+| +|.|++++.+..++|+|+|++|+..+
T Consensus 21 ~~mirigiIG~-G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~~~H 99 (350)
T 4had_A 21 QSMLRFGIIST-AKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPTSQH 99 (350)
T ss_dssp -CCEEEEEESC-CHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCGGGH
T ss_pred cCccEEEEEcC-hHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCCchh
Confidence 44789999999 8999764 5667665 77888888876410 1 235775 89999999876579999999999999
Q ss_pred HHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 113 AAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 113 ~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
.+.+.+|+++|.+.++=-.-..+.++.+++.+++ +++|+. .+|-|
T Consensus 100 ~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a-~~~~~~l~v~~~ 145 (350)
T 4had_A 100 IEWSIKAADAGKHVVCEKPLALKAGDIDAVIAAR-DRNKVVVTEAYM 145 (350)
T ss_dssp HHHHHHHHHTTCEEEECSCCCSSGGGGHHHHHHH-HHHTCCEEECCG
T ss_pred HHHHHHHHhcCCEEEEeCCcccchhhHHHHHHHH-HHcCCceeEeee
Confidence 9999999999987533111244556777787776 556644 45544
No 31
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.67 E-value=6.9e-08 Score=92.67 Aligned_cols=116 Identities=14% Similarity=0.140 Sum_probs=89.6
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCCC-c---eecCcccccCHHHhhccCCCcEEEEecChhhHHHH
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-T---EHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAA 115 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~g-~---~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~ 115 (340)
++++|.|+|+ |++|+.+++.+.+. ++++++.++++... + +-.|++.|.+++++.+..++|++++++|+..+.+.
T Consensus 4 ~~~~vgiiG~-G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~ 82 (354)
T 3db2_A 4 NPVGVAAIGL-GRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDKHAEV 82 (354)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTSHHHH
T ss_pred CcceEEEEcc-CHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHHHHHH
Confidence 4578899999 99999999999886 78888788876410 1 23588999999999864479999999999999999
Q ss_pred HHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 116 ILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 116 v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
+.+|+++|.+.++--.-..+.++.+++.+++ +++|+. .+|.|
T Consensus 83 ~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a-~~~~~~~~v~~~ 125 (354)
T 3db2_A 83 IEQCARSGKHIYVEKPISVSLDHAQRIDQVI-KETGVKFLCGHS 125 (354)
T ss_dssp HHHHHHTTCEEEEESSSCSSHHHHHHHHHHH-HHHCCCEEEECG
T ss_pred HHHHHHcCCEEEEccCCCCCHHHHHHHHHHH-HHcCCeEEEeec
Confidence 9999999977544323366677788887776 566654 44544
No 32
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=98.67 E-value=4.7e-08 Score=93.83 Aligned_cols=114 Identities=11% Similarity=0.034 Sum_probs=87.2
Q ss_pred CeEEEEeCCCCCcch-HHHHHHHHc-CCeEEEeeCCCCCCcee------cCcccccCHHHhhccCCCcEEEEecChhhHH
Q 019500 42 NTRVICQGITGKNGT-FHTEQAIEY-GTKMVGGVTPKKGGTEH------LGLPVFNTVAEAKAETKANASAIYVPPPFAA 113 (340)
Q Consensus 42 ~iaViVvGasgk~G~-~v~~~l~~~-G~~vv~~VnP~~~g~~i------~G~p~y~sl~dip~~~~vDlavi~vp~~~v~ 113 (340)
+++|.|+|+ |.+|+ .+.+.+.+. ++++++.++++. .+++ .|.++|.+++++.+..++|++++++|+..+.
T Consensus 2 ~~rvgiiG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~-~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~ 79 (349)
T 3i23_A 2 TVKMGFIGF-GKSANRYHLPYVMIRETLEVKTIFDLHV-NEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPAHTHY 79 (349)
T ss_dssp CEEEEEECC-SHHHHHTTHHHHTTCTTEEEEEEECTTC-CHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSCGGGHH
T ss_pred eeEEEEEcc-CHHHHHHHHHHHhhCCCeEEEEEECCCH-HHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCCcHHHH
Confidence 468889999 89987 677777665 788888888873 2444 6889999999998765799999999999999
Q ss_pred HHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 114 AAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 114 ~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
+.+.+|+++|.+.++--.-..+.++.+++.+++ +++|+. .+|.|
T Consensus 80 ~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a-~~~g~~~~v~~~ 124 (349)
T 3i23_A 80 DLAKQAILAGKSVIVEKPFCDTLEHAEELFALG-QEKGVVVMPYQN 124 (349)
T ss_dssp HHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHH-HHTTCCEEECCG
T ss_pred HHHHHHHHcCCEEEEECCCcCCHHHHHHHHHHH-HHcCCeEEEEec
Confidence 999999999976533111245567777888776 677765 44444
No 33
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.66 E-value=1.1e-07 Score=91.83 Aligned_cols=116 Identities=18% Similarity=0.256 Sum_probs=88.7
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCCCc---eecCcccccCHHHhhccCCCcEEEEecChhhHHHHH
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGT---EHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAI 116 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~g~---~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v 116 (340)
++++|.|+|+ |.+|+.+++.+.+. ++++++.++++.... .-.|+++|.+++++.+..++|+++|++|+..+.+.+
T Consensus 4 ~~~~vgiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 82 (359)
T 3e18_A 4 KKYQLVIVGY-GGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPNDSHKELA 82 (359)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGGGHHHHH
T ss_pred CcCcEEEECc-CHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcHHHHHHH
Confidence 4688999999 99999999988876 788887777764111 236889999999998755799999999999999999
Q ss_pred HHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 117 LEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 117 ~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
.+|+++|.+.++--.-..+.++.+++.+++ +++|+. .+|-|
T Consensus 83 ~~al~aGkhVl~EKP~a~~~~ea~~l~~~a-~~~g~~~~v~~~ 124 (359)
T 3e18_A 83 ISALEAGKHVVCEKPVTMTSEDLLAIMDVA-KRVNKHFMVHQN 124 (359)
T ss_dssp HHHHHTTCEEEEESSCCSSHHHHHHHHHHH-HHHTCCEEEECG
T ss_pred HHHHHCCCCEEeeCCCcCCHHHHHHHHHHH-HHhCCeEEEEee
Confidence 999999977543222255667777887776 566654 44544
No 34
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=98.66 E-value=2.5e-08 Score=90.27 Aligned_cols=109 Identities=14% Similarity=0.158 Sum_probs=83.6
Q ss_pred cCCCCCCCCCC--CCccccc-CcCCeEEEEeCCCCCcchHHHHHH--HHcCCeEEEee--CCCCCCceecCcccc--cCH
Q 019500 21 CGQSRSFTTAP--PPAPAVF-VDKNTRVICQGITGKNGTFHTEQA--IEYGTKMVGGV--TPKKGGTEHLGLPVF--NTV 91 (340)
Q Consensus 21 ~~~~~~~~~~~--~~l~~lf-~p~~iaViVvGasgk~G~~v~~~l--~~~G~~vv~~V--nP~~~g~~i~G~p~y--~sl 91 (340)
.++--+|+... ..+.++| .++..+|+|+|+ |++|+.+++.+ .. |+++++.+ ||...|..+.|+|++ .++
T Consensus 56 G~~g~gY~v~~L~~~~~~~lg~~~~~rV~IIGa-G~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl 133 (211)
T 2dt5_A 56 GTRGVGYTVPVLKRELRHILGLNRKWGLCIVGM-GRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRGGVIEHVDLL 133 (211)
T ss_dssp CCTTTCEEHHHHHHHHHHHHTTTSCEEEEEECC-SHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETTEEEEEGGGH
T ss_pred cCCceeEEhHHHHHHHHHHhCcCCCCEEEEECc-cHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhcCCeeecHHhH
Confidence 45566777531 0123333 456789999999 99999988852 23 78877765 576666788999975 467
Q ss_pred HHhhccCCCcEEEEecChhhHHHHHHHHHHcCCcEEEEecC
Q 019500 92 AEAKAETKANASAIYVPPPFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 92 ~dip~~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
+++.++ ++|.+++++|...+.++++.|.+.|++.+|++++
T Consensus 134 ~ell~~-~ID~ViIA~Ps~~~~ei~~~l~~aGi~~Ilnf~P 173 (211)
T 2dt5_A 134 PQRVPG-RIEIALLTVPREAAQKAADLLVAAGIKGILNFAP 173 (211)
T ss_dssp HHHSTT-TCCEEEECSCHHHHHHHHHHHHHHTCCEEEECSS
T ss_pred HHHHHc-CCCEEEEeCCchhHHHHHHHHHHcCCCEEEECCc
Confidence 777766 7999999999999999999999999999998886
No 35
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.66 E-value=3.1e-07 Score=87.34 Aligned_cols=116 Identities=9% Similarity=-0.000 Sum_probs=87.1
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCCC-c---eecCcc-cccCHHHhhccCCCcEEEEecChhhHHH
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-T---EHLGLP-VFNTVAEAKAETKANASAIYVPPPFAAA 114 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~g-~---~i~G~p-~y~sl~dip~~~~vDlavi~vp~~~v~~ 114 (340)
++++|.|+|+ |++|+.+++.+.+. ++++++.++++... + +-.|++ +|.+++++.+..++|++++++|+..+.+
T Consensus 4 ~~~rigiiG~-G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 82 (329)
T 3evn_A 4 SKVRYGVVST-AKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQDHYK 82 (329)
T ss_dssp -CEEEEEEBC-CTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGGGHHH
T ss_pred CceEEEEEec-hHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHH
Confidence 4678999999 99999999888775 56777777765421 1 235776 8999999987557999999999999999
Q ss_pred HHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 115 AILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 115 ~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
.+.+|+++|.+.++=-.-..+.++.+++.+++ +++|+. .+|.|
T Consensus 83 ~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a-~~~~~~~~v~~~ 126 (329)
T 3evn_A 83 VAKAALLAGKHVLVEKPFTLTYDQANELFALA-ESCNLFLMEAQK 126 (329)
T ss_dssp HHHHHHHTTCEEEEESSCCSSHHHHHHHHHHH-HHTTCCEEEECS
T ss_pred HHHHHHHCCCeEEEccCCcCCHHHHHHHHHHH-HHcCCEEEEEEc
Confidence 99999999987543222355667778888776 667765 45554
No 36
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.64 E-value=2.4e-07 Score=88.24 Aligned_cols=116 Identities=8% Similarity=-0.037 Sum_probs=89.0
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCCC-c---eecCc-ccccCHHHhhccCCCcEEEEecChhhHHH
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-T---EHLGL-PVFNTVAEAKAETKANASAIYVPPPFAAA 114 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~g-~---~i~G~-p~y~sl~dip~~~~vDlavi~vp~~~v~~ 114 (340)
+.++|.|+|+ |++|+.+++.+.+. ++++++.++++... + +-.|+ ++|.+++++.+..++|++++++|+..+.+
T Consensus 4 ~~~~igiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 82 (330)
T 3e9m_A 4 DKIRYGIMST-AQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQGHYS 82 (330)
T ss_dssp CCEEEEECSC-CTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGGGHHH
T ss_pred CeEEEEEECc-hHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCHHHHH
Confidence 4678999999 99999999999885 77888788876521 1 13577 58999999987557999999999999999
Q ss_pred HHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 115 AILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 115 ~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
.+.+|+++|.+.++--.-..+.++.+++.+++ +++|+. .+|.|
T Consensus 83 ~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a-~~~g~~~~v~~~ 126 (330)
T 3e9m_A 83 AAKLALSQGKPVLLEKPFTLNAAEAEELFAIA-QEQGVFLMEAQK 126 (330)
T ss_dssp HHHHHHHTTCCEEECSSCCSSHHHHHHHHHHH-HHTTCCEEECCS
T ss_pred HHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHH-HHcCCeEEEEEh
Confidence 99999999987643222356667778888776 667754 44444
No 37
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=98.64 E-value=1.4e-07 Score=91.03 Aligned_cols=116 Identities=13% Similarity=0.017 Sum_probs=88.9
Q ss_pred CCeEEEEeCCCCCcchH-HHHHHHHc-CCeEEEeeCCCCC--CceecCcccccCHHHhhccCCCcEEEEecChhhHHHHH
Q 019500 41 KNTRVICQGITGKNGTF-HTEQAIEY-GTKMVGGVTPKKG--GTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAI 116 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~-v~~~l~~~-G~~vv~~VnP~~~--g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v 116 (340)
++++|.|+|+ |++|+. +.+.+.+. ++++++.++++.. .++..+.++|.+++++.+..++|+++|++|+..+.+.+
T Consensus 4 ~~~rvgiiG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~ 82 (362)
T 3fhl_A 4 EIIKTGLAAF-GMSGQVFHAPFISTNPHFELYKIVERSKELSKERYPQASIVRSFKELTEDPEIDLIVVNTPDNTHYEYA 82 (362)
T ss_dssp CCEEEEESCC-SHHHHHTTHHHHHHCTTEEEEEEECSSCCGGGTTCTTSEEESCSHHHHTCTTCCEEEECSCGGGHHHHH
T ss_pred CceEEEEECC-CHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHHhCCCCceECCHHHHhcCCCCCEEEEeCChHHHHHHH
Confidence 4689999999 899986 78888776 7888888777642 12344789999999998765799999999999999999
Q ss_pred HHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 117 LEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 117 ~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
.+|+++|.+.++=-.-..+.++.+++.+++ +++|+. .+|.|
T Consensus 83 ~~al~aGkhVl~EKP~a~~~~ea~~l~~~a-~~~g~~~~v~~~ 124 (362)
T 3fhl_A 83 GMALEAGKNVVVEKPFTSTTKQGEELIALA-KKKGLMLSVYQN 124 (362)
T ss_dssp HHHHHTTCEEEEESSCCSSHHHHHHHHHHH-HHHTCCEEEECG
T ss_pred HHHHHCCCeEEEecCCCCCHHHHHHHHHHH-HHcCCEEEEEec
Confidence 999999987543222255667788888776 566655 44554
No 38
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=98.64 E-value=7.9e-08 Score=92.27 Aligned_cols=116 Identities=14% Similarity=0.104 Sum_probs=88.9
Q ss_pred cCCeEEEEeCCCCCcchH-HHHHHHHc-CCeEEEeeCCCCC--CceecCcccccCHHHhhccCCCcEEEEecChhhHHHH
Q 019500 40 DKNTRVICQGITGKNGTF-HTEQAIEY-GTKMVGGVTPKKG--GTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAA 115 (340)
Q Consensus 40 p~~iaViVvGasgk~G~~-v~~~l~~~-G~~vv~~VnP~~~--g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~ 115 (340)
.+.++|.|+|+ |.+|+. +.+.+.+. ++++++.+++... .....+.++|.+++++.+..++|+++|++|+..+.+.
T Consensus 5 ~~~~rvgiiG~-G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~ 83 (352)
T 3kux_A 5 ADKIKVGLLGY-GYASKTFHAPLIMGTPGLELAGVSSSDASKVHADWPAIPVVSDPQMLFNDPSIDLIVIPTPNDTHFPL 83 (352)
T ss_dssp TCCEEEEEECC-SHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHTTCSSCCEESCHHHHHHCSSCCEEEECSCTTTHHHH
T ss_pred cCCceEEEECC-CHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEeCChHHHHHH
Confidence 34689999999 999986 88888775 7888888777541 1234578999999999875579999999999999999
Q ss_pred HHHHHHcCCcEEEEecC-CCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 116 ILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 116 v~ea~~~Gvk~vvi~t~-Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
+.+|+++|.+. ++=-+ ..+.++.+++.+++ +++|+. .+|.|
T Consensus 84 ~~~al~aGkhV-~~EKPla~~~~e~~~l~~~a-~~~g~~~~v~~~ 126 (352)
T 3kux_A 84 AQSALAAGKHV-VVDKPFTVTLSQANALKEHA-DDAGLLLSVFHN 126 (352)
T ss_dssp HHHHHHTTCEE-EECSSCCSCHHHHHHHHHHH-HHTTCCEEECCG
T ss_pred HHHHHHCCCcE-EEECCCcCCHHHHHHHHHHH-HHcCCeEEEEee
Confidence 99999999765 33333 55667778888776 667765 44444
No 39
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.64 E-value=1e-07 Score=90.59 Aligned_cols=114 Identities=17% Similarity=0.192 Sum_probs=87.2
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCCC-c---eecCcccccCHHHhhccCCCcEEEEecChhhHHHHH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-T---EHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAI 116 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~g-~---~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v 116 (340)
+++|.|+|+ |++|+.+++.+.+. ++++++.++++... + +-.|++ |.+++++.+..++|++++++|+..+.+.+
T Consensus 3 ~~~vgiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~D~V~i~tp~~~h~~~~ 80 (331)
T 4hkt_A 3 TVRFGLLGA-GRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE-VRTIDAIEAAADIDAVVICTPTDTHADLI 80 (331)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE-ECCHHHHHHCTTCCEEEECSCGGGHHHHH
T ss_pred ceEEEEECC-CHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC-cCCHHHHhcCCCCCEEEEeCCchhHHHHH
Confidence 468889999 99999999999885 78888777876411 1 235888 99999998755699999999999999999
Q ss_pred HHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 117 LEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 117 ~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
.+|+++|.+.++--....+.++.+++.+++ +++|+. .+|.+
T Consensus 81 ~~al~~gk~v~~EKP~~~~~~~~~~l~~~a-~~~g~~~~v~~~ 122 (331)
T 4hkt_A 81 ERFARAGKAIFCEKPIDLDAERVRACLKVV-SDTKAKLMVGFN 122 (331)
T ss_dssp HHHHHTTCEEEECSCSCSSHHHHHHHHHHH-HHTTCCEEECCG
T ss_pred HHHHHcCCcEEEecCCCCCHHHHHHHHHHH-HHcCCeEEEccc
Confidence 999999976533222356677788888776 667755 44443
No 40
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=98.62 E-value=9.4e-08 Score=86.68 Aligned_cols=110 Identities=20% Similarity=0.233 Sum_probs=75.2
Q ss_pred cCCCCCCCCCC--CCccccc-CcCCeEEEEeCCCCCcchHHHHH--HHHcCCeEEEe--eCCCCCCceecCccccc--CH
Q 019500 21 CGQSRSFTTAP--PPAPAVF-VDKNTRVICQGITGKNGTFHTEQ--AIEYGTKMVGG--VTPKKGGTEHLGLPVFN--TV 91 (340)
Q Consensus 21 ~~~~~~~~~~~--~~l~~lf-~p~~iaViVvGasgk~G~~v~~~--l~~~G~~vv~~--VnP~~~g~~i~G~p~y~--sl 91 (340)
.++--+|+... ..+.++| .++.++|+|+|+ |++|+.+++. ....|+++++. .||...|..+.|+|++. ++
T Consensus 61 G~~g~gY~v~~L~~~~~~~lg~~~~~rV~IIGA-G~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl 139 (215)
T 2vt3_A 61 GKKGYGYNVDYLLSFFRKTLDQDEMTDVILIGV-GNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDL 139 (215)
T ss_dssp C-----EEHHHHHHHHHHHHHHC---CEEEECC-SHHHHHHHHCC------CCEEEEEESCTTTTTCEETTEEEEEGGGH
T ss_pred cCCcceEEhHHHHHHHHHHhCcCCCCEEEEEcc-CHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCCeeechhhH
Confidence 45556676531 0123333 345678999999 9999999984 33458887766 46766667899999875 56
Q ss_pred HHhhccCCCcEEEEecChhhHHHHHHHHHHcCCcEEEEecCC
Q 019500 92 AEAKAETKANASAIYVPPPFAAAAILEAMEAELDLVVCITEG 133 (340)
Q Consensus 92 ~dip~~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~G 133 (340)
+++.++ . |++++++|...+.++++.|.+.|++.+|++++=
T Consensus 140 ~eli~~-~-D~ViIAvPs~~~~ei~~~l~~aGi~~Ilnf~P~ 179 (215)
T 2vt3_A 140 EQHVKD-E-SVAILTVPAVAAQSITDRLVALGIKGILNFTPA 179 (215)
T ss_dssp HHHCSS-C-CEEEECSCHHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred HHHHHh-C-CEEEEecCchhHHHHHHHHHHcCCCEEEEcCce
Confidence 676654 3 999999999999999999999999999999873
No 41
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=98.61 E-value=1.1e-07 Score=93.02 Aligned_cols=119 Identities=12% Similarity=0.119 Sum_probs=87.9
Q ss_pred CcCCeEEEEeCCCCCcchHHHHHHHHc---------CCeEEEeeCCCCCC-c---eecCc-ccccCHHHhhccCCCcEEE
Q 019500 39 VDKNTRVICQGITGKNGTFHTEQAIEY---------GTKMVGGVTPKKGG-T---EHLGL-PVFNTVAEAKAETKANASA 104 (340)
Q Consensus 39 ~p~~iaViVvGasgk~G~~v~~~l~~~---------G~~vv~~VnP~~~g-~---~i~G~-p~y~sl~dip~~~~vDlav 104 (340)
+.+.++|.|+|+ |.+|+.+++.+.+. +.++++.++++... + +-.|. ++|.+++++.+..++|+|+
T Consensus 23 Ms~klrvgiIG~-G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~ 101 (412)
T 4gqa_A 23 MSARLNIGLIGS-GFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVD 101 (412)
T ss_dssp --CEEEEEEECC-SHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEE
T ss_pred ccccceEEEEcC-cHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEE
Confidence 345699999999 99999998887753 35788888876411 1 23455 5999999998766799999
Q ss_pred EecChhhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCc-EEEccCC
Q 019500 105 IYVPPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKT-RLVGPNC 159 (340)
Q Consensus 105 i~vp~~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gi-rviGPNc 159 (340)
|++|+..+.+.+.+|+++|.+.++=-.-..+.++.++|.+++ +++|+ ..+|.|.
T Consensus 102 I~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a-~~~g~~~~v~~~~ 156 (412)
T 4gqa_A 102 ITSPNHLHYTMAMAAIAAGKHVYCEKPLAVNEQQAQEMAQAA-RRAGVKTMVAFNN 156 (412)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHH-HHHTCCEEEECGG
T ss_pred ECCCcHHHHHHHHHHHHcCCCeEeecCCcCCHHHHHHHHHHH-HHhCCeeeeccce
Confidence 999999999999999999987643222245667778888776 55564 4556553
No 42
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.61 E-value=9.9e-08 Score=92.02 Aligned_cols=116 Identities=16% Similarity=0.161 Sum_probs=88.7
Q ss_pred CCeEEEEeCCCCCcchHHHHHHH-H-cCCeEEEeeCCCCCC-c---eecC--cccccCHHHhhccCCCcEEEEecChhhH
Q 019500 41 KNTRVICQGITGKNGTFHTEQAI-E-YGTKMVGGVTPKKGG-T---EHLG--LPVFNTVAEAKAETKANASAIYVPPPFA 112 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~-~-~G~~vv~~VnP~~~g-~---~i~G--~p~y~sl~dip~~~~vDlavi~vp~~~v 112 (340)
+.++|.|+|+ |++|+.+++.+. + .++++++.++++... + +-.| .+.|.+++++.+..++|++++++|+..+
T Consensus 22 ~~~rvgiIG~-G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 100 (357)
T 3ec7_A 22 MTLKAGIVGI-GMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASNEAH 100 (357)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCGGGH
T ss_pred CeeeEEEECC-cHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCcHHH
Confidence 4688999999 999999999988 4 378888788876521 1 1245 6899999999875579999999999999
Q ss_pred HHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEE--EccC
Q 019500 113 AAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRL--VGPN 158 (340)
Q Consensus 113 ~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girv--iGPN 158 (340)
.+.+.+|+++|.+.++--.-..+.++.+++.+++ +++|+++ +|-+
T Consensus 101 ~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a-~~~g~~~~~v~~~ 147 (357)
T 3ec7_A 101 ADVAVAALNANKYVFCEKPLAVTAADCQRVIEAE-QKNGKRMVQIGFM 147 (357)
T ss_dssp HHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHH-HHHTSCCEEEECG
T ss_pred HHHHHHHHHCCCCEEeecCccCCHHHHHHHHHHH-HHhCCeEEEEeec
Confidence 9999999999976533222255667778888776 6777754 4444
No 43
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=98.61 E-value=2.7e-07 Score=86.72 Aligned_cols=114 Identities=11% Similarity=0.044 Sum_probs=86.4
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHH----cCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChhhHHHHH
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIE----YGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAI 116 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~----~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v 116 (340)
+.++|.|+|+ |.+|+.+++.+.+ .++++++..+++.. .+..|++ |.+++++.+..++|++++++|+..+.+.+
T Consensus 6 ~~~rvgiIG~-G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~-a~~~g~~-~~~~~ell~~~~vD~V~i~tp~~~H~~~~ 82 (294)
T 1lc0_A 6 GKFGVVVVGV-GRAGSVRLRDLKDPRSAAFLNLIGFVSRREL-GSLDEVR-QISLEDALRSQEIDVAYICSESSSHEDYI 82 (294)
T ss_dssp CSEEEEEECC-SHHHHHHHHHHTSHHHHTTEEEEEEECSSCC-CEETTEE-BCCHHHHHHCSSEEEEEECSCGGGHHHHH
T ss_pred CcceEEEEEE-cHHHHHHHHHHhccccCCCEEEEEEECchHH-HHHcCCC-CCCHHHHhcCCCCCEEEEeCCcHhHHHHH
Confidence 4688999999 9999998888765 36778877776542 3456777 78999998655799999999999999999
Q ss_pred HHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 117 LEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 117 ~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
.+|+++|.+.++=-.-..+.++.+++.+++ +++|+. .+|++
T Consensus 83 ~~al~aGkhVl~EKPla~~~~ea~~l~~~a-~~~g~~~~~~~~ 124 (294)
T 1lc0_A 83 RQFLQAGKHVLVEYPMTLSFAAAQELWELA-AQKGRVLHEEHV 124 (294)
T ss_dssp HHHHHTTCEEEEESCSCSCHHHHHHHHHHH-HHTTCCEEEECG
T ss_pred HHHHHCCCcEEEeCCCCCCHHHHHHHHHHH-HHhCCEEEEEEh
Confidence 999999987643222234556777888776 666765 45554
No 44
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=98.60 E-value=1.2e-07 Score=92.35 Aligned_cols=114 Identities=21% Similarity=0.367 Sum_probs=87.6
Q ss_pred CeEEEEeCCCC-CcchHHHHHHHHc-CCeEEEeeCCCCCC-c---eecCcccccCHHHhhccCCCcEEEEecChhhHHHH
Q 019500 42 NTRVICQGITG-KNGTFHTEQAIEY-GTKMVGGVTPKKGG-T---EHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAA 115 (340)
Q Consensus 42 ~iaViVvGasg-k~G~~v~~~l~~~-G~~vv~~VnP~~~g-~---~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~ 115 (340)
.++|.|+|+ | .+|..+++.+.+. ++++++.++++... + +-.|+++|.+++++.+..++|+++|++|+..+.+.
T Consensus 2 ~~rigiiG~-G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~~~H~~~ 80 (387)
T 3moi_A 2 KIRFGICGL-GFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQFHCEH 80 (387)
T ss_dssp CEEEEEECC-SHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCGGGHHHH
T ss_pred ceEEEEEeC-CHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCcHHHHHH
Confidence 578889999 7 8898899988875 77888888876410 1 23589999999999875579999999999999999
Q ss_pred HHHHHHcCCcEEEEecC-CCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 116 ILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 116 v~ea~~~Gvk~vvi~t~-Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
+.+|+++|.+.++ =-+ ..+.++.+++.+++ +++|+. .+|.|
T Consensus 81 ~~~al~aGk~Vl~-EKP~a~~~~e~~~l~~~a-~~~g~~~~v~~~ 123 (387)
T 3moi_A 81 VVQASEQGLHIIV-EKPLTLSRDEADRMIEAV-ERAGVHLVVGTS 123 (387)
T ss_dssp HHHHHHTTCEEEE-CSCCCSCHHHHHHHHHHH-HHHTCCEEECCC
T ss_pred HHHHHHCCCceee-eCCccCCHHHHHHHHHHH-HHhCCeEEEEec
Confidence 9999999976533 222 45567777887776 566654 45554
No 45
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=98.60 E-value=1.4e-07 Score=91.15 Aligned_cols=116 Identities=14% Similarity=0.089 Sum_probs=87.7
Q ss_pred cCCeEEEEeCCCCCcchH-HHHHHHHc-CCeEEEeeCCCCC--CceecCcccccCHHHhhccCCCcEEEEecChhhHHHH
Q 019500 40 DKNTRVICQGITGKNGTF-HTEQAIEY-GTKMVGGVTPKKG--GTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAA 115 (340)
Q Consensus 40 p~~iaViVvGasgk~G~~-v~~~l~~~-G~~vv~~VnP~~~--g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~ 115 (340)
.+.++|.|+|+ |++|+. +.+.+.+. ++++++.++++.. .....+.++|.+++++.+..++|+++|++|+..+.+.
T Consensus 5 ~~~~rvgiiG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~H~~~ 83 (364)
T 3e82_A 5 NNTINIALIGY-GFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKRDLPDVTVIASPEAAVQHPDVDLVVIASPNATHAPL 83 (364)
T ss_dssp --CEEEEEECC-SHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHHHCTTSEEESCHHHHHTCTTCSEEEECSCGGGHHHH
T ss_pred CCcceEEEECC-CHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCcEECCHHHHhcCCCCCEEEEeCChHHHHHH
Confidence 35688999999 999985 77878775 7888888887641 1234578999999999875579999999999999999
Q ss_pred HHHHHHcCCcEEEEecC-CCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 116 ILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 116 v~ea~~~Gvk~vvi~t~-Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
+.+|+++|.+. ++=-+ ..+.++.+++.+++ +++|+. .+|.|
T Consensus 84 ~~~al~aGk~V-l~EKPla~~~~e~~~l~~~a-~~~g~~~~v~~~ 126 (364)
T 3e82_A 84 ARLALNAGKHV-VVDKPFTLDMQEARELIALA-EEKQRLLSVFHN 126 (364)
T ss_dssp HHHHHHTTCEE-EECSCSCSSHHHHHHHHHHH-HHTTCCEEECCC
T ss_pred HHHHHHCCCcE-EEeCCCcCCHHHHHHHHHHH-HHhCCeEEEEee
Confidence 99999999775 32222 45667778888776 677765 34544
No 46
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=98.59 E-value=3.1e-07 Score=87.40 Aligned_cols=111 Identities=14% Similarity=0.176 Sum_probs=81.7
Q ss_pred CeEEEEeCCCCCcch-HHHHHHHHcCCeEEEeeCCCCCC-c----eecCcccccCHHHhhccCCCcEEEEecChhhHHHH
Q 019500 42 NTRVICQGITGKNGT-FHTEQAIEYGTKMVGGVTPKKGG-T----EHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAA 115 (340)
Q Consensus 42 ~iaViVvGasgk~G~-~v~~~l~~~G~~vv~~VnP~~~g-~----~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~ 115 (340)
+++|.|+|+ |++|. .+.+.+...++++++.++++... + +..+.++|.+++++.+..++|+++|++|+..+.+.
T Consensus 4 ~~rvgiiG~-G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~ 82 (336)
T 2p2s_A 4 KIRFAAIGL-AHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPCDRAEL 82 (336)
T ss_dssp CCEEEEECC-SSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGGGHHHH
T ss_pred ccEEEEECC-ChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChhhHHHH
Confidence 578888999 77774 46666766689988777765421 1 12378899999999875579999999999999999
Q ss_pred HHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEE
Q 019500 116 ILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRL 154 (340)
Q Consensus 116 v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girv 154 (340)
+.+|+++|.+.++--.-..+.++.+++.+++ +++|+.+
T Consensus 83 ~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a-~~~g~~~ 120 (336)
T 2p2s_A 83 ALRTLDAGKDFFTAKPPLTTLEQLDAVQRRV-AETGRKF 120 (336)
T ss_dssp HHHHHHTTCEEEECSSCCSCHHHHHHHHHHH-HHHCCCE
T ss_pred HHHHHHCCCcEEEeCCCCCCHHHHHHHHHHH-HHcCCEE
Confidence 9999999987533111234556777787776 6667554
No 47
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=98.59 E-value=1.4e-07 Score=90.25 Aligned_cols=118 Identities=13% Similarity=0.131 Sum_probs=87.5
Q ss_pred CcCCeEEEEeCCCC-CcchHHHHHHHHc--CCeEEEeeCCCCCC-c---eecCc-ccccCHHHhhccCCCcEEEEecChh
Q 019500 39 VDKNTRVICQGITG-KNGTFHTEQAIEY--GTKMVGGVTPKKGG-T---EHLGL-PVFNTVAEAKAETKANASAIYVPPP 110 (340)
Q Consensus 39 ~p~~iaViVvGasg-k~G~~v~~~l~~~--G~~vv~~VnP~~~g-~---~i~G~-p~y~sl~dip~~~~vDlavi~vp~~ 110 (340)
.++.++|.|+|+ | .+|+.+++.+.+. ++++++.++++... + +-.|. ++|.+++++.+..++|+++|++|+.
T Consensus 15 ~~~~irvgiIG~-G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 93 (340)
T 1zh8_A 15 PLRKIRLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPVE 93 (340)
T ss_dssp -CCCEEEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCGG
T ss_pred CCCceeEEEEec-CHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCch
Confidence 456789999999 7 7898899988875 57888888876410 1 12465 7899999998755799999999999
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 111 FAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 111 ~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
.+.+.+.+|+++|.+.++=-.-..+.++.+++.+++ +++|+. .+|-|
T Consensus 94 ~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a-~~~g~~~~v~~~ 141 (340)
T 1zh8_A 94 LNLPFIEKALRKGVHVICEKPISTDVETGKKVVELS-EKSEKTVYIAEN 141 (340)
T ss_dssp GHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHH-HHCSSCEEEECG
T ss_pred HHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHH-HHcCCeEEEEec
Confidence 999999999999976533211245566777888776 667754 44433
No 48
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.58 E-value=2.8e-07 Score=87.08 Aligned_cols=110 Identities=15% Similarity=0.138 Sum_probs=82.9
Q ss_pred CCeEEEEeCCCCCcchH-HHHHHHHc-CCeEEEeeCCCCCCc----eecCcccccCHHHhhccCCCcEEEEecChhhHHH
Q 019500 41 KNTRVICQGITGKNGTF-HTEQAIEY-GTKMVGGVTPKKGGT----EHLGLPVFNTVAEAKAETKANASAIYVPPPFAAA 114 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~-v~~~l~~~-G~~vv~~VnP~~~g~----~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~ 114 (340)
+.++|.|+|+ |++|+. +++.+.+. ++++++.++++.... +..|+++|.+++++ .+ ++|++++++|+..+.+
T Consensus 4 ~~~~vgiiG~-G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l-~~-~~D~V~i~tp~~~h~~ 80 (319)
T 1tlt_A 4 KKLRIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSL-AA-SCDAVFVHSSTASHFD 80 (319)
T ss_dssp -CEEEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHH-HT-TCSEEEECSCTTHHHH
T ss_pred CcceEEEECC-CHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHh-hc-CCCEEEEeCCchhHHH
Confidence 3578899999 999986 88888764 778877777665211 13478899999988 32 6999999999999999
Q ss_pred HHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEE
Q 019500 115 AILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRL 154 (340)
Q Consensus 115 ~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girv 154 (340)
.+.+|+++|.+.++--....+.++.+++.+++ ++.|+.+
T Consensus 81 ~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a-~~~g~~~ 119 (319)
T 1tlt_A 81 VVSTLLNAGVHVCVDKPLAENLRDAERLVELA-ARKKLTL 119 (319)
T ss_dssp HHHHHHHTTCEEEEESSSCSSHHHHHHHHHHH-HHTTCCE
T ss_pred HHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHH-HHcCCeE
Confidence 99999999987543223356667777888776 6777654
No 49
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=98.58 E-value=2.1e-07 Score=89.56 Aligned_cols=116 Identities=8% Similarity=0.071 Sum_probs=86.4
Q ss_pred cCCeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCCC-c---eecC----cccccCHHHhhccCCCcEEEEecChh
Q 019500 40 DKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-T---EHLG----LPVFNTVAEAKAETKANASAIYVPPP 110 (340)
Q Consensus 40 p~~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~g-~---~i~G----~p~y~sl~dip~~~~vDlavi~vp~~ 110 (340)
.++++|.|+|+ |++|+.+++.+.+. ++++++.++++... + +-.| .++|.+++++.+..++|++++++|+.
T Consensus 4 ~~~~~vgiiG~-G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 82 (362)
T 1ydw_A 4 ETQIRIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTS 82 (362)
T ss_dssp --CEEEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGG
T ss_pred CCceEEEEECc-hHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChH
Confidence 34688999999 99999999988875 67888778876410 1 1234 47899999998644699999999999
Q ss_pred hHHHHHHHHHHcCCcEEEEec-CCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 111 FAAAAILEAMEAELDLVVCIT-EGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 111 ~v~~~v~ea~~~Gvk~vvi~t-~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
.+.+.+.+|+++|.+.+ +-- -..+.++.+++.+++ +++|+. .+|.+
T Consensus 83 ~h~~~~~~al~aGk~V~-~EKP~a~~~~e~~~l~~~a-~~~g~~~~~~~~ 130 (362)
T 1ydw_A 83 LHVEWAIKAAEKGKHIL-LEKPVAMNVTEFDKIVDAC-EANGVQIMDGTM 130 (362)
T ss_dssp GHHHHHHHHHTTTCEEE-ECSSCSSSHHHHHHHHHHH-HTTTCCEEECCC
T ss_pred HHHHHHHHHHHCCCeEE-EecCCcCCHHHHHHHHHHH-HHcCCEEEEEEe
Confidence 99999999999998653 322 245666778888776 677765 44544
No 50
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.58 E-value=2.5e-07 Score=88.03 Aligned_cols=116 Identities=20% Similarity=0.360 Sum_probs=85.6
Q ss_pred cCCeEEEEeCCCCCcchHHHHHHH-Hc-CCeEEEeeCCCCCC-c---eecCc-ccccCHHHhhccCCCcEEEEecChhhH
Q 019500 40 DKNTRVICQGITGKNGTFHTEQAI-EY-GTKMVGGVTPKKGG-T---EHLGL-PVFNTVAEAKAETKANASAIYVPPPFA 112 (340)
Q Consensus 40 p~~iaViVvGasgk~G~~v~~~l~-~~-G~~vv~~VnP~~~g-~---~i~G~-p~y~sl~dip~~~~vDlavi~vp~~~v 112 (340)
++.++|.|+|+ |++|+.+++.+. +. ++++++.++++... + +-.|. ++|.+++++.+..++|++++++|+..+
T Consensus 6 ~~~~~v~iiG~-G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h 84 (346)
T 3cea_A 6 RKPLRAAIIGL-GRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFH 84 (346)
T ss_dssp CCCEEEEEECC-STTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGH
T ss_pred CCcceEEEEcC-CHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhH
Confidence 34678999999 999999999988 54 77888777776410 1 12466 689999999864469999999999999
Q ss_pred HHHHHHHHHcCCcEEEEe-cCCCChhhHHHHHHHHhccC-CcEEE-ccC
Q 019500 113 AAAILEAMEAELDLVVCI-TEGIPQHDMVRVKAALNNQS-KTRLV-GPN 158 (340)
Q Consensus 113 ~~~v~ea~~~Gvk~vvi~-t~Gf~e~~~~~l~~~aar~~-girvi-GPN 158 (340)
.+.+.+|+++|.+. ++- ....+.++.+++.+++ +++ |+.+. |.|
T Consensus 85 ~~~~~~al~~G~~v-~~eKp~~~~~~~~~~l~~~a-~~~~~~~~~~~~~ 131 (346)
T 3cea_A 85 PEMTIYAMNAGLNV-FCEKPLGLDFNEVDEMAKVI-KSHPNQIFQSGFM 131 (346)
T ss_dssp HHHHHHHHHTTCEE-EECSCCCSCHHHHHHHHHHH-HTCTTSCEECCCG
T ss_pred HHHHHHHHHCCCEE-EEcCCCCCCHHHHHHHHHHH-HhCCCCeEEEecc
Confidence 99999999999654 332 2244556677777776 667 76643 443
No 51
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=98.58 E-value=2.4e-07 Score=91.96 Aligned_cols=113 Identities=12% Similarity=0.107 Sum_probs=86.5
Q ss_pred CCeEEEEeCC---CCCcchHHHHHHHHc--CCeEEEeeCCCCCC-c---eecCcc---cccCHHHhhccCCCcEEEEecC
Q 019500 41 KNTRVICQGI---TGKNGTFHTEQAIEY--GTKMVGGVTPKKGG-T---EHLGLP---VFNTVAEAKAETKANASAIYVP 108 (340)
Q Consensus 41 ~~iaViVvGa---sgk~G~~v~~~l~~~--G~~vv~~VnP~~~g-~---~i~G~p---~y~sl~dip~~~~vDlavi~vp 108 (340)
+.++|.|+|+ .|.+|+.+++.+.+. ++++++.++++... + +..|++ +|.+++++.+..++|+++|++|
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~tp 98 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQ 98 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECSC
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeCC
Confidence 5689999999 488999999999886 67888888876410 1 134665 8999999987547999999999
Q ss_pred hhhHHHHHHHHHHcCC-----cEEEEe-cCCCChhhHHHHHHHHhccCCcEE
Q 019500 109 PPFAAAAILEAMEAEL-----DLVVCI-TEGIPQHDMVRVKAALNNQSKTRL 154 (340)
Q Consensus 109 ~~~v~~~v~ea~~~Gv-----k~vvi~-t~Gf~e~~~~~l~~~aar~~girv 154 (340)
+..+.+.+.+|+++|. |.+++= .-..+.++.+++.+++ +++|+.+
T Consensus 99 ~~~H~~~~~~al~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a-~~~g~~~ 149 (438)
T 3btv_A 99 VASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAA-AERGVQT 149 (438)
T ss_dssp HHHHHHHHHHHHHHGGGCTTCCEEEEESSCCSSHHHHHHHHHHH-HTTTCEE
T ss_pred cHHHHHHHHHHHHCCCCcccceeEEecCcccCCHHHHHHHHHHH-HHcCCeE
Confidence 9999999999999992 443432 2345566778888776 6777653
No 52
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.56 E-value=1.3e-07 Score=90.43 Aligned_cols=115 Identities=17% Similarity=0.191 Sum_probs=87.1
Q ss_pred CeEEEEeCCCCCcchHHHHHHH-H-cCCeEEEeeCCCCCC-c---eecC--cccccCHHHhhccCCCcEEEEecChhhHH
Q 019500 42 NTRVICQGITGKNGTFHTEQAI-E-YGTKMVGGVTPKKGG-T---EHLG--LPVFNTVAEAKAETKANASAIYVPPPFAA 113 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~-~-~G~~vv~~VnP~~~g-~---~i~G--~p~y~sl~dip~~~~vDlavi~vp~~~v~ 113 (340)
+++|.|+|+ |.+|+.+++.+. + .++++++.++++... + +-.| .++|.+++++.+..++|++++++|+..+.
T Consensus 2 ~~rigiIG~-G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~ 80 (344)
T 3mz0_A 2 SLRIGVIGT-GAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPAHE 80 (344)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGGHH
T ss_pred eEEEEEECc-cHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCchhHH
Confidence 367888999 999999999998 5 378888788876410 1 1246 67999999998755699999999999999
Q ss_pred HHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEE--EccC
Q 019500 114 AAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRL--VGPN 158 (340)
Q Consensus 114 ~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girv--iGPN 158 (340)
+.+.+|+++|.+.++--.-..+.++.+++.+++ +++|+++ +|-|
T Consensus 81 ~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a-~~~g~~~~~v~~~ 126 (344)
T 3mz0_A 81 SSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEE-IKVGKRLVQVGFM 126 (344)
T ss_dssp HHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHH-HHHSSCCEEECCG
T ss_pred HHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHH-HHHCCEEEEEecc
Confidence 999999999976533112255667778888776 6777755 4444
No 53
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=98.55 E-value=2.9e-07 Score=86.91 Aligned_cols=117 Identities=16% Similarity=0.137 Sum_probs=85.2
Q ss_pred cCCeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCCC-cee-cCcccccCHHHhhccCCCcEEEEecChhhHHHHH
Q 019500 40 DKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-TEH-LGLPVFNTVAEAKAETKANASAIYVPPPFAAAAI 116 (340)
Q Consensus 40 p~~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~g-~~i-~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v 116 (340)
++.++|.|+|+ |++|+.+++.+.+. ++++++.++++... +.. ..+++|.+++++.+..++|++++++|+..+.+.+
T Consensus 8 ~~~~~igiIG~-G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~ 86 (315)
T 3c1a_A 8 NSPVRLALIGA-GRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPGCVIESDWRSVVSAPEVEAVIIATPPATHAEIT 86 (315)
T ss_dssp -CCEEEEEEEC-TTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTTCEEESSTHHHHTCTTCCEEEEESCGGGHHHHH
T ss_pred CCcceEEEECC-cHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhhCcccCCHHHHhhCCCCCEEEEeCChHHHHHHH
Confidence 34678999999 99999999999885 67877777765310 111 1167899999998544699999999999999999
Q ss_pred HHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 117 LEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 117 ~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
.+|+++|.+.++--....+.++.+++.+++ +++|+. .+|.+
T Consensus 87 ~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a-~~~g~~~~~~~~ 128 (315)
T 3c1a_A 87 LAAIASGKAVLVEKPLTLDLAEAEAVAAAA-KATGVMVWVEHT 128 (315)
T ss_dssp HHHHHTTCEEEEESSSCSCHHHHHHHHHHH-HHHCCCEEEECG
T ss_pred HHHHHCCCcEEEcCCCcCCHHHHHHHHHHH-HHcCCEEEEeec
Confidence 999999976533212345666777787776 566654 55554
No 54
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=98.55 E-value=5.2e-07 Score=87.10 Aligned_cols=116 Identities=10% Similarity=0.054 Sum_probs=85.0
Q ss_pred CCeEEEEeCCCCCcch-HHHHHHHHcCCeEEEeeCCCCCC-c---eec-CcccccCHHHhhccCCCcEEEEecChhhHHH
Q 019500 41 KNTRVICQGITGKNGT-FHTEQAIEYGTKMVGGVTPKKGG-T---EHL-GLPVFNTVAEAKAETKANASAIYVPPPFAAA 114 (340)
Q Consensus 41 ~~iaViVvGasgk~G~-~v~~~l~~~G~~vv~~VnP~~~g-~---~i~-G~p~y~sl~dip~~~~vDlavi~vp~~~v~~ 114 (340)
+.++|.|+|+ |.++. .+...+...++++++.+++.... + +-. +.++|.+++++.+..++|+++|++|+..+.+
T Consensus 25 ~~irvgiiG~-G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~H~~ 103 (361)
T 3u3x_A 25 DELRFAAVGL-NHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAVSSERAE 103 (361)
T ss_dssp -CCEEEEECC-CSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCCHHHHHH
T ss_pred cCcEEEEECc-CHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChHHHHH
Confidence 3578899999 77774 45566666789999888876411 1 123 4689999999987657999999999999999
Q ss_pred HHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 115 AILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 115 ~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
.+.+|+++|.+.++=-.-..+.++.+++.+++ +++|+. .+|-|
T Consensus 104 ~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a-~~~g~~l~v~~~ 147 (361)
T 3u3x_A 104 LAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQ-AETGRIFSILYS 147 (361)
T ss_dssp HHHHHHHTTCEEEEESCSCSSHHHHHHHHHHH-HTTCCCEEEECH
T ss_pred HHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHH-HHcCCEEEEech
Confidence 99999999987543222245667778888876 677765 34443
No 55
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.55 E-value=1.6e-07 Score=89.77 Aligned_cols=115 Identities=15% Similarity=0.209 Sum_probs=86.7
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCCC-c---eecCcc-cccCHHHhhccCCCcEEEEecChhhHHHH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-T---EHLGLP-VFNTVAEAKAETKANASAIYVPPPFAAAA 115 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~g-~---~i~G~p-~y~sl~dip~~~~vDlavi~vp~~~v~~~ 115 (340)
+++|.|+|+ |++|+.+++.+.+. ++++++.++++... + +-.|++ +|.+++++.+..++|++++++|+..+.+.
T Consensus 2 ~~rvgiIG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~ 80 (344)
T 3ezy_A 2 SLRIGVIGL-GRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTNTHSEL 80 (344)
T ss_dssp CEEEEEECC-SHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGGGHHHH
T ss_pred eeEEEEEcC-CHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCCcchHHH
Confidence 367889999 99999999988875 77888777876411 1 235665 89999999875579999999999999999
Q ss_pred HHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 116 ILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 116 v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
+.+|+++|.+.++--.-..+.++.+++.+++ +++|+. .+|.|
T Consensus 81 ~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a-~~~g~~~~v~~~ 123 (344)
T 3ezy_A 81 VIACAKAKKHVFCEKPLSLNLADVDRMIEET-KKADVILFTGFN 123 (344)
T ss_dssp HHHHHHTTCEEEEESCSCSCHHHHHHHHHHH-HHHTCCEEEECG
T ss_pred HHHHHhcCCeEEEECCCCCCHHHHHHHHHHH-HHhCCcEEEeec
Confidence 9999999977543222266677788888776 566654 44443
No 56
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=98.52 E-value=1.5e-07 Score=90.17 Aligned_cols=115 Identities=10% Similarity=-0.054 Sum_probs=84.0
Q ss_pred CeEEEEeCCCCCcchH-HHHHH-HH-cCCeEEEeeCCCCCC----ceecCcccccCHHHhhccCCCcEEEEecChhhHHH
Q 019500 42 NTRVICQGITGKNGTF-HTEQA-IE-YGTKMVGGVTPKKGG----TEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAA 114 (340)
Q Consensus 42 ~iaViVvGasgk~G~~-v~~~l-~~-~G~~vv~~VnP~~~g----~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~ 114 (340)
+++|.|+|+ |++|+. +.+++ .+ .++++++.+++.... .+..|.++|.|++++.+..++|++++++|+..+.+
T Consensus 2 ~~rvgiiG~-G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 80 (345)
T 3f4l_A 2 VINCAFIGF-GKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSHFE 80 (345)
T ss_dssp CEEEEEECC-SHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCGGGHHH
T ss_pred ceEEEEEec-CHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCChHHHHH
Confidence 478889999 999974 77733 43 378888888775421 13457899999999987556999999999999999
Q ss_pred HHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 115 AILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 115 ~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
.+.+|+++|.+.++--.-..+.++.+++.+++ +++|+. .+|.|
T Consensus 81 ~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a-~~~g~~~~v~~~ 124 (345)
T 3f4l_A 81 YAKRALEAGKNVLVEKPFTPTLAQAKELFALA-KSKGLTVTPYQN 124 (345)
T ss_dssp HHHHHHHTTCEEEECSSSCSSHHHHHHHHHHH-HHHTCCEEECCG
T ss_pred HHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHH-HHcCCeEEEEec
Confidence 99999999976532111245566777787776 566655 44444
No 57
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.52 E-value=1.8e-07 Score=87.90 Aligned_cols=109 Identities=12% Similarity=0.068 Sum_probs=83.4
Q ss_pred CeEEEEeCCCCCcchH-HHHHHHHc-CCeEEEeeCCCCCC-c---eecCcccccCHHHhhccCCCcEEEEecChhhHHHH
Q 019500 42 NTRVICQGITGKNGTF-HTEQAIEY-GTKMVGGVTPKKGG-T---EHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAA 115 (340)
Q Consensus 42 ~iaViVvGasgk~G~~-v~~~l~~~-G~~vv~~VnP~~~g-~---~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~ 115 (340)
+++|.|+|+ |++|+. +.+.+.+. ++++++.++++... + +-.|++.|.+++++.+ ++|++++++|+..+.+.
T Consensus 6 ~~~igiIG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~--~~D~V~i~tp~~~h~~~ 82 (308)
T 3uuw_A 6 NIKMGMIGL-GSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAK--KCDCIFLHSSTETHYEI 82 (308)
T ss_dssp CCEEEEECC-SHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHT--TCSEEEECCCGGGHHHH
T ss_pred cCcEEEEec-CHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHh--cCCEEEEeCCcHhHHHH
Confidence 468888899 999986 78888774 78888788876510 1 2358888999999997 69999999999999999
Q ss_pred HHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEE
Q 019500 116 ILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRL 154 (340)
Q Consensus 116 v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girv 154 (340)
+.+|+++|.+.++=-....+.++.+++.+++ +++|+.+
T Consensus 83 ~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a-~~~g~~~ 120 (308)
T 3uuw_A 83 IKILLNLGVHVYVDKPLASTVSQGEELIELS-TKKNLNL 120 (308)
T ss_dssp HHHHHHTTCEEEECSSSSSSHHHHHHHHHHH-HHHTCCE
T ss_pred HHHHHHCCCcEEEcCCCCCCHHHHHHHHHHH-HHcCCEE
Confidence 9999999987432112345667777787776 5666543
No 58
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.51 E-value=5.2e-07 Score=85.38 Aligned_cols=113 Identities=12% Similarity=0.100 Sum_probs=83.5
Q ss_pred eEEEEeCCCCCcchHH-HHHHHHcCCeEEEeeCCCCCC-c---eecCcc-cccCHHHhhccCCCcEEEEecChhhHHHHH
Q 019500 43 TRVICQGITGKNGTFH-TEQAIEYGTKMVGGVTPKKGG-T---EHLGLP-VFNTVAEAKAETKANASAIYVPPPFAAAAI 116 (340)
Q Consensus 43 iaViVvGasgk~G~~v-~~~l~~~G~~vv~~VnP~~~g-~---~i~G~p-~y~sl~dip~~~~vDlavi~vp~~~v~~~v 116 (340)
++|.|+|+ |++|+.+ .+.+.+.++++++.++++... + +-.|.+ +|.+++++.+..++|++++++|+..+.+.+
T Consensus 1 ~~vgiiG~-G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~ 79 (332)
T 2glx_A 1 NRWGLIGA-STIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELHREQT 79 (332)
T ss_dssp CEEEEESC-CHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGGHHHHH
T ss_pred CeEEEEcc-cHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhHhHHHH
Confidence 36788899 9999987 777777778888777876410 1 124775 899999997644699999999999999999
Q ss_pred HHHHHcCCcEEEEec-CCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 117 LEAMEAELDLVVCIT-EGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 117 ~ea~~~Gvk~vvi~t-~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
.+|+++|.+. ++-. ...+.++.+++.+++ +++|+. .+|++
T Consensus 80 ~~al~~Gk~v-~~ekP~~~~~~~~~~l~~~a-~~~g~~~~~~~~ 121 (332)
T 2glx_A 80 LAAIRAGKHV-LCEKPLAMTLEDAREMVVAA-REAGVVLGTNHH 121 (332)
T ss_dssp HHHHHTTCEE-EECSSSCSSHHHHHHHHHHH-HHHTCCEEECCC
T ss_pred HHHHHCCCeE-EEeCCCcCCHHHHHHHHHHH-HHcCCEEEEeeh
Confidence 9999999765 3322 244566777787776 566655 45554
No 59
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=98.50 E-value=2.8e-07 Score=88.82 Aligned_cols=116 Identities=13% Similarity=0.106 Sum_probs=87.5
Q ss_pred CCeEEEEeCCCCCcchH-HHHHHHHc-CCeEEEeeCCCCC--CceecCcccccCHHHhhccCCCcEEEEecChhhHHHHH
Q 019500 41 KNTRVICQGITGKNGTF-HTEQAIEY-GTKMVGGVTPKKG--GTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAI 116 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~-v~~~l~~~-G~~vv~~VnP~~~--g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v 116 (340)
+.++|.|+|+ |++|+. +.+.+.+. ++++++.+++... .++..+.++|.+++++.+..++|+++|++|+..+.+.+
T Consensus 4 ~~~rvgiiG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~ 82 (358)
T 3gdo_A 4 DTIKVGILGY-GLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKRDFPDAEVVHELEEITNDPAIELVIVTTPSGLHYEHT 82 (358)
T ss_dssp TCEEEEEECC-SHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHHHCTTSEEESSTHHHHTCTTCCEEEECSCTTTHHHHH
T ss_pred CcceEEEEcc-CHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEcCCcHHHHHHH
Confidence 4688999999 999985 77777765 7888888887641 01345789999999998755799999999999999999
Q ss_pred HHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 117 LEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 117 ~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
.+|+++|.+.++=-.-..+.++.+++.+++ +++|+. .+|.|
T Consensus 83 ~~al~aGkhVl~EKPla~~~~e~~~l~~~a-~~~g~~~~v~~~ 124 (358)
T 3gdo_A 83 MACIQAGKHVVMEKPMTATAEEGETLKRAA-DEKGVLLSVYHN 124 (358)
T ss_dssp HHHHHTTCEEEEESSCCSSHHHHHHHHHHH-HHHTCCEEEECG
T ss_pred HHHHHcCCeEEEecCCcCCHHHHHHHHHHH-HHcCCeEEEeee
Confidence 999999976533211245667777888776 566654 44544
No 60
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=98.50 E-value=3.3e-07 Score=87.21 Aligned_cols=115 Identities=10% Similarity=0.071 Sum_probs=85.2
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcC---CeEEEeeCCCCCC-c---eecCcc-cccCHHHhhccCCCcEEEEecChhhHH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYG---TKMVGGVTPKKGG-T---EHLGLP-VFNTVAEAKAETKANASAIYVPPPFAA 113 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G---~~vv~~VnP~~~g-~---~i~G~p-~y~sl~dip~~~~vDlavi~vp~~~v~ 113 (340)
+++|.|+|+ |++|+.+++.+.+.+ +++++..+++... + +-.|+| +|.+++++.+..++|+++|++|+..+.
T Consensus 2 ~~rigiiG~-G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~ 80 (334)
T 3ohs_X 2 ALRWGIVSV-GLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHK 80 (334)
T ss_dssp CEEEEEECC-SHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCGGGHH
T ss_pred ccEEEEECc-hHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHH
Confidence 368888998 999999998887653 5788777876410 1 235774 899999998755799999999999999
Q ss_pred HHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 114 AAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 114 ~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
+.+.+|+++|.+.++=-.-..+.++.+++.+++ +++|+. .+|.+
T Consensus 81 ~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a-~~~~~~~~v~~~ 125 (334)
T 3ohs_X 81 AAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEA-RSRGLFLMEAIW 125 (334)
T ss_dssp HHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHH-HHTTCCEEEECG
T ss_pred HHHHHHHhcCCEEEEECCCCCCHHHHHHHHHHH-HHhCCEEEEEEh
Confidence 999999999976533222245567778888776 666754 34433
No 61
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=98.50 E-value=2.8e-07 Score=88.93 Aligned_cols=116 Identities=17% Similarity=0.149 Sum_probs=85.2
Q ss_pred CCeEEEEeCCCCCcchH-HHHHHHHc-CCeEEEeeCCCCCC-----ceecCcccccCHHHhhccCCCcEEEEecChhhHH
Q 019500 41 KNTRVICQGITGKNGTF-HTEQAIEY-GTKMVGGVTPKKGG-----TEHLGLPVFNTVAEAKAETKANASAIYVPPPFAA 113 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~-v~~~l~~~-G~~vv~~VnP~~~g-----~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~ 113 (340)
+.++|.|+|+ |++|.. +++.+.+. ++++++.++++... ++..+.++|.+++++.+..++|+++|++|+..+.
T Consensus 4 ~~~rigiIG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~ 82 (359)
T 3m2t_A 4 SLIKVGLVGI-GAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPPQLHF 82 (359)
T ss_dssp CCEEEEEECC-SHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSCHHHHH
T ss_pred CcceEEEECC-CHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCCcHHHH
Confidence 4578999999 888875 77888775 77888777775410 1234678999999998755799999999999999
Q ss_pred HHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 114 AAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 114 ~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
+.+.+|+++|.+.++=-.-..+.++.+++.+++ +++|+. .+|-|
T Consensus 83 ~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a-~~~g~~~~v~~~ 127 (359)
T 3m2t_A 83 EMGLLAMSKGVNVFVEKPPCATLEELETLIDAA-RRSDVVSGVGMN 127 (359)
T ss_dssp HHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHH-HHHTCCEEECCH
T ss_pred HHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHH-HHcCCEEEEEec
Confidence 999999999987533111245556777777776 556654 44433
No 62
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=98.49 E-value=1.6e-07 Score=91.74 Aligned_cols=111 Identities=12% Similarity=0.221 Sum_probs=84.3
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHc--CCeEEEeeCCCCCC-c---eecCcccccCHHHhhccCCCcEEEEecChhhH--
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEY--GTKMVGGVTPKKGG-T---EHLGLPVFNTVAEAKAETKANASAIYVPPPFA-- 112 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~--G~~vv~~VnP~~~g-~---~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v-- 112 (340)
+.+||+|+|+ | +|+.+++.+.+. ++++++.++++... + +-.|+|+|.|++++.+ ++|+++|++|+..+
T Consensus 6 ~~~rv~VvG~-G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~--~~D~v~i~~p~~~h~~ 81 (372)
T 4gmf_A 6 PKQRVLIVGA-K-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITG--MPDIACIVVRSTVAGG 81 (372)
T ss_dssp -CEEEEEECS-T-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCS--CCSEEEECCC--CTTS
T ss_pred CCCEEEEEeh-H-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhc--CCCEEEEECCCcccch
Confidence 4689999998 6 799988888764 68899888887521 1 2469999999999997 59999999999877
Q ss_pred --HHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 113 --AAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 113 --~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
.+++++|+++|++.++ ==+ ++.+|.+++.+++ +++|+. .+|-+
T Consensus 82 ~~~~~a~~al~aGkhVl~-EKP-l~~~ea~~l~~~A-~~~g~~~~v~~~ 127 (372)
T 4gmf_A 82 AGTQLARHFLARGVHVIQ-EHP-LHPDDISSLQTLA-QEQGCCYWINTF 127 (372)
T ss_dssp HHHHHHHHHHHTTCEEEE-ESC-CCHHHHHHHHHHH-HHHTCCEEEECS
T ss_pred hHHHHHHHHHHcCCcEEE-ecC-CCHHHHHHHHHHH-HHcCCEEEEcCc
Confidence 7899999999998643 222 5667778888776 677765 55544
No 63
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.48 E-value=9.3e-07 Score=83.65 Aligned_cols=113 Identities=11% Similarity=0.057 Sum_probs=84.0
Q ss_pred eEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCCC-c---eecCc-ccccCHHHhhccCCCcEEEEecChhhHHHHH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-T---EHLGL-PVFNTVAEAKAETKANASAIYVPPPFAAAAI 116 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~g-~---~i~G~-p~y~sl~dip~~~~vDlavi~vp~~~v~~~v 116 (340)
++|.|+|+ |++|+.+++.+.+. ++++++.++++... + +-.|. ++|.+++++. ..++|++++++|+..+.+.+
T Consensus 2 ~~vgiiG~-G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~D~V~i~tp~~~h~~~~ 79 (325)
T 2ho3_A 2 LKLGVIGT-GAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFF-KSSFDLVYIASPNSLHFAQA 79 (325)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHH-TSSCSEEEECSCGGGHHHHH
T ss_pred eEEEEEeC-CHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHh-CCCCCEEEEeCChHHHHHHH
Confidence 57888899 99999999988876 67787777775410 1 12353 7899999997 33699999999999999999
Q ss_pred HHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 117 LEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 117 ~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
.+|+++|.+.++--....+.++.+++.+++ +++|+. .+|.+
T Consensus 80 ~~al~~gk~V~~EKP~~~~~~~~~~l~~~a-~~~g~~~~~~~~ 121 (325)
T 2ho3_A 80 KAALSAGKHVILEKPAVSQPQEWFDLIQTA-EKNNCFIFEAAR 121 (325)
T ss_dssp HHHHHTTCEEEEESSCCSSHHHHHHHHHHH-HHTTCCEEEECT
T ss_pred HHHHHcCCcEEEecCCcCCHHHHHHHHHHH-HHcCCEEEEEEh
Confidence 999999987543222345666777887776 667754 44544
No 64
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.45 E-value=3.2e-07 Score=86.80 Aligned_cols=111 Identities=13% Similarity=0.110 Sum_probs=77.0
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCCCceecCccc--ccCHHHhhccCCCcEEEEecChhhHHHHHH
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLGLPV--FNTVAEAKAETKANASAIYVPPPFAAAAIL 117 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~g~~i~G~p~--y~sl~dip~~~~vDlavi~vp~~~v~~~v~ 117 (340)
++++|.|+|+ |++|+.+++.+.+. ++++++.++++....+..|++. |.++.+. .++|++++++|+..+.+.+.
T Consensus 8 ~~irv~IIG~-G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~~g~~~~~~~~l~~~---~~~DvViiatp~~~h~~~~~ 83 (304)
T 3bio_A 8 KKIRAAIVGY-GNIGRYALQALREAPDFEIAGIVRRNPAEVPFELQPFRVVSDIEQL---ESVDVALVCSPSREVERTAL 83 (304)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHCTTEEEEEEECC-------CCTTSCEESSGGGS---SSCCEEEECSCHHHHHHHHH
T ss_pred CCCEEEEECC-hHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHcCCCcCCHHHHHhC---CCCCEEEECCCchhhHHHHH
Confidence 3578999999 99999999988874 7788766665432112267662 4455554 25999999999999999999
Q ss_pred HHHHcCCcEEEEecC--CCChhhHHHHHHHHhccCCcE-EEcc
Q 019500 118 EAMEAELDLVVCITE--GIPQHDMVRVKAALNNQSKTR-LVGP 157 (340)
Q Consensus 118 ea~~~Gvk~vvi~t~--Gf~e~~~~~l~~~aar~~gir-viGP 157 (340)
+|+++|++.+ +-.+ +...++.+++.+.+ ++.|+. ++|.
T Consensus 84 ~al~aG~~Vi-~ekP~~a~~~~~~~~l~~~a-~~~g~~~~v~~ 124 (304)
T 3bio_A 84 EILKKGICTA-DSFDIHDGILALRRSLGDAA-GKSGAAAVIAS 124 (304)
T ss_dssp HHHTTTCEEE-ECCCCGGGHHHHHHHHHHHH-HHHTCEEECSC
T ss_pred HHHHcCCeEE-ECCCCCCCCHHHHHHHHHHH-HhCCCEEEEeC
Confidence 9999998764 3332 44455667777766 566643 5553
No 65
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.45 E-value=3.2e-07 Score=87.41 Aligned_cols=112 Identities=12% Similarity=0.030 Sum_probs=83.8
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCCCcee-cCcccccCHHHhhccCCCcEEEEecChhhHHHHHHH
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEH-LGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILE 118 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~g~~i-~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e 118 (340)
++++|+|+|+ |++|+.+++.+.+. ++++++.++++.. ..+ .|+++|.+++++.. ++|++++++|+..+.+.+..
T Consensus 2 ~~irV~IiG~-G~mG~~~~~~l~~~~~~elvav~d~~~~-~~~~~gv~~~~d~~~ll~--~~DvViiatp~~~h~~~~~~ 77 (320)
T 1f06_A 2 TNIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRAT-LDTKTPVFDVADVDKHAD--DVDVLFLCMGSATDIPEQAP 77 (320)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSC-CSSSSCEEEGGGGGGTTT--TCSEEEECSCTTTHHHHHHH
T ss_pred CCCEEEEEee-cHHHHHHHHHHhcCCCCEEEEEEcCCHH-HhhcCCCceeCCHHHHhc--CCCEEEEcCCcHHHHHHHHH
Confidence 3578999998 99999999998876 6788877776632 122 47888999999873 69999999999999999999
Q ss_pred HHHcCCcEEEEecC-CCChhhH-HHHHHHHhccCC-cEEEccC
Q 019500 119 AMEAELDLVVCITE-GIPQHDM-VRVKAALNNQSK-TRLVGPN 158 (340)
Q Consensus 119 a~~~Gvk~vvi~t~-Gf~e~~~-~~l~~~aar~~g-irviGPN 158 (340)
|+++|++.++ -++ +.+.++. +++.+++ ++++ +.+++.+
T Consensus 78 al~aG~~Vv~-ekp~~~~~~~~~~~l~~~a-~~~~~v~v~~~~ 118 (320)
T 1f06_A 78 KFAQFACTVD-TYDNHRDIPRHRQVMNEAA-TAAGNVALVSTG 118 (320)
T ss_dssp HHTTTSEEEC-CCCCGGGHHHHHHHHHHHH-HHHTCEEECSCS
T ss_pred HHHCCCEEEE-CCCCcCCHHHHHHHHHHHH-HhCCCEEEEecC
Confidence 9999987643 343 4555555 6777766 4555 5566554
No 66
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=98.44 E-value=7.1e-07 Score=87.17 Aligned_cols=116 Identities=16% Similarity=0.102 Sum_probs=85.0
Q ss_pred CCeEEEEeCCCCC---cchHHHHHHHHc-CCeEEE-eeCCCCCC-c---eecCc---ccccCHHHhhcc-----CCCcEE
Q 019500 41 KNTRVICQGITGK---NGTFHTEQAIEY-GTKMVG-GVTPKKGG-T---EHLGL---PVFNTVAEAKAE-----TKANAS 103 (340)
Q Consensus 41 ~~iaViVvGasgk---~G~~v~~~l~~~-G~~vv~-~VnP~~~g-~---~i~G~---p~y~sl~dip~~-----~~vDla 103 (340)
+.++|.|+|+ |+ +|+.+...+... ++++++ .+++.... + +-.|+ ++|.|++++.+. .++|++
T Consensus 11 ~~~rvgiiG~-G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V 89 (398)
T 3dty_A 11 QPIRWAMVGG-GSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAV 89 (398)
T ss_dssp SCEEEEEEEC-CTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEE
T ss_pred CcceEEEEcC-CccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEE
Confidence 4688999999 87 999999888776 478886 45765410 1 23577 699999999763 359999
Q ss_pred EEecChhhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 104 AIYVPPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 104 vi~vp~~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
+|++|+..+.+.+.+|+++|.+.++=-.-..+.++.+++.+++ +++|+. .+|-|
T Consensus 90 ~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a-~~~g~~~~v~~~ 144 (398)
T 3dty_A 90 SIATPNGTHYSITKAALEAGLHVVCEKPLCFTVEQAENLRELS-HKHNRIVGVTYG 144 (398)
T ss_dssp EEESCGGGHHHHHHHHHHTTCEEEECSCSCSCHHHHHHHHHHH-HHTTCCEEECCG
T ss_pred EECCCcHHHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHH-HHcCCeEEEEec
Confidence 9999999999999999999986532111245566777888776 667755 44544
No 67
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=98.43 E-value=8.6e-07 Score=89.12 Aligned_cols=117 Identities=13% Similarity=0.085 Sum_probs=87.1
Q ss_pred CCeEEEEeCCC---CCcchHHHHHHHHc--CCeEEEeeCCCCCC-c---eecCcc---cccCHHHhhccCCCcEEEEecC
Q 019500 41 KNTRVICQGIT---GKNGTFHTEQAIEY--GTKMVGGVTPKKGG-T---EHLGLP---VFNTVAEAKAETKANASAIYVP 108 (340)
Q Consensus 41 ~~iaViVvGas---gk~G~~v~~~l~~~--G~~vv~~VnP~~~g-~---~i~G~p---~y~sl~dip~~~~vDlavi~vp 108 (340)
+.++|.|+|++ |.+|+.+++.+.+. ++++++.+++.... + +-.|++ +|.+++++.+..++|+|+|++|
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I~tp 117 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVK 117 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSC
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEcCC
Confidence 45899999995 77888899988875 77888888876410 1 234665 9999999986557999999999
Q ss_pred hhhHHHHHHHHHHcCC-----cEEEEecC-CCChhhHHHHHHHHhccCC-cE-EEccC
Q 019500 109 PPFAAAAILEAMEAEL-----DLVVCITE-GIPQHDMVRVKAALNNQSK-TR-LVGPN 158 (340)
Q Consensus 109 ~~~v~~~v~ea~~~Gv-----k~vvi~t~-Gf~e~~~~~l~~~aar~~g-ir-viGPN 158 (340)
+..+.+.+.+|+++|. |.+++=-+ ..+.++.+++.+++ +++| +. .+|.|
T Consensus 118 ~~~H~~~~~~al~aG~~~~~~khVl~EKPla~~~~ea~~l~~~a-~~~g~~~~~v~~~ 174 (479)
T 2nvw_A 118 VPEHYEVVKNILEHSSQNLNLRYLYVEWALAASVQQAEELYSIS-QQRANLQTIICLQ 174 (479)
T ss_dssp HHHHHHHHHHHHHHSSSCSSCCEEEEESSSSSSHHHHHHHHHHH-HTCTTCEEEEECG
T ss_pred cHHHHHHHHHHHHCCCCcCCceeEEEeCCCcCCHHHHHHHHHHH-HHcCCeEEEEEec
Confidence 9999999999999993 44443222 34556777888776 6777 55 44444
No 68
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=98.41 E-value=5.9e-07 Score=89.02 Aligned_cols=116 Identities=16% Similarity=0.220 Sum_probs=86.0
Q ss_pred cCCeEEEEeCCCCCcch-HHHHHHHHc-CCeEEEeeCCCCCC-c---eecCcc-----cccCHHHhhccCCCcEEEEecC
Q 019500 40 DKNTRVICQGITGKNGT-FHTEQAIEY-GTKMVGGVTPKKGG-T---EHLGLP-----VFNTVAEAKAETKANASAIYVP 108 (340)
Q Consensus 40 p~~iaViVvGasgk~G~-~v~~~l~~~-G~~vv~~VnP~~~g-~---~i~G~p-----~y~sl~dip~~~~vDlavi~vp 108 (340)
.+.++|.|+|+ |++|+ .+++.+.+. ++++++.++++... + +..|++ +|.+++++.+..++|+++|++|
T Consensus 81 ~~~irigiIG~-G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp 159 (433)
T 1h6d_A 81 DRRFGYAIVGL-GKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILP 159 (433)
T ss_dssp CCCEEEEEECC-SHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSC
T ss_pred CCceEEEEECC-cHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCC
Confidence 35689999999 99996 788888775 67888788876410 1 124654 7999999987556999999999
Q ss_pred hhhHHHHHHHHHHcCCcEEEEec-CCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 109 PPFAAAAILEAMEAELDLVVCIT-EGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 109 ~~~v~~~v~ea~~~Gvk~vvi~t-~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
+..+.+.+.+|+++|.+. ++=- ...+.++.+++.+++ +++|+. .+|.|
T Consensus 160 ~~~h~~~~~~al~aGk~V-l~EKPla~~~~e~~~l~~~a-~~~g~~~~v~~~ 209 (433)
T 1h6d_A 160 NSLHAEFAIRAFKAGKHV-MCEKPMATSVADCQRMIDAA-KAANKKLMIGYR 209 (433)
T ss_dssp GGGHHHHHHHHHHTTCEE-EECSSCCSSHHHHHHHHHHH-HHHTCCEEECCG
T ss_pred chhHHHHHHHHHHCCCcE-EEcCCCCCCHHHHHHHHHHH-HHhCCeEEEEec
Confidence 999999999999999864 3322 245566777787776 566654 45544
No 69
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=98.40 E-value=8.9e-07 Score=87.18 Aligned_cols=117 Identities=21% Similarity=0.216 Sum_probs=85.5
Q ss_pred CCeEEEEeCCCCC---cchHHHHHHHHc-CCeEEE-eeCCCCCC-c---eecCc---ccccCHHHhhcc-----CCCcEE
Q 019500 41 KNTRVICQGITGK---NGTFHTEQAIEY-GTKMVG-GVTPKKGG-T---EHLGL---PVFNTVAEAKAE-----TKANAS 103 (340)
Q Consensus 41 ~~iaViVvGasgk---~G~~v~~~l~~~-G~~vv~-~VnP~~~g-~---~i~G~---p~y~sl~dip~~-----~~vDla 103 (340)
+.++|.|+|+ |+ +|+.+...+... ++++++ .+++.... + +-.|+ ++|.+++++.+. .++|+|
T Consensus 36 ~~~rvgiiG~-G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V 114 (417)
T 3v5n_A 36 KRIRLGMVGG-GSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAV 114 (417)
T ss_dssp CCEEEEEESC-C--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEE
T ss_pred CcceEEEEcC-CCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEE
Confidence 4689999999 87 898888887776 478876 56765410 1 23577 599999999864 469999
Q ss_pred EEecChhhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccCC
Q 019500 104 AIYVPPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPNC 159 (340)
Q Consensus 104 vi~vp~~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPNc 159 (340)
+|++|+..+.+.+.+|+++|.+.++=-.-..+.++.+++.+++ +++|+. .+|-|.
T Consensus 115 ~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a-~~~g~~~~v~~~~ 170 (417)
T 3v5n_A 115 AIVTPNHVHYAAAKEFLKRGIHVICDKPLTSTLADAKKLKKAA-DESDALFVLTHNY 170 (417)
T ss_dssp EECSCTTSHHHHHHHHHTTTCEEEEESSSCSSHHHHHHHHHHH-HHCSSCEEEECGG
T ss_pred EECCCcHHHHHHHHHHHhCCCeEEEECCCcCCHHHHHHHHHHH-HHcCCEEEEEecc
Confidence 9999999999999999999987533222245667777887776 566654 555553
No 70
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=98.39 E-value=6.6e-07 Score=85.71 Aligned_cols=116 Identities=14% Similarity=0.050 Sum_probs=82.4
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHc--------CCeEEEeeCCCCCC-c---eecCc-ccccCHHHhhccCCCcEEEEecC
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEY--------GTKMVGGVTPKKGG-T---EHLGL-PVFNTVAEAKAETKANASAIYVP 108 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~--------G~~vv~~VnP~~~g-~---~i~G~-p~y~sl~dip~~~~vDlavi~vp 108 (340)
+++|.|+|+ |.+|+.+++.+.+. +.++++.++++... + +-.|+ ++|.|++++.+..++|+++|++|
T Consensus 6 klrvgiIG~-G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~tP 84 (390)
T 4h3v_A 6 NLGIGLIGY-AFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCTP 84 (390)
T ss_dssp EEEEEEECH-HHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECSC
T ss_pred cCcEEEEcC-CHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCC
Confidence 578999999 89999888877653 23677777776410 1 13465 58999999987667999999999
Q ss_pred hhhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHH--hccCCcE-EEccC
Q 019500 109 PPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAAL--NNQSKTR-LVGPN 158 (340)
Q Consensus 109 ~~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~a--ar~~gir-viGPN 158 (340)
+..+.+.+.+|+++|.+.++=-.-..+.++.++|.+.+ +++.|+. .+|-|
T Consensus 85 ~~~H~~~~~~al~aGkhVl~EKPla~t~~ea~~l~~~~~~~~~~g~~~~v~~~ 137 (390)
T 4h3v_A 85 GDSHAEIAIAALEAGKHVLCEKPLANTVAEAEAMAAAAAKAAAGGIRSMVGFT 137 (390)
T ss_dssp GGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHHHTTCCEEEECG
T ss_pred hHHHHHHHHHHHHcCCCceeecCcccchhHHHHHHHHHHHHHhcCCceEEEee
Confidence 99999999999999987643222245556666664432 1445644 45554
No 71
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=98.36 E-value=1.1e-06 Score=87.13 Aligned_cols=117 Identities=16% Similarity=0.148 Sum_probs=86.2
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCCC-ce------ecC---ccccc----CHHHhhccCCCcEEEE
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-TE------HLG---LPVFN----TVAEAKAETKANASAI 105 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~g-~~------i~G---~p~y~----sl~dip~~~~vDlavi 105 (340)
+.++|.|+|+ |.+|+.+++.+.+. ++++++.++++... +. -.| .++|. +++++.+..++|+++|
T Consensus 19 ~~~rvgiIG~-G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i 97 (444)
T 2ixa_A 19 KKVRIAFIAV-GLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFV 97 (444)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEE
T ss_pred CCceEEEEec-CHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEE
Confidence 4688999998 99999999988875 78888888776410 11 124 57898 9999987557999999
Q ss_pred ecChhhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccCC
Q 019500 106 YVPPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPNC 159 (340)
Q Consensus 106 ~vp~~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPNc 159 (340)
++|+..+.+.+.+|+++|.+.++=-.-..+.++.+++.+++ +++|+. .++.|+
T Consensus 98 ~tp~~~h~~~~~~al~aGkhV~~EKP~a~~~~ea~~l~~~a-~~~g~~~~v~~~~ 151 (444)
T 2ixa_A 98 SSPWEWHHEHGVAAMKAGKIVGMEVSGAITLEECWDYVKVS-EQTGVPLMALENV 151 (444)
T ss_dssp CCCGGGHHHHHHHHHHTTCEEEECCCCCSSHHHHHHHHHHH-HHHCCCEEECCGG
T ss_pred cCCcHHHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHH-HHhCCeEEEEecc
Confidence 99999999999999999986532111234556777787776 566654 556543
No 72
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=98.35 E-value=7.3e-07 Score=86.27 Aligned_cols=119 Identities=12% Similarity=0.073 Sum_probs=84.2
Q ss_pred CcCCeEEEEeCCCCCcchH-HH----HHHHHcC-CeEE---------EeeCCCCCC-c---eecCcc-cccCHHHhhccC
Q 019500 39 VDKNTRVICQGITGKNGTF-HT----EQAIEYG-TKMV---------GGVTPKKGG-T---EHLGLP-VFNTVAEAKAET 98 (340)
Q Consensus 39 ~p~~iaViVvGasgk~G~~-v~----~~l~~~G-~~vv---------~~VnP~~~g-~---~i~G~p-~y~sl~dip~~~ 98 (340)
.++.++|.|+|+.|.+|+. ++ +.+.+.+ ..++ +.++++... + +-.|++ +|.+++++.+..
T Consensus 3 ~~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~ 82 (383)
T 3oqb_A 3 TTQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWTTDLDAALADK 82 (383)
T ss_dssp CCEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEESCHHHHHHCS
T ss_pred CCceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCC
Confidence 3567899999966999987 77 7666654 2211 345544310 1 235775 899999998765
Q ss_pred CCcEEEEecChhhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 99 KANASAIYVPPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 99 ~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
++|+++|++|+..+.+.+.+|+++|.+.++--.-..+.++.+++.+++ +++|+. .+|.|
T Consensus 83 ~iD~V~i~tp~~~h~~~~~~al~~Gk~V~~EKP~a~~~~~~~~l~~~a-~~~~~~~~v~~~ 142 (383)
T 3oqb_A 83 NDTMFFDAATTQARPGLLTQAINAGKHVYCEKPIATNFEEALEVVKLA-NSKGVKHGTVQD 142 (383)
T ss_dssp SCCEEEECSCSSSSHHHHHHHHTTTCEEEECSCSCSSHHHHHHHHHHH-HHTTCCEEECCG
T ss_pred CCCEEEECCCchHHHHHHHHHHHCCCeEEEcCCCCCCHHHHHHHHHHH-HHcCCeEEEEec
Confidence 799999999999999999999999987532112245667778888776 666754 45554
No 73
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=98.29 E-value=1.7e-06 Score=82.44 Aligned_cols=109 Identities=12% Similarity=0.135 Sum_probs=80.0
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCC--CCcee------cC--cccccCHHHhhccCCCcEEEEecChhh
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK--GGTEH------LG--LPVFNTVAEAKAETKANASAIYVPPPF 111 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~--~g~~i------~G--~p~y~sl~dip~~~~vDlavi~vp~~~ 111 (340)
+++|.|+|+ |.++..+++.+ ..++++++.+++.. ..+.. .| .++|.+++++.+..++|+++|++|+..
T Consensus 2 ~~rvgiiG~-G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~ 79 (337)
T 3ip3_A 2 SLKICVIGS-SGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTVFSL 79 (337)
T ss_dssp CEEEEEECS-SSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSSHHH
T ss_pred ceEEEEEcc-chhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCCcch
Confidence 478889999 66777777777 55788888887653 11111 24 479999999987447999999999999
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE
Q 019500 112 AAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR 153 (340)
Q Consensus 112 v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir 153 (340)
+.+.+.+|+++|.+.++=-.-..+.++.+++.+++ +++|..
T Consensus 80 H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a-~~~g~~ 120 (337)
T 3ip3_A 80 NGKILLEALERKIHAFVEKPIATTFEDLEKIRSVY-QKVRNE 120 (337)
T ss_dssp HHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHH-HHHTTT
T ss_pred HHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHH-HHhCCc
Confidence 99999999999987532112244556777887776 566654
No 74
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=98.28 E-value=6.3e-05 Score=75.15 Aligned_cols=250 Identities=13% Similarity=0.173 Sum_probs=146.0
Q ss_pred EEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecC----hhhHHHHHHHHH
Q 019500 45 VICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVP----PPFAAAAILEAM 120 (340)
Q Consensus 45 ViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp----~~~v~~~v~ea~ 120 (340)
|.++.-||.+++.+...+.+.|.-.-+.|.-.. +. ++..-+-|+-+.++.+.++++++.- +....++++.+
T Consensus 152 v~~vsqSG~~~~~~~~~~~~~g~G~s~~vs~G~--~~--~~~~~d~l~~~~~D~~t~~I~l~~E~i~~~~~f~~~a~~~- 226 (457)
T 2csu_A 152 VAFISQSGALGAGIVYKTIKEDIGFSKFISVGN--MA--DVDFAELMEYLADTEEDKAIALYIEGVRNGKKFMEVAKRV- 226 (457)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCEESEEEECTT--CC--SSCHHHHHHHHTTCSSCCEEEEEESCCSCHHHHHHHHHHH-
T ss_pred EEEEeCCHHHHHHHHHHHHhcCCCeeEEEECCC--cC--CCCHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHHHHHh-
Confidence 444588888888888777777654333444332 11 3322222333333335788888754 45556666666
Q ss_pred HcCCcEEEEecCCCChhhH-------------HHHHHHHhccCCcEEEccCCCCcccCCCcccccCCCCCCCCCcEEEEe
Q 019500 121 EAELDLVVCITEGIPQHDM-------------VRVKAALNNQSKTRLVGPNCPGVIKPGECKIGIMPGYIHKPGRIGIVS 187 (340)
Q Consensus 121 ~~Gvk~vvi~t~Gf~e~~~-------------~~l~~~aar~~girviGPNc~Gi~~p~~~~~~~~~~~~~~~G~valvS 187 (340)
..+.+. |++-+|-++... .+....+-|+.|+..+- +-.-+.. ....+.. ..++-++|++++
T Consensus 227 ~~~KPV-v~~k~G~~~~g~~aa~~Htgalag~~~~~~AafRqaGv~~v~-~~~El~~---~~~~l~~-~~~~g~rvaiit 300 (457)
T 2csu_A 227 TKKKPI-IALKAGKSESGARAASSHTGSLAGSWKIYEAAFKQSGVLVAN-TIDEMLS---MARAFSQ-PLPRGNKVAIMT 300 (457)
T ss_dssp HHHSCE-EEEECC------------------CHHHHHHHHHHTTCEEES-SHHHHHH---HHTTTTS-CCCSSSEEEEEE
T ss_pred cCCCCE-EEEEcCCCccccchhhcccCccCCcHHHHHHHHHhCCCeEEC-CHHHHHH---HHHHhcC-CCCCCCcEEEEE
Confidence 345555 555666543321 12222222677765331 1000000 0011111 234567899999
Q ss_pred cChHHHHHHHHHHHhCCCCc---------------------eEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEcc-
Q 019500 188 RSGTLTYEAVFQTTAVGLGQ---------------------STCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEI- 245 (340)
Q Consensus 188 QSG~l~~~~~~~~~~~giG~---------------------S~~vs~Gn~a~~dv~~~d~l~~l~~Dp~T~~I~ly~E~- 245 (340)
-||+++...+|.+.+.|+-+ ...+-+|.++. .-.+.+.++.+.+||++++|++.+-.
T Consensus 301 ngGG~~~laaD~~~~~Gl~l~~l~~~t~~~L~~~lp~~~~~~NPlDl~g~a~-~~~~~~al~~~l~dp~vd~vlv~~~~~ 379 (457)
T 2csu_A 301 NAGGPGVLTADELDKRGLKLATLEEKTIEELRSFLPPMAAVKNPVDMIASAR-GEDYYRTAKLLLQDPNVDMLIAICVVP 379 (457)
T ss_dssp SCHHHHHHHHHHHHTTTCEECCCCHHHHHHHHHHSCTTCEESSEEECCTTCC-HHHHHHHHHHHHHSTTCSEEEEEEECC
T ss_pred CCHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHhCccccccCCCeeCCCCCC-HHHHHHHHHHHhcCCCCCEEEEEcccc
Confidence 99999999999999888763 23555655531 23467889999999999999998731
Q ss_pred -CC-Cc-HHHHHHHHHHhC---CCCCEEEEEeCCCCCCCCcccccCcccccccccceecCCCCcHHHHHHHHHHcCCeec
Q 019500 246 -GG-TA-EEDAAALIKESG---TEKPIVAFIAGLTAPPGRRMGHAGVDVYTIFGSAIVSGGKGTAQDKIKTLREAGVTVV 319 (340)
Q Consensus 246 -~g-~~-~~~~~~f~~a~r---~~KPVvvlk~Grs~~~g~~~sHtg~~~~~~~~~ala~~~~g~~~~~~a~~~qaGvv~v 319 (340)
.| .. ...+..+.++++ .+|||++...+.+.. +.....|+++|+...
T Consensus 380 ~~Gg~~~~~~a~~i~~al~~~~~~kPvvv~~~~g~~~----------------------------~~~~~~L~~~Gip~~ 431 (457)
T 2csu_A 380 TFAGMTLTEHAEGIIRAVKEVNNEKPVLAMFMAGYVS----------------------------EKAKELLEKNGIPTY 431 (457)
T ss_dssp CSTTCCSSHHHHHHHHHHHHHCCCCCEEEEEECTTTT----------------------------HHHHHHHHTTTCCEE
T ss_pred ccccCCchhHHHHHHHHHHHhcCCCCEEEEeCCCcch----------------------------HHHHHHHHhCCCCcc
Confidence 11 11 233444554433 679999965442211 224567889999999
Q ss_pred CCHHHHHHHHHHHHH
Q 019500 320 ESPAKIGAAMLEVFK 334 (340)
Q Consensus 320 ~~~~el~~~~~~~~~ 334 (340)
+++++-..++..+.+
T Consensus 432 ~spe~Av~al~~l~~ 446 (457)
T 2csu_A 432 ERPEDVASAAYALVE 446 (457)
T ss_dssp SSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999988877654
No 75
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=98.13 E-value=1.7e-05 Score=76.15 Aligned_cols=158 Identities=15% Similarity=0.058 Sum_probs=102.6
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHc---------CCeEEEeeCCCCCCcee-------------cCccccc--CHHHhhcc
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEY---------GTKMVGGVTPKKGGTEH-------------LGLPVFN--TVAEAKAE 97 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~---------G~~vv~~VnP~~~g~~i-------------~G~p~y~--sl~dip~~ 97 (340)
+++|.|+|+ |++|+.+++.+.+. +.++++..+++. ... ...++|. +++++.+.
T Consensus 2 mirvgIiG~-G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~--~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~ 78 (327)
T 3do5_A 2 MIKIAIVGF-GTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKS--SISGDFSLVEALRMKRETGMLRDDAKAIEVVRS 78 (327)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSC--EEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHH
T ss_pred cEEEEEEec-cHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCCh--HhccccCHHHHHhhhccCccccCCCCHHHHhcC
Confidence 478899998 99999999877653 567888888764 221 1134676 99998865
Q ss_pred CCCcEEEEecChhhH----HHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCCCCcccCC--Ccccc
Q 019500 98 TKANASAIYVPPPFA----AAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPG--ECKIG 171 (340)
Q Consensus 98 ~~vDlavi~vp~~~v----~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc~Gi~~p~--~~~~~ 171 (340)
.++|++++++|++.+ .+.+.+|+++|.+.+. -..+--..+..+|.+++ +++|..+.=.-+.|-..|. .++-
T Consensus 79 ~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~-~NKkpla~~~~eL~~~A-~~~g~~~~~ea~v~~g~Pii~~l~~- 155 (327)
T 3do5_A 79 ADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVT-SNKGPLVAEFHGLMSLA-ERNGVRLMYEATVGGAMPVVKLAKR- 155 (327)
T ss_dssp SCCSEEEECCCCC----CHHHHHHHHHTTTCEEEE-CCSHHHHHHHHHHHHHH-HHTTCCEECGGGSSTTSCCHHHHHT-
T ss_pred CCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEe-cCchhhHHHHHHHHHHH-HhhCCcEEEEEEeeecCHHHHHHHH-
Confidence 579999999999875 8899999999998632 21121112456676665 7888877644444444454 1111
Q ss_pred cCCCCCCCCCcEEEEe--cChHHHHHHHHHHHhCCCCceEEe
Q 019500 172 IMPGYIHKPGRIGIVS--RSGTLTYEAVFQTTAVGLGQSTCV 211 (340)
Q Consensus 172 ~~~~~~~~~G~valvS--QSG~l~~~~~~~~~~~giG~S~~v 211 (340)
....+.|.=|. .||+..+ ++....+.|..|+.++
T Consensus 156 -----~l~~~~I~~I~GIlnGT~ny-ilt~m~~~g~~f~~~l 191 (327)
T 3do5_A 156 -----YLALCEIESVKGIFNGTCNY-ILSRMEEERLPYEHIL 191 (327)
T ss_dssp -----TTTTSCEEEEEEECCHHHHH-HHHHHHHHCCCHHHHH
T ss_pred -----HhhCCCccEEEEEECCCcCc-chhhcCcCCcCHHHHH
Confidence 12346666555 3888655 4444445677777655
No 76
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.10 E-value=6.7e-06 Score=77.72 Aligned_cols=107 Identities=7% Similarity=0.003 Sum_probs=76.0
Q ss_pred eEEEEeCCCCCcch-HHHHHHHHc-CCeEEEeeCCCCCC-c---eecCccc-ccC-HHHhhccCCCcEEEEecChhhHHH
Q 019500 43 TRVICQGITGKNGT-FHTEQAIEY-GTKMVGGVTPKKGG-T---EHLGLPV-FNT-VAEAKAETKANASAIYVPPPFAAA 114 (340)
Q Consensus 43 iaViVvGasgk~G~-~v~~~l~~~-G~~vv~~VnP~~~g-~---~i~G~p~-y~s-l~dip~~~~vDlavi~vp~~~v~~ 114 (340)
++|.|+|+ |++|+ .+++.+.+. +++++ .++++... + +-.|++. |.+ .+.+ .+ ++|++++++|+..+.+
T Consensus 3 ~~igiIG~-G~ig~~~~~~~l~~~~~~~l~-v~d~~~~~~~~~a~~~g~~~~~~~~~~~l-~~-~~D~V~i~tp~~~h~~ 78 (323)
T 1xea_A 3 LKIAMIGL-GDIAQKAYLPVLAQWPDIELV-LCTRNPKVLGTLATRYRVSATCTDYRDVL-QY-GVDAVMIHAATDVHST 78 (323)
T ss_dssp EEEEEECC-CHHHHHTHHHHHTTSTTEEEE-EECSCHHHHHHHHHHTTCCCCCSSTTGGG-GG-CCSEEEECSCGGGHHH
T ss_pred cEEEEECC-CHHHHHHHHHHHHhCCCceEE-EEeCCHHHHHHHHHHcCCCccccCHHHHh-hc-CCCEEEEECCchhHHH
Confidence 67888899 99998 488888775 67877 77776410 1 1246664 544 4444 32 6999999999999999
Q ss_pred HHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEE
Q 019500 115 AILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRL 154 (340)
Q Consensus 115 ~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girv 154 (340)
.+.+|+++|.+.++--....+.++.+++.+++ +++|+.+
T Consensus 79 ~~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a-~~~g~~~ 117 (323)
T 1xea_A 79 LAAFFLHLGIPTFVDKPLAASAQECENLYELA-EKHHQPL 117 (323)
T ss_dssp HHHHHHHTTCCEEEESCSCSSHHHHHHHHHHH-HHTTCCE
T ss_pred HHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHH-HhcCCeE
Confidence 99999999987643222345566777787776 6677653
No 77
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=98.07 E-value=4.4e-06 Score=83.30 Aligned_cols=111 Identities=14% Similarity=0.046 Sum_probs=77.9
Q ss_pred cCCeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCCC-ce----ecC----------------------cccccCH
Q 019500 40 DKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-TE----HLG----------------------LPVFNTV 91 (340)
Q Consensus 40 p~~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~g-~~----i~G----------------------~p~y~sl 91 (340)
.+.++|.|+|+ |++|+.+++.+.+. ++++++.++++... +. ..| .++|.++
T Consensus 21 ~k~IRVGIIGa-G~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~ 99 (446)
T 3upl_A 21 GKPIRIGLIGA-GEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDN 99 (446)
T ss_dssp TCCEEEEEECC-SHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCH
T ss_pred CCceEEEEECC-hHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCH
Confidence 35799999999 99999999887764 77888777765410 11 113 4689999
Q ss_pred HHhhccCCCcEEEEecCh-hhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE
Q 019500 92 AEAKAETKANASAIYVPP-PFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR 153 (340)
Q Consensus 92 ~dip~~~~vDlavi~vp~-~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir 153 (340)
+++.+..++|++++++|. +.+.+.+.+|+++|.+.+. .......++..+|.+++ +++|+.
T Consensus 100 eeLL~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~-~nk~l~~~eg~eL~~~A-~e~Gvv 160 (446)
T 3upl_A 100 DLILSNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVM-MNVEADVTIGPYLKAQA-DKQGVI 160 (446)
T ss_dssp HHHHTCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEE-CCHHHHHHHHHHHHHHH-HHHTCC
T ss_pred HHHhcCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEe-cCcccCHHHHHHHHHHH-HHhCCe
Confidence 999876579999999975 6788999999999988643 33322223344555554 555544
No 78
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.95 E-value=1.4e-05 Score=79.72 Aligned_cols=162 Identities=12% Similarity=0.041 Sum_probs=105.7
Q ss_pred cCCeEEEEeCCCCCcchHHHHHHHH----------cCCeEEEeeCCCCCC-ce-ecCcccccCHHHhhccCCCcEEEEec
Q 019500 40 DKNTRVICQGITGKNGTFHTEQAIE----------YGTKMVGGVTPKKGG-TE-HLGLPVFNTVAEAKAETKANASAIYV 107 (340)
Q Consensus 40 p~~iaViVvGasgk~G~~v~~~l~~----------~G~~vv~~VnP~~~g-~~-i~G~p~y~sl~dip~~~~vDlavi~v 107 (340)
.+.++|.|+|+ |++|+.+++.+.+ .++++++.++++... .. ..+.+.|.+++++.+..++|++++++
T Consensus 8 Mk~irIgIIG~-G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~~~~~~~d~~ell~d~diDvVve~t 86 (444)
T 3mtj_A 8 MKPIHVGLLGL-GTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAGGLPLTTNPFDVVDDPEIDIVVELI 86 (444)
T ss_dssp CSCEEEEEECC-HHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHTTCCEESCTHHHHTCTTCCEEEECC
T ss_pred hCcccEEEECC-CHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcccCcccCCHHHHhcCCCCCEEEEcC
Confidence 35689999998 9999888776543 256788788876410 11 24667899999998765799999999
Q ss_pred Ch-hhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCCCCcccCC--CcccccCCCCCCCCCcEE
Q 019500 108 PP-PFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPG--ECKIGIMPGYIHKPGRIG 184 (340)
Q Consensus 108 p~-~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc~Gi~~p~--~~~~~~~~~~~~~~G~va 184 (340)
|. +.+.+.+.+|+++|.+. +.-......++..+|.+++ +++|..+.-..+.|-..|. .++- ....|.|+
T Consensus 87 p~~~~h~~~~~~AL~aGKhV-vtenkal~a~~~~eL~~~A-~~~gv~l~~Ea~V~~giPii~~Lre------lL~~~~Ig 158 (444)
T 3mtj_A 87 GGLEPARELVMQAIANGKHV-VTANKHLVAKYGNEIFAAA-QAKGVMVTFEAAVAGGIPIIKALRE------GLTANRIE 158 (444)
T ss_dssp CSSTTHHHHHHHHHHTTCEE-EECCHHHHHHHHHHHHHHH-HHHTCCEECGGGSSTTSCHHHHHHT------TTTTSCEE
T ss_pred CCchHHHHHHHHHHHcCCEE-EECCcccCHHHHHHHHHHH-HHhCCeEEEEEeeeCChHHHHHHHH------HHhCCCCc
Confidence 96 89999999999999876 3222332234456777766 7788877422222222342 1111 13346666
Q ss_pred EEe--cChHHHHHHHHHHHhCCCCceEEe
Q 019500 185 IVS--RSGTLTYEAVFQTTAVGLGQSTCV 211 (340)
Q Consensus 185 lvS--QSG~l~~~~~~~~~~~giG~S~~v 211 (340)
=|. -||+..+-+ ....+.|..|+.++
T Consensus 159 ~I~GIlnGT~nyil-t~m~~~g~~f~~~l 186 (444)
T 3mtj_A 159 WLAGIINGTSNFIL-SEMRDKGAAFDDVL 186 (444)
T ss_dssp EEEEECCHHHHHHH-HHHHHHCCCHHHHH
T ss_pred eEEEEEcCCccccc-ccCCCCCCCHHHHH
Confidence 554 477766544 44445688887766
No 79
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=97.93 E-value=1.7e-05 Score=73.44 Aligned_cols=108 Identities=13% Similarity=0.131 Sum_probs=84.9
Q ss_pred cCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChhhHHHHHHHH
Q 019500 40 DKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEA 119 (340)
Q Consensus 40 p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ea 119 (340)
...++|+++|. |++|+.+++. . ++++++..+ .+. .++ |+.++.+++++.. ++|+++-|.+++.+.+.+..+
T Consensus 10 ~~~~rV~i~G~-GaIG~~v~~~--~-~leLv~v~~-~k~-gel-gv~a~~d~d~lla--~pD~VVe~A~~~av~e~~~~i 80 (253)
T 1j5p_A 10 HHHMTVLIIGM-GNIGKKLVEL--G-NFEKIYAYD-RIS-KDI-PGVVRLDEFQVPS--DVSTVVECASPEAVKEYSLQI 80 (253)
T ss_dssp -CCCEEEEECC-SHHHHHHHHH--S-CCSEEEEEC-SSC-CCC-SSSEECSSCCCCT--TCCEEEECSCHHHHHHHHHHH
T ss_pred cccceEEEECc-CHHHHHHHhc--C-CcEEEEEEe-ccc-ccc-CceeeCCHHHHhh--CCCEEEECCCHHHHHHHHHHH
Confidence 34689999999 9999999987 4 888887766 332 345 8888999999985 699999999999999999999
Q ss_pred HHcCCcEEEEecCC-CChhh-HHHHHHHHhccCCcEEEccC
Q 019500 120 MEAELDLVVCITEG-IPQHD-MVRVKAALNNQSKTRLVGPN 158 (340)
Q Consensus 120 ~~~Gvk~vvi~t~G-f~e~~-~~~l~~~aar~~girviGPN 158 (340)
+++|+..+ +.+.| +.+.+ .++|.+++ +++|-++..|.
T Consensus 81 L~aG~dvv-~~S~gaLad~~l~~~L~~aA-~~gg~~l~vpS 119 (253)
T 1j5p_A 81 LKNPVNYI-IISTSAFADEVFRERFFSEL-KNSPARVFFPS 119 (253)
T ss_dssp TTSSSEEE-ECCGGGGGSHHHHHHHHHHH-HTCSCEEECCC
T ss_pred HHCCCCEE-EcChhhhcCHHHHHHHHHHH-HHCCCeEEecC
Confidence 99999974 46666 44444 45566665 88998987665
No 80
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=97.88 E-value=6.1e-05 Score=71.33 Aligned_cols=111 Identities=12% Similarity=0.091 Sum_probs=74.9
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ce--ecCcccccCHHHhhccCCCcEEEEecCh-hhHHHHH
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPVFNTVAEAKAETKANASAIYVPP-PFAAAAI 116 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~--i~G~p~y~sl~dip~~~~vDlavi~vp~-~~v~~~v 116 (340)
+..+|.|+|+ |.||..++++|.+.|+++. .+|++... ++ -.|+..+.+++++.+ +.|++++++|. ..+.+++
T Consensus 30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~-~~dr~~~~~~~l~~~g~~~~~~~~e~~~--~aDvVi~~vp~~~~~~~v~ 105 (320)
T 4dll_A 30 YARKITFLGT-GSMGLPMARRLCEAGYALQ-VWNRTPARAASLAALGATIHEQARAAAR--DADIVVSMLENGAVVQDVL 105 (320)
T ss_dssp CCSEEEEECC-TTTHHHHHHHHHHTTCEEE-EECSCHHHHHHHHTTTCEEESSHHHHHT--TCSEEEECCSSHHHHHHHH
T ss_pred CCCEEEEECc-cHHHHHHHHHHHhCCCeEE-EEcCCHHHHHHHHHCCCEeeCCHHHHHh--cCCEEEEECCCHHHHHHHH
Confidence 4457888899 9999999999999999855 66765410 11 137788889999886 58999999995 4555555
Q ss_pred H--HHHHc-CCcEEEEecCCCChhhHHHHHHHHhccCCcEEEc
Q 019500 117 L--EAMEA-ELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (340)
Q Consensus 117 ~--ea~~~-Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviG 156 (340)
. +..+. .-..+++-++..+....+++.+.+ ++.|+.++.
T Consensus 106 ~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~-~~~g~~~~~ 147 (320)
T 4dll_A 106 FAQGVAAAMKPGSLFLDMASITPREARDHAARL-GALGIAHLD 147 (320)
T ss_dssp TTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHH-HHTTCEEEE
T ss_pred cchhHHhhCCCCCEEEecCCCCHHHHHHHHHHH-HHcCCEEEe
Confidence 4 33332 233344445555555555565555 566787764
No 81
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=97.86 E-value=3.3e-05 Score=63.79 Aligned_cols=86 Identities=10% Similarity=0.141 Sum_probs=65.8
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCC--CCceecCcccccCHHHhh---ccCCCcEEEEecChh---h
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKK--GGTEHLGLPVFNTVAEAK---AETKANASAIYVPPP---F 111 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~--~g~~i~G~p~y~sl~dip---~~~~vDlavi~vp~~---~ 111 (340)
+..+|+|+|+ |..|..+++.+.+. ||++++.++++. .|..+.|+|+|. ++++. .+..+|.+++++|.. .
T Consensus 3 ~~~~vlIiGa-G~~g~~l~~~l~~~~g~~vvg~~d~~~~~~g~~i~g~pV~g-~~~l~~~~~~~~id~viia~~~~~~~~ 80 (141)
T 3nkl_A 3 AKKKVLIYGA-GSAGLQLANMLRQGKEFHPIAFIDDDRKKHKTTMQGITIYR-PKYLERLIKKHCISTVLLAVPSASQVQ 80 (141)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHSSSEEEEEEECSCGGGTTCEETTEEEEC-GGGHHHHHHHHTCCEEEECCTTSCHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCcEEEEEEECCcccCCCEecCeEEEC-HHHHHHHHHHCCCCEEEEeCCCCCHHH
Confidence 4557889999 88899999988875 899888887653 345789999987 55554 344699999999854 3
Q ss_pred HHHHHHHHHHcCCcEEE
Q 019500 112 AAAAILEAMEAELDLVV 128 (340)
Q Consensus 112 v~~~v~ea~~~Gvk~vv 128 (340)
..++++.|.+.|++..+
T Consensus 81 ~~~i~~~l~~~gv~v~~ 97 (141)
T 3nkl_A 81 KKVIIESLAKLHVEVLT 97 (141)
T ss_dssp HHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHcCCeEEE
Confidence 47888899999998644
No 82
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=97.85 E-value=4e-05 Score=72.23 Aligned_cols=127 Identities=14% Similarity=0.088 Sum_probs=76.3
Q ss_pred CCCCCCCCCcccccCcCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ce--ecCcccccCHHHhhccCCCc
Q 019500 25 RSFTTAPPPAPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPVFNTVAEAKAETKAN 101 (340)
Q Consensus 25 ~~~~~~~~~l~~lf~p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~--i~G~p~y~sl~dip~~~~vD 101 (340)
.||.-.+|+...--..+..+|.|+|+ |.||..++++|.+.|+++. ..|++... +. -.|+..+.+++++.+ +.|
T Consensus 4 ~~~~~~~~~~~~~~~~~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~-~~dr~~~~~~~l~~~g~~~~~~~~~~~~--~aD 79 (310)
T 3doj_A 4 SHHHHHHSSGLVPRGSHMMEVGFLGL-GIMGKAMSMNLLKNGFKVT-VWNRTLSKCDELVEHGASVCESPAEVIK--KCK 79 (310)
T ss_dssp --------------CCCSCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSGGGGHHHHHTTCEECSSHHHHHH--HCS
T ss_pred cccccccccccCcccccCCEEEEECc-cHHHHHHHHHHHHCCCeEE-EEeCCHHHHHHHHHCCCeEcCCHHHHHH--hCC
Confidence 34444444333333445678888999 9999999999999999855 56665410 11 247788889999876 489
Q ss_pred EEEEecChh-hHHHHH---HHHHHc-CCcEEEEecCCCChhhHHHHHHHHhccCCcEEEc
Q 019500 102 ASAIYVPPP-FAAAAI---LEAMEA-ELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (340)
Q Consensus 102 lavi~vp~~-~v~~~v---~ea~~~-Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviG 156 (340)
++++++|.. .+.+++ ++..+. .-..+++-++.......+++.+.+ ++.|+.++.
T Consensus 80 vvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~-~~~g~~~v~ 138 (310)
T 3doj_A 80 YTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAI-TGKGGRFVE 138 (310)
T ss_dssp EEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHH-HHTTCEEEE
T ss_pred EEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHH-HHcCCEEEe
Confidence 999999864 555555 333322 123345555555555555666555 566887775
No 83
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=97.82 E-value=7.7e-05 Score=71.44 Aligned_cols=157 Identities=17% Similarity=0.137 Sum_probs=99.1
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHc-------CCeEEEeeCCCCCCcee---------------cC-cc--cccCHHHhh
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEY-------GTKMVGGVTPKKGGTEH---------------LG-LP--VFNTVAEAK 95 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~-------G~~vv~~VnP~~~g~~i---------------~G-~p--~y~sl~dip 95 (340)
+.++|.|+|+ |++|+.+++.+.+. ++++++..|.+. ... .| ++ .| +..++.
T Consensus 3 k~irVgIiG~-G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~--~~~~~~idl~~~~~~~~~~g~~~~~~~-d~~e~l 78 (325)
T 3ing_A 3 KEIRIILMGT-GNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRS--YASGRNLDISSIISNKEKTGRISDRAF-SGPEDL 78 (325)
T ss_dssp CEEEEEEECC-SHHHHHHHHHHHHHHHHC--CEEEEEEEECSSB--EEECSSCCHHHHHHHHHHHSCSCSSBC-CSGGGG
T ss_pred ceEEEEEEcC-cHHHHHHHHHHHhchhhccCCCEEEEEEEecCh--hhcccccCHHHHHHHhhhcCCCCcccC-CHHHHh
Confidence 4688999998 99999999988763 456887777653 111 12 22 23 556666
Q ss_pred ccCCCcEEEEecChhhH----HHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCCCCcccCC--Ccc
Q 019500 96 AETKANASAIYVPPPFA----AAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPG--ECK 169 (340)
Q Consensus 96 ~~~~vDlavi~vp~~~v----~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc~Gi~~p~--~~~ 169 (340)
...++|++++++|+..+ .+.+.+|+++|++.+. -..+.-.++..+|.+++ +++|..+.=.-+.|--.|- .++
T Consensus 79 ~~~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVt-aNK~~la~~~~eL~~lA-~~~g~~~~~Ea~vg~giPii~~l~ 156 (325)
T 3ing_A 79 MGEAADLLVDCTPASRDGVREYSLYRMAFESGMNVVT-ANKSGLANKWHDIMDSA-NQNSKYIRYEATVAGGVPLFSVLD 156 (325)
T ss_dssp TTSCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEE-CCCHHHHHHHHHHHHHH-HHHTCCEECGGGSSTTSCCHHHHH
T ss_pred cCCCCCEEEECCCCccccchHHHHHHHHHHCCCeEEE-cCchhHHHHHHHHHHHH-HHcCCeEEEEeeecccCHHHHHHH
Confidence 54579999999997533 5889999999998632 22332224556677765 7788876644444444454 111
Q ss_pred cccCCCCCCCCCcEEEEe--cChHHHHHHHHHHHhCCCCceEEe
Q 019500 170 IGIMPGYIHKPGRIGIVS--RSGTLTYEAVFQTTAVGLGQSTCV 211 (340)
Q Consensus 170 ~~~~~~~~~~~G~valvS--QSG~l~~~~~~~~~~~giG~S~~v 211 (340)
-. ...+.|.-|. -||+..+ +++.. +.|..|+.++
T Consensus 157 ~~------l~g~~I~~i~Gi~nGT~ny-il~~m-~~g~~f~~~l 192 (325)
T 3ing_A 157 YS------ILPSKVKRFRGIVSSTINY-VIRNM-ANGRSLRDVV 192 (325)
T ss_dssp HT------CTTCCEEEEEEECCHHHHH-HHHHH-HTTCCHHHHH
T ss_pred HH------hhCCCeeEEEEEEEeeeeE-Eeecc-cCCCCHHHHH
Confidence 11 2336666664 6887655 44444 5677766544
No 84
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=97.81 E-value=6.3e-05 Score=69.80 Aligned_cols=109 Identities=14% Similarity=0.100 Sum_probs=75.6
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ce--ecCcccccCHHHhhccCCCcEEEEecC-hhhHHHHH--
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPVFNTVAEAKAETKANASAIYVP-PPFAAAAI-- 116 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~--i~G~p~y~sl~dip~~~~vDlavi~vp-~~~v~~~v-- 116 (340)
.+|.|+|+ |+||..+.++|.+.|++++ ..|++... +. -.|+..+.+++++.+ +.|++++++| +..+.+++
T Consensus 2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~-~~dr~~~~~~~~~~~g~~~~~~~~~~~~--~aDvvi~~vp~~~~~~~v~~~ 77 (287)
T 3pef_A 2 QKFGFIGL-GIMGSAMAKNLVKAGCSVT-IWNRSPEKAEELAALGAERAATPCEVVE--SCPVTFAMLADPAAAEEVCFG 77 (287)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSGGGGHHHHHTTCEECSSHHHHHH--HCSEEEECCSSHHHHHHHHHS
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCeEE-EEcCCHHHHHHHHHCCCeecCCHHHHHh--cCCEEEEEcCCHHHHHHHHcC
Confidence 36777899 9999999999999999865 66765410 11 147888899999876 4899999999 56777777
Q ss_pred -HHHHHc-CCcEEEEecCCCChhhHHHHHHHHhccCCcEEEc
Q 019500 117 -LEAMEA-ELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (340)
Q Consensus 117 -~ea~~~-Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviG 156 (340)
++..+. .-..+++-+++......+++.+.+ ++.|+.++.
T Consensus 78 ~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~-~~~g~~~~~ 118 (287)
T 3pef_A 78 KHGVLEGIGEGRGYVDMSTVDPATSQRIGVAV-VAKGGRFLE 118 (287)
T ss_dssp TTCHHHHCCTTCEEEECSCCCHHHHHHHHHHH-HHTTCEEEE
T ss_pred cchHhhcCCCCCEEEeCCCCCHHHHHHHHHHH-HHhCCEEEE
Confidence 544432 223345555666656556666555 456777764
No 85
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=97.78 E-value=0.00012 Score=68.18 Aligned_cols=92 Identities=14% Similarity=0.122 Sum_probs=68.4
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCC---eEEEeeCCCCCC-ce---ecCcccccCHHHhhccCCCcEEEEecChhhHHHH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGT---KMVGGVTPKKGG-TE---HLGLPVFNTVAEAKAETKANASAIYVPPPFAAAA 115 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~---~vv~~VnP~~~g-~~---i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~ 115 (340)
.+|.|+|+ |+||+.+++.|.+.|+ ++. ..|++... +. -.|+.++.+..+..+ +.|++++++|++.+.++
T Consensus 4 ~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~-v~dr~~~~~~~l~~~~gi~~~~~~~~~~~--~aDvVilav~p~~~~~v 79 (280)
T 3tri_A 4 SNITFIGG-GNMARNIVVGLIANGYDPNRIC-VTNRSLDKLDFFKEKCGVHTTQDNRQGAL--NADVVVLAVKPHQIKMV 79 (280)
T ss_dssp SCEEEESC-SHHHHHHHHHHHHTTCCGGGEE-EECSSSHHHHHHHHTTCCEEESCHHHHHS--SCSEEEECSCGGGHHHH
T ss_pred CEEEEEcc-cHHHHHHHHHHHHCCCCCCeEE-EEeCCHHHHHHHHHHcCCEEeCChHHHHh--cCCeEEEEeCHHHHHHH
Confidence 35667799 9999999999999988 544 67766410 11 248888888888776 58999999999999999
Q ss_pred HHHHHHc--CCc-EEEEecCCCChhh
Q 019500 116 ILEAMEA--ELD-LVVCITEGIPQHD 138 (340)
Q Consensus 116 v~ea~~~--Gvk-~vvi~t~Gf~e~~ 138 (340)
+++.... .-+ .++-+++|++.+.
T Consensus 80 l~~l~~~~l~~~~iiiS~~agi~~~~ 105 (280)
T 3tri_A 80 CEELKDILSETKILVISLAVGVTTPL 105 (280)
T ss_dssp HHHHHHHHHTTTCEEEECCTTCCHHH
T ss_pred HHHHHhhccCCCeEEEEecCCCCHHH
Confidence 9887653 333 5555678987543
No 86
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=97.78 E-value=8e-05 Score=71.34 Aligned_cols=159 Identities=15% Similarity=0.020 Sum_probs=98.3
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHc--------CCeEEEeeCCCCCC-ce-e-----------cCcc-ccc---CHHHhh
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEY--------GTKMVGGVTPKKGG-TE-H-----------LGLP-VFN---TVAEAK 95 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~--------G~~vv~~VnP~~~g-~~-i-----------~G~p-~y~---sl~dip 95 (340)
+.++|.|+|+ |.+|+.+++.+.+. ++++++..+++... .+ + .+++ .|. +++++.
T Consensus 5 ~~irvgIiG~-G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll 83 (331)
T 3c8m_A 5 KTINLSIFGL-GNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEAL 83 (331)
T ss_dssp EEEEEEEECC-SHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHH
T ss_pred cEEeEEEEec-CHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHh
Confidence 3588999999 99999999887663 35777777765410 11 1 1333 565 899987
Q ss_pred ccCCCcEEEEecChh----hHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCCCCcccCC--Ccc
Q 019500 96 AETKANASAIYVPPP----FAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPG--ECK 169 (340)
Q Consensus 96 ~~~~vDlavi~vp~~----~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc~Gi~~p~--~~~ 169 (340)
..++|++++++|+. .+.+.+.+|+++|.+.+. ...+.-.++..+|.+++ +++|+++.-..+.|--.|. .++
T Consensus 84 -~~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGkhVvt-anK~pla~~~~eL~~~A-~~~gv~~~~ea~vg~giPii~~l~ 160 (331)
T 3c8m_A 84 -ARDFDIVVDATPASADGKKELAFYKETFENGKDVVT-ANKSGLANFWPEIMEYA-RSNNRRIRYEATVAGGVPLFSFID 160 (331)
T ss_dssp -HSSCSEEEECSCCCSSSHHHHHHHHHHHHTTCEEEE-CCCHHHHHHHHHHHHHH-HHHTCCEECGGGSSTTSCCHHHHH
T ss_pred -CCCCCEEEECCCCCCccchHHHHHHHHHHCCCeEEe-cCchhhHHHHHHHHHHH-HHcCCEEEEEeecccccHHHHHHH
Confidence 44799999999995 888899999999988632 11221123456676665 6778766544334333343 111
Q ss_pred cccCCCCCCCCCcEEEE--ecChHHHHHHHHHHHhCCCCceEEe
Q 019500 170 IGIMPGYIHKPGRIGIV--SRSGTLTYEAVFQTTAVGLGQSTCV 211 (340)
Q Consensus 170 ~~~~~~~~~~~G~valv--SQSG~l~~~~~~~~~~~giG~S~~v 211 (340)
-.. ..+.|.-| -.+|+..+- +... +.|..|+.++
T Consensus 161 ~~l------~g~~I~~I~GI~nGT~nyi-l~~m-~~g~~f~~~l 196 (331)
T 3c8m_A 161 YSV------LPSRIKKFRGIVSLTINYF-IREL-ANKREFDDVL 196 (331)
T ss_dssp HHS------TTCCCCEEEEECCHHHHHH-HHHH-HTTCCHHHHH
T ss_pred HHh------hcCcccEEEEEEeccceeE-ecch-hcCCCHHHHH
Confidence 111 22445444 246777543 3333 5677776655
No 87
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=97.71 E-value=0.001 Score=66.82 Aligned_cols=250 Identities=16% Similarity=0.125 Sum_probs=137.7
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCC--CceecCcccccCHHHhhccCCCcEEEEecC--hh-hHHHHHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKG--GTEHLGLPVFNTVAEAKAETKANASAIYVP--PP-FAAAAILE 118 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~--g~~i~G~p~y~sl~dip~~~~vDlavi~vp--~~-~v~~~v~e 118 (340)
+|.++.-||.+++.+...+.+.|.-.-+.|.-... ..++.|+..-.-|+-+.+..+.++++++.- .+ ...+.++.
T Consensus 114 ~vaivSqSGal~~~i~~~~~~~g~G~S~~Vs~Gn~~l~~~i~dv~~~D~l~~l~~Dp~T~~I~ly~E~~~e~~~~~f~~~ 193 (480)
T 3dmy_A 114 NIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNA 193 (480)
T ss_dssp EEEEEESCSHHHHHHHHHHHHTTCCEEEEEECCTTTTSTTTTTHHHHHHHHHHHTCTTCCEEEEEESCCCHHHHHHHHHH
T ss_pred CEEEEeccHHHHHHHHHHHHHcCCCceEEEEcCCCccccccCCCCHHHHHHHHhcCCCCCEEEEEEecCCcHHHHHHHHH
Confidence 35555999999888888887765543333443220 013455543333444444345788888872 12 22345555
Q ss_pred HHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCCCCcccCCCcccc-------cCCCCCCCCCcEEEEecChH
Q 019500 119 AMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPGECKIG-------IMPGYIHKPGRIGIVSRSGT 191 (340)
Q Consensus 119 a~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc~Gi~~p~~~~~~-------~~~~~~~~~G~valvSQSG~ 191 (340)
+-+.+.+. |++-+|-++.+ . |+.|+-.+ .+.--+++...+ +. ..| .++-.++++||-||+
T Consensus 194 ar~~~KPV-V~~k~Grs~~g-------~-r~~Gvirv-~~~~el~~~a~~-l~~~~~~~~~qp--~~~G~rvaivtn~Gg 260 (480)
T 3dmy_A 194 MKATGKPT-VALFLGYTPAV-------A-RDENVWFA-SSLDEAARLACL-LSRVTARRNAIA--PVSSGFICGLYTGGT 260 (480)
T ss_dssp HHHHCSCE-EEEETTCCCSS-------S-EETTEEEE-SSHHHHHHHHHH-HHHHHHHHHHHC--CCSCCEEEEEESCHH
T ss_pred HHhCCCCE-EEEEeCCCCcc-------c-ccCCEEEE-CCHHHHHHHHHH-HhcCccccccCC--CCCCCeEEEEECCHH
Confidence 54566555 55666655433 0 22332111 000000000000 00 011 134457999999999
Q ss_pred HHHHHHHHHHhCCCCce----------------EEe-------ecCCCCCCCC----CHHHHHHHhhcCCCccEEEE-EE
Q 019500 192 LTYEAVFQTTAVGLGQS----------------TCV-------GIGGDPFNGT----NFVDCVTKFIADPQTEGIIL-IG 243 (340)
Q Consensus 192 l~~~~~~~~~~~giG~S----------------~~v-------s~Gn~a~~dv----~~~d~l~~l~~Dp~T~~I~l-y~ 243 (340)
++....+.+.+ |+++- ..+ |.||-. |+ .+.+.|+-+.+||++.+|++ |+
T Consensus 261 ~gvlaaD~~~~-gl~l~~ls~~t~~~l~~~~~~~l~~~lp~~~s~~NPv--D~~d~~~~~~al~~~l~D~~vd~vlv~~v 337 (480)
T 3dmy_A 261 LAAEAAGLLAG-HLGVEADDTHQHGMMLDADSHQIIDLGDDFYTVGRPH--PMIDPTLRNQLIADLGAKPQVRVLLLDVV 337 (480)
T ss_dssp HHHHHHHHHHH-HTTCC---CCGGGEEEEETTEEEEETTSHHHHTTSCC--TTTCCHHHHHHHHHGGGCTTEEEEEEEEE
T ss_pred HHHHHHHHHHh-CCCCCCCCHHHHhhhhhhhhccHHHhCcchhhccCCc--CCCCHHHHHHHHHHHhcCCCCCEEEEEee
Confidence 99999999887 66653 333 344543 33 36788999999999998887 23
Q ss_pred ccCC---Cc-HHHHHHHHHHhC-C--CCC--EEEEEeCCCCCCCCcccccCcccccccccceecCCCCcHHHHHHHHHHc
Q 019500 244 EIGG---TA-EEDAAALIKESG-T--EKP--IVAFIAGLTAPPGRRMGHAGVDVYTIFGSAIVSGGKGTAQDKIKTLREA 314 (340)
Q Consensus 244 E~~g---~~-~~~~~~f~~a~r-~--~KP--Vvvlk~Grs~~~g~~~sHtg~~~~~~~~~ala~~~~g~~~~~~a~~~qa 314 (340)
-+.+ ++ ..-++.+.++.+ . +|| ++++-.|.... . ...+.....|+++
T Consensus 338 ~~~~~~~d~~~~~a~ai~~~~~~~~~~kp~v~v~~~~g~~~~-~-----------------------~~~~~~~~~L~~a 393 (480)
T 3dmy_A 338 IGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERD-P-----------------------QCRSQQIATLEDA 393 (480)
T ss_dssp CSTTSCSCHHHHHHHHHHHHHHTSCTTSCCEEEEEEESCTTS-T-----------------------TCHHHHHHHHHHT
T ss_pred cCCCCCCChHHHHHHHHHHHHHhccCCCCeEEEEEecCcccc-h-----------------------hhHHHHHHHHHhC
Confidence 1111 11 222333434332 3 799 34444443211 0 1112235678999
Q ss_pred CCeecCCHHHHHHHHHHHH
Q 019500 315 GVTVVESPAKIGAAMLEVF 333 (340)
Q Consensus 315 Gvv~v~~~~el~~~~~~~~ 333 (340)
|+...+++++-..++..+.
T Consensus 394 GIp~f~spe~Av~a~~~l~ 412 (480)
T 3dmy_A 394 GIAVVSSLPEATLLAAALI 412 (480)
T ss_dssp TCEECSSHHHHHHHHHHHT
T ss_pred CCcccCCHHHHHHHHHHHH
Confidence 9999999999888887655
No 88
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=97.69 E-value=0.00011 Score=71.21 Aligned_cols=111 Identities=14% Similarity=0.109 Sum_probs=76.1
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCce-----ecCcccccCHHHhhcc-CCCcEEEEecChhhHHHH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE-----HLGLPVFNTVAEAKAE-TKANASAIYVPPPFAAAA 115 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~-----i~G~p~y~sl~dip~~-~~vDlavi~vp~~~v~~~ 115 (340)
..+|.|+|. |.||..++++|.+.|+++. ..|++. +. -.|+..+.+++|+.+. ..+|++++++|+..+.++
T Consensus 22 ~mkIgiIGl-G~mG~~~A~~L~~~G~~V~-v~dr~~--~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~~v~~v 97 (358)
T 4e21_A 22 SMQIGMIGL-GRMGADMVRRLRKGGHECV-VYDLNV--NAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAAVVDSM 97 (358)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCH--HHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGGGHHHH
T ss_pred CCEEEEECc-hHHHHHHHHHHHhCCCEEE-EEeCCH--HHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHHHHHHH
Confidence 457788898 9999999999999999855 667654 21 2477788899998753 235999999999988888
Q ss_pred HHHHHHcC-CcEEEEecCCCChhhHHHHHHHHhccCCcEEEcc
Q 019500 116 ILEAMEAE-LDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGP 157 (340)
Q Consensus 116 v~ea~~~G-vk~vvi~t~Gf~e~~~~~l~~~aar~~girviGP 157 (340)
+++....- -..+|+-.+.....+..++.+.+ ++.|+.+++.
T Consensus 98 l~~l~~~l~~g~iiId~st~~~~~~~~~~~~l-~~~g~~~vda 139 (358)
T 4e21_A 98 LQRMTPLLAANDIVIDGGNSHYQDDIRRADQM-RAQGITYVDV 139 (358)
T ss_dssp HHHHGGGCCTTCEEEECSSCCHHHHHHHHHHH-HTTTCEEEEE
T ss_pred HHHHHhhCCCCCEEEeCCCCChHHHHHHHHHH-HHCCCEEEeC
Confidence 87665432 22334334434444444555554 5678877643
No 89
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=97.68 E-value=7.1e-05 Score=70.69 Aligned_cols=115 Identities=12% Similarity=0.090 Sum_probs=76.5
Q ss_pred cCcCCeEEEEeCCCCCcchHHHHHHHHcCC-eEEEeeCCC--CCCc---eecCcccccCHHHhhccCCCcEEEEecChhh
Q 019500 38 FVDKNTRVICQGITGKNGTFHTEQAIEYGT-KMVGGVTPK--KGGT---EHLGLPVFNTVAEAKAETKANASAIYVPPPF 111 (340)
Q Consensus 38 f~p~~iaViVvGasgk~G~~v~~~l~~~G~-~vv~~VnP~--~~g~---~i~G~p~y~sl~dip~~~~vDlavi~vp~~~ 111 (340)
+.++..+|.|+|+ |.||..++++|.+.|+ ++. ..|++ .... .-.|+..+.+++++.+ +.|++++++|+..
T Consensus 20 ~~~~~~~I~iIG~-G~mG~~~A~~L~~~G~~~V~-~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~--~aDvVi~~vp~~~ 95 (312)
T 3qsg_A 20 FQSNAMKLGFIGF-GEAASAIASGLRQAGAIDMA-AYDAASAESWRPRAEELGVSCKASVAEVAG--ECDVIFSLVTAQA 95 (312)
T ss_dssp -----CEEEEECC-SHHHHHHHHHHHHHSCCEEE-EECSSCHHHHHHHHHHTTCEECSCHHHHHH--HCSEEEECSCTTT
T ss_pred ccCCCCEEEEECc-cHHHHHHHHHHHHCCCCeEE-EEcCCCCHHHHHHHHHCCCEEeCCHHHHHh--cCCEEEEecCchh
Confidence 4455678888899 9999999999999999 644 67764 1001 1247888889999876 4899999999999
Q ss_pred HHHHHHHHHHcC-CcEEEEecCCCChhhHHHHHHHHhccC--CcEEEcc
Q 019500 112 AAAAILEAMEAE-LDLVVCITEGIPQHDMVRVKAALNNQS--KTRLVGP 157 (340)
Q Consensus 112 v~~~v~ea~~~G-vk~vvi~t~Gf~e~~~~~l~~~aar~~--girviGP 157 (340)
..+++++..+.- -..+++-.+.......+++.+.+ ++. |++++.+
T Consensus 96 ~~~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~-~~~~~g~~~vd~ 143 (312)
T 3qsg_A 96 ALEVAQQAGPHLCEGALYADFTSCSPAVKRAIGDVI-SRHRPSAQYAAV 143 (312)
T ss_dssp HHHHHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHH-HHHCTTCEEEEE
T ss_pred HHHHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHH-HhhcCCCeEEec
Confidence 988887766542 23345445555555555555544 334 6776643
No 90
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=97.67 E-value=0.00021 Score=66.83 Aligned_cols=108 Identities=18% Similarity=0.183 Sum_probs=74.0
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ce--ecCcccccCHHHhhccCCCcEEEEecCh-hhHHHHHHH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPVFNTVAEAKAETKANASAIYVPP-PFAAAAILE 118 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~--i~G~p~y~sl~dip~~~~vDlavi~vp~-~~v~~~v~e 118 (340)
.+|.|+|+ |.||..++++|.+.|++++ .+|++... +. -.|+..+.+++++.+ .|++++++|. ..+.+++++
T Consensus 16 ~~I~vIG~-G~mG~~~A~~l~~~G~~V~-~~dr~~~~~~~~~~~g~~~~~~~~~~~~---aDvvi~~vp~~~~~~~v~~~ 90 (296)
T 3qha_A 16 LKLGYIGL-GNMGAPMATRMTEWPGGVT-VYDIRIEAMTPLAEAGATLADSVADVAA---ADLIHITVLDDAQVREVVGE 90 (296)
T ss_dssp CCEEEECC-STTHHHHHHHHTTSTTCEE-EECSSTTTSHHHHHTTCEECSSHHHHTT---SSEEEECCSSHHHHHHHHHH
T ss_pred CeEEEECc-CHHHHHHHHHHHHCCCeEE-EEeCCHHHHHHHHHCCCEEcCCHHHHHh---CCEEEEECCChHHHHHHHHH
Confidence 35677798 9999999999999999854 55554411 11 247888889999875 8999999995 566777766
Q ss_pred HHHcC-CcEEEEecCCCChhhHHHHHHHHhccCCcEEEc
Q 019500 119 AMEAE-LDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (340)
Q Consensus 119 a~~~G-vk~vvi~t~Gf~e~~~~~l~~~aar~~girviG 156 (340)
..+.- -..+++-++.......+++.+.+ ++.|+.++.
T Consensus 91 l~~~l~~g~ivv~~st~~~~~~~~~~~~~-~~~g~~~~~ 128 (296)
T 3qha_A 91 LAGHAKPGTVIAIHSTISDTTAVELARDL-KARDIHIVD 128 (296)
T ss_dssp HHTTCCTTCEEEECSCCCHHHHHHHHHHH-GGGTCEEEE
T ss_pred HHHhcCCCCEEEEeCCCCHHHHHHHHHHH-HHcCCEEEe
Confidence 65432 23345455555555555666655 566777764
No 91
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=97.61 E-value=0.00033 Score=68.80 Aligned_cols=124 Identities=22% Similarity=0.303 Sum_probs=93.6
Q ss_pred CCCcEEEEecChHHHHHHHHHHHhCCCCceEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEccCC-CcHHHHHHHH
Q 019500 179 KPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEIGG-TAEEDAAALI 257 (340)
Q Consensus 179 ~~G~valvSQSG~l~~~~~~~~~~~giG~S~~vs~Gn~a~~dv~~~d~l~~l~~Dp~T~~I~ly~E~~g-~~~~~~~~f~ 257 (340)
..|+|++++-||+++...+|.+...|.....++-+|+.+ ..-.+.+.++.+.+||++++|++.+=+.- +...-++...
T Consensus 246 l~g~I~ii~Ng~Gl~~~t~D~i~~~G~~~aN~lD~gG~a-~~e~~~~al~~~l~d~~v~~ilv~i~ggi~~~~~vA~~i~ 324 (397)
T 3ufx_B 246 LDGNIGIIGNGAGLVMYTLDLVNRVGGKPANFLDIGGGA-KADVVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVI 324 (397)
T ss_dssp CSSSEEEEESSHHHHHHHHHHHHHTTCCBSEEEECCSCC-CHHHHHHHHHHHHTCTTCCEEEEEEEEEEEESHHHHHHHH
T ss_pred CCCcEEEEecCccHHHHHHHHHHHcCCCcCCcEecCCCC-CHHHHHHHHHHHHcCCCCCEEEEECCCCCCCHHHHHHHHH
Confidence 469999999999999999999999999999999999986 34568888899999999999998544321 1123345566
Q ss_pred HHhC---CCCCEEEEEeCCCCCCCCcccccCcccccccccceecCCCCcHHHHHHHHHHcCCeecCCHHHHHHHHHHH
Q 019500 258 KESG---TEKPIVAFIAGLTAPPGRRMGHAGVDVYTIFGSAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGAAMLEV 332 (340)
Q Consensus 258 ~a~r---~~KPVvvlk~Grs~~~g~~~sHtg~~~~~~~~~ala~~~~g~~~~~~a~~~qaGvv~v~~~~el~~~~~~~ 332 (340)
++++ .+||||+--.|. . .+.-...|++.|+...+|+++-..++.++
T Consensus 325 ~a~~~~~~~kPvvv~~~G~-~----------------------------~~~~~~~l~~~gip~~~~~e~Aa~~~~~l 373 (397)
T 3ufx_B 325 RALEEGLLTKPVVMRVAGT-A----------------------------EEEAKKLLEGKPVYMYPTSIEAAKVTVAM 373 (397)
T ss_dssp HHHTTTCCCSCEEEEEEEE-C----------------------------HHHHHHHTTTSSEEECSSHHHHHHHHHHS
T ss_pred HHHHhhCCCCcEEEEccCC-C----------------------------HHHHHHHHHhCCCcccCCHHHHHHHHHHH
Confidence 6665 379999988773 1 12234567788888888888776666543
No 92
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=97.61 E-value=0.00044 Score=64.99 Aligned_cols=110 Identities=19% Similarity=0.181 Sum_probs=72.3
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeC--CCCCCce--ecCcccccCHHHhhccCCCcEEEEecChhhHHHH-H-H
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVT--PKKGGTE--HLGLPVFNTVAEAKAETKANASAIYVPPPFAAAA-I-L 117 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~Vn--P~~~g~~--i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~-v-~ 117 (340)
||.++|. |+||...+++|.+.||+++ ..| |... +. -.|.....|+.|+.+ ..|++++++|+....+. + .
T Consensus 7 kIgfIGL-G~MG~~mA~~L~~~G~~V~-v~dr~~~~~-~~l~~~G~~~~~s~~e~~~--~~dvvi~~l~~~~~~~~v~~~ 81 (297)
T 4gbj_A 7 KIAFLGL-GNLGTPIAEILLEAGYELV-VWNRTASKA-EPLTKLGATVVENAIDAIT--PGGIVFSVLADDAAVEELFSM 81 (297)
T ss_dssp EEEEECC-STTHHHHHHHHHHTTCEEE-EC--------CTTTTTTCEECSSGGGGCC--TTCEEEECCSSHHHHHHHSCH
T ss_pred cEEEEec-HHHHHHHHHHHHHCCCeEE-EEeCCHHHH-HHHHHcCCeEeCCHHHHHh--cCCceeeeccchhhHHHHHHH
Confidence 5677799 9999999999999999954 444 4331 11 247788899999987 58999999998665432 2 2
Q ss_pred HHHH-cCCcEEEEecCCCChhhHHHHHHHHhccCCcEEE-ccCC
Q 019500 118 EAME-AELDLVVCITEGIPQHDMVRVKAALNNQSKTRLV-GPNC 159 (340)
Q Consensus 118 ea~~-~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girvi-GPNc 159 (340)
+... ..-..++|-.+-.+.+..+++.+.+ ++.|++++ .|-+
T Consensus 82 ~~~~~~~~~~iiid~sT~~p~~~~~~~~~~-~~~g~~~ldapVs 124 (297)
T 4gbj_A 82 ELVEKLGKDGVHVSMSTISPETSRQLAQVH-EWYGAHYVGAPIF 124 (297)
T ss_dssp HHHHHHCTTCEEEECSCCCHHHHHHHHHHH-HHTTCEEEECCEE
T ss_pred HHHhhcCCCeEEEECCCCChHHHHHHHHHH-HhcCCceecCCcC
Confidence 2222 2333345555555566666676666 67888877 4443
No 93
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=97.60 E-value=0.00014 Score=68.48 Aligned_cols=107 Identities=14% Similarity=0.124 Sum_probs=72.5
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCce-----ecCcccccCHHHhhccCCCcEEEEecChhh-HHHHH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE-----HLGLPVFNTVAEAKAETKANASAIYVPPPF-AAAAI 116 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~-----i~G~p~y~sl~dip~~~~vDlavi~vp~~~-v~~~v 116 (340)
.+|.|+|. |+||..++++|.+.|++++ ..|++. +. -.|...+.+++++.+ +.|++++++|... +.+++
T Consensus 10 ~~IgiIG~-G~mG~~~A~~l~~~G~~V~-~~dr~~--~~~~~~~~~g~~~~~~~~e~~~--~aDvVi~~vp~~~~~~~v~ 83 (306)
T 3l6d_A 10 FDVSVIGL-GAMGTIMAQVLLKQGKRVA-IWNRSP--GKAAALVAAGAHLCESVKAALS--ASPATIFVLLDNHATHEVL 83 (306)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCCEE-EECSSH--HHHHHHHHHTCEECSSHHHHHH--HSSEEEECCSSHHHHHHHH
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCCEEE-EEeCCH--HHHHHHHHCCCeecCCHHHHHh--cCCEEEEEeCCHHHHHHHh
Confidence 34666799 9999999999999999855 567654 21 137778889999886 4899999999764 66655
Q ss_pred H--HHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEc
Q 019500 117 L--EAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (340)
Q Consensus 117 ~--ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviG 156 (340)
. ......-..+++-++..+....+++.+.+ ++.|++++.
T Consensus 84 ~~~~l~~~~~g~ivid~st~~~~~~~~l~~~~-~~~g~~~vd 124 (306)
T 3l6d_A 84 GMPGVARALAHRTIVDYTTNAQDEGLALQGLV-NQAGGHYVK 124 (306)
T ss_dssp TSTTHHHHTTTCEEEECCCCCTTHHHHHHHHH-HHTTCEEEE
T ss_pred cccchhhccCCCEEEECCCCCHHHHHHHHHHH-HHcCCeEEe
Confidence 4 22222223344445555555556666555 567777764
No 94
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=97.60 E-value=0.00018 Score=66.94 Aligned_cols=107 Identities=12% Similarity=0.144 Sum_probs=71.8
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCce-----ecCcccccCHHHhhccCCCcEEEEecCh-hhHHHH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE-----HLGLPVFNTVAEAKAETKANASAIYVPP-PFAAAA 115 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~-----i~G~p~y~sl~dip~~~~vDlavi~vp~-~~v~~~ 115 (340)
+.+|.|+|+ |+||..++++|.+.|++++ .+|++. +. -.|+..+.+++++.+ +.|++++++|. ..+.++
T Consensus 3 m~~I~iiG~-G~mG~~~a~~l~~~G~~V~-~~d~~~--~~~~~~~~~g~~~~~~~~~~~~--~aDvvi~~vp~~~~~~~v 76 (302)
T 2h78_A 3 MKQIAFIGL-GHMGAPMATNLLKAGYLLN-VFDLVQ--SAVDGLVAAGASAARSARDAVQ--GADVVISMLPASQHVEGL 76 (302)
T ss_dssp CCEEEEECC-STTHHHHHHHHHHTTCEEE-EECSSH--HHHHHHHHTTCEECSSHHHHHT--TCSEEEECCSCHHHHHHH
T ss_pred CCEEEEEee-cHHHHHHHHHHHhCCCeEE-EEcCCH--HHHHHHHHCCCeEcCCHHHHHh--CCCeEEEECCCHHHHHHH
Confidence 456778899 9999999999999999855 667654 21 137888899999876 58999999985 455555
Q ss_pred HH---HHHHc-CCcEEEEecCCCChhhHHHHHHHHhccCCcEEE
Q 019500 116 IL---EAMEA-ELDLVVCITEGIPQHDMVRVKAALNNQSKTRLV 155 (340)
Q Consensus 116 v~---ea~~~-Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girvi 155 (340)
+. +..+. .-..+++-++.......+++.+.+ ++.|++++
T Consensus 77 ~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~-~~~g~~~~ 119 (302)
T 2h78_A 77 YLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAA-RERGLAML 119 (302)
T ss_dssp HHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHH-HHTTCCEE
T ss_pred HcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHH-HHcCCEEE
Confidence 55 33322 223344444555545455565555 45576655
No 95
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.59 E-value=6.1e-05 Score=72.59 Aligned_cols=112 Identities=14% Similarity=0.220 Sum_probs=70.9
Q ss_pred cccCcCCeEEEEeCCCCCcchHHHHHHHHcCCe-EEEeeCCCCCC------cee-cCcccccCHHHhhccCCCcEEEEec
Q 019500 36 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTK-MVGGVTPKKGG------TEH-LGLPVFNTVAEAKAETKANASAIYV 107 (340)
Q Consensus 36 ~lf~p~~iaViVvGasgk~G~~v~~~l~~~G~~-vv~~VnP~~~g------~~i-~G~p~y~sl~dip~~~~vDlavi~v 107 (340)
..+.-+++||+|+|+ |.+|+.+++.|.+ .++ .++.++++... ..+ ..+.-..++.++.. +.|++|.++
T Consensus 10 ~~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~--~~DvVi~~~ 85 (365)
T 3abi_A 10 HHIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMK--EFELVIGAL 85 (365)
T ss_dssp ------CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred ccccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHh--CCCEEEEec
Confidence 445667889999999 9999999998865 455 33344442100 111 11111234666655 589999999
Q ss_pred ChhhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEE
Q 019500 108 PPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLV 155 (340)
Q Consensus 108 p~~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girvi 155 (340)
|+.....+++.|++.|++. +-+ ++.. ++..++.+.+ +++|+.++
T Consensus 86 p~~~~~~v~~~~~~~g~~y-vD~-s~~~-~~~~~l~~~a-~~~g~~~i 129 (365)
T 3abi_A 86 PGFLGFKSIKAAIKSKVDM-VDV-SFMP-ENPLELRDEA-EKAQVTIV 129 (365)
T ss_dssp CGGGHHHHHHHHHHHTCEE-EEC-CCCS-SCGGGGHHHH-HHTTCEEE
T ss_pred CCcccchHHHHHHhcCcce-Eee-eccc-hhhhhhhhhh-ccCCceee
Confidence 9999999999999999987 333 3333 3344455554 67888877
No 96
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=97.57 E-value=0.00037 Score=64.25 Aligned_cols=107 Identities=15% Similarity=0.119 Sum_probs=68.8
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeC-CCCCCcee--cCcccccCHHHhhccCCCcEEEEecChhh-HHHHHH-
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVT-PKKGGTEH--LGLPVFNTVAEAKAETKANASAIYVPPPF-AAAAIL- 117 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~Vn-P~~~g~~i--~G~p~y~sl~dip~~~~vDlavi~vp~~~-v~~~v~- 117 (340)
.+|.|+|+ |++|+.+++.|.+.|++++ .+| |... +.+ .|+..+.+++++.+ +.|++++++|... +.+++.
T Consensus 4 m~i~iiG~-G~~G~~~a~~l~~~g~~V~-~~~~~~~~-~~~~~~g~~~~~~~~~~~~--~~D~vi~~vp~~~~~~~v~~~ 78 (295)
T 1yb4_A 4 MKLGFIGL-GIMGSPMAINLARAGHQLH-VTTIGPVA-DELLSLGAVNVETARQVTE--FADIIFIMVPDTPQVEDVLFG 78 (295)
T ss_dssp CEEEECCC-STTHHHHHHHHHHTTCEEE-ECCSSCCC-HHHHTTTCBCCSSHHHHHH--TCSEEEECCSSHHHHHHHHHS
T ss_pred CEEEEEcc-CHHHHHHHHHHHhCCCEEE-EEcCHHHH-HHHHHcCCcccCCHHHHHh--cCCEEEEECCCHHHHHHHHhC
Confidence 46888898 9999999999999999854 455 3221 111 37778889998776 5899999998876 455554
Q ss_pred --HHHHc-CCcEE-EEecCCCChhhHHHHHHHHhccCCcEEEc
Q 019500 118 --EAMEA-ELDLV-VCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (340)
Q Consensus 118 --ea~~~-Gvk~v-vi~t~Gf~e~~~~~l~~~aar~~girviG 156 (340)
+..+. .-..+ +..+++ .....+++.+.+ ++.++++++
T Consensus 79 ~~~l~~~l~~~~~vv~~s~~-~~~~~~~l~~~~-~~~g~~~~~ 119 (295)
T 1yb4_A 79 EHGCAKTSLQGKTIVDMSSI-SPIETKRFAQRV-NEMGADYLD 119 (295)
T ss_dssp TTSSTTSCCTTEEEEECSCC-CHHHHHHHHHHH-HTTTEEEEE
T ss_pred chhHhhcCCCCCEEEECCCC-CHHHHHHHHHHH-HHcCCeEEE
Confidence 22211 12233 334445 333445565555 456787773
No 97
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=97.56 E-value=0.00016 Score=65.62 Aligned_cols=87 Identities=15% Similarity=0.196 Sum_probs=67.0
Q ss_pred EEEEeCCCCCcchHHHHHHHHcC----CeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChhhHHHHHHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYG----TKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEA 119 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G----~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ea 119 (340)
+|.|+|+ |+||+.+.+.|.+.| +++. .+|++. +. .|+.++.+..+..+ +.|++++++|+..+.+++++.
T Consensus 6 ~i~iiG~-G~mG~~~a~~l~~~g~~~~~~v~-~~~~~~--~~-~g~~~~~~~~~~~~--~~D~vi~~v~~~~~~~v~~~l 78 (262)
T 2rcy_A 6 KLGFMGL-GQMGSALAHGIANANIIKKENLF-YYGPSK--KN-TTLNYMSSNEELAR--HCDIIVCAVKPDIAGSVLNNI 78 (262)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTSSCGGGEE-EECSSC--CS-SSSEECSCHHHHHH--HCSEEEECSCTTTHHHHHHHS
T ss_pred EEEEECc-CHHHHHHHHHHHHCCCCCCCeEE-EEeCCc--cc-CceEEeCCHHHHHh--cCCEEEEEeCHHHHHHHHHHH
Confidence 5777799 999999999999888 4544 677665 23 68888888888765 489999999999999888876
Q ss_pred HHc-CCcEEEEecCCCChh
Q 019500 120 MEA-ELDLVVCITEGIPQH 137 (340)
Q Consensus 120 ~~~-Gvk~vvi~t~Gf~e~ 137 (340)
... .-+.++..++|++.+
T Consensus 79 ~~~l~~~~vv~~~~gi~~~ 97 (262)
T 2rcy_A 79 KPYLSSKLLISICGGLNIG 97 (262)
T ss_dssp GGGCTTCEEEECCSSCCHH
T ss_pred HHhcCCCEEEEECCCCCHH
Confidence 543 223567778898764
No 98
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=97.54 E-value=0.00014 Score=66.46 Aligned_cols=93 Identities=17% Similarity=0.162 Sum_probs=67.8
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ce---ecCcccccCHHHhhccCCCcEEEEecChhhHHHHHHH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE---HLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILE 118 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~---i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e 118 (340)
++|.|+|+ |++|+.+++.+.+.|++++..++++... +. -.|+.++.+++++.+ +.|++++++|+..+.+++++
T Consensus 11 m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~Dvvi~av~~~~~~~v~~~ 87 (266)
T 3d1l_A 11 TPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNP--YAKLYIVSLKDSAFAELLQG 87 (266)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCS--CCSEEEECCCHHHHHHHHHH
T ss_pred CeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhc--CCCEEEEecCHHHHHHHHHH
Confidence 35777799 9999999999998899856577765410 11 137778888888765 59999999999998888877
Q ss_pred HHHcC--CcEEEEecCCCChhh
Q 019500 119 AMEAE--LDLVVCITEGIPQHD 138 (340)
Q Consensus 119 a~~~G--vk~vvi~t~Gf~e~~ 138 (340)
+.+.- =+.++..++|++.+.
T Consensus 88 l~~~~~~~~ivv~~s~~~~~~~ 109 (266)
T 3d1l_A 88 IVEGKREEALMVHTAGSIPMNV 109 (266)
T ss_dssp HHTTCCTTCEEEECCTTSCGGG
T ss_pred HHhhcCCCcEEEECCCCCchHH
Confidence 65421 134556677887544
No 99
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=97.51 E-value=0.0002 Score=66.35 Aligned_cols=108 Identities=14% Similarity=0.080 Sum_probs=71.7
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ce--ecCcccccCHHHhhccCCCcEEEEecChh-hHHHHH---
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPVFNTVAEAKAETKANASAIYVPPP-FAAAAI--- 116 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~--i~G~p~y~sl~dip~~~~vDlavi~vp~~-~v~~~v--- 116 (340)
+|.|+|+ |+||..+.++|.+.|+++. ..|++... +. -.|.....+++++.+ +.|++++++|.. .+.+++
T Consensus 3 ~I~iiG~-G~mG~~~a~~l~~~G~~V~-~~dr~~~~~~~~~~~g~~~~~~~~~~~~--~advvi~~v~~~~~~~~v~~~~ 78 (287)
T 3pdu_A 3 TYGFLGL-GIMGGPMAANLVRAGFDVT-VWNRNPAKCAPLVALGARQASSPAEVCA--ACDITIAMLADPAAAREVCFGA 78 (287)
T ss_dssp CEEEECC-STTHHHHHHHHHHHTCCEE-EECSSGGGGHHHHHHTCEECSCHHHHHH--HCSEEEECCSSHHHHHHHHHST
T ss_pred eEEEEcc-CHHHHHHHHHHHHCCCeEE-EEcCCHHHHHHHHHCCCeecCCHHHHHH--cCCEEEEEcCCHHHHHHHHcCc
Confidence 4667798 9999999999999999855 56665410 11 147788889999876 489999999986 566665
Q ss_pred HHHHHc-CCcEEEEecCCCChhhHHHHHHHHhccCCcEEEc
Q 019500 117 LEAMEA-ELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (340)
Q Consensus 117 ~ea~~~-Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviG 156 (340)
++..+. .-..+++-++.......+++.+.+ ++.|+.++.
T Consensus 79 ~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~-~~~g~~~~~ 118 (287)
T 3pdu_A 79 NGVLEGIGGGRGYIDMSTVDDETSTAIGAAV-TARGGRFLE 118 (287)
T ss_dssp TCGGGTCCTTCEEEECSCCCHHHHHHHHHHH-HHTTCEEEE
T ss_pred hhhhhcccCCCEEEECCCCCHHHHHHHHHHH-HHcCCEEEE
Confidence 333332 122344445555555555565555 456777664
No 100
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=97.51 E-value=0.00034 Score=64.78 Aligned_cols=108 Identities=12% Similarity=0.189 Sum_probs=70.6
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ce--ecCcccccCHHHhhccCCCcEEEEecC-hhhHHHHH--
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPVFNTVAEAKAETKANASAIYVP-PPFAAAAI-- 116 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~--i~G~p~y~sl~dip~~~~vDlavi~vp-~~~v~~~v-- 116 (340)
++|.|+|+ |.+|..+++.|.+.|+++. .+|++... +. -.|+..+.+++++.+ +.|++++++| +..+.+++
T Consensus 6 m~i~iiG~-G~~G~~~a~~l~~~g~~V~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~D~vi~~v~~~~~~~~~~~~ 81 (299)
T 1vpd_A 6 MKVGFIGL-GIMGKPMSKNLLKAGYSLV-VSDRNPEAIADVIAAGAETASTAKAIAE--QCDVIITMLPNSPHVKEVALG 81 (299)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEE-EECSCHHHHHHHHHTTCEECSSHHHHHH--HCSEEEECCSSHHHHHHHHHS
T ss_pred ceEEEECc-hHHHHHHHHHHHhCCCEEE-EEeCCHHHHHHHHHCCCeecCCHHHHHh--CCCEEEEECCCHHHHHHHHhC
Confidence 46788898 9999999999999999854 66765310 11 137788889988765 4899999999 55566666
Q ss_pred -HHHH---HcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEcc
Q 019500 117 -LEAM---EAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGP 157 (340)
Q Consensus 117 -~ea~---~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGP 157 (340)
++.. +.|. .++..++|.+ ...+++.+.+ .+.|+.++..
T Consensus 82 ~~~l~~~l~~~~-~vv~~s~~~~-~~~~~l~~~~-~~~g~~~~~~ 123 (299)
T 1vpd_A 82 ENGIIEGAKPGT-VLIDMSSIAP-LASREISDAL-KAKGVEMLDA 123 (299)
T ss_dssp TTCHHHHCCTTC-EEEECSCCCH-HHHHHHHHHH-HTTTCEEEEC
T ss_pred cchHhhcCCCCC-EEEECCCCCH-HHHHHHHHHH-HHcCCeEEEe
Confidence 3332 2332 3444555553 3344555554 4557776653
No 101
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=97.50 E-value=0.00026 Score=65.48 Aligned_cols=109 Identities=15% Similarity=0.099 Sum_probs=70.9
Q ss_pred eEEEEeCCCCCcchHHHHHHHHc--CCeEEEeeCCCCCC-cee--cCc--ccccCHHHhhccCCCcEEEEecChhhHHHH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEY--GTKMVGGVTPKKGG-TEH--LGL--PVFNTVAEAKAETKANASAIYVPPPFAAAA 115 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~--G~~vv~~VnP~~~g-~~i--~G~--p~y~sl~dip~~~~vDlavi~vp~~~v~~~ 115 (340)
.+|.|+|+ |+||..+++.|.+. |++++ .+|++... +.. .|. ..+.+++++.+ +.|++++++|+..+.++
T Consensus 7 ~~I~iIG~-G~mG~~~a~~l~~~g~~~~V~-~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~--~aDvVilavp~~~~~~v 82 (290)
T 3b1f_A 7 KTIYIAGL-GLIGASLALGIKRDHPHYKIV-GYNRSDRSRDIALERGIVDEATADFKVFAA--LADVIILAVPIKKTIDF 82 (290)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCTTSEEE-EECSSHHHHHHHHHTTSCSEEESCTTTTGG--GCSEEEECSCHHHHHHH
T ss_pred ceEEEEee-CHHHHHHHHHHHhCCCCcEEE-EEcCCHHHHHHHHHcCCcccccCCHHHhhc--CCCEEEEcCCHHHHHHH
Confidence 46778898 99999999999887 56644 67765310 111 344 34567776655 48999999999999999
Q ss_pred HHHHHHc--CCcEEEEecCCCChhhHHHHHHHHhccCCcEEEc
Q 019500 116 ILEAMEA--ELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (340)
Q Consensus 116 v~ea~~~--Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviG 156 (340)
+++.... .-+.+++..++......+.+.+.. .+.++++++
T Consensus 83 ~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l-~~~~~~~v~ 124 (290)
T 3b1f_A 83 IKILADLDLKEDVIITDAGSTKYEIVRAAEYYL-KDKPVQFVG 124 (290)
T ss_dssp HHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHH-TTSSCEEEE
T ss_pred HHHHHhcCCCCCCEEEECCCCchHHHHHHHHhc-cccCCEEEE
Confidence 8887554 233445444454433334555554 334778875
No 102
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=97.48 E-value=0.00013 Score=66.38 Aligned_cols=91 Identities=11% Similarity=0.119 Sum_probs=66.2
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ce---ecCcccccCHHHhhccCCCcEEEEecChhhHHHHHH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE---HLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAIL 117 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~---i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ 117 (340)
+++|.|+|+ |++|+.+++.|.+.|+++ ..+|++... +. -.|+..+.+++++.+ ++|++++++|+..+.++++
T Consensus 3 ~m~i~iiG~-G~mG~~~a~~l~~~g~~v-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~D~Vi~~v~~~~~~~v~~ 78 (259)
T 2ahr_A 3 AMKIGIIGV-GKMASAIIKGLKQTPHEL-IISGSSLERSKEIAEQLALPYAMSHQDLID--QVDLVILGIKPQLFETVLK 78 (259)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTTSSCEE-EEECSSHHHHHHHHHHHTCCBCSSHHHHHH--TCSEEEECSCGGGHHHHHT
T ss_pred ccEEEEECC-CHHHHHHHHHHHhCCCeE-EEECCCHHHHHHHHHHcCCEeeCCHHHHHh--cCCEEEEEeCcHhHHHHHH
Confidence 357888898 999999999999888764 467765410 11 237888899988876 5999999999998888887
Q ss_pred HHHHcCCcEEEEecCCCChhh
Q 019500 118 EAMEAELDLVVCITEGIPQHD 138 (340)
Q Consensus 118 ea~~~Gvk~vvi~t~Gf~e~~ 138 (340)
++. .|. .++-.+.|++.+.
T Consensus 79 ~l~-~~~-~vv~~~~~~~~~~ 97 (259)
T 2ahr_A 79 PLH-FKQ-PIISMAAGISLQR 97 (259)
T ss_dssp TSC-CCS-CEEECCTTCCHHH
T ss_pred Hhc-cCC-EEEEeCCCCCHHH
Confidence 643 443 4444556887544
No 103
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=97.48 E-value=0.00052 Score=65.02 Aligned_cols=98 Identities=13% Similarity=0.099 Sum_probs=68.1
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCC--eEEEeeCCCCCCce-----ecCc--ccccCHHH-hhccCCCcEEEEecChhh
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGT--KMVGGVTPKKGGTE-----HLGL--PVFNTVAE-AKAETKANASAIYVPPPF 111 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~--~vv~~VnP~~~g~~-----i~G~--p~y~sl~d-ip~~~~vDlavi~vp~~~ 111 (340)
..+|.|+|+ |.||..+++.|.+.|+ +++ .+|++. +. -.|+ ..+.++++ +.. +.|++++++|+..
T Consensus 33 ~~kI~IIG~-G~mG~slA~~l~~~G~~~~V~-~~dr~~--~~~~~a~~~G~~~~~~~~~~~~~~~--~aDvVilavp~~~ 106 (314)
T 3ggo_A 33 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIY-GYDINP--ESISKAVDLGIIDEGTTSIAKVEDF--SPDFVMLSSPVRT 106 (314)
T ss_dssp CSEEEEESC-SHHHHHHHHHHHHTTCCSEEE-EECSCH--HHHHHHHHTTSCSEEESCTTGGGGG--CCSEEEECSCGGG
T ss_pred CCEEEEEee-CHHHHHHHHHHHhCCCCCEEE-EEECCH--HHHHHHHHCCCcchhcCCHHHHhhc--cCCEEEEeCCHHH
Confidence 356888898 9999999999999998 644 777764 22 1344 45677887 555 5899999999999
Q ss_pred HHHHHHHHHHc-CCcEEEEecCCCChhhHHHHHHH
Q 019500 112 AAAAILEAMEA-ELDLVVCITEGIPQHDMVRVKAA 145 (340)
Q Consensus 112 v~~~v~ea~~~-Gvk~vvi~t~Gf~e~~~~~l~~~ 145 (340)
..+++++.... .-..+|+-.++......+++.+.
T Consensus 107 ~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~ 141 (314)
T 3ggo_A 107 FREIAKKLSYILSEDATVTDQGSVKGKLVYDLENI 141 (314)
T ss_dssp HHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHH
T ss_pred HHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHh
Confidence 99999888764 33444443444443334445444
No 104
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=97.45 E-value=0.00026 Score=68.62 Aligned_cols=160 Identities=15% Similarity=0.056 Sum_probs=96.8
Q ss_pred cCCeEEEEeCCCCCcchHHHHHHHHc--C--CeEEEeeCCCCCCcee---c-CcccccCHHHhhccC-------------
Q 019500 40 DKNTRVICQGITGKNGTFHTEQAIEY--G--TKMVGGVTPKKGGTEH---L-GLPVFNTVAEAKAET------------- 98 (340)
Q Consensus 40 p~~iaViVvGasgk~G~~v~~~l~~~--G--~~vv~~VnP~~~g~~i---~-G~p~y~sl~dip~~~------------- 98 (340)
++.++|.|+|+ |.+|+.+++.+.+. | +++++..+.+. ..+ + |++.|.+..++.+..
T Consensus 2 ~k~i~vgIiG~-G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~--~~~~~~~~gi~~~~~~~e~l~~~~~~~~did~v~e~ 78 (358)
T 1ebf_A 2 TKVVNVAVIGA-GVVGSAFLDQLLAMKSTITYNLVLLAEAER--SLISKDFSPLNVGSDWKAALAASTTKTLPLDDLIAH 78 (358)
T ss_dssp CSEEEEEEECC-SHHHHHHHHHHHHCCCSSEEEEEEEECSSB--EEECSSCSCCSCTTCHHHHHHTCCCBCCCHHHHHHH
T ss_pred CceEEEEEEec-CHHHHHHHHHHHhcCCCCCEEEEEEEECCh--hhhccccCCCCccccHHHHHhcccCCCCCHHHHHHH
Confidence 35688999999 99999999998875 2 56777777543 222 1 677777777665421
Q ss_pred -----CCcEEEEecChhhHHHHHHHHHHcCCcEEEEecCC-CC--hhhHHHHHHHHhccCCcEEEccCCCCcccCC--Cc
Q 019500 99 -----KANASAIYVPPPFAAAAILEAMEAELDLVVCITEG-IP--QHDMVRVKAALNNQSKTRLVGPNCPGVIKPG--EC 168 (340)
Q Consensus 99 -----~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~G-f~--e~~~~~l~~~aar~~girviGPNc~Gi~~p~--~~ 168 (340)
.+|++++|+|...+.+...+|+++|.+. +....+ ++ .++..+|. ++ +++|+.+.=.-+.|--.|. .+
T Consensus 79 ~~~~~~~DvVV~~t~~~~~a~~~~~AL~aGkhV-VtaNkkpla~~~~~~~eL~-~A-~~~gv~~~~Ea~vg~giPii~~l 155 (358)
T 1ebf_A 79 LKTSPKPVILVDNTSSAYIAGFYTKFVENGISI-ATPNKKAFSSDLATWKALF-SN-KPTNGFVYHEATVGAGLPIISFL 155 (358)
T ss_dssp HTTCSSCEEEEECSCCHHHHTTHHHHHHTTCEE-ECCCCGGGSSCHHHHHHHT-CC-CTTCCCEECGGGTTTTSSCHHHH
T ss_pred hhhccCCcEEEEcCCChHHHHHHHHHHHCCCeE-EecCcccccCCHHHHHHHH-HH-HHcCCEEEEccccccCCcHHHHH
Confidence 2379999999887777778999999875 311122 33 24456676 54 8888776533333333343 11
Q ss_pred ccccCCCCCCCCCcEEEEec--ChHHHHHHHHHHH---hCCCCceEEe
Q 019500 169 KIGIMPGYIHKPGRIGIVSR--SGTLTYEAVFQTT---AVGLGQSTCV 211 (340)
Q Consensus 169 ~~~~~~~~~~~~G~valvSQ--SG~l~~~~~~~~~---~~giG~S~~v 211 (340)
+-... .-+.|.-|.. ||+.. .++.... +.|..|+.++
T Consensus 156 ~~~l~-----~G~~I~~I~GIlnGT~n-yil~~m~~~~~~g~~f~~~l 197 (358)
T 1ebf_A 156 REIIQ-----TGDEVEKIEGIFSGTLS-YIFNEFSTSQANDVKFSDVV 197 (358)
T ss_dssp HHHHH-----HTCCEEEEEEECCHHHH-HHHHHHSCSSCCCCCHHHHH
T ss_pred HHHHH-----cCCCeEEEEEEEeecce-eeecccccccccCCCHHHHH
Confidence 11110 1124544433 67764 4555443 4566666554
No 105
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=97.43 E-value=0.00045 Score=62.83 Aligned_cols=100 Identities=15% Similarity=0.115 Sum_probs=67.8
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCcee-----cCcccccCHHHhhccCCCcEEEEecChhhHHHHHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH-----LGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILE 118 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i-----~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e 118 (340)
+|.|+|+ |+||..+.++|.+.|++++ ..|+....+.. .|+. .+++++.+ +.|++++++|+....+.+.+
T Consensus 2 ~I~iIG~-G~mG~~la~~l~~~g~~V~-~~~~~~~~~~~~~~~~~g~~--~~~~~~~~--~aDvvi~~v~~~~~~~~~~~ 75 (264)
T 1i36_A 2 RVGFIGF-GEVAQTLASRLRSRGVEVV-TSLEGRSPSTIERARTVGVT--ETSEEDVY--SCPVVISAVTPGVALGAARR 75 (264)
T ss_dssp EEEEESC-SHHHHHHHHHHHHTTCEEE-ECCTTCCHHHHHHHHHHTCE--ECCHHHHH--TSSEEEECSCGGGHHHHHHH
T ss_pred eEEEEec-hHHHHHHHHHHHHCCCeEE-EeCCccCHHHHHHHHHCCCc--CCHHHHHh--cCCEEEEECCCHHHHHHHHH
Confidence 5677798 9999999999999999866 46763210111 3555 67777665 58999999999877777776
Q ss_pred HHHcCCcEEEEecCCCChhhHHHHHHHHhccCC
Q 019500 119 AMEAELDLVVCITEGIPQHDMVRVKAALNNQSK 151 (340)
Q Consensus 119 a~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~g 151 (340)
..+.--+ +++-.++......+++.+.+ .+.|
T Consensus 76 ~~~~~~~-~vi~~s~~~~~~~~~l~~~~-~~~g 106 (264)
T 1i36_A 76 AGRHVRG-IYVDINNISPETVRMASSLI-EKGG 106 (264)
T ss_dssp HHTTCCS-EEEECSCCCHHHHHHHHHHC-SSSE
T ss_pred HHHhcCc-EEEEccCCCHHHHHHHHHHH-hhCC
Confidence 6554334 55555666655556666655 3433
No 106
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=97.40 E-value=0.0006 Score=63.10 Aligned_cols=108 Identities=10% Similarity=0.159 Sum_probs=70.0
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee--cCcccccCHHHhhccCCCcEEEEecChh-hHHHHHH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH--LGLPVFNTVAEAKAETKANASAIYVPPP-FAAAAIL 117 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i--~G~p~y~sl~dip~~~~vDlavi~vp~~-~v~~~v~ 117 (340)
..+|.|+|+ |.+|..+.+.|.+.|+++. .+|++... +.+ .|+..+.+++++.+ +.|++++++|.. .+.+++.
T Consensus 4 ~~~i~iiG~-G~~G~~~a~~l~~~g~~V~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~D~vi~~vp~~~~~~~v~~ 79 (301)
T 3cky_A 4 SIKIGFIGL-GAMGKPMAINLLKEGVTVY-AFDLMEANVAAVVAQGAQACENNQKVAA--ASDIIFTSLPNAGIVETVMN 79 (301)
T ss_dssp CCEEEEECC-CTTHHHHHHHHHHTTCEEE-EECSSHHHHHHHHTTTCEECSSHHHHHH--HCSEEEECCSSHHHHHHHHH
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCeEE-EEeCCHHHHHHHHHCCCeecCCHHHHHh--CCCEEEEECCCHHHHHHHHc
Confidence 356788898 9999999999999999854 66664310 111 37778889988776 489999999754 4556653
Q ss_pred ---HHHH---cCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEc
Q 019500 118 ---EAME---AELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (340)
Q Consensus 118 ---ea~~---~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviG 156 (340)
+..+ .| +.++..++|.+ ...+++.+.+ ++.+++++.
T Consensus 80 ~~~~l~~~l~~~-~~vv~~~~~~~-~~~~~l~~~~-~~~g~~~~~ 121 (301)
T 3cky_A 80 GPGGVLSACKAG-TVIVDMSSVSP-SSTLKMAKVA-AEKGIDYVD 121 (301)
T ss_dssp STTCHHHHSCTT-CEEEECCCCCH-HHHHHHHHHH-HHTTCEEEE
T ss_pred CcchHhhcCCCC-CEEEECCCCCH-HHHHHHHHHH-HHcCCeEEE
Confidence 3322 23 23455566663 2334455544 345777763
No 107
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=97.39 E-value=0.00041 Score=64.96 Aligned_cols=109 Identities=12% Similarity=0.107 Sum_probs=70.4
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ce--ecCcccccCHHHhhccCCCcEEEEecC-hhhHHHHHHH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPVFNTVAEAKAETKANASAIYVP-PPFAAAAILE 118 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~--i~G~p~y~sl~dip~~~~vDlavi~vp-~~~v~~~v~e 118 (340)
.+|.|+|+ |++|..+++.|.+.|+++. .+|++... +. -.|+.++.++.++.+ +.|++++++| +..+.+++.+
T Consensus 31 ~~I~iIG~-G~mG~~~a~~l~~~g~~V~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~DvVi~av~~~~~~~~v~~~ 106 (316)
T 2uyy_A 31 KKIGFLGL-GLMGSGIVSNLLKMGHTVT-VWNRTAEKCDLFIQEGARLGRTPAEVVS--TCDITFACVSDPKAAKDLVLG 106 (316)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCEE-EECSSGGGGHHHHHTTCEECSCHHHHHH--HCSEEEECCSSHHHHHHHHHS
T ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCEEE-EEeCCHHHHHHHHHcCCEEcCCHHHHHh--cCCEEEEeCCCHHHHHHHHcC
Confidence 45777798 9999999999999999854 66665410 11 146777888888765 4899999999 7777777654
Q ss_pred HH---H-cCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEc
Q 019500 119 AM---E-AELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (340)
Q Consensus 119 a~---~-~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviG 156 (340)
.. + ..-..+++-.+.......+++.+.+ .+.+.++++
T Consensus 107 ~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~-~~~~~~~v~ 147 (316)
T 2uyy_A 107 PSGVLQGIRPGKCYVDMSTVDADTVTELAQVI-VSRGGRFLE 147 (316)
T ss_dssp TTCGGGGCCTTCEEEECSCCCHHHHHHHHHHH-HHTTCEEEE
T ss_pred chhHhhcCCCCCEEEECCCCCHHHHHHHHHHH-HHcCCEEEE
Confidence 21 1 1222334434444444455555554 345777774
No 108
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=97.32 E-value=0.00044 Score=66.12 Aligned_cols=88 Identities=17% Similarity=0.171 Sum_probs=65.3
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCC--CCc--eec------------------CcccccCHHHhhccC
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKK--GGT--EHL------------------GLPVFNTVAEAKAET 98 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~--~g~--~i~------------------G~p~y~sl~dip~~~ 98 (340)
+++|.|+|+ |.+|+.+++.+.+. ++++++..++.. .+. +-. ++++|.+.+++..
T Consensus 2 ~irVgIiG~-G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~-- 78 (334)
T 2czc_A 2 KVKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLE-- 78 (334)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHT--
T ss_pred CcEEEEEeE-hHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhcc--
Confidence 368889999 99999999998876 567776555432 100 011 2367788888876
Q ss_pred CCcEEEEecChhhHHHHHHHHHHcCCcEEEEecCCC
Q 019500 99 KANASAIYVPPPFAAAAILEAMEAELDLVVCITEGI 134 (340)
Q Consensus 99 ~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~Gf 134 (340)
++|++++++|...+.+.++.++++|.+ ++ ++...
T Consensus 79 ~vDvV~~aTp~~~h~~~a~~~l~aGk~-Vi-~sap~ 112 (334)
T 2czc_A 79 KVDIIVDATPGGIGAKNKPLYEKAGVK-AI-FQGGE 112 (334)
T ss_dssp TCSEEEECCSTTHHHHHHHHHHHHTCE-EE-ECTTS
T ss_pred CCCEEEECCCccccHHHHHHHHHcCCc-eE-eeccc
Confidence 699999999999999999999999976 34 45444
No 109
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=97.32 E-value=0.00023 Score=71.72 Aligned_cols=124 Identities=11% Similarity=0.136 Sum_probs=80.1
Q ss_pred ccccCc-CCeEEEEeCCCCCcchHHHHHHHHc------CCeEEEeeCCCCCCc---eecCcccc----cCHHHhhccCCC
Q 019500 35 PAVFVD-KNTRVICQGITGKNGTFHTEQAIEY------GTKMVGGVTPKKGGT---EHLGLPVF----NTVAEAKAETKA 100 (340)
Q Consensus 35 ~~lf~p-~~iaViVvGasgk~G~~v~~~l~~~------G~~vv~~VnP~~~g~---~i~G~p~y----~sl~dip~~~~v 100 (340)
...|.. + +|.|+|. |+||..++++|++. |++++...++..... .-.|+... .+++|+.. ..
T Consensus 48 ~~~L~GiK--kIgIIGl-GsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~--~A 122 (525)
T 3fr7_A 48 PEAFKGIK--QIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVS--GS 122 (525)
T ss_dssp HHHTTTCS--EEEEECC-TTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHH--HC
T ss_pred hHHhcCCC--EEEEEeE-hHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHh--cC
Confidence 344544 4 4556698 99999999999998 998664555432101 23576652 67888876 48
Q ss_pred cEEEEecChhhHHHHHHHHHHc-CCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCCCCcc
Q 019500 101 NASAIYVPPPFAAAAILEAMEA-ELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVI 163 (340)
Q Consensus 101 Dlavi~vp~~~v~~~v~ea~~~-Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc~Gi~ 163 (340)
|++++++|+....+++++.... .-..++.++.||+-...++......+...+-.+-||+.|..
T Consensus 123 DVVILaVP~~~~~eVl~eI~p~LK~GaILs~AaGf~I~~le~~~i~~p~dv~VVrVmPNtPg~~ 186 (525)
T 3fr7_A 123 DLVLLLISDAAQADNYEKIFSHMKPNSILGLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGPS 186 (525)
T ss_dssp SEEEECSCHHHHHHHHHHHHHHSCTTCEEEESSSHHHHHHHHTTCCCCTTSEEEEEEESSCHHH
T ss_pred CEEEECCChHHHHHHHHHHHHhcCCCCeEEEeCCCCHHHHhhhcccCCCCCcEEEEecCCCchh
Confidence 9999999999888888775543 23446789999964332210001111223445579998875
No 110
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=97.32 E-value=0.00058 Score=63.06 Aligned_cols=107 Identities=15% Similarity=0.133 Sum_probs=69.7
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ce--ecCcccccCHHHhhccCCCcEEEEecCh-hhHHHHHHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPVFNTVAEAKAETKANASAIYVPP-PFAAAAILEA 119 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~--i~G~p~y~sl~dip~~~~vDlavi~vp~-~~v~~~v~ea 119 (340)
+|.|+|+ |+||..+.+.|.+.|+++. .+|++... +. -.|+.++.+++++.. +.|++++++|. ..+.+++.+.
T Consensus 2 ~i~iiG~-G~mG~~~a~~l~~~g~~V~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~Dvvi~~vp~~~~~~~v~~~~ 77 (296)
T 2gf2_A 2 PVGFIGL-GNMGNPMAKNLMKHGYPLI-IYDVFPDACKEFQDAGEQVVSSPADVAE--KADRIITMLPTSINAIEAYSGA 77 (296)
T ss_dssp CEEEECC-STTHHHHHHHHHHTTCCEE-EECSSTHHHHHHHTTTCEECSSHHHHHH--HCSEEEECCSSHHHHHHHHHST
T ss_pred eEEEEec-cHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHcCCeecCCHHHHHh--cCCEEEEeCCCHHHHHHHHhCc
Confidence 4667798 9999999999999998854 66665410 11 137778889988765 48999999965 4566666542
Q ss_pred ---HH-cCCcEEEEecCCCChhhHHHHHHHHhccCCcEEE
Q 019500 120 ---ME-AELDLVVCITEGIPQHDMVRVKAALNNQSKTRLV 155 (340)
Q Consensus 120 ---~~-~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girvi 155 (340)
.+ ..-..+++-++|.+.+..+++.+.+ ++.+..++
T Consensus 78 ~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~-~~~g~~~~ 116 (296)
T 2gf2_A 78 NGILKKVKKGSLLIDSSTIDPAVSKELAKEV-EKMGAVFM 116 (296)
T ss_dssp TSGGGTCCTTCEEEECSCCCHHHHHHHHHHH-HHTTCEEE
T ss_pred hhHHhcCCCCCEEEECCCCCHHHHHHHHHHH-HHcCCEEE
Confidence 11 1122344457888776666665554 33455443
No 111
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=97.31 E-value=0.00061 Score=68.73 Aligned_cols=110 Identities=12% Similarity=0.067 Sum_probs=72.1
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee-------cCcccccCHHHhhcc-CCCcEEEEecCh-hhH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH-------LGLPVFNTVAEAKAE-TKANASAIYVPP-PFA 112 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i-------~G~p~y~sl~dip~~-~~vDlavi~vp~-~~v 112 (340)
.+|.|+|+ |.||..++++|.+.|+++. ..|++... +.+ .|+....+++++.+. .++|++++++|+ ..+
T Consensus 11 ~~IgvIGl-G~MG~~lA~~La~~G~~V~-v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 88 (497)
T 2p4q_A 11 ADFGLIGL-AVMGQNLILNAADHGFTVC-AYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPV 88 (497)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCCEE-EECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHH
T ss_pred CCEEEEee-HHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHH
Confidence 34666799 9999999999999999865 66665410 111 367778899987752 138999999999 577
Q ss_pred HHHHHHHHHcC-C-cEEEEecCCCChhhHHHHHHHHhccCCcEEEc
Q 019500 113 AAAILEAMEAE-L-DLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (340)
Q Consensus 113 ~~~v~ea~~~G-v-k~vvi~t~Gf~e~~~~~l~~~aar~~girviG 156 (340)
.+++++....= - +.+|..+++.+ .+..++.+.+ ++.|+++++
T Consensus 89 ~~vl~~l~~~l~~g~iIId~s~~~~-~~~~~l~~~l-~~~g~~~v~ 132 (497)
T 2p4q_A 89 DALINQIVPLLEKGDIIIDGGNSHF-PDSNRRYEEL-KKKGILFVG 132 (497)
T ss_dssp HHHHHHHGGGCCTTCEEEECSCCCH-HHHHHHHHHH-HHTTCEEEE
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCh-hHHHHHHHHH-HHcCCceeC
Confidence 88887665431 1 23333455543 3344444444 456777664
No 112
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.29 E-value=0.00039 Score=54.54 Aligned_cols=86 Identities=15% Similarity=0.068 Sum_probs=60.7
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcC-CeEEEeeCCCCCC-cee--cCcccc-------cCHHHhhccCCCcEEEEecChh
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYG-TKMVGGVTPKKGG-TEH--LGLPVF-------NTVAEAKAETKANASAIYVPPP 110 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G-~~vv~~VnP~~~g-~~i--~G~p~y-------~sl~dip~~~~vDlavi~vp~~ 110 (340)
..+|+|+|+ |.+|+.+++.|.+.| ++++ .++++... +.. .++..+ .++.++.+ ++|+++.++|..
T Consensus 5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~-~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~~~~~ 80 (118)
T 3ic5_A 5 RWNICVVGA-GKIGQMIAALLKTSSNYSVT-VADHDLAALAVLNRMGVATKQVDAKDEAGLAKALG--GFDAVISAAPFF 80 (118)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCSSEEEE-EEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTT--TCSEEEECSCGG
T ss_pred cCeEEEECC-CHHHHHHHHHHHhCCCceEE-EEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHc--CCCEEEECCCch
Confidence 457888899 999999999999999 7754 55543210 111 122221 23444444 599999999999
Q ss_pred hHHHHHHHHHHcCCcEEEEecC
Q 019500 111 FAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 111 ~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
....+++.|.+.|++.+. +++
T Consensus 81 ~~~~~~~~~~~~g~~~~~-~~~ 101 (118)
T 3ic5_A 81 LTPIIAKAAKAAGAHYFD-LTE 101 (118)
T ss_dssp GHHHHHHHHHHTTCEEEC-CCS
T ss_pred hhHHHHHHHHHhCCCEEE-ecC
Confidence 999999999999998743 554
No 113
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=97.28 E-value=0.0006 Score=65.63 Aligned_cols=90 Identities=12% Similarity=0.053 Sum_probs=64.4
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcC-CeEEEeeCCCCCCceec-------Cc--ccccCHHHhhccCCCcEEEEecChhh
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYG-TKMVGGVTPKKGGTEHL-------GL--PVFNTVAEAKAETKANASAIYVPPPF 111 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G-~~vv~~VnP~~~g~~i~-------G~--p~y~sl~dip~~~~vDlavi~vp~~~ 111 (340)
+++|.|+|++|..|+.+++.|.+.. +++++..+....|..+. |. ..+.+++++ . ++|+++.++|...
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~~-~--~vDvV~~a~g~~~ 80 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEKL-E--PADILVLALPHGV 80 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGGC-C--CCSEEEECCCTTH
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchhHh-c--CCCEEEEcCCcHH
Confidence 4789999999999999999998764 57775555443333322 10 112233333 2 6999999999999
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCC
Q 019500 112 AAAAILEAMEAELDLVVCITEGIP 135 (340)
Q Consensus 112 v~~~v~ea~~~Gvk~vvi~t~Gf~ 135 (340)
..+.+..+.++|++ +|.+++-|.
T Consensus 81 s~~~a~~~~~aG~~-VId~Sa~~r 103 (345)
T 2ozp_A 81 FAREFDRYSALAPV-LVDLSADFR 103 (345)
T ss_dssp HHHTHHHHHTTCSE-EEECSSTTS
T ss_pred HHHHHHHHHHCCCE-EEEcCcccc
Confidence 99999999999998 466676664
No 114
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=97.27 E-value=0.00043 Score=61.87 Aligned_cols=92 Identities=15% Similarity=0.102 Sum_probs=62.6
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ce---ecCcccccCHHHhhccCCCcEEEEecChhhHHHHH
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE---HLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAI 116 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~---i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v 116 (340)
+..+|.|+|+ |++|..+++.|.+.|++++...+++... +. -.|...+.+..+..+ +.|++++++|+..+.+++
T Consensus 22 ~mmkI~IIG~-G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~--~aDvVilavp~~~~~~v~ 98 (220)
T 4huj_A 22 SMTTYAIIGA-GAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDAL--QADVVILAVPYDSIADIV 98 (220)
T ss_dssp GSCCEEEEEC-HHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHT--TSSEEEEESCGGGHHHHH
T ss_pred cCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHh--cCCEEEEeCChHHHHHHH
Confidence 3457788897 9999999999999999876446665411 11 135555544444443 489999999999999988
Q ss_pred HHHHHcCCcEEEEecCCCC
Q 019500 117 LEAMEAELDLVVCITEGIP 135 (340)
Q Consensus 117 ~ea~~~Gvk~vvi~t~Gf~ 135 (340)
++.....-+.++-.+.|+.
T Consensus 99 ~~l~~~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 99 TQVSDWGGQIVVDASNAID 117 (220)
T ss_dssp TTCSCCTTCEEEECCCCBC
T ss_pred HHhhccCCCEEEEcCCCCC
Confidence 7764322235565666763
No 115
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.26 E-value=0.00054 Score=65.06 Aligned_cols=90 Identities=14% Similarity=0.074 Sum_probs=67.2
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHH-c-CCeEEEeeCCCCC--Cce---ecCccc-ccCHHHhhcc---CCCcEEEEecCh
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIE-Y-GTKMVGGVTPKKG--GTE---HLGLPV-FNTVAEAKAE---TKANASAIYVPP 109 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~-~-G~~vv~~VnP~~~--g~~---i~G~p~-y~sl~dip~~---~~vDlavi~vp~ 109 (340)
+.++|.|+|+ |.+|+.+++.+.+ . +.++++.++++.. +.. -.|.+. +.+++++.+. .++|++++++|.
T Consensus 3 ~~irVaIIG~-G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp~ 81 (312)
T 1nvm_B 3 QKLKVAIIGS-GNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSA 81 (312)
T ss_dssp SCEEEEEECC-SHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCH
T ss_pred CCCEEEEEcC-cHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCCh
Confidence 4578999996 9999999998865 4 6777777776532 122 356663 5678887542 359999999999
Q ss_pred hhHHHHHHHHHHc--CCcEEEEecC
Q 019500 110 PFAAAAILEAMEA--ELDLVVCITE 132 (340)
Q Consensus 110 ~~v~~~v~ea~~~--Gvk~vvi~t~ 132 (340)
+.+.+.+.+|+++ |.+. +..++
T Consensus 82 ~~h~~~a~~al~a~~Gk~V-i~ekp 105 (312)
T 1nvm_B 82 SAHVQNEALLRQAKPGIRL-IDLTP 105 (312)
T ss_dssp HHHHHHHHHHHHHCTTCEE-EECST
T ss_pred HHHHHHHHHHHHhCCCCEE-EEcCc
Confidence 9999999999999 9875 44444
No 116
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=97.25 E-value=0.0004 Score=64.96 Aligned_cols=109 Identities=16% Similarity=0.122 Sum_probs=71.4
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCce-----ecCccc-ccCHHHhhccCCCcEEEEecChh-hHH
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE-----HLGLPV-FNTVAEAKAETKANASAIYVPPP-FAA 113 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~-----i~G~p~-y~sl~dip~~~~vDlavi~vp~~-~v~ 113 (340)
+..+|.|+|+ |+||..++++|.+.|+++. ..|++. +. -.|... ..+++|+.+ ..|++++++|.. .+.
T Consensus 6 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~-~~dr~~--~~~~~~~~~g~~~~~~~~~e~~~--~aDvvi~~vp~~~~~~ 79 (303)
T 3g0o_A 6 TDFHVGIVGL-GSMGMGAARSCLRAGLSTW-GADLNP--QACANLLAEGACGAAASAREFAG--VVDALVILVVNAAQVR 79 (303)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCH--HHHHHHHHTTCSEEESSSTTTTT--TCSEEEECCSSHHHHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCeEE-EEECCH--HHHHHHHHcCCccccCCHHHHHh--cCCEEEEECCCHHHHH
Confidence 3456778899 9999999999999999855 666654 21 136555 778888876 589999999985 444
Q ss_pred HHH---HHHHHc-CCcEEEEecCCCChhhHHHHHHHHhccCCcEEEc
Q 019500 114 AAI---LEAMEA-ELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (340)
Q Consensus 114 ~~v---~ea~~~-Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviG 156 (340)
+++ ++..+. .-..+++-++.......+++.+.+ ++.|+.++.
T Consensus 80 ~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~-~~~g~~~~~ 125 (303)
T 3g0o_A 80 QVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAAL-TALNLNMLD 125 (303)
T ss_dssp HHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHH-HTTTCEEEE
T ss_pred HHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHH-HHcCCeEEe
Confidence 444 332221 122345555555555555666555 566777664
No 117
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=97.23 E-value=0.00096 Score=61.18 Aligned_cols=106 Identities=10% Similarity=-0.068 Sum_probs=66.3
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee--cCcccccCHHHhhccCCCcEEEEecChhh-HHHHHHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH--LGLPVFNTVAEAKAETKANASAIYVPPPF-AAAAILEA 119 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i--~G~p~y~sl~dip~~~~vDlavi~vp~~~-v~~~v~ea 119 (340)
+|.|+|+ |.+|..+++.|.+ |+++. .+|++... +.+ .|+..+. ++++.+ +.|++++++|... +.+++++.
T Consensus 3 ~i~iiG~-G~~G~~~a~~l~~-g~~V~-~~~~~~~~~~~~~~~g~~~~~-~~~~~~--~~D~vi~~v~~~~~~~~v~~~l 76 (289)
T 2cvz_A 3 KVAFIGL-GAMGYPMAGHLAR-RFPTL-VWNRTFEKALRHQEEFGSEAV-PLERVA--EARVIFTCLPTTREVYEVAEAL 76 (289)
T ss_dssp CEEEECC-STTHHHHHHHHHT-TSCEE-EECSSTHHHHHHHHHHCCEEC-CGGGGG--GCSEEEECCSSHHHHHHHHHHH
T ss_pred eEEEEcc-cHHHHHHHHHHhC-CCeEE-EEeCCHHHHHHHHHCCCcccC-HHHHHh--CCCEEEEeCCChHHHHHHHHHH
Confidence 4667799 9999999999999 99854 66765410 111 2555555 666554 4899999999765 66666655
Q ss_pred HHc-CCcEEEEecCCCChhhHHHHHHHHhccCCcEEEc
Q 019500 120 MEA-ELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (340)
Q Consensus 120 ~~~-Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviG 156 (340)
.+. .-..+++..+.......+++.+.+ ++.|+.++.
T Consensus 77 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~-~~~g~~~~~ 113 (289)
T 2cvz_A 77 YPYLREGTYWVDATSGEPEASRRLAERL-REKGVTYLD 113 (289)
T ss_dssp TTTCCTTEEEEECSCCCHHHHHHHHHHH-HTTTEEEEE
T ss_pred HhhCCCCCEEEECCCCCHHHHHHHHHHH-HHcCCEEEE
Confidence 432 223444444444444445566655 455777663
No 118
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=97.22 E-value=0.0011 Score=62.40 Aligned_cols=107 Identities=12% Similarity=0.154 Sum_probs=72.5
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ce--ecCcccccCHHHhhccCCCcEEEEecChhhHHHHHHHH-
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEA- 119 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~--i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ea- 119 (340)
+|.++|. |+||...+++|.+.||++. ..|..... +. -.|.....|++|+.+ ..|+++.++|.....+.+-.-
T Consensus 5 kIgfIGl-G~MG~~mA~~L~~~G~~v~-v~dr~~~~~~~l~~~Ga~~a~s~~e~~~--~~dvv~~~l~~~~~v~~V~~~~ 80 (300)
T 3obb_A 5 QIAFIGL-GHMGAPMATNLLKAGYLLN-VFDLVQSAVDGLVAAGASAARSARDAVQ--GADVVISMLPASQHVEGLYLDD 80 (300)
T ss_dssp EEEEECC-STTHHHHHHHHHHTTCEEE-EECSSHHHHHHHHHTTCEECSSHHHHHT--TCSEEEECCSCHHHHHHHHHSS
T ss_pred EEEEeee-hHHHHHHHHHHHhCCCeEE-EEcCCHHHHHHHHHcCCEEcCCHHHHHh--cCCceeecCCchHHHHHHHhch
Confidence 5667799 9999999999999999854 55554310 11 257888899999987 599999999986654443321
Q ss_pred --HHcCC--cEEEEecCCCChhhHHHHHHHHhccCCcEEE
Q 019500 120 --MEAEL--DLVVCITEGIPQHDMVRVKAALNNQSKTRLV 155 (340)
Q Consensus 120 --~~~Gv--k~vvi~t~Gf~e~~~~~l~~~aar~~girvi 155 (340)
+..+. ..+||-.+-.+.++.+++.+.+ +++|+.++
T Consensus 81 ~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~-~~~G~~~l 119 (300)
T 3obb_A 81 DGLLAHIAPGTLVLECSTIAPTSARKIHAAA-RERGLAML 119 (300)
T ss_dssp SSSTTSCCC-CEEEECSCCCHHHHHHHHHHH-HTTTCEEE
T ss_pred hhhhhcCCCCCEEEECCCCCHHHHHHHHHHH-HHcCCEEE
Confidence 11111 2344444445566667777766 67888877
No 119
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=97.21 E-value=0.00088 Score=66.98 Aligned_cols=109 Identities=17% Similarity=0.128 Sum_probs=71.2
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee--c----CcccccCHHHhhcc-CCCcEEEEecCh-hhHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH--L----GLPVFNTVAEAKAE-TKANASAIYVPP-PFAAA 114 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i--~----G~p~y~sl~dip~~-~~vDlavi~vp~-~~v~~ 114 (340)
+|.|+|+ |.||+.++++|.+.|+++. ..|++... +.+ . |+..+.+++++.+. .++|++++++|+ ..+.+
T Consensus 7 ~IgvIG~-G~mG~~lA~~L~~~G~~V~-v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~ 84 (474)
T 2iz1_A 7 NFGVVGM-AVMGKNLALNVESRGYTVA-IYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDA 84 (474)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEE-EECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHH
T ss_pred cEEEEee-HHHHHHHHHHHHhCCCEEE-EEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHH
Confidence 4667799 9999999999999999854 67765310 111 1 67788899998652 138999999999 46777
Q ss_pred HHHHHHHc-CC-cEEEEecCCCChhhHHHHHHHHhccCCcEEEc
Q 019500 115 AILEAMEA-EL-DLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (340)
Q Consensus 115 ~v~ea~~~-Gv-k~vvi~t~Gf~e~~~~~l~~~aar~~girviG 156 (340)
++++.... .- +.++..+++.. .+..++.+.+ ++.|+++++
T Consensus 85 vl~~l~~~l~~g~iiId~s~~~~-~~~~~l~~~l-~~~g~~~v~ 126 (474)
T 2iz1_A 85 TIKSLLPLLDIGDILIDGGNTHF-PDTMRRNAEL-ADSGINFIG 126 (474)
T ss_dssp HHHHHGGGCCTTCEEEECSCCCH-HHHHHHHHHT-TTSSCEEEE
T ss_pred HHHHHHhhCCCCCEEEECCCCCH-HHHHHHHHHH-HHCCCeEEC
Confidence 77665432 11 23344455553 3334455554 556777663
No 120
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=97.21 E-value=0.00059 Score=68.47 Aligned_cols=109 Identities=17% Similarity=0.090 Sum_probs=71.8
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee--c----CcccccCHHHhhcc-CCCcEEEEecCh-hhHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH--L----GLPVFNTVAEAKAE-TKANASAIYVPP-PFAAA 114 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i--~----G~p~y~sl~dip~~-~~vDlavi~vp~-~~v~~ 114 (340)
+|.|+|+ |.||+.++++|.+.|+++. ..|++... +++ . |+....+++++... .++|++++++|+ ..+.+
T Consensus 17 ~IgvIGl-G~MG~~lA~~La~~G~~V~-v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~ 94 (480)
T 2zyd_A 17 QIGVVGM-AVMGRNLALNIESRGYTVS-IFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTDA 94 (480)
T ss_dssp SEEEECC-SHHHHHHHHHHHTTTCCEE-EECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSHHHH
T ss_pred eEEEEcc-HHHHHHHHHHHHhCCCeEE-EEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHHHHH
Confidence 3566699 9999999999999999855 66765310 111 1 77788899887651 138999999999 57888
Q ss_pred HHHHHHHcC-C-cEEEEecCCCChhhHHHHHHHHhccCCcEEEc
Q 019500 115 AILEAMEAE-L-DLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (340)
Q Consensus 115 ~v~ea~~~G-v-k~vvi~t~Gf~e~~~~~l~~~aar~~girviG 156 (340)
++++....- - ..+|..+.|... +..++.+.+ ++.|+++++
T Consensus 95 vl~~l~~~l~~g~iIId~s~g~~~-~t~~l~~~l-~~~g~~~v~ 136 (480)
T 2zyd_A 95 AIDSLKPYLDKGDIIIDGGNTFFQ-DTIRRNREL-SAEGFNFIG 136 (480)
T ss_dssp HHHHHGGGCCTTCEEEECSCCCHH-HHHHHHHHH-HHTTCEEEE
T ss_pred HHHHHHhhcCCCCEEEECCCCCHH-HHHHHHHHH-HHCCCCeeC
Confidence 887765431 1 234445566543 333444444 455777663
No 121
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=97.21 E-value=0.00061 Score=65.52 Aligned_cols=107 Identities=14% Similarity=0.081 Sum_probs=71.6
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCce-----ecCcccccCHHHhhcc--CCCcEEEEecChhhHHHH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE-----HLGLPVFNTVAEAKAE--TKANASAIYVPPPFAAAA 115 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~-----i~G~p~y~sl~dip~~--~~vDlavi~vp~~~v~~~ 115 (340)
.+|.|+|+ |.||..+++.|.+.|++++ ..|++. +. -.|+..+.+++++... ...|++++++|+..+.++
T Consensus 9 ~kIgIIG~-G~mG~slA~~L~~~G~~V~-~~dr~~--~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~~~~~~v 84 (341)
T 3ktd_A 9 RPVCILGL-GLIGGSLLRDLHAANHSVF-GYNRSR--SGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPMTAIDSL 84 (341)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCEE-EECSCH--HHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCHHHHHHH
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCEEE-EEeCCH--HHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCHHHHHHH
Confidence 35677798 9999999999999999865 677654 22 2466667788776541 137999999999999998
Q ss_pred HHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEc
Q 019500 116 ILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (340)
Q Consensus 116 v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviG 156 (340)
+++.....-..+|+-.++....-.+++.+.. .+.++++
T Consensus 85 l~~l~~~~~~~iv~Dv~Svk~~i~~~~~~~~---~~~~~v~ 122 (341)
T 3ktd_A 85 LDAVHTHAPNNGFTDVVSVKTAVYDAVKARN---MQHRYVG 122 (341)
T ss_dssp HHHHHHHCTTCCEEECCSCSHHHHHHHHHTT---CGGGEEC
T ss_pred HHHHHccCCCCEEEEcCCCChHHHHHHHHhC---CCCcEec
Confidence 8887766444444445555543333343321 1355664
No 122
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=97.19 E-value=0.0013 Score=65.95 Aligned_cols=109 Identities=12% Similarity=0.099 Sum_probs=70.8
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee-------cCcccccCHHHhhcc-CCCcEEEEecChh-hHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH-------LGLPVFNTVAEAKAE-TKANASAIYVPPP-FAA 113 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i-------~G~p~y~sl~dip~~-~~vDlavi~vp~~-~v~ 113 (340)
+|.|+|+ |.||..++.+|.+.|+++. .+|++... +.+ .|+..+.+++++.+. .++|++++++|+. .+.
T Consensus 4 ~IgvIG~-G~mG~~lA~~La~~G~~V~-v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~ 81 (482)
T 2pgd_A 4 DIALIGL-AVMGQNLILNMNDHGFVVC-AFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD 81 (482)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEE-EECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred eEEEECh-HHHHHHHHHHHHHCCCeEE-EEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHH
Confidence 4667798 9999999999999999854 66765410 111 457778899988631 1489999999995 778
Q ss_pred HHHHHHHHc-CC-cEEEEecCCCChhhHHHHHHHHhccCCcEEEc
Q 019500 114 AAILEAMEA-EL-DLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (340)
Q Consensus 114 ~~v~ea~~~-Gv-k~vvi~t~Gf~e~~~~~l~~~aar~~girviG 156 (340)
+++++.... .- +.+|..+++... +..++.+.+ ++.|+.+++
T Consensus 82 ~vl~~l~~~l~~g~iII~~s~~~~~-~~~~l~~~l-~~~g~~~v~ 124 (482)
T 2pgd_A 82 NFIEKLVPLLDIGDIIIDGGNSEYR-DTMRRCRDL-KDKGILFVG 124 (482)
T ss_dssp HHHHHHHHHCCTTCEEEECSCCCHH-HHHHHHHHH-HHTTCEEEE
T ss_pred HHHHHHHhhcCCCCEEEECCCCCHH-HHHHHHHHH-HHcCCeEeC
Confidence 888766543 11 234445556543 333444444 345777653
No 123
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=97.18 E-value=0.00088 Score=63.35 Aligned_cols=107 Identities=13% Similarity=0.051 Sum_probs=73.1
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcC-CeEEEeeCCCCC--C--ce------ecCccccc-CHHHhhccCCCcEEEEecChh
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYG-TKMVGGVTPKKG--G--TE------HLGLPVFN-TVAEAKAETKANASAIYVPPP 110 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G-~~vv~~VnP~~~--g--~~------i~G~p~y~-sl~dip~~~~vDlavi~vp~~ 110 (340)
.+|.|+|+ |.||..++++|.+.| ++++ ..|++.. . ++ -.|. .. +++++.+ +.|++++++|+.
T Consensus 25 m~IgvIG~-G~mG~~lA~~L~~~G~~~V~-~~dr~~~~~~~~~~~~~~~~~~g~--~~~s~~e~~~--~aDvVi~avp~~ 98 (317)
T 4ezb_A 25 TTIAFIGF-GEAAQSIAGGLGGRNAARLA-AYDLRFNDPAASGALRARAAELGV--EPLDDVAGIA--CADVVLSLVVGA 98 (317)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTTCSEEE-EECGGGGCTTTHHHHHHHHHHTTC--EEESSGGGGG--GCSEEEECCCGG
T ss_pred CeEEEECc-cHHHHHHHHHHHHcCCCeEE-EEeCCCccccchHHHHHHHHHCCC--CCCCHHHHHh--cCCEEEEecCCH
Confidence 46778898 999999999999999 8855 5554420 0 01 1355 66 7888776 489999999999
Q ss_pred hHHHHHHHHHHc-CCcEEEEecCCCChhhHHHHHHHHhccCCcEEEc
Q 019500 111 FAAAAILEAMEA-ELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (340)
Q Consensus 111 ~v~~~v~ea~~~-Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviG 156 (340)
...+.+++..+. .-..+++-.+.......+++.+.+ ++.|++++.
T Consensus 99 ~~~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l-~~~g~~~~d 144 (317)
T 4ezb_A 99 ATKAVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAI-ATGKGSFVE 144 (317)
T ss_dssp GHHHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHH-HTSSCEEEE
T ss_pred HHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHH-HHcCCeEEe
Confidence 998888766553 223445555666666566666655 456766543
No 124
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=97.18 E-value=0.00024 Score=67.33 Aligned_cols=90 Identities=19% Similarity=0.231 Sum_probs=62.1
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee--cC-----------cccccCHHHhhccCCCcEEEEecC
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH--LG-----------LPVFNTVAEAKAETKANASAIYVP 108 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i--~G-----------~p~y~sl~dip~~~~vDlavi~vp 108 (340)
.+|.|+|+ |.||.....+|.+.|+++. .+|+.... +.+ .| +++..+.++ .+ +.|++++++|
T Consensus 15 ~kI~iIG~-G~mG~ala~~L~~~G~~V~-~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~--~aDvVil~vk 89 (335)
T 1z82_A 15 MRFFVLGA-GSWGTVFAQMLHENGEEVI-LWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IK--KEDILVIAIP 89 (335)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CC--TTEEEEECSC
T ss_pred CcEEEECc-CHHHHHHHHHHHhCCCeEE-EEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hc--CCCEEEEECC
Confidence 45667799 9999999999999999855 66654300 111 12 456667777 44 5899999999
Q ss_pred hhhHHHHHHHHHHcCCcEEEEecCCCChhh
Q 019500 109 PPFAAAAILEAMEAELDLVVCITEGIPQHD 138 (340)
Q Consensus 109 ~~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~ 138 (340)
+..+.+++++... .-+.+|.++.|+..++
T Consensus 90 ~~~~~~v~~~l~~-~~~~vv~~~nGi~~~~ 118 (335)
T 1z82_A 90 VQYIREHLLRLPV-KPSMVLNLSKGIEIKT 118 (335)
T ss_dssp GGGHHHHHTTCSS-CCSEEEECCCCCCTTT
T ss_pred HHHHHHHHHHhCc-CCCEEEEEeCCCCCCc
Confidence 9988888876433 2235666777886543
No 125
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=97.17 E-value=0.00095 Score=64.17 Aligned_cols=92 Identities=11% Similarity=0.084 Sum_probs=66.8
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCC---CCCceec-------C---ccccc--CHHHhhccCCCcEEE
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPK---KGGTEHL-------G---LPVFN--TVAEAKAETKANASA 104 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~---~~g~~i~-------G---~p~y~--sl~dip~~~~vDlav 104 (340)
.+++|.|+|++|..|..+.+.|.++ .+++......+ ..|+.+. | +++.+ +.+++.+ ++|+++
T Consensus 3 ~M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~--~~Dvvf 80 (337)
T 3dr3_A 3 AMLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSP--GVDVVF 80 (337)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCT--TCSEEE
T ss_pred CceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhc--CCCEEE
Confidence 3578999999999999999998885 66766554433 3344332 2 12221 3444422 599999
Q ss_pred EecChhhHHHHHHHHHHcCCcEEEEecCCCC
Q 019500 105 IYVPPPFAAAAILEAMEAELDLVVCITEGIP 135 (340)
Q Consensus 105 i~vp~~~v~~~v~ea~~~Gvk~vvi~t~Gf~ 135 (340)
.|+|.....+.+.++.++|++. |.+++-|.
T Consensus 81 ~a~p~~~s~~~~~~~~~~g~~v-IDlSa~fR 110 (337)
T 3dr3_A 81 LATAHEVSHDLAPQFLEAGCVV-FDLSGAFR 110 (337)
T ss_dssp ECSCHHHHHHHHHHHHHTTCEE-EECSSTTS
T ss_pred ECCChHHHHHHHHHHHHCCCEE-EEcCCccc
Confidence 9999999999999999999986 66888774
No 126
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=97.10 E-value=0.0021 Score=60.05 Aligned_cols=96 Identities=11% Similarity=0.153 Sum_probs=65.2
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChhhHHHHHHHHHHc-
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEAMEA- 122 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ea~~~- 122 (340)
+|.|+|..|.||..+++.|.+.|+++. .++++. + .+..+... +.|++++++|+..+.+++++....
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~V~-~~~~~~--~--------~~~~~~~~--~aDvVilavp~~~~~~vl~~l~~~l 89 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYPIS-ILDRED--W--------AVAESILA--NADVVIVSVPINLTLETIERLKPYL 89 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCEE-EECTTC--G--------GGHHHHHT--TCSEEEECSCGGGHHHHHHHHGGGC
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCeEE-EEECCc--c--------cCHHHHhc--CCCEEEEeCCHHHHHHHHHHHHhhc
Confidence 577779339999999999999999855 677665 2 24556554 589999999999999999887542
Q ss_pred CCcEEEEecCCCChhhHHHHHHHHhccCCcEEEc
Q 019500 123 ELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (340)
Q Consensus 123 Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviG 156 (340)
.-..+|+..++......+++.+. .+.++++
T Consensus 90 ~~~~iv~~~~svk~~~~~~~~~~----~~~~~v~ 119 (298)
T 2pv7_A 90 TENMLLADLTSVKREPLAKMLEV----HTGAVLG 119 (298)
T ss_dssp CTTSEEEECCSCCHHHHHHHHHH----CSSEEEE
T ss_pred CCCcEEEECCCCCcHHHHHHHHh----cCCCEEe
Confidence 22335555566654434444322 2356664
No 127
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=97.08 E-value=0.00061 Score=65.37 Aligned_cols=153 Identities=10% Similarity=0.048 Sum_probs=91.8
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHc---------CCeEEEeeCCCCCC-ceecCcccccCHHHhhccCCCcEEEEecChh-
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEY---------GTKMVGGVTPKKGG-TEHLGLPVFNTVAEAKAETKANASAIYVPPP- 110 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~---------G~~vv~~VnP~~~g-~~i~G~p~y~sl~dip~~~~vDlavi~vp~~- 110 (340)
.++|.|+|+ |.+|+.+++.+.+. ++++++..+.+... ..+.....|.+++++. ++|++++++|..
T Consensus 3 ~irvgIiG~-G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~~~~~~~~~d~~~ll---~iDvVve~t~~~~ 78 (332)
T 2ejw_A 3 ALKIALLGG-GTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRAIPQELLRAEPFDLL---EADLVVEAMGGVE 78 (332)
T ss_dssp EEEEEEECC-SHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCCSSCGGGEESSCCCCT---TCSEEEECCCCSH
T ss_pred eeEEEEEcC-CHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhhccCcccccCCHHHHh---CCCEEEECCCCcH
Confidence 478889999 99999999888764 45677776655311 1232234677888887 499999999976
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCCCCcccCC--CcccccCCCCCCCCCcEEEEe-
Q 019500 111 FAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPG--ECKIGIMPGYIHKPGRIGIVS- 187 (340)
Q Consensus 111 ~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc~Gi~~p~--~~~~~~~~~~~~~~G~valvS- 187 (340)
.+.+.+++|+++|.+.+. .....-.++..+|.+++ +++.+++-+ + .|--.|. .++ . ...|.|.=|.
T Consensus 79 ~a~~~~~~AL~aGKhVVt-aNkkpla~~~~eL~~~A-~~~~~~~Ea-~-vg~giPii~~l~-~------l~~~~I~~I~g 147 (332)
T 2ejw_A 79 APLRLVLPALEAGIPLIT-ANKALLAEAWESLRPFA-EEGLIYHEA-S-VMAGTPALSFLE-T------LRGSELLELHG 147 (332)
T ss_dssp HHHHHHHHHHHTTCCEEE-CCHHHHHHSHHHHHHHH-HTTCEECGG-G-TTTTSSSHHHHH-H------HTTSEEEEEEE
T ss_pred HHHHHHHHHHHcCCeEEE-CCchhHHHHHHHHHHHH-HhCCeEEEE-E-cccCCHHHHHHH-H------hcCCCcceEEE
Confidence 567899999999998633 11121113456677765 555333322 2 2211233 122 1 2335666553
Q ss_pred -cChHHHHHHHHHHHhCCCCceEEe
Q 019500 188 -RSGTLTYEAVFQTTAVGLGQSTCV 211 (340)
Q Consensus 188 -QSG~l~~~~~~~~~~~giG~S~~v 211 (340)
.+|+..+ ++.... .|..|+.++
T Consensus 148 I~nGT~ny-il~~m~-~g~~f~~~l 170 (332)
T 2ejw_A 148 ILNGTTLY-ILQEME-KGRTYAEAL 170 (332)
T ss_dssp ECCHHHHH-HHHHHH-TTCCHHHHH
T ss_pred EEeccccc-ccCccc-cCCCHHHHH
Confidence 3676643 444333 566666554
No 128
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=97.07 E-value=0.0016 Score=59.62 Aligned_cols=94 Identities=11% Similarity=0.100 Sum_probs=64.8
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCcee-----cCcc--cccCHHHhhccCCCcEEEEecChhhHHHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH-----LGLP--VFNTVAEAKAETKANASAIYVPPPFAAAAI 116 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i-----~G~p--~y~sl~dip~~~~vDlavi~vp~~~v~~~v 116 (340)
+|.|+|+ |++|+.+++.|.+.|++++ .++++. +.. .|++ .+.+++++ . +.|++++++|+..+.+++
T Consensus 2 ~i~iiG~-G~~G~~~a~~l~~~g~~V~-~~~~~~--~~~~~~~~~g~~~~~~~~~~~~-~--~~D~vi~av~~~~~~~~~ 74 (279)
T 2f1k_A 2 KIGVVGL-GLIGASLAGDLRRRGHYLI-GVSRQQ--STCEKAVERQLVDEAGQDLSLL-Q--TAKIIFLCTPIQLILPTL 74 (279)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCH--HHHHHHHHTTSCSEEESCGGGG-T--TCSEEEECSCHHHHHHHH
T ss_pred EEEEEcC-cHHHHHHHHHHHHCCCEEE-EEECCH--HHHHHHHhCCCCccccCCHHHh-C--CCCEEEEECCHHHHHHHH
Confidence 5777898 9999999999999999754 667653 211 2442 46778887 4 599999999999999988
Q ss_pred HHHHHc-CCcEEEEecCCCChhhHHHHHH
Q 019500 117 LEAMEA-ELDLVVCITEGIPQHDMVRVKA 144 (340)
Q Consensus 117 ~ea~~~-Gvk~vvi~t~Gf~e~~~~~l~~ 144 (340)
++.... .-..+++-.++......+++.+
T Consensus 75 ~~l~~~~~~~~~vv~~~~~~~~~~~~~~~ 103 (279)
T 2f1k_A 75 EKLIPHLSPTAIVTDVASVKTAIAEPASQ 103 (279)
T ss_dssp HHHGGGSCTTCEEEECCSCCHHHHHHHHH
T ss_pred HHHHhhCCCCCEEEECCCCcHHHHHHHHH
Confidence 876543 2233444445565444444443
No 129
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.06 E-value=0.00085 Score=64.97 Aligned_cols=108 Identities=12% Similarity=0.166 Sum_probs=71.1
Q ss_pred CcCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee---cC-----cccccCHHHhhccCCCcEEEEecCh
Q 019500 39 VDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH---LG-----LPVFNTVAEAKAETKANASAIYVPP 109 (340)
Q Consensus 39 ~p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i---~G-----~p~y~sl~dip~~~~vDlavi~vp~ 109 (340)
.-+..+|+|+|+ |.+|+.+++.|.+. +++. ..|.+... +++ .+ +.-+.+++++.+ ++|++|.++|+
T Consensus 13 ~~~~~~v~IiGa-G~iG~~ia~~L~~~-~~V~-V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~--~~DvVIn~~P~ 87 (365)
T 2z2v_A 13 EGRHMKVLILGA-GNIGRAIAWDLKDE-FDVY-IGDVNNENLEKVKEFATPLKVDASNFDKLVEVMK--EFELVIGALPG 87 (365)
T ss_dssp ---CCEEEEECC-SHHHHHHHHHHTTT-SEEE-EEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHT--TCSCEEECCCH
T ss_pred cCCCCeEEEEcC-CHHHHHHHHHHHcC-CeEE-EEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHh--CCCEEEECCCh
Confidence 346778889999 99999999999887 6633 55554310 111 11 112346677665 59999999999
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEE
Q 019500 110 PFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLV 155 (340)
Q Consensus 110 ~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girvi 155 (340)
....++++.|++.|++.+ -++ ..++ +..++.+.+ ++.|+.++
T Consensus 88 ~~~~~v~~a~l~~G~~~v-D~s-~~~~-~~~~l~~~A-k~aG~~~l 129 (365)
T 2z2v_A 88 FLGFKSIKAAIKSKVDMV-DVS-FMPE-NPLELRDEA-EKAQVTIV 129 (365)
T ss_dssp HHHHHHHHHHHHTTCCEE-ECC-CCSS-CGGGGHHHH-HHTTCEEE
T ss_pred hhhHHHHHHHHHhCCeEE-Ecc-CCcH-HHHHHHHHH-HHcCCEEE
Confidence 999999999999999863 333 3332 223444444 67788776
No 130
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=97.05 E-value=0.0016 Score=65.51 Aligned_cols=111 Identities=12% Similarity=0.071 Sum_probs=70.4
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee-----cC--cccccCHHHhhcc-CCCcEEEEecChh-hH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH-----LG--LPVFNTVAEAKAE-TKANASAIYVPPP-FA 112 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i-----~G--~p~y~sl~dip~~-~~vDlavi~vp~~-~v 112 (340)
.+|.|+|. |+||..++++|.+.|++++ ..|++... +.+ .| +..+.+++|+.+. ..+|++++++|+. .+
T Consensus 5 ~kIgiIGl-G~MG~~lA~~L~~~G~~V~-v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 82 (484)
T 4gwg_A 5 ADIALIGL-AVMGQNLILNMNDHGFVVC-AFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAV 82 (484)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEE-EECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHH
T ss_pred CEEEEECh-hHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHH
Confidence 45677799 9999999999999999855 66665410 111 13 2336789998752 2489999999995 67
Q ss_pred HHHHHHHHHcC-Cc-EEEEecCCCChhhHHHHHHHHhccCCcEEEcc
Q 019500 113 AAAILEAMEAE-LD-LVVCITEGIPQHDMVRVKAALNNQSKTRLVGP 157 (340)
Q Consensus 113 ~~~v~ea~~~G-vk-~vvi~t~Gf~e~~~~~l~~~aar~~girviGP 157 (340)
.+++++....= -. .+|..+++. ..+..++.+.+ ++.|+.+++.
T Consensus 83 ~~vl~~l~~~L~~g~iIId~st~~-~~~t~~~~~~l-~~~Gi~fvd~ 127 (484)
T 4gwg_A 83 DDFIEKLVPLLDTGDIIIDGGNSE-YRDTTRRCRDL-KAKGILFVGS 127 (484)
T ss_dssp HHHHHHHGGGCCTTCEEEECSCCC-HHHHHHHHHHH-HHTTCEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCC-chHHHHHHHHH-HhhccccccC
Confidence 77777665432 22 333333444 33334444444 4568877754
No 131
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=97.04 E-value=0.0013 Score=63.40 Aligned_cols=90 Identities=17% Similarity=0.118 Sum_probs=62.6
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHc-CCeEEEee-CCCCCCcee---cC-----------cc-ccc--CHHHhhccCCCc
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGV-TPKKGGTEH---LG-----------LP-VFN--TVAEAKAETKAN 101 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~V-nP~~~g~~i---~G-----------~p-~y~--sl~dip~~~~vD 101 (340)
++++|.|+||+|.+|+.+++.|.+. .+++++.. ..+..|+.+ .+ .. .+. +.+++ + ++|
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~--~vD 79 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYEDH-K--DVD 79 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGGG-T--TCS
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHHh-c--CCC
Confidence 4578999999999999999988876 45676544 232222322 11 11 122 23333 2 599
Q ss_pred EEEEecChhhHHHHHHHHHHcCCcEEEEecCCC
Q 019500 102 ASAIYVPPPFAAAAILEAMEAELDLVVCITEGI 134 (340)
Q Consensus 102 lavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~Gf 134 (340)
++++++|.....+.+..+.++|++ +|-.++.|
T Consensus 80 vVf~atp~~~s~~~a~~~~~aG~~-VId~s~~~ 111 (350)
T 2ep5_A 80 VVLSALPNELAESIELELVKNGKI-VVSNASPF 111 (350)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTCE-EEECSSTT
T ss_pred EEEECCChHHHHHHHHHHHHCCCE-EEECCccc
Confidence 999999999999999999999999 45566555
No 132
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=97.03 E-value=0.0073 Score=59.16 Aligned_cols=123 Identities=15% Similarity=0.153 Sum_probs=88.5
Q ss_pred CCCcEEEEecChHHHHHHHHHHHhCCCCceEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEcc-CCCcHHHHHHHH
Q 019500 179 KPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEI-GGTAEEDAAALI 257 (340)
Q Consensus 179 ~~G~valvSQSG~l~~~~~~~~~~~giG~S~~vs~Gn~a~~dv~~~d~l~~l~~Dp~T~~I~ly~E~-~g~~~~~~~~f~ 257 (340)
..|+|++++-+|+++...+|.....|.-...++-+|+.+. .-.+.+.++.+..||+.++|++-+=+ +=+-..-++..+
T Consensus 262 l~G~Ig~~~nGaGlam~t~D~i~~~Gg~paNflDvgG~a~-~e~~~~al~~il~d~~v~~ilvni~ggi~~~d~vA~gii 340 (395)
T 2fp4_B 262 LDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVK-ESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGIT 340 (395)
T ss_dssp CSSSEEEEESSHHHHHHHHHHHHHTTCCBCEEEECCSSCC-HHHHHHHHHHHHHCTTCCEEEEEEEESSSCHHHHHHHHH
T ss_pred cCCeEEEEecCchHHHHHHHHHHHcCCCcCCcEEECCCCC-HHHHHHHHHHHhCCCCCCEEEEEecCCccCcHHHHHHHH
Confidence 4699999999999999999999999988888999988762 34567788999999999999975422 111112234444
Q ss_pred HHhC---CCCCEEEEEeCCCCCCCCcccccCcccccccccceecCCCCcHHHHHHHHHHcCCeec--CCHHHHHHHHHH
Q 019500 258 KESG---TEKPIVAFIAGLTAPPGRRMGHAGVDVYTIFGSAIVSGGKGTAQDKIKTLREAGVTVV--ESPAKIGAAMLE 331 (340)
Q Consensus 258 ~a~r---~~KPVvvlk~Grs~~~g~~~sHtg~~~~~~~~~ala~~~~g~~~~~~a~~~qaGvv~v--~~~~el~~~~~~ 331 (340)
++++ .+||||+-..|. +.+.-...|++.|+-.. +|+++-...+.+
T Consensus 341 ~a~~~~~~~~Pivvrl~G~-----------------------------n~~~g~~~L~~~gl~~~~~~~~~~Aa~~~v~ 390 (395)
T 2fp4_B 341 KACRELELKVPLVVRLEGT-----------------------------NVHEAQNILTNSGLPITSAVDLEDAAKKAVA 390 (395)
T ss_dssp HHHHHHTCCSCEEEEEEET-----------------------------THHHHHHHHHHTCSCCEECSSHHHHHHHHHH
T ss_pred HHHHhcCCCCeEEEEcCCC-----------------------------CHHHHHHHHHHCCCceEeCCCHHHHHHHHHH
Confidence 4443 689999865442 22334678888887666 788777666554
No 133
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=97.03 E-value=0.003 Score=57.93 Aligned_cols=98 Identities=14% Similarity=0.109 Sum_probs=65.6
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCC--eEEEeeCCCCCCce-----ecCcc--cccCHHHhhccCCCcEEEEecChhhHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGT--KMVGGVTPKKGGTE-----HLGLP--VFNTVAEAKAETKANASAIYVPPPFAAA 114 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~--~vv~~VnP~~~g~~-----i~G~p--~y~sl~dip~~~~vDlavi~vp~~~v~~ 114 (340)
+|.|+|+ |++|..+++.|.+.|+ +++ .+|++. +. -.|+. .+.++++.... +.|++++++|+....+
T Consensus 3 ~I~iIG~-G~mG~~~a~~l~~~g~~~~V~-~~d~~~--~~~~~~~~~g~~~~~~~~~~~~~~~-~aDvVilavp~~~~~~ 77 (281)
T 2g5c_A 3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIY-GYDINP--ESISKAVDLGIIDEGTTSIAKVEDF-SPDFVMLSSPVRTFRE 77 (281)
T ss_dssp EEEEESC-SHHHHHHHHHHHHTTCCSEEE-EECSCH--HHHHHHHHTTSCSEEESCGGGGGGT-CCSEEEECSCHHHHHH
T ss_pred EEEEEec-CHHHHHHHHHHHhcCCCcEEE-EEeCCH--HHHHHHHHCCCcccccCCHHHHhcC-CCCEEEEcCCHHHHHH
Confidence 5677798 9999999999999888 654 677754 21 13443 35677665541 3899999999999999
Q ss_pred HHHHHHHc-CCcEEEEecCCCChhhHHHHHHHH
Q 019500 115 AILEAMEA-ELDLVVCITEGIPQHDMVRVKAAL 146 (340)
Q Consensus 115 ~v~ea~~~-Gvk~vvi~t~Gf~e~~~~~l~~~a 146 (340)
++++.... .-+.+++..++......+.+.+..
T Consensus 78 v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l 110 (281)
T 2g5c_A 78 IAKKLSYILSEDATVTDQGSVKGKLVYDLENIL 110 (281)
T ss_dssp HHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHH
T ss_pred HHHHHHhhCCCCcEEEECCCCcHHHHHHHHHhc
Confidence 88876543 333445445555444444555544
No 134
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=97.02 E-value=0.0017 Score=61.38 Aligned_cols=92 Identities=16% Similarity=0.181 Sum_probs=65.5
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcC----CeEEEeeCCCCC--C-ce--ecCcccccCHHHhhccCCCcEEEEecChhhHH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYG----TKMVGGVTPKKG--G-TE--HLGLPVFNTVAEAKAETKANASAIYVPPPFAA 113 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G----~~vv~~VnP~~~--g-~~--i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~ 113 (340)
.+|.|+|+ |+||..++.+|.+.| +++. .+|++.. . +. -.|+.+..+..+..+ +.|++++++|+..+.
T Consensus 23 mkI~iIG~-G~mG~ala~~L~~~G~~~~~~V~-v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~--~aDvVilav~~~~~~ 98 (322)
T 2izz_A 23 MSVGFIGA-GQLAFALAKGFTAAGVLAAHKIM-ASSPDMDLATVSALRKMGVKLTPHNKETVQ--HSDVLFLAVKPHIIP 98 (322)
T ss_dssp CCEEEESC-SHHHHHHHHHHHHTTSSCGGGEE-EECSCTTSHHHHHHHHHTCEEESCHHHHHH--HCSEEEECSCGGGHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCcceEE-EECCCccHHHHHHHHHcCCEEeCChHHHhc--cCCEEEEEeCHHHHH
Confidence 35777799 999999999999988 6654 6676541 0 11 247777778877765 489999999999999
Q ss_pred HHHHHHHHc-CC-cEEEEecCCCChhh
Q 019500 114 AAILEAMEA-EL-DLVVCITEGIPQHD 138 (340)
Q Consensus 114 ~~v~ea~~~-Gv-k~vvi~t~Gf~e~~ 138 (340)
+++++.... .- +.++-++.|++.+.
T Consensus 99 ~vl~~l~~~l~~~~ivvs~s~gi~~~~ 125 (322)
T 2izz_A 99 FILDEIGADIEDRHIVVSCAAGVTISS 125 (322)
T ss_dssp HHHHHHGGGCCTTCEEEECCTTCCHHH
T ss_pred HHHHHHHhhcCCCCEEEEeCCCCCHHH
Confidence 998876542 11 34455567887543
No 135
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=97.02 E-value=0.0011 Score=63.72 Aligned_cols=87 Identities=14% Similarity=0.154 Sum_probs=62.8
Q ss_pred eEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCCCc----eecCcccccC-----------------HHHhhccCCC
Q 019500 43 TRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGT----EHLGLPVFNT-----------------VAEAKAETKA 100 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~g~----~i~G~p~y~s-----------------l~dip~~~~v 100 (340)
++|.|+|+ |++|+.+++.+.+. ++++++..++..... .-.|+|.|.+ ++++.+ ++
T Consensus 2 ikVgIiGa-G~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~--~v 78 (340)
T 1b7g_O 2 VNVAVNGY-GTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIK--TS 78 (340)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHH--HC
T ss_pred eEEEEEec-CHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhc--CC
Confidence 67889999 99999999998876 567776655442100 0124555533 334433 48
Q ss_pred cEEEEecChhhHHHHHHHHHHcCCcEEEEecCC
Q 019500 101 NASAIYVPPPFAAAAILEAMEAELDLVVCITEG 133 (340)
Q Consensus 101 Dlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~G 133 (340)
|++++|+|.....+..+.+++.|++.+. .+.-
T Consensus 79 DvV~~aTp~~~s~~~a~~~~~aG~kvV~-~sa~ 110 (340)
T 1b7g_O 79 DIVVDTTPNGVGAQYKPIYLQLQRNAIF-QGGE 110 (340)
T ss_dssp SEEEECCSTTHHHHHHHHHHHTTCEEEE-CTTS
T ss_pred CEEEECCCCchhHHHHHHHHHcCCeEEE-eCCC
Confidence 9999999999999999999999999744 5544
No 136
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=97.01 E-value=0.0016 Score=65.26 Aligned_cols=109 Identities=22% Similarity=0.201 Sum_probs=69.9
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ce---ecC-------cccccCHHHhhcc-CCCcEEEEecChh-
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE---HLG-------LPVFNTVAEAKAE-TKANASAIYVPPP- 110 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~---i~G-------~p~y~sl~dip~~-~~vDlavi~vp~~- 110 (340)
+|.|+|+ |.||+.++.+|.+.|+++. .+|++... +. -.| +..+.+++++.+. .++|++++++|+.
T Consensus 3 kIgVIG~-G~mG~~lA~~La~~G~~V~-v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~ 80 (478)
T 1pgj_A 3 DVGVVGL-GVMGANLALNIAEKGFKVA-VFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGA 80 (478)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEE-EECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSH
T ss_pred EEEEECh-HHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChH
Confidence 4667798 9999999999999999854 67765310 11 124 6677889887641 1389999999995
Q ss_pred hHHHHHHHHHHc-CC-cEEEEecCCCChhhHHHHHHHHhccCCcEEEc
Q 019500 111 FAAAAILEAMEA-EL-DLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (340)
Q Consensus 111 ~v~~~v~ea~~~-Gv-k~vvi~t~Gf~e~~~~~l~~~aar~~girviG 156 (340)
.+.+++++.... .- +.+|..+.|.. .+..++.+.+ ++.|+.+++
T Consensus 81 ~v~~vl~~l~~~l~~g~iIId~sng~~-~~~~~l~~~l-~~~g~~~v~ 126 (478)
T 1pgj_A 81 ATDSTIEQLKKVFEKGDILVDTGNAHF-KDQGRRAQQL-EAAGLRFLG 126 (478)
T ss_dssp HHHHHHHHHHHHCCTTCEEEECCCCCH-HHHHHHHHHH-HTTTCEEEE
T ss_pred HHHHHHHHHHhhCCCCCEEEECCCCCh-HHHHHHHHHH-HHCCCeEEE
Confidence 677777765542 22 23344455653 3334444544 455766653
No 137
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=96.97 E-value=0.0012 Score=63.18 Aligned_cols=104 Identities=18% Similarity=0.245 Sum_probs=66.1
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChh-hHHHHH----HH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPP-FAAAAI----LE 118 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~-~v~~~v----~e 118 (340)
+|.|+|. |++|+.+++.+..+|++++ ..|+.. +...|...+.+++++.. ..|++++++|.. ....++ ..
T Consensus 166 ~vgIIG~-G~iG~~vA~~l~~~G~~V~-~~dr~~--~~~~g~~~~~~l~ell~--~aDvVil~vP~~~~t~~li~~~~l~ 239 (333)
T 3ba1_A 166 RVGIIGL-GRIGLAVAERAEAFDCPIS-YFSRSK--KPNTNYTYYGSVVELAS--NSDILVVACPLTPETTHIINREVID 239 (333)
T ss_dssp CEEEECC-SHHHHHHHHHHHTTTCCEE-EECSSC--CTTCCSEEESCHHHHHH--TCSEEEECSCCCGGGTTCBCHHHHH
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCEEE-EECCCc--hhccCceecCCHHHHHh--cCCEEEEecCCChHHHHHhhHHHHh
Confidence 4566699 9999999999999999865 677665 33346667789999876 489999999974 333333 12
Q ss_pred HHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEc
Q 019500 119 AMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (340)
Q Consensus 119 a~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviG 156 (340)
..+.|. .++..+.|.. .+.+++.+++ ++.+++-.|
T Consensus 240 ~mk~ga-ilIn~srG~~-vd~~aL~~aL-~~g~i~ga~ 274 (333)
T 3ba1_A 240 ALGPKG-VLINIGRGPH-VDEPELVSAL-VEGRLGGAG 274 (333)
T ss_dssp HHCTTC-EEEECSCGGG-BCHHHHHHHH-HHTSSCEEE
T ss_pred cCCCCC-EEEECCCCch-hCHHHHHHHH-HcCCCeEEE
Confidence 233332 3455555543 3334455554 444444333
No 138
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=96.97 E-value=0.00067 Score=61.54 Aligned_cols=87 Identities=17% Similarity=0.165 Sum_probs=60.8
Q ss_pred EEEEeCCCCCcchHHHHHHHHcC-CeEEEeeCCCCCC-cee---cCcccccCHHHhhccCCCcEEEEecChhhHHHHHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYG-TKMVGGVTPKKGG-TEH---LGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILE 118 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G-~~vv~~VnP~~~g-~~i---~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e 118 (340)
+|.|+|+ |+||..+.+.|.+.| +++. .+|++... +.+ .|+.++.+..++. +.|++++++|+..+.+++++
T Consensus 2 ~i~iiG~-G~mG~~~a~~l~~~g~~~v~-~~~r~~~~~~~~~~~~g~~~~~~~~~~~---~~D~vi~~v~~~~~~~v~~~ 76 (263)
T 1yqg_A 2 NVYFLGG-GNMAAAVAGGLVKQGGYRIY-IANRGAEKRERLEKELGVETSATLPELH---SDDVLILAVKPQDMEAACKN 76 (263)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHCSCEEE-EECSSHHHHHHHHHHTCCEEESSCCCCC---TTSEEEECSCHHHHHHHHTT
T ss_pred EEEEECc-hHHHHHHHHHHHHCCCCeEE-EECCCHHHHHHHHHhcCCEEeCCHHHHh---cCCEEEEEeCchhHHHHHHH
Confidence 5777898 999999999999889 7754 66765310 111 3777777776655 38999999999888888765
Q ss_pred HHHcCCcEEEEecCCCCh
Q 019500 119 AMEAELDLVVCITEGIPQ 136 (340)
Q Consensus 119 a~~~Gvk~vvi~t~Gf~e 136 (340)
... .-+.++-+++|++.
T Consensus 77 l~~-~~~ivv~~~~g~~~ 93 (263)
T 1yqg_A 77 IRT-NGALVLSVAAGLSV 93 (263)
T ss_dssp CCC-TTCEEEECCTTCCH
T ss_pred hcc-CCCEEEEecCCCCH
Confidence 543 31234444578875
No 139
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.93 E-value=0.00018 Score=70.77 Aligned_cols=87 Identities=14% Similarity=0.060 Sum_probs=64.2
Q ss_pred cCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeC--CCCCCceecCcccccCHHHhhc--cCCCcEEEEecChhhHHHH
Q 019500 40 DKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVT--PKKGGTEHLGLPVFNTVAEAKA--ETKANASAIYVPPPFAAAA 115 (340)
Q Consensus 40 p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~Vn--P~~~g~~i~G~p~y~sl~dip~--~~~vDlavi~vp~~~v~~~ 115 (340)
.+..+|+|+|| |..|+.+++.+.+.|+++++.+| |...|..+.|+|+|.. +++++ ..+++.+++++ ....++
T Consensus 50 ~~~~~v~IiGA-G~~G~~l~~~l~~~g~~ivgfiDdd~~~~g~~i~GipV~~~-~~l~~~~~~~~~~viiai--~~r~~i 125 (409)
T 2py6_A 50 GNATRLVILGT-KGFGAHLMNVRHERPCEVIAAVDDFRYHSGELYYGLPIIST-DRFTELATHDRDLVALNT--CRYDGP 125 (409)
T ss_dssp GGGCEEEEECS-SSTHHHHHSCSSSCSSEEEEEECTTTTTSCCEETTEEEECH-HHHHHHHHTCTTEEEEEC--CCSHHH
T ss_pred CCCCeEEEEeC-CHHHHHHHHHHHHCCCEEEEEEeCCcccccCEECCEEEECH-HHHHHHHhCCCCEEEEec--cHHHHH
Confidence 45567899999 88999999877777899888877 5555678999999974 44443 34678888888 344677
Q ss_pred HHHHHHcCCcEEEEe
Q 019500 116 ILEAMEAELDLVVCI 130 (340)
Q Consensus 116 v~ea~~~Gvk~vvi~ 130 (340)
++.+.+.|++.+|.+
T Consensus 126 ~~~l~~~g~~~il~f 140 (409)
T 2py6_A 126 KRFFDQICRTHGIPH 140 (409)
T ss_dssp HHHHHHHHHHTTCCE
T ss_pred HHHHHhcCCCEEEec
Confidence 777777776654444
No 140
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=96.93 E-value=0.00085 Score=60.74 Aligned_cols=91 Identities=19% Similarity=0.238 Sum_probs=63.7
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCC----eEEEeeCCCCCC-ce---ecCcccccCHHHhhccCCCcEEEEecChhhHHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGT----KMVGGVTPKKGG-TE---HLGLPVFNTVAEAKAETKANASAIYVPPPFAAAA 115 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~----~vv~~VnP~~~g-~~---i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~ 115 (340)
+|.|+|+ |+||..+.+.|.+.|+ ++. ..|++... +. -.|+..+.+..++.+ +.|++++++|++.+.++
T Consensus 4 ~i~iIG~-G~mG~~~a~~l~~~g~~~~~~V~-~~~r~~~~~~~~~~~~g~~~~~~~~e~~~--~aDvVilav~~~~~~~v 79 (247)
T 3gt0_A 4 QIGFIGC-GNMGMAMIGGMINKNIVSSNQII-CSDLNTANLKNASEKYGLTTTTDNNEVAK--NADILILSIKPDLYASI 79 (247)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTSSCGGGEE-EECSCHHHHHHHHHHHCCEECSCHHHHHH--HCSEEEECSCTTTHHHH
T ss_pred eEEEECc-cHHHHHHHHHHHhCCCCCCCeEE-EEeCCHHHHHHHHHHhCCEEeCChHHHHH--hCCEEEEEeCHHHHHHH
Confidence 4667798 9999999999999997 644 66765410 11 248888889988776 48999999999999998
Q ss_pred HHHHHHc-CCc-EEEEecCCCChhh
Q 019500 116 ILEAMEA-ELD-LVVCITEGIPQHD 138 (340)
Q Consensus 116 v~ea~~~-Gvk-~vvi~t~Gf~e~~ 138 (340)
+++.... .-. .++-.++|++.+.
T Consensus 80 ~~~l~~~l~~~~~vvs~~~gi~~~~ 104 (247)
T 3gt0_A 80 INEIKEIIKNDAIIVTIAAGKSIES 104 (247)
T ss_dssp C---CCSSCTTCEEEECSCCSCHHH
T ss_pred HHHHHhhcCCCCEEEEecCCCCHHH
Confidence 8776532 112 3344678887543
No 141
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=96.91 E-value=0.0023 Score=61.33 Aligned_cols=86 Identities=16% Similarity=0.173 Sum_probs=60.1
Q ss_pred eEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCCCc---------ee-------------cCcccccCHHHhhccCC
Q 019500 43 TRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGT---------EH-------------LGLPVFNTVAEAKAETK 99 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~g~---------~i-------------~G~p~y~sl~dip~~~~ 99 (340)
++|.|+|+ |.+|+.+++.|.+. ++++++..+...... ++ .++++..+.+++.. +
T Consensus 2 ikVgIiGa-G~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~--~ 78 (337)
T 1cf2_P 2 KAVAINGY-GTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLD--E 78 (337)
T ss_dssp EEEEEECC-STTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHH--T
T ss_pred eEEEEEeE-CHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhc--C
Confidence 57889999 99999999999874 678775544331000 01 11222234555554 5
Q ss_pred CcEEEEecChhhHHHHHHHHHHcCCcEEEEecC
Q 019500 100 ANASAIYVPPPFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 100 vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
+|+++.|+|.....+.++.++++|++ ++..++
T Consensus 79 vDvV~~atp~~~~~~~a~~~l~aG~~-VId~sp 110 (337)
T 1cf2_P 79 ADIVIDCTPEGIGAKNLKMYKEKGIK-AIFQGG 110 (337)
T ss_dssp CSEEEECCSTTHHHHHHHHHHHHTCC-EEECTT
T ss_pred CCEEEECCCchhhHHHHHHHHHcCCE-EEEecC
Confidence 99999999999999999999999987 343443
No 142
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=96.91 E-value=0.0044 Score=61.46 Aligned_cols=110 Identities=17% Similarity=0.177 Sum_probs=71.9
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCcee-----------------------cCcccccCHHHhhccC
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH-----------------------LGLPVFNTVAEAKAET 98 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i-----------------------~G~p~y~sl~dip~~~ 98 (340)
..+|.|+|+ |.+|...+..|.+ |++++ .+|.+. +.+ .++....++++...
T Consensus 36 ~mkIaVIGl-G~mG~~lA~~La~-G~~V~-~~D~~~--~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~-- 108 (432)
T 3pid_A 36 FMKITISGT-GYVGLSNGVLIAQ-NHEVV-ALDIVQ--AKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYR-- 108 (432)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHT-TSEEE-EECSCH--HHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHT--
T ss_pred CCEEEEECc-CHHHHHHHHHHHc-CCeEE-EEecCH--HHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHh--
Confidence 346778899 9999998888887 99865 555443 111 13445567766665
Q ss_pred CCcEEEEecChh-----------hHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCCC
Q 019500 99 KANASAIYVPPP-----------FAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCP 160 (340)
Q Consensus 99 ~vDlavi~vp~~-----------~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc~ 160 (340)
+.|++++++|.. .+.++++...+..-..+|+..+..+....+++.+.+ .+.++.. .|..+
T Consensus 109 ~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~l~~g~iVV~~STv~pgtt~~l~~~l-~~~~v~~-sPe~~ 179 (432)
T 3pid_A 109 NADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTEINPNAVMIIKSTIPVGFTRDIKERL-GIDNVIF-SPEFL 179 (432)
T ss_dssp TCSEEEECCCCEEETTTTEEECHHHHHHHHHHHHHCTTSEEEECSCCCTTHHHHHHHHH-TCCCEEE-CCCCC
T ss_pred CCCEEEEeCCCccccccccccHHHHHHHHHHHHhcCCCcEEEEeCCCChHHHHHHHHHH-hhccEee-cCccC
Confidence 589999999986 466666665554334466677777766566666655 4455543 56654
No 143
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=96.90 E-value=0.0012 Score=61.08 Aligned_cols=88 Identities=14% Similarity=0.202 Sum_probs=60.6
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee--cCcccccCHHHhhccCCCcEEEEecChhhHHHHHHHH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH--LGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEA 119 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i--~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ea 119 (340)
.+|.|+|++|++|..+++.|.+.|++++ .+|++... +.. .|+.+. +..+..+ +.|++++++|+..+.+++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~-~~~r~~~~~~~~~~~g~~~~-~~~~~~~--~aDvVi~av~~~~~~~v~~~l 87 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLA-AIEIAPEGRDRLQGMGIPLT-DGDGWID--EADVVVLALPDNIIEKVAEDI 87 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEE-EECCSHHHHHHHHHTTCCCC-CSSGGGG--TCSEEEECSCHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEE-EEECCHHHHHHHHhcCCCcC-CHHHHhc--CCCEEEEcCCchHHHHHHHHH
Confidence 4788889999999999999999999865 67765310 111 354443 5555554 589999999999998888776
Q ss_pred HHc-CCc-EEEEecCCC
Q 019500 120 MEA-ELD-LVVCITEGI 134 (340)
Q Consensus 120 ~~~-Gvk-~vvi~t~Gf 134 (340)
... .-. .++..++|.
T Consensus 88 ~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 88 VPRVRPGTIVLILDAAA 104 (286)
T ss_dssp GGGSCTTCEEEESCSHH
T ss_pred HHhCCCCCEEEECCCCc
Confidence 543 222 333345555
No 144
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=96.85 E-value=0.0017 Score=62.60 Aligned_cols=92 Identities=15% Similarity=0.083 Sum_probs=63.2
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ce----------ec------CcccccCHHHhhccCCCcEEE
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE----------HL------GLPVFNTVAEAKAETKANASA 104 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~----------i~------G~p~y~sl~dip~~~~vDlav 104 (340)
..+|.|+|+ |.+|..++..|.+.|+++. .++++..- +. .. ++.+..++++..+ +.|+++
T Consensus 29 ~mkI~VIGa-G~mG~alA~~La~~G~~V~-l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~--~aDvVi 104 (356)
T 3k96_A 29 KHPIAILGA-GSWGTALALVLARKGQKVR-LWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLE--GVTDIL 104 (356)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHTTTCCEE-EECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHT--TCCEEE
T ss_pred CCeEEEECc-cHHHHHHHHHHHHCCCeEE-EEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHh--cCCEEE
Confidence 346777799 9999999999999998854 44443200 00 01 2344567877665 589999
Q ss_pred EecChhhHHHHHHHHHHc-C-CcEEEEecCCCChh
Q 019500 105 IYVPPPFAAAAILEAMEA-E-LDLVVCITEGIPQH 137 (340)
Q Consensus 105 i~vp~~~v~~~v~ea~~~-G-vk~vvi~t~Gf~e~ 137 (340)
+++|+..+.+++++.... . -..++.++.|+...
T Consensus 105 laVp~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~ 139 (356)
T 3k96_A 105 IVVPSFAFHEVITRMKPLIDAKTRIAWGTKGLAKG 139 (356)
T ss_dssp ECCCHHHHHHHHHHHGGGCCTTCEEEECCCSCBTT
T ss_pred ECCCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCcC
Confidence 999999998888877643 1 12456677888654
No 145
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=96.81 E-value=0.02 Score=55.93 Aligned_cols=123 Identities=15% Similarity=0.247 Sum_probs=88.0
Q ss_pred CCCcEEEEecChHHHHHHHHHHHhCCCCceEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEccCCCc--HHHHHHH
Q 019500 179 KPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEIGGTA--EEDAAAL 256 (340)
Q Consensus 179 ~~G~valvSQSG~l~~~~~~~~~~~giG~S~~vs~Gn~a~~dv~~~d~l~~l~~Dp~T~~I~ly~E~~g~~--~~~~~~f 256 (340)
..|+|++++-+|+++...+|.....|.-...++-+|+.+ +.-.+.+.++.+..||+.++|++.+=+ |-. ..-+...
T Consensus 255 l~G~Ig~~~nGaGl~m~t~D~i~~~Gg~~aNflD~gG~a-~~~~~~~~~~~il~d~~v~~ilvni~g-gi~~~~~vA~gi 332 (388)
T 2nu8_B 255 LDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGA-TKERVTEAFKIILSDDKVKAVLVNIFG-GIVRCDLIADGI 332 (388)
T ss_dssp CSSSEEEEESSHHHHHHHHHHHHHTTCCBCEEEECCSCC-CHHHHHHHHHHHHTSTTCCEEEEEEES-CSSCHHHHHHHH
T ss_pred CCCEEEEEeCCCchhhhhhHHHHHcCCCcCceeEecCCC-CHHHHHHHHHHHhcCCCCCEEEEEecC-CcCCchHHHHHH
Confidence 479999999999999999999999998788899998876 244567778888899999999997521 211 1122333
Q ss_pred HHHhC---CCCCEEEEEeCCCCCCCCcccccCcccccccccceecCCCCcHHHHHHHHHHcCCeec--CCHHHHHHHHHH
Q 019500 257 IKESG---TEKPIVAFIAGLTAPPGRRMGHAGVDVYTIFGSAIVSGGKGTAQDKIKTLREAGVTVV--ESPAKIGAAMLE 331 (340)
Q Consensus 257 ~~a~r---~~KPVvvlk~Grs~~~g~~~sHtg~~~~~~~~~ala~~~~g~~~~~~a~~~qaGvv~v--~~~~el~~~~~~ 331 (340)
+++++ .+||||+-..|. +.+.-...|++.|+-.. +|+++-...+.+
T Consensus 333 i~a~~~~~~~~pivvrl~G~-----------------------------n~~~g~~~l~~~g~~~~~~~~~~~aa~~~v~ 383 (388)
T 2nu8_B 333 IGAVAEVGVNVPVVVRLEGN-----------------------------NAELGAKKLADSGLNIIAAKGLTDAAQQVVA 383 (388)
T ss_dssp HHHHHHHTCCSCEEEEEEST-----------------------------THHHHHHHHHTTCSSEEECSSHHHHHHHHHH
T ss_pred HHHHHhcCCCCeEEEEeCCC-----------------------------CHHHHHHHHHHCCCceecCCCHHHHHHHHHH
Confidence 44433 689999854442 23344567888887666 788777666554
Q ss_pred H
Q 019500 332 V 332 (340)
Q Consensus 332 ~ 332 (340)
+
T Consensus 384 ~ 384 (388)
T 2nu8_B 384 A 384 (388)
T ss_dssp H
T ss_pred H
Confidence 3
No 146
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=96.80 E-value=0.0035 Score=60.25 Aligned_cols=98 Identities=14% Similarity=0.177 Sum_probs=53.9
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecCh-hhHHHHH-HHH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPP-PFAAAAI-LEA 119 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~-~~v~~~v-~ea 119 (340)
..+|.|+|. |++|+.+++.+..+|++++ ..||.. ....+...+.+++++.+ ..|++++++|. ..+..++ ++.
T Consensus 171 gktiGIIGl-G~IG~~vA~~l~~~G~~V~-~~dr~~--~~~~~~~~~~sl~ell~--~aDvVil~vP~t~~t~~li~~~~ 244 (340)
T 4dgs_A 171 GKRIGVLGL-GQIGRALASRAEAFGMSVR-YWNRST--LSGVDWIAHQSPVDLAR--DSDVLAVCVAASAATQNIVDASL 244 (340)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHTTTCEEE-EECSSC--CTTSCCEECSSHHHHHH--TCSEEEECC----------CHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEE-EEcCCc--ccccCceecCCHHHHHh--cCCEEEEeCCCCHHHHHHhhHHH
Confidence 345667799 9999999999999999866 677765 23344556789999987 58999999994 3344444 222
Q ss_pred HH-cCCc-EEEEecCCCChhhHHHHHHHH
Q 019500 120 ME-AELD-LVVCITEGIPQHDMVRVKAAL 146 (340)
Q Consensus 120 ~~-~Gvk-~vvi~t~Gf~e~~~~~l~~~a 146 (340)
.+ .+-. .+|..+.|- -.+.+.+.+++
T Consensus 245 l~~mk~gailIN~aRG~-vvde~aL~~aL 272 (340)
T 4dgs_A 245 LQALGPEGIVVNVARGN-VVDEDALIEAL 272 (340)
T ss_dssp HHHTTTTCEEEECSCC-------------
T ss_pred HhcCCCCCEEEECCCCc-ccCHHHHHHHH
Confidence 22 2222 334455553 23334455544
No 147
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=96.80 E-value=0.0052 Score=59.63 Aligned_cols=89 Identities=9% Similarity=-0.027 Sum_probs=59.4
Q ss_pred eEEEEeCCCCCcchHHHH-HHHHcCCe--EEEeeCCCCCCceec---C--ccccc--CHHHhhccCCCcEEEEecChhhH
Q 019500 43 TRVICQGITGKNGTFHTE-QAIEYGTK--MVGGVTPKKGGTEHL---G--LPVFN--TVAEAKAETKANASAIYVPPPFA 112 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~-~l~~~G~~--vv~~VnP~~~g~~i~---G--~p~y~--sl~dip~~~~vDlavi~vp~~~v 112 (340)
++|.|+||+|..|+.+++ .+.+.++. -++.+..+..|+.+. | +++.. +.+++ . ++|+++.|+|....
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~~v~~~~g~~i~~~~~~~~~~~-~--~~DvVf~a~g~~~s 78 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEAL-K--ALDIIVTCQGGDYT 78 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHHHH-H--TCSEEEECSCHHHH
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCCCccccCCCceEEEecCChHHh-c--CCCEEEECCCchhH
Confidence 578888999999999999 56555542 222443333344432 3 22322 24444 2 59999999999999
Q ss_pred HHHHHHHHHcCCcEEEE-ecCCC
Q 019500 113 AAAILEAMEAELDLVVC-ITEGI 134 (340)
Q Consensus 113 ~~~v~ea~~~Gvk~vvi-~t~Gf 134 (340)
.+.+..+.+.|+|.+|| .++.|
T Consensus 79 ~~~a~~~~~~G~k~vVID~ss~~ 101 (367)
T 1t4b_A 79 NEIYPKLRESGWQGYWIDAASSL 101 (367)
T ss_dssp HHHHHHHHHTTCCCEEEECSSTT
T ss_pred HHHHHHHHHCCCCEEEEcCChhh
Confidence 99999999999965443 34444
No 148
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=96.76 E-value=0.003 Score=61.10 Aligned_cols=92 Identities=9% Similarity=-0.063 Sum_probs=66.4
Q ss_pred cCCeEEEEeCCCCCcchHHHHHHHHcC-CeEEEeeCCCCCCceecC----------------ccccc-CHHHhhccCCCc
Q 019500 40 DKNTRVICQGITGKNGTFHTEQAIEYG-TKMVGGVTPKKGGTEHLG----------------LPVFN-TVAEAKAETKAN 101 (340)
Q Consensus 40 p~~iaViVvGasgk~G~~v~~~l~~~G-~~vv~~VnP~~~g~~i~G----------------~p~y~-sl~dip~~~~vD 101 (340)
.+.++|.|+|+||-.|..+.+.|.++. +++.+...++..|+.+.. +++.. +.+++ .++|
T Consensus 5 ~~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~~---~~vD 81 (359)
T 4dpl_A 5 RRTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKLM---DDVD 81 (359)
T ss_dssp -CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGGC---TTCC
T ss_pred CCCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHHh---cCCC
Confidence 456899999999999999999887764 466656666665554421 11111 12222 2599
Q ss_pred EEEEecChhhHHHHHHHHHHcCCcEEEEecCCCC
Q 019500 102 ASAIYVPPPFAAAAILEAMEAELDLVVCITEGIP 135 (340)
Q Consensus 102 lavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~Gf~ 135 (340)
+++.|+|.....+.+.++.++|++. |.+|+-|.
T Consensus 82 vvf~a~p~~~s~~~a~~~~~~G~~v-IDlSa~~R 114 (359)
T 4dpl_A 82 IIFSPLPQGAAGPVEEQFAKEGFPV-ISNSPDHR 114 (359)
T ss_dssp EEEECCCTTTHHHHHHHHHHTTCEE-EECSSTTT
T ss_pred EEEECCChHHHHHHHHHHHHCCCEE-EEcCCCcc
Confidence 9999999999999999999999986 56787663
No 149
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=96.76 E-value=0.003 Score=61.10 Aligned_cols=92 Identities=9% Similarity=-0.063 Sum_probs=66.4
Q ss_pred cCCeEEEEeCCCCCcchHHHHHHHHcC-CeEEEeeCCCCCCceecC----------------ccccc-CHHHhhccCCCc
Q 019500 40 DKNTRVICQGITGKNGTFHTEQAIEYG-TKMVGGVTPKKGGTEHLG----------------LPVFN-TVAEAKAETKAN 101 (340)
Q Consensus 40 p~~iaViVvGasgk~G~~v~~~l~~~G-~~vv~~VnP~~~g~~i~G----------------~p~y~-sl~dip~~~~vD 101 (340)
.+.++|.|+|+||-.|..+.+.|.++. +++.+...++..|+.+.. +++.. +.+++ .++|
T Consensus 5 ~~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~~---~~vD 81 (359)
T 4dpk_A 5 RRTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKLM---DDVD 81 (359)
T ss_dssp -CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGGC---TTCC
T ss_pred CCCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHHh---cCCC
Confidence 456899999999999999999887764 466656666665554421 11111 12222 2599
Q ss_pred EEEEecChhhHHHHHHHHHHcCCcEEEEecCCCC
Q 019500 102 ASAIYVPPPFAAAAILEAMEAELDLVVCITEGIP 135 (340)
Q Consensus 102 lavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~Gf~ 135 (340)
+++.|+|.....+.+.++.++|++. |.+|+-|.
T Consensus 82 vvf~a~p~~~s~~~a~~~~~~G~~v-IDlSa~~R 114 (359)
T 4dpk_A 82 IIFSPLPQGAAGPVEEQFAKEGFPV-ISNSPDHR 114 (359)
T ss_dssp EEEECCCTTTHHHHHHHHHHTTCEE-EECSSTTT
T ss_pred EEEECCChHHHHHHHHHHHHCCCEE-EEcCCCcc
Confidence 9999999999999999999999986 56787663
No 150
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=96.74 E-value=0.0017 Score=60.75 Aligned_cols=87 Identities=14% Similarity=0.127 Sum_probs=58.4
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCC--CCCC-cee--c------C-----ccccc--CHHHhhccCCCcEEEE
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTP--KKGG-TEH--L------G-----LPVFN--TVAEAKAETKANASAI 105 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP--~~~g-~~i--~------G-----~p~y~--sl~dip~~~~vDlavi 105 (340)
+|.|+|+ |.+|..++..|.+.|+++. .+++ +... +.+ . | +.+.. ++++..+ +.|++++
T Consensus 2 ~I~iiG~-G~mG~~~a~~L~~~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~D~vi~ 77 (335)
T 1txg_A 2 IVSILGA-GAMGSALSVPLVDNGNEVR-IWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLE--NAEVVLL 77 (335)
T ss_dssp EEEEESC-CHHHHHHHHHHHHHCCEEE-EECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHT--TCSEEEE
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCeEE-EEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHh--cCCEEEE
Confidence 5777899 9999999999999999855 5665 3200 011 1 2 13444 6766554 5899999
Q ss_pred ecChhhHHHHHHHHHHcCC-cEEEEecCCC
Q 019500 106 YVPPPFAAAAILEAMEAEL-DLVVCITEGI 134 (340)
Q Consensus 106 ~vp~~~v~~~v~ea~~~Gv-k~vvi~t~Gf 134 (340)
++|+..+.+++++....+- +.++.++.|+
T Consensus 78 ~v~~~~~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 78 GVSTDGVLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp CSCGGGHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred cCChHHHHHHHHHHhcCCCCCEEEEEcCcC
Confidence 9999999888877654111 2344455587
No 151
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=96.74 E-value=0.0017 Score=62.41 Aligned_cols=86 Identities=16% Similarity=0.125 Sum_probs=62.5
Q ss_pred eEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCC-CCC--------cee-------------------cC--ccccc--
Q 019500 43 TRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPK-KGG--------TEH-------------------LG--LPVFN-- 89 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~-~~g--------~~i-------------------~G--~p~y~-- 89 (340)
++|.|+|+ |++|+.+++.+.+. ++++++..+|. ... +++ .| ++++.
T Consensus 4 ikVgI~G~-GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 82 (337)
T 3e5r_O 4 IKIGINGF-GRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGIR 82 (337)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEECCS
T ss_pred eEEEEECc-CHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEecC
Confidence 68899999 99999999998876 67888665551 000 011 11 23353
Q ss_pred CHHHhh-ccCCCcEEEEecChhhHHHHHHHHHHcCCcEEEE
Q 019500 90 TVAEAK-AETKANASAIYVPPPFAAAAILEAMEAELDLVVC 129 (340)
Q Consensus 90 sl~dip-~~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi 129 (340)
+.++++ .+.++|+++.|+|.....+.+..++++|+|.+||
T Consensus 83 dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVI 123 (337)
T 3e5r_O 83 NPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVI 123 (337)
T ss_dssp CGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEE
T ss_pred ChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEE
Confidence 677764 1125999999999999999999999999987554
No 152
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=96.71 E-value=0.0048 Score=60.15 Aligned_cols=116 Identities=14% Similarity=0.132 Sum_probs=73.7
Q ss_pred cCCeEEEEeCCCCCcchHHHH-HHHHcCC---eEEEeeCCCCCCcee---cCcc-ccc---CHHHhhccCCCcEEEEecC
Q 019500 40 DKNTRVICQGITGKNGTFHTE-QAIEYGT---KMVGGVTPKKGGTEH---LGLP-VFN---TVAEAKAETKANASAIYVP 108 (340)
Q Consensus 40 p~~iaViVvGasgk~G~~v~~-~l~~~G~---~vv~~VnP~~~g~~i---~G~p-~y~---sl~dip~~~~vDlavi~vp 108 (340)
|.+++|.|+||||-.|..+++ .|.++.| +++ .+..+..|+.+ .|.. .+. +.+++. ++|+++.|+|
T Consensus 2 ~~~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~-~~ss~~aG~~~~~~~~~~~~v~~~~~~~~~~---~vDvvf~a~~ 77 (377)
T 3uw3_A 2 PGSMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPV-FFSTSNAGGKAPSFAKNETTLKDATSIDDLK---KCDVIITCQG 77 (377)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEE-EEESSCTTSBCCTTCCSCCBCEETTCHHHHH---TCSEEEECSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhhCCCCceEEE-EEechhcCCCHHHcCCCceEEEeCCChhHhc---CCCEEEECCC
Confidence 346788899999999999998 7777654 455 33333444443 2211 122 233432 5999999999
Q ss_pred hhhHHHHHHHHHHcCCc-EEEEecCCCChh-h---------HHHHHHHHhccCCc-EEEccCCCC
Q 019500 109 PPFAAAAILEAMEAELD-LVVCITEGIPQH-D---------MVRVKAALNNQSKT-RLVGPNCPG 161 (340)
Q Consensus 109 ~~~v~~~v~ea~~~Gvk-~vvi~t~Gf~e~-~---------~~~l~~~aar~~gi-rviGPNc~G 161 (340)
.....+.+..+.++|+| .+|-.++.|.-+ + .+.+.. + ++.++ .|..|||.-
T Consensus 78 ~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~-~-~~~~i~~Ianp~C~t 140 (377)
T 3uw3_A 78 GDYTNDVFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVIKD-A-LVNGTKNFIGGNCTV 140 (377)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHHHHHHHHH-H-HHTTCCEEEECCHHH
T ss_pred hHHHHHHHHHHHHCCCCEEEEeCCcccccCCCCceECCcCCHHHHhh-h-hhcCCcEEEcCCHHH
Confidence 99999999999999985 555555555321 1 122321 1 23565 477999853
No 153
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=96.70 E-value=0.0017 Score=61.96 Aligned_cols=87 Identities=22% Similarity=0.254 Sum_probs=60.7
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC--c--eecCcccccCHHHhhccCCCcEEEEecChhhHHHHHH-H
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG--T--EHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAIL-E 118 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g--~--~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~-e 118 (340)
+|.|+|+ |.+|+.+++.|.+.|++++ ..+++... + .-.|+.++ +++++.. +.|++++++|+....++++ +
T Consensus 18 ~I~IIG~-G~mG~alA~~L~~~G~~V~-~~~~~~~~~~~~a~~~G~~~~-~~~e~~~--~aDvVilavp~~~~~~v~~~~ 92 (338)
T 1np3_A 18 KVAIIGY-GSQGHAHACNLKDSGVDVT-VGLRSGSATVAKAEAHGLKVA-DVKTAVA--AADVVMILTPDEFQGRLYKEE 92 (338)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCEE-EECCTTCHHHHHHHHTTCEEE-CHHHHHH--TCSEEEECSCHHHHHHHHHHH
T ss_pred EEEEECc-hHHHHHHHHHHHHCcCEEE-EEECChHHHHHHHHHCCCEEc-cHHHHHh--cCCEEEEeCCcHHHHHHHHHH
Confidence 4566698 9999999999999999865 56655410 0 12466666 8877765 5899999999999988887 5
Q ss_pred HHHc-CCcEEEEecCCCC
Q 019500 119 AMEA-ELDLVVCITEGIP 135 (340)
Q Consensus 119 a~~~-Gvk~vvi~t~Gf~ 135 (340)
.... .-..+++..+|+.
T Consensus 93 i~~~l~~~~ivi~~~gv~ 110 (338)
T 1np3_A 93 IEPNLKKGATLAFAHGFS 110 (338)
T ss_dssp TGGGCCTTCEEEESCCHH
T ss_pred HHhhCCCCCEEEEcCCch
Confidence 4332 2234555666653
No 154
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=96.69 E-value=0.0033 Score=60.80 Aligned_cols=90 Identities=16% Similarity=0.112 Sum_probs=63.1
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcC-CeEEEeeCCCCCCceec-------Cc---c-cccCHHHhhccCCCcEEEEecC
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYG-TKMVGGVTPKKGGTEHL-------GL---P-VFNTVAEAKAETKANASAIYVP 108 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G-~~vv~~VnP~~~g~~i~-------G~---p-~y~sl~dip~~~~vDlavi~vp 108 (340)
++++|.|+|++|..|+.+++.|.+.. +++++..++...|..+. |. . .+.+ ++... ++|+++.|+|
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~--~vDvVf~atp 91 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFS--TVDAVFCCLP 91 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGG--GCSEEEECCC
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhc--CCCEEEEcCC
Confidence 34789999999999999999998864 57776656543333221 11 0 0111 22222 5899999999
Q ss_pred hhhHHHHHHHHHHcCCcEEEEecCCCC
Q 019500 109 PPFAAAAILEAMEAELDLVVCITEGIP 135 (340)
Q Consensus 109 ~~~v~~~v~ea~~~Gvk~vvi~t~Gf~ 135 (340)
.....+.+..+ ++|++ +|-.++-|.
T Consensus 92 ~~~s~~~a~~~-~aG~~-VId~sa~~R 116 (359)
T 1xyg_A 92 HGTTQEIIKEL-PTALK-IVDLSADFR 116 (359)
T ss_dssp TTTHHHHHHTS-CTTCE-EEECSSTTT
T ss_pred chhHHHHHHHH-hCCCE-EEECCcccc
Confidence 99999999999 99987 466777664
No 155
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=96.67 E-value=0.0024 Score=55.87 Aligned_cols=88 Identities=15% Similarity=0.111 Sum_probs=60.5
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee---cC-------cccccCHHHhhccCCCcEEEEecChhhH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH---LG-------LPVFNTVAEAKAETKANASAIYVPPPFA 112 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i---~G-------~p~y~sl~dip~~~~vDlavi~vp~~~v 112 (340)
+|.|+|++|.+|+.+++.|.+.|+++. .++++... +.+ .| +. +.++++..+ +.|++++++|+..+
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~D~Vi~~~~~~~~ 77 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIV-VGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAE--ACDIAVLTIPWEHA 77 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEE-EEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHH--HCSEEEECSCHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHh--cCCEEEEeCChhhH
Confidence 577889779999999999999999855 55554310 111 12 33 456777665 48999999999998
Q ss_pred HHHHHHHHHc-CCcEEEEecCCCC
Q 019500 113 AAAILEAMEA-ELDLVVCITEGIP 135 (340)
Q Consensus 113 ~~~v~ea~~~-Gvk~vvi~t~Gf~ 135 (340)
.+++++..+. .-+.++.+++|++
T Consensus 78 ~~~~~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 78 IDTARDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp HHHHHHTHHHHTTSEEEECCCCEE
T ss_pred HHHHHHHHHHcCCCEEEEcCCCcC
Confidence 8888765431 2245666777876
No 156
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=96.65 E-value=0.0023 Score=58.02 Aligned_cols=89 Identities=16% Similarity=0.120 Sum_probs=59.8
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC---------------ce---ecCcccccCHHHhhccCCCcE
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG---------------TE---HLGLPVFNTVAEAKAETKANA 102 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g---------------~~---i~G~p~y~sl~dip~~~~vDl 102 (340)
...+|.|+|+ |+||+.++++|.+.|++++ ..|++... .+ -.|...+.++.++.+ ..|+
T Consensus 18 ~~~kIgiIG~-G~mG~alA~~L~~~G~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~--~aDv 93 (245)
T 3dtt_A 18 QGMKIAVLGT-GTVGRTMAGALADLGHEVT-IGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAA--GAEL 93 (245)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHH--HCSE
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCEEE-EEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHh--cCCE
Confidence 3456777798 9999999999999999854 45544310 00 123445667888766 4899
Q ss_pred EEEecChhhHHHHHHHH-HHc-CCcEEEEecCC
Q 019500 103 SAIYVPPPFAAAAILEA-MEA-ELDLVVCITEG 133 (340)
Q Consensus 103 avi~vp~~~v~~~v~ea-~~~-Gvk~vvi~t~G 133 (340)
+++++|+....+++++. ... .=+.++.++.|
T Consensus 94 Vilavp~~~~~~~~~~i~~~~l~g~ivi~~s~~ 126 (245)
T 3dtt_A 94 VVNATEGASSIAALTAAGAENLAGKILVDIANP 126 (245)
T ss_dssp EEECSCGGGHHHHHHHHCHHHHTTSEEEECCCC
T ss_pred EEEccCcHHHHHHHHHhhhhhcCCCEEEECCCC
Confidence 99999999998888765 221 22345555544
No 157
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=96.64 E-value=0.0078 Score=58.72 Aligned_cols=91 Identities=12% Similarity=0.024 Sum_probs=65.0
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcC-CeEEEee-CCCCCCceecCc-c--------------cccCHH---HhhccCCC
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYG-TKMVGGV-TPKKGGTEHLGL-P--------------VFNTVA---EAKAETKA 100 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G-~~vv~~V-nP~~~g~~i~G~-p--------------~y~sl~---dip~~~~v 100 (340)
++++|.|+|+||-.|..+++.|.++. +++.+.. ..+..|+.+..+ | .+.+++ ++ . ++
T Consensus 18 ~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~-~--~~ 94 (381)
T 3hsk_A 18 SVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECKPEGNF-L--EC 94 (381)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESSSCTTG-G--GC
T ss_pred CccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEeCchhhhc-c--cC
Confidence 45789999999999999999888875 4565444 565555554210 0 122121 22 2 48
Q ss_pred cEEEEecChhhHHHHHHHHHHcCCcEEEEecCCCC
Q 019500 101 NASAIYVPPPFAAAAILEAMEAELDLVVCITEGIP 135 (340)
Q Consensus 101 Dlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~Gf~ 135 (340)
|+++.|+|.....+.+.++.++|++. |-.++-|.
T Consensus 95 Dvvf~alp~~~s~~~~~~~~~~G~~V-IDlSa~fR 128 (381)
T 3hsk_A 95 DVVFSGLDADVAGDIEKSFVEAGLAV-VSNAKNYR 128 (381)
T ss_dssp SEEEECCCHHHHHHHHHHHHHTTCEE-EECCSTTT
T ss_pred CEEEECCChhHHHHHHHHHHhCCCEE-EEcCCccc
Confidence 99999999999999999999999985 66787763
No 158
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=96.62 E-value=0.0026 Score=60.75 Aligned_cols=90 Identities=14% Similarity=0.135 Sum_probs=61.5
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee----------------cCcccccCHHHhhccCCCcEEEEe
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH----------------LGLPVFNTVAEAKAETKANASAIY 106 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i----------------~G~p~y~sl~dip~~~~vDlavi~ 106 (340)
+|.|+|+ |.||...+..|.+.|+++. .+|++... +.+ .++.+..++++..+ +.|+++++
T Consensus 17 kI~iIG~-G~mG~~la~~L~~~G~~V~-~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~aDvVila 92 (366)
T 1evy_A 17 KAVVFGS-GAFGTALAMVLSKKCREVC-VWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYN--GAEIILFV 92 (366)
T ss_dssp EEEEECC-SHHHHHHHHHHTTTEEEEE-EECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHT--TCSSEEEC
T ss_pred eEEEECC-CHHHHHHHHHHHhCCCEEE-EEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHc--CCCEEEEC
Confidence 6888899 9999999999998888754 56654200 011 12445567877655 58999999
Q ss_pred cChhhHHHHHHH----HH---Hc-CCcEEEEecCCCChhh
Q 019500 107 VPPPFAAAAILE----AM---EA-ELDLVVCITEGIPQHD 138 (340)
Q Consensus 107 vp~~~v~~~v~e----a~---~~-Gvk~vvi~t~Gf~e~~ 138 (340)
+|+..+.+++++ .. .. +. .++.++.|+..+.
T Consensus 93 v~~~~~~~v~~~~~~gl~~~l~~~~~-ivv~~~~gi~~~~ 131 (366)
T 1evy_A 93 IPTQFLRGFFEKSGGNLIAYAKEKQV-PVLVCTKGIERST 131 (366)
T ss_dssp CCHHHHHHHHHHHCHHHHHHHHHHTC-CEEECCCSCCTTT
T ss_pred CChHHHHHHHHHhHHHHHHhcCccCC-EEEEECCcCCCcc
Confidence 999888888776 43 33 43 3455666886543
No 159
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=96.59 E-value=0.0053 Score=59.02 Aligned_cols=90 Identities=11% Similarity=0.054 Sum_probs=61.4
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcC-CeEEEee-CCCCCCcee---cC-------------cccc-cCHHHhhccCCCcEE
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYG-TKMVGGV-TPKKGGTEH---LG-------------LPVF-NTVAEAKAETKANAS 103 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G-~~vv~~V-nP~~~g~~i---~G-------------~p~y-~sl~dip~~~~vDla 103 (340)
++|.|+|++|..|+.+++.|.+.+ +++++.. ++...|+.+ .+ +.+. .+.+++.+ .++|++
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~DvV 87 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEF-EDVDIV 87 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGG-TTCCEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhc-CCCCEE
Confidence 688999999999999999888764 5676554 354333332 11 1111 13333322 159999
Q ss_pred EEecChhhHHHHHHHHHHcCCcEEEEecCCC
Q 019500 104 AIYVPPPFAAAAILEAMEAELDLVVCITEGI 134 (340)
Q Consensus 104 vi~vp~~~v~~~v~ea~~~Gvk~vvi~t~Gf 134 (340)
++++|.....+.+..+.+.|++ +|-.++-|
T Consensus 88 ~~atp~~~~~~~a~~~~~aG~~-VId~s~~~ 117 (354)
T 1ys4_A 88 FSALPSDLAKKFEPEFAKEGKL-IFSNASAY 117 (354)
T ss_dssp EECCCHHHHHHHHHHHHHTTCE-EEECCSTT
T ss_pred EECCCchHHHHHHHHHHHCCCE-EEECCchh
Confidence 9999999999999999999998 34444444
No 160
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=96.57 E-value=0.0019 Score=61.89 Aligned_cols=90 Identities=16% Similarity=0.141 Sum_probs=64.7
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCC-CCCC--------ce-----------------ecC--cccc--cC
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTP-KKGG--------TE-----------------HLG--LPVF--NT 90 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP-~~~g--------~~-----------------i~G--~p~y--~s 90 (340)
+++|.|+|+ |++|+.+++.+.+. ++++++..+| ...+ ++ +.| ++++ .+
T Consensus 3 ~ikVgI~G~-G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d 81 (335)
T 1u8f_O 3 KVKVGVNGF-GRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERD 81 (335)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS
T ss_pred ceEEEEEcc-CHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCC
Confidence 368899998 99999999998775 6888866555 1100 01 112 2334 36
Q ss_pred HHHhhc-cCCCcEEEEecChhhHHHHHHHHHHcCCcEEEEecCC
Q 019500 91 VAEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVCITEG 133 (340)
Q Consensus 91 l~dip~-~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~G 133 (340)
.++++- +.++|+++.++|.....+.+..++++|++.++ ++..
T Consensus 82 ~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~-iSap 124 (335)
T 1u8f_O 82 PSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVI-ISAP 124 (335)
T ss_dssp GGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEE-ESSC
T ss_pred HHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEE-eccC
Confidence 777751 12699999999999999999999999999855 5654
No 161
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=96.57 E-value=0.011 Score=57.44 Aligned_cols=112 Identities=14% Similarity=0.087 Sum_probs=71.0
Q ss_pred eEEEEeCCCCCcchHHHH-HHHHcCC---eEEEeeCCCCCCcee---cCcc-ccc---CHHHhhccCCCcEEEEecChhh
Q 019500 43 TRVICQGITGKNGTFHTE-QAIEYGT---KMVGGVTPKKGGTEH---LGLP-VFN---TVAEAKAETKANASAIYVPPPF 111 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~-~l~~~G~---~vv~~VnP~~~g~~i---~G~p-~y~---sl~dip~~~~vDlavi~vp~~~ 111 (340)
++|.|+||||-.|...++ .|.++.| ++++.-..+ .|+.+ .|.. .+. +.+++ + ++|+++.|+|...
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~~~~~~~~~~~~~~~~~~~-~--~~Dvvf~a~~~~~ 76 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-IGVPAPNFGKDAGMLHDAFDIESL-K--QLDAVITCQGGSY 76 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCCSSSCCCBCEETTCHHHH-T--TCSEEEECSCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc-cCcCHHHhCCCceEEEecCChhHh-c--cCCEEEECCChHH
Confidence 467888999999999998 7777654 455333333 45443 2211 222 23333 2 5999999999999
Q ss_pred HHHHHHHHHHcCCc-EEEEecCCCChh-h---------HHHHHHHHhccCCc-EEEccCCC
Q 019500 112 AAAAILEAMEAELD-LVVCITEGIPQH-D---------MVRVKAALNNQSKT-RLVGPNCP 160 (340)
Q Consensus 112 v~~~v~ea~~~Gvk-~vvi~t~Gf~e~-~---------~~~l~~~aar~~gi-rviGPNc~ 160 (340)
..+.+..+.++|++ .+|-.++.|.-+ + .+.+.. + ++.++ .|..|||.
T Consensus 77 s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~-~-~~~~i~~Ianp~C~ 135 (370)
T 3pzr_A 77 TEKVYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVNLKQILH-G-IHHGTKTFVGGNCT 135 (370)
T ss_dssp HHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHH-H-HHTTCCEEEECCHH
T ss_pred HHHHHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCCHHHHhh-h-hhcCCcEEEcCChH
Confidence 99999999999985 445555555321 1 122221 1 23565 47799994
No 162
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=96.57 E-value=0.0058 Score=58.99 Aligned_cols=89 Identities=13% Similarity=0.042 Sum_probs=62.4
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcC------CeEEEeeCCCCCCceec-------C---ccccc-CHHHhhccCCCcEEE
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYG------TKMVGGVTPKKGGTEHL-------G---LPVFN-TVAEAKAETKANASA 104 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G------~~vv~~VnP~~~g~~i~-------G---~p~y~-sl~dip~~~~vDlav 104 (340)
+++|.|+||+|..|+.+++.|.+.+ +++++....+..|+.+. + +.+-+ +.+++. ++|+++
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~~~~~---~~DvVf 85 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEAAVLG---GHDAVF 85 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCHHHHT---TCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCHHHhc---CCCEEE
Confidence 4788999999999999999998876 46665554443333221 1 11111 222322 589999
Q ss_pred EecChhhHHHHHHHHHHcCCcEEEEecCCCC
Q 019500 105 IYVPPPFAAAAILEAMEAELDLVVCITEGIP 135 (340)
Q Consensus 105 i~vp~~~v~~~v~ea~~~Gvk~vvi~t~Gf~ 135 (340)
.++|.....+.+..+ +.|++. |.+|+-|.
T Consensus 86 ~alg~~~s~~~~~~~-~~G~~v-IDlSa~~R 114 (352)
T 2nqt_A 86 LALPHGHSAVLAQQL-SPETLI-IDCGADFR 114 (352)
T ss_dssp ECCTTSCCHHHHHHS-CTTSEE-EECSSTTT
T ss_pred ECCCCcchHHHHHHH-hCCCEE-EEECCCcc
Confidence 999999999999999 999864 66787775
No 163
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=96.55 E-value=0.0078 Score=58.10 Aligned_cols=115 Identities=19% Similarity=0.189 Sum_probs=77.1
Q ss_pred cccCcCCeEEEEeCCCCCcchHHHH---HHHHc--CCeEEEeeCCCCCCcee--------cCcccccCHHHhhccCCCcE
Q 019500 36 AVFVDKNTRVICQGITGKNGTFHTE---QAIEY--GTKMVGGVTPKKGGTEH--------LGLPVFNTVAEAKAETKANA 102 (340)
Q Consensus 36 ~lf~p~~iaViVvGasgk~G~~v~~---~l~~~--G~~vv~~VnP~~~g~~i--------~G~p~y~sl~dip~~~~vDl 102 (340)
+.+.. ..+++|.|- |.+|+...| .+.++ ++++++.+ |...|++. .|+|++.|++++.+. .+|+
T Consensus 17 ~~~~~-~~~~vi~~~-g~~g~~~aKta~gllr~~~~~~iVgvi-~~~~Gkd~ge~~~g~~~gipv~~d~~~al~~-~~d~ 92 (350)
T 2g0t_A 17 KLYQP-GTPAAIVAW-GQLGTAHAKTTYGLLRHSRLFKPVCVV-AEHEGKMASDFVKPVRYDVPVVSSVEKAKEM-GAEV 92 (350)
T ss_dssp HHSCT-TEEEEEECT-TTTTSGGGHHHHHHHHHCSSEEEEEEE-SSCTTCBGGGTCC-CCSCCBEESSHHHHHHT-TCCE
T ss_pred hhhCc-CCCEEEEeC-CCCChHHHHHHHHHHhhCCCCeEEEEe-ecCCCCcHHHhhCCCCCCceeeCCHHHHHhc-CCCE
Confidence 34433 446777776 777766555 44665 58899888 87766543 369999999999864 6999
Q ss_pred EEEecC------hhhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEcc
Q 019500 103 SAIYVP------PPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGP 157 (340)
Q Consensus 103 avi~vp------~~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGP 157 (340)
+++.+. ++.+.+.+++|+++|...+- +-.....+..++.+++ +++|..+++=
T Consensus 93 lvig~a~~gg~l~~~~~~~I~~Al~~G~nVvs--glh~~l~~~pel~~~A-~~~Gv~i~dv 150 (350)
T 2g0t_A 93 LIIGVSNPGGYLEEQIATLVKKALSLGMDVIS--GLHFKISQQTEFLKIA-HENGTRIIDI 150 (350)
T ss_dssp EEECCCSCCHHHHHHHHHHHHHHHHTTCEEEE--CCCC--CCHHHHHHHH-HHHTCCEEES
T ss_pred EEEEecCCCCCCCHHHHHHHHHHHHcCCcEEe--CChhhhhCCHHHHHHH-HHCCCEEEEe
Confidence 999862 13556899999999998632 2222233444566655 7788887764
No 164
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=96.50 E-value=0.0055 Score=56.42 Aligned_cols=91 Identities=12% Similarity=0.090 Sum_probs=58.1
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee--cCcccc------------cCHHHhhcc-CCCcEEEEe
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH--LGLPVF------------NTVAEAKAE-TKANASAIY 106 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i--~G~p~y------------~sl~dip~~-~~vDlavi~ 106 (340)
.+|.|+|+ |.+|..++..|.+.|+++. .++++... +.+ .|+... .+..++.+. .+.|+++++
T Consensus 4 m~i~iiG~-G~~G~~~a~~l~~~g~~V~-~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 81 (316)
T 2ew2_A 4 MKIAIAGA-GAMGSRLGIMLHQGGNDVT-LIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIAL 81 (316)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEEC
T ss_pred CeEEEECc-CHHHHHHHHHHHhCCCcEE-EEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEE
Confidence 46788899 9999999999999999855 56654200 111 132211 122333220 158999999
Q ss_pred cChhhHHHHHHHHHHc-C-CcEEEEecCCCC
Q 019500 107 VPPPFAAAAILEAMEA-E-LDLVVCITEGIP 135 (340)
Q Consensus 107 vp~~~v~~~v~ea~~~-G-vk~vvi~t~Gf~ 135 (340)
+|+..+.+++++.... + -+.++.++.|+.
T Consensus 82 v~~~~~~~v~~~l~~~l~~~~~iv~~~~g~~ 112 (316)
T 2ew2_A 82 TKAQQLDAMFKAIQPMITEKTYVLCLLNGLG 112 (316)
T ss_dssp SCHHHHHHHHHHHGGGCCTTCEEEECCSSSC
T ss_pred eccccHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 9999988888776543 1 134556677876
No 165
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=96.49 E-value=0.016 Score=51.22 Aligned_cols=75 Identities=19% Similarity=0.127 Sum_probs=55.1
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChhhHHHHHHHHHH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEAME 121 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ea~~ 121 (340)
..+|.|+|+ |++|..+++.|.+.|+++. .++++. + . .+ +.|++++++|+..+.+++++...
T Consensus 19 ~~~I~iiG~-G~mG~~la~~l~~~g~~V~-~~~~~~--~------------~-~~--~aD~vi~av~~~~~~~v~~~l~~ 79 (209)
T 2raf_A 19 GMEITIFGK-GNMGQAIGHNFEIAGHEVT-YYGSKD--Q------------A-TT--LGEIVIMAVPYPALAALAKQYAT 79 (209)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEE-EECTTC--C------------C-SS--CCSEEEECSCHHHHHHHHHHTHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEE-EEcCCH--H------------H-hc--cCCEEEEcCCcHHHHHHHHHHHH
Confidence 446777897 9999999999999999865 677665 2 2 22 48999999999988888877643
Q ss_pred c-CCcEEEEecCCCC
Q 019500 122 A-ELDLVVCITEGIP 135 (340)
Q Consensus 122 ~-Gvk~vvi~t~Gf~ 135 (340)
. .-+.++..+.|++
T Consensus 80 ~~~~~~vi~~~~g~~ 94 (209)
T 2raf_A 80 QLKGKIVVDITNPLN 94 (209)
T ss_dssp HHTTSEEEECCCCBC
T ss_pred hcCCCEEEEECCCCC
Confidence 2 2234555677876
No 166
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=96.45 E-value=0.0081 Score=58.29 Aligned_cols=90 Identities=14% Similarity=0.027 Sum_probs=63.9
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCC---eEEEeeCCCCCCceec--Ccc-cccCH--HHhhccCCCcEEEEecChhhHH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGT---KMVGGVTPKKGGTEHL--GLP-VFNTV--AEAKAETKANASAIYVPPPFAA 113 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~---~vv~~VnP~~~g~~i~--G~p-~y~sl--~dip~~~~vDlavi~vp~~~v~ 113 (340)
+++|.|+|+||..|..+++.|.+.++ ++.....++..|+.+. |.. .+..+ +++ + ++|+++.|+|.....
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~~~~~~~~~~~~~~~-~--~~Dvvf~a~~~~~s~ 78 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETAF-E--GVDIALFSAGSSTSA 78 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEETTEEEEEEECCTTTT-T--TCSEEEECSCHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceecCCCceEeeCCHHHh-c--CCCEEEECCChHhHH
Confidence 46888999999999999998888755 3444455666555432 211 11111 122 2 599999999999999
Q ss_pred HHHHHHHHcCCcEEEEecCCCC
Q 019500 114 AAILEAMEAELDLVVCITEGIP 135 (340)
Q Consensus 114 ~~v~ea~~~Gvk~vvi~t~Gf~ 135 (340)
+.+..+.++|++. |..++-|.
T Consensus 79 ~~a~~~~~~G~~v-IDlSa~~R 99 (366)
T 3pwk_A 79 KYAPYAVKAGVVV-VDNTSYFR 99 (366)
T ss_dssp HHHHHHHHTTCEE-EECSSTTT
T ss_pred HHHHHHHHCCCEE-EEcCCccc
Confidence 9999999999975 66777663
No 167
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=96.44 E-value=0.0044 Score=58.21 Aligned_cols=61 Identities=15% Similarity=0.147 Sum_probs=48.1
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecCh
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPP 109 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~ 109 (340)
.+|.|+|. |++|+.+++.+..+|++++ ..||.. +.........+++++.+ ..|++++++|.
T Consensus 123 ~tvGIIGl-G~IG~~vA~~l~~~G~~V~-~~dr~~--~~~~~~~~~~~l~ell~--~aDiV~l~~P~ 183 (290)
T 3gvx_A 123 KALGILGY-GGIGRRVAHLAKAFGMRVI-AYTRSS--VDQNVDVISESPADLFR--QSDFVLIAIPL 183 (290)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCEEE-EECSSC--CCTTCSEECSSHHHHHH--HCSEEEECCCC
T ss_pred chheeecc-CchhHHHHHHHHhhCcEEE-EEeccc--cccccccccCChHHHhh--ccCeEEEEeec
Confidence 35667799 9999999999999999966 677765 33333555679999887 48999999994
No 168
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.43 E-value=0.0091 Score=52.18 Aligned_cols=88 Identities=17% Similarity=0.140 Sum_probs=59.3
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCC-Ccee-cCcccc-------cCHHHhhccCCCcEEEEecChh--
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKG-GTEH-LGLPVF-------NTVAEAKAETKANASAIYVPPP-- 110 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~-g~~i-~G~p~y-------~sl~dip~~~~vDlavi~vp~~-- 110 (340)
+.+|+|.|++|..|+.+++.|.+.|++++. +..+.. .... .++..+ .++.++.+ ++|++|-+..+.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a~~~~~ 80 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTA-VVRHPEKIKIENEHLKVKKADVSSLDEVCEVCK--GADAVISAFNPGWN 80 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEE-ECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHT--TCSEEEECCCC---
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEE-EEcCcccchhccCceEEEEecCCCHHHHHHHhc--CCCEEEEeCcCCCC
Confidence 346889999999999999999999998774 433221 0111 233322 23555554 599999887543
Q ss_pred ----------hHHHHHHHHHHcCCcEEEEecC
Q 019500 111 ----------FAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 111 ----------~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
....+++.|.+.|++.+|.+++
T Consensus 81 ~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 112 (227)
T 3dhn_A 81 NPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG 112 (227)
T ss_dssp ---CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred ChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 4566788888889988776665
No 169
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.39 E-value=0.0033 Score=61.46 Aligned_cols=83 Identities=10% Similarity=0.071 Sum_probs=57.2
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcC-C--eEEEeeCCCCCC-ce----e------------cCcccccCHHHhhccCCCcE
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYG-T--KMVGGVTPKKGG-TE----H------------LGLPVFNTVAEAKAETKANA 102 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G-~--~vv~~VnP~~~g-~~----i------------~G~p~y~sl~dip~~~~vDl 102 (340)
.+|+|+|+ |.+|+.+++.|.+.| . +++ .++.+... ++ + ..+.-+.+++++.+..++|+
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~-v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv 79 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHIT-LASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI 79 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTTTCCEEE-EEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCceEEE-EEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence 36788899 899999999999876 2 433 44443210 11 1 01111345666655334899
Q ss_pred EEEecChhhHHHHHHHHHHcCCcEE
Q 019500 103 SAIYVPPPFAAAAILEAMEAELDLV 127 (340)
Q Consensus 103 avi~vp~~~v~~~v~ea~~~Gvk~v 127 (340)
+|.++|+....++++.|++.|++.+
T Consensus 80 Vin~ag~~~~~~v~~a~l~~g~~vv 104 (405)
T 4ina_A 80 VLNIALPYQDLTIMEACLRTGVPYL 104 (405)
T ss_dssp EEECSCGGGHHHHHHHHHHHTCCEE
T ss_pred EEECCCcccChHHHHHHHHhCCCEE
Confidence 9999999989999999999999964
No 170
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.38 E-value=0.013 Score=51.22 Aligned_cols=86 Identities=13% Similarity=0.101 Sum_probs=58.6
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeC-CCCCCceecCcccc--------cCHHHhhccCCCcEEEEecChh----
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVT-PKKGGTEHLGLPVF--------NTVAEAKAETKANASAIYVPPP---- 110 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~Vn-P~~~g~~i~G~p~y--------~sl~dip~~~~vDlavi~vp~~---- 110 (340)
+|+|.|++|.+|+.+++.|.+.|++++.... +... .+..++..+ .++.++.+ ++|++|-+....
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~--~~d~vi~~ag~~~~~~ 78 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQV-PQYNNVKAVHFDVDWTPEEMAKQLH--GMDAIINVSGSGGKSL 78 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGS-CCCTTEEEEECCTTSCHHHHHTTTT--TCSEEEECCCCTTSSC
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccch-hhcCCceEEEecccCCHHHHHHHHc--CCCEEEECCcCCCCCc
Confidence 6889999999999999999999999774432 2211 111233222 23333443 599999887543
Q ss_pred ------hHHHHHHHHHHcCCcEEEEecC
Q 019500 111 ------FAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 111 ------~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
....+++.|.+.|++.+|.+++
T Consensus 79 ~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 79 LKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp CCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 2667888888899988776676
No 171
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.33 E-value=0.0095 Score=57.52 Aligned_cols=91 Identities=10% Similarity=0.015 Sum_probs=64.8
Q ss_pred cCCeEEEEeCCCCCcchHHHHHHHHcC-CeEEEeeCCCCCCceec--------Cccccc-CHHHhhccCCCcEEEEecCh
Q 019500 40 DKNTRVICQGITGKNGTFHTEQAIEYG-TKMVGGVTPKKGGTEHL--------GLPVFN-TVAEAKAETKANASAIYVPP 109 (340)
Q Consensus 40 p~~iaViVvGasgk~G~~v~~~l~~~G-~~vv~~VnP~~~g~~i~--------G~p~y~-sl~dip~~~~vDlavi~vp~ 109 (340)
..+|+|.|+|+||-.|..+.+.|.++. +++...-..+..|+.+. .+++-+ +.+++.. ++|+++.++|.
T Consensus 11 ~~~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~~~~~~~~~--~~Dvvf~alp~ 88 (351)
T 1vkn_A 11 HHMIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSK--NCDVLFTALPA 88 (351)
T ss_dssp -CCEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHH--HCSEEEECCST
T ss_pred cceeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhccCceEEeCCHHHhhc--CCCEEEECCCc
Confidence 357899999999999999999999874 45664444454555443 122221 3444423 48999999999
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCC
Q 019500 110 PFAAAAILEAMEAELDLVVCITEGIP 135 (340)
Q Consensus 110 ~~v~~~v~ea~~~Gvk~vvi~t~Gf~ 135 (340)
....+.+.++ +|++. |-.++.|.
T Consensus 89 ~~s~~~~~~~--~g~~V-IDlSsdfR 111 (351)
T 1vkn_A 89 GASYDLVREL--KGVKI-IDLGADFR 111 (351)
T ss_dssp THHHHHHTTC--CSCEE-EESSSTTT
T ss_pred HHHHHHHHHh--CCCEE-EECChhhh
Confidence 9999999888 78874 66777774
No 172
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=96.29 E-value=0.014 Score=51.69 Aligned_cols=86 Identities=16% Similarity=0.129 Sum_probs=61.2
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHh---hccCCCcEEEEecChhh-HHHHHHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEA---KAETKANASAIYVPPPF-AAAAILEA 119 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~di---p~~~~vDlavi~vp~~~-v~~~v~ea 119 (340)
+++|+|| |..|+.+++.+++.+|++++.+|.+....++.|+|++...+++ .++ .+|.+++++|... -.++.+.+
T Consensus 14 ~v~IiGA-Gg~g~~v~~~l~~~~~~~vgfiDd~~~~~~~~g~~Vlg~~~~~~~~~~~-~~~~v~iAIg~~~~R~~i~~~l 91 (220)
T 4ea9_A 14 GVVIIGG-GGHAKVVIESLRACGETVAAIVDADPTRRAVLGVPVVGDDLALPMLREQ-GLSRLFVAIGDNRLRQKLGRKA 91 (220)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCEEEEECSCC---CBTTBCEEESGGGHHHHHHT-TCCEEEECCCCHHHHHHHHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCEEEEEEeCCcccCcCCCeeEECCHHHHHHhhcc-cccEEEEecCCHHHHHHHHHHH
Confidence 5788899 7788999998888899988888865532458999999765544 332 4678888988644 45567777
Q ss_pred HHcCCcEEEEec
Q 019500 120 MEAELDLVVCIT 131 (340)
Q Consensus 120 ~~~Gvk~vvi~t 131 (340)
.+.|++...++.
T Consensus 92 ~~~g~~~~~~i~ 103 (220)
T 4ea9_A 92 RDHGFSLVNAIH 103 (220)
T ss_dssp HHTTCEECCEEC
T ss_pred HhcCCCcCCcCC
Confidence 788876543333
No 173
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=96.28 E-value=0.0098 Score=56.95 Aligned_cols=89 Identities=12% Similarity=0.054 Sum_probs=61.5
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcC---CeEEEeeCCCCCCce--ecCc--cccc-CHHHhhccCCCcEEEEecChhhHHH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYG---TKMVGGVTPKKGGTE--HLGL--PVFN-TVAEAKAETKANASAIYVPPPFAAA 114 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G---~~vv~~VnP~~~g~~--i~G~--p~y~-sl~dip~~~~vDlavi~vp~~~v~~ 114 (340)
++|.|+||+|..|+.+++.|.+.+ +++++..+++..|+. +.|. .+.. +.+++ . ++|+++.++|.....+
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~~g~~i~~~~~~~~~~-~--~~DvV~~a~g~~~s~~ 83 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSFDF-S--SVGLAFFAAAAEVSRA 83 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGGCCG-G--GCSEEEECSCHHHHHH
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccccCCcceEEecCCHHHh-c--CCCEEEEcCCcHHHHH
Confidence 578888999999999999988543 456644444433332 2232 2211 11222 2 4899999999999999
Q ss_pred HHHHHHHcCCcEEEEecCCCC
Q 019500 115 AILEAMEAELDLVVCITEGIP 135 (340)
Q Consensus 115 ~v~ea~~~Gvk~vvi~t~Gf~ 135 (340)
.+..+.+.|++. |.+++-|.
T Consensus 84 ~a~~~~~aG~kv-Id~Sa~~r 103 (340)
T 2hjs_A 84 HAERARAAGCSV-IDLSGALE 103 (340)
T ss_dssp HHHHHHHTTCEE-EETTCTTT
T ss_pred HHHHHHHCCCEE-EEeCCCCC
Confidence 999999999984 66777665
No 174
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=96.25 E-value=0.0056 Score=58.82 Aligned_cols=90 Identities=10% Similarity=0.075 Sum_probs=60.9
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcC-------CeEEEeeCCCCC-----C-cee----------------cCcccccCHHH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYG-------TKMVGGVTPKKG-----G-TEH----------------LGLPVFNTVAE 93 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G-------~~vv~~VnP~~~-----g-~~i----------------~G~p~y~sl~d 93 (340)
.+|.|+|+ |.||..++..|.+.| +++. .++++.. - +.+ .++.+..++++
T Consensus 22 ~kI~iIGa-G~mG~alA~~L~~~G~~~~~~~~~V~-~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~e 99 (375)
T 1yj8_A 22 LKISILGS-GNWASAISKVVGTNAKNNYLFENEVR-MWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLAS 99 (375)
T ss_dssp BCEEEECC-SHHHHHHHHHHHHHHHHCTTBCSCEE-EECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHH
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCccCCCCCeEE-EEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHH
Confidence 46778899 999999999998888 7754 4554331 0 001 13455567777
Q ss_pred hhccCCCcEEEEecChhhHHHHHHHHHHc---CC---cEEEEecCCCCh
Q 019500 94 AKAETKANASAIYVPPPFAAAAILEAMEA---EL---DLVVCITEGIPQ 136 (340)
Q Consensus 94 ip~~~~vDlavi~vp~~~v~~~v~ea~~~---Gv---k~vvi~t~Gf~e 136 (340)
..+ +.|++++++|+..+.+++++.... .+ ..++.++.|+..
T Consensus 100 a~~--~aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~ 146 (375)
T 1yj8_A 100 VIN--DADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLTKGFIV 146 (375)
T ss_dssp HHT--TCSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECCCSCEE
T ss_pred HHc--CCCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeCCcccc
Confidence 654 489999999999998888876540 22 245556668764
No 175
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=96.23 E-value=0.012 Score=56.33 Aligned_cols=91 Identities=18% Similarity=0.078 Sum_probs=62.5
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcC---CeEEEeeCCCCCCce--ecCcc-cccCHHHhhccCCCcEEEEecChhhHHHH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYG---TKMVGGVTPKKGGTE--HLGLP-VFNTVAEAKAETKANASAIYVPPPFAAAA 115 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G---~~vv~~VnP~~~g~~--i~G~p-~y~sl~dip~~~~vDlavi~vp~~~v~~~ 115 (340)
+++|.|+||+|..|+.+.+.|.+.+ +++++..+++..|+. +.|.. .+.+++.-+- .++|+++.|+|.....+.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~~~~~~~~~-~~vDvVf~a~g~~~s~~~ 81 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNVEEFDW-SQVHIALFSAGGELSAKW 81 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEEEEGGGCCG-GGCSEEEECSCHHHHHHH
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEEecCChHHh-cCCCEEEECCCchHHHHH
Confidence 5789999999999999999988863 456655545443332 22322 1122221111 158999999999999999
Q ss_pred HHHHHHcCCcEEEEecCCC
Q 019500 116 ILEAMEAELDLVVCITEGI 134 (340)
Q Consensus 116 v~ea~~~Gvk~vvi~t~Gf 134 (340)
+..+.+.|++. |..++-|
T Consensus 82 a~~~~~~G~~v-Id~s~~~ 99 (336)
T 2r00_A 82 APIAAEAGVVV-IDNTSHF 99 (336)
T ss_dssp HHHHHHTTCEE-EECSSTT
T ss_pred HHHHHHcCCEE-EEcCCcc
Confidence 99999999964 5566655
No 176
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=96.21 E-value=0.012 Score=56.43 Aligned_cols=108 Identities=19% Similarity=0.175 Sum_probs=64.7
Q ss_pred eEEEEeCCCCCcchHHHHHHH-HcCCeEEEeeCCCCCCce---ecCcccccCHHHhhccCCCcEEEEecChhh-HHHHHH
Q 019500 43 TRVICQGITGKNGTFHTEQAI-EYGTKMVGGVTPKKGGTE---HLGLPVFNTVAEAKAETKANASAIYVPPPF-AAAAIL 117 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~-~~G~~vv~~VnP~~~g~~---i~G~p~y~sl~dip~~~~vDlavi~vp~~~-v~~~v~ 117 (340)
.+|.|+|. |++|+.+++.+. .+|++++ ..||.....+ -.|+....+++++.. ..|++++++|... ...++.
T Consensus 164 ~~vgIIG~-G~IG~~vA~~l~~~~G~~V~-~~d~~~~~~~~~~~~g~~~~~~l~ell~--~aDvVil~vp~~~~t~~li~ 239 (348)
T 2w2k_A 164 HVLGAVGL-GAIQKEIARKAVHGLGMKLV-YYDVAPADAETEKALGAERVDSLEELAR--RSDCVSVSVPYMKLTHHLID 239 (348)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEE-EECSSCCCHHHHHHHTCEECSSHHHHHH--HCSEEEECCCCSGGGTTCBC
T ss_pred CEEEEEEE-CHHHHHHHHHHHHhcCCEEE-EECCCCcchhhHhhcCcEEeCCHHHHhc--cCCEEEEeCCCChHHHHHhh
Confidence 35667799 999999999999 8999866 6776542111 136655568988776 4899999999853 333331
Q ss_pred -HHH-HcCCcEEE-EecCCCChhhHHHHHHHHhccCCcEEEc
Q 019500 118 -EAM-EAELDLVV-CITEGIPQHDMVRVKAALNNQSKTRLVG 156 (340)
Q Consensus 118 -ea~-~~Gvk~vv-i~t~Gf~e~~~~~l~~~aar~~girviG 156 (340)
+.. ...-..++ ..+.| +..+.+++.+++ ++..+.-.|
T Consensus 240 ~~~l~~mk~gailin~srg-~~vd~~aL~~aL-~~~~i~gag 279 (348)
T 2w2k_A 240 EAFFAAMKPGSRIVNTARG-PVISQDALIAAL-KSGKLLSAG 279 (348)
T ss_dssp HHHHHHSCTTEEEEECSCG-GGBCHHHHHHHH-HTTSEEEEE
T ss_pred HHHHhcCCCCCEEEECCCC-chhCHHHHHHHH-HhCCceEEE
Confidence 222 22333433 33334 223344555555 444444333
No 177
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.17 E-value=0.018 Score=50.77 Aligned_cols=89 Identities=18% Similarity=0.191 Sum_probs=58.9
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee--cCc-ccc-----cCHHHhhccCCCcEEEEecChh-
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH--LGL-PVF-----NTVAEAKAETKANASAIYVPPP- 110 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i--~G~-p~y-----~sl~dip~~~~vDlavi~vp~~- 110 (340)
+..+|+|.|++|.+|+.+++.|.+.|++++.. ..+... ++. .++ ..+ .++.+... ++|++|-+....
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~-~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~--~~D~vi~~ag~~~ 96 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAM-VRNEEQGPELRERGASDIVVANLEEDFSHAFA--SIDAVVFAAGSGP 96 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESSGGGHHHHHHTTCSEEEECCTTSCCGGGGT--TCSEEEECCCCCT
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEE-ECChHHHHHHHhCCCceEEEcccHHHHHHHHc--CCCEEEECCCCCC
Confidence 45578889999999999999999999987643 322200 111 122 222 34455544 699999877532
Q ss_pred -------------hHHHHHHHHHHcCCcEEEEecC
Q 019500 111 -------------FAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 111 -------------~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
....+++.|.+.|++.+|.+++
T Consensus 97 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 131 (236)
T 3e8x_A 97 HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131 (236)
T ss_dssp TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEec
Confidence 2456788888889988776666
No 178
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.16 E-value=0.024 Score=56.24 Aligned_cols=96 Identities=16% Similarity=0.179 Sum_probs=65.3
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCcee-------------------------cCcccccCHHHhhcc
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH-------------------------LGLPVFNTVAEAKAE 97 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i-------------------------~G~p~y~sl~dip~~ 97 (340)
++|.|+|+ |.+|...+..|.+.|++++ .+|.+. +.+ ..+....++++..+
T Consensus 3 mkI~VIG~-G~vG~~lA~~La~~G~~V~-~~D~~~--~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~- 77 (450)
T 3gg2_A 3 LDIAVVGI-GYVGLVSATCFAELGANVR-CIDTDR--NKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVP- 77 (450)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCH--HHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGG-
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCCEEE-EEECCH--HHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHh-
Confidence 46778899 9999999999999999866 555442 110 12345567777555
Q ss_pred CCCcEEEEecChh----------hHHHHHHHHHHc-CCcEEEEecCCCChhhHHHHHH
Q 019500 98 TKANASAIYVPPP----------FAAAAILEAMEA-ELDLVVCITEGIPQHDMVRVKA 144 (340)
Q Consensus 98 ~~vDlavi~vp~~----------~v~~~v~ea~~~-Gvk~vvi~t~Gf~e~~~~~l~~ 144 (340)
+.|++++++|.. .+.+++++..+. .-..+|+..+.++....+++.+
T Consensus 78 -~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~ 134 (450)
T 3gg2_A 78 -EADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRK 134 (450)
T ss_dssp -GCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHH
T ss_pred -cCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHH
Confidence 489999999887 788888777664 2345566666666544444433
No 179
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=96.10 E-value=0.0071 Score=57.42 Aligned_cols=67 Identities=13% Similarity=0.146 Sum_probs=48.5
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccc---cCHHHhhccCCCcEEEEecCh-hhHHHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVF---NTVAEAKAETKANASAIYVPP-PFAAAAI 116 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y---~sl~dip~~~~vDlavi~vp~-~~v~~~v 116 (340)
+|.|+|. |++|+.+++.+..+|++++ ..|+.. +...++..+ .+++++.. ..|++++++|. +....++
T Consensus 141 tvGIiG~-G~IG~~vA~~l~~~G~~V~-~~dr~~--~~~~~~~~~~~~~~l~ell~--~aDiV~l~~Plt~~t~~li 211 (315)
T 3pp8_A 141 SVGIMGA-GVLGAKVAESLQAWGFPLR-CWSRSR--KSWPGVESYVGREELRAFLN--QTRVLINLLPNTAQTVGII 211 (315)
T ss_dssp CEEEECC-SHHHHHHHHHHHTTTCCEE-EEESSC--CCCTTCEEEESHHHHHHHHH--TCSEEEECCCCCGGGTTCB
T ss_pred EEEEEee-CHHHHHHHHHHHHCCCEEE-EEcCCc--hhhhhhhhhcccCCHHHHHh--hCCEEEEecCCchhhhhhc
Confidence 4566699 9999999999999999966 566544 333444333 57888886 58999999994 3444444
No 180
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=96.06 E-value=0.011 Score=55.74 Aligned_cols=68 Identities=19% Similarity=0.228 Sum_probs=50.8
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChhh-HHHHH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPF-AAAAI 116 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~-v~~~v 116 (340)
..+|.|+|. |++|+.+++.+..+|++++ ..||... +. +...+.+++++.. ..|++++++|... ...++
T Consensus 124 g~~vgIIG~-G~IG~~~A~~l~~~G~~V~-~~dr~~~-~~--~~~~~~~l~ell~--~aDvV~l~~P~~~~t~~~i 192 (303)
T 1qp8_A 124 GEKVAVLGL-GEIGTRVGKILAALGAQVR-GFSRTPK-EG--PWRFTNSLEEALR--EARAAVCALPLNKHTRGLV 192 (303)
T ss_dssp TCEEEEESC-STHHHHHHHHHHHTTCEEE-EECSSCC-CS--SSCCBSCSHHHHT--TCSEEEECCCCSTTTTTCB
T ss_pred CCEEEEEcc-CHHHHHHHHHHHHCCCEEE-EECCCcc-cc--CcccCCCHHHHHh--hCCEEEEeCcCchHHHHHh
Confidence 335677799 9999999999999999866 6777652 22 4445678989876 5899999999763 44444
No 181
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=96.06 E-value=0.0045 Score=55.00 Aligned_cols=89 Identities=15% Similarity=0.073 Sum_probs=59.0
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ce--ecCcccccCHHHhhccCCCcEEEEecChhhHHHHHH-
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAIL- 117 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~--i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~- 117 (340)
..+|.|+|+ |++|+.+++.+.+.|++++ .++++... +. -.|+..+ ++.++.+ +.|++++++|+....++++
T Consensus 28 ~~~I~iiG~-G~~G~~la~~l~~~g~~V~-~~~r~~~~~~~~~~~g~~~~-~~~~~~~--~~DvVi~av~~~~~~~v~~l 102 (215)
T 2vns_A 28 APKVGILGS-GDFARSLATRLVGSGFKVV-VGSRNPKRTARLFPSAAQVT-FQEEAVS--SPEVIFVAVFREHYSSLCSL 102 (215)
T ss_dssp -CCEEEECC-SHHHHHHHHHHHHTTCCEE-EEESSHHHHHHHSBTTSEEE-EHHHHTT--SCSEEEECSCGGGSGGGGGG
T ss_pred CCEEEEEcc-CHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHcCCcee-cHHHHHh--CCCEEEECCChHHHHHHHHH
Confidence 356778896 9999999999999998855 56654310 11 1255554 6777665 5999999999977655543
Q ss_pred -HHHHcCCcEEEEecCCCChh
Q 019500 118 -EAMEAELDLVVCITEGIPQH 137 (340)
Q Consensus 118 -ea~~~Gvk~vvi~t~Gf~e~ 137 (340)
... .+ +.++.+++|.+.+
T Consensus 103 ~~~~-~~-~~vv~~s~g~~~~ 121 (215)
T 2vns_A 103 SDQL-AG-KILVDVSNPTEQE 121 (215)
T ss_dssp HHHH-TT-CEEEECCCCCHHH
T ss_pred HHhc-CC-CEEEEeCCCcccc
Confidence 222 23 3556677887543
No 182
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=96.05 E-value=0.0094 Score=55.41 Aligned_cols=90 Identities=11% Similarity=0.001 Sum_probs=57.5
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCcee----------------------------------cCccc
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH----------------------------------LGLPV 87 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i----------------------------------~G~p~ 87 (340)
..+|.|+|+ |.||..++..+.+.|++++ .+|++. +.. ..+..
T Consensus 15 ~~~I~VIG~-G~mG~~iA~~la~~G~~V~-~~d~~~--~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~ 90 (302)
T 1f0y_A 15 VKHVTVIGG-GLMGAGIAQVAAATGHTVV-LVDQTE--DILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT 90 (302)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCH--HHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEE-EEECCH--HHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEE
Confidence 346778899 9999999999999999865 666653 111 12344
Q ss_pred ccCHHHhhccCCCcEEEEecChhh--HHHHHHHHHHcC-CcEEEE-ecCCCChh
Q 019500 88 FNTVAEAKAETKANASAIYVPPPF--AAAAILEAMEAE-LDLVVC-ITEGIPQH 137 (340)
Q Consensus 88 y~sl~dip~~~~vDlavi~vp~~~--v~~~v~ea~~~G-vk~vvi-~t~Gf~e~ 137 (340)
..++++... +.|++|+++|.+. ..+++++..+.- -+.+++ .+++++.+
T Consensus 91 ~~~~~~~~~--~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~ 142 (302)
T 1f0y_A 91 STDAASVVH--STDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQIT 142 (302)
T ss_dssp ESCHHHHTT--SCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHH
T ss_pred ecCHHHhhc--CCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHH
Confidence 567775554 5899999999864 334555543321 123333 46787644
No 183
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.03 E-value=0.0069 Score=56.00 Aligned_cols=89 Identities=16% Similarity=0.094 Sum_probs=60.3
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCcee------------------------------cCcccccCHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH------------------------------LGLPVFNTVAE 93 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i------------------------------~G~p~y~sl~d 93 (340)
+|.|+|+ |.||..+++.+.+.|++++ .+|++. +.. ..+....++++
T Consensus 6 kV~VIGa-G~mG~~iA~~la~~G~~V~-l~d~~~--~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~ 81 (283)
T 4e12_A 6 NVTVLGT-GVLGSQIAFQTAFHGFAVT-AYDINT--DALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQ 81 (283)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSH--HHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHH
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCeEE-EEeCCH--HHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHH
Confidence 5677799 9999999999999999855 566553 211 01345567877
Q ss_pred hhccCCCcEEEEecChh--hHHHHHHHHHHc-CCcEEEE-ecCCCChhh
Q 019500 94 AKAETKANASAIYVPPP--FAAAAILEAMEA-ELDLVVC-ITEGIPQHD 138 (340)
Q Consensus 94 ip~~~~vDlavi~vp~~--~v~~~v~ea~~~-Gvk~vvi-~t~Gf~e~~ 138 (340)
... +.|++|.++|.. ...+++++..+. .-..+++ .|++.+.++
T Consensus 82 ~~~--~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~ 128 (283)
T 4e12_A 82 AVK--DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSD 128 (283)
T ss_dssp HTT--TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHH
T ss_pred Hhc--cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHH
Confidence 654 589999999986 666666666554 2333443 567776443
No 184
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=95.97 E-value=0.026 Score=55.45 Aligned_cols=88 Identities=19% Similarity=0.158 Sum_probs=56.7
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee---------------------cC-cccccCHHHhhccCCC
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH---------------------LG-LPVFNTVAEAKAETKA 100 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i---------------------~G-~p~y~sl~dip~~~~v 100 (340)
+|.|+|+ |.+|..++..|.+.|++++ .++.+... +.+ .| +....++++... +.
T Consensus 2 kI~VIG~-G~vG~~~A~~la~~G~~V~-~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~--~a 77 (436)
T 1mv8_A 2 RISIFGL-GYVGAVCAGCLSARGHEVI-GVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVL--DS 77 (436)
T ss_dssp EEEEECC-STTHHHHHHHHHHTTCEEE-EECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHH--TC
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCEEE-EEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhc--cC
Confidence 5677798 9999999999999999865 55553200 000 22 445567776554 48
Q ss_pred cEEEEecChhh----------HHHHHHHHHHc-CC---cEEEEecCCCC
Q 019500 101 NASAIYVPPPF----------AAAAILEAMEA-EL---DLVVCITEGIP 135 (340)
Q Consensus 101 Dlavi~vp~~~----------v~~~v~ea~~~-Gv---k~vvi~t~Gf~ 135 (340)
|++++++|... +.+++++..+. .- ..+|+..+..+
T Consensus 78 DvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~ 126 (436)
T 1mv8_A 78 DVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVL 126 (436)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCC
T ss_pred CEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcC
Confidence 99999998765 77777665542 22 23444544444
No 185
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.95 E-value=0.027 Score=56.31 Aligned_cols=101 Identities=18% Similarity=0.128 Sum_probs=65.7
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee--c-------C-------------cccccCHHHhhcc
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH--L-------G-------------LPVFNTVAEAKAE 97 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i--~-------G-------------~p~y~sl~dip~~ 97 (340)
-+++|.|+|+ |.+|...+..|.+.|++++ .+|.+... +.+ . | +....++++..+
T Consensus 7 ~~~~I~VIG~-G~vG~~lA~~la~~G~~V~-~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~- 83 (478)
T 2y0c_A 7 GSMNLTIIGS-GSVGLVTGACLADIGHDVF-CLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVA- 83 (478)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHH-
T ss_pred CCceEEEECc-CHHHHHHHHHHHhCCCEEE-EEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhh-
Confidence 4778899999 9999999999999999865 55543200 011 1 1 233345655444
Q ss_pred CCCcEEEEecCh----------hhHHHHHHHHHHc-CCcEEEEecCCCChhhHHHHHHH
Q 019500 98 TKANASAIYVPP----------PFAAAAILEAMEA-ELDLVVCITEGIPQHDMVRVKAA 145 (340)
Q Consensus 98 ~~vDlavi~vp~----------~~v~~~v~ea~~~-Gvk~vvi~t~Gf~e~~~~~l~~~ 145 (340)
+.|++++++|. ..+.+++++..+. .-..+|+..++++....+++.+.
T Consensus 84 -~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~gt~~~l~~~ 141 (478)
T 2y0c_A 84 -HGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAA 141 (478)
T ss_dssp -HCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHH
T ss_pred -cCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCCchHHHHHH
Confidence 38999999998 7888888776653 33455666677755443334333
No 186
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=95.91 E-value=0.033 Score=50.52 Aligned_cols=88 Identities=13% Similarity=0.116 Sum_probs=57.7
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee--c---Cc----c-cccCHHHhhccCCCcEEEEecChhhH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH--L---GL----P-VFNTVAEAKAETKANASAIYVPPPFA 112 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i--~---G~----p-~y~sl~dip~~~~vDlavi~vp~~~v 112 (340)
+|.|+|+ |.+|...+..|.+.|+++. .++++... +.+ . |. . ...+.+.+ + +.|++++++|+..+
T Consensus 2 ~i~iiG~-G~~G~~~a~~l~~~g~~V~-~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~--~~d~vi~~v~~~~~ 76 (291)
T 1ks9_A 2 KITVLGC-GALGQLWLTALCKQGHEVQ-GWLRVPQPYCSVNLVETDGSIFNESLTANDPDFL-A--TSDLLLVTLKAWQV 76 (291)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCCSEEEEEEECTTSCEEEEEEEESCHHHH-H--TCSEEEECSCGGGH
T ss_pred eEEEECc-CHHHHHHHHHHHhCCCCEE-EEEcCccceeeEEEEcCCCceeeeeeeecCcccc-C--CCCEEEEEecHHhH
Confidence 5778899 9999999999999999855 55554310 111 1 21 0 12333333 3 48999999999999
Q ss_pred HHHHHHHHHc-C-CcEEEEecCCCCh
Q 019500 113 AAAILEAMEA-E-LDLVVCITEGIPQ 136 (340)
Q Consensus 113 ~~~v~ea~~~-G-vk~vvi~t~Gf~e 136 (340)
.+++++.... + -..++.++.|+..
T Consensus 77 ~~v~~~l~~~l~~~~~vv~~~~g~~~ 102 (291)
T 1ks9_A 77 SDAVKSLASTLPVTTPILLIHNGMGT 102 (291)
T ss_dssp HHHHHHHHTTSCTTSCEEEECSSSCT
T ss_pred HHHHHHHHhhCCCCCEEEEecCCCCc
Confidence 8888776543 1 1235556888843
No 187
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=95.91 E-value=0.021 Score=56.09 Aligned_cols=104 Identities=13% Similarity=0.062 Sum_probs=65.0
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChh-hHHHHH-H-H
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPP-FAAAAI-L-E 118 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~-~v~~~v-~-e 118 (340)
..+|.|+|. |++|+.+++.+..+|++++ ..||... ....+...+.+++++.. ..|++++++|.. .+..++ + .
T Consensus 145 gktlGiIGl-G~IG~~vA~~l~~~G~~V~-~~d~~~~-~~~~~~~~~~~l~ell~--~aDvV~l~~P~t~~t~~li~~~~ 219 (404)
T 1sc6_A 145 GKKLGIIGY-GHIGTQLGILAESLGMYVY-FYDIENK-LPLGNATQVQHLSDLLN--MSDVVSLHVPENPSTKNMMGAKE 219 (404)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCC-CCCTTCEECSCHHHHHH--HCSEEEECCCSSTTTTTCBCHHH
T ss_pred CCEEEEEeE-CHHHHHHHHHHHHCCCEEE-EEcCCch-hccCCceecCCHHHHHh--cCCEEEEccCCChHHHHHhhHHH
Confidence 335677799 9999999999999999966 6787642 22334555679999987 489999999975 233333 1 2
Q ss_pred HHHcCCcEE-EEecCCCChhhHHHHHHHHhccCCc
Q 019500 119 AMEAELDLV-VCITEGIPQHDMVRVKAALNNQSKT 152 (340)
Q Consensus 119 a~~~Gvk~v-vi~t~Gf~e~~~~~l~~~aar~~gi 152 (340)
.....-..+ |..+.|- -.+.++|.+++ ++.++
T Consensus 220 l~~mk~ga~lIN~aRg~-~vd~~aL~~aL-~~g~i 252 (404)
T 1sc6_A 220 ISLMKPGSLLINASRGT-VVDIPALADAL-ASKHL 252 (404)
T ss_dssp HHHSCTTEEEEECSCSS-SBCHHHHHHHH-HTTSE
T ss_pred HhhcCCCeEEEECCCCh-HHhHHHHHHHH-HcCCc
Confidence 222333333 4444443 23334555554 44433
No 188
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=95.91 E-value=0.016 Score=50.61 Aligned_cols=84 Identities=12% Similarity=0.041 Sum_probs=56.3
Q ss_pred EEEeCCCCCcchHHHHHHH-HcCCeEEEee-CCC-CCCce----ecCccc-------ccCHHHhhccCCCcEEEEecCh-
Q 019500 45 VICQGITGKNGTFHTEQAI-EYGTKMVGGV-TPK-KGGTE----HLGLPV-------FNTVAEAKAETKANASAIYVPP- 109 (340)
Q Consensus 45 ViVvGasgk~G~~v~~~l~-~~G~~vv~~V-nP~-~~g~~----i~G~p~-------y~sl~dip~~~~vDlavi~vp~- 109 (340)
|+|.|++|.+|+.+++.|. +.|++++... +|. .. ++ -.++.. ..++.++.+ ++|++|.+...
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vv~~ag~~ 84 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRI-PPEIIDHERVTVIEGSFQNPGXLEQAVT--NAEVVFVGAMES 84 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHS-CHHHHTSTTEEEEECCTTCHHHHHHHHT--TCSEEEESCCCC
T ss_pred EEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccc-hhhccCCCceEEEECCCCCHHHHHHHHc--CCCEEEEcCCCC
Confidence 7888999999999999999 7899866332 222 10 11 112222 224555554 68999987754
Q ss_pred --hhHHHHHHHHHHcCCcEEEEecC
Q 019500 110 --PFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 110 --~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
+ ...+++.+.+.|++.+|.+++
T Consensus 85 n~~-~~~~~~~~~~~~~~~iv~iSs 108 (221)
T 3r6d_A 85 GSD-MASIVKALSRXNIRRVIGVSM 108 (221)
T ss_dssp HHH-HHHHHHHHHHTTCCEEEEEEE
T ss_pred Chh-HHHHHHHHHhcCCCeEEEEee
Confidence 3 566777788889988776665
No 189
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=95.91 E-value=0.024 Score=51.57 Aligned_cols=73 Identities=8% Similarity=-0.053 Sum_probs=53.1
Q ss_pred cCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChhhHHHHHHHH
Q 019500 40 DKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEA 119 (340)
Q Consensus 40 p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ea 119 (340)
|...+|.|+|+ |++|..+.+.|.+.|++++ .++.. +++. +.| ++++|.+.+.+++++.
T Consensus 4 ~~~mkI~IIG~-G~~G~sLA~~L~~~G~~V~-~~~~~---------------~~~~---~aD--ilavP~~ai~~vl~~l 61 (232)
T 3dfu_A 4 APRLRVGIFDD-GSSTVNMAEKLDSVGHYVT-VLHAP---------------EDIR---DFE--LVVIDAHGVEGYVEKL 61 (232)
T ss_dssp CCCCEEEEECC-SCCCSCHHHHHHHTTCEEE-ECSSG---------------GGGG---GCS--EEEECSSCHHHHHHHH
T ss_pred CCCcEEEEEee-CHHHHHHHHHHHHCCCEEE-EecCH---------------HHhc---cCC--EEEEcHHHHHHHHHHH
Confidence 44567888899 9999999999999999866 55541 2333 378 9999999999999887
Q ss_pred HHcC-CcEEEEecCCC
Q 019500 120 MEAE-LDLVVCITEGI 134 (340)
Q Consensus 120 ~~~G-vk~vvi~t~Gf 134 (340)
...- -..+|+-++|-
T Consensus 62 ~~~l~~g~ivvd~sgs 77 (232)
T 3dfu_A 62 SAFARRGQMFLHTSLT 77 (232)
T ss_dssp HTTCCTTCEEEECCSS
T ss_pred HHhcCCCCEEEEECCc
Confidence 6532 23445444554
No 190
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.91 E-value=0.012 Score=50.84 Aligned_cols=86 Identities=13% Similarity=0.094 Sum_probs=49.4
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee-cCccccc-CHHH----hhccCCCcEEEEecCh-------
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH-LGLPVFN-TVAE----AKAETKANASAIYVPP------- 109 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i-~G~p~y~-sl~d----ip~~~~vDlavi~vp~------- 109 (340)
+|+|.|++|.+|+.+++.|.+.|++++.. ..+... .+. .++..+. ++.+ ..+ ++|++|-+...
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~~~~~~~~D~~d~~~~~~~--~~d~vi~~ag~~~~~~~~ 78 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAI-VRNAGKITQTHKDINILQKDIFDLTLSDLS--DQNVVVDAYGISPDEAEK 78 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESCSHHHHHHCSSSEEEECCGGGCCHHHHT--TCSEEEECCCSSTTTTTS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEE-EcCchhhhhccCCCeEEeccccChhhhhhc--CCCEEEECCcCCccccch
Confidence 68899999999999999999999987743 322200 000 1222221 2222 222 47777776643
Q ss_pred --hhHHHHHHHHHHcCCcEEEEecC
Q 019500 110 --PFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 110 --~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
.....+++.|.+.|++.+|++++
T Consensus 79 ~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 79 HVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp HHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred HHHHHHHHHHHHHhcCCceEEEEec
Confidence 23344555555555666555554
No 191
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=95.88 E-value=0.019 Score=52.07 Aligned_cols=86 Identities=21% Similarity=0.205 Sum_probs=58.7
Q ss_pred EEEEeCCCCCcchHHHHHHHHc-CCeEEEee-CCCCCCce--ecCcccc-------cCHHHhhccCCCcEEEEecCh---
Q 019500 44 RVICQGITGKNGTFHTEQAIEY-GTKMVGGV-TPKKGGTE--HLGLPVF-------NTVAEAKAETKANASAIYVPP--- 109 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~-G~~vv~~V-nP~~~g~~--i~G~p~y-------~sl~dip~~~~vDlavi~vp~--- 109 (340)
+|+|.|++|..|+.+++.|.+. |++++..+ +|... .. -.++.++ .++.++.+ ++|.++.+...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~-~~~~~~~v~~~~~D~~d~~~l~~~~~--~~d~vi~~a~~~~~ 78 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKV-PDDWRGKVSVRQLDYFNQESMVEAFK--GMDTVVFIPSIIHP 78 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGS-CGGGBTTBEEEECCTTCHHHHHHHTT--TCSEEEECCCCCCS
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHH-HHhhhCCCEEEEcCCCCHHHHHHHHh--CCCEEEEeCCCCcc
Confidence 5788899999999999998887 88876443 23221 11 1233322 23445554 69999988754
Q ss_pred -----hhHHHHHHHHHHcCCcEEEEecC
Q 019500 110 -----PFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 110 -----~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
.....+++.|.+.|++.+|.+++
T Consensus 79 ~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 79 SFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred chhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 45567888888999998776665
No 192
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.86 E-value=0.04 Score=51.44 Aligned_cols=88 Identities=10% Similarity=0.065 Sum_probs=60.7
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCC------Cceec---------CcccccCHHHhhccCCCcEEEEecC
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKG------GTEHL---------GLPVFNTVAEAKAETKANASAIYVP 108 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~------g~~i~---------G~p~y~sl~dip~~~~vDlavi~vp 108 (340)
+|.|+|+ |.+|......|.+.|+++. .++++.. |-.+. .++++.+.+++. +.|+++++||
T Consensus 4 kI~IiGa-GaiG~~~a~~L~~~g~~V~-~~~r~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~---~~D~vilavk 78 (312)
T 3hn2_A 4 RIAIVGA-GALGLYYGALLQRSGEDVH-FLLRRDYEAIAGNGLKVFSINGDFTLPHVKGYRAPEEIG---PMDLVLVGLK 78 (312)
T ss_dssp CEEEECC-STTHHHHHHHHHHTSCCEE-EECSTTHHHHHHTCEEEEETTCCEEESCCCEESCHHHHC---CCSEEEECCC
T ss_pred EEEEECc-CHHHHHHHHHHHHCCCeEE-EEEcCcHHHHHhCCCEEEcCCCeEEEeeceeecCHHHcC---CCCEEEEecC
Confidence 5677799 9999999999999898755 4554320 11111 223455676653 4899999999
Q ss_pred hhhHHHHHHHHHHc-CC-cEEEEecCCCCh
Q 019500 109 PPFAAAAILEAMEA-EL-DLVVCITEGIPQ 136 (340)
Q Consensus 109 ~~~v~~~v~ea~~~-Gv-k~vvi~t~Gf~e 136 (340)
+....+++++.... +- ..++.++.|+..
T Consensus 79 ~~~~~~~l~~l~~~l~~~~~iv~l~nGi~~ 108 (312)
T 3hn2_A 79 TFANSRYEELIRPLVEEGTQILTLQNGLGN 108 (312)
T ss_dssp GGGGGGHHHHHGGGCCTTCEEEECCSSSSH
T ss_pred CCCcHHHHHHHHhhcCCCCEEEEecCCCCc
Confidence 99999888887643 21 356777889963
No 193
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=95.86 E-value=0.018 Score=54.41 Aligned_cols=89 Identities=12% Similarity=0.084 Sum_probs=60.5
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcC-------CeEEEeeCCCCC------Ccee----------------cCcccccCHHH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYG-------TKMVGGVTPKKG------GTEH----------------LGLPVFNTVAE 93 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G-------~~vv~~VnP~~~------g~~i----------------~G~p~y~sl~d 93 (340)
.+|.|+|+ |.||..++..|.+.| +++. .++++.. .+.+ .++....++++
T Consensus 9 mkI~iIG~-G~mG~~~a~~l~~~g~~~~~~~~~V~-~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (354)
T 1x0v_A 9 KKVCIVGS-GNWGSAIAKIVGGNAAQLAQFDPRVT-MWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQ 86 (354)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHHHHHCTTEEEEEE-EECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHH
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCcccCCCCeEE-EEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHH
Confidence 46788899 999999999998887 6644 5555431 0011 12344567777
Q ss_pred hhccCCCcEEEEecChhhHHHHHHHHHHc-C-CcEEEEecCCCC
Q 019500 94 AKAETKANASAIYVPPPFAAAAILEAMEA-E-LDLVVCITEGIP 135 (340)
Q Consensus 94 ip~~~~vDlavi~vp~~~v~~~v~ea~~~-G-vk~vvi~t~Gf~ 135 (340)
..+ +.|++++++|+..+.+++++.... . -..++.++.|+.
T Consensus 87 ~~~--~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 87 AAE--DADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp HHT--TCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred HHc--CCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 654 589999999999988888776442 1 124566677875
No 194
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=95.86 E-value=0.018 Score=54.18 Aligned_cols=88 Identities=14% Similarity=0.123 Sum_probs=59.4
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee---cCc--------------ccccCHHHhhccCCCcEEE
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH---LGL--------------PVFNTVAEAKAETKANASA 104 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i---~G~--------------p~y~sl~dip~~~~vDlav 104 (340)
.+|.|+|+ |.+|..++..|.+.|+++. .++++... +.+ .|+ ..+.+++++.+ +.|+++
T Consensus 5 mki~iiG~-G~~G~~~a~~L~~~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~D~vi 80 (359)
T 1bg6_A 5 KTYAVLGL-GNGGHAFAAYLALKGQSVL-AWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVK--DADVIL 80 (359)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHT--TCSEEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCEEE-EEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHh--cCCEEE
Confidence 46788899 9999999999999999854 66654200 111 121 35668888654 589999
Q ss_pred EecChhhHHHHHHHHHHc-CCcEEEEecCCC
Q 019500 105 IYVPPPFAAAAILEAMEA-ELDLVVCITEGI 134 (340)
Q Consensus 105 i~vp~~~v~~~v~ea~~~-Gvk~vvi~t~Gf 134 (340)
+++|+....+++++.... .-..+|+...|.
T Consensus 81 ~~v~~~~~~~~~~~l~~~l~~~~~vv~~~~~ 111 (359)
T 1bg6_A 81 IVVPAIHHASIAANIASYISEGQLIILNPGA 111 (359)
T ss_dssp ECSCGGGHHHHHHHHGGGCCTTCEEEESSCC
T ss_pred EeCCchHHHHHHHHHHHhCCCCCEEEEcCCC
Confidence 999999998888776543 223334444553
No 195
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.86 E-value=0.015 Score=54.56 Aligned_cols=110 Identities=19% Similarity=0.180 Sum_probs=70.8
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCce-------ec----------CcccccCHHHhhccCCCcEEEE
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE-------HL----------GLPVFNTVAEAKAETKANASAI 105 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~-------i~----------G~p~y~sl~dip~~~~vDlavi 105 (340)
.+|.|+|+ |.+|......|.+.|+++. .++++.. +. +. .++++.+.+++.+ +.|++++
T Consensus 3 mkI~IiGa-GaiG~~~a~~L~~~g~~V~-~~~r~~~-~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~--~~DlVil 77 (320)
T 3i83_A 3 LNILVIGT-GAIGSFYGALLAKTGHCVS-VVSRSDY-ETVKAKGIRIRSATLGDYTFRPAAVVRSAAELET--KPDCTLL 77 (320)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHTTCEEE-EECSTTH-HHHHHHCEEEEETTTCCEEECCSCEESCGGGCSS--CCSEEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEE-EEeCChH-HHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCC--CCCEEEE
Confidence 46778899 9999999999999898755 5554321 11 11 1334567777653 5899999
Q ss_pred ecChhhHHHHHHHHHHc-C-CcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCCCC
Q 019500 106 YVPPPFAAAAILEAMEA-E-LDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPG 161 (340)
Q Consensus 106 ~vp~~~v~~~v~ea~~~-G-vk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc~G 161 (340)
+||+....+++++.... + -..++.++.|+...+ .+.+.. ... --+-||...|
T Consensus 78 avK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~~--~l~~~~-~~~-~vl~g~~~~~ 131 (320)
T 3i83_A 78 CIKVVEGADRVGLLRDAVAPDTGIVLISNGIDIEP--EVAAAF-PDN-EVISGLAFIG 131 (320)
T ss_dssp CCCCCTTCCHHHHHTTSCCTTCEEEEECSSSSCSH--HHHHHS-TTS-CEEEEEEEEE
T ss_pred ecCCCChHHHHHHHHhhcCCCCEEEEeCCCCChHH--HHHHHC-CCC-cEEEEEEEec
Confidence 99999988888776532 1 135677889996432 233332 122 2355666554
No 196
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=95.84 E-value=0.02 Score=53.73 Aligned_cols=92 Identities=16% Similarity=0.207 Sum_probs=60.8
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCC------Ccee--------cCcccccCHHHhhccCCCcEEEEec
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKG------GTEH--------LGLPVFNTVAEAKAETKANASAIYV 107 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~------g~~i--------~G~p~y~sl~dip~~~~vDlavi~v 107 (340)
..+|.|+|+ |.+|...+..|.+.|+++....++... |..+ ..+++..+.+++. +.|++++++
T Consensus 19 ~~kI~IiGa-Ga~G~~~a~~L~~~G~~V~l~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~D~vilav 94 (318)
T 3hwr_A 19 GMKVAIMGA-GAVGCYYGGMLARAGHEVILIARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSAVQ---GADLVLFCV 94 (318)
T ss_dssp -CEEEEESC-SHHHHHHHHHHHHTTCEEEEECCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGGGT---TCSEEEECC
T ss_pred CCcEEEECc-CHHHHHHHHHHHHCCCeEEEEEcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHHcC---CCCEEEEEc
Confidence 446677799 999999999999999885522333210 0001 1233445666543 589999999
Q ss_pred ChhhHHHHHHHHHHc-C-CcEEEEecCCCChh
Q 019500 108 PPPFAAAAILEAMEA-E-LDLVVCITEGIPQH 137 (340)
Q Consensus 108 p~~~v~~~v~ea~~~-G-vk~vvi~t~Gf~e~ 137 (340)
|+..+.+++++.... + -..++.++.|+..+
T Consensus 95 k~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~ 126 (318)
T 3hwr_A 95 KSTDTQSAALAMKPALAKSALVLSLQNGVENA 126 (318)
T ss_dssp CGGGHHHHHHHHTTTSCTTCEEEEECSSSSHH
T ss_pred ccccHHHHHHHHHHhcCCCCEEEEeCCCCCcH
Confidence 999998888876543 1 13466688999754
No 197
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=95.84 E-value=0.029 Score=47.71 Aligned_cols=87 Identities=20% Similarity=0.155 Sum_probs=57.3
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeC-CCCCCce--ecCccc-------ccCHHHhhccCCCcEEEEecChh--
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVT-PKKGGTE--HLGLPV-------FNTVAEAKAETKANASAIYVPPP-- 110 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~Vn-P~~~g~~--i~G~p~-------y~sl~dip~~~~vDlavi~vp~~-- 110 (340)
.+|+|.|++|.+|+.+++.|.+.|++++.... |... .+ ..++.. ..++.++.+ ++|+++-+....
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~~~~ 80 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL-PSEGPRPAHVVVGDVLQAADVDKTVA--GQDAVIVLLGTRND 80 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGS-CSSSCCCSEEEESCTTSHHHHHHHHT--TCSEEEECCCCTTC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhc-ccccCCceEEEEecCCCHHHHHHHHc--CCCEEEECccCCCC
Confidence 36888999999999999999999998764322 2110 01 112221 224555554 589999876542
Q ss_pred ---------hHHHHHHHHHHcCCcEEEEecC
Q 019500 111 ---------FAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 111 ---------~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
....+++.|.+.+++.++.+++
T Consensus 81 ~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss 111 (206)
T 1hdo_A 81 LSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (206)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCccchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence 3567778888889988776665
No 198
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.79 E-value=0.064 Score=44.55 Aligned_cols=90 Identities=13% Similarity=0.077 Sum_probs=55.3
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ce---ecCcccc-cC---HHHhhcc--CCCcEEEEecChhhH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE---HLGLPVF-NT---VAEAKAE--TKANASAIYVPPPFA 112 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~---i~G~p~y-~s---l~dip~~--~~vDlavi~vp~~~v 112 (340)
.+|+|+|+ |.+|..+++.|.+.|++++ .++++... +. -.|..++ .+ .+.+.+. .+.|++++++|....
T Consensus 20 ~~v~IiG~-G~iG~~la~~L~~~g~~V~-vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~~ 97 (155)
T 2g1u_A 20 KYIVIFGC-GRLGSLIANLASSSGHSVV-VVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDDST 97 (155)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCHHH
T ss_pred CcEEEECC-CHHHHHHHHHHHhCCCeEE-EEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCcHH
Confidence 46778898 9999999999999999855 55443210 11 1233322 22 2222110 148999999998777
Q ss_pred HHHHHHHHH--cCCcEEEEecCCC
Q 019500 113 AAAILEAME--AELDLVVCITEGI 134 (340)
Q Consensus 113 ~~~v~ea~~--~Gvk~vvi~t~Gf 134 (340)
...+.+.++ .+...++..+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 98 NFFISMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp HHHHHHHHHHTSCCSEEEEECSSG
T ss_pred HHHHHHHHHHHCCCCeEEEEECCH
Confidence 666666655 4666666555543
No 199
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=95.78 E-value=0.0099 Score=55.53 Aligned_cols=90 Identities=10% Similarity=0.038 Sum_probs=58.7
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCce-e------------cCccc-------ccCHHHhhccCCC
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE-H------------LGLPV-------FNTVAEAKAETKA 100 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~-i------------~G~p~-------y~sl~dip~~~~v 100 (340)
+..+|+|.|++|.+|+.+++.|.+.|++++..........+ . .++.. ..++.++.+ ++
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~ 101 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--GV 101 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--TC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc--CC
Confidence 35578899999999999999999999997754432210010 0 22222 223555554 69
Q ss_pred cEEEEecCh------------------hhHHHHHHHHHHcCCcEEEEecC
Q 019500 101 NASAIYVPP------------------PFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 101 Dlavi~vp~------------------~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
|++|-+... .....+++.|.+.|++.+|.+++
T Consensus 102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 999987642 11334788888899988776664
No 200
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.77 E-value=0.04 Score=44.04 Aligned_cols=91 Identities=15% Similarity=0.114 Sum_probs=55.7
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee---cCcccc-c---CHHHhhc--cCCCcEEEEecChhh
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH---LGLPVF-N---TVAEAKA--ETKANASAIYVPPPF 111 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i---~G~p~y-~---sl~dip~--~~~vDlavi~vp~~~ 111 (340)
..+|+|+|+ |.+|..+++.|.+.|++++ .++++... +.+ .|++.+ . +.+.+.+ -.+.|++++++|.+.
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~-~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~ 81 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIV-LIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEE 81 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEE-EEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCch
Confidence 356888899 9999999999999998855 55554310 111 244332 2 2222221 125899999999876
Q ss_pred HHHHH-HHHHHcCCcEEEEecCCC
Q 019500 112 AAAAI-LEAMEAELDLVVCITEGI 134 (340)
Q Consensus 112 v~~~v-~ea~~~Gvk~vvi~t~Gf 134 (340)
....+ ..+.+.+.+.++..+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~ii~~~~~~ 105 (140)
T 1lss_A 82 VNLMSSLLAKSYGINKTIARISEI 105 (140)
T ss_dssp HHHHHHHHHHHTTCCCEEEECSST
T ss_pred HHHHHHHHHHHcCCCEEEEEecCH
Confidence 55444 444455766666666554
No 201
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=95.75 E-value=0.055 Score=53.73 Aligned_cols=102 Identities=22% Similarity=0.187 Sum_probs=66.6
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcCCeEE-EeeCCCCCCcee----------------------cCcccccCHHHhhcc
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMV-GGVTPKKGGTEH----------------------LGLPVFNTVAEAKAE 97 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G~~vv-~~VnP~~~g~~i----------------------~G~p~y~sl~dip~~ 97 (340)
-++++.|+|. |.+|...+.+|.+.|++++ +.+||... +.+ ..+.+..++++..+
T Consensus 7 ~~~~~~vIGl-G~vG~~~A~~La~~G~~V~~~D~~~~kv-~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~- 83 (446)
T 4a7p_A 7 GSVRIAMIGT-GYVGLVSGACFSDFGHEVVCVDKDARKI-ELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVK- 83 (446)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTH-HHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHT-
T ss_pred CceEEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHh-
Confidence 4778888899 9999999999999999955 33444421 111 11344457766665
Q ss_pred CCCcEEEEecChh-----------hHHHHHHHHHHcC-CcEEEEecCCCChhhHHHHHHHH
Q 019500 98 TKANASAIYVPPP-----------FAAAAILEAMEAE-LDLVVCITEGIPQHDMVRVKAAL 146 (340)
Q Consensus 98 ~~vDlavi~vp~~-----------~v~~~v~ea~~~G-vk~vvi~t~Gf~e~~~~~l~~~a 146 (340)
+.|++++++|.. .+.++++...+.- -..+||..++++....+++.+.+
T Consensus 84 -~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l 143 (446)
T 4a7p_A 84 -DADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERII 143 (446)
T ss_dssp -TCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHH
T ss_pred -cCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHH
Confidence 589999997654 4777776665532 23456667787765555555444
No 202
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=95.72 E-value=0.025 Score=54.40 Aligned_cols=63 Identities=16% Similarity=0.151 Sum_probs=48.4
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCce-ecCcccccCHHHhhccCCCcEEEEecCh
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE-HLGLPVFNTVAEAKAETKANASAIYVPP 109 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~-i~G~p~y~sl~dip~~~~vDlavi~vp~ 109 (340)
..|.|+|. |++|+.+++.+..+|++++ ..||.....+ ..|...+.+++++.. ..|++++++|.
T Consensus 174 ktvGIIGl-G~IG~~vA~~l~~~G~~V~-~~dr~~~~~~~~~g~~~~~~l~ell~--~sDvV~l~~Pl 237 (345)
T 4g2n_A 174 RRLGIFGM-GRIGRAIATRARGFGLAIH-YHNRTRLSHALEEGAIYHDTLDSLLG--ASDIFLIAAPG 237 (345)
T ss_dssp CEEEEESC-SHHHHHHHHHHHTTTCEEE-EECSSCCCHHHHTTCEECSSHHHHHH--TCSEEEECSCC
T ss_pred CEEEEEEe-ChhHHHHHHHHHHCCCEEE-EECCCCcchhhhcCCeEeCCHHHHHh--hCCEEEEecCC
Confidence 35667799 9999999999999999876 6777642111 226655579999987 58999999994
No 203
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=95.72 E-value=0.027 Score=54.85 Aligned_cols=98 Identities=13% Similarity=0.043 Sum_probs=60.6
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee--cCc------------------ccccCHHHhhccCCCcE
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH--LGL------------------PVFNTVAEAKAETKANA 102 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i--~G~------------------p~y~sl~dip~~~~vDl 102 (340)
+|.|+|+ |.+|...+..|.+ |++++ .++.+... +.+ .+. ....++.+..+ +.|+
T Consensus 2 kI~VIG~-G~vG~~~A~~La~-G~~V~-~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~--~aDv 76 (402)
T 1dlj_A 2 KIAVAGS-GYVGLSLGVLLSL-QNEVT-IVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYK--EAEL 76 (402)
T ss_dssp EEEEECC-SHHHHHHHHHHTT-TSEEE-EECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHH--HCSE
T ss_pred EEEEECC-CHHHHHHHHHHhC-CCEEE-EEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhc--CCCE
Confidence 5677799 9999999999988 98855 56654200 111 122 33345655444 3899
Q ss_pred EEEecChh-----------hHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHH
Q 019500 103 SAIYVPPP-----------FAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAAL 146 (340)
Q Consensus 103 avi~vp~~-----------~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~a 146 (340)
+++++|+. .+.+++++..+.+-..+|+..+..+....+++.+.+
T Consensus 77 viiavpt~~~~~~~~~dl~~v~~v~~~i~~l~~~~iVV~~ST~~~g~~~~l~~~~ 131 (402)
T 1dlj_A 77 VIIATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLIIKSTIPIGFITEMRQKF 131 (402)
T ss_dssp EEECCCCCEETTTTEECCHHHHHHHHHHHHHCSSCEEEECSCCCTTHHHHHHHHT
T ss_pred EEEecCCCcccCCCCccHHHHHHHHHHHHhhCCCCEEEEeCCCCccHHHHHHHHh
Confidence 99999987 477777776654444556553333333344455443
No 204
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=95.72 E-value=0.042 Score=54.52 Aligned_cols=100 Identities=14% Similarity=0.150 Sum_probs=60.6
Q ss_pred eEEEEeCCCCCcchHHHHHHHHc--CCeEEEeeCCCCCC-ce----------------e-----cCcccccCHHHhhccC
Q 019500 43 TRVICQGITGKNGTFHTEQAIEY--GTKMVGGVTPKKGG-TE----------------H-----LGLPVFNTVAEAKAET 98 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~--G~~vv~~VnP~~~g-~~----------------i-----~G~p~y~sl~dip~~~ 98 (340)
.+|.|+|+ |.+|..++..|.+. |++++ .+|.+... +. + .++....++++...
T Consensus 6 mkI~VIG~-G~mG~~lA~~La~~g~G~~V~-~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~-- 81 (467)
T 2q3e_A 6 KKICCIGA-GYVGGPTCSVIAHMCPEIRVT-VVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIK-- 81 (467)
T ss_dssp CEEEEECC-STTHHHHHHHHHHHCTTSEEE-EECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHH--
T ss_pred cEEEEECC-CHHHHHHHHHHHhcCCCCEEE-EEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHh--
Confidence 46778898 99999999999988 78855 56554200 01 0 13445567766554
Q ss_pred CCcEEEEecChhh---------------HHHHHHHHHHc-CCcEEEEecCCCChhhHHHHHHHH
Q 019500 99 KANASAIYVPPPF---------------AAAAILEAMEA-ELDLVVCITEGIPQHDMVRVKAAL 146 (340)
Q Consensus 99 ~vDlavi~vp~~~---------------v~~~v~ea~~~-Gvk~vvi~t~Gf~e~~~~~l~~~a 146 (340)
+.|++++++|... +.+++++..+. .-..+|+..+..+....+++.+.+
T Consensus 82 ~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l 145 (467)
T 2q3e_A 82 EADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIF 145 (467)
T ss_dssp HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHH
T ss_pred cCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHH
Confidence 4899999987543 34555555543 333455555554433344454444
No 205
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=95.71 E-value=0.043 Score=50.38 Aligned_cols=86 Identities=10% Similarity=0.078 Sum_probs=59.7
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCcee-------cCcccccCHHHhhccCCCcEEEEecCh------
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH-------LGLPVFNTVAEAKAETKANASAIYVPP------ 109 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i-------~G~p~y~sl~dip~~~~vDlavi~vp~------ 109 (340)
.+|+|.|++|..|+.+++.|.+.|++++........ .++ ..+. ..++.++.+ ++|++|-+...
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~Dl~-~~~~~~~~~--~~d~Vih~a~~~~~~~~ 78 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGN-KAINDYEYRVSDYT-LEDLINQLN--DVDAVVHLAATRGSQGK 78 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------CCEEEECCCC-HHHHHHHTT--TCSEEEECCCCCCSSSC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc-ccCCceEEEEcccc-HHHHHHhhc--CCCEEEEccccCCCCCh
Confidence 368889999999999999999999987754433110 111 2333 455666665 69999987543
Q ss_pred --------hhHHHHHHHHHHcCCcEEEEecC
Q 019500 110 --------PFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 110 --------~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
.....+++.|.+.|++.+|.+++
T Consensus 79 ~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 79 ISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp GGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 23467788888899998776665
No 206
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.68 E-value=0.035 Score=55.45 Aligned_cols=106 Identities=10% Similarity=0.125 Sum_probs=68.4
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCCC-cee---cCccc-------ccCHHHhhccCCCcEEEEecCh
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-TEH---LGLPV-------FNTVAEAKAETKANASAIYVPP 109 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~g-~~i---~G~p~-------y~sl~dip~~~~vDlavi~vp~ 109 (340)
..+|+|+|+ |.+|+.+++.|.+. ++++ ..+|++... +++ .++.. +.++.++.. ++|++|.++|.
T Consensus 23 ~k~VlIiGA-GgiG~aia~~L~~~~g~~V-~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~--~~DvVIn~tp~ 98 (467)
T 2axq_A 23 GKNVLLLGS-GFVAQPVIDTLAANDDINV-TVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLA--DNDVVISLIPY 98 (467)
T ss_dssp CEEEEEECC-STTHHHHHHHHHTSTTEEE-EEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHH--TSSEEEECSCG
T ss_pred CCEEEEECC-hHHHHHHHHHHHhCCCCeE-EEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHc--CCCEEEECCch
Confidence 346788898 99999999999987 6764 366654310 111 13221 124445444 59999999999
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEE
Q 019500 110 PFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLV 155 (340)
Q Consensus 110 ~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girvi 155 (340)
....++.+.|++.|++.+- ..-+.+ +..++.+.+ ++.|+.++
T Consensus 99 ~~~~~v~~a~l~~g~~vvd--~~~~~p-~~~~Ll~~A-k~aGv~~i 140 (467)
T 2axq_A 99 TFHPNVVKSAIRTKTDVVT--SSYISP-ALRELEPEI-VKAGITVM 140 (467)
T ss_dssp GGHHHHHHHHHHHTCEEEE--CSCCCH-HHHHHHHHH-HHHTCEEE
T ss_pred hhhHHHHHHHHhcCCEEEE--eecCCH-HHHHHHHHH-HHcCCEEE
Confidence 8878889999999987632 222332 234454544 56777765
No 207
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=95.67 E-value=0.03 Score=53.37 Aligned_cols=103 Identities=14% Similarity=0.094 Sum_probs=62.1
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChhh-HHHHH-HHHH-
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPF-AAAAI-LEAM- 120 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~-v~~~v-~ea~- 120 (340)
+|.|+|. |++|+.+++.+..+|++++ ..||... ......-.|.+++++.. ..|++++++|... ...++ ++..
T Consensus 147 ~vgIiG~-G~IG~~~A~~l~~~G~~V~-~~d~~~~-~~~~~~~~~~~l~ell~--~aDvV~~~~P~~~~t~~li~~~~l~ 221 (333)
T 1dxy_A 147 TVGVMGT-GHIGQVAIKLFKGFGAKVI-AYDPYPM-KGDHPDFDYVSLEDLFK--QSDVIDLHVPGIEQNTHIINEAAFN 221 (333)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCC-SSCCTTCEECCHHHHHH--HCSEEEECCCCCGGGTTSBCHHHHH
T ss_pred EEEEECc-CHHHHHHHHHHHHCCCEEE-EECCCcc-hhhHhccccCCHHHHHh--cCCEEEEcCCCchhHHHHhCHHHHh
Confidence 4667799 9999999999999999966 6776542 11211123568999876 4899999999643 22222 1122
Q ss_pred HcCCcEE-EEecCCCChhhHHHHHHHHhccCCcE
Q 019500 121 EAELDLV-VCITEGIPQHDMVRVKAALNNQSKTR 153 (340)
Q Consensus 121 ~~Gvk~v-vi~t~Gf~e~~~~~l~~~aar~~gir 153 (340)
...-..+ |..+.|- -.+.+.|.+++ ++.++.
T Consensus 222 ~mk~ga~lIn~srg~-~vd~~aL~~aL-~~g~i~ 253 (333)
T 1dxy_A 222 LMKPGAIVINTARPN-LIDTQAMLSNL-KSGKLA 253 (333)
T ss_dssp HSCTTEEEEECSCTT-SBCHHHHHHHH-HTTSEE
T ss_pred hCCCCcEEEECCCCc-ccCHHHHHHHH-HhCCcc
Confidence 2233333 4444442 23445565655 455544
No 208
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=95.67 E-value=0.0096 Score=57.26 Aligned_cols=106 Identities=16% Similarity=0.160 Sum_probs=66.4
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCc--eecCcccccCHHHhhccCCCcEEEEecChh-hHHHHH-H
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT--EHLGLPVFNTVAEAKAETKANASAIYVPPP-FAAAAI-L 117 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~--~i~G~p~y~sl~dip~~~~vDlavi~vp~~-~v~~~v-~ 117 (340)
..+|.|+|. |++|+.+++.+..+|++++ ..||..... .-.|...+.+++++.. ..|++++++|.. ....++ +
T Consensus 168 g~tvGIIG~-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~~~~~g~~~~~~l~ell~--~aDvV~l~~P~t~~t~~li~~ 243 (347)
T 1mx3_A 168 GETLGIIGL-GRVGQAVALRAKAFGFNVL-FYDPYLSDGVERALGLQRVSTLQDLLF--HSDCVTLHCGLNEHNHHLIND 243 (347)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHTTTCEEE-EECTTSCTTHHHHHTCEECSSHHHHHH--HCSEEEECCCCCTTCTTSBSH
T ss_pred CCEEEEEeE-CHHHHHHHHHHHHCCCEEE-EECCCcchhhHhhcCCeecCCHHHHHh--cCCEEEEcCCCCHHHHHHhHH
Confidence 445777799 9999999999999999866 577754211 1246655668999886 489999999974 333334 2
Q ss_pred HHHHc-CCcE-EEEecCCCChhhHHHHHHHHhccCCcE
Q 019500 118 EAMEA-ELDL-VVCITEGIPQHDMVRVKAALNNQSKTR 153 (340)
Q Consensus 118 ea~~~-Gvk~-vvi~t~Gf~e~~~~~l~~~aar~~gir 153 (340)
+.++. .-.. +|..+.|-. .+.++|.+++ ++.++.
T Consensus 244 ~~l~~mk~gailIN~arg~~-vd~~aL~~aL-~~g~i~ 279 (347)
T 1mx3_A 244 FTVKQMRQGAFLVNTARGGL-VDEKALAQAL-KEGRIR 279 (347)
T ss_dssp HHHTTSCTTEEEEECSCTTS-BCHHHHHHHH-HHTSEE
T ss_pred HHHhcCCCCCEEEECCCChH-HhHHHHHHHH-HhCCCc
Confidence 33322 2233 344444432 3344555555 455555
No 209
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=95.57 E-value=0.035 Score=55.64 Aligned_cols=80 Identities=11% Similarity=0.036 Sum_probs=57.1
Q ss_pred eEEEEeCCCCCcchHHHHHHHHc-CC---eEEEeeCCCCCCcee---cCcccc-----c-C----HHHhhccCCCcEEEE
Q 019500 43 TRVICQGITGKNGTFHTEQAIEY-GT---KMVGGVTPKKGGTEH---LGLPVF-----N-T----VAEAKAETKANASAI 105 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~-G~---~vv~~VnP~~~g~~i---~G~p~y-----~-s----l~dip~~~~vDlavi 105 (340)
.+|+|+|+ |.+|+.+++.+.+. ++ +++ .++|...+.++ .|++.- + + ++++..+ .|++|-
T Consensus 14 ~rVlIIGa-GgVG~~va~lla~~~dv~~~~I~-vaD~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~--~DvVIN 89 (480)
T 2ph5_A 14 NRFVILGF-GCVGQALMPLIFEKFDIKPSQVT-IIAAEGTKVDVAQQYGVSFKLQQITPQNYLEVIGSTLEE--NDFLID 89 (480)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHHBCCCGGGEE-EEESSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGGCCT--TCEEEE
T ss_pred CCEEEECc-CHHHHHHHHHHHhCCCCceeEEE-EeccchhhhhHHhhcCCceeEEeccchhHHHHHHHHhcC--CCEEEE
Confidence 46888898 99999999888774 55 344 66775433321 243322 2 2 3334442 499999
Q ss_pred ecChhhHHHHHHHHHHcCCcE
Q 019500 106 YVPPPFAAAAILEAMEAELDL 126 (340)
Q Consensus 106 ~vp~~~v~~~v~ea~~~Gvk~ 126 (340)
..++....++++.|+++|+..
T Consensus 90 ~s~~~~~l~Im~acleaGv~Y 110 (480)
T 2ph5_A 90 VSIGISSLALIILCNQKGALY 110 (480)
T ss_dssp CCSSSCHHHHHHHHHHHTCEE
T ss_pred CCccccCHHHHHHHHHcCCCE
Confidence 999999999999999999997
No 210
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=95.50 E-value=0.021 Score=55.88 Aligned_cols=93 Identities=14% Similarity=0.066 Sum_probs=61.6
Q ss_pred cCCeEEEEeCCCCCcchHHHHHHHHcC--------Ce-EEEeeCC------------------CCC-Cce-ecCcccccC
Q 019500 40 DKNTRVICQGITGKNGTFHTEQAIEYG--------TK-MVGGVTP------------------KKG-GTE-HLGLPVFNT 90 (340)
Q Consensus 40 p~~iaViVvGasgk~G~~v~~~l~~~G--------~~-vv~~VnP------------------~~~-g~~-i~G~p~y~s 90 (340)
+++.||.|+|+ |.+|+.++..|.+.| .+ .+|.-++ ++- |-. -..+.+..+
T Consensus 32 ~~p~KI~ViGa-GsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~d 110 (391)
T 4fgw_A 32 EKPFKVTVIGS-GNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPD 110 (391)
T ss_dssp -CCEEEEEECC-SHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESC
T ss_pred CCCCeEEEECc-CHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCC
Confidence 45667888899 999999988777643 12 2333222 210 000 124556678
Q ss_pred HHHhhccCCCcEEEEecChhhHHHHHHHHHHcC--CcEEEEecCCCC
Q 019500 91 VAEAKAETKANASAIYVPPPFAAAAILEAMEAE--LDLVVCITEGIP 135 (340)
Q Consensus 91 l~dip~~~~vDlavi~vp~~~v~~~v~ea~~~G--vk~vvi~t~Gf~ 135 (340)
+.+..+ +.|++++++|...+.+++++....- -..+|+.+-|+.
T Consensus 111 l~~al~--~ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~~~KGie 155 (391)
T 4fgw_A 111 LIDSVK--DVDIIVFNIPHQFLPRICSQLKGHVDSHVRAISCLKGFE 155 (391)
T ss_dssp HHHHHT--TCSEEEECSCGGGHHHHHHHHTTTSCTTCEEEECCCSCE
T ss_pred HHHHHh--cCCEEEEECChhhhHHHHHHhccccCCCceeEEeccccc
Confidence 888776 5899999999999999999886432 223566777984
No 211
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=95.48 E-value=0.024 Score=54.42 Aligned_cols=90 Identities=13% Similarity=0.006 Sum_probs=62.5
Q ss_pred eEEEEeCCCCCcchHHHHHHHH---c-CCeEEEeeCC-----------------CCCC------ce--ecC--cccc--c
Q 019500 43 TRVICQGITGKNGTFHTEQAIE---Y-GTKMVGGVTP-----------------KKGG------TE--HLG--LPVF--N 89 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~---~-G~~vv~~VnP-----------------~~~g------~~--i~G--~p~y--~ 89 (340)
++|.|+|+ |+.|+.+.+.|.+ . .+++++.-++ +..+ +. +.| ++++ .
T Consensus 3 ikVgI~G~-G~iGr~l~r~l~~~~~~~~~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~ 81 (339)
T 2x5j_O 3 VRVAINGF-GRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHER 81 (339)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTSGGGTEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCS
T ss_pred eEEEEECc-CHHHHHHHHHHHcCCCCCCEEEEEEeCCCCHHHHHHHhcccccCCCCCceEEEcCCeeEECCEEEEEEecC
Confidence 68899999 9999999999887 5 6777743332 1100 00 123 2344 2
Q ss_pred CHHHhhc-cCCCcEEEEecChhhHHHHHHHHHHcCCcEEEEecCC
Q 019500 90 TVAEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVCITEG 133 (340)
Q Consensus 90 sl~dip~-~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~G 133 (340)
+.++++- +.++|+++.|+|.....+.+...++.|+|.+||=.++
T Consensus 82 dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~a 126 (339)
T 2x5j_O 82 SLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPG 126 (339)
T ss_dssp SGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCC
T ss_pred ChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccc
Confidence 4556541 1159999999999999999999999999986654444
No 212
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=95.46 E-value=0.0083 Score=59.64 Aligned_cols=119 Identities=13% Similarity=0.222 Sum_probs=82.7
Q ss_pred ccccCcCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCC---CC-----ceecCcccccCHHHhhccCCCcEEEEe
Q 019500 35 PAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK---GG-----TEHLGLPVFNTVAEAKAETKANASAIY 106 (340)
Q Consensus 35 ~~lf~p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~---~g-----~~i~G~p~y~sl~dip~~~~vDlavi~ 106 (340)
-++|+.+.|+|+ |. |..|+.++.||++.|.+++.++-|.. .. .+-.|..+++ ++|... .-|++++.
T Consensus 32 ~~~lkgK~IaVI--Gy-GsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v~~-~~eA~~--~ADvV~~L 105 (491)
T 3ulk_A 32 ASYLQGKKVVIV--GC-GAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGT-YEELIP--QADLVINL 105 (491)
T ss_dssp TGGGTTSEEEEE--SC-SHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEEEE-HHHHGG--GCSEEEEC
T ss_pred hHHHcCCEEEEe--CC-ChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEecC-HHHHHH--hCCEEEEe
Confidence 367888877666 98 88999999999999999776765431 00 1347888874 777765 48999999
Q ss_pred cChhhHHHHHHHHHHcCC--cEEEEecCCCChhhHHHHHHHHhccCCcEEEccCCCCcc
Q 019500 107 VPPPFAAAAILEAMEAEL--DLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVI 163 (340)
Q Consensus 107 vp~~~v~~~v~ea~~~Gv--k~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc~Gi~ 163 (340)
+|.+...++.++ ++... ...+.|+.||+-... .+ + ..+.-++-++-|.++|-.
T Consensus 106 ~PD~~q~~vy~~-I~p~lk~G~~L~faHGFnI~~~-~i-~-pp~dvdVimVAPKgpG~~ 160 (491)
T 3ulk_A 106 TPDKQHSDVVRT-VQPLMKDGAALGYSHGFNIVEV-GE-Q-IRKDITVVMVAPKCPGTE 160 (491)
T ss_dssp SCGGGHHHHHHH-HGGGSCTTCEEEESSCHHHHTT-CC-C-CCTTSEEEEEEESSCHHH
T ss_pred CChhhHHHHHHH-HHhhCCCCCEEEecCccccccc-cc-c-cCCCcceEEeCCCCCcHH
Confidence 999999988876 66553 356789999952210 00 0 012334667788888744
No 213
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=95.46 E-value=0.028 Score=54.08 Aligned_cols=64 Identities=16% Similarity=0.238 Sum_probs=49.0
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCce---ecCcccccCHHHhhccCCCcEEEEecCh
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE---HLGLPVFNTVAEAKAETKANASAIYVPP 109 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~---i~G~p~y~sl~dip~~~~vDlavi~vp~ 109 (340)
..+|.|+|. |++|+.+++.+..+|++++ ..|++....+ -.|+..+.+++++.. ..|++++++|.
T Consensus 164 gktvGIIG~-G~IG~~vA~~l~~~G~~V~-~~dr~~~~~~~~~~~g~~~~~~l~ell~--~aDvV~l~~Pl 230 (351)
T 3jtm_A 164 GKTIGTVGA-GRIGKLLLQRLKPFGCNLL-YHDRLQMAPELEKETGAKFVEDLNEMLP--KCDVIVINMPL 230 (351)
T ss_dssp TCEEEEECC-SHHHHHHHHHHGGGCCEEE-EECSSCCCHHHHHHHCCEECSCHHHHGG--GCSEEEECSCC
T ss_pred CCEEeEEEe-CHHHHHHHHHHHHCCCEEE-EeCCCccCHHHHHhCCCeEcCCHHHHHh--cCCEEEECCCC
Confidence 345677799 9999999999999999965 6776531111 246666679999987 48999999995
No 214
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=95.45 E-value=0.024 Score=53.52 Aligned_cols=64 Identities=16% Similarity=0.109 Sum_probs=47.4
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCc--eecCcccccCHHHhhccCCCcEEEEecChh
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT--EHLGLPVFNTVAEAKAETKANASAIYVPPP 110 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~--~i~G~p~y~sl~dip~~~~vDlavi~vp~~ 110 (340)
..+|.|+|. |++|+.+++.+..+|++++ .+||..... .-.|.. +.+++++.. ..|++++++|..
T Consensus 142 g~~vgIIG~-G~IG~~~A~~l~~~G~~V~-~~d~~~~~~~~~~~g~~-~~~l~ell~--~aDvVvl~~P~~ 207 (313)
T 2ekl_A 142 GKTIGIVGF-GRIGTKVGIIANAMGMKVL-AYDILDIREKAEKINAK-AVSLEELLK--NSDVISLHVTVS 207 (313)
T ss_dssp TCEEEEESC-SHHHHHHHHHHHHTTCEEE-EECSSCCHHHHHHTTCE-ECCHHHHHH--HCSEEEECCCCC
T ss_pred CCEEEEEee-CHHHHHHHHHHHHCCCEEE-EECCCcchhHHHhcCce-ecCHHHHHh--hCCEEEEeccCC
Confidence 335677799 9999999999999999866 677765211 123554 348888876 489999999954
No 215
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=95.44 E-value=0.048 Score=52.40 Aligned_cols=89 Identities=9% Similarity=0.020 Sum_probs=62.3
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCC---eEEEeeCCCCCCceec--Ccc-cccCHHH-hhccCCCcEEEEecChhhHHHH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGT---KMVGGVTPKKGGTEHL--GLP-VFNTVAE-AKAETKANASAIYVPPPFAAAA 115 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~---~vv~~VnP~~~g~~i~--G~p-~y~sl~d-ip~~~~vDlavi~vp~~~v~~~ 115 (340)
++|.|+|+||-.|..+++.|.++.| ++.....++..|+.+. |.. .+.++++ .. .++|+++.|+|.....+.
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~~~~~~~~~~~~~~~~~--~~~Dvvf~a~~~~~s~~~ 79 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAFRGQEIEVEDAETADP--SGLDIALFSAGSAMSKVQ 79 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEEETTEEEEEEETTTSCC--TTCSEEEECSCHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCceeecCCceEEEeCCHHHh--ccCCEEEECCChHHHHHH
Confidence 5788889999999999998888744 3554455666565542 210 1111111 11 258999999999999999
Q ss_pred HHHHHHcCCcEEEEecCCC
Q 019500 116 ILEAMEAELDLVVCITEGI 134 (340)
Q Consensus 116 v~ea~~~Gvk~vvi~t~Gf 134 (340)
+..+.++|++. |-.++-|
T Consensus 80 a~~~~~~G~~v-ID~Sa~~ 97 (344)
T 3tz6_A 80 APRFAAAGVTV-IDNSSAW 97 (344)
T ss_dssp HHHHHHTTCEE-EECSSTT
T ss_pred HHHHHhCCCEE-EECCCcc
Confidence 99999999974 5677665
No 216
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=95.38 E-value=0.017 Score=54.72 Aligned_cols=64 Identities=9% Similarity=0.143 Sum_probs=48.4
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCC-CCCCce---ecCcccccCHHHhhccCCCcEEEEecChh
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTP-KKGGTE---HLGLPVFNTVAEAKAETKANASAIYVPPP 110 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP-~~~g~~---i~G~p~y~sl~dip~~~~vDlavi~vp~~ 110 (340)
..+|.|+|. |++|+.+++.+..+|++++ .+|| ... .+ -.|.....+++++.. ..|++++++|..
T Consensus 146 g~~vgIIG~-G~IG~~~A~~l~~~G~~V~-~~d~~~~~-~~~~~~~g~~~~~~l~ell~--~aDvVil~~p~~ 213 (320)
T 1gdh_A 146 NKTLGIYGF-GSIGQALAKRAQGFDMDID-YFDTHRAS-SSDEASYQATFHDSLDSLLS--VSQFFSLNAPST 213 (320)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHTTTCEEE-EECSSCCC-HHHHHHHTCEECSSHHHHHH--HCSEEEECCCCC
T ss_pred CCEEEEECc-CHHHHHHHHHHHHCCCEEE-EECCCCcC-hhhhhhcCcEEcCCHHHHHh--hCCEEEEeccCc
Confidence 335677799 9999999999999999866 7787 552 11 146655558988876 489999999964
No 217
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=95.38 E-value=0.038 Score=51.40 Aligned_cols=90 Identities=16% Similarity=0.058 Sum_probs=58.1
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCC-C-cee-cCcccccCHHHhhccCCCcEEEEecCh--------
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKG-G-TEH-LGLPVFNTVAEAKAETKANASAIYVPP-------- 109 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~-g-~~i-~G~p~y~sl~dip~~~~vDlavi~vp~-------- 109 (340)
+..+|+|.|++|.+|+.+++.|.+.|++++........ + ..+ ..+.-..++.++.+ ++|+++-+...
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~A~~~~~~~~~~ 95 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIM--GVSAVLHLGAFMSWAPADR 95 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHT--TCSEEEECCCCCCSSGGGH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHh--CCCEEEECCcccCcchhhH
Confidence 34467888999999999999999999997744332210 0 111 22222334556655 69999876532
Q ss_pred --------hhHHHHHHHHHHcCCcEEEEecC
Q 019500 110 --------PFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 110 --------~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
.....+++.|.+.|++.+|.+++
T Consensus 96 ~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 96 DRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp HHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 12356788888899988777776
No 218
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=95.29 E-value=0.0018 Score=59.77 Aligned_cols=88 Identities=10% Similarity=0.001 Sum_probs=52.2
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ce---ecCcccccCHHHhhccCCCcEEEEecChhhHHHHHHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE---HLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEA 119 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~---i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ea 119 (340)
+|.|+|+ |+||..+.+.|.+. ++++...|++... +. ..|. .+.+++++.+ +.|++++++|+..+.++++++
T Consensus 4 ~I~iIG~-G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~-~~~~~~~~~~--~~DvVilav~~~~~~~v~~~l 78 (276)
T 2i76_A 4 VLNFVGT-GTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGG-KAATLEKHPE--LNGVVFVIVPDRYIKTVANHL 78 (276)
T ss_dssp CCEEESC-CHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCC-CCCSSCCCCC-----CEEECSCTTTHHHHHTTT
T ss_pred eEEEEeC-CHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCC-ccCCHHHHHh--cCCEEEEeCChHHHHHHHHHh
Confidence 5667798 99999999988776 7653355654310 11 2355 6677777654 489999999999988888766
Q ss_pred HHcCCcEEEEecCCCChh
Q 019500 120 MEAELDLVVCITEGIPQH 137 (340)
Q Consensus 120 ~~~Gvk~vvi~t~Gf~e~ 137 (340)
. ..-+.++..+++.+.+
T Consensus 79 ~-~~~~ivi~~s~~~~~~ 95 (276)
T 2i76_A 79 N-LGDAVLVHCSGFLSSE 95 (276)
T ss_dssp C-CSSCCEEECCSSSCGG
T ss_pred c-cCCCEEEECCCCCcHH
Confidence 4 2112334444455543
No 219
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=95.28 E-value=0.024 Score=55.41 Aligned_cols=64 Identities=11% Similarity=0.080 Sum_probs=49.2
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCce---ecCcccccCHHHhhccCCCcEEEEecCh
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE---HLGLPVFNTVAEAKAETKANASAIYVPP 109 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~---i~G~p~y~sl~dip~~~~vDlavi~vp~ 109 (340)
..+|.|+|. |++|+.+++.+..+|++++ ..|+.....+ -.|+..+.+++++.. ..|++++++|.
T Consensus 191 gktvGIIGl-G~IG~~vA~~l~a~G~~V~-~~d~~~~~~~~~~~~G~~~~~~l~ell~--~aDvV~l~~Pl 257 (393)
T 2nac_A 191 AMHVGTVAA-GRIGLAVLRRLAPFDVHLH-YTDRHRLPESVEKELNLTWHATREDMYP--VCDVVTLNCPL 257 (393)
T ss_dssp TCEEEEECC-SHHHHHHHHHHGGGTCEEE-EECSSCCCHHHHHHHTCEECSSHHHHGG--GCSEEEECSCC
T ss_pred CCEEEEEeE-CHHHHHHHHHHHhCCCEEE-EEcCCccchhhHhhcCceecCCHHHHHh--cCCEEEEecCC
Confidence 335677799 9999999999999999866 6776542122 246666678999887 48999999995
No 220
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=95.28 E-value=0.073 Score=52.43 Aligned_cols=105 Identities=11% Similarity=0.088 Sum_probs=64.5
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChhh-HHHHH--HH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPF-AAAAI--LE 118 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~-v~~~v--~e 118 (340)
..+|.|+|. |++|+.+++.+..+|++++ ..||... ....+...+.+++++.. ..|++++++|... ....+ +.
T Consensus 156 gktvGIIGl-G~IG~~vA~~l~~~G~~V~-~yd~~~~-~~~~~~~~~~sl~ell~--~aDvV~lhvPlt~~T~~li~~~~ 230 (416)
T 3k5p_A 156 GKTLGIVGY-GNIGSQVGNLAESLGMTVR-YYDTSDK-LQYGNVKPAASLDELLK--TSDVVSLHVPSSKSTSKLITEAK 230 (416)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECTTCC-CCBTTBEECSSHHHHHH--HCSEEEECCCC-----CCBCHHH
T ss_pred CCEEEEEee-CHHHHHHHHHHHHCCCEEE-EECCcch-hcccCcEecCCHHHHHh--hCCEEEEeCCCCHHHhhhcCHHH
Confidence 345677799 9999999999999999866 6776541 22334555679999987 4899999999743 33333 22
Q ss_pred HHHcCCcEE-EEecCCCChhhHHHHHHHHhccCCcE
Q 019500 119 AMEAELDLV-VCITEGIPQHDMVRVKAALNNQSKTR 153 (340)
Q Consensus 119 a~~~Gvk~v-vi~t~Gf~e~~~~~l~~~aar~~gir 153 (340)
.....-..+ |..+.|-. .+.++|.+++ ++..+.
T Consensus 231 l~~mk~gailIN~aRG~v-vd~~aL~~aL-~~g~i~ 264 (416)
T 3k5p_A 231 LRKMKKGAFLINNARGSD-VDLEALAKVL-QEGHLA 264 (416)
T ss_dssp HHHSCTTEEEEECSCTTS-BCHHHHHHHH-HTTSEE
T ss_pred HhhCCCCcEEEECCCChh-hhHHHHHHHH-HcCCcc
Confidence 223343443 44444532 3344555555 444444
No 221
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=95.26 E-value=0.018 Score=53.20 Aligned_cols=90 Identities=12% Similarity=0.071 Sum_probs=58.2
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHc-----C-CeEEEeeCCCCCCcee---cCcccc--------------cCHHHhhccC
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEY-----G-TKMVGGVTPKKGGTEH---LGLPVF--------------NTVAEAKAET 98 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~-----G-~~vv~~VnP~~~g~~i---~G~p~y--------------~sl~dip~~~ 98 (340)
..+|.|+|+ |.+|......|.+. | +++. .+++...-+.+ .|+.+. .+.+++ +
T Consensus 8 ~m~I~iiG~-G~mG~~~a~~L~~~~~~~~g~~~V~-~~~r~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~-- 82 (317)
T 2qyt_A 8 PIKIAVFGL-GGVGGYYGAMLALRAAATDGLLEVS-WIARGAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEV-G-- 82 (317)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHHHHHTTSSEEEE-EECCHHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHH-C--
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCccccCCCCCEE-EEEcHHHHHHHHhcCCeEEEeCCCCeEEecceEecCcccc-C--
Confidence 357888898 99999999999888 8 7755 56652100111 344332 233333 2
Q ss_pred CCcEEEEecChhhHHHHHHHHHHc-CC-cEEEEecCCCCh
Q 019500 99 KANASAIYVPPPFAAAAILEAMEA-EL-DLVVCITEGIPQ 136 (340)
Q Consensus 99 ~vDlavi~vp~~~v~~~v~ea~~~-Gv-k~vvi~t~Gf~e 136 (340)
+.|++++++|+..+.+++++.... +- ..++.++.|+..
T Consensus 83 ~~D~vil~vk~~~~~~v~~~i~~~l~~~~~iv~~~nG~~~ 122 (317)
T 2qyt_A 83 TVDYILFCTKDYDMERGVAEIRPMIGQNTKILPLLNGADI 122 (317)
T ss_dssp CEEEEEECCSSSCHHHHHHHHGGGEEEEEEEEECSCSSSH
T ss_pred CCCEEEEecCcccHHHHHHHHHhhcCCCCEEEEccCCCCc
Confidence 589999999999998888766442 11 234555778753
No 222
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=95.26 E-value=0.028 Score=53.98 Aligned_cols=62 Identities=16% Similarity=0.181 Sum_probs=47.4
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecCh
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPP 109 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~ 109 (340)
.+|.|+|. |++|+.+++.+..+|++++ ..||... ....+.-.|.+++++.. ..|++++++|-
T Consensus 149 ktvgIiGl-G~IG~~vA~~l~~~G~~V~-~~d~~~~-~~~~~~~~~~~l~ell~--~aDvV~l~~Pl 210 (343)
T 2yq5_A 149 LTVGLIGV-GHIGSAVAEIFSAMGAKVI-AYDVAYN-PEFEPFLTYTDFDTVLK--EADIVSLHTPL 210 (343)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCC-GGGTTTCEECCHHHHHH--HCSEEEECCCC
T ss_pred CeEEEEec-CHHHHHHHHHHhhCCCEEE-EECCChh-hhhhccccccCHHHHHh--cCCEEEEcCCC
Confidence 35667799 9999999999999999866 6777652 22333334569999887 48999999994
No 223
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=95.25 E-value=0.026 Score=53.33 Aligned_cols=96 Identities=16% Similarity=0.171 Sum_probs=60.3
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChhh-HHHHHH-HH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPF-AAAAIL-EA 119 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~-v~~~v~-ea 119 (340)
..+|.|+|. |++|+.+++.+..+|++++ ..||... ... + .+.+++++.. ..|++++++|... ...++. +.
T Consensus 144 g~~vgIIG~-G~IG~~~A~~l~~~G~~V~-~~d~~~~--~~~-~-~~~~l~ell~--~aDvV~l~~p~~~~t~~li~~~~ 215 (311)
T 2cuk_A 144 GLTLGLVGM-GRIGQAVAKRALAFGMRVV-YHARTPK--PLP-Y-PFLSLEELLK--EADVVSLHTPLTPETHRLLNRER 215 (311)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCC--SSS-S-CBCCHHHHHH--HCSEEEECCCCCTTTTTCBCHHH
T ss_pred CCEEEEEEE-CHHHHHHHHHHHHCCCEEE-EECCCCc--ccc-c-ccCCHHHHHh--hCCEEEEeCCCChHHHhhcCHHH
Confidence 335677799 9999999999999999865 6777652 222 3 3678988876 4899999999863 333332 22
Q ss_pred HH-cCCcE-EEEecCCCChhhHHHHHHHH
Q 019500 120 ME-AELDL-VVCITEGIPQHDMVRVKAAL 146 (340)
Q Consensus 120 ~~-~Gvk~-vvi~t~Gf~e~~~~~l~~~a 146 (340)
.+ ..-.. ++..+.|- -.+.+++.+++
T Consensus 216 l~~mk~ga~lin~srg~-~vd~~aL~~aL 243 (311)
T 2cuk_A 216 LFAMKRGAILLNTARGA-LVDTEALVEAL 243 (311)
T ss_dssp HTTSCTTCEEEECSCGG-GBCHHHHHHHH
T ss_pred HhhCCCCcEEEECCCCC-ccCHHHHHHHH
Confidence 22 12222 34444442 22344555555
No 224
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=95.23 E-value=0.028 Score=53.48 Aligned_cols=62 Identities=16% Similarity=0.117 Sum_probs=45.8
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChh
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPP 110 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~ 110 (340)
+|.|+|. |++|+.+++.+..+|++++ .+||... ......-.|.+++++.. ..|++++++|..
T Consensus 148 ~vgIiG~-G~IG~~~A~~l~~~G~~V~-~~d~~~~-~~~~~~~~~~~l~ell~--~aDvV~~~~p~t 209 (331)
T 1xdw_A 148 TVGVVGL-GRIGRVAAQIFHGMGATVI-GEDVFEI-KGIEDYCTQVSLDEVLE--KSDIITIHAPYI 209 (331)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCC-CSCTTTCEECCHHHHHH--HCSEEEECCCCC
T ss_pred EEEEECc-CHHHHHHHHHHHHCCCEEE-EECCCcc-HHHHhccccCCHHHHHh--hCCEEEEecCCc
Confidence 4667799 9999999999999999966 6776542 11211123568988876 489999999863
No 225
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=95.20 E-value=0.049 Score=48.16 Aligned_cols=88 Identities=11% Similarity=0.073 Sum_probs=57.1
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcC-CeEEEee-CCCCCCcee--cCcccc-------cCHHHhhccCCCcEEEEecChh
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYG-TKMVGGV-TPKKGGTEH--LGLPVF-------NTVAEAKAETKANASAIYVPPP 110 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G-~~vv~~V-nP~~~g~~i--~G~p~y-------~sl~dip~~~~vDlavi~vp~~ 110 (340)
+.+|+|.|++|.+|+.+++.|.+.| ++++... ++... .+. .++.++ .++.++.+ .+|++|.+....
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vv~~a~~~ 99 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI-HKPYPTNSQIIMGDVLNHAALKQAMQ--GQDIVYANLTGE 99 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGS-CSSCCTTEEEEECCTTCHHHHHHHHT--TCSEEEEECCST
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhh-cccccCCcEEEEecCCCHHHHHHHhc--CCCEEEEcCCCC
Confidence 3468899999999999999999999 7766332 22211 111 122222 23445554 589998776553
Q ss_pred ----hHHHHHHHHHHcCCcEEEEecC
Q 019500 111 ----FAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 111 ----~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
.+..+++.+.+.|++.+|.+++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 100 DLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred chhHHHHHHHHHHHHcCCCEEEEEec
Confidence 2345677777889988887776
No 226
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=94.19 E-value=0.0033 Score=55.57 Aligned_cols=87 Identities=14% Similarity=0.098 Sum_probs=56.6
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCce--ecCcccccCHHHhhccCCCcEEEEecChhhHHHHHHHHH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE--HLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEAM 120 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~--i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ea~ 120 (340)
.+|.|+|+ |+||+.+++.|.+.|+++. .++++...+. -.|+... ++.++.+ ..|++++++|+..+.+++ +..
T Consensus 20 ~~I~iIG~-G~mG~~la~~L~~~G~~V~-~~~r~~~~~~~~~~g~~~~-~~~~~~~--~aDvVilav~~~~~~~v~-~l~ 93 (201)
T 2yjz_A 20 GVVCIFGT-GDFGKSLGLKMLQCGYSVV-FGSRNPQVSSLLPRGAEVL-CYSEAAS--RSDVIVLAVHREHYDFLA-ELA 93 (201)
Confidence 35667798 9999999999999898754 5565431111 1355544 6666654 589999999998776665 322
Q ss_pred HcC-CcEEEEecCCCC
Q 019500 121 EAE-LDLVVCITEGIP 135 (340)
Q Consensus 121 ~~G-vk~vvi~t~Gf~ 135 (340)
... -+.+|.++.|++
T Consensus 94 ~~~~~~ivI~~~~G~~ 109 (201)
T 2yjz_A 94 DSLKGRVLIDVSNNQK 109 (201)
Confidence 111 124555667875
No 227
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=95.19 E-value=0.11 Score=51.91 Aligned_cols=98 Identities=16% Similarity=0.158 Sum_probs=60.0
Q ss_pred eEEEEeCCCCCcchHHHHHHHHc--CCeEEEeeCCCCCCcee-----c-------------------CcccccCHHHhhc
Q 019500 43 TRVICQGITGKNGTFHTEQAIEY--GTKMVGGVTPKKGGTEH-----L-------------------GLPVFNTVAEAKA 96 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~--G~~vv~~VnP~~~g~~i-----~-------------------G~p~y~sl~dip~ 96 (340)
.+|.|+|+ |.+|...+..|.+. |++++ .+|.+. +.+ . ++....++.+...
T Consensus 10 mkI~VIG~-G~vG~~~A~~La~~g~g~~V~-~~D~~~--~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~ 85 (481)
T 2o3j_A 10 SKVVCVGA-GYVGGPTCAMIAHKCPHITVT-VVDMNT--AKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIA 85 (481)
T ss_dssp CEEEEECC-STTHHHHHHHHHHHCTTSEEE-EECSCH--HHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEE-EEECCH--HHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhh
Confidence 46788899 99999999999887 68865 555432 111 1 2333345555444
Q ss_pred cCCCcEEEEecChh---------------hHHHHHHHHHHc-CCcEEEEecCCCChhhHHHHHHHH
Q 019500 97 ETKANASAIYVPPP---------------FAAAAILEAMEA-ELDLVVCITEGIPQHDMVRVKAAL 146 (340)
Q Consensus 97 ~~~vDlavi~vp~~---------------~v~~~v~ea~~~-Gvk~vvi~t~Gf~e~~~~~l~~~a 146 (340)
+.|++++++|.. .+.++++...+. .-..+|+..+..+....+++.+.+
T Consensus 86 --~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l 149 (481)
T 2o3j_A 86 --EADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCIL 149 (481)
T ss_dssp --HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHH
T ss_pred --cCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHH
Confidence 389999998753 266666665543 334566665555544334454444
No 228
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=95.18 E-value=0.063 Score=49.59 Aligned_cols=88 Identities=10% Similarity=0.010 Sum_probs=55.9
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceec--Ccccc-------cCHHHhhccCCCcEEEEecChh---
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHL--GLPVF-------NTVAEAKAETKANASAIYVPPP--- 110 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~--G~p~y-------~sl~dip~~~~vDlavi~vp~~--- 110 (340)
++|+|.|++|.+|+.+++.|.+.|++++.........+++. ++..+ .++.++.+ ++|++|-+....
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~a~~~~~~ 91 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALR--GLDGVIFSAGYYPSR 91 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTT--TCSEEEEC-------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHc--CCCEEEECCccCcCC
Confidence 47899999999999999999999998774433211101111 22222 23445544 589998876421
Q ss_pred -------------hHHHHHHHHHHcCCcEEEEecC
Q 019500 111 -------------FAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 111 -------------~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
....+++.|.+.|++.+|.+++
T Consensus 92 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 126 (342)
T 2x4g_A 92 PRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126 (342)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 2356778888889887776665
No 229
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=95.16 E-value=0.027 Score=53.61 Aligned_cols=64 Identities=22% Similarity=0.275 Sum_probs=45.8
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ceecCcccccCHHHhhccCCCcEEEEecCh
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEHLGLPVFNTVAEAKAETKANASAIYVPP 109 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i~G~p~y~sl~dip~~~~vDlavi~vp~ 109 (340)
..+|.|+|. |++|+.+++.+..+|++++ ..|+.... +.....-.+.+++++.. ..|++++++|.
T Consensus 137 gktvGIiGl-G~IG~~vA~~l~~~G~~V~-~~dr~~~~~~~~~~~~~~~~l~ell~--~aDvV~l~lPl 201 (324)
T 3evt_A 137 GQQLLIYGT-GQIGQSLAAKASALGMHVI-GVNTTGHPADHFHETVAFTATADALA--TANFIVNALPL 201 (324)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESSCCCCTTCSEEEEGGGCHHHHH--HCSEEEECCCC
T ss_pred CCeEEEECc-CHHHHHHHHHHHhCCCEEE-EECCCcchhHhHhhccccCCHHHHHh--hCCEEEEcCCC
Confidence 335677799 9999999999999999966 56665310 11111223468888886 48999999994
No 230
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=95.13 E-value=0.032 Score=53.33 Aligned_cols=104 Identities=14% Similarity=0.151 Sum_probs=63.3
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCc--eecCcccccCHHHhhccCCCcEEEEecChhh-HHHHH-H
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT--EHLGLPVFNTVAEAKAETKANASAIYVPPPF-AAAAI-L 117 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~--~i~G~p~y~sl~dip~~~~vDlavi~vp~~~-v~~~v-~ 117 (340)
..+|.|+|. |++|+.+++.+..+|++++ ..||..... .-.|+. +.+++++.. ..|++++++|... ...++ +
T Consensus 165 g~tvgIIGl-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~~~~~g~~-~~~l~ell~--~aDvV~l~~P~t~~t~~li~~ 239 (335)
T 2g76_A 165 GKTLGILGL-GRIGREVATRMQSFGMKTI-GYDPIISPEVSASFGVQ-QLPLEEIWP--LCDFITVHTPLLPSTTGLLND 239 (335)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHTTTCEEE-EECSSSCHHHHHHTTCE-ECCHHHHGG--GCSEEEECCCCCTTTTTSBCH
T ss_pred cCEEEEEeE-CHHHHHHHHHHHHCCCEEE-EECCCcchhhhhhcCce-eCCHHHHHh--cCCEEEEecCCCHHHHHhhCH
Confidence 335677799 9999999999999999866 678765211 123544 458999876 4899999999853 33333 2
Q ss_pred HHHH-cCCcEE-EEecCCCChhhHHHHHHHHhccCCc
Q 019500 118 EAME-AELDLV-VCITEGIPQHDMVRVKAALNNQSKT 152 (340)
Q Consensus 118 ea~~-~Gvk~v-vi~t~Gf~e~~~~~l~~~aar~~gi 152 (340)
+..+ ..-..+ |..+.|- -.+.+++.+++ ++.++
T Consensus 240 ~~l~~mk~gailIN~arg~-vvd~~aL~~aL-~~g~i 274 (335)
T 2g76_A 240 NTFAQCKKGVRVVNCARGG-IVDEGALLRAL-QSGQC 274 (335)
T ss_dssp HHHTTSCTTEEEEECSCTT-SBCHHHHHHHH-HHTSE
T ss_pred HHHhhCCCCcEEEECCCcc-ccCHHHHHHHH-HhCCc
Confidence 2222 233343 3344442 23334455544 34433
No 231
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=95.13 E-value=0.016 Score=55.48 Aligned_cols=87 Identities=15% Similarity=0.074 Sum_probs=60.8
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCC-------------CCCc----------e--ecC--ccccc--CH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPK-------------KGGT----------E--HLG--LPVFN--TV 91 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~-------------~~g~----------~--i~G--~p~y~--sl 91 (340)
+++|.|+|+ |+.|+.+.|.+.+. .+++++..+.. ..|+ . +.| ++++. +.
T Consensus 1 mikVgI~G~-G~iGr~l~R~l~~~~~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp 79 (334)
T 3cmc_O 1 AVKVGINGF-GRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDP 79 (334)
T ss_dssp CEEEEEESC-SHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred CeEEEEECC-CHHHHHHHHHHhCCCCeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEEccCcEEECCEEEEEEecCCh
Confidence 368889999 99999999998876 56777443320 0010 0 123 34442 55
Q ss_pred HHhh-ccCCCcEEEEecChhhHHHHHHHHHHcCCcEEEE
Q 019500 92 AEAK-AETKANASAIYVPPPFAAAAILEAMEAELDLVVC 129 (340)
Q Consensus 92 ~dip-~~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi 129 (340)
++++ .+.++|+++.++|.....+.+...++.|+|.+||
T Consensus 80 ~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVI 118 (334)
T 3cmc_O 80 ENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVII 118 (334)
T ss_dssp GGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEE
T ss_pred hhcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEE
Confidence 5664 2125999999999999999999999999988664
No 232
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=95.10 E-value=0.053 Score=53.75 Aligned_cols=104 Identities=15% Similarity=0.127 Sum_probs=64.0
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ce----ecCccc-------ccCHHHhhccCCCcEEEEecChhh
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE----HLGLPV-------FNTVAEAKAETKANASAIYVPPPF 111 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~----i~G~p~-------y~sl~dip~~~~vDlavi~vp~~~ 111 (340)
+|+|+|+ |.+|+.+++.|.+.|++++ .++.+... ++ +.+... +.++.++.+ ++|++|.++|...
T Consensus 5 ~VlViGa-G~iG~~ia~~L~~~G~~V~-v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~--~~DvVIn~a~~~~ 80 (450)
T 1ff9_A 5 SVLMLGS-GFVTRPTLDVLTDSGIKVT-VACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVA--KHDLVISLIPYTF 80 (450)
T ss_dssp EEEEECC-STTHHHHHHHHHTTTCEEE-EEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHT--TSSEEEECCC--C
T ss_pred EEEEECC-CHHHHHHHHHHHhCcCEEE-EEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHc--CCcEEEECCcccc
Confidence 5777794 9999999999998898844 55543200 11 111211 124445554 5999999999887
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEE
Q 019500 112 AAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLV 155 (340)
Q Consensus 112 v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girvi 155 (340)
..++.++|++.|.+.+. . .....+..++.+.+ +++|++++
T Consensus 81 ~~~i~~a~l~~g~~vvd--~-~~~~~~~~~l~~aA-~~aGv~~i 120 (450)
T 1ff9_A 81 HATVIKSAIRQKKHVVT--T-SYVSPAMMELDQAA-KDAGITVM 120 (450)
T ss_dssp HHHHHHHHHHHTCEEEE--S-SCCCHHHHHTHHHH-HHTTCEEE
T ss_pred chHHHHHHHhCCCeEEE--e-ecccHHHHHHHHHH-HHCCCeEE
Confidence 77788889998876532 2 22223344555554 67787755
No 233
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=95.08 E-value=0.028 Score=54.85 Aligned_cols=61 Identities=16% Similarity=0.183 Sum_probs=46.8
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChh
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPP 110 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~ 110 (340)
.|.|+|. |++|+.+++.+..+|++++ ..||.. ....+...+.+++++.. ..|++++++|-.
T Consensus 121 tvGIIGl-G~IG~~vA~~l~a~G~~V~-~~d~~~--~~~~~~~~~~sl~ell~--~aDiV~l~~Plt 181 (381)
T 3oet_A 121 TIGIVGV-GNVGSRLQTRLEALGIRTL-LCDPPR--AARGDEGDFRTLDELVQ--EADVLTFHTPLY 181 (381)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEE-EECHHH--HHTTCCSCBCCHHHHHH--HCSEEEECCCCC
T ss_pred EEEEEeE-CHHHHHHHHHHHHCCCEEE-EECCCh--HHhccCcccCCHHHHHh--hCCEEEEcCcCC
Confidence 4667799 9999999999999999976 677743 22212235779999987 489999999843
No 234
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=95.08 E-value=0.099 Score=47.58 Aligned_cols=88 Identities=23% Similarity=0.075 Sum_probs=57.2
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcC-CeEEEeeC-CCCCC-c--eecCcccc-------cCHHHhhccCCCcEEEEecChh
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYG-TKMVGGVT-PKKGG-T--EHLGLPVF-------NTVAEAKAETKANASAIYVPPP 110 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G-~~vv~~Vn-P~~~g-~--~i~G~p~y-------~sl~dip~~~~vDlavi~vp~~ 110 (340)
.+|+|.|++|..|+.+++.|.+.| ++++.... |.... . .-.|+.++ .++.++.+ ++|.++.+.+..
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~~a~~~ 83 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALN--GAYATFIVTNYW 83 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEEECCCHH
T ss_pred CEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHh--cCCEEEEeCCCC
Confidence 357888999999999999999888 88774432 32200 0 01233222 23445554 599999887531
Q ss_pred ----------hHHHHHHHHHHcCCcEEEEecC
Q 019500 111 ----------FAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 111 ----------~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
....+++.|.+.|++.+|..++
T Consensus 84 ~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~ 115 (299)
T 2wm3_A 84 ESCSQEQEVKQGKLLADLARRLGLHYVVYSGL 115 (299)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred ccccchHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 3456777888889998775443
No 235
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=95.08 E-value=0.028 Score=53.54 Aligned_cols=108 Identities=19% Similarity=0.222 Sum_probs=65.2
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCce--ecCcccccCHHHhhccCCCcEEEEecChh-hHHHHHH-
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE--HLGLPVFNTVAEAKAETKANASAIYVPPP-FAAAAIL- 117 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~--i~G~p~y~sl~dip~~~~vDlavi~vp~~-~v~~~v~- 117 (340)
..+|.|+|. |++|+.+++.+..+|++++ ..||....+. -.|+. +.+++++.. ..|++++++|.. ....++.
T Consensus 146 g~~vgIIG~-G~iG~~vA~~l~~~G~~V~-~~d~~~~~~~~~~~g~~-~~~l~e~l~--~aDiVil~vp~~~~t~~~i~~ 220 (333)
T 2d0i_A 146 GKKVGILGM-GAIGKAIARRLIPFGVKLY-YWSRHRKVNVEKELKAR-YMDIDELLE--KSDIVILALPLTRDTYHIINE 220 (333)
T ss_dssp TCEEEEECC-SHHHHHHHHHHGGGTCEEE-EECSSCCHHHHHHHTEE-ECCHHHHHH--HCSEEEECCCCCTTTTTSBCH
T ss_pred cCEEEEEcc-CHHHHHHHHHHHHCCCEEE-EECCCcchhhhhhcCce-ecCHHHHHh--hCCEEEEcCCCChHHHHHhCH
Confidence 345677799 9999999999999999865 6777652111 13544 348888765 489999999987 3333332
Q ss_pred ---HHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccC
Q 019500 118 ---EAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPN 158 (340)
Q Consensus 118 ---ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPN 158 (340)
...+.| .++..+.|-. .+..++.+++ ++..+.-.|-.
T Consensus 221 ~~~~~mk~g--ilin~srg~~-vd~~aL~~aL-~~~~i~gaglD 260 (333)
T 2d0i_A 221 ERVKKLEGK--YLVNIGRGAL-VDEKAVTEAI-KQGKLKGYATD 260 (333)
T ss_dssp HHHHHTBTC--EEEECSCGGG-BCHHHHHHHH-HTTCBCEEEES
T ss_pred HHHhhCCCC--EEEECCCCcc-cCHHHHHHHH-HcCCceEEEec
Confidence 233445 4455454432 2333454544 34444444433
No 236
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=95.06 E-value=0.013 Score=54.60 Aligned_cols=114 Identities=16% Similarity=0.270 Sum_probs=68.1
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCce---ecCccc--ccCHHHhhccCCCcEEEEecChhhHHHHH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE---HLGLPV--FNTVAEAKAETKANASAIYVPPPFAAAAI 116 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~---i~G~p~--y~sl~dip~~~~vDlavi~vp~~~v~~~v 116 (340)
..+|.|+|+ |++|+.+++.+..+|.+++ .+||.....+ -.|... +.+++++.. ..|++++++|.....+..
T Consensus 155 g~~v~IiG~-G~iG~~~a~~l~~~G~~V~-~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~--~aDvVi~~~p~~~i~~~~ 230 (293)
T 3d4o_A 155 GANVAVLGL-GRVGMSVARKFAALGAKVK-VGARESDLLARIAEMGMEPFHISKAAQELR--DVDVCINTIPALVVTANV 230 (293)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESSHHHHHHHHHTTSEEEEGGGHHHHTT--TCSEEEECCSSCCBCHHH
T ss_pred CCEEEEEee-CHHHHHHHHHHHhCCCEEE-EEECCHHHHHHHHHCCCeecChhhHHHHhc--CCCEEEECCChHHhCHHH
Confidence 345777898 9999999999999999755 6776541011 124443 357777765 589999999986543322
Q ss_pred HHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEE-ccCCCCcccC
Q 019500 117 LEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLV-GPNCPGVIKP 165 (340)
Q Consensus 117 ~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girvi-GPNc~Gi~~p 165 (340)
-+..+.|. .++.++.|-.+.+. +.+ ++.|++++ -||..|.+.|
T Consensus 231 l~~mk~~~-~lin~ar~~~~~~~----~~a-~~~Gv~~~~~~~l~~~v~p 274 (293)
T 3d4o_A 231 LAEMPSHT-FVIDLASKPGGTDF----RYA-EKRGIKALLVPGLPGIVAP 274 (293)
T ss_dssp HHHSCTTC-EEEECSSTTCSBCH----HHH-HHHTCEEEECCCHHHHHCH
T ss_pred HHhcCCCC-EEEEecCCCCCCCH----HHH-HHCCCEEEECCCCCcccCH
Confidence 22333332 33444444333333 222 45677765 4665555544
No 237
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.06 E-value=0.0089 Score=55.76 Aligned_cols=114 Identities=15% Similarity=0.281 Sum_probs=68.1
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCce---ecCccc--ccCHHHhhccCCCcEEEEecChhhHHHHH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE---HLGLPV--FNTVAEAKAETKANASAIYVPPPFAAAAI 116 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~---i~G~p~--y~sl~dip~~~~vDlavi~vp~~~v~~~v 116 (340)
..+|.|+|+ |++|+.+++.+..+|++++ .+||.....+ -.|..+ +.+++++.. ..|++++++|.....+..
T Consensus 157 g~~v~IiG~-G~iG~~~a~~l~~~G~~V~-~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~--~aDvVi~~~p~~~i~~~~ 232 (300)
T 2rir_A 157 GSQVAVLGL-GRTGMTIARTFAALGANVK-VGARSSAHLARITEMGLVPFHTDELKEHVK--DIDICINTIPSMILNQTV 232 (300)
T ss_dssp TSEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESSHHHHHHHHHTTCEEEEGGGHHHHST--TCSEEEECCSSCCBCHHH
T ss_pred CCEEEEEcc-cHHHHHHHHHHHHCCCEEE-EEECCHHHHHHHHHCCCeEEchhhHHHHhh--CCCEEEECCChhhhCHHH
Confidence 345777798 9999999999999999755 6776541011 125443 467888765 589999999986543322
Q ss_pred HHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEE-ccCCCCcccC
Q 019500 117 LEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLV-GPNCPGVIKP 165 (340)
Q Consensus 117 ~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girvi-GPNc~Gi~~p 165 (340)
-+..+.|. .++.++.|-...+. +.+ ++.|++++ -||..|.+.|
T Consensus 233 ~~~mk~g~-~lin~a~g~~~~~~----~~a-~~~G~~~i~~pg~~g~v~~ 276 (300)
T 2rir_A 233 LSSMTPKT-LILDLASRPGGTDF----KYA-EKQGIKALLAPGLPGIVAP 276 (300)
T ss_dssp HTTSCTTC-EEEECSSTTCSBCH----HHH-HHHTCEEEECCCHHHHHCH
T ss_pred HHhCCCCC-EEEEEeCCCCCcCH----HHH-HHCCCEEEECCCCCCcHHH
Confidence 22223332 33444444222333 222 45677765 5666665543
No 238
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=95.02 E-value=0.0098 Score=54.27 Aligned_cols=101 Identities=15% Similarity=0.070 Sum_probs=63.0
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ce---ecCcccccCHHHhhccCCCcEEEEecChhhHH---HHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE---HLGLPVFNTVAEAKAETKANASAIYVPPPFAA---AAI 116 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~---i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~---~~v 116 (340)
+|.|+|+ |.+|+.+++.|.+.|++ +..+|++... ++ -.|.. +.++.++ . +.|+++.++|+...+ +.+
T Consensus 118 ~v~iiG~-G~~g~~~a~~l~~~g~~-v~v~~r~~~~~~~l~~~~~~~-~~~~~~~-~--~~Divi~~tp~~~~~~~~~~l 191 (263)
T 2d5c_A 118 PALVLGA-GGAGRAVAFALREAGLE-VWVWNRTPQRALALAEEFGLR-AVPLEKA-R--EARLLVNATRVGLEDPSASPL 191 (263)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCC-EEEECSSHHHHHHHHHHHTCE-ECCGGGG-G--GCSEEEECSSTTTTCTTCCSS
T ss_pred eEEEECC-cHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhccc-hhhHhhc-c--CCCEEEEccCCCCCCCCCCCC
Confidence 6888898 88999999999999985 4478876410 11 12444 6778887 5 599999999998643 122
Q ss_pred -HHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEE
Q 019500 117 -LEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLV 155 (340)
Q Consensus 117 -~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girvi 155 (340)
.++++.|. .++-++.+ +.+. ++.+.+ ++.|++++
T Consensus 192 ~~~~l~~g~-~viD~~~~-p~~t--~l~~~a-~~~g~~~v 226 (263)
T 2d5c_A 192 PAELFPEEG-AAVDLVYR-PLWT--RFLREA-KAKGLKVQ 226 (263)
T ss_dssp CGGGSCSSS-EEEESCCS-SSSC--HHHHHH-HHTTCEEE
T ss_pred CHHHcCCCC-EEEEeecC-Cccc--HHHHHH-HHCcCEEE
Confidence 23333443 23333333 2222 344444 56788877
No 239
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=94.99 E-value=0.096 Score=47.66 Aligned_cols=85 Identities=15% Similarity=0.165 Sum_probs=57.2
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC--c---------eecCcccc-------cCHHHhhccCCCcEEEE
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG--T---------EHLGLPVF-------NTVAEAKAETKANASAI 105 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g--~---------~i~G~p~y-------~sl~dip~~~~vDlavi 105 (340)
+|+|.|++|..|+.+++.|.+.|++++..+.+.... . .-.|+.++ .++.++.+ ++|.++.
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~ 83 (308)
T 1qyc_A 6 RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK--NVDVVIS 83 (308)
T ss_dssp CEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH--TCSEEEE
T ss_pred EEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc--CCCEEEE
Confidence 578889999999999999999999876444321100 0 01233322 23555554 5999998
Q ss_pred ecCh---hhHHHHHHHHHHcC-CcEEEEec
Q 019500 106 YVPP---PFAAAAILEAMEAE-LDLVVCIT 131 (340)
Q Consensus 106 ~vp~---~~v~~~v~ea~~~G-vk~vvi~t 131 (340)
+.+. .....+++.|.+.| ++.+| ++
T Consensus 84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v-~S 112 (308)
T 1qyc_A 84 TVGSLQIESQVNIIKAIKEVGTVKRFF-PS 112 (308)
T ss_dssp CCCGGGSGGGHHHHHHHHHHCCCSEEE-CS
T ss_pred CCcchhhhhHHHHHHHHHhcCCCceEe-ec
Confidence 8765 34567888888888 99865 44
No 240
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=94.98 E-value=0.032 Score=53.10 Aligned_cols=64 Identities=13% Similarity=0.219 Sum_probs=47.4
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCce--ecCcccccCHHHhhccCCCcEEEEecChhh
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE--HLGLPVFNTVAEAKAETKANASAIYVPPPF 111 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~--i~G~p~y~sl~dip~~~~vDlavi~vp~~~ 111 (340)
.+|.|+|. |++|+.+++.+..+|++++ .+|+....+. -.|+. +.+++++.. ..|++++++|...
T Consensus 151 ~~vgIIG~-G~iG~~iA~~l~~~G~~V~-~~d~~~~~~~~~~~g~~-~~~l~~~l~--~aDvVil~vp~~~ 216 (334)
T 2dbq_A 151 KTIGIIGL-GRIGQAIAKRAKGFNMRIL-YYSRTRKEEVERELNAE-FKPLEDLLR--ESDFVVLAVPLTR 216 (334)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCCHHHHHHHCCE-ECCHHHHHH--HCSEEEECCCCCT
T ss_pred CEEEEEcc-CHHHHHHHHHHHhCCCEEE-EECCCcchhhHhhcCcc-cCCHHHHHh--hCCEEEECCCCCh
Confidence 35677798 9999999999999999865 6777652111 13444 358888766 4899999999865
No 241
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=94.95 E-value=0.095 Score=50.45 Aligned_cols=158 Identities=16% Similarity=0.149 Sum_probs=91.4
Q ss_pred EEEeCCCCCcchHHHH---HHHHc-CCeEEEeeCCCCCCcee-------cCcccccCHHHhhccCCCcEEEEecC-----
Q 019500 45 VICQGITGKNGTFHTE---QAIEY-GTKMVGGVTPKKGGTEH-------LGLPVFNTVAEAKAETKANASAIYVP----- 108 (340)
Q Consensus 45 ViVvGasgk~G~~v~~---~l~~~-G~~vv~~VnP~~~g~~i-------~G~p~y~sl~dip~~~~vDlavi~vp----- 108 (340)
++|.+- |.+|+...| -+.++ ++++++.++....|++. .|+|++.|++++.+. .+|++++.+.
T Consensus 10 ~vi~~~-g~~~~~~aKta~gl~r~~~~~iVgvid~~~~G~d~ge~~g~~~gipi~~~l~~al~~-~~d~lvig~a~~gG~ 87 (349)
T 2obn_A 10 VAILLH-EGTTGTIGKTGLALLRYSEAPIVAVIDRNCAGQSLREITGIYRYVPIVKSVEAALEY-KPQVLVIGIAPKGGG 87 (349)
T ss_dssp EEEECT-TTSSSSSCHHHHHHHHHCCSCEEEEECGGGTTSCHHHHHCCCSCCCEESSHHHHGGG-CCSEEEECCCCCCC-
T ss_pred EEEEeC-CCCCcHHHHHhHHhhhcCCCcEEEEEeCCCCCCcHHHhcCCcCCCCccCCHHHHHhC-CCCEEEEEecCCCCC
Confidence 444454 555544333 34555 78899889877666543 259999999999864 7999999972
Q ss_pred -hhhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCCCCcccCCCcccccCCCC-CCCCC-cEEE
Q 019500 109 -PPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPGECKIGIMPGY-IHKPG-RIGI 185 (340)
Q Consensus 109 -~~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc~Gi~~p~~~~~~~~~~~-~~~~G-~val 185 (340)
++.+.+.+.+|+++|...+- +-...-.+..++.+++ ++ |..++.=.- +|..+... ... .-.++ ++.+
T Consensus 88 l~~~~~~~i~~Al~~G~~Vvs--glh~~l~~~pel~~~A-~~-g~~i~dvr~----pp~~l~~~--~g~~~~v~~k~i~v 157 (349)
T 2obn_A 88 IPDDYWIELKTALQAGMSLVN--GLHTPLANIPDLNALL-QP-GQLIWDVRK----EPANLDVA--SGAARTLPCRRVLT 157 (349)
T ss_dssp SCGGGHHHHHHHHHTTCEEEE--CSSSCCTTCHHHHHHC-CT-TCCEEETTC----CCSSCCCC--CSGGGGCSSEEEEE
T ss_pred CCHHHHHHHHHHHHcCCcEEe--CccchhhCCHHHHHHH-Hc-CCEEEEecc----Cccccccc--ccceeeecceEEEE
Confidence 14667899999999998632 2222223333465554 67 888775331 22122111 110 00122 2444
Q ss_pred EecCh-----HHHHHHHHHHHhCCCCceEEeecCC
Q 019500 186 VSRSG-----TLTYEAVFQTTAVGLGQSTCVGIGG 215 (340)
Q Consensus 186 vSQSG-----~l~~~~~~~~~~~giG~S~~vs~Gn 215 (340)
+.-.- ..+.++...++++|+-..+ +.+|.
T Consensus 158 ~GTD~~VGK~~ts~~L~~~l~~~G~~a~~-~~tgq 191 (349)
T 2obn_A 158 VGTDMAIGKMSTSLELHWAAKLRGWRSKF-LATGQ 191 (349)
T ss_dssp EESSSSSSHHHHHHHHHHHHHHTTCCEEE-ECCSH
T ss_pred cCCCccccceeHHHHHHHHHHhcCCcEEE-Eeccc
Confidence 33322 3345566777888875444 55664
No 242
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=94.93 E-value=0.045 Score=52.22 Aligned_cols=103 Identities=16% Similarity=0.155 Sum_probs=62.6
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCce--ecCcccccCHHHhhccCCCcEEEEecChh-hHHHHH-HH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE--HLGLPVFNTVAEAKAETKANASAIYVPPP-FAAAAI-LE 118 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~--i~G~p~y~sl~dip~~~~vDlavi~vp~~-~v~~~v-~e 118 (340)
.+|.|+|. |++|+.+++.+..+|++++ ..||... .. -.|.. |.+++++.. ..|++++++|.. ....++ ++
T Consensus 142 ~tvgIiG~-G~IG~~vA~~l~~~G~~V~-~~d~~~~-~~~~~~g~~-~~~l~ell~--~aDvV~l~~P~t~~t~~li~~~ 215 (334)
T 2pi1_A 142 LTLGVIGT-GRIGSRVAMYGLAFGMKVL-CYDVVKR-EDLKEKGCV-YTSLDELLK--ESDVISLHVPYTKETHHMINEE 215 (334)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCC-HHHHHTTCE-ECCHHHHHH--HCSEEEECCCCCTTTTTCBCHH
T ss_pred ceEEEECc-CHHHHHHHHHHHHCcCEEE-EECCCcc-hhhHhcCce-ecCHHHHHh--hCCEEEEeCCCChHHHHhhCHH
Confidence 35667799 9999999999999999866 6777652 11 12544 456999886 489999999952 222222 12
Q ss_pred H-HHcCCcEEEE-ecCCCChhhHHHHHHHHhccCCcE
Q 019500 119 A-MEAELDLVVC-ITEGIPQHDMVRVKAALNNQSKTR 153 (340)
Q Consensus 119 a-~~~Gvk~vvi-~t~Gf~e~~~~~l~~~aar~~gir 153 (340)
. ....-..++| .+.|- -.+.+.|.+++ ++.++.
T Consensus 216 ~l~~mk~gailIN~aRg~-~vd~~aL~~aL-~~g~i~ 250 (334)
T 2pi1_A 216 RISLMKDGVYLINTARGK-VVDTDALYRAY-QRGKFS 250 (334)
T ss_dssp HHHHSCTTEEEEECSCGG-GBCHHHHHHHH-HTTCEE
T ss_pred HHhhCCCCcEEEECCCCc-ccCHHHHHHHH-HhCCce
Confidence 2 2233344333 33332 23444555555 455554
No 243
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=94.93 E-value=0.05 Score=49.86 Aligned_cols=92 Identities=10% Similarity=0.105 Sum_probs=55.0
Q ss_pred CcCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCccc-------ccCHHHhhccCCCcEEEEecChhh
Q 019500 39 VDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPV-------FNTVAEAKAETKANASAIYVPPPF 111 (340)
Q Consensus 39 ~p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~-------y~sl~dip~~~~vDlavi~vp~~~ 111 (340)
.+++.+|+|.|++|.+|+.+++.|.+.|++++........ .. .++.. ..++.++.+..++|++|-+.....
T Consensus 9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~ 86 (321)
T 2pk3_A 9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-PNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKSS 86 (321)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCC
T ss_pred ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-ceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcccc
Confidence 4567788999999999999999999999987744332221 11 12221 223444443224899988753211
Q ss_pred ------------------HHHHHHHHHHc-CCcEEEEecC
Q 019500 112 ------------------AAAAILEAMEA-ELDLVVCITE 132 (340)
Q Consensus 112 ------------------v~~~v~ea~~~-Gvk~vvi~t~ 132 (340)
...+++.|.+. +++.+|.+++
T Consensus 87 ~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 126 (321)
T 2pk3_A 87 VKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGS 126 (321)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEE
T ss_pred hhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcc
Confidence 34566666554 5777776665
No 244
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=94.91 E-value=0.061 Score=52.38 Aligned_cols=89 Identities=13% Similarity=0.050 Sum_probs=62.0
Q ss_pred eEEEEeCCCCCcchHHHHHHHHc---CCeEEEeeCC-------------CCCCc---e---------ecC--cccc--cC
Q 019500 43 TRVICQGITGKNGTFHTEQAIEY---GTKMVGGVTP-------------KKGGT---E---------HLG--LPVF--NT 90 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~---G~~vv~~VnP-------------~~~g~---~---------i~G--~p~y--~s 90 (340)
++|.|+|+ |++|+.+++.+.+. ++++++.-++ ...|+ + +.| ++++ .+
T Consensus 3 ikVgInGf-GrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~d 81 (380)
T 2d2i_A 3 IRVAINGF-GRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRN 81 (380)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSC
T ss_pred cEEEEECc-CHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEEEeCCeEEECCeEEEEEecCC
Confidence 68899999 99999999998875 3677754332 00010 1 234 3343 35
Q ss_pred HHHhhc-cCCCcEEEEecChhhHHHHHHHHHHcCCcEEEEecC
Q 019500 91 VAEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 91 l~dip~-~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
.++++- +.++|+++.++|.....+.+...++.|+|.+||=.+
T Consensus 82 p~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~p 124 (380)
T 2d2i_A 82 PLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAP 124 (380)
T ss_dssp GGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSC
T ss_pred hHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEEcCC
Confidence 667651 115999999999999999999999999998664333
No 245
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=94.90 E-value=0.037 Score=52.08 Aligned_cols=63 Identities=14% Similarity=0.144 Sum_probs=46.9
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCc--eecCcccccCHHHhhccCCCcEEEEecChh
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT--EHLGLPVFNTVAEAKAETKANASAIYVPPP 110 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~--~i~G~p~y~sl~dip~~~~vDlavi~vp~~ 110 (340)
.+|.|+|. |++|+.+++.+..+|++++ .+||....+ .-.|+.. .+++++.. ..|++++++|..
T Consensus 143 ~~vgIiG~-G~IG~~~A~~l~~~G~~V~-~~d~~~~~~~~~~~g~~~-~~l~ell~--~aDvV~l~~p~~ 207 (307)
T 1wwk_A 143 KTIGIIGF-GRIGYQVAKIANALGMNIL-LYDPYPNEERAKEVNGKF-VDLETLLK--ESDVVTIHVPLV 207 (307)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCCHHHHHHTTCEE-CCHHHHHH--HCSEEEECCCCS
T ss_pred ceEEEEcc-CHHHHHHHHHHHHCCCEEE-EECCCCChhhHhhcCccc-cCHHHHHh--hCCEEEEecCCC
Confidence 35677799 9999999999999999866 677765211 1235543 47888876 489999999964
No 246
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=94.88 E-value=0.024 Score=54.72 Aligned_cols=90 Identities=14% Similarity=0.079 Sum_probs=62.5
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCC-C--------ce-----------------ecC--ccccc--C
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKG-G--------TE-----------------HLG--LPVFN--T 90 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~-g--------~~-----------------i~G--~p~y~--s 90 (340)
+++|.|+|+ |+.|+.++|.|.+. .+++++.-+|... + ++ +.| ++++. +
T Consensus 17 ~ikVgI~G~-G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~d 95 (354)
T 3cps_A 17 QGTLGINGF-GRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAKD 95 (354)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCSC
T ss_pred ceEEEEECC-CHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecCC
Confidence 468899999 99999999998886 7888855444321 0 01 112 23442 4
Q ss_pred HHHhhc-cCCCcEEEEecChhhHHHHHHHHHHcCCcEEEEecC
Q 019500 91 VAEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 91 l~dip~-~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
.++++- +.++|+++.++|.....+.+...++.|+|.+||=.+
T Consensus 96 p~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~p 138 (354)
T 3cps_A 96 PAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAP 138 (354)
T ss_dssp GGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSC
T ss_pred hHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCC
Confidence 555541 125899999999999999999999999987664333
No 247
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=94.85 E-value=0.077 Score=50.84 Aligned_cols=89 Identities=12% Similarity=0.025 Sum_probs=62.0
Q ss_pred eEEEEeCCCCCcchHHHHHHHHc---CCeEEEeeCCC----------C---CC----------ce--ecC--ccccc--C
Q 019500 43 TRVICQGITGKNGTFHTEQAIEY---GTKMVGGVTPK----------K---GG----------TE--HLG--LPVFN--T 90 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~---G~~vv~~VnP~----------~---~g----------~~--i~G--~p~y~--s 90 (340)
++|.|+|+ |+.|+.+.+.|.+. ++++++.-++. + .| +. +.| ++++. +
T Consensus 3 ikVgI~G~-G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~d 81 (339)
T 3b1j_A 3 IRVAINGF-GRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRN 81 (339)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSC
T ss_pred eEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCCCcEEEcCCeeeecCceEEEEecCC
Confidence 68899999 99999999998876 36777433220 0 00 01 123 34442 5
Q ss_pred HHHhhcc-CCCcEEEEecChhhHHHHHHHHHHcCCcEEEEecC
Q 019500 91 VAEAKAE-TKANASAIYVPPPFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 91 l~dip~~-~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
.++++-. .++|+++.|+|.....+.....++.|++.+||=.+
T Consensus 82 p~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~ 124 (339)
T 3b1j_A 82 PLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAP 124 (339)
T ss_dssp GGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSC
T ss_pred hHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEEeCC
Confidence 6677621 26999999999999999999999999998664333
No 248
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=94.84 E-value=0.027 Score=53.50 Aligned_cols=64 Identities=14% Similarity=0.173 Sum_probs=45.9
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCce---ecCcccccCHHHhhccCCCcEEEEecChh
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE---HLGLPVFNTVAEAKAETKANASAIYVPPP 110 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~---i~G~p~y~sl~dip~~~~vDlavi~vp~~ 110 (340)
..+|.|+|. |++|+.+++.+..+|++++ .+|++....+ -.|+... +++++.. ..|++++++|..
T Consensus 155 g~~vgIIG~-G~iG~~iA~~l~~~G~~V~-~~d~~~~~~~~~~~~g~~~~-~l~e~l~--~aDvVi~~vp~~ 221 (330)
T 2gcg_A 155 QSTVGIIGL-GRIGQAIARRLKPFGVQRF-LYTGRQPRPEEAAEFQAEFV-STPELAA--QSDFIVVACSLT 221 (330)
T ss_dssp TCEEEEECC-SHHHHHHHHHHGGGTCCEE-EEESSSCCHHHHHTTTCEEC-CHHHHHH--HCSEEEECCCCC
T ss_pred CCEEEEECc-CHHHHHHHHHHHHCCCEEE-EECCCCcchhHHHhcCceeC-CHHHHHh--hCCEEEEeCCCC
Confidence 345677799 9999999999999999865 5665431011 1344433 8888765 489999999974
No 249
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=94.83 E-value=0.16 Score=44.55 Aligned_cols=87 Identities=13% Similarity=0.062 Sum_probs=56.3
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCC--eEEEee-CCCCCCce--ecC-------cccccCHHHhhccCCCcEEEEecChh
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGT--KMVGGV-TPKKGGTE--HLG-------LPVFNTVAEAKAETKANASAIYVPPP 110 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~--~vv~~V-nP~~~g~~--i~G-------~p~y~sl~dip~~~~vDlavi~vp~~ 110 (340)
.+|+|.|++|.+|+.+++.|.+.|+ +++... +|... .+ ..+ +.-..++.++.+ ++|++|-+....
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~~ 95 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTF-DEEAYKNVNQEVVDFEKLDDYASAFQ--GHDVGFCCLGTT 95 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCC-CSGGGGGCEEEECCGGGGGGGGGGGS--SCSEEEECCCCC
T ss_pred CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCc-cccccCCceEEecCcCCHHHHHHHhc--CCCEEEECCCcc
Confidence 3578899999999999999999998 866332 23221 11 111 222233444444 589999876432
Q ss_pred ---------------hHHHHHHHHHHcCCcEEEEecC
Q 019500 111 ---------------FAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 111 ---------------~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
....+++.|.+.+++.+|.+++
T Consensus 96 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS 132 (242)
T 2bka_A 96 RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 132 (242)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEcc
Confidence 2345677777888888777776
No 250
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=94.81 E-value=0.054 Score=51.94 Aligned_cols=91 Identities=13% Similarity=-0.005 Sum_probs=62.6
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHc---CCeEEEeeC-C-------------CCCC-----------ce--ecCcc--cc-
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEY---GTKMVGGVT-P-------------KKGG-----------TE--HLGLP--VF- 88 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~---G~~vv~~Vn-P-------------~~~g-----------~~--i~G~p--~y- 88 (340)
+++|.|+|+ |+.|+.+.+.|.+. .+++++ || + +..| +. +.|.+ ++
T Consensus 1 ~ikVgInG~-G~IGr~llR~l~~~~~p~~eiva-Ind~~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~~i~v~~ 78 (337)
T 1rm4_O 1 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVV-INDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVS 78 (337)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCSSCSEEEEE-EECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEEC
T ss_pred CeEEEEECC-CHHHHHHHHHHHhCCCCCeEEEE-EEcCCCHHHHHHHhcccccCCCccceeEEecCCeEEECCeEEEEEe
Confidence 368889999 99999999998876 245663 44 1 0000 11 33422 33
Q ss_pred -cCHHHhhc-cCCCcEEEEecChhhHHHHHHHHHHcCCcEEEEecCCCC
Q 019500 89 -NTVAEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVCITEGIP 135 (340)
Q Consensus 89 -~sl~dip~-~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~Gf~ 135 (340)
.+.++++- +.++|+++.++|.....+.+...++.|+|.++ +++.+.
T Consensus 79 ~~dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~-iSap~r 126 (337)
T 1rm4_O 79 DRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVL-ITAPGK 126 (337)
T ss_dssp CSCGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEE-ESSCCB
T ss_pred cCChhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEE-ECCccc
Confidence 24555541 12589999999999999999999999999855 677665
No 251
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=94.79 E-value=0.058 Score=50.11 Aligned_cols=93 Identities=8% Similarity=0.042 Sum_probs=57.0
Q ss_pred CcCCeEEEEeCCCCCcchHHHHHHHHcC--CeEEEeeCCCC-CC--cee------cCcccc-------cCHHHhhccCCC
Q 019500 39 VDKNTRVICQGITGKNGTFHTEQAIEYG--TKMVGGVTPKK-GG--TEH------LGLPVF-------NTVAEAKAETKA 100 (340)
Q Consensus 39 ~p~~iaViVvGasgk~G~~v~~~l~~~G--~~vv~~VnP~~-~g--~~i------~G~p~y-------~sl~dip~~~~v 100 (340)
..+..+|+|.|++|.+|+.+++.|.+.| ++++ .++... .. ..+ .++..+ .++.++.+..++
T Consensus 21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 99 (346)
T 4egb_A 21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKII-NFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDV 99 (346)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEE-EEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTC
T ss_pred ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEE-EEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCC
Confidence 3456789999999999999999999988 5555 443221 00 011 122222 234455442248
Q ss_pred cEEEEecChh------------------hHHHHHHHHHHcCCcEEEEecC
Q 019500 101 NASAIYVPPP------------------FAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 101 Dlavi~vp~~------------------~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
|++|-+.... ....+++.|.+.|++.+|.+++
T Consensus 100 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 100 QVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp CEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred CEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 9998765321 1356788888889998776664
No 252
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.79 E-value=0.031 Score=52.99 Aligned_cols=91 Identities=14% Similarity=0.046 Sum_probs=57.6
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee-------------cC--------------cccccCHHHh
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH-------------LG--------------LPVFNTVAEA 94 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i-------------~G--------------~p~y~sl~di 94 (340)
.+|.|+|+ |.||..++..+.+.|++++ ..|++... +.. .| +....++++.
T Consensus 7 ~kI~vIGa-G~MG~~iA~~la~~G~~V~-l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~ea 84 (319)
T 2dpo_A 7 GDVLIVGS-GLVGRSWAMLFASGGFRVK-LYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEE-EECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred ceEEEEee-CHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHH
Confidence 35677799 9999999999999999855 55654310 000 12 3456788877
Q ss_pred hccCCCcEEEEecChh--hHHHHHHHHHHcC-CcEEE-EecCCCChh
Q 019500 95 KAETKANASAIYVPPP--FAAAAILEAMEAE-LDLVV-CITEGIPQH 137 (340)
Q Consensus 95 p~~~~vDlavi~vp~~--~v~~~v~ea~~~G-vk~vv-i~t~Gf~e~ 137 (340)
.. +.|+++.++|.+ ...+++++..+.- -..++ -.|++++..
T Consensus 85 v~--~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~ 129 (319)
T 2dpo_A 85 VE--GVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPS 129 (319)
T ss_dssp TT--TEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHH
T ss_pred Hh--cCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHH
Confidence 65 589999999974 3345555544321 22233 356777643
No 253
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=94.77 E-value=0.058 Score=51.11 Aligned_cols=89 Identities=13% Similarity=0.017 Sum_probs=55.4
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcC-CeEEEeeCCCCCCc-ee---cCcccc-------cCHHHhhccCCCcEEEEecCh
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYG-TKMVGGVTPKKGGT-EH---LGLPVF-------NTVAEAKAETKANASAIYVPP 109 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G-~~vv~~VnP~~~g~-~i---~G~p~y-------~sl~dip~~~~vDlavi~vp~ 109 (340)
..+|+|.|++|.+|+.+++.|.+.| ++++.......... .+ .++..+ .++.++.+ ++|++|-+...
T Consensus 32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vih~A~~ 109 (377)
T 2q1s_A 32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQD--EYDYVFHLATY 109 (377)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCS--CCSEEEECCCC
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhh--CCCEEEECCCc
Confidence 4578899999999999999999999 98774433211100 01 122222 12334443 68999987542
Q ss_pred h------------------hHHHHHHHHHHc-CCcEEEEecC
Q 019500 110 P------------------FAAAAILEAMEA-ELDLVVCITE 132 (340)
Q Consensus 110 ~------------------~v~~~v~ea~~~-Gvk~vvi~t~ 132 (340)
. ....+++.|.+. +++.+|.+++
T Consensus 110 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS 151 (377)
T 2q1s_A 110 HGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAA 151 (377)
T ss_dssp SCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred cCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 1 234566677777 8887776665
No 254
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=94.76 E-value=0.043 Score=52.26 Aligned_cols=63 Identities=16% Similarity=0.169 Sum_probs=46.2
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCcee-cCcccccCHHHhhccCCCcEEEEecChh
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH-LGLPVFNTVAEAKAETKANASAIYVPPP 110 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i-~G~p~y~sl~dip~~~~vDlavi~vp~~ 110 (340)
.+|.|+|. |++|+.+++.+..+|++++ ..||... +.. .+.....+++++.. ..|++++++|..
T Consensus 147 ~~vgIiG~-G~IG~~~A~~l~~~G~~V~-~~d~~~~-~~~~~~~~~~~~l~ell~--~aDvV~l~~p~~ 210 (333)
T 1j4a_A 147 QVVGVVGT-GHIGQVFMQIMEGFGAKVI-TYDIFRN-PELEKKGYYVDSLDDLYK--QADVISLHVPDV 210 (333)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCC-HHHHHTTCBCSCHHHHHH--HCSEEEECSCCC
T ss_pred CEEEEEcc-CHHHHHHHHHHHHCCCEEE-EECCCcc-hhHHhhCeecCCHHHHHh--hCCEEEEcCCCc
Confidence 35667799 9999999999999999866 6777652 111 12333348888876 489999999953
No 255
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=94.73 E-value=0.13 Score=46.74 Aligned_cols=83 Identities=17% Similarity=0.161 Sum_probs=56.0
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCC-CCC----c-----e--ecCcccc-------cCHHHhhccCCCcEEE
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPK-KGG----T-----E--HLGLPVF-------NTVAEAKAETKANASA 104 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~-~~g----~-----~--i~G~p~y-------~sl~dip~~~~vDlav 104 (340)
+|+|.|++|..|+.+++.|.+.|++++..+.+. ... + + -.|+.++ .++.++.+ .+|.+|
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi 81 (307)
T 2gas_A 4 KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIK--QVDIVI 81 (307)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEE
T ss_pred EEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh--CCCEEE
Confidence 477889999999999999999999876544322 000 0 0 1233322 23455554 599999
Q ss_pred EecCh---hhHHHHHHHHHHcC-CcEEE
Q 019500 105 IYVPP---PFAAAAILEAMEAE-LDLVV 128 (340)
Q Consensus 105 i~vp~---~~v~~~v~ea~~~G-vk~vv 128 (340)
-+.+. .....+++.|.+.| ++.+|
T Consensus 82 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v 109 (307)
T 2gas_A 82 CAAGRLLIEDQVKIIKAIKEAGNVKKFF 109 (307)
T ss_dssp ECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred ECCcccccccHHHHHHHHHhcCCceEEe
Confidence 88764 45677888888888 99865
No 256
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=94.70 E-value=0.039 Score=53.32 Aligned_cols=65 Identities=15% Similarity=0.226 Sum_probs=49.0
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCe-EEEeeCCCCCCce---ecCcccccCHHHhhccCCCcEEEEecChh
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTK-MVGGVTPKKGGTE---HLGLPVFNTVAEAKAETKANASAIYVPPP 110 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~-vv~~VnP~~~g~~---i~G~p~y~sl~dip~~~~vDlavi~vp~~ 110 (340)
..+|.|+|. |++|+.+++.+..+|++ ++ ..|+.....+ -.|+..+.+++++.. ..|++++++|..
T Consensus 164 g~tvgIIG~-G~IG~~vA~~l~~~G~~~V~-~~d~~~~~~~~~~~~g~~~~~~l~ell~--~aDvV~l~~P~t 232 (364)
T 2j6i_A 164 GKTIATIGA-GRIGYRVLERLVPFNPKELL-YYDYQALPKDAEEKVGARRVENIEELVA--QADIVTVNAPLH 232 (364)
T ss_dssp TCEEEEECC-SHHHHHHHHHHGGGCCSEEE-EECSSCCCHHHHHHTTEEECSSHHHHHH--TCSEEEECCCCS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCcEEE-EECCCccchhHHHhcCcEecCCHHHHHh--cCCEEEECCCCC
Confidence 335677799 99999999999999997 66 6776541111 245555678999886 589999999985
No 257
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=94.69 E-value=0.023 Score=49.37 Aligned_cols=29 Identities=21% Similarity=0.377 Sum_probs=25.7
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEe
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGG 72 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~ 72 (340)
+|+|.|++|.+|+.+++.|.+.|++++..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~ 30 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAV 30 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEE
Confidence 58899999999999999999999987744
No 258
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=94.67 E-value=0.074 Score=51.93 Aligned_cols=110 Identities=14% Similarity=0.063 Sum_probs=66.9
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHc-C-CeEEEe-eCCCCC---------C---ceecCcccccC----------------
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEY-G-TKMVGG-VTPKKG---------G---TEHLGLPVFNT---------------- 90 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~-G-~~vv~~-VnP~~~---------g---~~i~G~p~y~s---------------- 90 (340)
+++|.|+|++|.+|+.+++.+.++ + |++++. .+.+.. + --+.....|.+
T Consensus 4 m~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~ni~~l~~~~~~f~~~~v~v~d~~~~~~l~~~l~~~~~~v~~g~ 83 (388)
T 1r0k_A 4 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGA 83 (388)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESH
T ss_pred ceEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCCCHHHHHHHHHHcCCcEEEEcChHHHHHHHHHhccCCcEEEeCc
Confidence 367888899999999999988875 3 776643 222110 0 00111111211
Q ss_pred --HHHhhccCCCcEEEEecChhhHHHHHHHHHHcCCcEEEEecCCCCh-hhHHHHHHHHhccCCcEEE
Q 019500 91 --VAEAKAETKANASAIYVPPPFAAAAILEAMEAELDLVVCITEGIPQ-HDMVRVKAALNNQSKTRLV 155 (340)
Q Consensus 91 --l~dip~~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~Gf~e-~~~~~l~~~aar~~girvi 155 (340)
+.++.... +|+++.+++.........+|+++|.+.+ +...-.. .....+.+.+ +++|+.++
T Consensus 84 ~~~~el~~~~-iDvVV~ai~G~aGl~ptlaAi~aGK~Vv--lANKE~lv~~G~~l~~~A-~~~gv~li 147 (388)
T 1r0k_A 84 DALVEAAMMG-ADWTMAAIIGCAGLKATLAAIRKGKTVA--LANKESLVSAGGLMIDAV-REHGTTLL 147 (388)
T ss_dssp HHHHHHHTSC-CSEEEECCCSGGGHHHHHHHHHTTSEEE--ECCSHHHHTTHHHHHHHH-HHHTCEEE
T ss_pred cHHHHHHcCC-CCEEEEeCCCHHHHHHHHHHHHCCCEEE--EeCcHHHHhhHHHHHHHH-HHcCCEEE
Confidence 23455444 8999999988778888899999997653 2322110 1234455554 67888874
No 259
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=94.65 E-value=0.13 Score=47.14 Aligned_cols=84 Identities=13% Similarity=0.199 Sum_probs=57.0
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCC-CCC--c--------eecCcccc-------cCHHHhhccCCCcEEE
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPK-KGG--T--------EHLGLPVF-------NTVAEAKAETKANASA 104 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~-~~g--~--------~i~G~p~y-------~sl~dip~~~~vDlav 104 (340)
.+|+|.|++|..|+.+++.|.+.|++++...... ... . .-.|+.++ .++.++.+ .+|.++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~--~~d~vi 82 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLK--QVDIVI 82 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEE
T ss_pred cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHc--CCCEEE
Confidence 3578889999999999999999999876444322 100 0 01233222 23555554 599999
Q ss_pred EecCh---hhHHHHHHHHHHcC-CcEEE
Q 019500 105 IYVPP---PFAAAAILEAMEAE-LDLVV 128 (340)
Q Consensus 105 i~vp~---~~v~~~v~ea~~~G-vk~vv 128 (340)
.+... .....+++.|.+.| ++.+|
T Consensus 83 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (321)
T 3c1o_A 83 SALPFPMISSQIHIINAIKAAGNIKRFL 110 (321)
T ss_dssp ECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred ECCCccchhhHHHHHHHHHHhCCccEEe
Confidence 88764 45677888888999 99865
No 260
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.57 E-value=0.043 Score=46.71 Aligned_cols=85 Identities=14% Similarity=0.205 Sum_probs=50.9
Q ss_pred EEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCCC-ce--ecCcccc-c---C---HHHh-hccCCCcEEEEecChhh
Q 019500 44 RVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-TE--HLGLPVF-N---T---VAEA-KAETKANASAIYVPPPF 111 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~g-~~--i~G~p~y-~---s---l~di-p~~~~vDlavi~vp~~~ 111 (340)
+|+|+|+ |++|..+++.|.+. |++++ .++.+... +. -.|..++ . + +.++ .- .+.|++++++|...
T Consensus 41 ~v~IiG~-G~~G~~~a~~L~~~~g~~V~-vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~-~~ad~vi~~~~~~~ 117 (183)
T 3c85_A 41 QVLILGM-GRIGTGAYDELRARYGKISL-GIEIREEAAQQHRSEGRNVISGDATDPDFWERILDT-GHVKLVLLAMPHHQ 117 (183)
T ss_dssp SEEEECC-SHHHHHHHHHHHHHHCSCEE-EEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSC-CCCCEEEECCSSHH
T ss_pred cEEEECC-CHHHHHHHHHHHhccCCeEE-EEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCC-CCCCEEEEeCCChH
Confidence 5777798 99999999999998 99866 55554310 01 1344432 2 2 2332 11 25899999999654
Q ss_pred H-HHHHHHHHHcC-CcEEEEec
Q 019500 112 A-AAAILEAMEAE-LDLVVCIT 131 (340)
Q Consensus 112 v-~~~v~ea~~~G-vk~vvi~t 131 (340)
. ..++..+.+.+ ...++..+
T Consensus 118 ~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 118 GNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp HHHHHHHHHHHTTCCSEEEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEEE
Confidence 4 34445555556 34444333
No 261
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=94.56 E-value=0.16 Score=46.33 Aligned_cols=84 Identities=17% Similarity=0.155 Sum_probs=56.3
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC--ce--------ecCcccc-------cCHHHhhccCCCcEEEE
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG--TE--------HLGLPVF-------NTVAEAKAETKANASAI 105 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g--~~--------i~G~p~y-------~sl~dip~~~~vDlavi 105 (340)
.+|+|.|++|..|+.+++.|.+.|++++..+...... +. -.|+.++ .++.++.+ ++|.++.
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~ 82 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK--QVDVVIS 82 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT--TCSEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHh--CCCEEEE
Confidence 3578889999999999999999999877444321100 00 1233322 23555554 5999998
Q ss_pred ecCh-------hhHHHHHHHHHHcC-CcEEE
Q 019500 106 YVPP-------PFAAAAILEAMEAE-LDLVV 128 (340)
Q Consensus 106 ~vp~-------~~v~~~v~ea~~~G-vk~vv 128 (340)
+... .....+++.|.+.| ++.+|
T Consensus 83 ~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v 113 (313)
T 1qyd_A 83 ALAGGVLSHHILEQLKLVEAIKEAGNIKRFL 113 (313)
T ss_dssp CCCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred CCccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence 7753 35667888888898 99865
No 262
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=94.56 E-value=0.14 Score=49.70 Aligned_cols=106 Identities=20% Similarity=0.256 Sum_probs=67.4
Q ss_pred eEEEEeCCCCCcchHHHHHHHHc-CCeEEEe---------------eCCCCCCceecCccccc-----------CHHHhh
Q 019500 43 TRVICQGITGKNGTFHTEQAIEY-GTKMVGG---------------VTPKKGGTEHLGLPVFN-----------TVAEAK 95 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~-G~~vv~~---------------VnP~~~g~~i~G~p~y~-----------sl~dip 95 (340)
.+|.|+|.+|.+|+.+++.+.++ .|++++. .+|+. -.+..-..|. .+.++.
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a~~n~~~l~~q~~~f~p~~--v~v~~~~~~~~~l~~~~~G~~~l~el~ 81 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKVKGIRLIGISFHSNLELAFKIVKEFNVKN--VAITGDVEFEDSSINVWKGSHSIEEML 81 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEESSCHHHHHHHHHHHTCCE--EEECSSCCCCCSSSEEEESTTHHHHHH
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEccCCHHHHHHHHHHcCCCE--EEEccHHHHHHHHHHHccCHHHHHHHh
Confidence 45777799999999998888776 6777755 23332 1111212222 123444
Q ss_pred ccCCCcEEEEecChhhHHHHHHHHHHcCCcEEEEecCCCChh---hHHHHHHHHhccCCcEEE
Q 019500 96 AETKANASAIYVPPPFAAAAILEAMEAELDLVVCITEGIPQH---DMVRVKAALNNQSKTRLV 155 (340)
Q Consensus 96 ~~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~---~~~~l~~~aar~~girvi 155 (340)
...++|+++.+++......-..+|+++|.+.+ ++.. |. ....+.+.+ +++|.+++
T Consensus 82 ~~~~~D~Vv~AivG~aGL~ptlaAi~aGK~va--LANK--EsLV~aG~li~~~a-~~~g~~ll 139 (376)
T 3a06_A 82 EALKPDITMVAVSGFSGLRAVLASLEHSKRVC--LANK--ESLVCGGFLVKKKL-KEKGTELI 139 (376)
T ss_dssp HHHCCSEEEECCCSTTHHHHHHHHHHHCSEEE--ECCS--HHHHHHHHHHHHHH-HHHCCEEE
T ss_pred cCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEE--EeCh--HHHHhhHHHHHHHH-HHcCCEEE
Confidence 32248999999999999999999999997653 3443 21 223344444 66777765
No 263
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=94.54 E-value=0.18 Score=47.73 Aligned_cols=90 Identities=8% Similarity=0.009 Sum_probs=57.7
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCcee--cCccc-------ccCHHHhhccCCCcEEEEecChh-
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH--LGLPV-------FNTVAEAKAETKANASAIYVPPP- 110 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i--~G~p~-------y~sl~dip~~~~vDlavi~vp~~- 110 (340)
++.+|+|.|++|.+|+.+++.|.+.|++++............ .++.. ..++.++.+ ++|++|-+....
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~Vih~A~~~~ 105 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTE--GVDHVFNLAADMG 105 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHT--TCSEEEECCCCCC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhC--CCCEEEECceecC
Confidence 456789999999999999999999999877443322110110 12222 223555554 699998875321
Q ss_pred ------------------hHHHHHHHHHHcCCcEEEEecC
Q 019500 111 ------------------FAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 111 ------------------~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
....+++.|.+.+++.+|.+++
T Consensus 106 ~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS 145 (379)
T 2c5a_A 106 GMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 145 (379)
T ss_dssp CHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 1245677788889988776665
No 264
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.50 E-value=0.058 Score=43.20 Aligned_cols=88 Identities=9% Similarity=0.081 Sum_probs=53.4
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ce--ecCcccc-c---CHHHhhc--cCCCcEEEEecChh--hH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPVF-N---TVAEAKA--ETKANASAIYVPPP--FA 112 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~--i~G~p~y-~---sl~dip~--~~~vDlavi~vp~~--~v 112 (340)
+|+|+|+ |.+|+.+++.|.+.|++++ .++++... +. -.|...+ . +.+.+.+ -.++|+++++++.+ ..
T Consensus 8 ~v~I~G~-G~iG~~~a~~l~~~g~~v~-~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~~ 85 (144)
T 2hmt_A 8 QFAVIGL-GRFGGSIVKELHRMGHEVL-AVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQAS 85 (144)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCCE-EEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHHHH
T ss_pred cEEEECC-CHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchHHH
Confidence 4677798 9999999999999998854 44443200 00 0122221 1 2222221 12589999999864 34
Q ss_pred HHHHHHHHHcCCcEEEEecCC
Q 019500 113 AAAILEAMEAELDLVVCITEG 133 (340)
Q Consensus 113 ~~~v~ea~~~Gvk~vvi~t~G 133 (340)
..+...+.+.|.+.++..+.+
T Consensus 86 ~~~~~~~~~~~~~~ii~~~~~ 106 (144)
T 2hmt_A 86 TLTTLLLKELDIPNIWVKAQN 106 (144)
T ss_dssp HHHHHHHHHTTCSEEEEECCS
T ss_pred HHHHHHHHHcCCCeEEEEeCC
Confidence 456677777888876655544
No 265
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=94.46 E-value=0.017 Score=55.59 Aligned_cols=65 Identities=11% Similarity=0.116 Sum_probs=49.6
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCc--eecCcccccCHHHhhccCCCcEEEEecChh
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT--EHLGLPVFNTVAEAKAETKANASAIYVPPP 110 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~--~i~G~p~y~sl~dip~~~~vDlavi~vp~~ 110 (340)
..+|.|+|. |++|+.+++.+..+|++++ ..||....+ .-.|+..+.+++++.. ..|++++++|..
T Consensus 160 g~tvGIIGl-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~~~~~g~~~~~~l~ell~--~aDiV~l~~Plt 226 (352)
T 3gg9_A 160 GQTLGIFGY-GKIGQLVAGYGRAFGMNVL-VWGRENSKERARADGFAVAESKDALFE--QSDVLSVHLRLN 226 (352)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSHHHHHHHHHTTCEECSSHHHHHH--HCSEEEECCCCS
T ss_pred CCEEEEEeE-CHHHHHHHHHHHhCCCEEE-EECCCCCHHHHHhcCceEeCCHHHHHh--hCCEEEEeccCc
Confidence 345677799 9999999999999999876 677753101 1357766679999987 489999999853
No 266
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=94.45 E-value=0.064 Score=48.22 Aligned_cols=85 Identities=19% Similarity=0.263 Sum_probs=55.9
Q ss_pred EEEeCCCCCcchHHHHHHHHc--CCeEEEeeC-CCCCCcee--cCcccc-------cCHHHhhccCCCcEEEEecCh---
Q 019500 45 VICQGITGKNGTFHTEQAIEY--GTKMVGGVT-PKKGGTEH--LGLPVF-------NTVAEAKAETKANASAIYVPP--- 109 (340)
Q Consensus 45 ViVvGasgk~G~~v~~~l~~~--G~~vv~~Vn-P~~~g~~i--~G~p~y-------~sl~dip~~~~vDlavi~vp~--- 109 (340)
|+|.|++|.+|+.+++.|.+. |++++.... |... .++ .++.++ .++.++.+ ++|.++-+...
T Consensus 2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~a~~~~~ 78 (286)
T 2zcu_A 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKA-QALAAQGITVRQADYGDEAALTSALQ--GVEKLLLISSSEVG 78 (286)
T ss_dssp EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTC-HHHHHTTCEEEECCTTCHHHHHHHTT--TCSEEEECC-----
T ss_pred EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhh-hhhhcCCCeEEEcCCCCHHHHHHHHh--CCCEEEEeCCCCch
Confidence 678899999999999999987 888764432 2221 111 122222 23445554 58999877643
Q ss_pred ---hhHHHHHHHHHHcCCcEEEEecC
Q 019500 110 ---PFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 110 ---~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
.....+++.|.+.|++.+|.+++
T Consensus 79 ~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 79 QRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp ---CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 35667788888889988776665
No 267
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=94.43 E-value=0.024 Score=52.49 Aligned_cols=93 Identities=14% Similarity=-0.007 Sum_probs=59.8
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCcee---cCc---ccccCHHHhhccCCCcEEEEecChhhHHHHH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH---LGL---PVFNTVAEAKAETKANASAIYVPPPFAAAAI 116 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i---~G~---p~y~sl~dip~~~~vDlavi~vp~~~v~~~v 116 (340)
.+|.|+|+ |.+|......|.+.|+++. .++++..+-+. .|. ++..+..+... .+.|+++++||+..+.+++
T Consensus 3 mkI~iiGa-Ga~G~~~a~~L~~~g~~V~-~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~D~vilavk~~~~~~~l 79 (294)
T 3g17_A 3 LSVAIIGP-GAVGTTIAYELQQSLPHTT-LIGRHAKTITYYTVPHAPAQDIVVKGYEDVT-NTFDVIIIAVKTHQLDAVI 79 (294)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHHCTTCE-EEESSCEEEEEESSTTSCCEEEEEEEGGGCC-SCEEEEEECSCGGGHHHHG
T ss_pred cEEEEECC-CHHHHHHHHHHHHCCCeEE-EEEeccCcEEEEecCCeeccceecCchHhcC-CCCCEEEEeCCccCHHHHH
Confidence 35677799 9999999999998888744 55544311111 231 12222223221 2589999999999999998
Q ss_pred HHHHHc-CC-cEEEEecCCCChhh
Q 019500 117 LEAMEA-EL-DLVVCITEGIPQHD 138 (340)
Q Consensus 117 ~ea~~~-Gv-k~vvi~t~Gf~e~~ 138 (340)
++.... +- ..++.++.|+..++
T Consensus 80 ~~l~~~l~~~~~iv~~~nGi~~~~ 103 (294)
T 3g17_A 80 PHLTYLAHEDTLIILAQNGYGQLE 103 (294)
T ss_dssp GGHHHHEEEEEEEEECCSSCCCGG
T ss_pred HHHHHhhCCCCEEEEeccCcccHh
Confidence 887654 21 24567788986543
No 268
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=94.40 E-value=0.13 Score=48.70 Aligned_cols=88 Identities=15% Similarity=0.081 Sum_probs=56.9
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeC-CCCCC-cee---cCccc-----c---cCHHHhhccCCCcEEEEecCh-
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVT-PKKGG-TEH---LGLPV-----F---NTVAEAKAETKANASAIYVPP- 109 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~Vn-P~~~g-~~i---~G~p~-----y---~sl~dip~~~~vDlavi~vp~- 109 (340)
+|+|.|++|..|+.+++.|.+.|++++..+. +.... ..+ .++.. + .++.++.+ .+|.++.+...
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~--~~d~Vi~~a~~~ 84 (352)
T 1xgk_A 7 TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFE--GAHLAFINTTSQ 84 (352)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHT--TCSEEEECCCST
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHh--cCCEEEEcCCCC
Confidence 5778899999999999999999998775443 22100 000 12221 1 23444444 58999876643
Q ss_pred -----hhHHHHHHHHHHcC-CcEEEEecCC
Q 019500 110 -----PFAAAAILEAMEAE-LDLVVCITEG 133 (340)
Q Consensus 110 -----~~v~~~v~ea~~~G-vk~vvi~t~G 133 (340)
.....+++.|.+.| ++.+|.+++.
T Consensus 85 ~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~ 114 (352)
T 1xgk_A 85 AGDEIAIGKDLADAAKRAGTIQHYIYSSMP 114 (352)
T ss_dssp TSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred CcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence 23466777888889 9887777764
No 269
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=94.34 E-value=0.046 Score=51.05 Aligned_cols=90 Identities=9% Similarity=0.068 Sum_probs=58.9
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee--cCcccc----------cCHHHhhccCCCcEEEEecCh
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH--LGLPVF----------NTVAEAKAETKANASAIYVPP 109 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i--~G~p~y----------~sl~dip~~~~vDlavi~vp~ 109 (340)
.+|.|+|+ |.+|......|. .|.++. .++++... +.+ .|+.+. ..-.+.. .+.|++++++|+
T Consensus 3 mkI~IiGa-Ga~G~~~a~~L~-~g~~V~-~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~--~~~D~vilavK~ 77 (307)
T 3ego_A 3 LKIGIIGG-GSVGLLCAYYLS-LYHDVT-VVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSIN--SDFDLLVVTVKQ 77 (307)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-TTSEEE-EECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCC--SCCSEEEECCCG
T ss_pred CEEEEECC-CHHHHHHHHHHh-cCCceE-EEECCHHHHHHHHhCCceEecCCCeeccccccccccc--CCCCEEEEEeCH
Confidence 46788899 999999999888 888755 56654300 111 233221 1001212 258999999999
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCChh
Q 019500 110 PFAAAAILEAMEAELDLVVCITEGIPQH 137 (340)
Q Consensus 110 ~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~ 137 (340)
..+.+++++....+-+.++.++.|+..+
T Consensus 78 ~~~~~~l~~l~~~~~~~ivs~~nGi~~~ 105 (307)
T 3ego_A 78 HQLQSVFSSLERIGKTNILFLQNGMGHI 105 (307)
T ss_dssp GGHHHHHHHTTSSCCCEEEECCSSSHHH
T ss_pred HHHHHHHHHhhcCCCCeEEEecCCccHH
Confidence 9999999877554434477788898643
No 270
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=94.33 E-value=0.022 Score=53.54 Aligned_cols=86 Identities=14% Similarity=0.021 Sum_probs=55.9
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCcee------------cCcccccCHHHhhccCCCcEEEEecChh
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH------------LGLPVFNTVAEAKAETKANASAIYVPPP 110 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i------------~G~p~y~sl~dip~~~~vDlavi~vp~~ 110 (340)
.+|.|+|+ |.||.-++.++. .|++++ ..|++. +.. .++....+++++. +.|++|.++|.+
T Consensus 13 ~~V~vIG~-G~MG~~iA~~la-aG~~V~-v~d~~~--~~~~~~~~~l~~~~~~~i~~~~~~~~~~---~aDlVieavpe~ 84 (293)
T 1zej_A 13 MKVFVIGA-GLMGRGIAIAIA-SKHEVV-LQDVSE--KALEAAREQIPEELLSKIEFTTTLEKVK---DCDIVMEAVFED 84 (293)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-TTSEEE-EECSCH--HHHHHHHHHSCGGGGGGEEEESSCTTGG---GCSEEEECCCSC
T ss_pred CeEEEEee-CHHHHHHHHHHH-cCCEEE-EEECCH--HHHHHHHHHHHHHHhCCeEEeCCHHHHc---CCCEEEEcCcCC
Confidence 34566699 999999999999 999855 666654 211 1555567787743 489999999987
Q ss_pred hH--HHHHHHHHHcCCcEEEE--ecCCCChhh
Q 019500 111 FA--AAAILEAMEAELDLVVC--ITEGIPQHD 138 (340)
Q Consensus 111 ~v--~~~v~ea~~~Gvk~vvi--~t~Gf~e~~ 138 (340)
.. ..++.+..+. +..++ -|+.++.++
T Consensus 85 ~~vk~~l~~~l~~~--~~~IlasntSti~~~~ 114 (293)
T 1zej_A 85 LNTKVEVLREVERL--TNAPLCSNTSVISVDD 114 (293)
T ss_dssp HHHHHHHHHHHHTT--CCSCEEECCSSSCHHH
T ss_pred HHHHHHHHHHHhcC--CCCEEEEECCCcCHHH
Confidence 74 3343444333 43233 345666543
No 271
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=94.31 E-value=0.03 Score=54.50 Aligned_cols=63 Identities=17% Similarity=0.134 Sum_probs=47.1
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChhh
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPF 111 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~ 111 (340)
.+|.|+|. |++|+.+++.+..+|++++ ..||... ..-.|. .+.+++++.. ..|++++++|...
T Consensus 117 ~tvGIIGl-G~IG~~vA~~l~~~G~~V~-~~d~~~~-~~~~g~-~~~~l~ell~--~aDvV~l~~Plt~ 179 (380)
T 2o4c_A 117 RTYGVVGA-GQVGGRLVEVLRGLGWKVL-VCDPPRQ-AREPDG-EFVSLERLLA--EADVISLHTPLNR 179 (380)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEE-EECHHHH-HHSTTS-CCCCHHHHHH--HCSEEEECCCCCS
T ss_pred CEEEEEeC-CHHHHHHHHHHHHCCCEEE-EEcCChh-hhccCc-ccCCHHHHHH--hCCEEEEeccCcc
Confidence 35677798 9999999999999999866 6776531 111233 4678999886 4899999998644
No 272
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=94.24 E-value=0.076 Score=50.69 Aligned_cols=91 Identities=16% Similarity=0.067 Sum_probs=62.5
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCCCc--------e-----------------ecC--ccccc--CH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGT--------E-----------------HLG--LPVFN--TV 91 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~g~--------~-----------------i~G--~p~y~--sl 91 (340)
+++|.|+|+ |+.|+.+.|.+.++ .+++++.-+....+. + +.| ++++. +.
T Consensus 1 ~ikVgI~G~-G~iG~~l~R~l~~~~~veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp 79 (330)
T 1gad_O 1 TIKVGINGF-GRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDP 79 (330)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred CeEEEEECc-CHHHHHHHHHHHcCCCeEEEEEcCCCChhHHhHhhcccccCCCCCCeEEEcCCEEEECCEEEEEEEcCCh
Confidence 368889996 99999999998876 567775433211100 0 011 11343 45
Q ss_pred HHhhc-cCCCcEEEEecChhhHHHHHHHHHHcCCcEEEEecCCC
Q 019500 92 AEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVCITEGI 134 (340)
Q Consensus 92 ~dip~-~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~Gf 134 (340)
+++|- ..++|+++.++|.....+.+...++.|+|.+ ++|+.|
T Consensus 80 ~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvV-dlSa~~ 122 (330)
T 1gad_O 80 ANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKV-VMTGPS 122 (330)
T ss_dssp GGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEE-EESSCC
T ss_pred hhCccccccCCEEEECCCccccHHHHHHHHHCCCEEE-EECCCC
Confidence 66641 1259999999999999999999999999985 478777
No 273
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=94.22 E-value=0.18 Score=46.31 Aligned_cols=89 Identities=12% Similarity=0.087 Sum_probs=55.9
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ceec-Cccc-------ccCHHHhhccCCCcEEEEecCh-----
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEHL-GLPV-------FNTVAEAKAETKANASAIYVPP----- 109 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i~-G~p~-------y~sl~dip~~~~vDlavi~vp~----- 109 (340)
+|+|.|++|.+|+.+++.|.+.|++++......... +.+. ++.. ..++.++.++.++|++|-+...
T Consensus 3 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~~~~ 82 (330)
T 2c20_A 3 SILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSLVGV 82 (330)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCCHHH
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccCccc
Confidence 688899999999999999999999877443322100 1111 2221 2234454442358998876532
Q ss_pred -------------hhHHHHHHHHHHcCCcEEEEecC
Q 019500 110 -------------PFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 110 -------------~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
.....+++.|.+.|++.+|.+++
T Consensus 83 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 118 (330)
T 2c20_A 83 SMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSST 118 (330)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCC
Confidence 12345677777889988776665
No 274
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=94.20 E-value=0.11 Score=47.53 Aligned_cols=85 Identities=14% Similarity=0.143 Sum_probs=56.6
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChh------------
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPP------------ 110 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~------------ 110 (340)
.+|+|.|++|.+|+.+++.|.+.|++++. +..+.. .+ +.-..++.++.++.++|++|-+....
T Consensus 4 ~~ilVtGatG~iG~~l~~~L~~~g~~v~~-~~r~~~-~D---~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~ 78 (321)
T 1e6u_A 4 QRVFIAGHRGMVGSAIRRQLEQRGDVELV-LRTRDE-LN---LLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPAD 78 (321)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEE-CCCTTT-CC---TTCHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEE-EecCcc-CC---ccCHHHHHHHHHhcCCCEEEEcCeecCCcchhhhCHHH
Confidence 46889999999999999999999998764 433221 12 22234455555422489998765321
Q ss_pred -------hHHHHHHHHHHcCCcEEEEecC
Q 019500 111 -------FAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 111 -------~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
....+++.|.+.+++.+|.+++
T Consensus 79 ~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 107 (321)
T 1e6u_A 79 FIYQNMMIESNIIHAAHQNDVNKLLFLGS 107 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 2345677888889988776665
No 275
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=94.16 E-value=0.054 Score=51.20 Aligned_cols=31 Identities=29% Similarity=0.508 Sum_probs=26.7
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEee
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGV 73 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~V 73 (340)
.+|+|.|++|.+|+.+++.|.+.|++++...
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~ 59 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLI 59 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEe
Confidence 4688999999999999999999999877443
No 276
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=94.13 E-value=0.22 Score=45.63 Aligned_cols=85 Identities=14% Similarity=0.112 Sum_probs=57.3
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCce------ecCcccc-------cCHHHhhccCCCcEEEEecCh-
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE------HLGLPVF-------NTVAEAKAETKANASAIYVPP- 109 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~------i~G~p~y-------~sl~dip~~~~vDlavi~vp~- 109 (340)
+|+|.|++|..|+.+++.|.+.|++++..+.......+ -.|+.++ .++.++.+ ++|.++.+.+.
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~--~~d~vi~~a~~~ 90 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMK--KVDVVISALAFP 90 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEEECCCGG
T ss_pred eEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHc--CCCEEEECCchh
Confidence 47888999999999999999999987644332110011 1243332 23445554 59999988864
Q ss_pred --hhHHHHHHHHHHcC-CcEEEEec
Q 019500 110 --PFAAAAILEAMEAE-LDLVVCIT 131 (340)
Q Consensus 110 --~~v~~~v~ea~~~G-vk~vvi~t 131 (340)
.....+++.|.+.| ++.+| ++
T Consensus 91 ~~~~~~~l~~aa~~~g~v~~~v-~S 114 (318)
T 2r6j_A 91 QILDQFKILEAIKVAGNIKRFL-PS 114 (318)
T ss_dssp GSTTHHHHHHHHHHHCCCCEEE-CS
T ss_pred hhHHHHHHHHHHHhcCCCCEEE-ee
Confidence 34667888888888 99865 44
No 277
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=94.12 E-value=0.092 Score=50.15 Aligned_cols=90 Identities=12% Similarity=-0.054 Sum_probs=63.0
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCC-------------CCCC----------ce--ecC--ccccc--CHHH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTP-------------KKGG----------TE--HLG--LPVFN--TVAE 93 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP-------------~~~g----------~~--i~G--~p~y~--sl~d 93 (340)
++|.|+|+ |+.|+.+.+.+.+..+++++.-++ +..| +. +.| ++++. +.++
T Consensus 1 ikVgInG~-G~IGr~vlr~l~~~~~evvaind~~~~~~~a~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~ 79 (331)
T 2g82_O 1 MKVGINGF-GRIGRQVFRILHSRGVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKE 79 (331)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGG
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCEEEEEecCCCHHHHhHhhhccccCCCCCceEEEcCCEEEECCEEEEEEecCChhh
Confidence 46888899 999999999887778887743332 1111 11 123 34552 5666
Q ss_pred hhc-cCCCcEEEEecChhhHHHHHHHHHHcCCcEEEEecCC
Q 019500 94 AKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVCITEG 133 (340)
Q Consensus 94 ip~-~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~G 133 (340)
++- +.++|+++.++|.....+.....++.|+|.+||-.++
T Consensus 80 l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps 120 (331)
T 2g82_O 80 IPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPA 120 (331)
T ss_dssp SCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred CcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCC
Confidence 652 1258999999999999999999999999987754443
No 278
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=94.10 E-value=0.064 Score=54.26 Aligned_cols=71 Identities=20% Similarity=0.359 Sum_probs=52.4
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCc--eecCcccccCHHHhhccCCCcEEEEecChh-hHHHHHHH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT--EHLGLPVFNTVAEAKAETKANASAIYVPPP-FAAAAILE 118 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~--~i~G~p~y~sl~dip~~~~vDlavi~vp~~-~v~~~v~e 118 (340)
.+|.|+|. |++|+.+++.+..+|++++ ..||....+ .-.|+... +++++.. ..|++++++|.. ....++.+
T Consensus 143 ~~vgIIG~-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~a~~~g~~~~-~l~e~~~--~aDvV~l~~P~~~~t~~~i~~ 216 (529)
T 1ygy_A 143 KTVGVVGL-GRIGQLVAQRIAAFGAYVV-AYDPYVSPARAAQLGIELL-SLDDLLA--RADFISVHLPKTPETAGLIDK 216 (529)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTTCEEE-EECTTSCHHHHHHHTCEEC-CHHHHHH--HCSEEEECCCCSTTTTTCBCH
T ss_pred CEEEEEee-CHHHHHHHHHHHhCCCEEE-EECCCCChhHHHhcCcEEc-CHHHHHh--cCCEEEECCCCchHHHHHhCH
Confidence 35667799 9999999999999999866 678764211 12355544 8888876 489999999987 66666654
No 279
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=94.05 E-value=0.27 Score=42.01 Aligned_cols=88 Identities=19% Similarity=0.178 Sum_probs=57.1
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCC--eEEEeeCCCCCCceecCcccc-cCHHHhh---ccCCCcEEEEecChh------
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGT--KMVGGVTPKKGGTEHLGLPVF-NTVAEAK---AETKANASAIYVPPP------ 110 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~--~vv~~VnP~~~g~~i~G~p~y-~sl~dip---~~~~vDlavi~vp~~------ 110 (340)
.+|+|.|++|..|+.+++.|.+.|+ +++ .+..+.. ....++..+ -++.+.. +.. +|++|-+....
T Consensus 6 ~~vlVtGatG~iG~~l~~~l~~~g~~~~V~-~~~r~~~-~~~~~~~~~~~D~~~~~~~~~~~-~d~vi~~a~~~~~~~~~ 82 (215)
T 2a35_A 6 KRVLLAGATGLTGEHLLDRILSEPTLAKVI-APARKAL-AEHPRLDNPVGPLAELLPQLDGS-IDTAFCCLGTTIKEAGS 82 (215)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEE-CCBSSCC-CCCTTEECCBSCHHHHGGGCCSC-CSEEEECCCCCHHHHSS
T ss_pred ceEEEECCCcHHHHHHHHHHHhCCCCCeEE-EEeCCCc-ccCCCceEEeccccCHHHHHHhh-hcEEEECeeeccccCCC
Confidence 4688899999999999999999987 766 4443321 112233322 2554432 222 79998876432
Q ss_pred ----------hHHHHHHHHHHcCCcEEEEecCC
Q 019500 111 ----------FAAAAILEAMEAELDLVVCITEG 133 (340)
Q Consensus 111 ----------~v~~~v~ea~~~Gvk~vvi~t~G 133 (340)
....+++.|.+.|++.+|.+++.
T Consensus 83 ~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~ 115 (215)
T 2a35_A 83 EEAFRAVDFDLPLAVGKRALEMGARHYLVVSAL 115 (215)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred HHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCc
Confidence 34557778888899887766663
No 280
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=94.04 E-value=0.057 Score=51.45 Aligned_cols=86 Identities=17% Similarity=0.080 Sum_probs=57.0
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCe---EEEeeCCCCCCce--ecC--ccccc-CHHHhhccCCCcEEEEecChhhHHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTK---MVGGVTPKKGGTE--HLG--LPVFN-TVAEAKAETKANASAIYVPPPFAAAA 115 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~---vv~~VnP~~~g~~--i~G--~p~y~-sl~dip~~~~vDlavi~vp~~~v~~~ 115 (340)
+|.|+||+|..|+.+++.|.+.++. ++..-..+..|+. +.| ++++. +.++. ++|+++.|+|.....+.
T Consensus 2 kVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~~~g~~i~v~~~~~~~~----~~DvV~~a~g~~~s~~~ 77 (331)
T 2yv3_A 2 RVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLAFRGEEIPVEPLPEGPL----PVDLVLASAGGGISRAK 77 (331)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEEETTEEEEEEECCSSCC----CCSEEEECSHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEEEcCceEEEEeCChhhc----CCCEEEECCCccchHHH
Confidence 5778899999999999998865443 3222232222222 222 22322 11121 48999999999999999
Q ss_pred HHHHHHcCCcEEEEecCCC
Q 019500 116 ILEAMEAELDLVVCITEGI 134 (340)
Q Consensus 116 v~ea~~~Gvk~vvi~t~Gf 134 (340)
+..+.+.|++. |..++-|
T Consensus 78 a~~~~~~G~~v-Id~s~~~ 95 (331)
T 2yv3_A 78 ALVWAEGGALV-VDNSSAW 95 (331)
T ss_dssp HHHHHHTTCEE-EECSSSS
T ss_pred HHHHHHCCCEE-EECCCcc
Confidence 99999999974 5566665
No 281
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=94.00 E-value=0.17 Score=46.60 Aligned_cols=91 Identities=10% Similarity=0.052 Sum_probs=57.5
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeC-CCCCCc-----------ee----cCcccccCHHHhhccCCCcEEEE
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVT-PKKGGT-----------EH----LGLPVFNTVAEAKAETKANASAI 105 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~Vn-P~~~g~-----------~i----~G~p~y~sl~dip~~~~vDlavi 105 (340)
..+|+|.|++|-+|+.+++.|.+.|++++.... +....+ .+ ..+.-..++.++.+..++|++|-
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 84 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIH 84 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEE
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEE
Confidence 346889999999999999999999999774322 221100 00 11112223555554336899887
Q ss_pred ecCh------------------hhHHHHHHHHHHcCCcEEEEecC
Q 019500 106 YVPP------------------PFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 106 ~vp~------------------~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
+... .....+++.|.+.+++.+|.+++
T Consensus 85 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 85 FAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 6531 12345677888889988777765
No 282
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=93.97 E-value=0.16 Score=47.45 Aligned_cols=85 Identities=14% Similarity=0.105 Sum_probs=57.7
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCc-e--------ecCccc-------ccCHHHhhccCCCcEEEEec
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT-E--------HLGLPV-------FNTVAEAKAETKANASAIYV 107 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~-~--------i~G~p~-------y~sl~dip~~~~vDlavi~v 107 (340)
+|+|.|++|..|+.+++.|.+.|++++..+....... . -.++.+ ..++.++.++.++|++|-+.
T Consensus 12 ~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~a 91 (346)
T 3i6i_A 12 RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVSTV 91 (346)
T ss_dssp CEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEECC
T ss_pred eEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEECC
Confidence 5788899999999999999999998775544321000 0 012222 23455555433699999887
Q ss_pred Ch---hhHHHHHHHHHHcC-CcEEE
Q 019500 108 PP---PFAAAAILEAMEAE-LDLVV 128 (340)
Q Consensus 108 p~---~~v~~~v~ea~~~G-vk~vv 128 (340)
.. .....+++.|.+.| ++.++
T Consensus 92 ~~~n~~~~~~l~~aa~~~g~v~~~v 116 (346)
T 3i6i_A 92 GGESILDQIALVKAMKAVGTIKRFL 116 (346)
T ss_dssp CGGGGGGHHHHHHHHHHHCCCSEEE
T ss_pred chhhHHHHHHHHHHHHHcCCceEEe
Confidence 65 45567888888999 99865
No 283
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.82 E-value=0.27 Score=40.51 Aligned_cols=87 Identities=11% Similarity=-0.019 Sum_probs=50.8
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC--cee-----cCccccc-------CHHHhhccCCCcEEEEecCh
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG--TEH-----LGLPVFN-------TVAEAKAETKANASAIYVPP 109 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g--~~i-----~G~p~y~-------sl~dip~~~~vDlavi~vp~ 109 (340)
+|+|+|+ |+.|+.+++.|.+.|++++ .++++... +.+ .|++++. .+.+..- .+.|+++++++.
T Consensus 5 ~vlI~G~-G~vG~~la~~L~~~g~~V~-vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i-~~ad~vi~~~~~ 81 (153)
T 1id1_A 5 HFIVCGH-SILAINTILQLNQRGQNVT-VISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGI-DRCRAILALSDN 81 (153)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCEE-EEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTT-TTCSEEEECSSC
T ss_pred cEEEECC-CHHHHHHHHHHHHCCCCEE-EEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcCh-hhCCEEEEecCC
Confidence 4677798 9999999999999999866 55553100 011 1333321 2333311 258999999987
Q ss_pred hhHHHHHHH-HHHc-CCcEEEEecCC
Q 019500 110 PFAAAAILE-AMEA-ELDLVVCITEG 133 (340)
Q Consensus 110 ~~v~~~v~e-a~~~-Gvk~vvi~t~G 133 (340)
+..-..+.. +-+. +...++....+
T Consensus 82 d~~n~~~~~~a~~~~~~~~ii~~~~~ 107 (153)
T 1id1_A 82 DADNAFVVLSAKDMSSDVKTVLAVSD 107 (153)
T ss_dssp HHHHHHHHHHHHHHTSSSCEEEECSS
T ss_pred hHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 655444433 3344 55554544433
No 284
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=93.82 E-value=0.069 Score=51.21 Aligned_cols=87 Identities=14% Similarity=0.176 Sum_probs=57.6
Q ss_pred eEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCCCc----eecCccccc--------------------CHHHhhcc
Q 019500 43 TRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGT----EHLGLPVFN--------------------TVAEAKAE 97 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~g~----~i~G~p~y~--------------------sl~dip~~ 97 (340)
++|.|+|+ |++|+.+++.+.+. ++++++..+....-. ...|..+|. +..+++.
T Consensus 3 ikVgI~G~-G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~- 80 (343)
T 2yyy_A 3 AKVLINGY-GSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIE- 80 (343)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGG-
T ss_pred eEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhcc-
Confidence 68889999 99999999998876 678775443221000 011223322 2233333
Q ss_pred CCCcEEEEecChhhHHHHHH-HHHHcCCcEEEEecCCC
Q 019500 98 TKANASAIYVPPPFAAAAIL-EAMEAELDLVVCITEGI 134 (340)
Q Consensus 98 ~~vDlavi~vp~~~v~~~v~-ea~~~Gvk~vvi~t~Gf 134 (340)
++|+++.++|.....+..+ .++++|.+ ++ .+.+.
T Consensus 81 -~vDiV~eatg~~~s~~~a~~~~l~aG~~-VI-~sap~ 115 (343)
T 2yyy_A 81 -DADIVVDGAPKKIGKQNLENIYKPHKVK-AI-LQGGE 115 (343)
T ss_dssp -GCSEEEECCCTTHHHHHHHHTTTTTTCE-EE-ECTTS
T ss_pred -CCCEEEECCCccccHHHHHHHHHHCCCE-EE-ECCCc
Confidence 5899999999998888885 88999965 34 46554
No 285
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.79 E-value=0.058 Score=44.14 Aligned_cols=74 Identities=16% Similarity=0.240 Sum_probs=47.6
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCcee-----cCcccc-cC------HHHhhccCCCcEEEEecChhh
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH-----LGLPVF-NT------VAEAKAETKANASAIYVPPPF 111 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i-----~G~p~y-~s------l~dip~~~~vDlavi~vp~~~ 111 (340)
+|+|+|+ |++|+.+++.|.+.|++++ .++.+. +.+ .|++++ .+ +.+..- .+.|++++++|.+.
T Consensus 9 ~viIiG~-G~~G~~la~~L~~~g~~v~-vid~~~--~~~~~~~~~g~~~i~gd~~~~~~l~~a~i-~~ad~vi~~~~~~~ 83 (140)
T 3fwz_A 9 HALLVGY-GRVGSLLGEKLLASDIPLV-VIETSR--TRVDELRERGVRAVLGNAANEEIMQLAHL-ECAKWLILTIPNGY 83 (140)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCEE-EEESCH--HHHHHHHHTTCEEEESCTTSHHHHHHTTG-GGCSEEEECCSCHH
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCCEE-EEECCH--HHHHHHHHcCCCEEECCCCCHHHHHhcCc-ccCCEEEEECCChH
Confidence 4677799 9999999999999999866 565543 211 355433 22 232211 25899999999765
Q ss_pred HH-HHHHHHHHc
Q 019500 112 AA-AAILEAMEA 122 (340)
Q Consensus 112 v~-~~v~ea~~~ 122 (340)
.- .++..+.+.
T Consensus 84 ~n~~~~~~a~~~ 95 (140)
T 3fwz_A 84 EAGEIVASARAK 95 (140)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 43 344444444
No 286
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=93.77 E-value=0.42 Score=47.12 Aligned_cols=105 Identities=13% Similarity=0.146 Sum_probs=65.1
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCcee-----cCccccc-CHHHhhc-------------cCCCcEE
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH-----LGLPVFN-TVAEAKA-------------ETKANAS 103 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i-----~G~p~y~-sl~dip~-------------~~~vDla 103 (340)
.+.-|+|. |.+|...+.+|.+.|++++ ++|.+. +.+ ...|.|. .++++.. ..+.|++
T Consensus 12 ~~~~ViGl-GyvGlp~A~~La~~G~~V~-~~D~~~--~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvv 87 (431)
T 3ojo_A 12 SKLTVVGL-GYIGLPTSIMFAKHGVDVL-GVDINQ--QTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVF 87 (431)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEE-EECSCH--HHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEE
T ss_pred CccEEEee-CHHHHHHHHHHHHCCCEEE-EEECCH--HHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEE
Confidence 35566799 9999999999999999966 555443 221 2345553 4554310 1258999
Q ss_pred EEecChhh------------HHHHHHHHHHc-CCcEEEEecCCCChhhHHHHHHHHhccCC
Q 019500 104 AIYVPPPF------------AAAAILEAMEA-ELDLVVCITEGIPQHDMVRVKAALNNQSK 151 (340)
Q Consensus 104 vi~vp~~~------------v~~~v~ea~~~-Gvk~vvi~t~Gf~e~~~~~l~~~aar~~g 151 (340)
++++|... +..+.+...+. .-..+||..+..+....+++.+.+.++.|
T Consensus 88 ii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g 148 (431)
T 3ojo_A 88 IIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLG 148 (431)
T ss_dssp EECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHHTTT
T ss_pred EEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHHHcC
Confidence 99998865 45555544442 23456777888876655555443223344
No 287
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=93.75 E-value=0.049 Score=50.12 Aligned_cols=68 Identities=16% Similarity=0.105 Sum_probs=50.1
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ce---ecCcccccCHHHhhccCCCcEEEEecChhhHH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE---HLGLPVFNTVAEAKAETKANASAIYVPPPFAA 113 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~---i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~ 113 (340)
..+|+|+|+ |.+|+.+++.|.+.|++ +..+|++... ++ -.|+.+++++.++.+ +.|++|.++|+...+
T Consensus 129 ~~~v~iiGa-G~~g~aia~~L~~~g~~-V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~--~aDiVi~atp~~~~~ 200 (275)
T 2hk9_A 129 EKSILVLGA-GGASRAVIYALVKEGAK-VFLWNRTKEKAIKLAQKFPLEVVNSPEEVID--KVQVIVNTTSVGLKD 200 (275)
T ss_dssp GSEEEEECC-SHHHHHHHHHHHHHTCE-EEEECSSHHHHHHHTTTSCEEECSCGGGTGG--GCSEEEECSSTTSST
T ss_pred CCEEEEECc-hHHHHHHHHHHHHcCCE-EEEEECCHHHHHHHHHHcCCeeehhHHhhhc--CCCEEEEeCCCCCCC
Confidence 446788898 99999999999999985 4478876410 11 235666767777765 489999999988643
No 288
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=93.74 E-value=0.12 Score=50.05 Aligned_cols=105 Identities=11% Similarity=0.109 Sum_probs=64.1
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCc--eecCcccccCHHHhhccCCCcEEEEecChh-hHHHHH-H
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT--EHLGLPVFNTVAEAKAETKANASAIYVPPP-FAAAAI-L 117 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~--~i~G~p~y~sl~dip~~~~vDlavi~vp~~-~v~~~v-~ 117 (340)
..+|.|+|. |++|+.+++.+..+|++++ ..||....+ .-.|+. +.+++++.. ..|++++++|.. .+..++ +
T Consensus 176 gktvGIIGl-G~IG~~vA~~l~~fG~~V~-~~d~~~~~~~~~~~g~~-~~~l~ell~--~aDvV~l~~Plt~~T~~li~~ 250 (365)
T 4hy3_A 176 GSEIGIVGF-GDLGKALRRVLSGFRARIR-VFDPWLPRSMLEENGVE-PASLEDVLT--KSDFIFVVAAVTSENKRFLGA 250 (365)
T ss_dssp SSEEEEECC-SHHHHHHHHHHTTSCCEEE-EECSSSCHHHHHHTTCE-ECCHHHHHH--SCSEEEECSCSSCC---CCCH
T ss_pred CCEEEEecC-CcccHHHHHhhhhCCCEEE-EECCCCCHHHHhhcCee-eCCHHHHHh--cCCEEEEcCcCCHHHHhhcCH
Confidence 335677799 9999999999999999866 677764111 124554 568999987 589999999964 233333 2
Q ss_pred HHHH-cCCcEE-EEecCCCChhhHHHHHHHHhccCCcE
Q 019500 118 EAME-AELDLV-VCITEGIPQHDMVRVKAALNNQSKTR 153 (340)
Q Consensus 118 ea~~-~Gvk~v-vi~t~Gf~e~~~~~l~~~aar~~gir 153 (340)
+.++ .+-..+ |..+.| +--+.+.|.+++ ++..+.
T Consensus 251 ~~l~~mk~gailIN~aRG-~~vde~aL~~aL-~~g~i~ 286 (365)
T 4hy3_A 251 EAFSSMRRGAAFILLSRA-DVVDFDALMAAV-SSGHIV 286 (365)
T ss_dssp HHHHTSCTTCEEEECSCG-GGSCHHHHHHHH-HTTSSE
T ss_pred HHHhcCCCCcEEEECcCC-chhCHHHHHHHH-HcCCce
Confidence 2222 233333 444444 223445566655 455565
No 289
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=93.70 E-value=0.12 Score=48.76 Aligned_cols=87 Identities=16% Similarity=0.165 Sum_probs=58.4
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCC-------CCcee--------cCcccccCHHHhhccCCCcEEEEec
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK-------GGTEH--------LGLPVFNTVAEAKAETKANASAIYV 107 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~-------~g~~i--------~G~p~y~sl~dip~~~~vDlavi~v 107 (340)
.+|.|+|+ |.+|...+..|.+.|+++. .+++.. .|-.+ ..+++..+.+++. +.|++++++
T Consensus 4 mkI~IiGa-G~~G~~~a~~L~~~g~~V~-~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~D~Vilav 78 (335)
T 3ghy_A 4 TRICIVGA-GAVGGYLGARLALAGEAIN-VLARGATLQALQTAGLRLTEDGATHTLPVRATHDAAALG---EQDVVIVAV 78 (335)
T ss_dssp CCEEEESC-CHHHHHHHHHHHHTTCCEE-EECCHHHHHHHHHTCEEEEETTEEEEECCEEESCHHHHC---CCSEEEECC
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCEEE-EEEChHHHHHHHHCCCEEecCCCeEEEeeeEECCHHHcC---CCCEEEEeC
Confidence 35677799 9999999999999898755 555421 00111 1123456777763 489999999
Q ss_pred ChhhHHHHHHHHHHc-C-CcEEEEecCCC
Q 019500 108 PPPFAAAAILEAMEA-E-LDLVVCITEGI 134 (340)
Q Consensus 108 p~~~v~~~v~ea~~~-G-vk~vvi~t~Gf 134 (340)
|+..+.+++++.... + -..++.++.|+
T Consensus 79 k~~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 79 KAPALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp CHHHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred CchhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 999888887765432 1 13456678896
No 290
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=93.68 E-value=0.25 Score=45.96 Aligned_cols=90 Identities=13% Similarity=0.091 Sum_probs=57.5
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee------------cCccc-------ccCHHHhhccCCC
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH------------LGLPV-------FNTVAEAKAETKA 100 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i------------~G~p~-------y~sl~dip~~~~v 100 (340)
+..+|+|.|++|.+|+.+++.|.+.|++++......... +.. .++.. ..++.++.+ ++
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~ 103 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--GV 103 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--TC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc--CC
Confidence 345788999999999999999999999877443311100 000 12222 223555554 59
Q ss_pred cEEEEecChh------------------hHHHHHHHHHHcCCcEEEEecC
Q 019500 101 NASAIYVPPP------------------FAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 101 Dlavi~vp~~------------------~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
|++|-+.... ....+++.|.+.|++.+|.+++
T Consensus 104 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 153 (352)
T 1sb8_A 104 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 153 (352)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 9999876421 1245677788889988776665
No 291
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=93.65 E-value=0.063 Score=48.45 Aligned_cols=83 Identities=16% Similarity=0.102 Sum_probs=55.2
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChh------------
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPP------------ 110 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~------------ 110 (340)
++|+|.|++|.+|+.+++.|.+.|++++ .++... .++ .-..++.++.+..++|++|-+....
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~V~-~~~r~~--~D~---~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~ 79 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYDIY-PFDKKL--LDI---TNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLA 79 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEEEE-EECTTT--SCT---TCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCEEE-Eecccc--cCC---CCHHHHHHHHHhcCCCEEEECCcccChHHHhcCHHHH
Confidence 3788999999999999999999899877 444332 122 2233455555422589998764321
Q ss_pred ------hHHHHHHHHHHcCCcEEEEecC
Q 019500 111 ------FAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 111 ------~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
....+++.|.+.|++ +|.+++
T Consensus 80 ~~~n~~~~~~l~~~~~~~~~~-~v~~SS 106 (287)
T 3sc6_A 80 YVINAIGARNVAVASQLVGAK-LVYIST 106 (287)
T ss_dssp HHHHTHHHHHHHHHHHHHTCE-EEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCe-EEEEch
Confidence 134578888888997 454554
No 292
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=93.58 E-value=0.059 Score=51.28 Aligned_cols=63 Identities=22% Similarity=0.234 Sum_probs=47.1
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCce---ecCcccccCHHHhhccCCCcEEEEecCh
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE---HLGLPVFNTVAEAKAETKANASAIYVPP 109 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~---i~G~p~y~sl~dip~~~~vDlavi~vp~ 109 (340)
..+|.|+|. |++|+.+++.+..+|++++ ..||.....+ -.|+. |.+++++.. ..|++++++|.
T Consensus 145 g~tvGIIG~-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~~~~~~g~~-~~~l~ell~--~aDvV~l~~P~ 210 (330)
T 4e5n_A 145 NATVGFLGM-GAIGLAMADRLQGWGATLQ-YHEAKALDTQTEQRLGLR-QVACSELFA--SSDFILLALPL 210 (330)
T ss_dssp TCEEEEECC-SHHHHHHHHHTTTSCCEEE-EECSSCCCHHHHHHHTEE-ECCHHHHHH--HCSEEEECCCC
T ss_pred CCEEEEEee-CHHHHHHHHHHHHCCCEEE-EECCCCCcHhHHHhcCce-eCCHHHHHh--hCCEEEEcCCC
Confidence 345677799 9999999999999999866 6777541121 23554 458999887 48999999994
No 293
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=93.50 E-value=0.22 Score=46.00 Aligned_cols=90 Identities=14% Similarity=0.086 Sum_probs=56.5
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeC-CCCCC---ceecCcccc-------cCHHHhhccCCCcEEEEecCh--
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVT-PKKGG---TEHLGLPVF-------NTVAEAKAETKANASAIYVPP-- 109 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~Vn-P~~~g---~~i~G~p~y-------~sl~dip~~~~vDlavi~vp~-- 109 (340)
.+|+|.|++|.+|+.+++.|.+.|++++.... +.... .++.++..+ .++.++.++.++|++|-+...
T Consensus 21 ~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~~ 100 (330)
T 2pzm_A 21 MRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAAYK 100 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECCccCC
Confidence 36888999999999999999999999774443 21100 111222222 234444431148999887532
Q ss_pred -------------hhHHHHHHHHHHcCCcEEEEecC
Q 019500 110 -------------PFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 110 -------------~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
.....+++.|.+.|++.+|.+++
T Consensus 101 ~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 136 (330)
T 2pzm_A 101 DPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQT 136 (330)
T ss_dssp CTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred CccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 12356777888889888776665
No 294
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=93.46 E-value=0.12 Score=46.39 Aligned_cols=30 Identities=13% Similarity=0.145 Sum_probs=25.4
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeC
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVT 74 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~Vn 74 (340)
+|+|.|++|.+|+.+++.|.+.|++++ .++
T Consensus 4 ~ilVtGatG~iG~~l~~~L~~~g~~V~-~~~ 33 (267)
T 3ay3_A 4 RLLVTGAAGGVGSAIRPHLGTLAHEVR-LSD 33 (267)
T ss_dssp EEEEESTTSHHHHHHGGGGGGTEEEEE-ECC
T ss_pred eEEEECCCCHHHHHHHHHHHhCCCEEE-EEe
Confidence 578889999999999999998898866 444
No 295
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=93.34 E-value=0.22 Score=49.61 Aligned_cols=88 Identities=15% Similarity=0.074 Sum_probs=53.5
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChh-----------
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPP----------- 110 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~----------- 110 (340)
..+|+|.|++|.+|+.+++.|.+.|++++..+......+.+.+-.. ..+.+..+ ++|++|-+....
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~v~~d~~-~~~~~~l~--~~D~Vih~A~~~~~~~~~~~~~~ 223 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPL-NPASDLLD--GADVLVHLAGEPIFGRFNDSHKE 223 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTCEECCTT-SCCTTTTT--TCSEEEECCCC-----CCGGGHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccceeeccc-chhHHhcC--CCCEEEECCCCccccccchhHHH
Confidence 5678999999999999999999999997755432221122222111 22333333 589998765321
Q ss_pred --------hHHHHHHH-HHHcCCcEEEEecC
Q 019500 111 --------FAAAAILE-AMEAELDLVVCITE 132 (340)
Q Consensus 111 --------~v~~~v~e-a~~~Gvk~vvi~t~ 132 (340)
....+++. |.+.+++.+|.+++
T Consensus 224 ~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS 254 (516)
T 3oh8_A 224 AIRESRVLPTKFLAELVAESTQCTTMISASA 254 (516)
T ss_dssp HHHHHTHHHHHHHHHHHHHCSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCEEEEeCc
Confidence 13445565 34457877665554
No 296
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=93.31 E-value=0.08 Score=49.66 Aligned_cols=68 Identities=21% Similarity=0.092 Sum_probs=49.9
Q ss_pred CcCCeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCCC-ce---ecC--cccccCHHHhhccCCCcEEEEecCh
Q 019500 39 VDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-TE---HLG--LPVFNTVAEAKAETKANASAIYVPP 109 (340)
Q Consensus 39 ~p~~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~g-~~---i~G--~p~y~sl~dip~~~~vDlavi~vp~ 109 (340)
.++..+|.|+|+ |.+|+.+++++.+. |++.+...|++... ++ -.+ +..+.+++++.+ ..|+++.++|.
T Consensus 132 ~~~~~~igiIG~-G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~--~aDiVi~atp~ 206 (312)
T 2i99_A 132 PPSSEVLCILGA-GVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVA--GADVIITVTLA 206 (312)
T ss_dssp CTTCCEEEEECC-SHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHT--TCSEEEECCCC
T ss_pred CCCCcEEEEECC-cHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHh--cCCEEEEEeCC
Confidence 345667888899 99999999998875 88555577776410 11 124 667889998876 58999999995
No 297
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=93.30 E-value=0.13 Score=46.53 Aligned_cols=84 Identities=13% Similarity=0.079 Sum_probs=55.4
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChh-----------
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPP----------- 110 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~----------- 110 (340)
..+|+|.|++|.+|+.+++.|.+.|++++ .++.+. .++ .-..++.++.+..++|++|-+....
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~-~~~r~~--~Dl---~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~ 85 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKNVEVI-PTDVQD--LDI---TNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDL 85 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSSEEEE-EECTTT--CCT---TCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHH
T ss_pred cceEEEECCCChHHHHHHHHHHhCCCeEE-eccCcc--CCC---CCHHHHHHHHHhcCCCEEEECCccCCHHHHhcCHHH
Confidence 56788999999999999999999998877 444332 122 2233455554422489998775321
Q ss_pred -------hHHHHHHHHHHcCCcEEEEecC
Q 019500 111 -------FAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 111 -------~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
....+++.|.+.|+ .+|.+++
T Consensus 86 ~~~~nv~~~~~l~~a~~~~~~-~iv~~SS 113 (292)
T 1vl0_A 86 AYKINAIGPKNLAAAAYSVGA-EIVQIST 113 (292)
T ss_dssp HHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCC-eEEEech
Confidence 13567778888888 4455554
No 298
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.27 E-value=0.4 Score=47.94 Aligned_cols=101 Identities=13% Similarity=0.131 Sum_probs=59.0
Q ss_pred cccccCc--CCeEEEEeCCCCCcchHHHHHHHHc-CC-eEE-EeeCCCCCCcee--------------------------
Q 019500 34 APAVFVD--KNTRVICQGITGKNGTFHTEQAIEY-GT-KMV-GGVTPKKGGTEH-------------------------- 82 (340)
Q Consensus 34 l~~lf~p--~~iaViVvGasgk~G~~v~~~l~~~-G~-~vv-~~VnP~~~g~~i-------------------------- 82 (340)
|...+.. +..+|.|+|+ |.+|..++..|.+. |+ +++ +-+|+.+....+
T Consensus 8 ~~~~~~~~~~~mkIaVIGl-G~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~ 86 (478)
T 3g79_A 8 LEKLLKERGPIKKIGVLGM-GYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVK 86 (478)
T ss_dssp HHHHHHHHCSCCEEEEECC-STTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHH
T ss_pred HHHHHhhcCCCCEEEEECc-CHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcc
Confidence 5555533 2457888899 99999999999999 99 855 234444000011
Q ss_pred cC-cccccCHHHhhccCCCcEEEEecChhh------------HHHHHHHHHHc-CCcEEEEecCCCChhh
Q 019500 83 LG-LPVFNTVAEAKAETKANASAIYVPPPF------------AAAAILEAMEA-ELDLVVCITEGIPQHD 138 (340)
Q Consensus 83 ~G-~p~y~sl~dip~~~~vDlavi~vp~~~------------v~~~v~ea~~~-Gvk~vvi~t~Gf~e~~ 138 (340)
.| +.+-.+ .+... +.|++++++|... +..+.+...+. .-..+||..+.++...
T Consensus 87 ~g~l~~ttd-~ea~~--~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgt 153 (478)
T 3g79_A 87 AGKFECTPD-FSRIS--ELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGT 153 (478)
T ss_dssp TTCEEEESC-GGGGG--GCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTT
T ss_pred cCCeEEeCc-HHHHh--cCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHH
Confidence 11 122223 23333 4899999998753 44455555442 2233566777776543
No 299
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=93.26 E-value=0.31 Score=45.12 Aligned_cols=92 Identities=18% Similarity=0.200 Sum_probs=56.7
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCc-ee---cCcccc-------cCHHHhhccCCCcEEEEecCh
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT-EH---LGLPVF-------NTVAEAKAETKANASAIYVPP 109 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~-~i---~G~p~y-------~sl~dip~~~~vDlavi~vp~ 109 (340)
+..+|+|.|++|.+|+.+++.|.+.|++++.......... .+ .++..+ .++.++.+..++|++|-+...
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~ 99 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAAS 99 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECcee
Confidence 3457889999999999999999999998774433211001 11 122222 234444431238998876532
Q ss_pred ---------------hhHHHHHHHHHHcCCcEEEEecC
Q 019500 110 ---------------PFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 110 ---------------~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
.....+++.|.+.|++.+|.+++
T Consensus 100 ~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 137 (333)
T 2q1w_A 100 YKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQT 137 (333)
T ss_dssp CSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred cCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 12456777888888877776664
No 300
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=93.19 E-value=0.36 Score=43.74 Aligned_cols=88 Identities=8% Similarity=-0.059 Sum_probs=55.2
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCC----CCceecC----cccccCHHHhhccCCCcEEEEecCh----
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK----GGTEHLG----LPVFNTVAEAKAETKANASAIYVPP---- 109 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~----~g~~i~G----~p~y~sl~dip~~~~vDlavi~vp~---- 109 (340)
+.+|+|.|++|.+|+.+++.|.+.|++++....... ....+.. -.+---..|+. ++|+++-+...
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---~~d~vi~~a~~~~~~ 83 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS---DVRLVYHLASHKSVP 83 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT---TEEEEEECCCCCCHH
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc---cCCEEEECCccCChH
Confidence 456889999999999999999999998774433211 0011111 01111233443 47888866532
Q ss_pred -------------hhHHHHHHHHHHcCCcEEEEecC
Q 019500 110 -------------PFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 110 -------------~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
.....+++.|.+.|++.+|.+++
T Consensus 84 ~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS 119 (321)
T 3vps_A 84 RSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGST 119 (321)
T ss_dssp HHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecC
Confidence 12356888888999988776665
No 301
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=93.03 E-value=0.15 Score=45.83 Aligned_cols=87 Identities=16% Similarity=0.200 Sum_probs=57.2
Q ss_pred EEEEeCCCCCcchHHHHHHHHc--CCeEEEeeC-CCCCCcee--cCcccc-------cCHHHhhccCCCcEEEEecCh--
Q 019500 44 RVICQGITGKNGTFHTEQAIEY--GTKMVGGVT-PKKGGTEH--LGLPVF-------NTVAEAKAETKANASAIYVPP-- 109 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~--G~~vv~~Vn-P~~~g~~i--~G~p~y-------~sl~dip~~~~vDlavi~vp~-- 109 (340)
+|+|.|++|..|+.+++.|.+. |++++.... +... .+. .++..+ .++.++.+ ++|.++-+...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~l~~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~~a~~~~ 78 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKA-STLADQGVEVRHGDYNQPESLQKAFA--GVSKLLFISGPHY 78 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTT-HHHHHTTCEEEECCTTCHHHHHHHTT--TCSEEEECCCCCS
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHH-hHHhhcCCeEEEeccCCHHHHHHHHh--cCCEEEEcCCCCc
Confidence 4778899999999999999987 888774433 2210 111 122222 23445544 58999987643
Q ss_pred ------hhHHHHHHHHHHcCCcEEEEecCC
Q 019500 110 ------PFAAAAILEAMEAELDLVVCITEG 133 (340)
Q Consensus 110 ------~~v~~~v~ea~~~Gvk~vvi~t~G 133 (340)
.....+++.|.+.|++.+|.+++.
T Consensus 79 ~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~ 108 (287)
T 2jl1_A 79 DNTLLIVQHANVVKAARDAGVKHIAYTGYA 108 (287)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred CchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 245667888888899887766653
No 302
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.00 E-value=0.15 Score=45.92 Aligned_cols=89 Identities=13% Similarity=0.082 Sum_probs=55.5
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCce--ecCcccc-cCHHHhhccCCCcEEEEecChh-----hHH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE--HLGLPVF-NTVAEAKAETKANASAIYVPPP-----FAA 113 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~--i~G~p~y-~sl~dip~~~~vDlavi~vp~~-----~v~ 113 (340)
+.+|+|.|+ |.+|+.+++.|.+.|++++........... -.++..+ -++.++. -.++|++|-+.... ...
T Consensus 5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~-~~~~d~vi~~a~~~~~~~~~~~ 82 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS-LDGVTHLLISTAPDSGGDPVLA 82 (286)
T ss_dssp CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC-CTTCCEEEECCCCBTTBCHHHH
T ss_pred cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc-cCCCCEEEECCCccccccHHHH
Confidence 357889998 999999999999999997744332210001 1233333 2444432 23689999877432 234
Q ss_pred HHHHHHHH--cCCcEEEEecC
Q 019500 114 AAILEAME--AELDLVVCITE 132 (340)
Q Consensus 114 ~~v~ea~~--~Gvk~vvi~t~ 132 (340)
.+++.|.+ .+++.+|.+++
T Consensus 83 ~l~~a~~~~~~~~~~~v~~Ss 103 (286)
T 3ius_A 83 ALGDQIAARAAQFRWVGYLST 103 (286)
T ss_dssp HHHHHHHHTGGGCSEEEEEEE
T ss_pred HHHHHHHhhcCCceEEEEeec
Confidence 56666666 68888776654
No 303
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=93.00 E-value=0.38 Score=44.01 Aligned_cols=90 Identities=19% Similarity=0.138 Sum_probs=54.8
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCC--------------CCce-e--cCcccccCHHHhhccCCCcEE
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK--------------GGTE-H--LGLPVFNTVAEAKAETKANAS 103 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~--------------~g~~-i--~G~p~y~sl~dip~~~~vDla 103 (340)
+..+|+|.|++|.+|+.+++.|.+.|++++....... .+-+ + ..+.-..++.++.+ ++|++
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v 87 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK--GAAGV 87 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT--TCSEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc--CCCEE
Confidence 3456888999999999999999999998774433110 0000 1 11222233444443 58999
Q ss_pred EEecCh---------------hhHHHHHHHHHH-cCCcEEEEecC
Q 019500 104 AIYVPP---------------PFAAAAILEAME-AELDLVVCITE 132 (340)
Q Consensus 104 vi~vp~---------------~~v~~~v~ea~~-~Gvk~vvi~t~ 132 (340)
|-+... .....+++.|.+ .+++.+|.+++
T Consensus 88 ih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS 132 (342)
T 1y1p_A 88 AHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSS 132 (342)
T ss_dssp EECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECC
T ss_pred EEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecc
Confidence 876532 123445666663 57888777766
No 304
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=92.99 E-value=0.18 Score=47.87 Aligned_cols=64 Identities=16% Similarity=0.255 Sum_probs=47.1
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ceecCcccccCHHHhhccCCCcEEEEecCh
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEHLGLPVFNTVAEAKAETKANASAIYVPP 109 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i~G~p~y~sl~dip~~~~vDlavi~vp~ 109 (340)
..+|.|+|. |++|+.+++.+..+|++++ ..|+.... ....+...+.+++++.. ..|++++++|.
T Consensus 140 g~tvGIIGl-G~IG~~vA~~l~~~G~~V~-~~dr~~~~~~~~~~~~~~~~l~ell~--~aDvV~l~lPl 204 (324)
T 3hg7_A 140 GRTLLILGT-GSIGQHIAHTGKHFGMKVL-GVSRSGRERAGFDQVYQLPALNKMLA--QADVIVSVLPA 204 (324)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCCCCTTCSEEECGGGHHHHHH--TCSEEEECCCC
T ss_pred cceEEEEEE-CHHHHHHHHHHHhCCCEEE-EEcCChHHhhhhhcccccCCHHHHHh--hCCEEEEeCCC
Confidence 345677799 9999999999999999966 56665310 12222334578999887 59999999994
No 305
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=92.99 E-value=0.52 Score=41.01 Aligned_cols=88 Identities=15% Similarity=0.068 Sum_probs=56.7
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHc--CCeEEEeeCCCCC-------C-cee-cCcccccCHHHhhccCCCcEEEEecCh-
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEY--GTKMVGGVTPKKG-------G-TEH-LGLPVFNTVAEAKAETKANASAIYVPP- 109 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~--G~~vv~~VnP~~~-------g-~~i-~G~p~y~sl~dip~~~~vDlavi~vp~- 109 (340)
..+|+|.|++|.+|+.+++.|.+. |++++.. ..+.. + .-+ ..+.-..++.++.+ ++|++|-+...
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~a~~~ 80 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGL-VRSAQGKEKIGGEADVFIGDITDADSINPAFQ--GIDALVILTSAV 80 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEE-ESCHHHHHHTTCCTTEEECCTTSHHHHHHHHT--TCSEEEECCCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEE-EcCCCchhhcCCCeeEEEecCCCHHHHHHHHc--CCCEEEEecccc
Confidence 346788999999999999999998 7887643 32210 0 001 11222234555555 58998876531
Q ss_pred ------------------------------hhHHHHHHHHHHcCCcEEEEecC
Q 019500 110 ------------------------------PFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 110 ------------------------------~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
.....+++.|.+.+++.+|.+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 133 (253)
T 1xq6_A 81 PKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGS 133 (253)
T ss_dssp CEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred ccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 12466778888889988776665
No 306
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=92.95 E-value=0.22 Score=47.47 Aligned_cols=86 Identities=16% Similarity=0.088 Sum_probs=59.5
Q ss_pred eEEEEeCCCCCcchHHHHHHHHc---CCeEEEeeCC-----------------CCCCc------e--ecC--ccccc--C
Q 019500 43 TRVICQGITGKNGTFHTEQAIEY---GTKMVGGVTP-----------------KKGGT------E--HLG--LPVFN--T 90 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~---G~~vv~~VnP-----------------~~~g~------~--i~G--~p~y~--s 90 (340)
++|.|+|+ |+.|+.+.|.|.+. .+++++.-+. +..++ . +.| ++++. +
T Consensus 1 ~kVgI~G~-G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~d 79 (332)
T 1hdg_O 1 ARVAINGF-GRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD 79 (332)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred CEEEEEcc-CHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecCC
Confidence 46888899 99999999988776 4777744322 11000 1 123 34442 5
Q ss_pred HHHhh-ccCCCcEEEEecChhhHHHHHHHHHHcCCcEEEE
Q 019500 91 VAEAK-AETKANASAIYVPPPFAAAAILEAMEAELDLVVC 129 (340)
Q Consensus 91 l~dip-~~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi 129 (340)
.++++ .+.++|+++.++|.....+.+...++.|+|.+||
T Consensus 80 p~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVI 119 (332)
T 1hdg_O 80 PSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVII 119 (332)
T ss_dssp GGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEE
T ss_pred hHHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEE
Confidence 55564 1115899999999999999999999999987654
No 307
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=92.88 E-value=0.34 Score=43.52 Aligned_cols=86 Identities=13% Similarity=0.027 Sum_probs=54.0
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCe---EEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChh--------
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTK---MVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPP-------- 110 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~---vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~-------- 110 (340)
+.+|+|.|++|.+|+.+++.|.+.|+. ....+.... ..+.-..++.++.+..++|++|-+....
T Consensus 6 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~~~~~~~~-----~D~~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~ 80 (319)
T 4b8w_A 6 SMRILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKD-----ADLTDTAQTRALFEKVQPTHVIHLAAMVGGLFRNIK 80 (319)
T ss_dssp CCEEEEETCSSHHHHHHHHHHHTTTCCTTCEEEECCTTT-----CCTTSHHHHHHHHHHSCCSEEEECCCCCCCHHHHTT
T ss_pred CCeEEEECCCcHHHHHHHHHHHhcCCcccccccccCcee-----cccCCHHHHHHHHhhcCCCEEEECceeccccccccc
Confidence 456888999999999999999998861 111121111 1122223455665534589999874321
Q ss_pred -----------hHHHHHHHHHHcCCcEEEEecC
Q 019500 111 -----------FAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 111 -----------~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
....+++.|.+.|++.+|.+++
T Consensus 81 ~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS 113 (319)
T 4b8w_A 81 YNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLS 113 (319)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcc
Confidence 1234688888889988776565
No 308
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=92.85 E-value=0.23 Score=49.28 Aligned_cols=101 Identities=16% Similarity=0.132 Sum_probs=59.2
Q ss_pred hhhhhhhhcccccccCCCC----CCCCCCCCcccccCcCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCcee
Q 019500 7 SRVVRSLYMSSEICCGQSR----SFTTAPPPAPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH 82 (340)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~lf~p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i 82 (340)
+|-.|.+|....-|-.... .+.+.+ . ....+|.|+|+ |.||..++..+.+.|++++ .+|++. +..
T Consensus 5 ~~~l~~~f~~~~~~~~~~~~~~~~~~~~~--~-----~~~~kV~VIGa-G~MG~~iA~~la~~G~~V~-l~D~~~--~~~ 73 (463)
T 1zcj_A 5 AKALQYAFFAEKSANKWSTPSGASWKTAS--A-----QPVSSVGVLGL-GTMGRGIAISFARVGISVV-AVESDP--KQL 73 (463)
T ss_dssp HHHHHHHHHGGGGGGSCBCTTCCBTTTCC--C-----CCCCEEEEECC-SHHHHHHHHHHHTTTCEEE-EECSSH--HHH
T ss_pred HHHHHHHHHHHHHhcCCCCccCCCccccc--c-----CCCCEEEEECc-CHHHHHHHHHHHhCCCeEE-EEECCH--HHH
Confidence 4556778877665544221 122221 0 11235777799 9999999999999999855 556543 111
Q ss_pred ----------------cC-----------cccccCHHHhhccCCCcEEEEecChhh--HHHHHHHHHH
Q 019500 83 ----------------LG-----------LPVFNTVAEAKAETKANASAIYVPPPF--AAAAILEAME 121 (340)
Q Consensus 83 ----------------~G-----------~p~y~sl~dip~~~~vDlavi~vp~~~--v~~~v~ea~~ 121 (340)
.| ..+..+++++. +.|++|+++|.+. ..+++++..+
T Consensus 74 ~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~---~aDlVIeaVpe~~~~k~~v~~~l~~ 138 (463)
T 1zcj_A 74 DAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKELS---TVDLVVEAVFEDMNLKKKVFAELSA 138 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGGGGT---TCSEEEECCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHHHHC---CCCEEEEcCCCCHHHHHHHHHHHHh
Confidence 01 12344564443 4899999999764 2445554433
No 309
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=92.81 E-value=0.25 Score=47.39 Aligned_cols=92 Identities=16% Similarity=0.150 Sum_probs=66.0
Q ss_pred cCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCC------------------Cc--------eecC--ccccc--
Q 019500 40 DKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKG------------------GT--------EHLG--LPVFN-- 89 (340)
Q Consensus 40 p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~------------------g~--------~i~G--~p~y~-- 89 (340)
.+.++|.|.|. |++|+.+.|.+.+.+.++++.-+|... |+ .+.| ++++.
T Consensus 5 ~~~~kvgInGF-GRIGrlv~R~~~~~~veivainDp~~d~~~~a~l~~yDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~ 83 (346)
T 3h9e_O 5 ARELTVGINGF-GRIGRLVLRACMEKGVKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVEFRNGQLVVDNHEISVYQCK 83 (346)
T ss_dssp -CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCS
T ss_pred CCeeEEEEECC-ChHHHHHHHHHHhCCCEEEEEeCCCCChhHhcccccccCCCCCCCCcEEEcCCEEEECCEEEEEEecC
Confidence 35678999999 999999999988888888865455210 00 0234 34442
Q ss_pred CHHHhh-ccCCCcEEEEecChhhHHHHHHHHHHcCCcEEEEecC
Q 019500 90 TVAEAK-AETKANASAIYVPPPFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 90 sl~dip-~~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
+.++++ .+..+|+++-++......+-....++.|.|.+||-.+
T Consensus 84 dp~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsap 127 (346)
T 3h9e_O 84 EPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAP 127 (346)
T ss_dssp SGGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSC
T ss_pred ChhhCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCC
Confidence 566666 1125999999999888888899999999998775444
No 310
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=92.81 E-value=0.18 Score=47.35 Aligned_cols=97 Identities=10% Similarity=0.152 Sum_probs=61.0
Q ss_pred CCcccccCcCCeEEEEeCCCCCcchHHHHHHHHc-CC-eEEEeeCCCCC------------Cce--ecCcccccCHHHhh
Q 019500 32 PPAPAVFVDKNTRVICQGITGKNGTFHTEQAIEY-GT-KMVGGVTPKKG------------GTE--HLGLPVFNTVAEAK 95 (340)
Q Consensus 32 ~~l~~lf~p~~iaViVvGasgk~G~~v~~~l~~~-G~-~vv~~VnP~~~------------g~~--i~G~p~y~sl~dip 95 (340)
.+++.+|..+ +|+|.|++|.+|+.+++.|.+. |+ +++ .++.+.. +-+ ...+.-..++.++.
T Consensus 13 ~~~~~~~~~k--~vlVTGatG~iG~~l~~~L~~~~g~~~V~-~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~ 89 (344)
T 2gn4_A 13 PNHQNMLDNQ--TILITGGTGSFGKCFVRKVLDTTNAKKII-VYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYAL 89 (344)
T ss_dssp ---CCTTTTC--EEEEETTTSHHHHHHHHHHHHHCCCSEEE-EEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHT
T ss_pred ccHHHhhCCC--EEEEECCCcHHHHHHHHHHHhhCCCCEEE-EEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHH
Confidence 3466667554 5778899999999999999998 97 665 4443210 000 11222233455555
Q ss_pred ccCCCcEEEEecChhh------------------HHHHHHHHHHcCCcEEEEecCC
Q 019500 96 AETKANASAIYVPPPF------------------AAAAILEAMEAELDLVVCITEG 133 (340)
Q Consensus 96 ~~~~vDlavi~vp~~~------------------v~~~v~ea~~~Gvk~vvi~t~G 133 (340)
+ ++|++|-+..... ...+++.|.+.|++.+|.+++.
T Consensus 90 ~--~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~ 143 (344)
T 2gn4_A 90 E--GVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTD 143 (344)
T ss_dssp T--TCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCG
T ss_pred h--cCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCC
Confidence 4 5999998763211 2457788888999988877764
No 311
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.79 E-value=0.15 Score=46.00 Aligned_cols=88 Identities=13% Similarity=0.103 Sum_probs=55.0
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCC-CCc--e-e-cCcccccCHHHhhccCCCcEEEEecCh--------
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK-GGT--E-H-LGLPVFNTVAEAKAETKANASAIYVPP-------- 109 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~-~g~--~-i-~G~p~y~sl~dip~~~~vDlavi~vp~-------- 109 (340)
.+|+|.|+ |.+|+.+++.|.+.|++++....... ... + + ..+.-..++.++.+. ++|++|-+...
T Consensus 4 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~d~vih~a~~~~~~~~~~ 81 (286)
T 3gpi_A 4 SKILIAGC-GDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHL-RPEILVYCVAASEYSDEHY 81 (286)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGG-CCSEEEECHHHHHHC----
T ss_pred CcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcC-CCCEEEEeCCCCCCCHHHH
Confidence 35788895 99999999999999998774432211 000 0 1 122222344444442 49999977633
Q ss_pred -----hhHHHHHHHHHHcCCcEEEEecC
Q 019500 110 -----PFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 110 -----~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
.....+++.|.+.|++.+|.+++
T Consensus 82 ~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 82 RLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp -CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 23566777777788888776665
No 312
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=92.63 E-value=0.35 Score=44.66 Aligned_cols=89 Identities=10% Similarity=-0.028 Sum_probs=53.9
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCC------Cc------------e---e-cCcccccCHHHhhccCCCc
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKG------GT------------E---H-LGLPVFNTVAEAKAETKAN 101 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~------g~------------~---i-~G~p~y~sl~dip~~~~vD 101 (340)
+|+|.|++|.+|+.+++.|.+.|++++........ .. . + ..+.-..++.++.+..++|
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d 83 (348)
T 1ek6_A 4 KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFM 83 (348)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence 57889999999999999999999987744321110 00 0 0 1111122344444322588
Q ss_pred EEEEecCh------------------hhHHHHHHHHHHcCCcEEEEecC
Q 019500 102 ASAIYVPP------------------PFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 102 lavi~vp~------------------~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
++|-+... .....+++.|.+.|++.+|.+++
T Consensus 84 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 132 (348)
T 1ek6_A 84 AVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSS 132 (348)
T ss_dssp EEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 88876532 12345667777788887776665
No 313
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=92.57 E-value=0.4 Score=44.87 Aligned_cols=88 Identities=14% Similarity=0.096 Sum_probs=55.3
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCCCcee---cCcccc--------cCHHHhhccCCCcEEEEecCh
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEH---LGLPVF--------NTVAEAKAETKANASAIYVPP 109 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~g~~i---~G~p~y--------~sl~dip~~~~vDlavi~vp~ 109 (340)
+.+|+|.|++|.+|+.+++.|.+. |++++........-... .++..+ .++.++.+ ++|++|-+...
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~--~~d~Vih~A~~ 101 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVK--KCDVILPLVAI 101 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHH--HCSEEEECBCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhc--cCCEEEEcCcc
Confidence 346889999999999999999988 89877544322110111 222222 23444554 58999864321
Q ss_pred ------------------hhHHHHHHHHHHcCCcEEEEecC
Q 019500 110 ------------------PFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 110 ------------------~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
.....+++.|.+.| +.+|.+++
T Consensus 102 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS 141 (372)
T 3slg_A 102 ATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPST 141 (372)
T ss_dssp CCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECC
T ss_pred ccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCc
Confidence 11245788888889 77666665
No 314
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=92.45 E-value=0.18 Score=47.45 Aligned_cols=77 Identities=9% Similarity=0.043 Sum_probs=54.2
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCC-eEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecC--------------
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGT-KMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVP-------------- 108 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~-~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp-------------- 108 (340)
+|+|.|++|.+|+.+++.|.+.|+ +++ .++... -..++.++.+ ++|+++-+..
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~-~~d~~~---------d~~~l~~~~~--~~d~Vih~a~~~~~~~~~~~~~~n 69 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTSTTDHHIF-EVHRQT---------KEEELESALL--KADFIVHLAGVNRPEHDKEFSLGN 69 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEE-ECCTTC---------CHHHHHHHHH--HCSEEEECCCSBCTTCSTTCSSSC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEE-EECCCC---------CHHHHHHHhc--cCCEEEECCcCCCCCCHHHHHHHH
Confidence 688999999999999999999998 766 555421 1234555555 4898887642
Q ss_pred hhhHHHHHHHHHHcCCc-EEEEecC
Q 019500 109 PPFAAAAILEAMEAELD-LVVCITE 132 (340)
Q Consensus 109 ~~~v~~~v~ea~~~Gvk-~vvi~t~ 132 (340)
-.....+++.|.+.|++ .+|.+++
T Consensus 70 ~~~~~~l~~a~~~~~~~~~~v~~Ss 94 (369)
T 3st7_A 70 VSYLDHVLDILTRNTKKPAILLSSS 94 (369)
T ss_dssp CBHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCeEEEeCc
Confidence 22345678888888987 6665554
No 315
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=92.41 E-value=0.14 Score=46.28 Aligned_cols=84 Identities=15% Similarity=0.049 Sum_probs=52.6
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCcee-cCcccccCHHHhhccCCCcEEEEecChh------------
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH-LGLPVFNTVAEAKAETKANASAIYVPPP------------ 110 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i-~G~p~y~sl~dip~~~~vDlavi~vp~~------------ 110 (340)
+|+|.|++|..|+.+++.|. .|++++. ++.+. ..+ ..+.-..++.++.+..++|+++-+....
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~-~~r~~--~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~ 77 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PVGNLIA-LDVHS--KEFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELA 77 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TTSEEEE-ECTTC--SSSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHH
T ss_pred eEEEECCCCHHHHHHHHHhh-cCCeEEE-ecccc--ccccccCCCHHHHHHHHHhcCCCEEEECcccCCHhhhhcCHHHH
Confidence 58889999999999999988 7998774 44332 111 1222233455555422489998875321
Q ss_pred ------hHHHHHHHHHHcCCcEEEEecC
Q 019500 111 ------FAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 111 ------~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
....+++.|.+.|++ +|.+++
T Consensus 78 ~~~n~~~~~~l~~a~~~~~~~-~v~~SS 104 (299)
T 1n2s_A 78 QLLNATSVEAIAKAANETGAW-VVHYST 104 (299)
T ss_dssp HHHHTHHHHHHHHHHTTTTCE-EEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCc-EEEEec
Confidence 135567777777885 454554
No 316
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=92.35 E-value=0.31 Score=44.38 Aligned_cols=89 Identities=17% Similarity=0.172 Sum_probs=54.0
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCc-ee-cCcccc-------cCHHHhhccCCCcEEEEecChh----
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT-EH-LGLPVF-------NTVAEAKAETKANASAIYVPPP---- 110 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~-~i-~G~p~y-------~sl~dip~~~~vDlavi~vp~~---- 110 (340)
+|+|.|++|.+|+.+++.|.+.|++++.......... .. .++..+ .++.++.+...+|.++-+....
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 81 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASVKV 81 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCCHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcccCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccCchh
Confidence 5788999999999999999999999774332111001 11 122211 2344444322488888764321
Q ss_pred --------------hHHHHHHHHHHcCCcEEEEecC
Q 019500 111 --------------FAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 111 --------------~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
....+++.|.+.|++.+|.+++
T Consensus 82 ~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 117 (311)
T 2p5y_A 82 SVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFAST 117 (311)
T ss_dssp HHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 1245677777888888776665
No 317
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=92.31 E-value=0.23 Score=45.11 Aligned_cols=87 Identities=11% Similarity=0.062 Sum_probs=53.4
Q ss_pred EEEEeCCCCCcchHHHHHHHHc--CCeEEEeeC-CCCCCce-ecCc-------ccccCHHHhhccCCCcEEEEecCh---
Q 019500 44 RVICQGITGKNGTFHTEQAIEY--GTKMVGGVT-PKKGGTE-HLGL-------PVFNTVAEAKAETKANASAIYVPP--- 109 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~--G~~vv~~Vn-P~~~g~~-i~G~-------p~y~sl~dip~~~~vDlavi~vp~--- 109 (340)
+|+|.|++|.+|+.+++.|.+. |++++.... +.. .+ ..++ .-..++.++.++.++|++|-+...
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~ 81 (312)
T 2yy7_A 4 KILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLN--TDVVNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALLSA 81 (312)
T ss_dssp CEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCS--CHHHHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHH
T ss_pred eEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcc--ccccCCCceEEecCCCHHHHHHHHhhcCCCEEEECCccCCC
Confidence 5788899999999999999887 788764332 221 11 1112 122244555442358999887532
Q ss_pred --------------hhHHHHHHHHHHcCCcEEEEecC
Q 019500 110 --------------PFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 110 --------------~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
.....+++.|.+.|++.+|.+++
T Consensus 82 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 118 (312)
T 2yy7_A 82 TAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSS 118 (312)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEE
T ss_pred chhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 11235667777778877665554
No 318
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=92.25 E-value=0.39 Score=43.70 Aligned_cols=89 Identities=13% Similarity=0.078 Sum_probs=54.5
Q ss_pred EEEEeCCCCCcchHHHHHHHHc--CCeEEEee-CCCCC-C-cee-cCcccccCHHHhhccCCCcEEEEecChh-------
Q 019500 44 RVICQGITGKNGTFHTEQAIEY--GTKMVGGV-TPKKG-G-TEH-LGLPVFNTVAEAKAETKANASAIYVPPP------- 110 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~--G~~vv~~V-nP~~~-g-~~i-~G~p~y~sl~dip~~~~vDlavi~vp~~------- 110 (340)
+|+|.|++|.+|+.+++.|.+. |++++... ++... + .-+ ..+.-..++.++.+..++|+++-+....
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~ 80 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTGGIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSAKGEKD 80 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCTTCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHHHHHHC
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccccCceEEEecCCCHHHHHHHHhhcCCcEEEECCcccCCccccC
Confidence 3678899999999999999887 78866432 22210 0 011 1122223455555423589999875321
Q ss_pred ----------hHHHHHHHHHHcCCcEEEEecC
Q 019500 111 ----------FAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 111 ----------~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
....+++.|.+.|++.+|.+++
T Consensus 81 ~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 112 (317)
T 3ajr_A 81 PALAYKVNMNGTYNILEAAKQHRVEKVVIPST 112 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred hHHHhhhhhHHHHHHHHHHHHcCCCEEEEecC
Confidence 1345677777889988776664
No 319
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=92.24 E-value=0.44 Score=43.72 Aligned_cols=91 Identities=13% Similarity=0.146 Sum_probs=54.4
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCc--e------ecCccc-------ccCHHHhhccCCCcEEEEe
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT--E------HLGLPV-------FNTVAEAKAETKANASAIY 106 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~--~------i~G~p~-------y~sl~dip~~~~vDlavi~ 106 (340)
+.+|+|.|++|.+|+.+++.|.+.|++++.......... . -.++.. ..++.++.+..++|++|-+
T Consensus 14 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 93 (335)
T 1rpn_A 14 TRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNL 93 (335)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEEC
Confidence 567899999999999999999999998774443221000 0 011221 2234444432247988876
Q ss_pred cChh------------------hHHHHHHHHHHcCC-cEEEEecC
Q 019500 107 VPPP------------------FAAAAILEAMEAEL-DLVVCITE 132 (340)
Q Consensus 107 vp~~------------------~v~~~v~ea~~~Gv-k~vvi~t~ 132 (340)
.... ....+++.|.+.|+ +.+|.+++
T Consensus 94 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 138 (335)
T 1rpn_A 94 AAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAST 138 (335)
T ss_dssp CSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred ccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 4321 13356777777786 67665654
No 320
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=92.23 E-value=0.46 Score=44.42 Aligned_cols=89 Identities=10% Similarity=-0.084 Sum_probs=55.4
Q ss_pred CeEEEEeCCCCCcchHHHHHHHH--cCCeEEEeeC-CC------------CCCcee---------cCcccccCHHHhhcc
Q 019500 42 NTRVICQGITGKNGTFHTEQAIE--YGTKMVGGVT-PK------------KGGTEH---------LGLPVFNTVAEAKAE 97 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~--~G~~vv~~Vn-P~------------~~g~~i---------~G~p~y~sl~dip~~ 97 (340)
..+|+|.|++|-+|+.+++.|.+ .|++++.... +. ..-... ..+.-..+++++. .
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~ 88 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLE-K 88 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHT-T
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhh-c
Confidence 45688999999999999999999 8999774432 21 000011 1122223455551 1
Q ss_pred CCCcEEEEecCh----------------hhHHHHHHHHHHcCCcEEEEecC
Q 019500 98 TKANASAIYVPP----------------PFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 98 ~~vDlavi~vp~----------------~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
.++|++|-+... .....+++.|.+.|++ +|.+++
T Consensus 89 ~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS 138 (362)
T 3sxp_A 89 LHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASS 138 (362)
T ss_dssp SCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred cCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCc
Confidence 269999866431 2234677888888998 665665
No 321
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=92.10 E-value=0.38 Score=45.97 Aligned_cols=88 Identities=16% Similarity=0.043 Sum_probs=61.3
Q ss_pred eEEEEeCCCCCcchHHHHHHHHc----CCeEEEeeCC---C----------CC----------Cc--eecC--ccccc--
Q 019500 43 TRVICQGITGKNGTFHTEQAIEY----GTKMVGGVTP---K----------KG----------GT--EHLG--LPVFN-- 89 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~----G~~vv~~VnP---~----------~~----------g~--~i~G--~p~y~-- 89 (340)
++|.|.|+ |++|+.+.+.+.+. .+++++.-++ + -. ++ .+.| ++++.
T Consensus 2 ikVaInGf-GrIGr~v~r~l~~~~~~~~~evvaInd~~~~~~~a~ll~ydS~hg~f~~~v~~~~~~l~v~g~~i~v~~~~ 80 (335)
T 1obf_O 2 IRVAINGY-GRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANR 80 (335)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCS
T ss_pred cEEEEECC-CHHHHHHHHHHHhcCCCCCcEEEEEeCCCCHHHHHHHhccCCcCCCCCCCEEEeCCEEEECCEEEEEEEcC
Confidence 68889999 99999999988876 5677754443 1 00 01 1233 34442
Q ss_pred CHHHhhc-cCCCcEEEEecChhhHHHHHHHHHHcCCcEEEEecC
Q 019500 90 TVAEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 90 sl~dip~-~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
+.++++- +.++|+++.+++.....+.....++.|.|.++| +.
T Consensus 81 dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVvi-Sa 123 (335)
T 1obf_O 81 NPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVII-SA 123 (335)
T ss_dssp CGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEE-SS
T ss_pred CcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEE-CC
Confidence 4566652 136999999999888888888999999998664 53
No 322
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=92.07 E-value=0.16 Score=50.92 Aligned_cols=87 Identities=15% Similarity=0.056 Sum_probs=55.8
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCcee----------------c-------------CcccccCHHHh
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH----------------L-------------GLPVFNTVAEA 94 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i----------------~-------------G~p~y~sl~di 94 (340)
+|.|+|+ |.||..++..+.+.|++++ ..|++. +.+ . .+....+++++
T Consensus 7 kVgVIGa-G~MG~~IA~~la~aG~~V~-l~D~~~--e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 82 (483)
T 3mog_A 7 TVAVIGS-GTMGAGIAEVAASHGHQVL-LYDISA--EALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHAL 82 (483)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCEE-EECSCH--HHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGGGG
T ss_pred EEEEECc-CHHHHHHHHHHHHCCCeEE-EEECCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHHHh
Confidence 4666699 9999999999999999855 556543 111 1 12344566655
Q ss_pred hccCCCcEEEEecChhh--HHHHHHHHHHc-CCcEEE-EecCCCChh
Q 019500 95 KAETKANASAIYVPPPF--AAAAILEAMEA-ELDLVV-CITEGIPQH 137 (340)
Q Consensus 95 p~~~~vDlavi~vp~~~--v~~~v~ea~~~-Gvk~vv-i~t~Gf~e~ 137 (340)
. +.|++|.++|.+. -.+++++..+. .-..++ .-|++++.+
T Consensus 83 ~---~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i~ 126 (483)
T 3mog_A 83 A---AADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISIT 126 (483)
T ss_dssp G---GCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH
T ss_pred c---CCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCHH
Confidence 4 4899999999874 24566665443 223333 346777643
No 323
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.07 E-value=0.035 Score=45.63 Aligned_cols=66 Identities=8% Similarity=-0.037 Sum_probs=47.4
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ce---ecCcc--cccCHHHhhccCCCcEEEEecChhh
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE---HLGLP--VFNTVAEAKAETKANASAIYVPPPF 111 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~---i~G~p--~y~sl~dip~~~~vDlavi~vp~~~ 111 (340)
..+|.|+|+ |.+|+.+++.|.+.|++ +..+|++... ++ -.|.+ .+.++.+..+ +.|+++.++|...
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~-v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~--~~Divi~at~~~~ 92 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYK-VTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIK--NNDVIITATSSKT 92 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCE-EEEEESCHHHHHHHHHHHTCEEEECSCHHHHHH--TCSEEEECSCCSS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCE-EEEEcCCHHHHHHHHHHhCCceEeecCHHHHhc--CCCEEEEeCCCCC
Confidence 446778898 99999999998888998 6577765410 11 12333 5678888766 5899999998763
No 324
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=92.07 E-value=0.53 Score=43.72 Aligned_cols=89 Identities=19% Similarity=0.144 Sum_probs=54.8
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeC-CCCCCcee-------cCccc-------ccCHHHhhccCCCcEEEEec
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVT-PKKGGTEH-------LGLPV-------FNTVAEAKAETKANASAIYV 107 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~Vn-P~~~g~~i-------~G~p~-------y~sl~dip~~~~vDlavi~v 107 (340)
.+|+|.|++|.+|+.+++.|.+.|++++.... +... ... .++.. ..++.++.+..++|++|-+.
T Consensus 10 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A 88 (357)
T 1rkx_A 10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTV-PSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA 88 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSS-SCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCccc-chhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEECC
Confidence 46888999999999999999999998774432 2210 111 12221 22344444322489999876
Q ss_pred Chh------------------hHHHHHHHHHHcC-CcEEEEecC
Q 019500 108 PPP------------------FAAAAILEAMEAE-LDLVVCITE 132 (340)
Q Consensus 108 p~~------------------~v~~~v~ea~~~G-vk~vvi~t~ 132 (340)
... ....+++.|.+.+ ++.+|.+++
T Consensus 89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 132 (357)
T 1rkx_A 89 AQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS 132 (357)
T ss_dssp SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred CCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 410 1234667777776 778777776
No 325
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=91.92 E-value=0.33 Score=44.53 Aligned_cols=90 Identities=9% Similarity=0.116 Sum_probs=53.7
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCc--ee------cCcccc-------cCHHHhhccCCCcEEEEec
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT--EH------LGLPVF-------NTVAEAKAETKANASAIYV 107 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~--~i------~G~p~y-------~sl~dip~~~~vDlavi~v 107 (340)
.+|+|.|++|.+|+.+++.|.+.|++++.......... .+ .++..+ .++.++.+..++|++|-+.
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A 83 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNLA 83 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEECC
Confidence 36788999999999999999999998774332211000 00 012222 2344444322479888775
Q ss_pred Chh------------------hHHHHHHHHHHcCC-cEEEEecC
Q 019500 108 PPP------------------FAAAAILEAMEAEL-DLVVCITE 132 (340)
Q Consensus 108 p~~------------------~v~~~v~ea~~~Gv-k~vvi~t~ 132 (340)
... ....+++.|.+.|+ +.+|.+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (345)
T 2z1m_A 84 AQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAST 127 (345)
T ss_dssp CCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred CCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence 321 13456777777787 66665655
No 326
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=91.86 E-value=0.51 Score=44.03 Aligned_cols=79 Identities=10% Similarity=-0.032 Sum_probs=50.0
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCC-eEEEeeCCCCCCceecC-----------------cccccCHHHhhccCCCcEEE
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGT-KMVGGVTPKKGGTEHLG-----------------LPVFNTVAEAKAETKANASA 104 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~-~vv~~VnP~~~g~~i~G-----------------~p~y~sl~dip~~~~vDlav 104 (340)
.+|.|+|+ |.+|..++..+.+.|+ + +..++++. +...+ +....+++++. +.|+++
T Consensus 5 ~kI~VIGa-G~~G~~ia~~la~~g~~~-V~l~D~~~--~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~a~~---~aDiVi 77 (317)
T 2ewd_A 5 RKIAVIGS-GQIGGNIAYIVGKDNLAD-VVLFDIAE--GIPQGKALDITHSMVMFGSTSKVIGTDDYADIS---GSDVVI 77 (317)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCE-EEEECSSS--SHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGT---TCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCce-EEEEeCCc--hHHHHHHHHHHhhhhhcCCCcEEEECCCHHHhC---CCCEEE
Confidence 46778899 9999999999988888 7 33666543 21111 22224554433 589999
Q ss_pred EecC----------------hhhHHHHHHHHHHcCCcEEE
Q 019500 105 IYVP----------------PPFAAAAILEAMEAELDLVV 128 (340)
Q Consensus 105 i~vp----------------~~~v~~~v~ea~~~Gvk~vv 128 (340)
++++ .+...+++++..+..-+.++
T Consensus 78 ~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~ii 117 (317)
T 2ewd_A 78 ITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFV 117 (317)
T ss_dssp ECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred EeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEE
Confidence 9993 23355667776666545433
No 327
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=91.68 E-value=0.66 Score=42.05 Aligned_cols=86 Identities=14% Similarity=0.146 Sum_probs=52.7
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCce--ecCcccc-cCHH-----HhhccCCCcEEEEecCh------
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE--HLGLPVF-NTVA-----EAKAETKANASAIYVPP------ 109 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~--i~G~p~y-~sl~-----dip~~~~vDlavi~vp~------ 109 (340)
+|+|.|++|.+|+.+++.|.+.|++++..........+ -.++..+ .++. +..+ . |++|-+...
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~-d~vih~A~~~~~~~~ 78 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYSWGAGIK--G-DVVFHFAANPEVRLS 78 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTTTTTTCC--C-SEEEECCSSCSSSGG
T ss_pred EEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHHHHhhcC--C-CEEEECCCCCCchhh
Confidence 58889999999999999999999997743321110011 1122222 1222 2222 2 888865531
Q ss_pred ------------hhHHHHHHHHHHcCCcEEEEecC
Q 019500 110 ------------PFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 110 ------------~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
.....+++.|.+.|++.+|.+++
T Consensus 79 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 113 (312)
T 3ko8_A 79 TTEPIVHFNENVVATFNVLEWARQTGVRTVVFASS 113 (312)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCc
Confidence 12346778888889988776665
No 328
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=91.63 E-value=0.35 Score=44.04 Aligned_cols=88 Identities=16% Similarity=0.109 Sum_probs=49.3
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCC-Ccee-cCcccccCHHHhhccCCCcEEEEecChh----------
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKG-GTEH-LGLPVFNTVAEAKAETKANASAIYVPPP---------- 110 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~-g~~i-~G~p~y~sl~dip~~~~vDlavi~vp~~---------- 110 (340)
.+|+|.|++|.+|+.+++.|.+.|++++. ++.+.. +..+ ..+.-..++.++.+..++|++|-+....
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~ 81 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQNNWHAVG-CGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPD 81 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEE-EC------------------CHHHHHHHCCSEEEECC-------------
T ss_pred CeEEEECCCcHHHHHHHHHHHhCCCeEEE-EccCCCCCCeEEecCCCHHHHHHHHHhhCCCEEEECCcccChhhhhcCHH
Confidence 36888999999999999999999998774 442210 0001 1122223444444322489888765321
Q ss_pred --------hHHHHHHHHHHcCCcEEEEecC
Q 019500 111 --------FAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 111 --------~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
....+++.|.+.|++ +|.+++
T Consensus 82 ~~~~~n~~~~~~l~~a~~~~~~~-~v~~SS 110 (315)
T 2ydy_A 82 AASQLNVDASGNLAKEAAAVGAF-LIYISS 110 (315)
T ss_dssp ------CHHHHHHHHHHHHHTCE-EEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCe-EEEEch
Confidence 235577788888885 444554
No 329
>2g6t_A Uncharacterized protein, homolog HI1244 from haemophilus influenzae; hypothetical protein, structural genomics, PSI; 3.00A {Clostridium acetobutylicum} SCOP: c.147.1.1
Probab=91.54 E-value=0.38 Score=44.95 Aligned_cols=115 Identities=13% Similarity=0.109 Sum_probs=77.3
Q ss_pred EEEEeCCCCCcchHHHHHHHHc----CCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChhhHHHHHHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEY----GTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEA 119 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~----G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ea 119 (340)
+|+|.|+ |..+......++.. .+.+++..++..-++.++|.|++. .+|+..- +.|-++|+..- .-.++=.++
T Consensus 3 ~~~I~g~-~~~~~~a~n~~~~~~~~~~~~i~~~~~~dk~a~~idg~~v~s-~~~i~~~-e~DyiiIa~~~-~~~qi~~~l 78 (306)
T 2g6t_A 3 KCLIWGV-NDEYTLAYDKLLFEISKGNLSIEALISKDKYAKYIDGKEVID-KTEISNY-EFDYIIIFNKE-RYSDIKNEA 78 (306)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHHHTTSEEEEEEECSSCSCSBSSSCBEEC-GGGGGGS-CCSEEEECCTT-THHHHHHHH
T ss_pred eEEEEec-cHHHHHHHHHHHHHhhcccceEEEEecchhhhhhhCCeeccC-HHHHhcC-CCCEEEEeccc-cHHHHHHHH
Confidence 5788899 66666666665542 367887778765558899999996 4555432 69999999866 566777778
Q ss_pred HHcCCcEEEEecCCC---ChhhHHHHHHHHhccCCcEEEccCCCCccc
Q 019500 120 MEAELDLVVCITEGI---PQHDMVRVKAALNNQSKTRLVGPNCPGVIK 164 (340)
Q Consensus 120 ~~~Gvk~vvi~t~Gf---~e~~~~~l~~~aar~~girviGPNc~Gi~~ 164 (340)
++.||+.==|++.-+ +.-+.++-.+ + +.+++.|+-.||.|-.-
T Consensus 79 ~~~gi~~~ki~~~~~~~i~~~~~~r~~r-L-~N~~~TIISnNC~Gg~i 124 (306)
T 2g6t_A 79 LELGIPERKILNGKFFFISNFDFKRYCK-L-IENPITIISDDCWGGLV 124 (306)
T ss_dssp HHTTCCGGGEECSGGGGSTTCCHHHHHH-H-HHTTCEEEESSSHHHHH
T ss_pred HHcCCchhheeeeEEEecccccHHHHHH-h-cCCCcEEEecCchhHHH
Confidence 799986533344322 1223333222 2 57889999999988543
No 330
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=91.51 E-value=0.58 Score=43.84 Aligned_cols=31 Identities=32% Similarity=0.546 Sum_probs=26.6
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEee
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGV 73 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~V 73 (340)
.+|+|.|++|.+|+.+++.|.+.|++++...
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~ 55 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIV 55 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEE
Confidence 4688999999999999999999999877443
No 331
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=91.48 E-value=0.44 Score=47.44 Aligned_cols=90 Identities=10% Similarity=-0.001 Sum_probs=54.3
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCC-Cce-----------------------ecCcccccCHHHhhccC
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKG-GTE-----------------------HLGLPVFNTVAEAKAET 98 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~-g~~-----------------------i~G~p~y~sl~dip~~~ 98 (340)
.+|.|+|+ |.||..++..+.+.|++++ .+|++.. +.. ...+....+++++.
T Consensus 55 ~kVaVIGa-G~MG~~IA~~la~aG~~V~-l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~al~--- 129 (460)
T 3k6j_A 55 NSVAIIGG-GTMGKAMAICFGLAGIETF-LVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFHKLS--- 129 (460)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGGGCT---
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEE-EEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHHHHc---
Confidence 45778899 9999999999999999855 5555431 000 01123345665443
Q ss_pred CCcEEEEecChhh--HHHHHHHHHHc-CCcEEE-EecCCCChh
Q 019500 99 KANASAIYVPPPF--AAAAILEAMEA-ELDLVV-CITEGIPQH 137 (340)
Q Consensus 99 ~vDlavi~vp~~~--v~~~v~ea~~~-Gvk~vv-i~t~Gf~e~ 137 (340)
+.|++|.++|.+. -.+++++..+. .-..++ ..|++++..
T Consensus 130 ~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~ 172 (460)
T 3k6j_A 130 NCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLN 172 (460)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHH
T ss_pred cCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHH
Confidence 4899999999743 33455554332 122333 346677643
No 332
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.34 E-value=0.5 Score=38.03 Aligned_cols=85 Identities=12% Similarity=0.006 Sum_probs=50.4
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ce--ecCcccc-cC------HHHhhccCCCcEEEEecChhhH-
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPVF-NT------VAEAKAETKANASAIYVPPPFA- 112 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~--i~G~p~y-~s------l~dip~~~~vDlavi~vp~~~v- 112 (340)
+|+|+|+ |++|+.+++.|.+.|++++ .++.+... ++ -.|..++ .+ +.++.- .+.|++++++|.+..
T Consensus 8 ~v~I~G~-G~iG~~la~~L~~~g~~V~-~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~-~~~d~vi~~~~~~~~n 84 (141)
T 3llv_A 8 EYIVIGS-EAAGVGLVRELTAAGKKVL-AVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDL-EGVSAVLITGSDDEFN 84 (141)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEE-EEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCC-TTCSEEEECCSCHHHH
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCeEE-EEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCc-ccCCEEEEecCCHHHH
Confidence 4677899 9999999999999999866 55543310 01 1233322 22 232211 258999999986443
Q ss_pred HHHHHHHHHcCCcEEEEec
Q 019500 113 AAAILEAMEAELDLVVCIT 131 (340)
Q Consensus 113 ~~~v~ea~~~Gvk~vvi~t 131 (340)
..+...+-+.+...++..+
T Consensus 85 ~~~~~~a~~~~~~~iia~~ 103 (141)
T 3llv_A 85 LKILKALRSVSDVYAIVRV 103 (141)
T ss_dssp HHHHHHHHHHCCCCEEEEE
T ss_pred HHHHHHHHHhCCceEEEEE
Confidence 3345555566755444333
No 333
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=91.33 E-value=0.54 Score=43.66 Aligned_cols=83 Identities=16% Similarity=0.115 Sum_probs=51.0
Q ss_pred EEEEeCCCCCcchHHHHHHHHcC--CeEEEeeCCCCCC-c----eec--------Cccc-ccCHHHhhccCCCcEEEEec
Q 019500 44 RVICQGITGKNGTFHTEQAIEYG--TKMVGGVTPKKGG-T----EHL--------GLPV-FNTVAEAKAETKANASAIYV 107 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G--~~vv~~VnP~~~g-~----~i~--------G~p~-y~sl~dip~~~~vDlavi~v 107 (340)
+|.|+|+ |.+|..++..|.+.| .+++ .+|.+... + ++. ...+ ..+.+++. +.|++++++
T Consensus 3 kI~VIGa-G~~G~~la~~L~~~g~~~~V~-l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~---~aDvViiav 77 (309)
T 1hyh_A 3 KIGIIGL-GNVGAAVAHGLIAQGVADDYV-FIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALA---DADVVISTL 77 (309)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCCSEEE-EECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGT---TCSEEEECC
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEE-EEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCHHHhC---CCCEEEEec
Confidence 6778897 999999999988888 4544 66654310 0 111 1223 24553332 589999999
Q ss_pred Chhh--------------------HHHHHHHHHHcCCcEE-EEec
Q 019500 108 PPPF--------------------AAAAILEAMEAELDLV-VCIT 131 (340)
Q Consensus 108 p~~~--------------------v~~~v~ea~~~Gvk~v-vi~t 131 (340)
|+.. ..+++++..+..-+.+ +++|
T Consensus 78 ~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~t 122 (309)
T 1hyh_A 78 GNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS 122 (309)
T ss_dssp SCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred CCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence 8755 3567777766554443 3344
No 334
>1gr0_A Inositol-3-phosphate synthase; isomerase, oxidoreductase, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: NAD; 1.95A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3
Probab=91.22 E-value=3.6 Score=39.60 Aligned_cols=27 Identities=11% Similarity=0.036 Sum_probs=20.8
Q ss_pred ecChHHH--HHHHHHHHhCCCCceEEeec
Q 019500 187 SRSGTLT--YEAVFQTTAVGLGQSTCVGI 213 (340)
Q Consensus 187 SQSG~l~--~~~~~~~~~~giG~S~~vs~ 213 (340)
||+|+-- ..+.+.+..||+.+..+.++
T Consensus 200 sq~G~T~~k~~La~~l~~rg~kv~~~~q~ 228 (367)
T 1gr0_A 200 SQVGATITHRVLAKLFEDRGVQLDRTMQL 228 (367)
T ss_dssp CSSCHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred cccCCChHHHHHHHHHHHcCCceeEEEEE
Confidence 7888543 44678889999999988864
No 335
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=91.15 E-value=0.98 Score=40.78 Aligned_cols=35 Identities=17% Similarity=0.217 Sum_probs=27.8
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCC
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK 77 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~ 77 (340)
..+|+|+|+ |..|..++++|...|...+..||+..
T Consensus 31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 346778899 88999999999999985444788764
No 336
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=91.02 E-value=0.57 Score=44.70 Aligned_cols=88 Identities=16% Similarity=0.138 Sum_probs=63.5
Q ss_pred eEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCC-----------C-------CCc--------eecC--cccc--cCH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPK-----------K-------GGT--------EHLG--LPVF--NTV 91 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~-----------~-------~g~--------~i~G--~p~y--~sl 91 (340)
++|.|.|. |++|+.+.|.+.+. ..++++.-+|. + .|+ .+.| ++++ ++.
T Consensus 2 ~kv~INGf-GrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~dp 80 (332)
T 3pym_A 2 VRVAINGF-GRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVSHDDKHIIVDGKKIATYQERDP 80 (332)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHSTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred eEEEEECC-CcHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEEEEeeccc
Confidence 68889999 99999999987775 57888655562 1 010 0234 3455 357
Q ss_pred HHhhc-cCCCcEEEEecChhhHHHHHHHHHHcCCcEEEEec
Q 019500 92 AEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVCIT 131 (340)
Q Consensus 92 ~dip~-~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t 131 (340)
+++|- +..+|+++-++......+-....++.|.|.++|-.
T Consensus 81 ~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsa 121 (332)
T 3pym_A 81 ANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITA 121 (332)
T ss_dssp GGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESS
T ss_pred ccCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEECC
Confidence 77763 24699999999888888888999999999866533
No 337
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=91.00 E-value=0.65 Score=42.24 Aligned_cols=85 Identities=13% Similarity=0.078 Sum_probs=54.4
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCce--------e-cCcccccCHHHhhccCCCcEEEEecCh-----
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE--------H-LGLPVFNTVAEAKAETKANASAIYVPP----- 109 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~--------i-~G~p~y~sl~dip~~~~vDlavi~vp~----- 109 (340)
+|+|.|++|-+|+.+++.|.+.| .++...+......+ + ..+.- .++.++.+ ++|.++-+...
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~--~~d~vih~a~~~~~~~ 78 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYLK--GAEEVWHIAANPDVRI 78 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHHT--TCSEEEECCCCCCCC-
T ss_pred EEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHhc--CCCEEEECCCCCChhh
Confidence 57888999999999999999988 44434433221011 1 12222 45556555 58998876431
Q ss_pred -------------hhHHHHHHHHHHcCCcEEEEecC
Q 019500 110 -------------PFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 110 -------------~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
.....+++.|.+.|++.+|.+++
T Consensus 79 ~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 114 (313)
T 3ehe_A 79 GAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114 (313)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 12344677788889988777776
No 338
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=90.89 E-value=1.1 Score=42.05 Aligned_cols=31 Identities=19% Similarity=0.188 Sum_probs=26.5
Q ss_pred eEEEEeCCCCCcchHHHHHHH-HcCCeEEEee
Q 019500 43 TRVICQGITGKNGTFHTEQAI-EYGTKMVGGV 73 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~-~~G~~vv~~V 73 (340)
++|+|.|++|.+|+.+++.|. +.|++++...
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~ 34 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD 34 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEe
Confidence 368899999999999999999 8999877443
No 339
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=90.82 E-value=0.12 Score=49.63 Aligned_cols=88 Identities=16% Similarity=0.117 Sum_probs=60.4
Q ss_pred eEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCC---C-----------CC---C------c--eecC--ccccc--CHH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTP---K-----------KG---G------T--EHLG--LPVFN--TVA 92 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP---~-----------~~---g------~--~i~G--~p~y~--sl~ 92 (340)
++|.|.|+ |++|+.+.+.+.+. .+++++.-+. + ++ + + .+.| ++++. +.+
T Consensus 3 ikV~InGf-GrIGr~v~r~l~~~~~~evvaInd~~~~~~~a~ll~yDs~hG~~~~~v~~~~~~l~v~Gk~i~v~~~~dp~ 81 (342)
T 2ep7_A 3 IKVGINGF-GRIGRSFFRASWGREEIEIVAINDLTDAKHLAHLLKYDSVHGIFKGSVEAKDDSIVVDGKEIKVFAQKDPS 81 (342)
T ss_dssp CEEEEECC-SHHHHHHHHHHTTCTTCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEEEECCSSGG
T ss_pred eEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHhhhhhcccccccCCCcEEEcCCEEEECCEEEEEEEcCChh
Confidence 68889999 99999999988776 6888754332 1 10 0 1 1223 34453 444
Q ss_pred Hhhc-cCCCcEEEEecChhhHHHHHHHHHHcCCcEEEEecC
Q 019500 93 EAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 93 dip~-~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
+++- +.++|+++.+++.....+.....++.|.|.++ ++.
T Consensus 82 ~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVv-isa 121 (342)
T 2ep7_A 82 QIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVI-ITA 121 (342)
T ss_dssp GCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEE-ESS
T ss_pred hCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEE-ecC
Confidence 5541 12589999999998888888999999998855 453
No 340
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=90.81 E-value=0.36 Score=43.34 Aligned_cols=27 Identities=19% Similarity=0.338 Sum_probs=24.2
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEE
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMV 70 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv 70 (340)
+|+|.|++|.+|+.+++.|.+.|++++
T Consensus 5 ~vlVTGasg~IG~~la~~L~~~G~~V~ 31 (267)
T 3rft_A 5 RLLVTGAAGQLGRVMRERLAPMAEILR 31 (267)
T ss_dssp EEEEESTTSHHHHHHHHHTGGGEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCEEE
Confidence 578899999999999999999998865
No 341
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=90.56 E-value=1.3 Score=40.63 Aligned_cols=87 Identities=15% Similarity=0.143 Sum_probs=54.3
Q ss_pred EEEEeCCCCCcchHHHHHHHHc---C---CeEEEeeCCCCCC--cee------cCcccc-------cCHHHhhccCCCcE
Q 019500 44 RVICQGITGKNGTFHTEQAIEY---G---TKMVGGVTPKKGG--TEH------LGLPVF-------NTVAEAKAETKANA 102 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~---G---~~vv~~VnP~~~g--~~i------~G~p~y-------~sl~dip~~~~vDl 102 (340)
+|+|.|++|.+|+.+++.|.+. | ++++........+ +.+ .++..+ .++.++.. ++|+
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~ 79 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELR--GVDA 79 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTT--TCCE
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhc--CCCE
Confidence 5788999999999999999986 7 8876443221100 111 122211 23444443 6899
Q ss_pred EEEecCh------------------hhHHHHHHHHHHcCCcEEEEecC
Q 019500 103 SAIYVPP------------------PFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 103 avi~vp~------------------~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
+|-+... .....+++.|.+.+++.+|.+++
T Consensus 80 Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS 127 (337)
T 1r6d_A 80 IVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVST 127 (337)
T ss_dssp EEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 9877532 12346777888889987776665
No 342
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=90.47 E-value=1 Score=41.27 Aligned_cols=89 Identities=11% Similarity=0.033 Sum_probs=52.8
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCC-Cce--------------e-cCcccccCHHHhhccCCCcEEEEec
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKG-GTE--------------H-LGLPVFNTVAEAKAETKANASAIYV 107 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~-g~~--------------i-~G~p~y~sl~dip~~~~vDlavi~v 107 (340)
+|+|.|++|.+|+.+++.|.+.|++++...+.... .+. + ..+.-..++.++.+..++|++|-+.
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~A 81 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFA 81 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEECC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEECC
Confidence 57889999999999999999999987643221110 000 0 0111112344444323589988754
Q ss_pred Ch------------------hhHHHHHHHHHHcCCcEEEEecC
Q 019500 108 PP------------------PFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 108 p~------------------~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
.. .....+++.|.+.|++.+|.+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 124 (338)
T 1udb_A 82 GLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSS 124 (338)
T ss_dssp SCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred ccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc
Confidence 21 11234566677778887776665
No 343
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=90.40 E-value=1 Score=42.36 Aligned_cols=89 Identities=8% Similarity=-0.072 Sum_probs=54.0
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcC--CeEEEeeCCCCCCce---ec--C----cccc---cCHHHhhccCCCcEEEEe
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYG--TKMVGGVTPKKGGTE---HL--G----LPVF---NTVAEAKAETKANASAIY 106 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G--~~vv~~VnP~~~g~~---i~--G----~p~y---~sl~dip~~~~vDlavi~ 106 (340)
++.+|+|+|++|..|..++..|.+.| .+++ .++.+..... +. . +..+ .++.+... +.|+++++
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~-l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~--gaDvVi~~ 83 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLH-LYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALT--GMDLIIVP 83 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEE-EEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHT--TCSEEEEC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEE-EEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcC--CCCEEEEc
Confidence 34688899988999999888888777 4544 4443220011 11 0 1111 13444443 58999998
Q ss_pred cC--h--------------hhHHHHHHHHHHcCCcEEEEecC
Q 019500 107 VP--P--------------PFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 107 vp--~--------------~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
.+ . ..+.++++++.+.+.+..+++.+
T Consensus 84 ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S 125 (326)
T 1smk_A 84 AGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS 125 (326)
T ss_dssp CCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred CCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence 74 1 34667778888888776555554
No 344
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=90.25 E-value=0.76 Score=40.05 Aligned_cols=86 Identities=15% Similarity=0.190 Sum_probs=54.7
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-ce---ecCcccc-cC------HHHhhccCCCcEEEEecChhhH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE---HLGLPVF-NT------VAEAKAETKANASAIYVPPPFA 112 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~---i~G~p~y-~s------l~dip~~~~vDlavi~vp~~~v 112 (340)
+|+|+|+ |++|+.+++.|.+.|++++ .++.+... ++ -.|.+++ .+ +.+..- .+.|++++++|.+..
T Consensus 2 ~iiIiG~-G~~G~~la~~L~~~g~~v~-vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i-~~ad~vi~~~~~d~~ 78 (218)
T 3l4b_C 2 KVIIIGG-ETTAYYLARSMLSRKYGVV-IINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEV-SKNDVVVILTPRDEV 78 (218)
T ss_dssp CEEEECC-HHHHHHHHHHHHHTTCCEE-EEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTC-CTTCEEEECCSCHHH
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCeEE-EEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCc-ccCCEEEEecCCcHH
Confidence 5788898 9999999999999999865 55543310 11 1244332 22 333311 258999999999877
Q ss_pred HHHHHHHHHc--CCcEEEEecC
Q 019500 113 AAAILEAMEA--ELDLVVCITE 132 (340)
Q Consensus 113 ~~~v~ea~~~--Gvk~vvi~t~ 132 (340)
-..+...++. +...++..+.
T Consensus 79 n~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 79 NLFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp HHHHHHHHHHTSCCCEEEECCC
T ss_pred HHHHHHHHHHHcCCCeEEEEEe
Confidence 6666665553 6666554443
No 345
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=90.14 E-value=2.2 Score=39.03 Aligned_cols=89 Identities=13% Similarity=0.092 Sum_probs=54.1
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEee-CCCCCC--c---ee---cCccc-------ccCHHHhhccCCCcEEEE
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGV-TPKKGG--T---EH---LGLPV-------FNTVAEAKAETKANASAI 105 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~V-nP~~~g--~---~i---~G~p~-------y~sl~dip~~~~vDlavi 105 (340)
..+|+|.|++|-+|+.+++.|.+.|++++..+ ++.... . .+ .++.. ..++.++.+ ++|.++-
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~Vih 86 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIA--GCDFVFH 86 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHT--TCSEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHc--CCCEEEE
Confidence 34688999999999999999999999976443 332100 0 00 11222 234555554 5888886
Q ss_pred ecCh---------h--------hHHHHHHHHHHcC-CcEEEEecC
Q 019500 106 YVPP---------P--------FAAAAILEAMEAE-LDLVVCITE 132 (340)
Q Consensus 106 ~vp~---------~--------~v~~~v~ea~~~G-vk~vvi~t~ 132 (340)
+..+ + ....+++.|.+.+ ++.+|.+++
T Consensus 87 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS 131 (338)
T 2rh8_A 87 VATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSS 131 (338)
T ss_dssp ESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECC
T ss_pred eCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEec
Confidence 4311 1 1234566777775 888776665
No 346
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=90.12 E-value=0.17 Score=48.69 Aligned_cols=75 Identities=15% Similarity=0.087 Sum_probs=51.2
Q ss_pred eEEEEeCCCCCcchHHHHHHHH-cCCeEEEeeC---CCC---------CCceec-----C--------cc-cccCHHHhh
Q 019500 43 TRVICQGITGKNGTFHTEQAIE-YGTKMVGGVT---PKK---------GGTEHL-----G--------LP-VFNTVAEAK 95 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~-~G~~vv~~Vn---P~~---------~g~~i~-----G--------~p-~y~sl~dip 95 (340)
++|.|+|+ |.+|...+..|.+ .|+++. .++ ++. .|-.+. | +. +..++++..
T Consensus 3 mkI~ViGa-G~~G~~~a~~La~~~G~~V~-~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 80 (404)
T 3c7a_A 3 VKVCVCGG-GNGAHTLSGLAASRDGVEVR-VLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAI 80 (404)
T ss_dssp EEEEEECC-SHHHHHHHHHHTTSTTEEEE-EECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHH
T ss_pred ceEEEECC-CHHHHHHHHHHHhCCCCEEE-EEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHh
Confidence 46778899 9999999999977 488755 555 311 000000 2 11 345677765
Q ss_pred ccCCCcEEEEecChhhHHHHHHHHHH
Q 019500 96 AETKANASAIYVPPPFAAAAILEAME 121 (340)
Q Consensus 96 ~~~~vDlavi~vp~~~v~~~v~ea~~ 121 (340)
+ +.|++++++|+....+++++...
T Consensus 81 ~--~aD~Vilav~~~~~~~v~~~l~~ 104 (404)
T 3c7a_A 81 S--GADVVILTVPAFAHEGYFQAMAP 104 (404)
T ss_dssp T--TCSEEEECSCGGGHHHHHHHHTT
T ss_pred C--CCCEEEEeCchHHHHHHHHHHHh
Confidence 4 58999999999999888877654
No 347
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=90.05 E-value=1 Score=41.29 Aligned_cols=89 Identities=12% Similarity=0.067 Sum_probs=54.5
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeC-CCCCCc------------e-e-cCcccccCHHHhhccCCCcEEEEecC
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVT-PKKGGT------------E-H-LGLPVFNTVAEAKAETKANASAIYVP 108 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~Vn-P~~~g~------------~-i-~G~p~y~sl~dip~~~~vDlavi~vp 108 (340)
+|+|.|++|.+|+.+++.|.+.|++++.... .+.... + + ..+.-..++.++.+..++|++|-+..
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 82 (347)
T 1orr_A 3 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG 82 (347)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred EEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEECCc
Confidence 5888999999999999999999999774432 111000 0 1 11111223455544223899988764
Q ss_pred hh------------------hHHHHHHHHHHcCCc-EEEEecC
Q 019500 109 PP------------------FAAAAILEAMEAELD-LVVCITE 132 (340)
Q Consensus 109 ~~------------------~v~~~v~ea~~~Gvk-~vvi~t~ 132 (340)
.. ....+++.|.+.+++ .+|.+++
T Consensus 83 ~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS 125 (347)
T 1orr_A 83 QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSST 125 (347)
T ss_dssp CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred ccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecc
Confidence 21 124567788888886 6665554
No 348
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=89.70 E-value=0.22 Score=44.79 Aligned_cols=37 Identities=22% Similarity=0.205 Sum_probs=30.5
Q ss_pred CcCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCC
Q 019500 39 VDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK 77 (340)
Q Consensus 39 ~p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~ 77 (340)
.-+.-+|+|+|+ |++|..-++.|.+.|.++. .|+|+.
T Consensus 28 ~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~Vt-Vvap~~ 64 (223)
T 3dfz_A 28 DLKGRSVLVVGG-GTIATRRIKGFLQEGAAIT-VVAPTV 64 (223)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHGGGCCCEE-EECSSC
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHHCCCEEE-EECCCC
Confidence 456667889999 8999999999999998866 788865
No 349
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=89.59 E-value=0.87 Score=42.94 Aligned_cols=82 Identities=11% Similarity=-0.021 Sum_probs=51.4
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCC-eEEEeeCCCCCCceecC-----------------cccccCHHHhhccCCCcEEE
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGT-KMVGGVTPKKGGTEHLG-----------------LPVFNTVAEAKAETKANASA 104 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~-~vv~~VnP~~~g~~i~G-----------------~p~y~sl~dip~~~~vDlav 104 (340)
.+|.|+|+ |.+|..++..+...|+ + +..++.+. +.+.| +....+++++. +.|++|
T Consensus 15 ~kI~ViGa-G~vG~~iA~~la~~g~~~-V~L~Di~~--~~l~~~~~~l~~~~~~~~~~~~i~~t~d~~al~---~aD~VI 87 (328)
T 2hjr_A 15 KKISIIGA-GQIGSTIALLLGQKDLGD-VYMFDIIE--GVPQGKALDLNHCMALIGSPAKIFGENNYEYLQ---NSDVVI 87 (328)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCE-EEEECSST--THHHHHHHHHHHHHHHHTCCCCEEEESCGGGGT---TCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCe-EEEEECCH--HHHHHHHHHHHhHhhccCCCCEEEECCCHHHHC---CCCEEE
Confidence 47888899 9999998888888888 7 33555443 11111 22224554443 489999
Q ss_pred Eec--Ch--------------hhHHHHHHHHHHcCCcEEEEec
Q 019500 105 IYV--PP--------------PFAAAAILEAMEAELDLVVCIT 131 (340)
Q Consensus 105 i~v--p~--------------~~v~~~v~ea~~~Gvk~vvi~t 131 (340)
+++ |. +...+++++..+..-+.++++.
T Consensus 88 ~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~ 130 (328)
T 2hjr_A 88 ITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICI 130 (328)
T ss_dssp ECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred EcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEe
Confidence 998 43 2355667777776655544333
No 350
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=89.39 E-value=1 Score=42.48 Aligned_cols=88 Identities=10% Similarity=-0.023 Sum_probs=54.5
Q ss_pred cCCeEEEEeCCCCCcchHHHHHHHHcCC-eEEEeeCCCCC--Cc---ee------cC----cccccCHHHhhccCCCcEE
Q 019500 40 DKNTRVICQGITGKNGTFHTEQAIEYGT-KMVGGVTPKKG--GT---EH------LG----LPVFNTVAEAKAETKANAS 103 (340)
Q Consensus 40 p~~iaViVvGasgk~G~~v~~~l~~~G~-~vv~~VnP~~~--g~---~i------~G----~p~y~sl~dip~~~~vDla 103 (340)
++..+|+|+|+ |.+|+.++..|...|+ + +..++.+.. .. ++ .+ +....++++... +.|++
T Consensus 7 ~~~~kI~VIGa-G~vG~~lA~~la~~g~~~-V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~--~aDiV 82 (331)
T 1pzg_A 7 QRRKKVAMIGS-GMIGGTMGYLCALRELAD-VVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALT--GADCV 82 (331)
T ss_dssp SCCCEEEEECC-SHHHHHHHHHHHHHTCCE-EEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHT--TCSEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCe-EEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhC--CCCEE
Confidence 34568888899 9999999988888887 7 335544331 00 00 11 222356774333 58999
Q ss_pred EEec--Chh-------------------hHHHHHHHHHHcCCcEEEEec
Q 019500 104 AIYV--PPP-------------------FAAAAILEAMEAELDLVVCIT 131 (340)
Q Consensus 104 vi~v--p~~-------------------~v~~~v~ea~~~Gvk~vvi~t 131 (340)
|+++ |.. ...++++++.+..-+++++..
T Consensus 83 i~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~ 131 (331)
T 1pzg_A 83 IVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVV 131 (331)
T ss_dssp EECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred EEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEE
Confidence 9998 532 256677777777655544333
No 351
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.17 E-value=0.3 Score=47.79 Aligned_cols=78 Identities=24% Similarity=0.285 Sum_probs=51.0
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCce-----ecCcccc-cC------HHHhhccCCCcEEEEecChh
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE-----HLGLPVF-NT------VAEAKAETKANASAIYVPPP 110 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~-----i~G~p~y-~s------l~dip~~~~vDlavi~vp~~ 110 (340)
..|+|+|+ |++|+.+++.|.+.|++++ .|+.+. +. -.|+++| .+ |.++.- .+.|++|++++.+
T Consensus 5 ~~viIiG~-Gr~G~~va~~L~~~g~~vv-vId~d~--~~v~~~~~~g~~vi~GDat~~~~L~~agi-~~A~~viv~~~~~ 79 (413)
T 3l9w_A 5 MRVIIAGF-GRFGQITGRLLLSSGVKMV-VLDHDP--DHIETLRKFGMKVFYGDATRMDLLESAGA-AKAEVLINAIDDP 79 (413)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCCEE-EEECCH--HHHHHHHHTTCCCEESCTTCHHHHHHTTT-TTCSEEEECCSSH
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCCCEE-EEECCH--HHHHHHHhCCCeEEEcCCCCHHHHHhcCC-CccCEEEECCCCh
Confidence 35788899 9999999999999999866 555443 21 2466655 22 333321 2589999999875
Q ss_pred hH-HHHHHHHHHcCCc
Q 019500 111 FA-AAAILEAMEAELD 125 (340)
Q Consensus 111 ~v-~~~v~ea~~~Gvk 125 (340)
.. ..++..+-+.+.+
T Consensus 80 ~~n~~i~~~ar~~~p~ 95 (413)
T 3l9w_A 80 QTNLQLTEMVKEHFPH 95 (413)
T ss_dssp HHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHhCCC
Confidence 44 4445555555654
No 352
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=89.01 E-value=1.3 Score=45.68 Aligned_cols=91 Identities=13% Similarity=0.073 Sum_probs=55.7
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeC-CCCCCc---ee-----cCccc-------ccCHHHhhccCCCcEEEE
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVT-PKKGGT---EH-----LGLPV-------FNTVAEAKAETKANASAI 105 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~Vn-P~~~g~---~i-----~G~p~-------y~sl~dip~~~~vDlavi 105 (340)
..+|+|.|++|.+|+.+++.|.+.|++++.... +....+ ++ .++.. ..++.++.+..++|++|-
T Consensus 11 ~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vih 90 (699)
T 1z45_A 11 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIH 90 (699)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEEE
Confidence 346888999999999999999999998774432 211000 00 11221 123444443225899987
Q ss_pred ecChh------------------hHHHHHHHHHHcCCcEEEEecC
Q 019500 106 YVPPP------------------FAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 106 ~vp~~------------------~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
+.... ....+++.|.+.+++.+|.+++
T Consensus 91 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS 135 (699)
T 1z45_A 91 FAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSS 135 (699)
T ss_dssp CCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred CCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECc
Confidence 65321 1234667777788888776665
No 353
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=88.95 E-value=0.55 Score=43.99 Aligned_cols=81 Identities=16% Similarity=0.220 Sum_probs=49.9
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCC--eEEEeeCCCCCCceecC--------c------ccc-cCHHHhhccCCCcEEEEe
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGT--KMVGGVTPKKGGTEHLG--------L------PVF-NTVAEAKAETKANASAIY 106 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~--~vv~~VnP~~~g~~i~G--------~------p~y-~sl~dip~~~~vDlavi~ 106 (340)
+|.|+|+ |.+|..++..|.+.|+ +++ .++.+. +...+ . .+. .+.+++. +.|+++++
T Consensus 2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~-l~D~~~--~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~---~aDvViia 74 (319)
T 1a5z_A 2 KIGIVGL-GRVGSSTAFALLMKGFAREMV-LIDVDK--KRAEGDALDLIHGTPFTRRANIYAGDYADLK---GSDVVIVA 74 (319)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCCSEEE-EECSSH--HHHHHHHHHHHHHGGGSCCCEEEECCGGGGT---TCSEEEEC
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCeEE-EEeCCh--HHHHHHHHHHHhhhhhcCCcEEEeCCHHHhC---CCCEEEEc
Confidence 5777899 9999999988888887 654 566543 11111 1 111 2333332 58999999
Q ss_pred cChhh----------------HHHHHHHHHHcCCcEE-EEec
Q 019500 107 VPPPF----------------AAAAILEAMEAELDLV-VCIT 131 (340)
Q Consensus 107 vp~~~----------------v~~~v~ea~~~Gvk~v-vi~t 131 (340)
+|... ..++++++.+..-+.. +++|
T Consensus 75 v~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~t 116 (319)
T 1a5z_A 75 AGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT 116 (319)
T ss_dssp CCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 98633 4566666666655543 3344
No 354
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=88.95 E-value=0.78 Score=42.48 Aligned_cols=30 Identities=17% Similarity=0.182 Sum_probs=25.3
Q ss_pred EEEEeCCCCCcchHHHHHHHHc-CCeEEEee
Q 019500 44 RVICQGITGKNGTFHTEQAIEY-GTKMVGGV 73 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~-G~~vv~~V 73 (340)
+|+|.|++|.+|+.+++.|.+. |++++...
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~ 32 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNID 32 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEE
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEe
Confidence 5889999999999999999887 78876443
No 355
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=88.59 E-value=0.51 Score=45.80 Aligned_cols=66 Identities=17% Similarity=0.251 Sum_probs=41.0
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCc-ee---cCccc--ccCHHHhhccCCCcEEEEecCh
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT-EH---LGLPV--FNTVAEAKAETKANASAIYVPP 109 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~-~i---~G~p~--y~sl~dip~~~~vDlavi~vp~ 109 (340)
...+|+|+|+ |.+|+.+++.+...|.+.+..+|+..... +. .|..+ |.++.++.. ..|+++.++|.
T Consensus 166 ~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~--~aDvVi~at~~ 237 (404)
T 1gpj_A 166 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLA--RSDVVVSATAA 237 (404)
T ss_dssp TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHH--TCSEEEECCSS
T ss_pred cCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhc--CCCEEEEccCC
Confidence 3456788899 99999999999999984344788764100 11 13222 234444443 36666666654
No 356
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}
Probab=88.48 E-value=0.55 Score=42.38 Aligned_cols=85 Identities=24% Similarity=0.392 Sum_probs=51.1
Q ss_pred CcEEEEecChHHHHHHHHHHHhCCCCceEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEccCCCcHHHHHHHHHHh
Q 019500 181 GRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKES 260 (340)
Q Consensus 181 G~valvSQSG~l~~~~~~~~~~~giG~S~~vs~Gn~a~~dv~~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~~f~~a~ 260 (340)
.+|++|.-+|.+...- ..+.+. |...+.--++.+.|+.+.+||+.|+|+|.+++.|........+.+++
T Consensus 3 ~~iavi~i~G~I~~~~---------~~~~~~--~~~~~~~~~l~~~l~~a~~d~~v~~ivL~~~s~Gg~~~~~~~i~~~l 71 (240)
T 3rst_A 3 SKIAVLEVSGTIQDNG---------DSSSLL--GADGYNHRTFLKNLERAKDDKTVKGIVLKVNSPGGGVYESAEIHKKL 71 (240)
T ss_dssp CEEEEEEEESCBCCC--------------------CCCCHHHHHHHHHHHHHCTTEEEEEEEEEECCBCHHHHHHHHHHH
T ss_pred CeEEEEEEEEEEcCCC---------CcCccc--ccCCcCHHHHHHHHHHHHhCCCcEEEEEEecCCCCCHHHHHHHHHHH
Confidence 5688888888764321 001111 11211112355667777889999999999998665565555544443
Q ss_pred C---C--CCCEEEEEeCCCCC
Q 019500 261 G---T--EKPIVAFIAGLTAP 276 (340)
Q Consensus 261 r---~--~KPVvvlk~Grs~~ 276 (340)
+ . +||||+.--|....
T Consensus 72 ~~~~~~~~kPVia~v~g~a~~ 92 (240)
T 3rst_A 72 EEIKKETKKPIYVSMGSMAAS 92 (240)
T ss_dssp HHHHHHHCCCEEEEEEEEEET
T ss_pred HHHHHhCCCeEEEEECCeehH
Confidence 2 3 89999988775543
No 357
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=88.27 E-value=0.4 Score=45.62 Aligned_cols=62 Identities=18% Similarity=0.254 Sum_probs=46.4
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCce-ecCcccccCHHHhhccCCCcEEEEecCh
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE-HLGLPVFNTVAEAKAETKANASAIYVPP 109 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~-i~G~p~y~sl~dip~~~~vDlavi~vp~ 109 (340)
..|.|+|. |+.|+.+++.+..+|++++ ..+|...... -.+. .|.+++++.. ..|++++.+|-
T Consensus 142 ~tvGIiG~-G~IG~~va~~~~~fg~~v~-~~d~~~~~~~~~~~~-~~~~l~ell~--~sDivslh~Pl 204 (334)
T 3kb6_A 142 LTLGVIGT-GRIGSRVAMYGLAFGMKVL-CYDVVKREDLKEKGC-VYTSLDELLK--ESDVISLHVPY 204 (334)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCCHHHHHTTC-EECCHHHHHH--HCSEEEECCCC
T ss_pred cEEEEECc-chHHHHHHHhhcccCceee-ecCCccchhhhhcCc-eecCHHHHHh--hCCEEEEcCCC
Confidence 34667799 9999999999999999977 5677541011 1232 4679999987 48999999985
No 358
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=88.19 E-value=0.7 Score=41.67 Aligned_cols=86 Identities=16% Similarity=0.144 Sum_probs=52.1
Q ss_pred EEEeCCCCCcchHHHHHHHHcC-CeEEEeeCCCCCCc---eecCcccc------cCHHHhhcc---CCCcEEEEecChh-
Q 019500 45 VICQGITGKNGTFHTEQAIEYG-TKMVGGVTPKKGGT---EHLGLPVF------NTVAEAKAE---TKANASAIYVPPP- 110 (340)
Q Consensus 45 ViVvGasgk~G~~v~~~l~~~G-~~vv~~VnP~~~g~---~i~G~p~y------~sl~dip~~---~~vDlavi~vp~~- 110 (340)
|+|.|++|.+|+.+++.|.+.| ++++....... .. ...++.+. .+++++.+. .++|++|-+....
T Consensus 2 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~ 80 (310)
T 1eq2_A 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD-GTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSS 80 (310)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSS-GGGGHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCCC
T ss_pred EEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCC-CchhhhcCcceeccccccHHHHHHHHhccccCCCcEEEECccccc
Confidence 6788999999999999999999 77664433222 11 11122111 234444431 1489998875321
Q ss_pred ---------------hHHHHHHHHHHcCCcEEEEecC
Q 019500 111 ---------------FAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 111 ---------------~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
....+++.|.+.|+ .+|.+++
T Consensus 81 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 116 (310)
T 1eq2_A 81 TTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASS 116 (310)
T ss_dssp TTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred CcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEee
Confidence 13567778888888 4454554
No 359
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=88.15 E-value=2.9 Score=38.24 Aligned_cols=88 Identities=17% Similarity=0.149 Sum_probs=54.6
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEee-CCCCC----------C--cee----cCcccccCHHHhhccCCCcEEEE
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGV-TPKKG----------G--TEH----LGLPVFNTVAEAKAETKANASAI 105 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~V-nP~~~----------g--~~i----~G~p~y~sl~dip~~~~vDlavi 105 (340)
.+|+|.|++|-+|+.+++.|.+.|++++..+ ++... + ..+ ..+.-..++.++.+ .+|.++-
T Consensus 6 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih 83 (337)
T 2c29_D 6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK--GCTGVFH 83 (337)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT--TCSEEEE
T ss_pred CEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc--CCCEEEE
Confidence 3688999999999999999999999976443 33310 0 000 11222234555554 5898876
Q ss_pred ecCh--------h---------hHHHHHHHHHHcC-CcEEEEecC
Q 019500 106 YVPP--------P---------FAAAAILEAMEAE-LDLVVCITE 132 (340)
Q Consensus 106 ~vp~--------~---------~v~~~v~ea~~~G-vk~vvi~t~ 132 (340)
+..+ . ....+++.|.+.+ ++.+|..++
T Consensus 84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS 128 (337)
T 2c29_D 84 VATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSS 128 (337)
T ss_dssp CCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECC
T ss_pred eccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeee
Confidence 4311 1 1245667777777 888776665
No 360
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=88.11 E-value=0.85 Score=40.33 Aligned_cols=87 Identities=13% Similarity=0.118 Sum_probs=49.9
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeC-CCCCCceecCcccccCHHHhhccCCCcEEEEecChh------------
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVT-PKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPP------------ 110 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~Vn-P~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~------------ 110 (340)
+|+|.|++|.+|+.+++.|.+ |++++.... +.....-...+.-..++.++.+..++|++|-+....
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~ 80 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQGGYKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKA 80 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCTTCEECCTTSHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHH
T ss_pred EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCCCCceeccCCHHHHHHHHHhcCCCEEEECCcccChhhhhhCHHHH
Confidence 478889999999999999985 888764332 211000011122222344444322489888775321
Q ss_pred ------hHHHHHHHHHHcCCcEEEEecC
Q 019500 111 ------FAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 111 ------~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
....+++.|.+.|++ +|.+++
T Consensus 81 ~~~n~~~~~~l~~~~~~~~~~-iv~~SS 107 (273)
T 2ggs_A 81 YKINAEAVRHIVRAGKVIDSY-IVHIST 107 (273)
T ss_dssp HHHHTHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred HHHhHHHHHHHHHHHHHhCCe-EEEEec
Confidence 234567777777774 444554
No 361
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=88.02 E-value=1.8 Score=39.68 Aligned_cols=90 Identities=11% Similarity=-0.010 Sum_probs=54.1
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcC-------CeEEEeeC-CCCC----Ccee----cCcccccCHHHhhccCCCcEEEE
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYG-------TKMVGGVT-PKKG----GTEH----LGLPVFNTVAEAKAETKANASAI 105 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G-------~~vv~~Vn-P~~~----g~~i----~G~p~y~sl~dip~~~~vDlavi 105 (340)
..+|+|.|++|-+|+.+++.|.+.| ++++.... +... +..+ ..+.-..++.++.+ .++|++|-
T Consensus 14 ~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~~d~vih 92 (342)
T 2hrz_A 14 GMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVE-ARPDVIFH 92 (342)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHH-TCCSEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHh-cCCCEEEE
Confidence 3478899999999999999999989 67663322 2110 0111 12222334555543 25999988
Q ss_pred ecChh-----------------hHHHHHHHHHHcC-----CcEEEEecC
Q 019500 106 YVPPP-----------------FAAAAILEAMEAE-----LDLVVCITE 132 (340)
Q Consensus 106 ~vp~~-----------------~v~~~v~ea~~~G-----vk~vvi~t~ 132 (340)
+.... ....+++.|.+.+ ++.+|.+++
T Consensus 93 ~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS 141 (342)
T 2hrz_A 93 LAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSS 141 (342)
T ss_dssp CCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_pred CCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCc
Confidence 75421 1234566666665 777666664
No 362
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=88.00 E-value=0.9 Score=43.63 Aligned_cols=91 Identities=16% Similarity=0.152 Sum_probs=56.5
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcC-CeEEEeeCCCCCC-cee------------cCcccc-cC------HHHhhccCCCc
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYG-TKMVGGVTPKKGG-TEH------------LGLPVF-NT------VAEAKAETKAN 101 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G-~~vv~~VnP~~~g-~~i------------~G~p~y-~s------l~dip~~~~vD 101 (340)
.+|+|.|++|..|+.+++.|.+.| ++++ .++..... .++ .++..+ -+ +..+....++|
T Consensus 36 k~vLVTGatG~IG~~l~~~L~~~g~~~V~-~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D 114 (399)
T 3nzo_A 36 SRFLVLGGAGSIGQAVTKEIFKRNPQKLH-VVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQYD 114 (399)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTCCSEEE-EECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCCS
T ss_pred CEEEEEcCChHHHHHHHHHHHHCCCCEEE-EEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCCC
Confidence 357888999999999999999999 5665 55433200 000 122211 12 33333324699
Q ss_pred EEEEecChh--------------------hHHHHHHHHHHcCCcEEEEecCCC
Q 019500 102 ASAIYVPPP--------------------FAAAAILEAMEAELDLVVCITEGI 134 (340)
Q Consensus 102 lavi~vp~~--------------------~v~~~v~ea~~~Gvk~vvi~t~Gf 134 (340)
+++-+.... ....+++.|.+.|++.+|.+|+.-
T Consensus 115 ~Vih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~gv~r~V~iSS~~ 167 (399)
T 3nzo_A 115 YVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKKYFCVSTDK 167 (399)
T ss_dssp EEEECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHTTCSEEEEECCSC
T ss_pred EEEECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCC
Confidence 998764311 123578888899998888777753
No 363
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=87.90 E-value=1.3 Score=39.06 Aligned_cols=27 Identities=15% Similarity=0.196 Sum_probs=24.2
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEE
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMV 70 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv 70 (340)
.|+|.|+++.+|+.+++.|.+.|++++
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~ 29 (257)
T 1fjh_A 3 IIVISGCATGIGAATRKVLEAAGHQIV 29 (257)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEE
Confidence 467889999999999999999999966
No 364
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=87.87 E-value=0.67 Score=44.29 Aligned_cols=84 Identities=15% Similarity=0.156 Sum_probs=56.1
Q ss_pred cCCeEEEEeCCCCCcchHHHHHHHH-cCCeEEEeeCCCCCC-ce----ec---C--cccccCHHHhhccCCCcEEEEecC
Q 019500 40 DKNTRVICQGITGKNGTFHTEQAIE-YGTKMVGGVTPKKGG-TE----HL---G--LPVFNTVAEAKAETKANASAIYVP 108 (340)
Q Consensus 40 p~~iaViVvGasgk~G~~v~~~l~~-~G~~vv~~VnP~~~g-~~----i~---G--~p~y~sl~dip~~~~vDlavi~vp 108 (340)
++..+|.|+|+ |.+|+.+++.+.. .+.+.+...|++... ++ +. | +..+.+++++.. +.|+++.++|
T Consensus 127 ~~~~~v~iIGa-G~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~--~aDiVi~aTp 203 (350)
T 1x7d_A 127 PNARKMALIGN-GAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVK--GVDIITTVTA 203 (350)
T ss_dssp TTCCEEEEECC-STTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHT--TCSEEEECCC
T ss_pred ccCCeEEEECC-cHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHh--cCCEEEEecc
Confidence 45567888899 9999999888764 466656678876410 11 11 5 456789998876 5899999999
Q ss_pred hhhHHHHH-HHHHHcCCcE
Q 019500 109 PPFAAAAI-LEAMEAELDL 126 (340)
Q Consensus 109 ~~~v~~~v-~ea~~~Gvk~ 126 (340)
.....+++ .++++.|.+.
T Consensus 204 s~~~~pvl~~~~l~~G~~V 222 (350)
T 1x7d_A 204 DKAYATIITPDMLEPGMHL 222 (350)
T ss_dssp CSSEEEEECGGGCCTTCEE
T ss_pred CCCCCceecHHHcCCCCEE
Confidence 86322222 2455667654
No 365
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=87.87 E-value=2 Score=39.95 Aligned_cols=59 Identities=14% Similarity=0.098 Sum_probs=37.9
Q ss_pred EEEEeCCCCCcchHHHHHHHHc--CCeEEEeeCCCCCCceec--------C---------cccccCHHHhhccCCCcEEE
Q 019500 44 RVICQGITGKNGTFHTEQAIEY--GTKMVGGVTPKKGGTEHL--------G---------LPVFNTVAEAKAETKANASA 104 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~--G~~vv~~VnP~~~g~~i~--------G---------~p~y~sl~dip~~~~vDlav 104 (340)
+|+|+|+ |.+|..++..+.+. |++++ .++.+. +.+. + +....+.+++. +.|+++
T Consensus 2 kI~VIGa-G~vG~~la~~la~~~~g~~V~-l~D~~~--~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~l~---~aDvVi 74 (310)
T 1guz_A 2 KITVIGA-GNVGATTAFRLAEKQLARELV-LLDVVE--GIPQGKALDMYESGPVGLFDTKVTGSNDYADTA---NSDIVI 74 (310)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEE-EECSSS--SHHHHHHHHHHTTHHHHTCCCEEEEESCGGGGT---TCSEEE
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEE-EEeCCh--hHHHHHHHhHHhhhhcccCCcEEEECCCHHHHC---CCCEEE
Confidence 5778899 99999988887774 66644 555433 1111 1 12224566643 489999
Q ss_pred EecCh
Q 019500 105 IYVPP 109 (340)
Q Consensus 105 i~vp~ 109 (340)
+++|.
T Consensus 75 iav~~ 79 (310)
T 1guz_A 75 ITAGL 79 (310)
T ss_dssp ECCSC
T ss_pred EeCCC
Confidence 99964
No 366
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=87.85 E-value=1.3 Score=41.10 Aligned_cols=29 Identities=28% Similarity=0.528 Sum_probs=25.3
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEe
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGG 72 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~ 72 (340)
+|+|.|++|.+|+.+++.|.+.|++++..
T Consensus 3 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~ 31 (372)
T 1db3_A 3 VALITGVTGQDGSYLAEFLLEKGYEVHGI 31 (372)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence 57889999999999999999999987643
No 367
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=87.81 E-value=1.5 Score=40.38 Aligned_cols=87 Identities=14% Similarity=0.071 Sum_probs=52.4
Q ss_pred eEEEEeCCCCCcchHHHHHHHHc--CCeEEEeeCCCCCC--c---ee--cCccc-------ccCHHHhhccCCCcEEEEe
Q 019500 43 TRVICQGITGKNGTFHTEQAIEY--GTKMVGGVTPKKGG--T---EH--LGLPV-------FNTVAEAKAETKANASAIY 106 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~--G~~vv~~VnP~~~g--~---~i--~G~p~-------y~sl~dip~~~~vDlavi~ 106 (340)
.+|+|.|++|.+|+.+++.|.+. |++++........+ . ++ .++.. ..++.++.+ .+|++|-+
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~ 82 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA--KADAIVHY 82 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT--TCSEEEEC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhh--cCCEEEEC
Confidence 46889999999999999999987 88876443321100 0 11 12221 123445554 47988877
Q ss_pred cChh------------------hHHHHHHHHHHcCCcEEEEecC
Q 019500 107 VPPP------------------FAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 107 vp~~------------------~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
.... ....+++.|.+.|+ .+|.+++
T Consensus 83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS 125 (348)
T 1oc2_A 83 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVST 125 (348)
T ss_dssp CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred CcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecc
Confidence 5321 13456777778888 4454554
No 368
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=87.72 E-value=0.28 Score=51.44 Aligned_cols=87 Identities=15% Similarity=0.042 Sum_probs=52.6
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCcee----------------cC-------------cccccCHHHh
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH----------------LG-------------LPVFNTVAEA 94 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i----------------~G-------------~p~y~sl~di 94 (340)
+|.|+|+ |.||..++.++.+.|++++ .+|++. +.+ .| +....+++++
T Consensus 316 kV~VIGa-G~MG~~iA~~la~aG~~V~-l~D~~~--~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~~~ 391 (715)
T 1wdk_A 316 QAAVLGA-GIMGGGIAYQSASKGTPIL-MKDINE--HGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDF 391 (715)
T ss_dssp SEEEECC-HHHHHHHHHHHHHTTCCEE-EECSSH--HHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSSTTG
T ss_pred EEEEECC-ChhhHHHHHHHHhCCCEEE-EEECCH--HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCHHHH
Confidence 4667799 9999999999999999855 555543 111 12 2233455333
Q ss_pred hccCCCcEEEEecChhh--HHHHHHHHHHcC-CcEEE-EecCCCChh
Q 019500 95 KAETKANASAIYVPPPF--AAAAILEAMEAE-LDLVV-CITEGIPQH 137 (340)
Q Consensus 95 p~~~~vDlavi~vp~~~--v~~~v~ea~~~G-vk~vv-i~t~Gf~e~ 137 (340)
. +.|++|.++|.+. -.+++.+..+.- -+.++ ..|++++.+
T Consensus 392 ~---~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i~ 435 (715)
T 1wdk_A 392 G---NVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISIS 435 (715)
T ss_dssp G---GCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHH
T ss_pred C---CCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHH
Confidence 3 4899999999654 334555543321 12333 246777644
No 369
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=87.13 E-value=0.38 Score=43.92 Aligned_cols=104 Identities=12% Similarity=0.076 Sum_probs=61.6
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee---cCcccccCHHHhhccCCCcEEEEecChhhHH---HHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH---LGLPVFNTVAEAKAETKANASAIYVPPPFAA---AAI 116 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i---~G~p~y~sl~dip~~~~vDlavi~vp~~~v~---~~v 116 (340)
+++|+|+ |.+|+.++..|.+.|.+.++.+|++... +++ .+...+.++.+..+ +.|++|.++|....+ .+-
T Consensus 110 ~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~--~aDiVInatp~gm~p~~~~i~ 186 (253)
T 3u62_A 110 PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVK--KAKSLFNTTSVGMKGEELPVS 186 (253)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHH--TCSEEEECSSTTTTSCCCSCC
T ss_pred eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhc--CCCEEEECCCCCCCCCCCCCC
Confidence 6888899 9999999999999998544478876410 111 12224567777665 489999999864321 111
Q ss_pred HHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcE-EEccC
Q 019500 117 LEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (340)
Q Consensus 117 ~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~gir-viGPN 158 (340)
.+.++.+ ..++-+..+ ++... +.+ ++.|++ ++ ||
T Consensus 187 ~~~l~~~-~~V~Divy~--~T~ll---~~A-~~~G~~~~~-~G 221 (253)
T 3u62_A 187 DDSLKNL-SLVYDVIYF--DTPLV---VKA-RKLGVKHII-KG 221 (253)
T ss_dssp HHHHTTC-SEEEECSSS--CCHHH---HHH-HHHTCSEEE-CT
T ss_pred HHHhCcC-CEEEEeeCC--CcHHH---HHH-HHCCCcEEE-CC
Confidence 2334433 334444555 33322 222 455776 55 44
No 370
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=87.09 E-value=1.6 Score=40.21 Aligned_cols=33 Identities=18% Similarity=0.235 Sum_probs=27.4
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcCCeEEEee
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGV 73 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~V 73 (340)
+..+|+|.|++|.+|+.+++.|.+.|++++...
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~ 58 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVD 58 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEe
Confidence 345788999999999999999999999877443
No 371
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=87.03 E-value=1.9 Score=38.75 Aligned_cols=53 Identities=17% Similarity=0.294 Sum_probs=27.9
Q ss_pred cCCCCCCCCCCCCcccccCcCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeC
Q 019500 21 CGQSRSFTTAPPPAPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVT 74 (340)
Q Consensus 21 ~~~~~~~~~~~~~l~~lf~p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~Vn 74 (340)
.|..++|++.+-.-..+..-+.-.++|.|+++.+|+.+++.|.+.|++++ .++
T Consensus 11 ~~~~~~~~~~~~~~~~m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~-~~~ 63 (279)
T 1xg5_A 11 SGRENLYFQGHMARPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVV-GCA 63 (279)
T ss_dssp ------------CCTTCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred ccccceeeecccccccccccCCCEEEEECCCchHHHHHHHHHHHCCCEEE-EEE
Confidence 35566777664211112111223577889999999999999999999866 444
No 372
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=86.93 E-value=0.97 Score=41.97 Aligned_cols=89 Identities=15% Similarity=0.113 Sum_probs=52.7
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcC-CeEEEeeCCCCCC--ceecCccc------ccCHHHhhcc---CCCcEEEEecChh
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYG-TKMVGGVTPKKGG--TEHLGLPV------FNTVAEAKAE---TKANASAIYVPPP 110 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G-~~vv~~VnP~~~g--~~i~G~p~------y~sl~dip~~---~~vDlavi~vp~~ 110 (340)
.+|+|.|++|.+|+.+++.|.+.| ++++......... ..+.++.+ ..+++++.+. .++|++|-+....
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~Vih~A~~~ 126 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS 126 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccCceEeeecCcHHHHHHHHhhcccCCCCEEEECCccc
Confidence 457888999999999999999999 7766443322100 01112111 1234444431 1489998765321
Q ss_pred ----------------hHHHHHHHHHHcCCcEEEEecC
Q 019500 111 ----------------FAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 111 ----------------~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
....+++.|.+.|+ .+|.+++
T Consensus 127 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS 163 (357)
T 2x6t_A 127 STTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASS 163 (357)
T ss_dssp CTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcc
Confidence 23567778888888 4454554
No 373
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=86.90 E-value=1.8 Score=39.49 Aligned_cols=86 Identities=15% Similarity=0.116 Sum_probs=51.5
Q ss_pred EEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCCCce---ecCcccc--------cCHHHhhccCCCcEEEEecC---
Q 019500 44 RVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTE---HLGLPVF--------NTVAEAKAETKANASAIYVP--- 108 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~g~~---i~G~p~y--------~sl~dip~~~~vDlavi~vp--- 108 (340)
+|+|.|++|.+|+.+++.|.+. |++++........-.. ..++..+ ..++++.+ ++|++|-+..
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~~d~vih~A~~~~ 79 (345)
T 2bll_A 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK--KCDVVLPLVAIAT 79 (345)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH--HCSEEEECBCCCC
T ss_pred eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhcc--CCCEEEEcccccC
Confidence 5788999999999999999997 8987744332110000 1122221 12444444 4899887532
Q ss_pred hh---------------hHHHHHHHHHHcCCcEEEEecC
Q 019500 109 PP---------------FAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 109 ~~---------------~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
+. ....+++.|.+.| +.+|.+++
T Consensus 80 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS 117 (345)
T 2bll_A 80 PIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPST 117 (345)
T ss_dssp HHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECC
T ss_pred ccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEec
Confidence 11 1345677777888 66665665
No 374
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=86.71 E-value=1.7 Score=41.53 Aligned_cols=90 Identities=14% Similarity=0.115 Sum_probs=62.9
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCC-----------------CCCCc--------eecC--cccc--cCH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTP-----------------KKGGT--------EHLG--LPVF--NTV 91 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP-----------------~~~g~--------~i~G--~p~y--~sl 91 (340)
.++|.|.|. |++|+.+.|.+.+. .+++++.-+. +..|+ .+.| ++++ ++.
T Consensus 4 ~~kv~INGf-GrIGr~v~R~~~~~~~~~ivaind~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~inGk~I~v~~e~dp 82 (338)
T 3lvf_P 4 AVKVAINGF-GRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFSEPDA 82 (338)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSCG
T ss_pred cEEEEEECC-CcHHHHHHHHHHHCCCceEEEEecCCCHHHHHHHhccCCCCCCcCCeEEEcCCEEEECCEEEEEEEeccc
Confidence 578999999 99999999987775 4667743221 00010 1234 4455 457
Q ss_pred HHhhc-cCCCcEEEEecChhhHHHHHHHHHHcCCcEEEEecC
Q 019500 92 AEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 92 ~dip~-~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
+++|- +..+|+++-++......+-+...++.|.|.++|-.+
T Consensus 83 ~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISap 124 (338)
T 3lvf_P 83 SKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAP 124 (338)
T ss_dssp GGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSC
T ss_pred ccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCC
Confidence 77763 246999999999888888899999999998665333
No 375
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=86.64 E-value=0.85 Score=42.10 Aligned_cols=88 Identities=18% Similarity=0.168 Sum_probs=51.0
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCC--eEEEeeCCCCCCce------ecCccc------c--cCHHHhhccCCCcEEEE
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGT--KMVGGVTPKKGGTE------HLGLPV------F--NTVAEAKAETKANASAI 105 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~--~vv~~VnP~~~g~~------i~G~p~------y--~sl~dip~~~~vDlavi 105 (340)
..+|+|+|+ |.+|......|.+.|+ +++ .++.+....+ -.+.+. . .+.+++. +.|++++
T Consensus 7 ~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~aD~Vii 81 (319)
T 1lld_A 7 PTKLAVIGA-GAVGSTLAFAAAQRGIAREIV-LEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICR---DADMVVI 81 (319)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCSEEE-EECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGT---TCSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEE-EEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhC---CCCEEEE
Confidence 357888899 9999999988888887 654 5655420001 122221 1 1333332 5899999
Q ss_pred ecChhhHH----------------HHHHHHHHcCCcE-EEEecCCC
Q 019500 106 YVPPPFAA----------------AAILEAMEAELDL-VVCITEGI 134 (340)
Q Consensus 106 ~vp~~~v~----------------~~v~ea~~~Gvk~-vvi~t~Gf 134 (340)
+++....+ +++++..+.+-+. +++++-|.
T Consensus 82 ~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~ 127 (319)
T 1lld_A 82 TAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPV 127 (319)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCch
Confidence 99433222 5555555544443 44456555
No 376
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=86.56 E-value=0.33 Score=46.77 Aligned_cols=92 Identities=12% Similarity=0.055 Sum_probs=58.3
Q ss_pred cCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCC----------CC-------------Cc--eecC--ccccc--C
Q 019500 40 DKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPK----------KG-------------GT--EHLG--LPVFN--T 90 (340)
Q Consensus 40 p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~----------~~-------------g~--~i~G--~p~y~--s 90 (340)
+.+++|.|.|+ |++|+.+.+.+.+..+++++.-+|. ++ ++ .+.| ++++. +
T Consensus 19 ~~~~kVaInGf-GrIGr~vlr~l~e~~~~ivaIndl~d~~~~a~llkydS~hG~f~~~v~~~~~~l~i~Gk~I~v~~~~d 97 (356)
T 3hja_A 19 PGSMKLAINGF-GRIGRNVFKIAFERGIDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVESRDGAIVVDGREIKIIAERD 97 (356)
T ss_dssp ---CEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSS
T ss_pred CCCeEEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCCCHHHhhhhhccccCCCCCCCCEEEcCCEEEECCEEEEEEEcCC
Confidence 45789999999 9999999999888888877543342 00 01 1334 34443 4
Q ss_pred HHHhhc-cCCCcEEEEecChhhH----HHHHHHHHH-cCCcEEEEecC
Q 019500 91 VAEAKA-ETKANASAIYVPPPFA----AAAILEAME-AELDLVVCITE 132 (340)
Q Consensus 91 l~dip~-~~~vDlavi~vp~~~v----~~~v~ea~~-~Gvk~vvi~t~ 132 (340)
.+++|- +..+|+++-++..... .+-....++ .|.+.+||-.+
T Consensus 98 p~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsap 145 (356)
T 3hja_A 98 PKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVP 145 (356)
T ss_dssp GGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSC
T ss_pred hhhCCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCC
Confidence 555542 2368999888766555 555566677 88887665444
No 377
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=86.56 E-value=0.79 Score=45.09 Aligned_cols=33 Identities=18% Similarity=0.248 Sum_probs=27.9
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHc---CCeEEEee
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEY---GTKMVGGV 73 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~---G~~vv~~V 73 (340)
+..+|+|.|++|.+|+.+++.|.+. |++++..+
T Consensus 72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~ 107 (478)
T 4dqv_A 72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLV 107 (478)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEE
Confidence 4567899999999999999999988 88877544
No 378
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=86.50 E-value=2.3 Score=38.42 Aligned_cols=30 Identities=27% Similarity=0.347 Sum_probs=26.1
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEee
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGV 73 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~V 73 (340)
+|+|.|++|.+|+.+++.|.+.|++++..+
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~ 32 (322)
T 2p4h_X 3 RVCVTGGTGFLGSWIIKSLLENGYSVNTTI 32 (322)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEECChhHHHHHHHHHHHHCCCEEEEEE
Confidence 578889999999999999999999977544
No 379
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=86.31 E-value=2.5 Score=37.41 Aligned_cols=72 Identities=8% Similarity=0.017 Sum_probs=46.4
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChhhHHHHHHHHHHc-
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEAMEA- 122 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ea~~~- 122 (340)
.|+|.|+++.+|+.+++.|.+.|++++ .++.+. +.... ....+| .+..+.+.++++++.+.
T Consensus 24 ~vlITGas~gIG~~la~~l~~~G~~V~-~~~r~~--~~~~~-----------~~~~~d----~~d~~~v~~~~~~~~~~~ 85 (251)
T 3orf_A 24 NILVLGGSGALGAEVVKFFKSKSWNTI-SIDFRE--NPNAD-----------HSFTIK----DSGEEEIKSVIEKINSKS 85 (251)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEE-EEESSC--CTTSS-----------EEEECS----CSSHHHHHHHHHHHHTTT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEE-EEeCCc--ccccc-----------cceEEE----eCCHHHHHHHHHHHHHHc
Confidence 577889999999999999999999966 444332 11110 000244 45667777788777765
Q ss_pred -CCcEEEEecCCC
Q 019500 123 -ELDLVVCITEGI 134 (340)
Q Consensus 123 -Gvk~vvi~t~Gf 134 (340)
++.. +|...|.
T Consensus 86 g~iD~-li~~Ag~ 97 (251)
T 3orf_A 86 IKVDT-FVCAAGG 97 (251)
T ss_dssp CCEEE-EEECCCC
T ss_pred CCCCE-EEECCcc
Confidence 3444 4456663
No 380
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=86.30 E-value=1.7 Score=40.28 Aligned_cols=81 Identities=16% Similarity=0.122 Sum_probs=46.1
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCC--eEEEeeCCCCC---Cc--ee-cC------cccc-cCHHHhhccCCCcEEEEecC
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGT--KMVGGVTPKKG---GT--EH-LG------LPVF-NTVAEAKAETKANASAIYVP 108 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~--~vv~~VnP~~~---g~--~i-~G------~p~y-~sl~dip~~~~vDlavi~vp 108 (340)
+|+|+|+ |.+|...+..+...|+ +++ .++.+.. +. ++ .+ .++. .+.+++. +.|++|++++
T Consensus 2 kI~VIGa-G~vG~~la~~la~~g~~~eV~-L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~~---~aDvVIi~~~ 76 (304)
T 2v6b_A 2 KVGVVGT-GFVGSTAAFALVLRGSCSELV-LVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSELA---DAQVVILTAG 76 (304)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEE-EECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGGT---TCSEEEECC-
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEE-EEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHhC---CCCEEEEcCC
Confidence 6778899 9999998888888787 644 5554331 00 01 11 1121 2333433 4899999995
Q ss_pred hhh----------------HHHHHHHHHHcCCcEEEE
Q 019500 109 PPF----------------AAAAILEAMEAELDLVVC 129 (340)
Q Consensus 109 ~~~----------------v~~~v~ea~~~Gvk~vvi 129 (340)
... ..++++++.+.+-+.+++
T Consensus 77 ~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi 113 (304)
T 2v6b_A 77 ANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLL 113 (304)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHCSSSEEE
T ss_pred CCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEE
Confidence 432 355666666665554433
No 381
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=86.28 E-value=0.65 Score=46.63 Aligned_cols=67 Identities=18% Similarity=0.087 Sum_probs=47.6
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCce---ecCcccccCHHHhhccCCCcEEEEecChhhHH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE---HLGLPVFNTVAEAKAETKANASAIYVPPPFAA 113 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~---i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~ 113 (340)
..+|+|+|+ |.+|..+++.++.+|.+++ .+++.....+ -.|.. +.+++++.. ..|+++++++.....
T Consensus 274 GktV~IiG~-G~IG~~~A~~lka~Ga~Vi-v~d~~~~~~~~A~~~Ga~-~~~l~e~l~--~aDvVi~atgt~~~i 343 (494)
T 3ce6_A 274 GKKVLICGY-GDVGKGCAEAMKGQGARVS-VTEIDPINALQAMMEGFD-VVTVEEAIG--DADIVVTATGNKDII 343 (494)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHHTTCE-ECCHHHHGG--GCSEEEECSSSSCSB
T ss_pred cCEEEEEcc-CHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHcCCE-EecHHHHHh--CCCEEEECCCCHHHH
Confidence 345778898 9999999999999999855 6666531011 24654 346777765 589999999876643
No 382
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=86.25 E-value=1.2 Score=42.48 Aligned_cols=89 Identities=16% Similarity=0.048 Sum_probs=61.8
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHc---CCeEEEeeCCCC-----------------CC------c--eecC--cccc--c
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEY---GTKMVGGVTPKK-----------------GG------T--EHLG--LPVF--N 89 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~---G~~vv~~VnP~~-----------------~g------~--~i~G--~p~y--~ 89 (340)
.++|.|.|. |++|+.+.|.+.+. ..++++.-+|.. .| + .+.| ++++ +
T Consensus 2 ~~kv~INGf-GrIGr~v~Ra~~~~~~~~~~ivaiNd~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~ 80 (335)
T 3doc_A 2 AVRVAINGF-GRIGRNILRAIVESGRTDIQVVAINDLGPVETNAHLLRYDSVHGRFPKEVEVAGDTIDVGYGPIKVHAVR 80 (335)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHTTCCSEEEEEEECSSCHHHHHHHHHEETTTEECSSCCEECSSEEESSSSEEEEECCS
T ss_pred CEEEEEECC-CcHHHHHHHHHHhccCCCeEEEEEeCCCCHHHHHHHhcccCCCCCCCCeEEEecCEEEECCEEEEEEeec
Confidence 468999999 99999999988775 456775444411 00 0 1233 3454 3
Q ss_pred CHHHhhc-cCCCcEEEEecChhhHHHHHHHHHHcCCcEEEEec
Q 019500 90 TVAEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVCIT 131 (340)
Q Consensus 90 sl~dip~-~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t 131 (340)
+.+++|- +.++|+++-++......+-....++.|.|.++|-.
T Consensus 81 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsa 123 (335)
T 3doc_A 81 NPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSA 123 (335)
T ss_dssp STTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESS
T ss_pred ccccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECC
Confidence 4666652 23699999999888888888999999999866533
No 383
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=86.08 E-value=2.1 Score=40.21 Aligned_cols=32 Identities=16% Similarity=0.056 Sum_probs=26.4
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcCCeEEEe
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGG 72 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~ 72 (340)
+..+|+|.|++|-+|+.+++.|.+.|++++..
T Consensus 10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~ 41 (404)
T 1i24_A 10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIV 41 (404)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEE
Confidence 45578899999999999999999999987743
No 384
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=86.00 E-value=0.62 Score=48.86 Aligned_cols=87 Identities=11% Similarity=-0.041 Sum_probs=52.4
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCcee----------------cC-------------cccccCHHHh
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH----------------LG-------------LPVFNTVAEA 94 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i----------------~G-------------~p~y~sl~di 94 (340)
+|.|+|+ |.||..++.++.+.|++++ .+|.+. +.+ .| +....+++++
T Consensus 314 kV~VIGa-G~MG~~iA~~la~aG~~V~-l~D~~~--~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~~~ 389 (725)
T 2wtb_A 314 KVAIIGG-GLMGSGIATALILSNYPVI-LKEVNE--KFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYESF 389 (725)
T ss_dssp CEEEECC-SHHHHHHHHHHHTTTCCEE-EECSSH--HHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSSGGG
T ss_pred EEEEEcC-CHhhHHHHHHHHhCCCEEE-EEECCH--HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCHHHH
Confidence 4667799 9999999999999999855 555432 111 11 2233455443
Q ss_pred hccCCCcEEEEecChhh--HHHHHHHHHHcC-CcEEE-EecCCCChh
Q 019500 95 KAETKANASAIYVPPPF--AAAAILEAMEAE-LDLVV-CITEGIPQH 137 (340)
Q Consensus 95 p~~~~vDlavi~vp~~~--v~~~v~ea~~~G-vk~vv-i~t~Gf~e~ 137 (340)
. +.|++|.++|.+. ..+++.+..+.- -+.++ .-|++++.+
T Consensus 390 ~---~aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i~ 433 (725)
T 2wtb_A 390 R---DVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDLN 433 (725)
T ss_dssp T---TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH
T ss_pred C---CCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCHH
Confidence 3 4899999999875 234545443321 22233 346677644
No 385
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=85.66 E-value=3 Score=37.99 Aligned_cols=88 Identities=9% Similarity=0.018 Sum_probs=51.9
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcC--CeEEEeeCCC-CCC-cee------cCccc-------ccCHHHhhccCCCcEEEE
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYG--TKMVGGVTPK-KGG-TEH------LGLPV-------FNTVAEAKAETKANASAI 105 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G--~~vv~~VnP~-~~g-~~i------~G~p~-------y~sl~dip~~~~vDlavi 105 (340)
++|+|.|++|.+|+.+++.|.+.| ++++...... ... +.+ .++.. ..++.++.. ++|++|-
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih 81 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVR--KVDGVVH 81 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHH--TCSEEEE
T ss_pred CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhh--CCCEEEE
Confidence 468899999999999999999876 7766433211 100 111 11211 123444443 5899887
Q ss_pred ecChh------------------hHHHHHHHHHHcCC-cEEEEecC
Q 019500 106 YVPPP------------------FAAAAILEAMEAEL-DLVVCITE 132 (340)
Q Consensus 106 ~vp~~------------------~v~~~v~ea~~~Gv-k~vvi~t~ 132 (340)
+.... ....+++.|.+.+. +.+|.+++
T Consensus 82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (336)
T 2hun_A 82 LAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVST 127 (336)
T ss_dssp CCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecc
Confidence 65421 13356677777775 46565554
No 386
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=85.49 E-value=1.4 Score=38.35 Aligned_cols=28 Identities=18% Similarity=0.241 Sum_probs=24.8
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEE
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVG 71 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~ 71 (340)
+|+|.|++|.+|+.+++.|.+.|++++.
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~g~~V~~ 30 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARAGHTVIG 30 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEeCCCcHHHHHHHHHHHhCCCEEEE
Confidence 4788999999999999999999998663
No 387
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1
Probab=85.08 E-value=0.92 Score=40.42 Aligned_cols=53 Identities=15% Similarity=0.215 Sum_probs=42.3
Q ss_pred HHHHHHhhcCCCccEEEEEEccCCCcHHHHHHHHHHhC-CCCCEEEEEeCCCCC
Q 019500 224 VDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESG-TEKPIVAFIAGLTAP 276 (340)
Q Consensus 224 ~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~~f~~a~r-~~KPVvvlk~Grs~~ 276 (340)
.+.|+++.+|+..+.|.||+.+.|-....+....++++ .+|||+++-.|....
T Consensus 63 ~~~L~~l~~~~~~k~I~l~InSPGG~v~ag~~I~~~i~~~~~pV~t~v~G~AaS 116 (218)
T 1y7o_A 63 IAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAAS 116 (218)
T ss_dssp HHHHHHHHHHCTTSCEEEEEEECCBCHHHHHHHHHHHHHSSSCEEEEEEEEEET
T ss_pred HHHHHHHHhcCCCCCEEEEEECcCCCHHHHHHHHHHHHhcCCCEEEEEccEeHH
Confidence 34566778889999999999987766778888887776 789999999875543
No 388
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=85.06 E-value=1.1 Score=42.22 Aligned_cols=80 Identities=13% Similarity=0.162 Sum_probs=54.3
Q ss_pred cCCeEEEEeCCCCCcchHHHHHHHH-cCCeEEEeeCCCCCC-ce----e----cCcccccCHHHhhccCCCcEEEEecCh
Q 019500 40 DKNTRVICQGITGKNGTFHTEQAIE-YGTKMVGGVTPKKGG-TE----H----LGLPVFNTVAEAKAETKANASAIYVPP 109 (340)
Q Consensus 40 p~~iaViVvGasgk~G~~v~~~l~~-~G~~vv~~VnP~~~g-~~----i----~G~p~y~sl~dip~~~~vDlavi~vp~ 109 (340)
++..+|.|+|+ |.+|+.+++.+.+ .+.+.++..|+.... ++ . ..+. +.+++++. + .|+++.+||.
T Consensus 123 ~~~~~v~iIGa-G~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~-~~~~~e~v-~--aDvVi~aTp~ 197 (322)
T 1omo_A 123 KNSSVFGFIGC-GTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-VQPAEEAS-R--CDVLVTTTPS 197 (322)
T ss_dssp TTCCEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-ECCHHHHT-S--SSEEEECCCC
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE-ECCHHHHh-C--CCEEEEeeCC
Confidence 45667888899 9999999998887 466666688876411 11 1 1244 78888877 4 8999999997
Q ss_pred hhHHHHH-HHHHHcCCcE
Q 019500 110 PFAAAAI-LEAMEAELDL 126 (340)
Q Consensus 110 ~~v~~~v-~ea~~~Gvk~ 126 (340)
.. +++ .++++.|.+.
T Consensus 198 ~~--pv~~~~~l~~G~~V 213 (322)
T 1omo_A 198 RK--PVVKAEWVEEGTHI 213 (322)
T ss_dssp SS--CCBCGGGCCTTCEE
T ss_pred CC--ceecHHHcCCCeEE
Confidence 53 223 3455666544
No 389
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=85.00 E-value=1.5 Score=42.02 Aligned_cols=90 Identities=18% Similarity=0.113 Sum_probs=63.8
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCC-----------------CC------c--eecC--cccc--cCH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKK-----------------GG------T--EHLG--LPVF--NTV 91 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~-----------------~g------~--~i~G--~p~y--~sl 91 (340)
+++|.|.|. |++|+.+.|.+.+. ..++++.-+|.. .| + .+.| ++++ ++.
T Consensus 4 ~~kv~INGf-GrIGr~v~Ra~~~~~~~~ivaINd~~d~~~~a~llkyDS~hG~f~~~v~~~~~~l~inGk~I~v~~e~dp 82 (345)
T 4dib_A 4 MTRVAINGF-GRIGRMVFRQAIKESAFEIVAINASYPSETLAHLIKYDTVHGKFDGTVEAFEDHLLVDGKMIRLLNNRDP 82 (345)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTTCSSSEEEEEECSSCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEEEECCSCG
T ss_pred cEEEEEECC-CcHHHHHHHHHHhCCCceEEEEcCCCCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEEEeecCCh
Confidence 578999999 99999999987775 577885444421 00 0 1234 3455 457
Q ss_pred HHhhc-cCCCcEEEEecChhhHHHHHHHHHHcCCcEEEEecC
Q 019500 92 AEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 92 ~dip~-~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
+++|- +..+|+++-++......+-....++.|.|.++|-.+
T Consensus 83 ~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISap 124 (345)
T 4dib_A 83 KELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAP 124 (345)
T ss_dssp GGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred hhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCC
Confidence 77763 236999999998888888889999999998765433
No 390
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=84.80 E-value=1.5 Score=41.93 Aligned_cols=89 Identities=15% Similarity=0.073 Sum_probs=61.6
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCC-----------C-------CC-c---------eecC--cccc--
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPK-----------K-------GG-T---------EHLG--LPVF-- 88 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~-----------~-------~g-~---------~i~G--~p~y-- 88 (340)
.++|.|.|. |++|+.+.|.+.+. ..++++.-+|. + .| + .+.| ++++
T Consensus 3 ~~kv~INGf-GrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~~v~~~~~~~l~i~Gk~I~v~~e 81 (337)
T 3v1y_O 3 KIKIGINGF-GRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGI 81 (337)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCSSEEEEEEECTTSCHHHHHHHHHCCTTTCCCCSSCEEEEETTEEEETTEEEEEECC
T ss_pred ceEEEEECC-ChHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhhhccCCCcccCceEEEcCCcEEEECCEEEEEEEe
Confidence 478999999 99999999988775 46778555561 1 11 0 1223 3444
Q ss_pred cCHHHhhc-cCCCcEEEEecChhhHHHHHHHHHHcCCcEEEEec
Q 019500 89 NTVAEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVCIT 131 (340)
Q Consensus 89 ~sl~dip~-~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi~t 131 (340)
.+.+++|- +..+|+++-++......+-....++.|.|.++|-.
T Consensus 82 ~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsa 125 (337)
T 3v1y_O 82 RNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISA 125 (337)
T ss_dssp SSGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESS
T ss_pred cCcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECC
Confidence 34666552 12689999999888888888889999999866433
No 391
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=84.01 E-value=0.99 Score=44.66 Aligned_cols=69 Identities=16% Similarity=0.118 Sum_probs=47.5
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC----------ceecCcccccC-HHHhhccCCCcEEEEecCh
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG----------TEHLGLPVFNT-VAEAKAETKANASAIYVPP 109 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g----------~~i~G~p~y~s-l~dip~~~~vDlavi~vp~ 109 (340)
..++|+|+|+ |+.|+.+++.|.+.|++++ .|+.+..- ..+.|-.+.++ |.+.-- .+.|+++.+++.
T Consensus 2 ~~M~iiI~G~-G~vG~~la~~L~~~~~~v~-vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi-~~ad~~ia~t~~ 78 (461)
T 4g65_A 2 NAMKIIILGA-GQVGGTLAENLVGENNDIT-IVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGA-QDADMLVAVTNT 78 (461)
T ss_dssp CCEEEEEECC-SHHHHHHHHHTCSTTEEEE-EEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTT-TTCSEEEECCSC
T ss_pred CcCEEEEECC-CHHHHHHHHHHHHCCCCEE-EEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCC-CcCCEEEEEcCC
Confidence 4678999999 9999999999998898866 67655310 11334344433 555432 268999999988
Q ss_pred hhH
Q 019500 110 PFA 112 (340)
Q Consensus 110 ~~v 112 (340)
+.+
T Consensus 79 De~ 81 (461)
T 4g65_A 79 DET 81 (461)
T ss_dssp HHH
T ss_pred hHH
Confidence 765
No 392
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=83.82 E-value=1.1 Score=41.43 Aligned_cols=86 Identities=10% Similarity=-0.002 Sum_probs=51.7
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcC-----CeEEEeeCCCCCCc-eecCccc-------ccCHHHhhccCC-CcEEEEecC
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYG-----TKMVGGVTPKKGGT-EHLGLPV-------FNTVAEAKAETK-ANASAIYVP 108 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G-----~~vv~~VnP~~~g~-~i~G~p~-------y~sl~dip~~~~-vDlavi~vp 108 (340)
.+|+|.|++|.+|+.+++.|.+.| ++++.......... .-.++.. ..++.++.+... +|+++-+..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~a~ 81 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYVTW 81 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHHhcCCCCCEEEECCC
Confidence 368889999999999999999888 88775443221100 0012221 223445444222 899988743
Q ss_pred h-------------hhHHHHHHHHHHc--CCcEEE
Q 019500 109 P-------------PFAAAAILEAMEA--ELDLVV 128 (340)
Q Consensus 109 ~-------------~~v~~~v~ea~~~--Gvk~vv 128 (340)
. .....+++.|.+. +++.++
T Consensus 82 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v 116 (364)
T 2v6g_A 82 ANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHIS 116 (364)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEE
T ss_pred CCcchHHHHHHHhHHHHHHHHHHHHHhccccceEE
Confidence 1 2245566667666 788765
No 393
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=83.75 E-value=7.4 Score=34.59 Aligned_cols=29 Identities=17% Similarity=0.169 Sum_probs=25.3
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEE
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMV 70 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv 70 (340)
.-.++|.|+++.+|+.+++.|.+.|++++
T Consensus 34 ~k~vlITGasggIG~~la~~L~~~G~~V~ 62 (279)
T 3ctm_A 34 GKVASVTGSSGGIGWAVAEAYAQAGADVA 62 (279)
T ss_dssp TCEEEETTTTSSHHHHHHHHHHHHTCEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEE
Confidence 34578899999999999999999999966
No 394
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A
Probab=83.62 E-value=1.2 Score=39.32 Aligned_cols=66 Identities=15% Similarity=0.182 Sum_probs=48.4
Q ss_pred EeecCCCCCCCCC---HHHHHHHhhcCCCccEEEEEEccCCCcHHHHHHHHHHhC-CCCCEEEEEeCCCCC
Q 019500 210 CVGIGGDPFNGTN---FVDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESG-TEKPIVAFIAGLTAP 276 (340)
Q Consensus 210 ~vs~Gn~a~~dv~---~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~~f~~a~r-~~KPVvvlk~Grs~~ 276 (340)
+|-+++.. .+.+ +.+.|.++.+|+..+.|.+|+.+.|-....+....++++ .+|||+++-.|....
T Consensus 29 ii~l~G~I-~~~~a~~i~~~L~~~~~~~~~k~I~l~InSPGG~v~a~~~I~~~i~~~~~pV~~~v~g~AaS 98 (208)
T 2cby_A 29 IIFLGSEV-NDEIANRLCAQILLLAAEDASKDISLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAAS 98 (208)
T ss_dssp EEEECSCB-CHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHHHCSSCEEEEEEEEEET
T ss_pred EEEEcCEE-CHHHHHHHHHHHHHHHhCCCCCCEEEEEECCCCCHHHHHHHHHHHHhcCCCEEEEECcEeHH
Confidence 46666653 2222 344455668889999999999998877888888888876 679999998775443
No 395
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=83.53 E-value=31 Score=36.28 Aligned_cols=225 Identities=13% Similarity=0.109 Sum_probs=113.5
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCcee-cCcc-cc--c--C----HHHhhccCCCcEEEEecChhh
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH-LGLP-VF--N--T----VAEAKAETKANASAIYVPPPF 111 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i-~G~p-~y--~--s----l~dip~~~~vDlavi~vp~~~ 111 (340)
.-+|+|.|++|..|...++..+..|.+++..+.+.+. +.. .|.. ++ . + +.++.....+|+++.++..+.
T Consensus 346 G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~k~-~~l~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~gg~~ 424 (795)
T 3slk_A 346 GESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKW-QAVELSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGEF 424 (795)
T ss_dssp TCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGGGG-GGSCSCGGGEECSSSSTHHHHHHHHSCSSCCSEEEECCCTTT
T ss_pred CCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChHHh-hhhhcChhheeecCChhHHHHHHHHcCCCCeEEEEECCCcHH
Confidence 3468889999999999999988899987755443320 111 2211 11 1 2 223322236999999998876
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCh---------------------------hhHHHHHHHHhccCCcEEEccCCCCccc
Q 019500 112 AAAAILEAMEAELDLVVCITEGIPQ---------------------------HDMVRVKAALNNQSKTRLVGPNCPGVIK 164 (340)
Q Consensus 112 v~~~v~ea~~~Gvk~vvi~t~Gf~e---------------------------~~~~~l~~~aar~~girviGPNc~Gi~~ 164 (340)
.... -+|++.+=+.+.+....... +...++.+.. ++..++.+=-....+-.
T Consensus 425 ~~~~-l~~l~~~Gr~v~iG~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~-~~g~l~p~~~~~~~l~~ 502 (795)
T 3slk_A 425 ADAS-LRMLPRGGRFLELGKTDVRDPVEVADAHPGVSYQAFDTVEAGPQRIGEMLHELVELF-EGRVLEPLPVTAWDVRQ 502 (795)
T ss_dssp THHH-HTSCTTCEEEEECCSTTCCCHHHHHHHSSSEEEEECCGGGGHHHHHHHHHHHHHHHH-HTTSCCCCCEEEEEGGG
T ss_pred HHHH-HHHhcCCCEEEEeccccccCcccccccCCCCEEEEeeccccCHHHHHHHHHHHHHHH-HcCCcCCCcceeEcHHH
Confidence 6443 45555554443322211100 0112222333 23333211000000000
Q ss_pred CC-Cc----------ccccCCCCCCCCCcEEEEe-cChHHHHHHHHHHH-hCCCCceEEeecCCCCCCCCCHHHHHHHhh
Q 019500 165 PG-EC----------KIGIMPGYIHKPGRIGIVS-RSGTLTYEAVFQTT-AVGLGQSTCVGIGGDPFNGTNFVDCVTKFI 231 (340)
Q Consensus 165 p~-~~----------~~~~~~~~~~~~G~valvS-QSG~l~~~~~~~~~-~~giG~S~~vs~Gn~a~~dv~~~d~l~~l~ 231 (340)
-. -+ .+-+..+..+.+|.+.+|+ -+|+++.++..|+. ++|. .+++-++-..-..-...++++.+.
T Consensus 503 ~~eA~~~l~~g~~~GKvVl~~~~~~~~~~~~lItGg~~GlG~aiA~~la~~~Ga--~~vvl~~R~~~~~~~~~~~~~~l~ 580 (795)
T 3slk_A 503 APEALRHLSQARHVGKLVLTMPPVWDAAGTVLVTGGTGALGAEVARHLVIERGV--RNLVLVSRRGPAASGAAELVAQLT 580 (795)
T ss_dssp HHHHHHHHHHTCCCBEEEEECCCCCCTTSEEEEETTTSHHHHHHHHHHHHTSSC--CEEEEEESSGGGSTTHHHHHHHHH
T ss_pred HHHHHHHHhcCCccceEEEecCcccccccceeeccCCCCcHHHHHHHHHHHcCC--cEEEEeccCccchHHHHHHHHHHH
Confidence 00 00 0001112236788888887 56899999999887 5654 333333221000234567777775
Q ss_pred cCCCccEEEEEEccCCCcHHHHHHHHHHhCCCCCE--EEEEeCCC
Q 019500 232 ADPQTEGIILIGEIGGTAEEDAAALIKESGTEKPI--VAFIAGLT 274 (340)
Q Consensus 232 ~Dp~T~~I~ly~E~~g~~~~~~~~f~~a~r~~KPV--vvlk~Grs 274 (340)
+. ..++..+.+.. . ...+.+++++.+...-|| ++.-+|-.
T Consensus 581 ~~-G~~v~~~~~Dv-s-d~~~v~~~~~~~~~~~~id~lVnnAGv~ 622 (795)
T 3slk_A 581 AY-GAEVSLQACDV-A-DRETLAKVLASIPDEHPLTAVVHAAGVL 622 (795)
T ss_dssp HT-TCEEEEEECCT-T-CHHHHHHHHHTSCTTSCEEEEEECCCCC
T ss_pred hc-CCcEEEEEeec-C-CHHHHHHHHHHHHHhCCCEEEEECCCcC
Confidence 53 45666555553 1 255667777766522265 44445543
No 396
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=83.53 E-value=0.84 Score=43.96 Aligned_cols=79 Identities=13% Similarity=0.075 Sum_probs=49.2
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCcee------cCcccccCHHHhhccCCCcEEEEecChhhHHHH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH------LGLPVFNTVAEAKAETKANASAIYVPPPFAAAA 115 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i------~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~ 115 (340)
..+|+|+|+ |++|...++.|.+.|.+++ ..|+.. +.+ .|... -+.+++.. .+.|+++.+.....+-.
T Consensus 173 GktV~V~G~-G~VG~~~A~~L~~~GakVv-v~D~~~--~~l~~~a~~~ga~~-v~~~~ll~-~~~DIvip~a~~~~I~~- 245 (364)
T 1leh_A 173 GLAVSVQGL-GNVAKALCKKLNTEGAKLV-VTDVNK--AAVSAAVAEEGADA-VAPNAIYG-VTCDIFAPCALGAVLND- 245 (364)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCH--HHHHHHHHHHCCEE-CCGGGTTT-CCCSEEEECSCSCCBST-
T ss_pred cCEEEEECc-hHHHHHHHHHHHHCCCEEE-EEcCCH--HHHHHHHHHcCCEE-EChHHHhc-cCCcEeeccchHHHhCH-
Confidence 345778899 9999999999999999977 777654 221 13322 24455544 25899988754433211
Q ss_pred HHHHHHcCCcEEE
Q 019500 116 ILEAMEAELDLVV 128 (340)
Q Consensus 116 v~ea~~~Gvk~vv 128 (340)
+.+...+.+.++
T Consensus 246 -~~~~~lg~~iV~ 257 (364)
T 1leh_A 246 -FTIPQLKAKVIA 257 (364)
T ss_dssp -THHHHCCCSEEC
T ss_pred -HHHHhCCCcEEE
Confidence 123334777644
No 397
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=83.43 E-value=2.3 Score=38.32 Aligned_cols=35 Identities=17% Similarity=0.148 Sum_probs=28.0
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCC
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK 77 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~ 77 (340)
..+|+|+|+ |..|..++++|...|...+..+|+..
T Consensus 28 ~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 446788899 78999999999999987555777653
No 398
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=83.41 E-value=4.4 Score=35.33 Aligned_cols=32 Identities=9% Similarity=0.069 Sum_probs=26.6
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCC
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTP 75 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP 75 (340)
-.++|.|+++.+|+.+++.|.+.|++++ .++.
T Consensus 12 k~vlITGasggiG~~la~~l~~~G~~V~-~~~r 43 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFAASGARLI-LIDR 43 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEE-EEeC
Confidence 3578889999999999999999999866 4443
No 399
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=83.07 E-value=4.3 Score=38.49 Aligned_cols=116 Identities=14% Similarity=0.100 Sum_probs=61.3
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceec-----------CcccccCHHHhhccCCCcEEEEecChh
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHL-----------GLPVFNTVAEAKAETKANASAIYVPPP 110 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~-----------G~p~y~sl~dip~~~~vDlavi~vp~~ 110 (340)
..+|+|+|+ |..|..++++|...|..-+..+|+..-..+-. |.+--..+.+-..+.++++-+.+.+..
T Consensus 36 ~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~~~ 114 (346)
T 1y8q_A 36 ASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDTED 114 (346)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEECSC
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEecc
Confidence 456788899 78999999999999987555787754211111 211111122222222455545444432
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCCCCcc
Q 019500 111 FAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVI 163 (340)
Q Consensus 111 ~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc~Gi~ 163 (340)
... ...+.. .+...+| .+.. +.+....+.+.+ +++++.++--.+.|+.
T Consensus 115 ~~~-~~~~~~-~~~dvVv-~~~d-~~~~r~~ln~~~-~~~~ip~i~~~~~G~~ 162 (346)
T 1y8q_A 115 IEK-KPESFF-TQFDAVC-LTCC-SRDVIVKVDQIC-HKNSIKFFTGDVFGYH 162 (346)
T ss_dssp GGG-CCHHHH-TTCSEEE-EESC-CHHHHHHHHHHH-HHTTCEEEEEEEEBTE
T ss_pred cCc-chHHHh-cCCCEEE-EcCC-CHHHHHHHHHHH-HHcCCCEEEEeecccE
Confidence 211 112222 3566654 3432 223334455555 7788888766666654
No 400
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=82.58 E-value=0.86 Score=45.58 Aligned_cols=64 Identities=14% Similarity=0.007 Sum_probs=45.8
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCc---eecCcccccCHHHhhccCCCcEEEEecChhhH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT---EHLGLPVFNTVAEAKAETKANASAIYVPPPFA 112 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~---~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v 112 (340)
+|.|+|. |++|+.+++.++.+|++++ .+||..... .-.|+. +.+++++.. ..|++++++.....
T Consensus 259 tVgIIG~-G~IG~~vA~~l~~~G~~Vi-v~d~~~~~~~~a~~~g~~-~~~l~ell~--~aDiVi~~~~t~~l 325 (479)
T 1v8b_A 259 IVVICGY-GDVGKGCASSMKGLGARVY-ITEIDPICAIQAVMEGFN-VVTLDEIVD--KGDFFITCTGNVDV 325 (479)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCEEE-EECSCHHHHHHHHTTTCE-ECCHHHHTT--TCSEEEECCSSSSS
T ss_pred EEEEEee-CHHHHHHHHHHHhCcCEEE-EEeCChhhHHHHHHcCCE-ecCHHHHHh--cCCEEEECCChhhh
Confidence 4667798 9999999999999999866 677654100 123554 357988876 58999999744443
No 401
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=82.34 E-value=3.3 Score=38.67 Aligned_cols=78 Identities=22% Similarity=0.204 Sum_probs=49.0
Q ss_pred eEEEEeCCCCCcchH-HHHHHHHcCCeEEEeeCCCCCCc-----eecCccccc--CHHHhh-ccCCCcEEEEe--cChhh
Q 019500 43 TRVICQGITGKNGTF-HTEQAIEYGTKMVGGVTPKKGGT-----EHLGLPVFN--TVAEAK-AETKANASAIY--VPPPF 111 (340)
Q Consensus 43 iaViVvGasgk~G~~-v~~~l~~~G~~vv~~VnP~~~g~-----~i~G~p~y~--sl~dip-~~~~vDlavi~--vp~~~ 111 (340)
.+|.++|. |..|-. +++.|.+.|+++. +.|.+.... +-.|++++. +-+++. . ++|++|+. +|++.
T Consensus 5 ~~i~~iGi-Gg~Gms~~A~~L~~~G~~V~-~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~--~~d~vV~Spgi~~~~ 80 (326)
T 3eag_A 5 KHIHIIGI-GGTFMGGLAAIAKEAGFEVS-GCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEF--KADVYVIGNVAKRGM 80 (326)
T ss_dssp CEEEEESC-CSHHHHHHHHHHHHTTCEEE-EEESSCCTTHHHHHHHTTCEEEESCCGGGGGSC--CCSEEEECTTCCTTC
T ss_pred cEEEEEEE-CHHHHHHHHHHHHhCCCEEE-EEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCC--CCCEEEECCCcCCCC
Confidence 45677799 888874 7788889999855 555432101 124777763 445554 3 48998875 34432
Q ss_pred HHHHHHHHHHcCCcE
Q 019500 112 AAAAILEAMEAELDL 126 (340)
Q Consensus 112 v~~~v~ea~~~Gvk~ 126 (340)
+.+++|.++|++.
T Consensus 81 --p~~~~a~~~gi~v 93 (326)
T 3eag_A 81 --DVVEAILNLGLPY 93 (326)
T ss_dssp --HHHHHHHHTTCCE
T ss_pred --HHHHHHHHcCCcE
Confidence 4567777777764
No 402
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=82.17 E-value=2.8 Score=38.95 Aligned_cols=82 Identities=11% Similarity=0.062 Sum_probs=49.1
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCC-eEEEeeCCCCCCceec---------------C--cccccCHHHhhccCCCcEEE
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGT-KMVGGVTPKKGGTEHL---------------G--LPVFNTVAEAKAETKANASA 104 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~-~vv~~VnP~~~g~~i~---------------G--~p~y~sl~dip~~~~vDlav 104 (340)
.+|.|+|+ |.+|...+..+...|. + +..+|.+. +... . +..+.+.+++. +.|++|
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~~~-v~L~Di~~--~~~~g~~~dl~~~~~~~~~~~~i~~t~d~~a~~---~aD~Vi 75 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKELGD-IVLLDIVE--GVPQGKALDLYEASPIEGFDVRVTGTNNYADTA---NSDVIV 75 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSE-EEEECSSS--SHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGT---TCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCe-EEEEeCCc--cHHHHHHHhHHHhHhhcCCCeEEEECCCHHHHC---CCCEEE
Confidence 36788899 9999998888888785 7 44666443 1111 1 11124554443 489999
Q ss_pred EecCh----------------hhHHHHHHHHHHcCCcEEEEec
Q 019500 105 IYVPP----------------PFAAAAILEAMEAELDLVVCIT 131 (340)
Q Consensus 105 i~vp~----------------~~v~~~v~ea~~~Gvk~vvi~t 131 (340)
++++. ....++.+++.+.+.+.++++.
T Consensus 76 ~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~ 118 (309)
T 1ur5_A 76 VTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMV 118 (309)
T ss_dssp ECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEEC
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEc
Confidence 99732 2223455555555666554444
No 403
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=82.16 E-value=0.71 Score=46.37 Aligned_cols=64 Identities=14% Similarity=0.016 Sum_probs=45.8
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCc---eecCcccccCHHHhhccCCCcEEEEecChhh
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT---EHLGLPVFNTVAEAKAETKANASAIYVPPPF 111 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~---~i~G~p~y~sl~dip~~~~vDlavi~vp~~~ 111 (340)
.+|.|+|. |++|+.+++.+..+|.+++ .+||..... .-.|.. +.+++++.. ..|++++++....
T Consensus 278 ktVgIIG~-G~IG~~vA~~l~~~G~~V~-v~d~~~~~~~~a~~~G~~-~~~l~ell~--~aDiVi~~~~t~~ 344 (494)
T 3d64_A 278 KIAVVAGY-GDVGKGCAQSLRGLGATVW-VTEIDPICALQAAMEGYR-VVTMEYAAD--KADIFVTATGNYH 344 (494)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTTCEEE-EECSCHHHHHHHHTTTCE-ECCHHHHTT--TCSEEEECSSSSC
T ss_pred CEEEEEcc-CHHHHHHHHHHHHCCCEEE-EEeCChHhHHHHHHcCCE-eCCHHHHHh--cCCEEEECCCccc
Confidence 35677798 9999999999999999865 667654100 123554 347988876 5899999985443
No 404
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A
Probab=81.84 E-value=1.5 Score=38.06 Aligned_cols=53 Identities=13% Similarity=0.096 Sum_probs=42.2
Q ss_pred HHHHHHhhcCCCccEEEEEEccCCCcHHHHHHHHHHhC-CCCCEEEEEeCCCCC
Q 019500 224 VDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESG-TEKPIVAFIAGLTAP 276 (340)
Q Consensus 224 ~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~~f~~a~r-~~KPVvvlk~Grs~~ 276 (340)
..-|.++..|+..+.|.||+.+.|-....+....++++ .++||+++-.|....
T Consensus 44 ~~~L~~l~~~~~~~~I~l~InSPGG~v~a~~~I~~~i~~~~~pV~~~v~g~AaS 97 (193)
T 1yg6_A 44 VAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAAS 97 (193)
T ss_dssp HHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHHHSSSCEEEEEEEEEET
T ss_pred HHHHHHHHhcCCCCCEEEEEECcCCCHHHHHHHHHHHHhcCCCEEEEEeeeHHH
Confidence 34555677777889999999998877888888888876 679999999776543
No 405
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=81.78 E-value=4.7 Score=37.76 Aligned_cols=88 Identities=10% Similarity=0.009 Sum_probs=53.6
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcCC-------eEEEeeCCC----C---CC----------ceecCcccccCHHHhhc
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYGT-------KMVGGVTPK----K---GG----------TEHLGLPVFNTVAEAKA 96 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G~-------~vv~~VnP~----~---~g----------~~i~G~p~y~sl~dip~ 96 (340)
++.+|+|+|++|..|+..+..|...|. +++ .++.. . .| .-...+....++.+...
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~-l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~ 82 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQ-LLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFK 82 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEE-EECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEE-EEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhC
Confidence 357899999999999998888877664 444 56544 1 00 00111222345555544
Q ss_pred cCCCcEEEEecCh----------------hhHHHHHHHHHHcC-CcE-EEEec
Q 019500 97 ETKANASAIYVPP----------------PFAAAAILEAMEAE-LDL-VVCIT 131 (340)
Q Consensus 97 ~~~vDlavi~vp~----------------~~v~~~v~ea~~~G-vk~-vvi~t 131 (340)
+.|+++++... ..+.++++++.+.+ .++ ++++|
T Consensus 83 --~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~S 133 (329)
T 1b8p_A 83 --DADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVG 133 (329)
T ss_dssp --TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred --CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc
Confidence 58999986531 22556788888885 774 44444
No 406
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=81.76 E-value=4.1 Score=36.93 Aligned_cols=104 Identities=17% Similarity=0.126 Sum_probs=49.3
Q ss_pred cccccccCCCCCCCCCCCCcccccCcCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHh
Q 019500 15 MSSEICCGQSRSFTTAPPPAPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEA 94 (340)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~l~~lf~p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~di 94 (340)
-+|+-|-.+.+.|-+. +.. -+.-.++|.|+++.+|+.+++.|.+.|++++ .++.+. +... ...+++
T Consensus 7 ~~~~~~~~~~~~~~~~---m~~---~~~k~~lVTGas~GIG~aia~~la~~G~~V~-~~~r~~--~~~~-----~~~~~l 72 (283)
T 3v8b_A 7 HSSGVDLGTENLYFQS---MMN---QPSPVALITGAGSGIGRATALALAADGVTVG-ALGRTR--TEVE-----EVADEI 72 (283)
T ss_dssp --------------------------CCCEEEEESCSSHHHHHHHHHHHHTTCEEE-EEESSH--HHHH-----HHHHHH
T ss_pred Cccccccccchhhhhh---hcC---CCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEeCCH--HHHH-----HHHHHH
Confidence 4567777777777655 222 2233467889999999999999999999866 444332 1110 112222
Q ss_pred hccCCCcEE---EEecChhhHHHHHHHHHHc--CCcEEEEecCCC
Q 019500 95 KAETKANAS---AIYVPPPFAAAAILEAMEA--ELDLVVCITEGI 134 (340)
Q Consensus 95 p~~~~vDla---vi~vp~~~v~~~v~ea~~~--Gvk~vvi~t~Gf 134 (340)
.+. ..++. .+.+.++.+.++++++.+. ++..+| ...|+
T Consensus 73 ~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lV-nnAg~ 115 (283)
T 3v8b_A 73 VGA-GGQAIALEADVSDELQMRNAVRDLVLKFGHLDIVV-ANAGI 115 (283)
T ss_dssp TTT-TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE-ECCCC
T ss_pred Hhc-CCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEE-ECCCC
Confidence 221 12222 2345566777777777665 577654 45554
No 407
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=81.67 E-value=6.9 Score=38.75 Aligned_cols=78 Identities=18% Similarity=0.230 Sum_probs=48.6
Q ss_pred CCeEEEEeCCCCCcchH-HHHHHHHcCCeEEEeeCCCCCC--c--eecCccccc--CHHHhhccCCCcEEEEe--cChhh
Q 019500 41 KNTRVICQGITGKNGTF-HTEQAIEYGTKMVGGVTPKKGG--T--EHLGLPVFN--TVAEAKAETKANASAIY--VPPPF 111 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~-v~~~l~~~G~~vv~~VnP~~~g--~--~i~G~p~y~--sl~dip~~~~vDlavi~--vp~~~ 111 (340)
+..+|.|+|. |..|.. +++.|.+.|+++. +.|.+... + +-.|++++. +-+.+. ++|++|+. +|++.
T Consensus 21 ~~~~v~viGi-G~sG~s~~A~~l~~~G~~V~-~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~---~~d~vV~Spgi~~~~ 95 (494)
T 4hv4_A 21 RVRHIHFVGI-GGAGMGGIAEVLANEGYQIS-GSDLAPNSVTQHLTALGAQIYFHHRPENVL---DASVVVVSTAISADN 95 (494)
T ss_dssp -CCEEEEETT-TSTTHHHHHHHHHHTTCEEE-EECSSCCHHHHHHHHTTCEEESSCCGGGGT---TCSEEEECTTSCTTC
T ss_pred cCCEEEEEEE-cHhhHHHHHHHHHhCCCeEE-EEECCCCHHHHHHHHCCCEEECCCCHHHcC---CCCEEEECCCCCCCC
Confidence 3456778899 888874 6889999999866 66654310 0 124777664 333333 48998875 34432
Q ss_pred HHHHHHHHHHcCCc
Q 019500 112 AAAAILEAMEAELD 125 (340)
Q Consensus 112 v~~~v~ea~~~Gvk 125 (340)
+.+.+|.++|++
T Consensus 96 --p~~~~a~~~gi~ 107 (494)
T 4hv4_A 96 --PEIVAAREARIP 107 (494)
T ss_dssp --HHHHHHHHTTCC
T ss_pred --HHHHHHHHCCCC
Confidence 356667777765
No 408
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=81.66 E-value=4 Score=40.42 Aligned_cols=128 Identities=13% Similarity=0.170 Sum_probs=76.5
Q ss_pred cCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEe-------eCCCCCCceecCcccc--------cCHH------------
Q 019500 40 DKNTRVICQGITGKNGTFHTEQAIEYGTKMVGG-------VTPKKGGTEHLGLPVF--------NTVA------------ 92 (340)
Q Consensus 40 p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~-------VnP~~~g~~i~G~p~y--------~sl~------------ 92 (340)
.+..+|+|+|. |+.|...++.|.+.|.++++. +||+.. ++.-+.-+ ..+.
T Consensus 233 l~Gk~vaVQG~-GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~Gi--d~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~~ 309 (450)
T 4fcc_A 233 FEGMRVSVSGS-GNVAQYAIEKAMEFGARVITASDSSGTVVDESGF--TKEKLARLIEIKSSRDGRVADYAKEFGLVYLE 309 (450)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCC--CHHHHHHHHHHHTSTTCCHHHHHHHHTCEEEE
T ss_pred cCCCEEEEeCC-ChHHHHHHHHHHhcCCeEEEEecCCceEEeCCCC--CHHHHHHHHHHhcccCCccccccccCCcEEec
Confidence 34667999998 999999999999999997753 455431 11100000 0111
Q ss_pred --HhhccCCCcEEEEec-ChhhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEEccCCCCcccCCCcc
Q 019500 93 --EAKAETKANASAIYV-PPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPGECK 169 (340)
Q Consensus 93 --dip~~~~vDlavi~v-p~~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girviGPNc~Gi~~p~~~~ 169 (340)
++-+ .++|+++=|- ......+.++...+.|++.++-.+-+....+..++ + ++.||.++ |.
T Consensus 310 ~~~i~~-~~~DI~iPcAl~~~I~~~~a~~L~a~g~k~IaEgAN~p~t~eA~~i---L-~~rGIl~~-PD----------- 372 (450)
T 4fcc_A 310 GQQPWS-VPVDIALPCATQNELDVDAAHQLIANGVKAVAEGANMPTTIEATEL---F-QQAGVLFA-PG----------- 372 (450)
T ss_dssp TCCGGG-SCCSEEEECSCTTCBCHHHHHHHHHTTCCEEECCSSSCBCHHHHHH---H-HHTTCEEE-CH-----------
T ss_pred Cccccc-CCccEEeeccccccccHHHHHHHHhcCceEEecCCCCCCCHHHHHH---H-HHCCCEEE-Ch-----------
Confidence 2222 2588888764 44555778888888899986543344433333332 2 45666554 43
Q ss_pred cccCCCCCCCCCcEEEEecChHHHHHHHHHHHh
Q 019500 170 IGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTA 202 (340)
Q Consensus 170 ~~~~~~~~~~~G~valvSQSG~l~~~~~~~~~~ 202 (340)
++.-+|+++..-++|.+.
T Consensus 373 ---------------~~aNAGGVi~S~~E~~qn 390 (450)
T 4fcc_A 373 ---------------KAANAGGVATSGLEMAQN 390 (450)
T ss_dssp ---------------HHHTTHHHHHHHHHHHHH
T ss_pred ---------------HHhcCccHhhhHHHHhhh
Confidence 233467777777777654
No 409
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=81.64 E-value=1.6 Score=40.45 Aligned_cols=39 Identities=23% Similarity=0.289 Sum_probs=30.8
Q ss_pred ccCcCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCC
Q 019500 37 VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK 77 (340)
Q Consensus 37 lf~p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~ 77 (340)
++.-+..+|+|+|. |+.|..-++.|.+.|.+++ .|+|+.
T Consensus 8 ~~~l~~k~VLVVGg-G~va~rka~~Ll~~Ga~Vt-Viap~~ 46 (274)
T 1kyq_A 8 AHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLT-LVSPDL 46 (274)
T ss_dssp EECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEE-EEEEEE
T ss_pred EEEcCCCEEEEECC-cHHHHHHHHHHHhCCCEEE-EEcCCC
Confidence 34556678899999 8999999999999999855 677654
No 410
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=81.61 E-value=7.6 Score=36.20 Aligned_cols=86 Identities=17% Similarity=0.153 Sum_probs=47.5
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCC--eEE-EeeCCCCCCc---ee-cCcc------cc-cCHHHhhccCCCcEEEEec
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGT--KMV-GGVTPKKGGT---EH-LGLP------VF-NTVAEAKAETKANASAIYV 107 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~--~vv-~~VnP~~~g~---~i-~G~p------~y-~sl~dip~~~~vDlavi~v 107 (340)
+.+|+|+|+ |..|...+-.+...+. +++ +.+|+..... ++ .+.+ +. .+.+++. +.|++|++.
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~---~aDvVii~~ 82 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVK---DCDVIVVTA 82 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGT---TCSEEEECC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhC---CCCEEEEcC
Confidence 457788899 9999888777777665 533 2344432110 01 1111 22 1233332 589999988
Q ss_pred Chhh----------------HHHHHHHHHHcCCcEEEEec
Q 019500 108 PPPF----------------AAAAILEAMEAELDLVVCIT 131 (340)
Q Consensus 108 p~~~----------------v~~~v~ea~~~Gvk~vvi~t 131 (340)
+... +.++++++.+.+-++.++..
T Consensus 83 g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~ 122 (318)
T 1y6j_A 83 GANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV 122 (318)
T ss_dssp CC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred CCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEe
Confidence 6543 46677777776655544443
No 411
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=80.79 E-value=8.6 Score=33.87 Aligned_cols=30 Identities=10% Similarity=0.068 Sum_probs=25.4
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeC
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVT 74 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~Vn 74 (340)
.|+|.|+++.+|+.+++.|.+.|++++ .++
T Consensus 21 ~vlVTGas~gIG~~~a~~l~~~G~~V~-~~~ 50 (249)
T 1o5i_A 21 GVLVLAASRGIGRAVADVLSQEGAEVT-ICA 50 (249)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEE-EEc
Confidence 467889999999999999999999866 443
No 412
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=80.69 E-value=3.4 Score=40.67 Aligned_cols=82 Identities=7% Similarity=-0.072 Sum_probs=55.7
Q ss_pred CcCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCcee------cCccccc---CHHHhhccCCCcEEEEecCh
Q 019500 39 VDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH------LGLPVFN---TVAEAKAETKANASAIYVPP 109 (340)
Q Consensus 39 ~p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i------~G~p~y~---sl~dip~~~~vDlavi~vp~ 109 (340)
.-+..+|+|+|. |+.|..-++.|.+.|.++. .++|+.. .++ .++.... +-+++. +.|+++.++..
T Consensus 9 ~l~~~~vlVvGg-G~va~~k~~~L~~~ga~V~-vi~~~~~-~~~~~l~~~~~i~~~~~~~~~~~l~---~~~lVi~at~~ 82 (457)
T 1pjq_A 9 QLRDRDCLIVGG-GDVAERKARLLLEAGARLT-VNALTFI-PQFTVWANEGMLTLVEGPFDETLLD---SCWLAIAATDD 82 (457)
T ss_dssp CCBTCEEEEECC-SHHHHHHHHHHHHTTBEEE-EEESSCC-HHHHHHHTTTSCEEEESSCCGGGGT---TCSEEEECCSC
T ss_pred ECCCCEEEEECC-CHHHHHHHHHHHhCcCEEE-EEcCCCC-HHHHHHHhcCCEEEEECCCCccccC---CccEEEEcCCC
Confidence 345567889999 8999999999999998755 7787642 221 1233221 123443 47999988766
Q ss_pred h-hHHHHHHHHHHcCCcE
Q 019500 110 P-FAAAAILEAMEAELDL 126 (340)
Q Consensus 110 ~-~v~~~v~ea~~~Gvk~ 126 (340)
. .-..+.++|-++|+..
T Consensus 83 ~~~n~~i~~~a~~~~i~v 100 (457)
T 1pjq_A 83 DTVNQRVSDAAESRRIFC 100 (457)
T ss_dssp HHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHcCCEE
Confidence 5 4567888888888863
No 413
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=80.67 E-value=1.4 Score=42.22 Aligned_cols=31 Identities=19% Similarity=0.284 Sum_probs=26.2
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEee
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGV 73 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~V 73 (340)
.+|+|.|++|.+|+.+++.|.+.|++++..+
T Consensus 70 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~ 100 (427)
T 4f6c_A 70 GNTLLTGATGFLGAYLIEALQGYSHRIYCFI 100 (427)
T ss_dssp EEEEEECTTSHHHHHHHHHHTTTEEEEEEEE
T ss_pred CEEEEecCCcHHHHHHHHHHHcCCCEEEEEE
Confidence 4688999999999999999988888876443
No 414
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=80.19 E-value=4.9 Score=35.85 Aligned_cols=82 Identities=21% Similarity=0.091 Sum_probs=48.4
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEE---EecChhhHHHHHHHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASA---IYVPPPFAAAAILEAM 120 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlav---i~vp~~~v~~~v~ea~ 120 (340)
.|+|.|+++.+|+.+++.|.+.|++++.....+. +... .. .+++.+. ..++.. +.+..+.+.++++++.
T Consensus 28 ~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~--~~~~--~~---~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~ 99 (272)
T 4e3z_A 28 VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANR--EAAD--AV---VAAITES-GGEAVAIPGDVGNAADIAAMFSAVD 99 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH--HHHH--HH---HHHHHHT-TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCh--hHHH--HH---HHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 4788999999999999999999999753334332 1111 11 1122111 122222 2445666777777776
Q ss_pred Hc--CCcEEEEecCCC
Q 019500 121 EA--ELDLVVCITEGI 134 (340)
Q Consensus 121 ~~--Gvk~vvi~t~Gf 134 (340)
+. ++..+| ...|+
T Consensus 100 ~~~g~id~li-~nAg~ 114 (272)
T 4e3z_A 100 RQFGRLDGLV-NNAGI 114 (272)
T ss_dssp HHHSCCCEEE-ECCCC
T ss_pred HhCCCCCEEE-ECCCC
Confidence 65 577654 55554
No 415
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=80.17 E-value=3.4 Score=40.37 Aligned_cols=79 Identities=15% Similarity=0.145 Sum_probs=48.7
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCC--Cc-----eecCccccc--CHHHhhccCCCcEEEEe--cChhh
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKG--GT-----EHLGLPVFN--TVAEAKAETKANASAIY--VPPPF 111 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~--g~-----~i~G~p~y~--sl~dip~~~~vDlavi~--vp~~~ 111 (340)
.+|.|+|. |..|...++.|.+.|+++. +.|.+.. .. +-.|++++- +-+++.+. .+|++|+. +|++.
T Consensus 10 k~v~viG~-G~sG~s~A~~l~~~G~~V~-~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~-~~d~vv~spgi~~~~ 86 (451)
T 3lk7_A 10 KKVLVLGL-ARSGEAAARLLAKLGAIVT-VNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDE-DFCYMIKNPGIPYNN 86 (451)
T ss_dssp CEEEEECC-TTTHHHHHHHHHHTTCEEE-EEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGS-CEEEEEECTTSCTTS
T ss_pred CEEEEEee-CHHHHHHHHHHHhCCCEEE-EEeCCcccCChHHHHHHhCCCEEEECCChHHhhcC-CCCEEEECCcCCCCC
Confidence 35667799 8888888999999999865 5544320 00 124777663 22233331 27988875 34433
Q ss_pred HHHHHHHHHHcCCcE
Q 019500 112 AAAAILEAMEAELDL 126 (340)
Q Consensus 112 v~~~v~ea~~~Gvk~ 126 (340)
+.+.++.++|++.
T Consensus 87 --p~~~~a~~~gi~v 99 (451)
T 3lk7_A 87 --PMVKKALEKQIPV 99 (451)
T ss_dssp --HHHHHHHHTTCCE
T ss_pred --hhHHHHHHCCCcE
Confidence 3477788888764
No 416
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=79.95 E-value=0.97 Score=41.81 Aligned_cols=69 Identities=6% Similarity=0.032 Sum_probs=42.3
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee-cCcc--cccCHHHhhccCCCcEEEEecChhhHH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH-LGLP--VFNTVAEAKAETKANASAIYVPPPFAA 113 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i-~G~p--~y~sl~dip~~~~vDlavi~vp~~~v~ 113 (340)
..+++|+|+ |.+|+.++..|.+.|++.+..+|++... +++ ..+. .|.++.+... +.|++|-+||....+
T Consensus 117 ~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~--~aDiVInaTp~Gm~~ 189 (277)
T 3don_A 117 DAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLD--EFDIIINTTPAGMNG 189 (277)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGG--GCSEEEECCC-----
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhc--CCCEEEECccCCCCC
Confidence 345677898 8899999999999998534478876421 111 1222 2445555444 489999999876543
No 417
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=79.92 E-value=4 Score=38.22 Aligned_cols=82 Identities=10% Similarity=0.016 Sum_probs=49.4
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCC-eEEEeeCCCCCCc-----ee------c--C--cccccCHHHhhccCCCcEEEEe
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGT-KMVGGVTPKKGGT-----EH------L--G--LPVFNTVAEAKAETKANASAIY 106 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~-~vv~~VnP~~~g~-----~i------~--G--~p~y~sl~dip~~~~vDlavi~ 106 (340)
.+|.|+|+ |.+|..++..+...|+ + +..+|.+...- ++ . . +....+++++. +.|++|++
T Consensus 5 ~kI~VIGa-G~vG~~ia~~la~~g~~~-v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~~al~---~aD~Vi~a 79 (322)
T 1t2d_A 5 AKIVLVGS-GMIGGVMATLIVQKNLGD-VVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLA---GADVVIVT 79 (322)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCE-EEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGT---TCSEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCHHHhC---CCCEEEEe
Confidence 47888899 9999998888888887 7 44555443100 01 0 1 12224564443 48999999
Q ss_pred c--Chh-------------------hHHHHHHHHHHcCCcEEEE
Q 019500 107 V--PPP-------------------FAAAAILEAMEAELDLVVC 129 (340)
Q Consensus 107 v--p~~-------------------~v~~~v~ea~~~Gvk~vvi 129 (340)
+ |.. ...++++++.+..-+++++
T Consensus 80 ~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~ii 123 (322)
T 1t2d_A 80 AGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFII 123 (322)
T ss_dssp CSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred CCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 8 421 3555666666666555443
No 418
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=79.53 E-value=11 Score=33.25 Aligned_cols=84 Identities=17% Similarity=0.155 Sum_probs=49.8
Q ss_pred CeEEEEeCCCC-CcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEE---EEecChhhHHHHHH
Q 019500 42 NTRVICQGITG-KNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANAS---AIYVPPPFAAAAIL 117 (340)
Q Consensus 42 ~iaViVvGasg-k~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDla---vi~vp~~~v~~~v~ 117 (340)
.-.++|.|++| .+|+.+++.|.+.|++++ .++.+. +... ...+++.+....++. .+.+.++.+.++++
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~-~~~r~~--~~~~-----~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~ 93 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVV-ISDYHE--RRLG-----ETRDQLADLGLGRVEAVVCDVTSTEAVDALIT 93 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEE-EEESCH--HHHH-----HHHHHHHTTCSSCEEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEE-EecCCH--HHHH-----HHHHHHHhcCCCceEEEEeCCCCHHHHHHHHH
Confidence 34578889987 599999999999999966 444332 1110 112222211112222 23456677777777
Q ss_pred HHHHc--CCcEEEEecCCC
Q 019500 118 EAMEA--ELDLVVCITEGI 134 (340)
Q Consensus 118 ea~~~--Gvk~vvi~t~Gf 134 (340)
++.+. .+..+| ...|+
T Consensus 94 ~~~~~~g~id~li-~~Ag~ 111 (266)
T 3o38_A 94 QTVEKAGRLDVLV-NNAGL 111 (266)
T ss_dssp HHHHHHSCCCEEE-ECCCC
T ss_pred HHHHHhCCCcEEE-ECCCc
Confidence 77766 577654 56664
No 419
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=79.36 E-value=5.3 Score=37.96 Aligned_cols=35 Identities=17% Similarity=0.184 Sum_probs=28.1
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCC
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK 77 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~ 77 (340)
..+|+|+|+ |..|..++++|...|..-+..||+..
T Consensus 118 ~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 556888899 88999999999999986555777653
No 420
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=78.97 E-value=6.1 Score=36.71 Aligned_cols=85 Identities=12% Similarity=0.116 Sum_probs=50.1
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCC--eEE-EeeCCCCCCce-----e--cCcccccCHHHhhccCCCcEEEEecC----
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGT--KMV-GGVTPKKGGTE-----H--LGLPVFNTVAEAKAETKANASAIYVP---- 108 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~--~vv-~~VnP~~~g~~-----i--~G~p~y~sl~dip~~~~vDlavi~vp---- 108 (340)
.+|.|+|+ |.+|...+..+...|+ +++ +.+|+...|.. . ..+..+.+++++. +.|++|++..
T Consensus 15 ~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t~d~~~l~---~aD~Vi~aag~~~p 90 (303)
T 2i6t_A 15 NKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDLSASA---HSKVVIFTVNSLGS 90 (303)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEESCGGGGT---TCSEEEECCCC---
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEeCCHHHHC---CCCEEEEcCCCCCC
Confidence 46788898 9999888887777776 533 23444321110 0 1233445665554 4899999862
Q ss_pred -----------hhhHHHHHHHHHHcCCcEEEEec
Q 019500 109 -----------PPFAAAAILEAMEAELDLVVCIT 131 (340)
Q Consensus 109 -----------~~~v~~~v~ea~~~Gvk~vvi~t 131 (340)
.+...++++++.+..-++++++.
T Consensus 91 G~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~ 124 (303)
T 2i6t_A 91 SQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVA 124 (303)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEc
Confidence 23356677777777666654333
No 421
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=78.94 E-value=2.3 Score=39.90 Aligned_cols=67 Identities=18% Similarity=0.209 Sum_probs=48.3
Q ss_pred CcCCeEEEEeCCCCCcchHHHHHHHH-cCCeEEEeeCCCCCCcee-------cCcc--cccCHHHhhccCCCcEEEEecC
Q 019500 39 VDKNTRVICQGITGKNGTFHTEQAIE-YGTKMVGGVTPKKGGTEH-------LGLP--VFNTVAEAKAETKANASAIYVP 108 (340)
Q Consensus 39 ~p~~iaViVvGasgk~G~~v~~~l~~-~G~~vv~~VnP~~~g~~i-------~G~p--~y~sl~dip~~~~vDlavi~vp 108 (340)
.+...++.|+|+ |.+|+.+++.+.+ .+.+.+...|++. .++. .|++ .+ ++++... +.|+++.+||
T Consensus 118 ~~~~~~v~iIGa-G~~a~~~~~al~~~~~~~~V~v~~r~~-a~~la~~l~~~~g~~~~~~-~~~eav~--~aDIVi~aT~ 192 (313)
T 3hdj_A 118 RPRSSVLGLFGA-GTQGAEHAAQLSARFALEAILVHDPYA-SPEILERIGRRCGVPARMA-APADIAA--QADIVVTATR 192 (313)
T ss_dssp CTTCCEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECTTC-CHHHHHHHHHHHTSCEEEC-CHHHHHH--HCSEEEECCC
T ss_pred cCCCcEEEEECc-cHHHHHHHHHHHHhCCCcEEEEECCcH-HHHHHHHHHHhcCCeEEEe-CHHHHHh--hCCEEEEccC
Confidence 445667888898 9999999998887 4666566788772 2221 2553 34 8888876 4899999998
Q ss_pred hh
Q 019500 109 PP 110 (340)
Q Consensus 109 ~~ 110 (340)
..
T Consensus 193 s~ 194 (313)
T 3hdj_A 193 ST 194 (313)
T ss_dssp CS
T ss_pred CC
Confidence 75
No 422
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=78.63 E-value=2.6 Score=36.88 Aligned_cols=80 Identities=11% Similarity=0.083 Sum_probs=50.1
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCcee----cCccccc-C---HHHhhcc--CCCcEEEEecChhhH-
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH----LGLPVFN-T---VAEAKAE--TKANASAIYVPPPFA- 112 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i----~G~p~y~-s---l~dip~~--~~vDlavi~vp~~~v- 112 (340)
.|+|+|+ |+.|+.+++.|.+.|+ ++ .++++. +.+ .|++++. + .+.+.+. .+.|++++++|.+..
T Consensus 11 ~viI~G~-G~~G~~la~~L~~~g~-v~-vid~~~--~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n 85 (234)
T 2aef_A 11 HVVICGW-SESTLECLRELRGSEV-FV-LAEDEN--VRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSET 85 (234)
T ss_dssp EEEEESC-CHHHHHHHHHSTTSEE-EE-EESCGG--GHHHHHHTTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHHH
T ss_pred EEEEECC-ChHHHHHHHHHHhCCe-EE-EEECCH--HHHHHHhcCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHHH
Confidence 5778899 9999999999988887 55 777654 211 3444332 2 2222111 258999999988644
Q ss_pred HHHHHHHHHcCCc-EEE
Q 019500 113 AAAILEAMEAELD-LVV 128 (340)
Q Consensus 113 ~~~v~ea~~~Gvk-~vv 128 (340)
..+...|-+.+.+ .++
T Consensus 86 ~~~~~~a~~~~~~~~ii 102 (234)
T 2aef_A 86 IHCILGIRKIDESVRII 102 (234)
T ss_dssp HHHHHHHHHHCSSSEEE
T ss_pred HHHHHHHHHHCCCCeEE
Confidence 3344555566765 444
No 423
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=78.21 E-value=0.95 Score=44.75 Aligned_cols=96 Identities=15% Similarity=0.080 Sum_probs=58.0
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCc---eecCcccccCHHHhhccCCCcEEEEecChhhHHHHHHH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT---EHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILE 118 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~---~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e 118 (340)
..+|+|+|. |++|+.+++.++.+|.+++ .++|..... .-.|.. +.+++++.. ..|+++.+.....+.+ ++
T Consensus 211 GktVgIiG~-G~IG~~vA~~Lka~Ga~Vi-v~D~~p~~a~~A~~~G~~-~~sL~eal~--~ADVVilt~gt~~iI~--~e 283 (436)
T 3h9u_A 211 GKTACVCGY-GDVGKGCAAALRGFGARVV-VTEVDPINALQAAMEGYQ-VLLVEDVVE--EAHIFVTTTGNDDIIT--SE 283 (436)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHHTTCE-ECCHHHHTT--TCSEEEECSSCSCSBC--TT
T ss_pred CCEEEEEee-CHHHHHHHHHHHHCCCEEE-EECCChhhhHHHHHhCCe-ecCHHHHHh--hCCEEEECCCCcCccC--HH
Confidence 345778898 9999999999999999865 566643101 124544 348999887 5899998765544322 11
Q ss_pred HH-HcCCcEEEEecC-CCChhhHHHHHH
Q 019500 119 AM-EAELDLVVCITE-GIPQHDMVRVKA 144 (340)
Q Consensus 119 a~-~~Gvk~vvi~t~-Gf~e~~~~~l~~ 144 (340)
.. ...-..+++-.+ |-.|-+...+.+
T Consensus 284 ~l~~MK~gAIVINvgRg~vEID~~~L~~ 311 (436)
T 3h9u_A 284 HFPRMRDDAIVCNIGHFDTEIQVAWLKA 311 (436)
T ss_dssp TGGGCCTTEEEEECSSSGGGBCHHHHHH
T ss_pred HHhhcCCCcEEEEeCCCCCccCHHHHHh
Confidence 22 123334443333 333456666654
No 424
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=78.17 E-value=2.1 Score=41.24 Aligned_cols=87 Identities=15% Similarity=0.008 Sum_probs=56.1
Q ss_pred CeEEEEeCCCCCcchHHHHHHH----Hc-CCeEEEeeCCCC--------------------------------CCce--e
Q 019500 42 NTRVICQGITGKNGTFHTEQAI----EY-GTKMVGGVTPKK--------------------------------GGTE--H 82 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~----~~-G~~vv~~VnP~~--------------------------------~g~~--i 82 (340)
.++|.|.|. |++|+.+.|.|. +. .+++++.-+|-. .++. +
T Consensus 2 ~~kv~INGF-GrIGr~v~Ra~~~~~~~~~~~~vvaINd~~~d~~~~a~llkyDS~hG~f~~~v~~~~~~~~~~~~~~l~i 80 (359)
T 3ids_C 2 PIKVGINGF-GRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDDTLVV 80 (359)
T ss_dssp CEEEEEECT-THHHHHHHHHHHHTTCBTTTEEEEEEECSSCCHHHHHHHHHEETTTEECSSCEEEECSCTTSSSCCEEEE
T ss_pred ceEEEEECC-ChHHHHHHHHhHHHHhcCCCcEEEEEecCCCCHHHHHHHhcccCCCCCEeeEEEecccccccCCCCEEEE
Confidence 468888898 999999988843 22 356775444411 0011 2
Q ss_pred cC--ccccc---CHHHhhc-cCCCcEEEEecChhhHHHHHHHHHHcCCcEEEE
Q 019500 83 LG--LPVFN---TVAEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVC 129 (340)
Q Consensus 83 ~G--~p~y~---sl~dip~-~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi 129 (340)
.| ++++. +.+++|- +..+|+++-++......+-+...++.|.|.++|
T Consensus 81 nGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViI 133 (359)
T 3ids_C 81 NGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVI 133 (359)
T ss_dssp TTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEE
T ss_pred CCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCCCEEEE
Confidence 23 34453 4555541 125899999888877788888888889888664
No 425
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=77.72 E-value=4 Score=36.89 Aligned_cols=83 Identities=17% Similarity=0.119 Sum_probs=48.6
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEE---EEecChhhHHHHHHHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANAS---AIYVPPPFAAAAILEAM 120 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDla---vi~vp~~~v~~~v~ea~ 120 (340)
.++|.|+++.+|+.+++.|.+.|++++ .++.+.. +... .. .+++.+.....+. .+.+.++.+.++++++.
T Consensus 27 ~~lVTGas~GIG~~ia~~la~~G~~V~-~~~r~~~-~~~~--~~---~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 99 (281)
T 3v2h_A 27 TAVITGSTSGIGLAIARTLAKAGANIV-LNGFGAP-DEIR--TV---TDEVAGLSSGTVLHHPADMTKPSEIADMMAMVA 99 (281)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEE-EECCCCH-HHHH--HH---HHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeCCCh-HHHH--HH---HHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence 467889999999999999999999866 4543220 1110 01 1122111012222 23455677777777777
Q ss_pred Hc--CCcEEEEecCCC
Q 019500 121 EA--ELDLVVCITEGI 134 (340)
Q Consensus 121 ~~--Gvk~vvi~t~Gf 134 (340)
+. ++..+| -..|.
T Consensus 100 ~~~g~iD~lv-~nAg~ 114 (281)
T 3v2h_A 100 DRFGGADILV-NNAGV 114 (281)
T ss_dssp HHTSSCSEEE-ECCCC
T ss_pred HHCCCCCEEE-ECCCC
Confidence 66 577654 55554
No 426
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=77.69 E-value=6.7 Score=39.98 Aligned_cols=88 Identities=14% Similarity=0.082 Sum_probs=52.8
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCCCcee---cCcccc-cC-------HHHhhccCCCcEEEEecCh
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEH---LGLPVF-NT-------VAEAKAETKANASAIYVPP 109 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~g~~i---~G~p~y-~s-------l~dip~~~~vDlavi~vp~ 109 (340)
..+|+|.|++|.+|+.+++.|.+. |++++........-... .++..+ .+ ++++.+ ++|+++-+...
T Consensus 315 ~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--~~D~Vih~Aa~ 392 (660)
T 1z7e_A 315 RTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK--KCDVVLPLVAI 392 (660)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHH--HCSEEEECCCC
T ss_pred CceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhc--CCCEEEECcee
Confidence 457889999999999999999987 88876443322100111 122221 12 333433 48988874311
Q ss_pred ------------------hhHHHHHHHHHHcCCcEEEEecC
Q 019500 110 ------------------PFAAAAILEAMEAELDLVVCITE 132 (340)
Q Consensus 110 ------------------~~v~~~v~ea~~~Gvk~vvi~t~ 132 (340)
.....+++.|.+.| +.+|.+++
T Consensus 393 ~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS 432 (660)
T 1z7e_A 393 ATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPST 432 (660)
T ss_dssp CCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECC
T ss_pred cCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEec
Confidence 12345677777888 66666665
No 427
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=77.64 E-value=4.1 Score=41.78 Aligned_cols=34 Identities=26% Similarity=0.447 Sum_probs=28.0
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCC
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPK 76 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~ 76 (340)
..+|+|+|+ |..|..++++|...|..-+..||+.
T Consensus 327 ~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D 360 (598)
T 3vh1_A 327 NTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG 360 (598)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 457888999 8899999999999998755577654
No 428
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=77.55 E-value=3.3 Score=39.16 Aligned_cols=41 Identities=20% Similarity=0.184 Sum_probs=27.2
Q ss_pred ccccCcCCeEEEEeCCCCCcchHHHHHHHHcCC-eEEEeeCCC
Q 019500 35 PAVFVDKNTRVICQGITGKNGTFHTEQAIEYGT-KMVGGVTPK 76 (340)
Q Consensus 35 ~~lf~p~~iaViVvGasgk~G~~v~~~l~~~G~-~vv~~VnP~ 76 (340)
.++|+.+..+|.|+|+ |.+|..++..+...|. ..+..+|..
T Consensus 2 ~~~~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 2 ASITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp -----CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred cccccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 3577777788999998 9999999888887776 223366653
No 429
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=77.53 E-value=9.5 Score=33.80 Aligned_cols=27 Identities=19% Similarity=0.177 Sum_probs=24.3
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEE
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMV 70 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv 70 (340)
.++|.|+++.+|+.+++.|.+.|++++
T Consensus 23 ~vlVTGas~gIG~aia~~l~~~G~~V~ 49 (253)
T 2nm0_A 23 SVLVTGGNRGIGLAIARAFADAGDKVA 49 (253)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEE
Confidence 467889999999999999999999866
No 430
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=76.74 E-value=3 Score=37.34 Aligned_cols=94 Identities=20% Similarity=0.161 Sum_probs=53.3
Q ss_pred cccccCcCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCc-EEEEecChhhH
Q 019500 34 APAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKAN-ASAIYVPPPFA 112 (340)
Q Consensus 34 l~~lf~p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vD-lavi~vp~~~v 112 (340)
...++.-+.-.++|.|+++.+|+.+++.|.+.|++++ .++.+. +... .....+.+.... ++. +..+.+.++.+
T Consensus 12 ~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~r~~--~~~~--~~~~~l~~~~~~-~~~~~~~Dv~~~~~v 85 (266)
T 4egf_A 12 YAGVLRLDGKRALITGATKGIGADIARAFAAAGARLV-LSGRDV--SELD--AARRALGEQFGT-DVHTVAIDLAEPDAP 85 (266)
T ss_dssp BCGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEE-EEESCH--HHHH--HHHHHHHHHHCC-CEEEEECCTTSTTHH
T ss_pred cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeCCH--HHHH--HHHHHHHHhcCC-cEEEEEecCCCHHHH
Confidence 4445544444678899999999999999999999966 444332 1111 111112221110 121 12234556677
Q ss_pred HHHHHHHHHc--CCcEEEEecCCC
Q 019500 113 AAAILEAMEA--ELDLVVCITEGI 134 (340)
Q Consensus 113 ~~~v~ea~~~--Gvk~vvi~t~Gf 134 (340)
.++++++.+. ++..+| ...|.
T Consensus 86 ~~~~~~~~~~~g~id~lv-~nAg~ 108 (266)
T 4egf_A 86 AELARRAAEAFGGLDVLV-NNAGI 108 (266)
T ss_dssp HHHHHHHHHHHTSCSEEE-EECCC
T ss_pred HHHHHHHHHHcCCCCEEE-ECCCc
Confidence 7777777665 577655 45553
No 431
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=76.62 E-value=7.1 Score=34.97 Aligned_cols=78 Identities=17% Similarity=0.227 Sum_probs=49.5
Q ss_pred cCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChhhHHHHHHHH
Q 019500 40 DKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEA 119 (340)
Q Consensus 40 p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ea 119 (340)
.+.-.|+|.|+++.+|+.+++.|.+.|++++ .++.+. +...+ .. .-+..+.+..+.+.++++++
T Consensus 12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~-~~~r~~--~~~~~---------~~----~~~~~Dv~~~~~v~~~~~~~ 75 (269)
T 3vtz_A 12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVV-SVSLDE--KSDVN---------VS----DHFKIDVTNEEEVKEAVEKT 75 (269)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEE-EEESCC----CTT---------SS----EEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEeCCc--hhccC---------ce----eEEEecCCCHHHHHHHHHHH
Confidence 3344678899999999999999999999966 444332 11111 00 11223455677777788877
Q ss_pred HHc--CCcEEEEecCCC
Q 019500 120 MEA--ELDLVVCITEGI 134 (340)
Q Consensus 120 ~~~--Gvk~vvi~t~Gf 134 (340)
.+. ++..+| ...|+
T Consensus 76 ~~~~g~iD~lv-~nAg~ 91 (269)
T 3vtz_A 76 TKKYGRIDILV-NNAGI 91 (269)
T ss_dssp HHHHSCCCEEE-ECCCC
T ss_pred HHHcCCCCEEE-ECCCc
Confidence 766 577655 55554
No 432
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=76.26 E-value=5.1 Score=38.31 Aligned_cols=87 Identities=14% Similarity=0.119 Sum_probs=57.9
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHc-CCeEEEeeCCCCC--------------C---ce---------ecC--ccccc--C
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKG--------------G---TE---------HLG--LPVFN--T 90 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~-G~~vv~~VnP~~~--------------g---~~---------i~G--~p~y~--s 90 (340)
.++|.|.|. |++|+.+.+.+.+. .+++++.-+|-.. | .+ +.| ++++. +
T Consensus 11 ~~kv~INGf-GrIGr~v~ra~~~~~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~~~v~~~~~~l~v~Gk~i~v~~~~d 89 (345)
T 2b4r_O 11 ATKLGINGF-GRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKD 89 (345)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSS
T ss_pred heEEEEeCC-chHHHHHHHHHhhCCCcEEEEEcCCCCChHHHHHHhccCCCCCcCCCCEEEcCCEEEECCEEEEEEEcCC
Confidence 568888888 99999999988775 5677744333210 0 01 122 23343 4
Q ss_pred HHHhhc-cCCCcEEEEecChhhHHHHHHHHHHcCCcEEEE
Q 019500 91 VAEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVC 129 (340)
Q Consensus 91 l~dip~-~~~vDlavi~vp~~~v~~~v~ea~~~Gvk~vvi 129 (340)
.++++- +.++|+++.+++.....+.....++.|.|.+||
T Consensus 90 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVI 129 (345)
T 2b4r_O 90 PSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIM 129 (345)
T ss_dssp GGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEE
T ss_pred cccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEE
Confidence 445541 125899999998888888888888999998664
No 433
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=76.12 E-value=6.1 Score=31.37 Aligned_cols=62 Identities=11% Similarity=-0.039 Sum_probs=40.4
Q ss_pred HHhhccCCCcEEEEecCh-------h-hHHHHHHHHHH--cCCcEEEEecCCCC-hhhHHHHHHHHhccCCcEEEcc
Q 019500 92 AEAKAETKANASAIYVPP-------P-FAAAAILEAME--AELDLVVCITEGIP-QHDMVRVKAALNNQSKTRLVGP 157 (340)
Q Consensus 92 ~dip~~~~vDlavi~vp~-------~-~v~~~v~ea~~--~Gvk~vvi~t~Gf~-e~~~~~l~~~aar~~girviGP 157 (340)
.++.+ -|.+++.+|. + .+.+.++.... .|.+.+++.|.|.. ..-...+.+.+ ++.|..++|+
T Consensus 41 ~~l~~---~d~iiig~pty~~g~~p~~~~~~fl~~l~~~l~~k~~~~f~t~g~~~~~a~~~l~~~l-~~~G~~~v~~ 113 (138)
T 5nul_A 41 DELLN---EDILILGCSAMTDEVLEESEFEPFIEEISTKISGKKVALFGSYGWGDGKWMRDFEERM-NGYGCVVVET 113 (138)
T ss_dssp HHHTT---CSEEEEEECCBTTTBCCTTTHHHHHHHHGGGCTTCEEEEEEEESSSCSHHHHHHHHHH-HHTTCEECSC
T ss_pred HHHhh---CCEEEEEcCccCCCCCChHHHHHHHHHHHhhcCCCEEEEEEecCCCCChHHHHHHHHH-HHCCCEEECC
Confidence 46654 7999998883 2 45566666553 46676665565554 33355666666 6789999986
No 434
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=76.00 E-value=7.3 Score=38.14 Aligned_cols=84 Identities=19% Similarity=0.146 Sum_probs=50.8
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHH-cCCeEEEeeCCCC-----CCcee----------cCccccc-----CHHHhhccCC
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIE-YGTKMVGGVTPKK-----GGTEH----------LGLPVFN-----TVAEAKAETK 99 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~-~G~~vv~~VnP~~-----~g~~i----------~G~p~y~-----sl~dip~~~~ 99 (340)
+..+|+|+|. |++|+..++.|.+ .|.++++..|.+. .|-++ ..+.-|+ +-+++.+ .+
T Consensus 208 ~g~~vaVqG~-GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~~~~eil~-~~ 285 (415)
T 2tmg_A 208 KKATVAVQGF-GNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELLE-LD 285 (415)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEECHHHHTT-CS
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEcCchhhhc-CC
Confidence 4567889998 9999999999999 8999886544321 00110 0111121 2345443 36
Q ss_pred CcEEEEecChhhHHHHHHHHHHcCCcEEE
Q 019500 100 ANASAIYVPPPFAAAAILEAMEAELDLVV 128 (340)
Q Consensus 100 vDlavi~vp~~~v~~~v~ea~~~Gvk~vv 128 (340)
+|+++-|...... .-+.+.+.++|.|+
T Consensus 286 ~DIliP~A~~n~i--~~~~a~~l~ak~V~ 312 (415)
T 2tmg_A 286 VDILVPAALEGAI--HAGNAERIKAKAVV 312 (415)
T ss_dssp CSEEEECSSTTSB--CHHHHTTCCCSEEE
T ss_pred CcEEEecCCcCcc--CcccHHHcCCeEEE
Confidence 8999988765444 22444455777644
No 435
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A
Probab=75.96 E-value=4.3 Score=36.47 Aligned_cols=74 Identities=15% Similarity=0.215 Sum_probs=51.9
Q ss_pred CCCcEEEEecChHHHHHHHHHHHhCCCCceEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEccCCCcHHHHHHHHH
Q 019500 179 KPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIK 258 (340)
Q Consensus 179 ~~G~valvSQSG~l~~~~~~~~~~~giG~S~~vs~Gn~a~~dv~~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~~f~~ 258 (340)
..++|++|.-.|.+...+.+. +.+.|+.+.+ ++.++|+||+.+-|.....+.+.++
T Consensus 6 ~~~~V~vI~i~g~I~~~~~~~-----------------------l~~~l~~a~~-~~~~~Ivl~inspGG~v~~~~~i~~ 61 (230)
T 3viv_A 6 AKNIVYVAQIKGQITSYTYDQ-----------------------FDRYITIAEQ-DNAEAIIIELDTPGGRADAMMNIVQ 61 (230)
T ss_dssp CCCEEEEEEEESCBCHHHHHH-----------------------HHHHHHHHHH-TTCSEEEEEEEBSCEEHHHHHHHHH
T ss_pred CCCeEEEEEEeCEECHHHHHH-----------------------HHHHHHHHhc-CCCCEEEEEEeCCCcCHHHHHHHHH
Confidence 446677777777655443221 3455566655 4699999999988877788888887
Q ss_pred HhC-CCCCEEEEE---eCCCCC
Q 019500 259 ESG-TEKPIVAFI---AGLTAP 276 (340)
Q Consensus 259 a~r-~~KPVvvlk---~Grs~~ 276 (340)
.++ ..|||+++- -|....
T Consensus 62 ~i~~~~~PVia~v~p~~G~Aas 83 (230)
T 3viv_A 62 RIQQSKIPVIIYVYPPGASAAS 83 (230)
T ss_dssp HHHTCSSCEEEEECSTTCEEET
T ss_pred HHHhCCCCEEEEEecCCCEEhH
Confidence 765 789999998 565443
No 436
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=75.86 E-value=5.6 Score=35.83 Aligned_cols=90 Identities=17% Similarity=0.152 Sum_probs=52.6
Q ss_pred ccCcCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCc-EEEEecChhhHHHH
Q 019500 37 VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKAN-ASAIYVPPPFAAAA 115 (340)
Q Consensus 37 lf~p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vD-lavi~vp~~~v~~~ 115 (340)
++.-+.-.++|.|+++.+|+.+++.|.+.|++++ .++.+. +... .....+.+... ++. +..+.+..+.+.++
T Consensus 27 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~-~~~r~~--~~~~--~~~~~~~~~~~--~~~~~~~Dl~d~~~v~~~ 99 (276)
T 3r1i_A 27 LFDLSGKRALITGASTGIGKKVALAYAEAGAQVA-VAARHS--DALQ--VVADEIAGVGG--KALPIRCDVTQPDQVRGM 99 (276)
T ss_dssp GGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEESSG--GGGH--HHHHHHHHTTC--CCEEEECCTTCHHHHHHH
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEeCCH--HHHH--HHHHHHHhcCC--eEEEEEcCCCCHHHHHHH
Confidence 3433344578899999999999999999999966 444332 1111 11111222111 122 22345566777777
Q ss_pred HHHHHHc--CCcEEEEecCCC
Q 019500 116 ILEAMEA--ELDLVVCITEGI 134 (340)
Q Consensus 116 v~ea~~~--Gvk~vvi~t~Gf 134 (340)
++++.+. ++..+| -..|.
T Consensus 100 ~~~~~~~~g~iD~lv-nnAg~ 119 (276)
T 3r1i_A 100 LDQMTGELGGIDIAV-CNAGI 119 (276)
T ss_dssp HHHHHHHHSCCSEEE-ECCCC
T ss_pred HHHHHHHcCCCCEEE-ECCCC
Confidence 8777765 677755 45554
No 437
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=75.70 E-value=8.9 Score=33.66 Aligned_cols=27 Identities=19% Similarity=0.183 Sum_probs=24.4
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEE
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMV 70 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv 70 (340)
.++|.|+++.+|+.+++.|.+.|++++
T Consensus 17 ~vlVTGas~gIG~~ia~~l~~~G~~V~ 43 (247)
T 1uzm_A 17 SVLVTGGNRGIGLAIAQRLAADGHKVA 43 (247)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEE
Confidence 478899999999999999999999966
No 438
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=75.53 E-value=2.5 Score=38.23 Aligned_cols=82 Identities=16% Similarity=0.037 Sum_probs=48.7
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEE---EEecChhhHHHHHHHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANAS---AIYVPPPFAAAAILEAM 120 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDla---vi~vp~~~v~~~v~ea~ 120 (340)
.++|.|+++.+|+.+++.|.+.|++++ .++.+.. +.. -...+++.+. ..++. .+.+.++.+.++++++.
T Consensus 31 ~~lVTGas~GIG~aia~~la~~G~~V~-~~~~~~~-~~~-----~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~ 102 (280)
T 4da9_A 31 VAIVTGGRRGIGLGIARALAASGFDIA-ITGIGDA-EGV-----APVIAELSGL-GARVIFLRADLADLSSHQATVDAVV 102 (280)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEE-EEESCCH-HHH-----HHHHHHHHHT-TCCEEEEECCTTSGGGHHHHHHHHH
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCeEE-EEeCCCH-HHH-----HHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHH
Confidence 467889999999999999999999966 3432210 111 0112222211 12222 23456677778888777
Q ss_pred Hc--CCcEEEEecCCC
Q 019500 121 EA--ELDLVVCITEGI 134 (340)
Q Consensus 121 ~~--Gvk~vvi~t~Gf 134 (340)
+. ++..+| ...|+
T Consensus 103 ~~~g~iD~lv-nnAg~ 117 (280)
T 4da9_A 103 AEFGRIDCLV-NNAGI 117 (280)
T ss_dssp HHHSCCCEEE-EECC-
T ss_pred HHcCCCCEEE-ECCCc
Confidence 66 577755 45554
No 439
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=75.52 E-value=4.2 Score=37.89 Aligned_cols=36 Identities=19% Similarity=0.185 Sum_probs=28.6
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCC
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK 77 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~ 77 (340)
+..+|+|+|+ |..|..++++|...|..-+..||+..
T Consensus 35 ~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 3457888899 88999999999999976555777654
No 440
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=75.49 E-value=10 Score=35.05 Aligned_cols=88 Identities=16% Similarity=0.061 Sum_probs=52.0
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCC-------eEEEeeCCCC-----CCc--ee--------cCcccccCHHHhhccCC
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGT-------KMVGGVTPKK-----GGT--EH--------LGLPVFNTVAEAKAETK 99 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~-------~vv~~VnP~~-----~g~--~i--------~G~p~y~sl~dip~~~~ 99 (340)
..+|+|+|++|..|+.++..|.+.|+ +++ .++... .+. ++ ..+....++.+..+ +
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~-l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~--~ 80 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQ-LLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFK--D 80 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEE-EECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTT--T
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEE-EEeCCCchhhccchhhhhhcccccccCCeEeccChHHHhC--C
Confidence 46889999999999999988888775 444 555421 000 11 11222234555444 5
Q ss_pred CcEEEEecC-----h-----------hhHHHHHHHHHHcC-Cc-EEEEecC
Q 019500 100 ANASAIYVP-----P-----------PFAAAAILEAMEAE-LD-LVVCITE 132 (340)
Q Consensus 100 vDlavi~vp-----~-----------~~v~~~v~ea~~~G-vk-~vvi~t~ 132 (340)
+|+++.+.. . ..+.++++.+.+.+ .+ .++++|+
T Consensus 81 ~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~sn 131 (327)
T 1y7t_A 81 ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGN 131 (327)
T ss_dssp CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCC
Confidence 899998642 1 12344677777776 65 3455553
No 441
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=75.47 E-value=3.8 Score=39.00 Aligned_cols=34 Identities=15% Similarity=0.163 Sum_probs=25.3
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCC--eEEEeeCCC
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGT--KMVGGVTPK 76 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~--~vv~~VnP~ 76 (340)
..+|+|+|++|..|...+..+...|. +++ .+|..
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evv-LiDi~ 43 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLC-LYDPF 43 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEE-EECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEE-EEeCC
Confidence 44677889989999998888887775 444 66654
No 442
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=75.41 E-value=2 Score=39.78 Aligned_cols=68 Identities=7% Similarity=-0.035 Sum_probs=43.7
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee---cCc---ccc--cCHHHhhccCCCcEEEEecChhhH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH---LGL---PVF--NTVAEAKAETKANASAIYVPPPFA 112 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i---~G~---p~y--~sl~dip~~~~vDlavi~vp~~~v 112 (340)
..+|+|+|+ |.+|+.++..|.+.|...+..+|.+... +++ .+. .++ .++.+... ..|++|-++|....
T Consensus 141 ~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~--~aDivIn~t~~~~~ 217 (297)
T 2egg_A 141 GKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLA--EYDIIINTTSVGMH 217 (297)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGG--GCSEEEECSCTTCS
T ss_pred CCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhc--cCCEEEECCCCCCC
Confidence 446788899 8899999999999998434478876410 111 111 221 23444333 48999999987654
No 443
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=75.34 E-value=2.6 Score=43.02 Aligned_cols=55 Identities=20% Similarity=0.300 Sum_probs=39.9
Q ss_pred CHHHHHHHhhcCCCccEEEEEEccCCCcHHHHH---HHHHHhC-CCCCEEEEEeCCCCC
Q 019500 222 NFVDCVTKFIADPQTEGIILIGEIGGTAEEDAA---ALIKESG-TEKPIVAFIAGLTAP 276 (340)
Q Consensus 222 ~~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~---~f~~a~r-~~KPVvvlk~Grs~~ 276 (340)
.+.+.|+.+.+||++|+|+|.+++.|....... +.++.++ .+||||+..-|....
T Consensus 326 ~l~~~L~~a~~d~~vkaVVL~i~spGG~~~~~~~i~~~i~~l~~~~kPVia~v~g~Aas 384 (593)
T 3bf0_A 326 TTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAAS 384 (593)
T ss_dssp HHHHHHHHHHHCTTEEEEEEEEEEEEECHHHHHHHHHHHHHHHHTTCCEEEEEEEEEET
T ss_pred HHHHHHHHHHhCCCCCEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCEEEEECCChHH
Confidence 467788888999999999999997554444433 3333333 679999999886554
No 444
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=74.30 E-value=10 Score=36.10 Aligned_cols=35 Identities=26% Similarity=0.435 Sum_probs=28.6
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCC
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK 77 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~ 77 (340)
..+|+|+|+ |..|..++++|...|..-+..||+..
T Consensus 34 ~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 557888899 88999999999999987555777643
No 445
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=73.63 E-value=11 Score=32.48 Aligned_cols=28 Identities=18% Similarity=0.117 Sum_probs=25.0
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEE
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVG 71 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~ 71 (340)
.|+|.|+++.+|+.+++.|.+.|++++.
T Consensus 7 ~vlItGasggiG~~~a~~l~~~G~~V~~ 34 (247)
T 2hq1_A 7 TAIVTGSSRGLGKAIAWKLGNMGANIVL 34 (247)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEE
Confidence 5788999999999999999999999763
No 446
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=73.59 E-value=3.2 Score=39.23 Aligned_cols=36 Identities=14% Similarity=0.115 Sum_probs=29.1
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCC
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK 77 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~ 77 (340)
.-.|+|.|++|.+|...++.++..|.+++..+++.+
T Consensus 165 g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~~~~~ 200 (371)
T 3gqv_A 165 PVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHN 200 (371)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECGGG
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCHHH
Confidence 456889999999999999999889999776665543
No 447
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=73.42 E-value=8.6 Score=33.68 Aligned_cols=80 Identities=20% Similarity=0.227 Sum_probs=46.4
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCe-EEEeeCCCCCCceecCcccccCHHHhhccC-CCcEEE---EecCh-hhHHHHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTK-MVGGVTPKKGGTEHLGLPVFNTVAEAKAET-KANASA---IYVPP-PFAAAAIL 117 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~-vv~~VnP~~~g~~i~G~p~y~sl~dip~~~-~vDlav---i~vp~-~~v~~~v~ 117 (340)
.|+|.|+++.+|+.+++.|.+.|++ ++ .++.+. .. ..++++.+.. ..++.. +.+.+ +.+.+.++
T Consensus 7 ~vlVtGas~gIG~~~a~~l~~~G~~~v~-~~~r~~--~~-------~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 76 (254)
T 1sby_A 7 NVIFVAALGGIGLDTSRELVKRNLKNFV-ILDRVE--NP-------TALAELKAINPKVNITFHTYDVTVPVAESKKLLK 76 (254)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTCCSEEE-EEESSC--CH-------HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCcEEE-EEecCc--hH-------HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHH
Confidence 4678899999999999999999997 55 444332 11 1122222110 112222 22333 56666666
Q ss_pred HHHHc--CCcEEEEecCCC
Q 019500 118 EAMEA--ELDLVVCITEGI 134 (340)
Q Consensus 118 ea~~~--Gvk~vvi~t~Gf 134 (340)
++.+. ++..+| ...|+
T Consensus 77 ~~~~~~g~id~lv-~~Ag~ 94 (254)
T 1sby_A 77 KIFDQLKTVDILI-NGAGI 94 (254)
T ss_dssp HHHHHHSCCCEEE-ECCCC
T ss_pred HHHHhcCCCCEEE-ECCcc
Confidence 66655 677754 56664
No 448
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=73.27 E-value=5 Score=35.77 Aligned_cols=76 Identities=14% Similarity=0.158 Sum_probs=47.5
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCc-EEEEecChhhHHHHHHHHH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKAN-ASAIYVPPPFAAAAILEAM 120 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vD-lavi~vp~~~v~~~v~ea~ 120 (340)
.-.|+|.|+++.+|+.+++.|.+.|++++ .++.+. +..... .+. +..+.+.++.+.++++++.
T Consensus 28 ~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~r~~--~~~~~~-------------~~~~~~~Dv~d~~~v~~~~~~~~ 91 (260)
T 3un1_A 28 QKVVVITGASQGIGAGLVRAYRDRNYRVV-ATSRSI--KPSADP-------------DIHTVAGDISKPETADRIVREGI 91 (260)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEE-EEESSC--CCCSST-------------TEEEEESCTTSHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEeCCh--hhcccC-------------ceEEEEccCCCHHHHHHHHHHHH
Confidence 34578899999999999999999999966 443332 111110 011 1123455667777777776
Q ss_pred Hc--CCcEEEEecCCC
Q 019500 121 EA--ELDLVVCITEGI 134 (340)
Q Consensus 121 ~~--Gvk~vvi~t~Gf 134 (340)
+. ++..+| -..|.
T Consensus 92 ~~~g~iD~lv-~nAg~ 106 (260)
T 3un1_A 92 ERFGRIDSLV-NNAGV 106 (260)
T ss_dssp HHHSCCCEEE-ECCCC
T ss_pred HHCCCCCEEE-ECCCC
Confidence 65 677655 45554
No 449
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=72.80 E-value=2.5 Score=43.24 Aligned_cols=48 Identities=17% Similarity=0.131 Sum_probs=35.6
Q ss_pred HHHHHHHhhcCCCccEEEEEEccCC-CcHHHHHHHHHHhC----CCCCEEEEE
Q 019500 223 FVDCVTKFIADPQTEGIILIGEIGG-TAEEDAAALIKESG----TEKPIVAFI 270 (340)
Q Consensus 223 ~~d~l~~l~~Dp~T~~I~ly~E~~g-~~~~~~~~f~~a~r----~~KPVvvlk 270 (340)
+.+-|+++.+||+.+.|+||+.+.| .....+.+..++++ .+|||+++-
T Consensus 75 i~~~L~~a~~d~~ik~I~L~inspGgG~v~~~~~I~~~i~~~k~~gkpvva~~ 127 (593)
T 3bf0_A 75 IVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVG 127 (593)
T ss_dssp HHHHHHHHHHCTTCCCEEEECTEEEECCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHhCCCceEEEEEeCCCCCCcHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 3455567788999999999999876 45666665555543 479999994
No 450
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=72.77 E-value=1.5 Score=43.15 Aligned_cols=32 Identities=19% Similarity=0.244 Sum_probs=27.0
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEee
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGV 73 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~V 73 (340)
..+|+|.|++|.+|+.+++.|.+.|+++++.+
T Consensus 150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~ 181 (508)
T 4f6l_B 150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFI 181 (508)
T ss_dssp CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEE
T ss_pred CCeEEEECCccchHHHHHHHHHhcCCEEEEEE
Confidence 46789999999999999999977788877554
No 451
>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A
Probab=72.53 E-value=4.1 Score=35.91 Aligned_cols=65 Identities=14% Similarity=0.163 Sum_probs=48.7
Q ss_pred EeecCCCCCCCC---CHHHHHHHhhcCCCccEEEEEEccCCCcHHHHHHHHHHhC-CCCCEEEEEeCCCC
Q 019500 210 CVGIGGDPFNGT---NFVDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESG-TEKPIVAFIAGLTA 275 (340)
Q Consensus 210 ~vs~Gn~a~~dv---~~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~~f~~a~r-~~KPVvvlk~Grs~ 275 (340)
+|.+++.. .+- .+..-|.++.+|+..+.|.+|+.+.|.....+....+.++ .++||+++-.|...
T Consensus 29 iI~l~g~I-~~~~a~~i~~~L~~l~~~~~~~~I~l~InSPGG~v~~~~~I~~~i~~~~~~V~t~~~G~Aa 97 (203)
T 3qwd_A 29 IIMLGSQI-DDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAA 97 (203)
T ss_dssp EEEECSCB-CHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHHHSSSCEEEEEEEEEE
T ss_pred EEEEcCEE-CHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHHhcCCcEEEEeeeeh
Confidence 67777763 122 2334466777888899999999998877888888888876 78999999887644
No 452
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=72.50 E-value=9.9 Score=37.82 Aligned_cols=109 Identities=6% Similarity=-0.017 Sum_probs=62.6
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcCCeEEEe-------eCCCCCC-cee-----------cCccccc---------CHH
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGG-------VTPKKGG-TEH-----------LGLPVFN---------TVA 92 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~-------VnP~~~g-~~i-----------~G~p~y~---------sl~ 92 (340)
+..+|+|+|. |++|...++.|.+.|.++++. .||+..- +++ ..+.-|. +-+
T Consensus 251 ~g~~vaVqG~-GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~~a~~v~~~ 329 (470)
T 2bma_A 251 EKQTAVVSGS-GNVALYCVQKLLHLNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYFPNE 329 (470)
T ss_dssp GGCEEEEECS-SHHHHHHHHHHHHTTCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCSSCEECSSC
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcCCcEEecCc
Confidence 3457889998 999999999999999997754 4554310 011 0122221 002
Q ss_pred HhhccCCCcEEEEec-ChhhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEE
Q 019500 93 EAKAETKANASAIYV-PPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLV 155 (340)
Q Consensus 93 dip~~~~vDlavi~v-p~~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girvi 155 (340)
++-+ .++|+++=|. +.....+.+...++.+++.|+=.+-+....+..+ .+ ++.|+.++
T Consensus 330 ~~~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak~V~EgAN~p~T~eA~~---~L-~~rGIl~~ 388 (470)
T 2bma_A 330 KPWG-VPCTLAFPCATQNDVDLDQAKLLQKNGCILVGEGANMPSTVDAIN---LF-KSNNIIYC 388 (470)
T ss_dssp CTTS-SCCSEEEECSSTTCBCSHHHHHHHHTTCCEEECCSSSCBCHHHHH---HH-HHTTCEEE
T ss_pred Ceee-cCccEEEeccccCcCCHHHHHHHHhcCcEEEEeCCCCCCCHHHHH---HH-HHCCcEEE
Confidence 2222 2578888765 3345566777777789987553333332222222 22 45676554
No 453
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=72.25 E-value=4.6 Score=38.50 Aligned_cols=83 Identities=14% Similarity=0.082 Sum_probs=52.4
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHc-C-CeEEEeeCCCCCCceecC--cccccCHHHhhccCCCcEEEEecChhhHHHHHH
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEY-G-TKMVGGVTPKKGGTEHLG--LPVFNTVAEAKAETKANASAIYVPPPFAAAAIL 117 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~-G-~~vv~~VnP~~~g~~i~G--~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ 117 (340)
.-+|++.|| +.-|...++.+--. . ..-+.-.||.+.|..+.| +|+++ -+++.+ .++|.++|. ++....++++
T Consensus 319 gk~v~~yGa-~~~g~~l~~~~~~~~~~i~~~~D~~~~k~g~~~~g~~ipi~~-p~~~~~-~~~d~vl~~-~~~~~~ei~~ 394 (416)
T 4e2x_A 319 GRSVVGYGA-TAKSATVTNFCGIGPDLVHSVYDTTPDKQNRLTPGAHIPVRP-ASAFSD-PYPDYALLF-AWNHAEEIMA 394 (416)
T ss_dssp TCCEEEECC-CSHHHHHHHHHTCCTTTSCCEEESCGGGTTEECTTTCCEEEE-GGGCCS-SCCSEEEES-CGGGHHHHHH
T ss_pred CCeEEEEcc-ccHHHHHHHhcCCCcceeeEEEeCCccccCccCCCCCCcCCC-HHHHhh-cCCCEEEEe-cchhHHHHHH
Confidence 446788899 44565555544321 1 222235789888888888 99997 444554 379998887 5555556655
Q ss_pred H---HHHcCCcEEE
Q 019500 118 E---AMEAELDLVV 128 (340)
Q Consensus 118 e---a~~~Gvk~vv 128 (340)
+ ..+.|-|.++
T Consensus 395 ~~~~~~~~g~~~~~ 408 (416)
T 4e2x_A 395 KEQEFHQAGGRWIL 408 (416)
T ss_dssp HCHHHHHTTCEEEE
T ss_pred HHHHHHhcCCEEEE
Confidence 4 4467877643
No 454
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=72.08 E-value=2.3 Score=40.75 Aligned_cols=34 Identities=18% Similarity=0.180 Sum_probs=27.1
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCC
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK 77 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~ 77 (340)
..+|+|+|+ |.+|..+++.+...|.+++ .+|++.
T Consensus 168 g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~-~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGA-GTAGYNAARIANGMGATVT-VLDINI 201 (377)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESCH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEE-EEeCCH
Confidence 345778899 9999999999999999755 666653
No 455
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=72.07 E-value=3.8 Score=34.45 Aligned_cols=32 Identities=13% Similarity=0.227 Sum_probs=26.2
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCC
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPK 76 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~ 76 (340)
++|+|.|+++.+|+.+++.|. .|++++ .++.+
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g~~V~-~~~r~ 35 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KKAEVI-TAGRH 35 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TTSEEE-EEESS
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CCCeEE-EEecC
Confidence 358899999999999999999 899866 45443
No 456
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=71.92 E-value=3.1 Score=37.50 Aligned_cols=31 Identities=29% Similarity=0.179 Sum_probs=27.1
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEee
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGV 73 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~V 73 (340)
+||+|.|+||-.|+.+++.|.+.|++++..+
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~ 31 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVS 31 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEE
Confidence 4789999999999999999999999977443
No 457
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=71.72 E-value=4.7 Score=39.78 Aligned_cols=34 Identities=24% Similarity=0.337 Sum_probs=28.3
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCC
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTP 75 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP 75 (340)
+..+|+|+|. |++|+..++.|.+.|.++++..+.
T Consensus 234 ~g~~vaVqGf-GnVG~~~a~~L~e~GakvVavsD~ 267 (440)
T 3aog_A 234 EGARVAIQGF-GNVGNAAARAFHDHGARVVAVQDH 267 (440)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECS
T ss_pred cCCEEEEecc-CHHHHHHHHHHHHCCCEEEEEEcC
Confidence 4567889997 999999999999999998865443
No 458
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=71.69 E-value=5.9 Score=35.34 Aligned_cols=78 Identities=15% Similarity=0.081 Sum_probs=48.6
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCc-EEEEecChhhHHHHHHHHHHc
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKAN-ASAIYVPPPFAAAAILEAMEA 122 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vD-lavi~vp~~~v~~~v~ea~~~ 122 (340)
.++|.|+++.+|+.+++.|.+.|++++ .++.+. +.. .+++.+. .+. +..+.+.++.+.++++++.+.
T Consensus 29 ~vlVTGas~gIG~aia~~l~~~G~~V~-~~~r~~--~~~--------~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~ 96 (260)
T 3gem_A 29 PILITGASQRVGLHCALRLLEHGHRVI-ISYRTE--HAS--------VTELRQA-GAVALYGDFSCETGIMAFIDLLKTQ 96 (260)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEE-EEESSC--CHH--------HHHHHHH-TCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEE-EEeCCh--HHH--------HHHHHhc-CCeEEECCCCCHHHHHHHHHHHHHh
Confidence 477889999999999999999999966 444333 111 1222211 122 222345667777778777766
Q ss_pred --CCcEEEEecCCC
Q 019500 123 --ELDLVVCITEGI 134 (340)
Q Consensus 123 --Gvk~vvi~t~Gf 134 (340)
++..+| ...|.
T Consensus 97 ~g~iD~lv-~nAg~ 109 (260)
T 3gem_A 97 TSSLRAVV-HNASE 109 (260)
T ss_dssp CSCCSEEE-ECCCC
T ss_pred cCCCCEEE-ECCCc
Confidence 477655 45553
No 459
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=71.42 E-value=17 Score=31.87 Aligned_cols=31 Identities=23% Similarity=0.238 Sum_probs=25.9
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCC
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTP 75 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP 75 (340)
.++|.|+++.+|+.+++.|.+.|++++ .++.
T Consensus 9 ~vlVTGas~giG~~ia~~l~~~G~~V~-~~~r 39 (250)
T 2fwm_X 9 NVWVTGAGKGIGYATALAFVEAGAKVT-GFDQ 39 (250)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeC
Confidence 467889999999999999999999966 4443
No 460
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=71.41 E-value=14 Score=32.44 Aligned_cols=82 Identities=6% Similarity=0.063 Sum_probs=48.8
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcC---CeEEEeeCCCCCCceecCcccccCHHHhhcc-CCCcE-EEEecChhhHHHHHH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYG---TKMVGGVTPKKGGTEHLGLPVFNTVAEAKAE-TKANA-SAIYVPPPFAAAAIL 117 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G---~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~-~~vDl-avi~vp~~~v~~~v~ 117 (340)
-.|+|.|+++.+|+.+++.|.+.| ++++ .+..+. +... .+.++.+. .++.. ..+.+..+.+.++++
T Consensus 22 k~vlITGasggIG~~la~~L~~~G~~~~~V~-~~~r~~--~~~~------~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~ 92 (267)
T 1sny_A 22 NSILITGCNRGLGLGLVKALLNLPQPPQHLF-TTCRNR--EQAK------ELEDLAKNHSNIHILEIDLRNFDAYDKLVA 92 (267)
T ss_dssp SEEEESCCSSHHHHHHHHHHHTSSSCCSEEE-EEESCT--TSCH------HHHHHHHHCTTEEEEECCTTCGGGHHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHhcCCCCcEEE-EEecCh--hhhH------HHHHhhccCCceEEEEecCCChHHHHHHHH
Confidence 357889999999999999999998 8866 444332 1111 13333221 01221 123445667777777
Q ss_pred HHHHc----CCcEEEEecCCC
Q 019500 118 EAMEA----ELDLVVCITEGI 134 (340)
Q Consensus 118 ea~~~----Gvk~vvi~t~Gf 134 (340)
++.+. ++..+| ...|+
T Consensus 93 ~~~~~~g~~~id~li-~~Ag~ 112 (267)
T 1sny_A 93 DIEGVTKDQGLNVLF-NNAGI 112 (267)
T ss_dssp HHHHHHGGGCCSEEE-ECCCC
T ss_pred HHHHhcCCCCccEEE-ECCCc
Confidence 66654 577755 55554
No 461
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=71.35 E-value=2.1 Score=38.69 Aligned_cols=82 Identities=22% Similarity=0.174 Sum_probs=47.7
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcE---EEEecChhhHHHHHHHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANA---SAIYVPPPFAAAAILEAM 120 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDl---avi~vp~~~v~~~v~ea~ 120 (340)
.++|.|+++.+|+.+++.|.+.|++++....... +... .. .+++.+. ..++ ..+.+.++.+.++++++.
T Consensus 33 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~--~~~~--~~---~~~l~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~ 104 (271)
T 3v2g_A 33 TAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAA--ERAQ--AV---VSEIEQA-GGRAVAIRADNRDAEAIEQAIRETV 104 (271)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH--HHHH--HH---HHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCH--HHHH--HH---HHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHH
Confidence 4778899999999999999999999663322221 1110 11 1222211 1222 223456667777777776
Q ss_pred Hc--CCcEEEEecCCC
Q 019500 121 EA--ELDLVVCITEGI 134 (340)
Q Consensus 121 ~~--Gvk~vvi~t~Gf 134 (340)
+. ++..+| -..|+
T Consensus 105 ~~~g~iD~lv-nnAg~ 119 (271)
T 3v2g_A 105 EALGGLDILV-NSAGI 119 (271)
T ss_dssp HHHSCCCEEE-ECCCC
T ss_pred HHcCCCcEEE-ECCCC
Confidence 65 577654 45554
No 462
>3dcm_X AdoMet, uncharacterized protein TM_1570; trefoil knot, spout mtase, adoMet binding, transferase; HET: SAM; 2.00A {Thermotoga maritima}
Probab=71.34 E-value=6.8 Score=34.33 Aligned_cols=102 Identities=12% Similarity=0.048 Sum_probs=53.3
Q ss_pred hHHHHHHHHcCCeEEEeeCCCCCCce----e-------cCcccccCHHHhhccCCCcEEEEecChhhHHHHHHHHHH-cC
Q 019500 56 TFHTEQAIEYGTKMVGGVTPKKGGTE----H-------LGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEAME-AE 123 (340)
Q Consensus 56 ~~v~~~l~~~G~~vv~~VnP~~~g~~----i-------~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ea~~-~G 123 (340)
+.++|.++.+|++-++.|||....++ + .|-..-++=.|+.+ .+-++ +...+++++|-+ .|
T Consensus 32 hdiARamkt~Gl~~l~LV~P~~~~~~~a~~~~~~w~~~~Ga~~np~r~d~L~-----~a~vv---~sL~eAl~~~~~~~g 103 (192)
T 3dcm_X 32 HDIARTARTYNLKGYYIVTNLRAQQDMVSKMLKFWREGFGSRYNPSRAESLK-----LVKLK---SYLEDVLEDIESVEG 103 (192)
T ss_dssp HHHHHHHHHTTCSEEEEECCCHHHHHHHHHHHHHHHTSGGGGTCSSSHHHHT-----TEEEE---SSHHHHHHHHHHHHS
T ss_pred HHHHHHHHhcCCceEEEECCccccHHHHHHHHHhhhcccCcccCcCHHHHhc-----cCeEE---CCHHHHHHHHHhhcC
Confidence 35778999999997779999852111 1 11111122345544 22222 234566777763 46
Q ss_pred CcEEEEecCCCCh---hhHHHHHHHH-hccCCcE-EEccCCCCcccCC
Q 019500 124 LDLVVCITEGIPQ---HDMVRVKAAL-NNQSKTR-LVGPNCPGVIKPG 166 (340)
Q Consensus 124 vk~vvi~t~Gf~e---~~~~~l~~~a-ar~~gir-viGPNc~Gi~~p~ 166 (340)
-+..++.|++-.. -.-.++.+.+ ..+..+. |.|.+ -|+-|-.
T Consensus 104 ~~p~vvaTsAr~~~~~i~~~el~~~i~~~~~pvalvFG~~-~GLtnee 150 (192)
T 3dcm_X 104 ERPLIFFTSAKKRENDISFEEGRRIIIETEKPVLILLGTG-WGLPDEI 150 (192)
T ss_dssp SCCEEEECCSSCCSSCBCHHHHHHHHHHCCSCEEEEECCT-TCCCHHH
T ss_pred CccEEEEeCCCcCCCCCCHHHHHHHHHhCCCCEEEEECCC-CCCCHHH
Confidence 6666778876421 1122232222 1334444 66874 6876543
No 463
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=70.98 E-value=5.7 Score=36.92 Aligned_cols=80 Identities=15% Similarity=0.167 Sum_probs=46.9
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCC-eEEEeeCCCCC---Cc--ee------c--Cccc--ccCHHHhhccCCCcEEEEec
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGT-KMVGGVTPKKG---GT--EH------L--GLPV--FNTVAEAKAETKANASAIYV 107 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~-~vv~~VnP~~~---g~--~i------~--G~p~--y~sl~dip~~~~vDlavi~v 107 (340)
+|.|+|+ |.+|...+..+...++ +++ .+|.+.. |. ++ . ...+ +.+.+++. +.|++|++.
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l~el~-L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~~a~~---~aD~Vi~~a 75 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGYDDLL-LIARTPGKPQGEALDLAHAAAELGVDIRISGSNSYEDMR---GSDIVLVTA 75 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCSCEE-EECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGT---TCSEEEECC
T ss_pred CEEEECc-CHHHHHHHHHHHhCCCCEEE-EEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCHHHhC---CCCEEEEeC
Confidence 3667799 9999888777666676 333 4444321 10 01 1 1122 23554443 489999986
Q ss_pred Chhh----------------HHHHHHHHHHcCCcEEE
Q 019500 108 PPPF----------------AAAAILEAMEAELDLVV 128 (340)
Q Consensus 108 p~~~----------------v~~~v~ea~~~Gvk~vv 128 (340)
+... ..+++++..+..-++.+
T Consensus 76 g~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~i 112 (308)
T 2d4a_B 76 GIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIV 112 (308)
T ss_dssp SCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEE
Confidence 5443 66777777777655433
No 464
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=70.92 E-value=14 Score=36.55 Aligned_cols=109 Identities=12% Similarity=0.099 Sum_probs=61.9
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcCCeEEEe-------eCCCCCC-ceec----------C-cccc----c-----CHH
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGG-------VTPKKGG-TEHL----------G-LPVF----N-----TVA 92 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~-------VnP~~~g-~~i~----------G-~p~y----~-----sl~ 92 (340)
+..+|+|+|. |+.|+..++.|.+.|.++++. .||+..- +++. + +.-| + +-+
T Consensus 238 ~g~~VaVQG~-GnVG~~aa~~L~e~GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~~~a~~v~~~ 316 (456)
T 3r3j_A 238 ENKKCLVSGS-GNVAQYLVEKLIEKGAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLKYSKTAKYFENQ 316 (456)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHHTCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGGTCSSCEEECSC
T ss_pred cCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhhcCCCceEeCCc
Confidence 3456889998 999999999999999887643 3444210 0000 0 1111 1 112
Q ss_pred HhhccCCCcEEEEe-cChhhHHHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEE
Q 019500 93 EAKAETKANASAIY-VPPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLV 155 (340)
Q Consensus 93 dip~~~~vDlavi~-vp~~~v~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girvi 155 (340)
++-+ .++|+++=| ++.....+.++...+.+++.|+=.+-+....+..++ + ++.|+.++
T Consensus 317 ~i~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak~V~EgAN~p~T~eA~~i---L-~~rGI~~~ 375 (456)
T 3r3j_A 317 KPWN-IPCDIAFPCATQNEINENDADLFIQNKCKMIVEGANMPTHIKALHK---L-KQNNIILC 375 (456)
T ss_dssp CGGG-SCCSEEEECSCTTCBCHHHHHHHHHHTCCEEECCSSSCBCTTHHHH---H-HTTTCEEE
T ss_pred cccc-cCccEEEeCCCccchhhHHHHHHHhcCCeEEEecCCCCCCHHHHHH---H-HHCCCEEe
Confidence 3322 257888876 455666667777777788875533333332233322 2 45676554
No 465
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=70.77 E-value=24 Score=31.72 Aligned_cols=82 Identities=10% Similarity=0.056 Sum_probs=48.6
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEE---EecChhhHHHHHHHH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASA---IYVPPPFAAAAILEA 119 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlav---i~vp~~~v~~~v~ea 119 (340)
-.++|.|+++.+|+.+++.|.+.|++++ .++.+. +.. -..+.+..++...++.. +.+..+.+.++++++
T Consensus 48 k~vlVTGas~GIG~aia~~la~~G~~V~-~~~r~~--~~~-----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 119 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAKEGANIA-IAYLDE--EGD-----ANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQET 119 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEE-EEESSC--HHH-----HHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeCCc--hHH-----HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 3577889999999999999999999966 343332 110 01122222211233332 345566777777777
Q ss_pred HHc--CCcEEEEecCC
Q 019500 120 MEA--ELDLVVCITEG 133 (340)
Q Consensus 120 ~~~--Gvk~vvi~t~G 133 (340)
.+. ++..+|. ..|
T Consensus 120 ~~~~g~iD~lvn-nAg 134 (291)
T 3ijr_A 120 VRQLGSLNILVN-NVA 134 (291)
T ss_dssp HHHHSSCCEEEE-CCC
T ss_pred HHHcCCCCEEEE-CCC
Confidence 765 5777554 444
No 466
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=70.65 E-value=15 Score=32.24 Aligned_cols=32 Identities=19% Similarity=0.196 Sum_probs=26.5
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCC
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTP 75 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP 75 (340)
-.|+|.|+++.+|+.+++.|.+.|++++ .++.
T Consensus 15 k~vlITGasggiG~~la~~l~~~G~~V~-~~~r 46 (266)
T 1xq1_A 15 KTVLVTGGTKGIGHAIVEEFAGFGAVIH-TCAR 46 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEE-EEeC
Confidence 3578899999999999999999999866 4443
No 467
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=70.56 E-value=13 Score=35.81 Aligned_cols=29 Identities=14% Similarity=0.210 Sum_probs=22.0
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeC
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVT 74 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~Vn 74 (340)
+|+|+|. |..+..+++.+.+.|++++ .++
T Consensus 3 ~ilI~g~-g~~~~~i~~a~~~~G~~vv-~v~ 31 (451)
T 2vpq_A 3 KVLIANR-GEIAVRIIRACRDLGIQTV-AIY 31 (451)
T ss_dssp EEEECCC-HHHHHHHHHHHHHTTCEEE-EEE
T ss_pred eEEEeCC-CHHHHHHHHHHHHcCCEEE-EEe
Confidence 5778885 6677778888999999966 443
No 468
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=70.07 E-value=17 Score=35.06 Aligned_cols=87 Identities=10% Similarity=0.116 Sum_probs=50.1
Q ss_pred cCcCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC---ceecCc-cc-----ccCHHHhhc---cCCCcEEEE
Q 019500 38 FVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG---TEHLGL-PV-----FNTVAEAKA---ETKANASAI 105 (340)
Q Consensus 38 f~p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g---~~i~G~-p~-----y~sl~dip~---~~~vDlavi 105 (340)
|.|+ .+++|+|+ |..++.+++.+...||++. .++|+..- ..+.+. .+ ...+.++.. -..-+.+++
T Consensus 201 ~~P~-~rL~IfGA-Ghva~ala~~a~~lg~~V~-v~D~R~~~~~~~~fp~a~~~~~~~p~~~~~~~~~~~~~~~~t~vvv 277 (386)
T 2we8_A 201 YAPR-PRMLVFGA-IDFAAAVAQQGAFLGYRVT-VCDARPVFATTARFPTADEVVVDWPHRYLAAQAEAGAIDARTVVCV 277 (386)
T ss_dssp ECCC-CEEEEECC-STHHHHHHHHHHHTTCEEE-EEESCTTTSCTTTCSSSSEEEESCHHHHHHHHHHHTCCCTTCEEEE
T ss_pred cCCC-CEEEEECC-CHHHHHHHHHHHhCCCEEE-EECCchhhcccccCCCceEEEeCChHHHHHhhccccCCCCCcEEEE
Confidence 3443 47889999 8999999999999999976 78876510 001111 00 111233110 012356666
Q ss_pred ecChh-hHHHHHHHHHHcC-CcEE
Q 019500 106 YVPPP-FAAAAILEAMEAE-LDLV 127 (340)
Q Consensus 106 ~vp~~-~v~~~v~ea~~~G-vk~v 127 (340)
.+... .=..+++++++.+ ...+
T Consensus 278 lTh~~~~D~~~L~~aL~~~~~~YI 301 (386)
T 2we8_A 278 LTHDPKFDVPLLEVALRLPDIAYI 301 (386)
T ss_dssp CCCCHHHHHHHHHHHTTSSCCSEE
T ss_pred EECChHhHHHHHHHHhcCCCCCEE
Confidence 66643 4455666777766 6653
No 469
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=69.97 E-value=8.1 Score=33.01 Aligned_cols=68 Identities=15% Similarity=0.097 Sum_probs=38.6
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecC-hhhHHHHHHHHHHc
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVP-PPFAAAAILEAMEA 122 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp-~~~v~~~v~ea~~~ 122 (340)
+++|+|+ |..|+.++..+.+.+|++++.++.+. |+|++.+.++ +-++++.+ +..-....+++.+.
T Consensus 5 ~~~I~Ga-gg~gk~v~~~~~~~~~~v~~f~Dd~~------g~~vig~~~~-------~~~~iaig~~~~r~~~~~~l~~~ 70 (194)
T 3bfp_A 5 KIYIYGA-SGHGLVCEDVAKNMGYKECIFLDDFK------GMKFESTLPK-------YDFFIAIGNNEIRKKIYQKISEN 70 (194)
T ss_dssp EEEEEC---CHHHHHHHHHHHHTCSEEEEEC--------------CCCCC-------CEEEECCCCHHHHHHHHHHHHTT
T ss_pred cEEEEeC-CHHHHHHHHHHHhCCCeEEEEEeCCC------CCeEECCccc-------ceEEEEeCCHHHHHHHHHHHHHc
Confidence 5788899 66888888888777899887777431 5666654332 24566664 34444555666666
Q ss_pred CCc
Q 019500 123 ELD 125 (340)
Q Consensus 123 Gvk 125 (340)
+.+
T Consensus 71 ~~~ 73 (194)
T 3bfp_A 71 GFK 73 (194)
T ss_dssp TCC
T ss_pred CCc
Confidence 664
No 470
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=69.65 E-value=6.1 Score=34.84 Aligned_cols=82 Identities=16% Similarity=0.192 Sum_probs=49.3
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChhhHHHHHHHHHHc
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEAMEA 122 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ea~~~ 122 (340)
-.++|.|+++.+|+.+++.|.+.|++++ .++.+. +... ...+++.+. ..-+..+.+.++.+.++++++.+.
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G~~V~-~~~r~~--~~~~-----~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~~~~ 80 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERGAKVI-GTATSE--SGAQ-----AISDYLGDN-GKGMALNVTNPESIEAVLKAITDE 80 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEE-EEESSH--HHHH-----HHHHHHGGG-EEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEeCCH--HHHH-----HHHHHhccc-ceEEEEeCCCHHHHHHHHHHHHHH
Confidence 3577899999999999999999999966 444332 1110 001122211 011233455677777777777765
Q ss_pred --CCcEEEEecCCC
Q 019500 123 --ELDLVVCITEGI 134 (340)
Q Consensus 123 --Gvk~vvi~t~Gf 134 (340)
++..+| -..|+
T Consensus 81 ~g~iD~lv-~nAg~ 93 (248)
T 3op4_A 81 FGGVDILV-NNAGI 93 (248)
T ss_dssp HCCCSEEE-ECCCC
T ss_pred cCCCCEEE-ECCCC
Confidence 577654 45554
No 471
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=69.34 E-value=8 Score=35.99 Aligned_cols=85 Identities=12% Similarity=0.149 Sum_probs=50.3
Q ss_pred EEEEeCCCCCcchHHHHHHHHcC--CeEE-EeeCCCCCCc--eec-C-----cccc---cCHHHhhccCCCcEEEEecC-
Q 019500 44 RVICQGITGKNGTFHTEQAIEYG--TKMV-GGVTPKKGGT--EHL-G-----LPVF---NTVAEAKAETKANASAIYVP- 108 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G--~~vv-~~VnP~~~g~--~i~-G-----~p~y---~sl~dip~~~~vDlavi~vp- 108 (340)
+|+|+|++|..|...+..|.+.| .+++ +.+|+.. +. ++. . +..+ .++++... +.|+++++..
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~-~~a~dL~~~~~~~~l~~~~~t~d~~~a~~--~aDvVvi~ag~ 78 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTP-GVAADLSHIETRATVKGYLGPEQLPDCLK--GCDVVVIPAGV 78 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHH-HHHHHHTTSSSSCEEEEEESGGGHHHHHT--TCSEEEECCSC
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccH-HHHHHHhccCcCceEEEecCCCCHHHHhC--CCCEEEECCCc
Confidence 67888999999999888888776 3433 2344411 11 111 1 2222 25665443 5899999862
Q ss_pred -h--------------hhHHHHHHHHHHcCCcEEEEec
Q 019500 109 -P--------------PFAAAAILEAMEAELDLVVCIT 131 (340)
Q Consensus 109 -~--------------~~v~~~v~ea~~~Gvk~vvi~t 131 (340)
. ..+.++++++.+.+-++.+++.
T Consensus 79 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~ 116 (314)
T 1mld_A 79 PRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICII 116 (314)
T ss_dssp CCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEE
Confidence 1 3356666777777765544443
No 472
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=68.94 E-value=19 Score=35.48 Aligned_cols=33 Identities=21% Similarity=0.318 Sum_probs=24.3
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCC
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPK 76 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~ 76 (340)
+.+|.|+|. |-+|--.+-.+.+.|++++ ++|.+
T Consensus 21 m~~IaViGl-GYVGLp~A~~~A~~G~~V~-g~Did 53 (444)
T 3vtf_A 21 MASLSVLGL-GYVGVVHAVGFALLGHRVV-GYDVN 53 (444)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCEEE-EECSC
T ss_pred CCEEEEEcc-CHHHHHHHHHHHhCCCcEE-EEECC
Confidence 456777798 8888777778888899977 55443
No 473
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=68.91 E-value=16 Score=34.31 Aligned_cols=88 Identities=18% Similarity=0.196 Sum_probs=52.4
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCC-CceecCcccccCHHHhhccCCCcEE---EEecChhhHHHHHHH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKG-GTEHLGLPVFNTVAEAKAETKANAS---AIYVPPPFAAAAILE 118 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~-g~~i~G~p~y~sl~dip~~~~vDla---vi~vp~~~v~~~v~e 118 (340)
-.++|.|+++.+|..+++.|.+.|++++ .+..+.. .++..+ .++...+++... ..++. .+.+..+.+.+++++
T Consensus 46 k~vlVTGas~GIG~aia~~La~~Ga~Vv-l~~r~~~~~~~l~~-~l~~~~~~~~~~-g~~~~~~~~Dv~d~~~v~~~~~~ 122 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAAKDGANIV-IAAKTAQPHPKLLG-TIYTAAEEIEAV-GGKALPCIVDVRDEQQISAAVEK 122 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEE-EEESCCSCCSSSCC-CHHHHHHHHHHT-TCEEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEeCCChHHHHHHHHHHHHCCCEEE-EEECChhhhhhhHH-HHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHH
Confidence 3477889999999999999999999966 3333221 011111 112223333221 12222 345567778888888
Q ss_pred HHHc--CCcEEEEecCCC
Q 019500 119 AMEA--ELDLVVCITEGI 134 (340)
Q Consensus 119 a~~~--Gvk~vvi~t~Gf 134 (340)
+.+. ++..+| ...|+
T Consensus 123 ~~~~~g~iDilV-nnAG~ 139 (346)
T 3kvo_A 123 AIKKFGGIDILV-NNASA 139 (346)
T ss_dssp HHHHHSCCCEEE-ECCCC
T ss_pred HHHHcCCCCEEE-ECCCC
Confidence 8776 688755 45553
No 474
>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1
Probab=68.90 E-value=5.5 Score=35.01 Aligned_cols=66 Identities=12% Similarity=0.124 Sum_probs=48.0
Q ss_pred EeecCCCCCCCC---CHHHHHHHhhcCCCccEEEEEEccCCCcHHHHHHHHHHhC-CCCCEEEEEeCCCCC
Q 019500 210 CVGIGGDPFNGT---NFVDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESG-TEKPIVAFIAGLTAP 276 (340)
Q Consensus 210 ~vs~Gn~a~~dv---~~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~~f~~a~r-~~KPVvvlk~Grs~~ 276 (340)
+|.+++.. .+- .+..-|.|+.+|+..+.|.+|+.+.|.....+....+.++ .++||+++-.|....
T Consensus 32 iI~l~g~I-~~~~a~~i~~~L~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~~~~~v~t~~~G~AaS 101 (201)
T 3p2l_A 32 IVFLNGEV-NDHSANLVIAQLLFLESEDPDKDIYFYINSPGGMVTAGMGVYDTMQFIKPDVSTICIGLAAS 101 (201)
T ss_dssp EEEEESCB-CHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHHHSSSCEEEEEEEEEET
T ss_pred EEEEcCEE-CHHHHHHHHHHHHHHHhcCCCCCEEEEEECCCCCHHHHHHHHHHHHHhCCCeEEEEcCEehh
Confidence 56666653 121 2234456777777899999999998877888888888776 679999999886443
No 475
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=68.83 E-value=5.5 Score=35.79 Aligned_cols=83 Identities=14% Similarity=0.151 Sum_probs=48.7
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCc-EEEEecChhhHHHHHHHHHHc
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKAN-ASAIYVPPPFAAAAILEAMEA 122 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vD-lavi~vp~~~v~~~v~ea~~~ 122 (340)
.++|.|+++.+|+.+++.|.+.|++++ .++.+. +... .....+.+... ++. +..+.+..+.+.++++++.+.
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~-~~~r~~--~~~~--~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (270)
T 3ftp_A 30 VAIVTGASRGIGRAIALELARRGAMVI-GTATTE--AGAE--GIGAAFKQAGL--EGRGAVLNVNDATAVDALVESTLKE 102 (270)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEE-EEESSH--HHHH--HHHHHHHHHTC--CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEE-EEeCCH--HHHH--HHHHHHHhcCC--cEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 467889999999999999999999866 444332 1111 01111222111 121 223445667777777777665
Q ss_pred --CCcEEEEecCCC
Q 019500 123 --ELDLVVCITEGI 134 (340)
Q Consensus 123 --Gvk~vvi~t~Gf 134 (340)
++..+| -..|+
T Consensus 103 ~g~iD~lv-nnAg~ 115 (270)
T 3ftp_A 103 FGALNVLV-NNAGI 115 (270)
T ss_dssp HSCCCEEE-ECCCC
T ss_pred cCCCCEEE-ECCCC
Confidence 577654 55554
No 476
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=68.51 E-value=8.3 Score=33.90 Aligned_cols=79 Identities=19% Similarity=0.119 Sum_probs=48.0
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEE---EecChhhHHHHHHHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASA---IYVPPPFAAAAILEAM 120 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlav---i~vp~~~v~~~v~ea~ 120 (340)
.++|.|+++.+|+.+++.|.+.|++++ .++.+. + .. ..+++... ..++.. +.+.++.+.++++++.
T Consensus 6 ~vlVTGas~giG~~ia~~l~~~G~~V~-~~~r~~--~----~~---~~~~l~~~-~~~~~~~~~D~~~~~~v~~~~~~~~ 74 (255)
T 2q2v_A 6 TALVTGSTSGIGLGIAQVLARAGANIV-LNGFGD--P----AP---ALAEIARH-GVKAVHHPADLSDVAQIEALFALAE 74 (255)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEE-EECSSC--C----HH---HHHHHHTT-SCCEEEECCCTTSHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeCCc--h----HH---HHHHHHhc-CCceEEEeCCCCCHHHHHHHHHHHH
Confidence 477899999999999999999999866 454433 1 01 12233211 122222 2345566667777666
Q ss_pred Hc--CCcEEEEecCCC
Q 019500 121 EA--ELDLVVCITEGI 134 (340)
Q Consensus 121 ~~--Gvk~vvi~t~Gf 134 (340)
+. ++..+| ...|+
T Consensus 75 ~~~g~id~lv-~~Ag~ 89 (255)
T 2q2v_A 75 REFGGVDILV-NNAGI 89 (255)
T ss_dssp HHHSSCSEEE-ECCCC
T ss_pred HHcCCCCEEE-ECCCC
Confidence 55 677755 45553
No 477
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=68.33 E-value=21 Score=31.40 Aligned_cols=81 Identities=16% Similarity=0.065 Sum_probs=49.1
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEE---EEecChhhHHHHHHHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANAS---AIYVPPPFAAAAILEAM 120 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDla---vi~vp~~~v~~~v~ea~ 120 (340)
.++|.|+++.+|+.+++.|.+.|++++ .++.+. +... .. .+++.+. ..++. .+.+.++.+.++++++.
T Consensus 9 ~vlVTGas~GIG~aia~~l~~~G~~V~-~~~r~~--~~~~--~~---~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (252)
T 3h7a_A 9 TVAVIGAGDYIGAEIAKKFAAEGFTVF-AGRRNG--EKLA--PL---VAEIEAA-GGRIVARSLDARNEDEVTAFLNAAD 79 (252)
T ss_dssp EEEEECCSSHHHHHHHHHHHHTTCEEE-EEESSG--GGGH--HH---HHHHHHT-TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEE-EEeCCH--HHHH--HH---HHHHHhc-CCeEEEEECcCCCHHHHHHHHHHHH
Confidence 467889999999999999999999866 444433 1111 11 2222221 12222 23456677777888777
Q ss_pred HcC-CcEEEEecCCC
Q 019500 121 EAE-LDLVVCITEGI 134 (340)
Q Consensus 121 ~~G-vk~vvi~t~Gf 134 (340)
+.| +.. +|...|.
T Consensus 80 ~~g~id~-lv~nAg~ 93 (252)
T 3h7a_A 80 AHAPLEV-TIFNVGA 93 (252)
T ss_dssp HHSCEEE-EEECCCC
T ss_pred hhCCceE-EEECCCc
Confidence 764 444 5566664
No 478
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=68.10 E-value=9.2 Score=33.66 Aligned_cols=78 Identities=12% Similarity=0.060 Sum_probs=47.0
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEEEEecChhhHHHHHHHHHHc-
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEAMEA- 122 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ea~~~- 122 (340)
.++|.|+++.+|+.+++.|.+.|++++ .++.+. +... .+.++... ..++..+ ..+.+.+.++++.+.
T Consensus 3 ~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~r~~--~~~~------~~~~l~~~-~~~~~~~--d~~~v~~~~~~~~~~~ 70 (254)
T 1zmt_A 3 TAIVTNVKHFGGMGSALRLSEAGHTVA-CHDESF--KQKD------ELEAFAET-YPQLKPM--SEQEPAELIEAVTSAY 70 (254)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEE-ECCGGG--GSHH------HHHHHHHH-CTTSEEC--CCCSHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEE-EEeCCH--HHHH------HHHHHHhc-CCcEEEE--CHHHHHHHHHHHHHHh
Confidence 467899999999999999999999866 454332 1111 11222111 1233222 556666777776655
Q ss_pred -CCcEEEEecCCC
Q 019500 123 -ELDLVVCITEGI 134 (340)
Q Consensus 123 -Gvk~vvi~t~Gf 134 (340)
++..+| ...|+
T Consensus 71 g~iD~lv-~nAg~ 82 (254)
T 1zmt_A 71 GQVDVLV-SNDIF 82 (254)
T ss_dssp SCCCEEE-EECCC
T ss_pred CCCCEEE-ECCCc
Confidence 577655 45554
No 479
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=67.90 E-value=9 Score=33.47 Aligned_cols=81 Identities=20% Similarity=0.147 Sum_probs=47.9
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcE---EEEecChhhHHHHHHHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANA---SAIYVPPPFAAAAILEAM 120 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDl---avi~vp~~~v~~~v~ea~ 120 (340)
.++|.|+++.+|+.+++.|.+.|++++ .++.+. +... .. .+++.+. ..++ ..+.+.++.+.+.++++.
T Consensus 11 ~vlITGas~giG~~~a~~l~~~G~~V~-~~~r~~--~~~~--~~---~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (253)
T 3qiv_A 11 VGIVTGSGGGIGQAYAEALAREGAAVV-VADINA--EAAE--AV---AKQIVAD-GGTAISVAVDVSDPESAKAMADRTL 81 (253)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEE-EEESCH--HHHH--HH---HHHHHHT-TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEE-EEcCCH--HHHH--HH---HHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 467889999999999999999999966 454432 1111 11 1222211 1122 223445666667777666
Q ss_pred Hc--CCcEEEEecCCC
Q 019500 121 EA--ELDLVVCITEGI 134 (340)
Q Consensus 121 ~~--Gvk~vvi~t~Gf 134 (340)
+. ++..+| ...|+
T Consensus 82 ~~~g~id~li-~~Ag~ 96 (253)
T 3qiv_A 82 AEFGGIDYLV-NNAAI 96 (253)
T ss_dssp HHHSCCCEEE-ECCCC
T ss_pred HHcCCCCEEE-ECCCc
Confidence 55 577654 55554
No 480
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=67.73 E-value=9.6 Score=34.32 Aligned_cols=87 Identities=15% Similarity=0.151 Sum_probs=50.3
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCC-CceecCcccccCHHHhhccCCCcEEE---EecChhhHHHHHHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKG-GTEHLGLPVFNTVAEAKAETKANASA---IYVPPPFAAAAILEA 119 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~-g~~i~G~p~y~sl~dip~~~~vDlav---i~vp~~~v~~~v~ea 119 (340)
.++|.|+++.+|+.+++.|.+.|++++ .++.+.. .++..+ ......+++.+. ..++.. +.+.++.+.++++++
T Consensus 11 ~vlVTGas~GIG~aia~~l~~~G~~V~-~~~r~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~ 87 (285)
T 3sc4_A 11 TMFISGGSRGIGLAIAKRVAADGANVA-LVAKSAEPHPKLPG-TIYTAAKEIEEA-GGQALPIVGDIRDGDAVAAAVAKT 87 (285)
T ss_dssp EEEEESCSSHHHHHHHHHHHTTTCEEE-EEESCCSCCSSSCC-CHHHHHHHHHHH-TSEEEEEECCTTSHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEE-EEECChhhhhhhhH-HHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHH
Confidence 467889999999999999999999866 4443321 011100 011112222211 123222 345667777788877
Q ss_pred HHc--CCcEEEEecCCC
Q 019500 120 MEA--ELDLVVCITEGI 134 (340)
Q Consensus 120 ~~~--Gvk~vvi~t~Gf 134 (340)
.+. ++..+| ...|+
T Consensus 88 ~~~~g~id~lv-nnAg~ 103 (285)
T 3sc4_A 88 VEQFGGIDICV-NNASA 103 (285)
T ss_dssp HHHHSCCSEEE-ECCCC
T ss_pred HHHcCCCCEEE-ECCCC
Confidence 766 677755 55554
No 481
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=67.52 E-value=8.7 Score=36.13 Aligned_cols=81 Identities=20% Similarity=0.199 Sum_probs=48.1
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCC--eEEEeeCCCCCCcee--------cCccc-------cc-CHHHhhccCCCcEE
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGT--KMVGGVTPKKGGTEH--------LGLPV-------FN-TVAEAKAETKANAS 103 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~--~vv~~VnP~~~g~~i--------~G~p~-------y~-sl~dip~~~~vDla 103 (340)
..+|.|+|+ |.+|..++..|...|. +++ .+|... +.. .+.|. +. +.+++. +.|++
T Consensus 5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~-l~D~~~--~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~---~aDvV 77 (326)
T 3pqe_A 5 VNKVALIGA-GFVGSSYAFALINQGITDELV-VIDVNK--EKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCK---DADIV 77 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEE-EECSCH--HHHHHHHHHHHHTGGGSSSCCEEEEECGGGGT---TCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEE-EEecch--HHHHHHHHHHHhccccccCCeEEEeCcHHHhC---CCCEE
Confidence 457788898 9999999888888776 444 666543 111 12233 22 233333 48999
Q ss_pred EEecCh----------------hhHHHHHHHHHHcCCcEEEE
Q 019500 104 AIYVPP----------------PFAAAAILEAMEAELDLVVC 129 (340)
Q Consensus 104 vi~vp~----------------~~v~~~v~ea~~~Gvk~vvi 129 (340)
|++.+. ..+.++++.+.+.+-+++++
T Consensus 78 vi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vl 119 (326)
T 3pqe_A 78 CICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFL 119 (326)
T ss_dssp EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred EEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEE
Confidence 998632 22345556666666555433
No 482
>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1
Probab=67.52 E-value=5.9 Score=35.08 Aligned_cols=65 Identities=12% Similarity=0.053 Sum_probs=45.1
Q ss_pred EEeecCCCCCCCCCHH---HHHHHhhcCCCccEEEEEEccCCCcHHHHHHHHHHhC-CCCCEEEEEeCCCC
Q 019500 209 TCVGIGGDPFNGTNFV---DCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESG-TEKPIVAFIAGLTA 275 (340)
Q Consensus 209 ~~vs~Gn~a~~dv~~~---d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~~f~~a~r-~~KPVvvlk~Grs~ 275 (340)
.+|-++++. .+-+.. .-|.++.+|+. +.|.||+.+.|-....+....++++ .++||+++-.|...
T Consensus 40 riI~l~G~I-~~~~a~~i~~~L~~l~~~~~-k~I~l~INSPGGsv~a~~~I~~~i~~~~~pV~t~v~g~AA 108 (215)
T 2f6i_A 40 RIIYLTDEI-NKKTADELISQLLYLDNINH-NDIKIYINSPGGSINEGLAILDIFNYIKSDIQTISFGLVA 108 (215)
T ss_dssp TEEEECSCB-CHHHHHHHHHHHHHHHHHCC-SCEEEEEEECCBCHHHHHHHHHHHHHSSSCEEEEEEEEEC
T ss_pred eEEEEccEE-CHHHHHHHHHHHHHHHhCCC-CcEEEEEECCCCCHHHHHHHHHHHHhcCCCEEEEEeeEhH
Confidence 356666653 122222 33455555555 9999999998877888888888876 67899999887544
No 483
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=67.39 E-value=28 Score=34.05 Aligned_cols=33 Identities=15% Similarity=0.150 Sum_probs=25.5
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCC
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTP 75 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP 75 (340)
..+|+|+|+ |..|..++++|...|..-+..+|+
T Consensus 40 ~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~ 72 (434)
T 1tt5_B 40 TCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDM 72 (434)
T ss_dssp TCCEEEECS-STHHHHHHHHHHHTTCCCEEEEEC
T ss_pred CCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 345677799 889999999999999864446654
No 484
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=67.36 E-value=12 Score=35.13 Aligned_cols=39 Identities=21% Similarity=0.219 Sum_probs=25.1
Q ss_pred cccCcCCeEEEEeCCCCCcchHHHHHHHHcCC-eEEEeeCC
Q 019500 36 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGT-KMVGGVTP 75 (340)
Q Consensus 36 ~lf~p~~iaViVvGasgk~G~~v~~~l~~~G~-~vv~~VnP 75 (340)
+++..++.+|.|+|+ |..|...+-.+...+. ..+..+|.
T Consensus 3 ~~~~~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di 42 (326)
T 2zqz_A 3 SITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp ---CCCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred ccccCCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 456666788999999 9999887776666554 22325554
No 485
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=67.32 E-value=9.8 Score=38.31 Aligned_cols=35 Identities=11% Similarity=0.012 Sum_probs=28.3
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCC
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK 77 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~ 77 (340)
+.+|+|+|+ |..|..++++|...|..-+..+|+..
T Consensus 32 ~~~VlvvG~-GGlGseiak~La~aGVg~itlvD~D~ 66 (531)
T 1tt5_A 32 SAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQ 66 (531)
T ss_dssp HCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECCCB
T ss_pred cCeEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 456788899 88999999999999987555777653
No 486
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=67.23 E-value=4.7 Score=37.39 Aligned_cols=76 Identities=12% Similarity=0.069 Sum_probs=45.9
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCcee----cCccccc----C---HHHhhccCCCcEEEEecChhh-
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH----LGLPVFN----T---VAEAKAETKANASAIYVPPPF- 111 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i----~G~p~y~----s---l~dip~~~~vDlavi~vp~~~- 111 (340)
.|+|+|. |+.|+.+++.|.+.|+ ++ .++++. +.+ .|++++. + +.+..- .+.|.++++++.+.
T Consensus 117 ~viI~G~-G~~g~~l~~~L~~~g~-v~-vid~~~--~~~~~~~~~~~~i~gd~~~~~~L~~a~i-~~a~~vi~~~~~d~~ 190 (336)
T 1lnq_A 117 HVVICGW-SESTLECLRELRGSEV-FV-LAEDEN--VRKKVLRSGANFVHGDPTRVSDLEKANV-RGARAVIVDLESDSE 190 (336)
T ss_dssp EEEEESC-CHHHHHHHTTGGGSCE-EE-EESCGG--GHHHHHHTTCEEEESCTTSHHHHHHTCS-TTEEEEEECCSSHHH
T ss_pred CEEEECC-cHHHHHHHHHHHhCCc-EE-EEeCCh--hhhhHHhCCcEEEEeCCCCHHHHHhcCh-hhccEEEEcCCccHH
Confidence 5888898 9999999999988887 55 677654 222 2344332 1 222211 25788888887553
Q ss_pred HHHHHHHHHHcCCc
Q 019500 112 AAAAILEAMEAELD 125 (340)
Q Consensus 112 v~~~v~ea~~~Gvk 125 (340)
...++..+-+.+.+
T Consensus 191 n~~~~~~ar~~~~~ 204 (336)
T 1lnq_A 191 TIHCILGIRKIDES 204 (336)
T ss_dssp HHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHCCC
Confidence 33344444455554
No 487
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=67.16 E-value=25 Score=31.69 Aligned_cols=38 Identities=13% Similarity=0.088 Sum_probs=28.5
Q ss_pred ccCcCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCC
Q 019500 37 VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTP 75 (340)
Q Consensus 37 lf~p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP 75 (340)
+|.=+.-.++|.|++..+|+.+++.|.+.|++++ ..+.
T Consensus 4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv-i~~~ 41 (255)
T 4g81_D 4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVI-LNDI 41 (255)
T ss_dssp TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEE-ECCS
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEEC
Confidence 4433333467889999999999999999999866 4443
No 488
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=66.87 E-value=24 Score=34.82 Aligned_cols=86 Identities=10% Similarity=0.042 Sum_probs=52.0
Q ss_pred CCeEEEEeCCCCCcchHHHHHHHHcCCeEEEe-------eCCCCC-Cc-eec-----------Cccccc--------CHH
Q 019500 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGG-------VTPKKG-GT-EHL-----------GLPVFN--------TVA 92 (340)
Q Consensus 41 ~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~-------VnP~~~-g~-~i~-----------G~p~y~--------sl~ 92 (340)
+..+|+|+|. |++|...++.|.+.|.++++. +||+.. -. ++. .+.-|+ +-+
T Consensus 229 ~g~~v~VqG~-GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y~~~~~a~~i~~~ 307 (449)
T 1bgv_A 229 VGKTVALAGF-GNVAWGAAKKLAELGAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKFGVQFFPGE 307 (449)
T ss_dssp TTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHHTCEEEETC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhcccccCCEEeCch
Confidence 4567889998 999999999999999998864 455431 00 100 111111 001
Q ss_pred HhhccCCCcEEEEec-ChhhHHHHHHHHHHcCCcEEE
Q 019500 93 EAKAETKANASAIYV-PPPFAAAAILEAMEAELDLVV 128 (340)
Q Consensus 93 dip~~~~vDlavi~v-p~~~v~~~v~ea~~~Gvk~vv 128 (340)
++-+ .++|+++=|. +.....+.+.+..+.|+|.|+
T Consensus 308 e~~~-~~~Dil~P~A~~~~I~~~na~~l~a~g~kiV~ 343 (449)
T 1bgv_A 308 KPWG-QKVDIIMPCATQNDVDLEQAKKIVANNVKYYI 343 (449)
T ss_dssp CGGG-SCCSEEECCSCTTCBCHHHHHHHHHTTCCEEE
T ss_pred hhhc-CCcceeeccccccccchhhHHHHHhcCCeEEE
Confidence 1221 2578777654 334456777777778888754
No 489
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=66.72 E-value=6.9 Score=34.30 Aligned_cols=86 Identities=17% Similarity=0.134 Sum_probs=49.1
Q ss_pred cCCeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcEE---EEecChhhHHHHH
Q 019500 40 DKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANAS---AIYVPPPFAAAAI 116 (340)
Q Consensus 40 p~~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDla---vi~vp~~~v~~~v 116 (340)
++.-.|+|.|+++.+|+.+++.|.+.|++++...+++. ... .. .++++.+. ..++. .+.+..+.+.+.+
T Consensus 11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~--~~~--~~---~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~ 82 (256)
T 3ezl_A 11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNS--PRR--VK---WLEDQKAL-GFDFYASEGNVGDWDSTKQAF 82 (256)
T ss_dssp --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTC--SSH--HH---HHHHHHHT-TCCCEEEECCTTCHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCH--HHH--HH---HHHHHHhc-CCeeEEEecCCCCHHHHHHHH
Confidence 44556788999999999999999999999774443433 111 01 12222211 12222 2244566677777
Q ss_pred HHHHHc--CCcEEEEecCCC
Q 019500 117 LEAMEA--ELDLVVCITEGI 134 (340)
Q Consensus 117 ~ea~~~--Gvk~vvi~t~Gf 134 (340)
+++.+. ++.. +|...|+
T Consensus 83 ~~~~~~~g~id~-lv~~Ag~ 101 (256)
T 3ezl_A 83 DKVKAEVGEIDV-LVNNAGI 101 (256)
T ss_dssp HHHHHHTCCEEE-EEECCCC
T ss_pred HHHHHhcCCCCE-EEECCCC
Confidence 777665 3554 4455554
No 490
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=66.65 E-value=17 Score=34.08 Aligned_cols=83 Identities=13% Similarity=0.005 Sum_probs=48.7
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCC-eEEEeeCCCCC---Cc--ee------c--Cccc--ccCHHHhhccCCCcEEEEe
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGT-KMVGGVTPKKG---GT--EH------L--GLPV--FNTVAEAKAETKANASAIY 106 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~-~vv~~VnP~~~---g~--~i------~--G~p~--y~sl~dip~~~~vDlavi~ 106 (340)
.+|.|+|+ |.+|..++..+...|. +++ .+|.... |. ++ . ...+ +.+.+++. +.|++|++
T Consensus 8 ~kI~viGa-G~vG~~~a~~l~~~~~~~v~-L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~~a~~---~aDiVIia 82 (324)
T 3gvi_A 8 NKIALIGS-GMIGGTLAHLAGLKELGDVV-LFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDYAAIE---GADVVIVT 82 (324)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEE-EECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSGGGGT---TCSEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEE-EEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCHHHHC---CCCEEEEc
Confidence 46778899 9999998888888777 643 4444331 00 11 1 1222 24554443 48999998
Q ss_pred cC----------------hhhHHHHHHHHHHcCCcEEEEe
Q 019500 107 VP----------------PPFAAAAILEAMEAELDLVVCI 130 (340)
Q Consensus 107 vp----------------~~~v~~~v~ea~~~Gvk~vvi~ 130 (340)
.+ ...+.+++++..+.+-++++++
T Consensus 83 ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iiv 122 (324)
T 3gvi_A 83 AGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVIC 122 (324)
T ss_dssp CSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred cCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEe
Confidence 63 1234556666667775554433
No 491
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=66.21 E-value=8.9 Score=33.98 Aligned_cols=82 Identities=20% Similarity=0.126 Sum_probs=48.9
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhcc-CCCc-EEEEecChhhHHHHHHHHHH
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAE-TKAN-ASAIYVPPPFAAAAILEAME 121 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~-~~vD-lavi~vp~~~v~~~v~ea~~ 121 (340)
.++|.|+++.+|+.+++.|.+.|++++...+... +... ...+++.+. .++. +..+.+.++.+.+.++++.+
T Consensus 10 ~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~--~~~~-----~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (259)
T 3edm_A 10 TIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAA--EGAA-----TAVAEIEKLGRSALAIKADLTNAAEVEAAISAAAD 82 (259)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSC--HHHH-----HHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCH--HHHH-----HHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 5678899999999999999999999763324332 1110 112222211 0122 22345567778888888877
Q ss_pred c--CCcEEEEecCC
Q 019500 122 A--ELDLVVCITEG 133 (340)
Q Consensus 122 ~--Gvk~vvi~t~G 133 (340)
. ++..+| ...|
T Consensus 83 ~~g~id~lv-~nAg 95 (259)
T 3edm_A 83 KFGEIHGLV-HVAG 95 (259)
T ss_dssp HHCSEEEEE-ECCC
T ss_pred HhCCCCEEE-ECCC
Confidence 6 566655 4444
No 492
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=66.16 E-value=7.9 Score=34.79 Aligned_cols=80 Identities=16% Similarity=0.090 Sum_probs=49.6
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCc-EEEEecChhhHHHHHHHHHHc
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKAN-ASAIYVPPPFAAAAILEAMEA 122 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vD-lavi~vp~~~v~~~v~ea~~~ 122 (340)
.++|.|+++.+|+.+++.|.+.|++++ .++.+. +.. -...+++.. ++. +..+.+.++.+.++++++.+.
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~-~~~r~~--~~~-----~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~ 99 (272)
T 4dyv_A 30 IAIVTGAGSGVGRAVAVALAGAGYGVA-LAGRRL--DAL-----QETAAEIGD--DALCVPTDVTDPDSVRALFTATVEK 99 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEE-EEESCH--HHH-----HHHHHHHTS--CCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEE-EEECCH--HHH-----HHHHHHhCC--CeEEEEecCCCHHHHHHHHHHHHHH
Confidence 467889999999999999999999866 444332 111 011222221 222 223455677777888777766
Q ss_pred --CCcEEEEecCCC
Q 019500 123 --ELDLVVCITEGI 134 (340)
Q Consensus 123 --Gvk~vvi~t~Gf 134 (340)
++..+| ...|.
T Consensus 100 ~g~iD~lV-nnAg~ 112 (272)
T 4dyv_A 100 FGRVDVLF-NNAGT 112 (272)
T ss_dssp HSCCCEEE-ECCCC
T ss_pred cCCCCEEE-ECCCC
Confidence 577755 55554
No 493
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=66.10 E-value=9.5 Score=37.86 Aligned_cols=88 Identities=15% Similarity=0.055 Sum_probs=53.2
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEE-eeCCCCCC-ceecCcccccCHHHhhccCCCcEEEEecChhhHHHHHHHHH
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVG-GVTPKKGG-TEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEAM 120 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~-~VnP~~~g-~~i~G~p~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ea~ 120 (340)
-.|+|+|. |++|+.+++.++.+|.++++ -++|...- ..-.|..+ .+++++.. ..|+++.+++...+.. -+...
T Consensus 248 KTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~v-v~LeElL~--~ADIVv~atgt~~lI~-~e~l~ 322 (464)
T 3n58_A 248 KVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEV-VTLDDAAS--TADIVVTTTGNKDVIT-IDHMR 322 (464)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEE-CCHHHHGG--GCSEEEECCSSSSSBC-HHHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCcee-ccHHHHHh--hCCEEEECCCCccccC-HHHHh
Confidence 35677799 99999999999999998552 24553200 01245543 47888876 4899998876443321 12222
Q ss_pred HcCCcEEEEecCCCC
Q 019500 121 EAELDLVVCITEGIP 135 (340)
Q Consensus 121 ~~Gvk~vvi~t~Gf~ 135 (340)
...-.++++-++.+.
T Consensus 323 ~MK~GAILINvGRgd 337 (464)
T 3n58_A 323 KMKDMCIVGNIGHFD 337 (464)
T ss_dssp HSCTTEEEEECSSST
T ss_pred cCCCCeEEEEcCCCC
Confidence 334445555455443
No 494
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=65.52 E-value=3.7 Score=39.03 Aligned_cols=32 Identities=22% Similarity=0.280 Sum_probs=26.0
Q ss_pred eEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCC
Q 019500 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPK 76 (340)
Q Consensus 43 iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~ 76 (340)
.+|+|+|+ |.+|...++.+...|.+++ .++++
T Consensus 167 ~~V~ViGa-G~iG~~~a~~l~~~Ga~V~-~~d~~ 198 (369)
T 2eez_A 167 ASVVILGG-GTVGTNAAKIALGMGAQVT-ILDVN 198 (369)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEE-EEECC
Confidence 45778899 9999999999999999855 55554
No 495
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=65.51 E-value=7.4 Score=35.96 Aligned_cols=83 Identities=17% Similarity=0.088 Sum_probs=48.7
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCC-eEEEeeCC--CCCCceecCc--------------ccc-cCHHHhhccCCCcEEEE
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGT-KMVGGVTP--KKGGTEHLGL--------------PVF-NTVAEAKAETKANASAI 105 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~-~vv~~VnP--~~~g~~i~G~--------------p~y-~sl~dip~~~~vDlavi 105 (340)
+|+|+||+|..|+.++..|...+. ..+..++. .. +...|. .+. .+.+++. +.|++++
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~--~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~---~aDvVi~ 76 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKE--DDTVGQAADTNHGIAYDSNTRVRQGGYEDTA---GSDVVVI 76 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGH--HHHHHHHHHHHHHHTTTCCCEEEECCGGGGT---TCSEEEE
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCCh--hhHHHHHHHHHHHHhhCCCcEEEeCCHHHhC---CCCEEEE
Confidence 678889889999998888877664 22335554 32 111111 111 1212222 5899999
Q ss_pred ecCh----------------hhHHHHHHHHHHcCCcEEEEec
Q 019500 106 YVPP----------------PFAAAAILEAMEAELDLVVCIT 131 (340)
Q Consensus 106 ~vp~----------------~~v~~~v~ea~~~Gvk~vvi~t 131 (340)
+... ..+.++++++.+.+.+..+++.
T Consensus 77 ~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~ 118 (303)
T 1o6z_A 77 TAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTT 118 (303)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEEC
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEe
Confidence 8642 2355677777777877655554
No 496
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=65.44 E-value=14 Score=35.46 Aligned_cols=29 Identities=17% Similarity=0.212 Sum_probs=21.6
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeC
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVT 74 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~Vn 74 (340)
+|+|+|. |..+..+++.+.+.|++++ .++
T Consensus 4 ~ilI~g~-g~~~~~~~~a~~~~G~~vv-~v~ 32 (451)
T 1ulz_A 4 KVLVANR-GEIAVRIIRACKELGIPTV-AIY 32 (451)
T ss_dssp SEEECCC-HHHHHHHHHHHHHHTCCEE-EEE
T ss_pred eEEEECC-cHHHHHHHHHHHHcCCeEE-EEe
Confidence 4777796 6667778888888999966 444
No 497
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=65.36 E-value=25 Score=30.83 Aligned_cols=81 Identities=9% Similarity=0.001 Sum_probs=48.8
Q ss_pred EEEEeCCCCC--cchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccC---CCc-EEEEecChhhHHHHHH
Q 019500 44 RVICQGITGK--NGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAET---KAN-ASAIYVPPPFAAAAIL 117 (340)
Q Consensus 44 aViVvGasgk--~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~---~vD-lavi~vp~~~v~~~v~ 117 (340)
.++|.|++|. +|..+++.|.+.|++++ .+..+. .. -..+.++.++. ++. +..+.+.++.+.++++
T Consensus 9 ~vlVTGasg~~GIG~~ia~~l~~~G~~V~-~~~r~~--~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 79 (266)
T 3oig_A 9 NIVVMGVANKRSIAWGIARSLHEAGARLI-FTYAGE--RL------EKSVHELAGTLDRNDSIILPCDVTNDAEIETCFA 79 (266)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHHTTCEEE-EEESSG--GG------HHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHH
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHCCCEEE-EecCch--HH------HHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHH
Confidence 5778899966 99999999999999966 343222 10 01122222210 122 2233556777888888
Q ss_pred HHHHc--CCcEEEEecCCC
Q 019500 118 EAMEA--ELDLVVCITEGI 134 (340)
Q Consensus 118 ea~~~--Gvk~vvi~t~Gf 134 (340)
++.+. ++..+| ...|+
T Consensus 80 ~~~~~~g~id~li-~~Ag~ 97 (266)
T 3oig_A 80 SIKEQVGVIHGIA-HCIAF 97 (266)
T ss_dssp HHHHHHSCCCEEE-ECCCC
T ss_pred HHHHHhCCeeEEE-Ecccc
Confidence 88766 577654 55554
No 498
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=65.34 E-value=4.7 Score=37.04 Aligned_cols=102 Identities=12% Similarity=0.066 Sum_probs=59.4
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCC-cee--cCcccccCHHHhhccCCCcEEEEecChhhH------
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH--LGLPVFNTVAEAKAETKANASAIYVPPPFA------ 112 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g-~~i--~G~p~y~sl~dip~~~~vDlavi~vp~~~v------ 112 (340)
..+++|+|+ |.+|+.++..|.+.|.+ +..+|++... +++ .|..+. +++++. +.|++|-++|....
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~-v~V~nRt~~ka~~la~~~~~~~-~~~~l~---~~DiVInaTp~Gm~~~~~l~ 191 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQ-VSVLNRSSRGLDFFQRLGCDCF-MEPPKS---AFDLIINATSASLHNELPLN 191 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCE-EEEECSSCTTHHHHHHHTCEEE-SSCCSS---CCSEEEECCTTCCCCSCSSC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHCCCeEe-cHHHhc---cCCEEEEcccCCCCCCCCCC
Confidence 446788899 99999999999999954 4488876521 111 122222 334443 48999999987532
Q ss_pred HHHHHHHHHcCCcEEEEecCCCChhhHHHHHHHHhccCCcEEE
Q 019500 113 AAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLV 155 (340)
Q Consensus 113 ~~~v~ea~~~Gvk~vvi~t~Gf~e~~~~~l~~~aar~~girvi 155 (340)
.+.+.+.+..+. .++-+... +++. +.+.+ ++.|++++
T Consensus 192 ~~~l~~~l~~~~-~v~D~vY~-P~T~---ll~~A-~~~G~~~~ 228 (269)
T 3phh_A 192 KEVLKGYFKEGK-LAYDLAYG-FLTP---FLSLA-KELKTPFQ 228 (269)
T ss_dssp HHHHHHHHHHCS-EEEESCCS-SCCH---HHHHH-HHTTCCEE
T ss_pred hHHHHhhCCCCC-EEEEeCCC-CchH---HHHHH-HHCcCEEE
Confidence 233333455443 33333333 2333 33333 56777765
No 499
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=65.23 E-value=17 Score=37.40 Aligned_cols=35 Identities=26% Similarity=0.435 Sum_probs=28.9
Q ss_pred CeEEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCC
Q 019500 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK 77 (340)
Q Consensus 42 ~iaViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~ 77 (340)
..+|+|+|+ |..|..++++|...|..-+..||+..
T Consensus 326 ~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 457888899 88999999999999987565777754
No 500
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=65.02 E-value=17 Score=32.27 Aligned_cols=72 Identities=21% Similarity=0.273 Sum_probs=45.3
Q ss_pred EEEEeCCCCCcchHHHHHHHHcCCeEEEeeCCCCCCceecCcccccCHHHhhccCCCcE-EEEecChhhHHHHHHHHHHc
Q 019500 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANA-SAIYVPPPFAAAAILEAMEA 122 (340)
Q Consensus 44 aViVvGasgk~G~~v~~~l~~~G~~vv~~VnP~~~g~~i~G~p~y~sl~dip~~~~vDl-avi~vp~~~v~~~v~ea~~~ 122 (340)
.++|.|+++.+|+.+++.|.+.|++++ .++.+. +. + . ++.. ..+.+.++.+.++++++.+.
T Consensus 10 ~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~r~~--~~--~-----------~--~~~~~~~Dl~~~~~v~~~~~~~~~~ 71 (264)
T 2dtx_A 10 VVIVTGASMGIGRAIAERFVDEGSKVI-DLSIHD--PG--E-----------A--KYDHIECDVTNPDQVKASIDHIFKE 71 (264)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEE-EEESSC--CC--S-----------C--SSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEE-EEecCc--cc--C-----------C--ceEEEEecCCCHHHHHHHHHHHHHH
Confidence 477889999999999999999999866 444332 11 1 0 1111 12234556666677766654
Q ss_pred --CCcEEEEecCCC
Q 019500 123 --ELDLVVCITEGI 134 (340)
Q Consensus 123 --Gvk~vvi~t~Gf 134 (340)
++..+| ...|+
T Consensus 72 ~g~iD~lv-~~Ag~ 84 (264)
T 2dtx_A 72 YGSISVLV-NNAGI 84 (264)
T ss_dssp HSCCCEEE-ECCCC
T ss_pred cCCCCEEE-ECCCC
Confidence 577755 45554
Done!