Query 019504
Match_columns 340
No_of_seqs 313 out of 2547
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 17:08:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019504.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019504hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qo6_A Protease DO-like 1, chl 100.0 1.3E-53 4.4E-58 398.5 24.8 313 11-340 7-321 (348)
2 3stj_A Protease DEGQ; serine p 100.0 3.2E-52 1.1E-56 387.7 25.1 289 22-340 14-322 (345)
3 4a8c_A Periplasmic PH-dependen 100.0 1.1E-50 3.8E-55 389.0 30.7 290 21-340 13-322 (436)
4 3pv2_A DEGQ; trypsin fold, PDZ 100.0 1.1E-50 3.7E-55 389.9 22.6 288 22-340 20-341 (451)
5 1te0_A Protease DEGS; two doma 100.0 1.8E-49 6.3E-54 366.3 23.4 286 22-340 10-303 (318)
6 4fln_A Protease DO-like 2, chl 100.0 8.1E-49 2.8E-53 379.8 28.8 281 29-340 45-345 (539)
7 1ky9_A Protease DO, DEGP, HTRA 100.0 5.7E-49 1.9E-53 377.6 19.3 289 22-340 14-345 (448)
8 1lcy_A HTRA2 serine protease; 100.0 2.2E-47 7.6E-52 353.2 22.3 283 19-340 13-312 (325)
9 3num_A Serine protease HTRA1; 100.0 7.2E-47 2.4E-51 351.0 21.8 288 14-340 7-310 (332)
10 1y8t_A Hypothetical protein RV 100.0 3.1E-46 1.1E-50 345.7 25.2 283 21-339 6-301 (324)
11 3sti_A Protease DEGQ; serine p 100.0 8.1E-39 2.8E-43 283.4 17.5 213 22-250 14-241 (245)
12 1l1j_A Heat shock protease HTR 100.0 1.2E-38 4.1E-43 281.7 15.7 219 21-253 4-239 (239)
13 3lgi_A Protease DEGS; stress-s 100.0 6.4E-37 2.2E-41 271.0 21.7 213 20-251 19-234 (237)
14 3tjo_A Serine protease HTRA1; 100.0 2.3E-35 7.9E-40 259.8 19.5 208 12-242 22-230 (231)
15 3k6y_A Serine protease, possib 100.0 3E-31 1E-35 234.6 20.3 194 24-247 34-231 (237)
16 2w5e_A Putative serine proteas 99.9 5.5E-24 1.9E-28 176.2 17.9 138 55-230 19-156 (163)
17 2as9_A Serine protease; trypsi 99.9 4.1E-23 1.4E-27 179.0 16.2 182 31-242 2-203 (210)
18 1agj_A Epidermolytic toxin A; 99.9 4.6E-22 1.6E-26 176.1 15.3 163 57-239 55-239 (242)
19 2h5c_A Alpha-lytic protease; s 99.9 5.7E-21 1.9E-25 163.5 16.9 158 58-237 17-191 (198)
20 2w7s_A Serine protease SPLA; h 99.8 4.8E-21 1.7E-25 164.6 11.3 159 57-240 22-197 (200)
21 2o8l_A V8 protease, taphylococ 99.8 1.5E-19 5.2E-24 162.8 19.1 162 57-243 34-212 (274)
22 1wcz_A Glutamyl endopeptidase; 99.8 3.1E-19 1.1E-23 160.2 17.3 162 57-243 34-212 (268)
23 2oua_A Serine protease, protei 99.8 4.5E-19 1.5E-23 150.5 17.0 155 58-237 15-182 (188)
24 2vid_A Serine protease SPLB; h 99.8 2.8E-19 9.5E-24 153.8 15.5 160 57-241 22-202 (204)
25 2qa9_E Streptogrisin-B; chymot 99.8 7.7E-19 2.6E-23 149.0 14.7 161 58-238 13-181 (185)
26 1hpg_A Glutamic acid specific 99.8 1.1E-18 3.7E-23 148.2 15.4 158 58-237 14-182 (187)
27 2ea3_A Chymotrypsin; celloulom 99.8 5.5E-18 1.9E-22 143.7 16.3 151 58-237 17-176 (189)
28 1qtf_A Exfoliative toxin B; se 99.8 3.9E-19 1.3E-23 157.7 9.5 138 57-215 48-205 (246)
29 2pfe_A Protease A, alkaline se 99.8 3.8E-18 1.3E-22 144.3 12.8 152 59-237 17-179 (186)
30 1mbm_A NSP4 proteinase, chymot 99.7 3.6E-17 1.2E-21 133.8 10.0 115 55-213 13-130 (198)
31 2sga_A Proteinase A; hydrolase 99.7 5.5E-17 1.9E-21 137.0 11.1 152 59-237 14-176 (181)
32 2l97_A HTRA, putative serine p 99.6 1.8E-18 6E-23 138.8 -4.4 104 222-340 2-115 (134)
33 3fan_A Non-structural protein; 99.6 3.5E-15 1.2E-19 124.2 7.0 120 55-216 28-147 (213)
34 3s69_A Thrombin-like enzyme de 99.5 4.7E-12 1.6E-16 110.7 19.3 172 58-244 25-227 (234)
35 4e7n_A Snake-venom thrombin-li 99.4 3.5E-12 1.2E-16 111.8 17.1 173 58-244 27-231 (238)
36 3s9c_A Vipera russelli protein 99.4 5E-12 1.7E-16 110.6 17.6 174 58-245 27-228 (234)
37 1pq7_A Trypsin; ultra-high res 99.4 3.2E-12 1.1E-16 111.2 16.2 170 58-239 25-222 (224)
38 2zch_P Prostate-specific antig 99.4 9.1E-12 3.1E-16 109.3 19.1 172 58-243 25-235 (237)
39 1fxy_A Coagulation factor XA-t 99.4 5.9E-12 2E-16 109.9 17.6 172 58-242 26-225 (228)
40 1p3c_A Glutamyl-endopeptidase; 99.4 1E-12 3.5E-17 113.6 12.1 167 57-241 30-213 (215)
41 2aiq_A Protein C activator; sn 99.4 6.1E-12 2.1E-16 110.0 17.0 173 58-244 24-224 (231)
42 1npm_A Neuropsin; serine prote 99.4 1.2E-11 3.9E-16 107.8 18.5 170 58-241 25-224 (225)
43 1fuj_A PR3, myeloblastin; hydr 99.4 1.8E-11 6.3E-16 106.1 19.7 166 58-241 28-220 (221)
44 1hj8_A Trypsin I; hydrolase, r 99.4 6.4E-12 2.2E-16 109.2 16.5 170 58-242 24-220 (222)
45 1a7s_A Heparin binding protein 99.4 2.2E-11 7.4E-16 106.0 19.9 168 58-244 25-220 (225)
46 4ag1_A Chymase; hydrolase-de n 99.4 3.9E-11 1.3E-15 104.3 21.4 167 58-242 29-224 (226)
47 2bdg_A Kallikrein-4; serine pr 99.4 1.2E-11 4.1E-16 107.5 17.9 169 58-242 25-222 (223)
48 2qxi_A Kallikrein-7; S1 pocket 99.4 1.2E-11 4.1E-16 107.6 17.7 168 58-243 25-222 (224)
49 1lo6_A Kallikrein 6, HK6; seri 99.4 1.3E-11 4.6E-16 107.3 17.8 171 58-242 25-221 (223)
50 2z7f_E Leukocyte elastase; ser 99.4 1.1E-11 3.9E-16 107.3 17.2 166 58-241 25-217 (218)
51 1ton_A Tonin; hydrolase(serine 99.4 3E-11 1E-15 105.7 19.9 172 58-243 23-233 (235)
52 2psx_A Kallikrein-5; zinc inhi 99.4 2.2E-11 7.7E-16 106.1 18.8 169 58-242 26-224 (227)
53 3mfj_A Cationic trypsin; serin 99.4 2E-11 6.8E-16 106.1 18.3 168 58-242 24-221 (223)
54 4i8h_A Cationic trypsin, beta- 99.4 1.7E-11 5.9E-16 106.4 17.8 170 58-242 24-221 (223)
55 1iau_A Granzyme B; hydrolase-h 99.4 4.8E-11 1.7E-15 103.9 20.2 166 58-242 28-225 (227)
56 1sgf_A 7S NGF, nerve growth fa 99.4 1.6E-11 5.5E-16 107.9 17.1 172 58-243 28-238 (240)
57 2xw9_A Complement factor D; im 99.4 2.3E-11 7.9E-16 106.0 18.0 173 58-241 25-227 (228)
58 1ao5_A Glandular kallikrein-13 99.4 2.9E-11 9.8E-16 106.0 18.6 169 58-242 25-234 (237)
59 1gvz_A Kallikrein-1E2; antigen 99.4 1.1E-11 3.7E-16 108.7 15.5 171 58-242 25-234 (237)
60 1spj_A Kallikrein 1; serine pr 99.4 2.4E-11 8.3E-16 106.5 17.6 171 58-242 25-235 (238)
61 1mza_A Pro-granzyme K; apoptos 99.4 2.3E-11 7.9E-16 106.9 17.2 174 58-242 27-235 (240)
62 1cgh_A Cathepsin G; inflammati 99.4 4.5E-11 1.6E-15 103.9 18.8 169 58-242 28-223 (224)
63 1bru_P Elastase, PPE; serine p 99.4 7.9E-11 2.7E-15 103.5 20.2 173 58-242 29-239 (241)
64 3rp2_A RAT MAST cell protease 99.4 1.1E-10 3.6E-15 101.3 20.8 166 58-241 29-223 (224)
65 1zyo_A Serine protease; beta-b 99.4 1.1E-11 3.7E-16 104.3 13.8 150 58-236 28-185 (191)
66 1azz_A Collagenase; complex (s 99.4 2.2E-11 7.7E-16 106.0 16.3 170 58-242 25-223 (226)
67 3h7t_A Group 3 allergen smipp- 99.4 3.1E-11 1.1E-15 105.3 17.2 174 58-244 25-231 (235)
68 3fzz_A Granzyme C; hydrolase, 99.4 6.1E-11 2.1E-15 103.1 18.7 166 58-242 29-226 (227)
69 1gvk_B Elastase 1, peptide inh 99.3 4.6E-11 1.6E-15 105.0 18.0 173 58-242 29-238 (240)
70 1orf_A Granzyme A; hydrolase-h 99.3 6.1E-11 2.1E-15 103.8 18.1 173 58-242 25-231 (234)
71 2zgc_A Granzyme M; serine prot 99.3 3.9E-11 1.3E-15 105.5 16.8 176 58-244 25-231 (240)
72 1eq9_A Chymotrypsin; FIRE ANT, 99.3 2.5E-11 8.4E-16 105.5 15.2 171 58-241 25-220 (222)
73 3tvj_B Mannan-binding lectin s 99.3 4.4E-11 1.5E-15 104.9 16.9 177 58-242 23-240 (242)
74 1elt_A Elastase; serine protei 99.3 5.1E-11 1.8E-15 104.4 16.9 171 58-240 29-235 (236)
75 1si5_H Scatter factor, hepatoc 99.3 1.4E-10 4.9E-15 101.8 18.4 176 58-244 24-229 (240)
76 2f91_A Hepatopancreas trypsin; 99.3 2.4E-10 8.1E-15 100.2 19.5 172 59-240 30-235 (237)
77 1euf_A Duodenase; serine prote 99.3 2.7E-10 9.3E-15 99.2 19.6 167 58-242 28-224 (227)
78 3gyl_B Prostasin; ENAC, zymoge 99.3 1.6E-10 5.4E-15 102.6 18.3 176 58-243 25-243 (261)
79 1aut_C Activated protein C; se 99.3 8.9E-11 3E-15 103.8 16.4 172 58-244 26-241 (250)
80 3mhw_U Urokinase-type plasmino 99.3 2E-10 6.7E-15 101.1 18.4 174 58-241 30-245 (247)
81 3beu_A Trypsin, SGT; beta shee 99.3 2.1E-10 7.3E-15 99.5 18.4 172 58-242 21-222 (224)
82 1m9u_A Earthworm fibrinolytic 99.3 5E-11 1.7E-15 104.7 14.3 172 58-239 28-239 (241)
83 2asu_B Hepatocyte growth facto 99.3 1.5E-10 5E-15 101.4 17.1 176 58-242 23-226 (234)
84 2oq5_A Transmembrane protease, 99.3 1.3E-09 4.5E-14 95.1 22.6 174 58-241 25-230 (232)
85 1ym0_A Fibrinotic enzyme compo 99.3 4.7E-10 1.6E-14 98.2 19.8 173 58-243 27-237 (238)
86 3gov_B MAsp-1; complement, ser 99.3 2.3E-10 8E-15 100.8 17.7 180 58-242 26-248 (251)
87 1pyt_D TC, PCPA-TC, chymotryps 99.3 2E-10 7E-15 101.5 17.3 172 58-241 42-249 (251)
88 3ncl_A Suppressor of tumorigen 99.3 1.9E-10 6.6E-15 100.8 16.9 179 58-241 26-239 (241)
89 2r0l_A Hepatocyte growth facto 99.3 3.7E-10 1.3E-14 99.5 18.8 176 58-243 24-240 (248)
90 1t8o_A Chymotrypsin A; chymotr 99.2 6.7E-10 2.3E-14 97.8 19.5 171 58-242 41-243 (245)
91 2jde_A Urokinase-type plasmino 99.2 6.4E-10 2.2E-14 99.6 19.5 175 58-242 53-269 (276)
92 2hlc_A Collagenase; serine pro 99.2 3E-10 1E-14 99.0 16.8 170 58-242 29-227 (230)
93 3h7o_A Group 3 allergen smipp- 99.2 1.4E-10 4.9E-15 100.7 14.4 172 58-243 27-227 (228)
94 1fon_A Procarboxypeptidase A-S 99.2 7.3E-11 2.5E-15 103.6 12.4 175 58-242 27-238 (240)
95 2any_A Kininogenin, plasma kal 99.2 5.3E-10 1.8E-14 98.2 17.8 175 58-243 28-237 (241)
96 2jkh_A Activated factor XA hea 99.2 8.5E-11 2.9E-15 103.3 12.2 173 58-243 26-234 (241)
97 1rtf_B (TC)-T-PA, two chain ti 99.2 1.2E-09 4.2E-14 96.4 19.7 174 58-241 31-250 (252)
98 4f4o_C Haptoglobin; globin fol 99.2 1.2E-10 4.1E-15 107.9 13.7 181 58-243 127-346 (347)
99 4dgj_A Enteropeptidase catalyt 99.2 1.7E-10 5.7E-15 100.9 13.8 173 58-240 25-233 (235)
100 1ddj_A Plasminogen; catalytic 99.2 8.4E-10 2.9E-14 97.3 18.3 176 58-243 43-246 (247)
101 2pzd_A Serine protease HTRA2; 99.2 4.7E-12 1.6E-16 98.1 3.2 81 244-340 1-91 (113)
102 1yc0_A Hepatocyte growth facto 99.2 5.8E-10 2E-14 100.4 17.2 176 58-243 59-275 (283)
103 2bz6_H Blood coagulation facto 99.2 4.4E-10 1.5E-14 99.5 15.7 177 58-244 25-242 (254)
104 2qy0_B Complement C1R subcompo 99.2 2.5E-10 8.4E-15 100.3 13.9 177 58-242 23-239 (242)
105 3bg8_A Coagulation factor XIA 99.2 2.9E-10 1E-14 99.7 14.2 174 58-242 28-236 (238)
106 3cp7_A Alkaline serine proteas 99.2 6.1E-10 2.1E-14 96.4 16.0 166 58-241 22-215 (218)
107 2p3w_A Probable serine proteas 99.2 9.5E-12 3.2E-16 96.2 3.9 81 244-340 1-91 (112)
108 1fiw_A Beta-acrosin heavy chai 99.2 2E-09 6.8E-14 97.3 19.8 175 58-242 31-249 (290)
109 2olg_A Pro-phenoloxidase activ 99.2 1.7E-09 5.9E-14 97.0 19.3 175 58-239 52-274 (278)
110 2wph_S Coagulation factor IXA 99.2 2E-10 6.9E-15 100.4 11.8 171 58-241 25-232 (235)
111 2f9n_A Alpha I tryptase; serin 99.2 7.3E-10 2.5E-14 97.5 15.3 176 58-242 28-242 (245)
112 3rm2_H Thrombin heavy chain; s 99.2 1.2E-09 3.9E-14 96.8 16.5 180 58-242 27-255 (259)
113 2vnt_A Urokinase-type plasmino 99.1 7.9E-09 2.7E-13 92.4 20.4 176 58-243 53-270 (276)
114 2bdy_A Thrombin; thrombin, com 99.1 2.5E-09 8.5E-14 96.6 17.1 180 58-242 57-285 (289)
115 1zjk_A Mannan-binding lectin s 99.1 1.4E-09 4.8E-14 102.9 16.1 177 58-242 184-401 (403)
116 1z8g_A Serine protease hepsin; 99.1 3.1E-09 1.1E-13 99.4 17.8 178 58-244 142-362 (372)
117 3f1s_B Vitamin K-dependent pro 99.1 1.2E-09 4E-14 98.5 13.9 171 58-244 78-278 (283)
118 1arb_A Achromobacter protease 99.1 4E-09 1.4E-13 93.9 16.7 30 190-219 188-217 (268)
119 2b9l_A Prophenoloxidase activa 99.1 2.4E-09 8.3E-14 100.8 15.2 179 57-244 162-385 (394)
120 3h5c_B Vitamin K-dependent pro 99.1 1.2E-09 4E-14 100.0 12.6 168 58-241 119-316 (317)
121 1md8_A C1R complement serine p 99.1 2.4E-09 8.1E-14 98.6 14.6 178 57-242 111-328 (329)
122 1elv_A Complement C1S componen 99.0 5.8E-09 2E-13 96.0 16.7 171 58-244 104-327 (333)
123 2xxl_A GRAM-positive specific 99.0 9.3E-09 3.2E-13 97.2 16.8 174 58-243 147-374 (408)
124 2i4s_A General secretion pathw 99.0 1.3E-10 4.5E-15 88.7 1.9 92 230-340 4-96 (105)
125 3mmg_A Nuclear inclusion prote 99.0 5.3E-08 1.8E-12 83.4 17.6 174 29-239 13-193 (241)
126 3nxp_A Prethrombin-1; alloster 98.9 5.3E-09 1.8E-13 99.6 12.5 180 58-242 192-420 (424)
127 1gpz_A Complement C1R componen 98.9 8.7E-09 3E-13 97.2 13.5 178 57-242 179-396 (399)
128 2vz5_A TAX1-binding protein 3; 98.9 1.7E-10 5.9E-15 92.6 1.5 85 242-340 31-124 (139)
129 2rcz_A Tight junction protein 98.9 2.2E-10 7.4E-15 82.9 0.6 70 256-340 7-81 (81)
130 2eaq_A LIM domain only protein 98.9 1.7E-10 5.9E-15 85.3 -0.1 59 268-340 28-89 (90)
131 1uit_A Human discs large 5 pro 98.9 2.3E-10 7.8E-15 89.1 0.3 83 241-339 7-100 (117)
132 3sfj_A TAX1-binding protein 3; 98.8 1.8E-09 6E-14 82.1 4.2 78 248-339 18-104 (104)
133 3cyy_A Tight junction protein 98.8 4.9E-10 1.7E-14 83.2 1.0 72 253-339 6-82 (92)
134 2xrc_A Human complement factor 98.8 3.6E-08 1.2E-12 97.1 14.5 172 58-242 346-556 (565)
135 4dur_A Plasminogen, serine pro 98.8 6.5E-08 2.2E-12 98.4 16.6 175 58-242 587-789 (791)
136 2pkt_A PDZ and LIM domain prot 98.8 1.4E-09 4.6E-14 80.6 2.9 58 268-340 27-86 (91)
137 2fcf_A Multiple PDZ domain pro 98.8 1.2E-09 4.1E-14 82.9 2.5 78 248-340 15-99 (103)
138 2pa1_A PDZ and LIM domain prot 98.8 1.4E-09 4.8E-14 79.8 2.4 58 268-340 26-85 (87)
139 3hrz_D Complement factor B; se 98.8 9.3E-09 3.2E-13 104.6 9.4 178 57-244 484-734 (741)
140 2kjp_A Uncharacterized protein 98.8 4.3E-10 1.5E-14 83.4 -0.8 58 268-340 1-59 (91)
141 2f83_A Coagulation factor XI; 98.8 4E-08 1.4E-12 97.9 13.1 173 58-240 415-621 (625)
142 2e7k_A Maguk P55 subfamily mem 98.8 2.2E-09 7.6E-14 79.5 2.5 68 249-339 18-87 (91)
143 1rrk_A Complement factor B; BB 98.8 1.5E-08 5E-13 98.3 8.7 179 58-246 243-494 (497)
144 2dls_A PDZ-rhogef, RHO guanine 98.8 3.2E-09 1.1E-13 79.0 3.1 58 268-339 29-86 (93)
145 1wh1_A KIAA1095 protein; PDZ d 98.8 2.3E-09 7.9E-14 84.3 2.2 59 268-340 48-107 (124)
146 2he4_A Na(+)/H(+) exchange reg 98.7 3.1E-09 1.1E-13 78.5 2.7 57 268-339 28-86 (90)
147 1lvm_A Catalytic domain of the 98.7 2E-07 6.7E-12 79.4 13.9 176 28-240 20-201 (229)
148 2zpm_A Regulator of sigma E pr 98.7 2.2E-09 7.5E-14 79.5 1.6 60 267-340 3-62 (91)
149 2vsp_A PDZ domain-containing p 98.7 1.7E-09 5.7E-14 80.2 0.9 57 268-339 27-85 (91)
150 3id1_A Regulator of sigma E pr 98.7 2.6E-09 9E-14 79.8 1.9 57 270-340 4-61 (95)
151 1vb7_A PDZ and LIM domain 2; P 98.7 1.9E-09 6.5E-14 80.4 1.1 58 268-340 30-89 (94)
152 2kl1_A YLBL protein; structure 98.7 1.7E-09 5.8E-14 80.7 0.8 59 267-340 4-63 (94)
153 2w4f_A Protein LAP4; structura 98.7 4.3E-09 1.5E-13 78.8 2.9 78 249-340 14-93 (97)
154 3i18_A LMO2051 protein; alpha- 98.7 3E-09 1E-13 80.3 2.1 58 268-340 7-65 (100)
155 2jre_A C60-1 PDZ domain peptid 98.7 1.9E-09 6.7E-14 82.5 0.9 59 267-340 43-104 (108)
156 2uzc_A Human pdlim5, PDZ and L 98.7 4.4E-09 1.5E-13 77.3 2.4 58 268-340 27-86 (88)
157 2i6v_A General secretion pathw 98.7 1.8E-09 6.2E-14 79.3 0.3 59 268-340 19-78 (87)
158 1uez_A KIAA1526 protein; PDZ d 98.7 4.6E-09 1.6E-13 79.3 2.5 59 268-340 35-93 (101)
159 3ngh_A PDZ domain-containing p 98.7 6.6E-09 2.2E-13 79.2 3.2 57 268-339 26-84 (106)
160 2v90_A PDZ domain-containing p 98.7 3.6E-09 1.2E-13 79.1 1.7 58 268-340 30-89 (96)
161 1ihj_A INAD; intermolecular di 98.7 4.7E-09 1.6E-13 78.8 2.3 60 268-340 37-97 (98)
162 2ego_A General receptor for ph 98.7 4.9E-09 1.7E-13 78.4 2.3 60 266-340 35-96 (96)
163 2qkv_A Inactivation-NO-after-p 98.7 5E-09 1.7E-13 78.4 2.2 58 268-339 31-90 (96)
164 1x5q_A LAP4 protein; PDZ domai 98.7 8.2E-09 2.8E-13 79.2 3.2 60 267-340 45-105 (110)
165 2ejy_A 55 kDa erythrocyte memb 98.7 4E-09 1.4E-13 79.0 1.2 58 268-340 36-96 (97)
166 2jil_A GRIP1 protein, glutamat 98.7 5.1E-09 1.8E-13 78.4 1.8 57 268-339 32-91 (97)
167 1rgw_A ZAsp protein; PDZ, cyph 98.7 7.8E-09 2.7E-13 75.4 2.5 60 268-340 25-84 (85)
168 2iwq_A Multiple PDZ domain pro 98.7 1.2E-08 4.1E-13 80.0 3.7 76 249-339 36-118 (123)
169 2vsv_A Rhophilin-2; scaffold p 98.6 8.4E-09 2.9E-13 79.0 2.6 58 268-339 44-103 (109)
170 3tsv_A Tight junction protein 98.6 1E-08 3.5E-13 80.5 3.1 58 268-339 51-111 (124)
171 2odp_A Complement C2; C3/C5 co 98.6 6.6E-08 2.2E-12 94.0 9.5 177 57-242 247-501 (509)
172 2jxo_A Ezrin-radixin-moesin-bi 98.6 2.2E-09 7.7E-14 80.6 -0.7 58 268-339 33-92 (98)
173 3cbz_A Dishevelled-2; PDZ doma 98.6 7E-09 2.4E-13 79.4 1.9 58 268-339 33-95 (108)
174 3e17_A Tight junction protein 98.6 3.3E-09 1.1E-13 78.1 0.0 57 268-339 21-80 (88)
175 2dmz_A INAD-like protein; PDZ 98.6 3.4E-09 1.2E-13 83.9 0.0 60 265-339 43-105 (129)
176 2kv8_A RGS12, regulator of G-p 98.6 6.5E-09 2.2E-13 75.5 1.5 58 268-340 23-82 (83)
177 3khf_A Microtubule-associated 98.6 7.9E-09 2.7E-13 77.7 1.9 57 268-339 34-92 (99)
178 1m5z_A GRIP, AMPA receptor int 98.6 1.2E-08 4.2E-13 75.4 2.7 59 268-339 32-90 (91)
179 1va8_A Maguk P55 subfamily mem 98.6 8.3E-09 2.8E-13 79.7 1.7 59 268-340 48-108 (113)
180 2eeh_A PDZ domain-containing p 98.6 1.7E-08 5.9E-13 76.0 3.4 73 249-340 22-94 (100)
181 2q3g_A PDZ and LIM domain prot 98.6 9.8E-09 3.3E-13 75.6 1.8 60 268-340 27-86 (89)
182 2i04_A Membrane-associated gua 98.6 1.1E-08 3.8E-13 74.6 2.1 57 268-338 25-85 (85)
183 3o46_A Maguk P55 subfamily mem 98.6 1.1E-08 3.8E-13 76.0 2.1 57 268-339 28-87 (93)
184 2la8_A Inactivation-NO-after-p 98.6 9.3E-09 3.2E-13 78.4 1.6 59 268-339 25-84 (106)
185 2vwr_A Ligand of NUMB protein 98.6 1.4E-08 4.9E-13 75.6 2.4 59 268-339 29-88 (95)
186 3r68_A Na(+)/H(+) exchange reg 98.6 1.5E-08 5E-13 75.5 2.4 57 268-339 29-87 (95)
187 2jik_A Synaptojanin-2 binding 98.6 1.5E-08 5E-13 76.5 2.3 59 268-339 37-96 (101)
188 1v5l_A PDZ and LIM domain 3; a 98.6 4.4E-09 1.5E-13 79.8 -0.7 57 268-339 29-87 (103)
189 2i1n_A Discs, large homolog 3; 98.6 1.2E-08 4.1E-13 77.1 1.7 59 268-339 34-93 (102)
190 1qau_A Neuronal nitric oxide s 98.6 1.9E-08 6.4E-13 77.4 2.9 60 268-340 26-87 (112)
191 2f5y_A Regulator of G-protein 98.6 2.2E-08 7.5E-13 74.0 3.1 59 268-339 24-82 (91)
192 2eeg_A PDZ and LIM domain prot 98.6 1.6E-08 5.6E-13 75.2 2.4 60 268-340 32-91 (94)
193 2byg_A Channel associated prot 98.6 9.9E-09 3.4E-13 79.7 1.2 59 268-339 54-113 (117)
194 1kwa_A Hcask/LIN-2 protein; PD 98.6 1.2E-08 4E-13 75.1 1.5 69 250-340 14-85 (88)
195 1y7n_A Amyloid beta A4 precurs 98.6 1.4E-08 4.9E-13 74.9 2.0 57 268-340 32-90 (90)
196 2awx_A Synapse associated prot 98.6 1.2E-08 4.3E-13 77.5 1.7 59 268-339 33-92 (105)
197 2yub_A LIMK-2, LIM domain kina 98.6 7E-09 2.4E-13 80.7 0.1 59 267-340 43-105 (118)
198 1q3o_A Shank1; PDZ, GKAP, pept 98.6 2.4E-08 8.1E-13 76.5 3.1 58 267-339 44-103 (109)
199 1n7e_A AMPA receptor interacti 98.6 2.4E-08 8.3E-13 74.7 3.0 58 268-340 30-90 (97)
200 2opg_A Multiple PDZ domain pro 98.6 2.9E-08 9.8E-13 74.4 3.4 59 268-339 30-89 (98)
201 1d5g_A Human phosphatase HPTP1 98.6 2.3E-08 8E-13 74.6 2.8 59 268-339 33-92 (96)
202 2fne_A Multiple PDZ domain pro 98.6 1.8E-08 6.1E-13 78.3 2.1 60 268-340 53-113 (117)
203 1ueq_A Membrane associated gua 98.6 2.5E-08 8.4E-13 78.2 2.8 58 268-339 44-105 (123)
204 2fe5_A Presynaptic protein SAP 98.6 2E-08 7E-13 74.6 2.2 60 268-340 33-93 (94)
205 2pka_B Kallikrein A; serine pr 98.6 6.4E-07 2.2E-11 72.7 11.4 124 115-242 6-149 (152)
206 1v5q_A GRIP1 homolog, glutamat 98.5 1.8E-08 6.2E-13 78.8 1.9 58 268-339 45-106 (122)
207 2qg1_A Multiple PDZ domain pro 98.5 2.6E-08 8.7E-13 73.8 2.6 59 268-339 29-88 (92)
208 1uep_A Membrane associated gua 98.5 1.1E-08 3.8E-13 77.5 0.6 58 268-339 34-95 (103)
209 2eno_A Synaptojanin-2-binding 98.5 2.6E-08 9E-13 77.6 2.7 60 267-339 46-106 (120)
210 1wi2_A Riken cDNA 2700099C19; 98.5 2.5E-08 8.4E-13 75.7 2.3 56 268-339 41-98 (104)
211 2koj_A Partitioning defective 98.5 3.3E-08 1.1E-12 75.9 3.0 59 268-340 39-101 (111)
212 2kom_A Partitioning defective 98.5 2.7E-08 9.3E-13 77.7 2.5 59 268-340 58-120 (121)
213 2q9v_A Membrane-associated gua 98.5 1.1E-08 3.6E-13 75.6 0.1 60 268-339 27-88 (90)
214 1w9e_A Syntenin 1; cell adhesi 98.5 1.9E-08 6.5E-13 83.1 1.6 50 248-316 15-64 (166)
215 2edp_A Fragment, shroom family 98.5 2.7E-08 9.1E-13 75.0 2.3 59 268-340 35-94 (100)
216 2edz_A PDZ domain-containing p 98.5 1.4E-08 4.7E-13 78.5 0.6 57 268-339 38-96 (114)
217 1ujd_A KIAA0559 protein; PDZ d 98.5 1.6E-08 5.4E-13 78.6 0.9 59 268-339 49-108 (117)
218 4amh_A Disks large homolog 1; 98.5 3.5E-08 1.2E-12 75.2 2.7 59 268-339 32-91 (106)
219 1uf1_A KIAA1526 protein; PDZ d 98.5 3.8E-08 1.3E-12 77.7 3.0 58 268-339 46-103 (128)
220 2o2t_A Multiple PDZ domain pro 98.5 1.6E-08 5.5E-13 78.5 0.9 94 230-340 5-110 (117)
221 1whd_A RGS3, regulator of G-pr 98.5 1.6E-08 5.4E-13 76.3 0.7 57 268-339 36-94 (100)
222 2h2b_A Tight junction protein 98.5 3.6E-08 1.2E-12 75.1 2.6 57 268-339 39-96 (107)
223 1wha_A KIAA0147 protein, scrib 98.5 2.4E-08 8.1E-13 75.9 1.6 59 268-339 38-97 (105)
224 2djt_A Unnamed protein product 98.5 2.7E-08 9.1E-13 75.5 1.5 60 268-340 38-98 (104)
225 2d90_A PDZ domain containing p 98.5 2E-08 6.9E-13 75.9 0.8 57 268-339 30-88 (102)
226 1q7x_A PDZ2B domain of PTP-BAS 98.5 4.8E-08 1.6E-12 74.6 2.8 59 268-339 42-101 (108)
227 3b76_A E3 ubiquitin-protein li 98.5 4E-08 1.4E-12 76.4 2.3 59 268-339 53-112 (118)
228 1nf3_C PAR-6B; semi-CRIB motif 98.5 3.9E-08 1.3E-12 77.6 2.3 58 268-340 65-125 (128)
229 3rle_A Golgi reassembly-stacki 98.5 5.8E-08 2E-12 83.3 3.5 60 266-339 14-75 (209)
230 3bpu_A Membrane-associated gua 98.5 4.3E-08 1.5E-12 71.9 2.3 57 268-340 27-86 (88)
231 1x5n_A Harmonin; PDZ domain, u 98.5 5.2E-08 1.8E-12 75.2 2.9 58 268-339 41-98 (114)
232 1wf7_A Enigma homologue protei 98.5 2E-08 6.9E-13 76.1 0.5 59 268-339 29-87 (103)
233 1g9o_A NHE-RF; PDZ domain, com 98.5 3.3E-08 1.1E-12 73.0 1.7 37 268-315 27-63 (91)
234 3qe1_A Sorting nexin-27, G pro 98.5 4.7E-08 1.6E-12 74.5 2.3 57 268-339 43-101 (107)
235 3qik_A Phosphatidylinositol 3, 98.5 1.6E-08 5.4E-13 75.5 -0.3 56 268-337 39-96 (101)
236 1wfg_A Regulating synaptic mem 98.5 4.3E-08 1.5E-12 77.7 2.1 58 268-339 65-126 (131)
237 2dm8_A INAD-like protein; PDZ 98.5 2.7E-08 9.2E-13 77.0 0.9 59 268-339 43-102 (116)
238 1vae_A Rhophilin 2, rhophilin, 98.5 1.9E-08 6.6E-13 77.3 -0.1 57 268-338 36-94 (111)
239 1v62_A KIAA1719 protein; struc 98.5 2.9E-08 1E-12 77.0 0.9 56 269-339 43-101 (117)
240 2r4h_A Membrane-associated gua 98.5 4.9E-08 1.7E-12 75.2 2.1 59 268-339 49-108 (112)
241 1x6d_A Interleukin-16; PDZ dom 98.5 3.2E-08 1.1E-12 77.0 1.0 60 268-339 42-102 (119)
242 3rle_A Golgi reassembly-stacki 98.5 8.7E-08 3E-12 82.2 3.9 57 268-339 112-169 (209)
243 1yph_C Chymotrypsin A, chain B 98.5 1.4E-06 4.7E-11 68.8 10.6 86 58-154 26-127 (131)
244 3kzd_A TIAM-1, T-lymphoma inva 98.4 5.3E-08 1.8E-12 72.1 2.1 36 268-314 35-70 (94)
245 2hga_A Conserved protein MTH13 98.4 4.9E-08 1.7E-12 76.6 2.0 56 268-339 25-81 (125)
246 2g5m_B Neurabin-2; spinophilin 98.4 4.1E-08 1.4E-12 75.6 1.5 60 268-340 35-95 (113)
247 2yt7_A Amyloid beta A4 precurs 98.4 3.1E-08 1.1E-12 74.8 0.7 58 268-339 37-98 (101)
248 2iwn_A Multiple PDZ domain pro 98.4 5.1E-08 1.7E-12 72.8 1.9 60 267-339 32-92 (97)
249 3axa_A Afadin, nectin-3, prote 98.4 4.9E-08 1.7E-12 74.3 1.9 60 268-340 38-98 (106)
250 1qav_A Alpha-1 syntrophin (res 98.4 7E-08 2.4E-12 71.1 2.5 58 268-338 30-88 (90)
251 3i4w_A Disks large homolog 4; 98.4 9.3E-08 3.2E-12 72.4 3.2 59 268-339 35-94 (104)
252 1um1_A KIAA1849 protein, RSGI 98.4 4.3E-08 1.5E-12 75.1 1.3 59 268-339 36-95 (110)
253 1mfg_A ERB-B2 interacting prot 98.4 7E-08 2.4E-12 71.8 2.2 58 268-339 35-92 (95)
254 1uhp_A Hypothetical protein KI 98.4 1.1E-07 3.7E-12 72.5 3.3 60 267-339 40-100 (107)
255 1tp5_A Presynaptic density pro 98.4 1.1E-07 3.6E-12 74.0 3.2 58 268-339 38-97 (119)
256 1wf8_A Neurabin-I; PDZ domain, 98.4 5.8E-08 2E-12 74.0 1.6 59 268-339 40-99 (107)
257 3gsl_A Disks large homolog 4; 98.4 6E-08 2E-12 82.0 1.8 58 268-340 130-190 (196)
258 2kjd_A Sodium/hydrogen exchang 98.4 2.9E-08 9.9E-13 78.3 -0.2 58 268-339 33-92 (128)
259 3nfk_A Tyrosine-protein phosph 98.4 7.7E-08 2.6E-12 73.3 2.2 60 268-339 43-107 (107)
260 2gzv_A PRKCA-binding protein; 98.4 6.6E-08 2.3E-12 74.7 1.8 56 268-338 50-108 (114)
261 2dkr_A LIN-7 homolog B; LIN-7B 98.4 5.2E-08 1.8E-12 72.2 1.1 59 268-339 30-89 (93)
262 1b8q_A Protein (neuronal nitri 98.4 3.4E-08 1.1E-12 77.8 0.0 60 268-340 33-94 (127)
263 2db5_A INAD-like protein; PDZ 98.4 3.9E-08 1.3E-12 77.6 0.3 57 268-339 54-114 (128)
264 1wfv_A Membrane associated gua 98.4 3.2E-08 1.1E-12 74.8 -0.2 60 268-340 36-96 (103)
265 1wif_A RSGI RUH-020, riken cDN 98.4 2.7E-08 9.3E-13 78.1 -0.7 58 268-339 49-110 (126)
266 2iwo_A Multiple PDZ domain pro 98.4 8.6E-08 2.9E-12 74.7 2.0 60 268-340 53-113 (120)
267 2d92_A INAD-like protein; PDZ 98.4 4.3E-08 1.5E-12 74.9 0.2 60 268-339 44-104 (108)
268 2z17_A Pleckstrin homology SEC 98.4 3E-08 1E-12 75.3 -0.7 47 267-327 47-95 (104)
269 2d8i_A T-cell lymphoma invasio 98.4 5.6E-08 1.9E-12 75.0 0.8 55 268-339 44-100 (114)
270 1uew_A Membrane associated gua 98.4 6.2E-08 2.1E-12 74.8 1.0 57 268-339 43-102 (114)
271 2kpk_A Membrane-associated gua 98.4 7.3E-08 2.5E-12 76.1 1.3 58 268-339 43-104 (129)
272 3l4f_D SH3 and multiple ankyri 98.4 9.4E-08 3.2E-12 75.8 1.8 59 268-339 65-123 (132)
273 2dlu_A INAD-like protein; PDZ 98.4 7.1E-08 2.4E-12 74.0 1.0 59 268-339 38-97 (111)
274 2daz_A INAD-like protein; PDZ 98.4 7.6E-08 2.6E-12 75.5 1.1 59 268-339 51-110 (124)
275 2yuy_A RHO GTPase activating p 98.4 2.1E-08 7.3E-13 78.9 -2.1 57 268-339 61-119 (126)
276 3gsl_A Disks large homolog 4; 98.4 1.2E-07 4E-12 80.1 2.3 59 267-339 34-94 (196)
277 1wg6_A Hypothetical protein (r 98.4 5.4E-08 1.8E-12 76.7 0.2 58 268-339 55-121 (127)
278 1ujv_A Membrane associated gua 98.3 1.4E-07 4.7E-12 70.5 2.1 57 268-340 32-91 (96)
279 2eei_A PDZ domain-containing p 98.3 6.4E-08 2.2E-12 73.6 0.2 59 268-339 32-90 (106)
280 1wi4_A Synip, syntaxin binding 98.3 7.9E-08 2.7E-12 73.6 0.7 61 268-340 41-105 (109)
281 2edv_A FERM and PDZ domain-con 98.3 7.6E-08 2.6E-12 71.9 0.3 58 268-339 31-88 (96)
282 1n7t_A 99-MER peptide of densi 98.3 1E-07 3.6E-12 72.0 0.6 58 268-339 43-100 (103)
283 3hpk_A Protein interacting wit 98.3 1.9E-07 6.4E-12 73.3 2.0 58 268-338 45-103 (125)
284 2ehr_A INAD-like protein; PDZ 98.3 2E-07 6.8E-12 72.2 1.5 59 268-339 50-109 (117)
285 1uju_A Scribble; PDZ domain, c 98.3 4.4E-08 1.5E-12 75.2 -2.4 59 268-339 44-103 (111)
286 2dc2_A GOPC, golgi associated 98.3 2.4E-07 8.1E-12 70.1 1.7 59 268-339 35-94 (103)
287 4fgm_A Aminopeptidase N family 98.2 4.1E-07 1.4E-11 89.8 3.4 58 268-340 496-554 (597)
288 2lob_A Golgi-associated PDZ an 97.6 1.4E-07 4.7E-12 72.6 0.0 55 268-337 53-110 (112)
289 3egg_C Spinophilin; PP1, serin 98.2 3E-07 1E-11 76.1 1.9 59 268-339 111-170 (170)
290 3k1r_A Harmonin; protein-prote 98.2 3.3E-07 1.1E-11 77.5 2.2 57 268-340 110-168 (192)
291 2cs5_A Tyrosine-protein phosph 98.2 1.8E-07 6E-12 72.8 0.3 60 268-339 41-105 (119)
292 1r6j_A Syntenin 1; PDZ, membra 98.2 3.5E-07 1.2E-11 66.0 1.8 56 271-339 26-81 (82)
293 1p1d_A PDZ45, glutamate recept 98.2 3.7E-07 1.3E-11 77.4 2.2 58 268-340 135-195 (196)
294 1fc6_A Photosystem II D1 prote 98.2 8.9E-07 3E-11 83.1 4.8 74 247-339 83-158 (388)
295 3r0h_A INAD, inactivation-NO-a 98.2 4.5E-07 1.5E-11 77.3 2.4 59 268-339 45-107 (206)
296 1p1d_A PDZ45, glutamate recept 98.2 2.7E-07 9.1E-12 78.3 0.9 58 268-339 36-97 (196)
297 4e34_A Golgi-associated PDZ an 98.2 1.5E-06 5.2E-11 63.3 4.7 57 268-337 28-85 (87)
298 1i16_A Interleukin 16, LCF; cy 98.2 1.9E-07 6.4E-12 73.8 -0.4 60 268-339 57-117 (130)
299 1um7_A Synapse-associated prot 98.2 2.8E-07 9.5E-12 70.8 0.5 59 268-339 39-98 (113)
300 2qt5_A Glutamate receptor-inte 98.1 4.3E-07 1.5E-11 77.1 1.3 57 268-339 135-194 (200)
301 4a8c_A Periplasmic PH-dependen 98.1 9.5E-07 3.2E-11 84.2 3.6 58 268-340 363-420 (436)
302 3pv2_A DEGQ; trypsin fold, PDZ 98.1 8.3E-07 2.8E-11 84.9 2.6 58 268-340 386-443 (451)
303 1v6b_A Harmonin isoform A1; st 98.1 7.4E-07 2.5E-11 69.1 1.8 57 269-339 44-106 (118)
304 2qbw_A PDZ-fibronectin fusion 98.1 1E-06 3.4E-11 74.5 2.7 57 268-338 24-80 (195)
305 3r0h_A INAD, inactivation-NO-a 98.1 7.7E-07 2.6E-11 75.8 1.5 59 268-339 136-195 (206)
306 2qt5_A Glutamate receptor-inte 98.1 1.2E-06 4.2E-11 74.3 2.7 57 268-339 33-92 (200)
307 2csj_A TJP2 protein; PDZ domai 98.1 5.6E-07 1.9E-11 69.7 0.3 58 268-339 46-103 (117)
308 3tsz_A Tight junction protein 98.0 1.9E-06 6.6E-11 80.7 2.1 58 268-339 31-91 (391)
309 2krg_A Na(+)/H(+) exchange reg 98.0 4.9E-07 1.7E-11 77.7 -2.0 56 268-338 33-91 (216)
310 1ufx_A KIAA1526 protein; PDZ d 97.9 1E-06 3.5E-11 66.6 -0.2 35 269-314 33-68 (103)
311 3k50_A Putative S41 protease; 97.9 3.2E-06 1.1E-10 79.4 2.9 55 269-339 91-145 (403)
312 3soe_A Membrane-associated gua 97.9 4.7E-06 1.6E-10 63.7 3.0 57 268-340 34-93 (113)
313 1ky9_A Protease DO, DEGP, HTRA 97.9 1.8E-06 6.2E-11 82.5 0.0 58 268-340 383-440 (448)
314 3shw_A Tight junction protein 97.8 4.9E-06 1.7E-10 79.3 2.0 58 268-339 23-83 (468)
315 1z87_A Alpha-1-syntrophin; pro 97.8 3.9E-06 1.3E-10 74.1 0.8 59 268-339 103-162 (263)
316 3suz_A Amyloid beta A4 precurs 97.8 9E-06 3.1E-10 76.2 3.0 60 268-339 232-293 (388)
317 3zve_A 3C protease; hydrolase, 97.7 0.002 7E-08 53.6 16.1 144 59-230 25-174 (190)
318 3qzr_A 3C protein; chymotrypsi 97.6 0.0084 2.9E-07 49.5 18.0 144 59-230 29-178 (187)
319 1k32_A Tricorn protease; prote 97.6 4.2E-05 1.4E-09 80.6 5.2 57 268-339 748-814 (1045)
320 2xkx_A Disks large homolog 4; 97.6 3E-05 1E-09 78.4 3.4 59 268-339 184-243 (721)
321 2xkx_A Disks large homolog 4; 97.6 3.8E-05 1.3E-09 77.7 4.1 59 268-339 89-148 (721)
322 2b0f_A Picornain 3C (protease 97.6 0.0039 1.3E-07 51.4 15.5 143 59-230 25-173 (182)
323 3q3y_A HEVB EV93 3C protease; 97.5 0.019 6.4E-07 47.4 18.8 145 59-230 27-176 (191)
324 4dcd_A Protease 3C, genome pol 97.5 0.012 4.1E-07 48.7 17.7 144 59-230 32-181 (190)
325 3gge_A PDZ domain-containing p 97.4 0.00022 7.4E-09 52.5 5.4 38 268-315 28-65 (95)
326 2bhg_A Foot-and-mouth disease 97.4 0.00078 2.7E-08 57.2 9.2 157 59-238 32-205 (209)
327 1w9e_A Syntenin 1; cell adhesi 97.3 0.00019 6.5E-09 58.7 5.0 36 269-316 109-144 (166)
328 2hal_A Hepatitis A protease 3C 97.2 0.0098 3.3E-07 50.5 13.9 177 25-230 4-204 (212)
329 3suz_A Amyloid beta A4 precurs 97.1 7.1E-05 2.4E-09 70.0 0.0 56 269-339 316-373 (388)
330 4fln_A Protease DO-like 2, chl 97.0 0.00033 1.1E-08 67.9 3.8 46 268-327 415-460 (539)
331 1cqq_A Type 2 rhinovirus 3C pr 97.0 0.062 2.1E-06 44.2 16.8 144 59-230 25-174 (180)
332 2ijd_1 Picornain 3C, RNA-direc 96.3 0.1 3.4E-06 51.9 15.6 134 59-214 25-164 (644)
333 2pka_A Kallikrein A; serine pr 95.8 0.027 9.4E-07 39.5 6.9 21 58-79 25-45 (80)
334 1yph_E Chymotrypsin A, chain C 95.7 0.023 7.9E-07 41.7 6.1 52 190-242 41-95 (97)
335 4ash_A NS6 protease; hydrolase 95.2 0.043 1.5E-06 42.9 6.3 143 50-216 8-164 (185)
336 2fyq_A Chymotrypsin-like cyste 94.3 0.091 3.1E-06 41.3 6.1 138 55-216 24-175 (194)
337 1wxr_A Haemoglobin protease; h 93.5 0.33 1.1E-05 50.1 10.0 80 57-154 56-144 (1048)
338 2fp7_B Serine protease NS3; fl 93.1 0.05 1.7E-06 43.3 2.7 115 58-214 21-138 (172)
339 2fom_B Polyprotein; flavivirus 92.7 0.06 2.1E-06 43.4 2.7 135 28-214 16-153 (185)
340 3e90_B NS3 protease; trypsin-l 92.7 0.067 2.3E-06 43.4 3.0 135 29-215 21-158 (198)
341 3u1j_B Serine protease NS3; se 92.5 0.075 2.5E-06 43.0 3.0 136 29-216 26-164 (191)
342 2ggv_B NS3, non-structural pro 92.3 0.11 3.7E-06 41.8 3.7 135 29-215 16-153 (185)
343 3lkw_A Fusion protein of nonst 91.7 0.1 3.5E-06 43.6 3.0 115 59-215 87-204 (236)
344 1vcp_A Semliki forest virus ca 91.1 0.29 9.8E-06 36.7 4.5 30 188-217 93-122 (149)
345 2yew_A Capsid protein, coat pr 90.8 0.26 8.8E-06 41.0 4.5 30 188-217 197-226 (253)
346 4agk_A Capsid protein, coat pr 90.8 0.22 7.5E-06 37.8 3.7 30 188-217 101-130 (158)
347 1svp_A Sindbis virus capsid pr 90.7 0.31 1.1E-05 37.1 4.5 29 189-217 103-131 (161)
348 3su6_A NS3 protease, NS4A prot 90.4 0.38 1.3E-05 38.8 5.0 43 191-234 155-197 (203)
349 1ep5_B Capsid protein C, coat 90.2 0.45 1.5E-05 36.1 4.9 31 187-217 99-129 (157)
350 1kxf_A Sindbis virus capsid pr 89.5 0.32 1.1E-05 40.8 4.1 30 188-217 207-236 (264)
351 2o8m_A Protease; NS3, NS4A, vi 72.3 6.6 0.00023 32.0 5.5 44 192-236 146-189 (200)
352 1i4k_A Putative snRNP SM-like 63.2 19 0.00067 24.4 5.9 60 93-156 16-75 (77)
353 1th7_A SnRNP-2, small nuclear 61.3 27 0.00093 24.0 6.4 57 93-153 21-77 (81)
354 1d3b_B Protein (small nuclear 58.6 17 0.00057 25.7 5.0 32 93-126 16-47 (91)
355 1h64_1 SnRNP SM-like protein; 57.4 19 0.00066 24.3 5.0 33 93-127 16-48 (75)
356 3s6n_G Small nuclear ribonucle 57.1 20 0.00069 24.4 5.0 33 93-127 16-48 (76)
357 4emk_B U6 snRNA-associated SM- 53.5 23 0.00079 24.0 4.8 32 93-126 16-47 (75)
358 1mgq_A SM-like protein; LSM, R 53.4 24 0.00082 24.4 5.0 33 93-127 27-59 (83)
359 1b34_A Protein (small nuclear 53.3 55 0.0019 24.4 7.3 60 93-156 14-73 (119)
360 4emk_C U6 snRNA-associated SM- 52.0 26 0.00088 26.0 5.2 32 93-126 35-66 (113)
361 4emk_A U6 snRNA-associated SM- 51.5 26 0.00089 25.1 5.0 32 93-126 32-63 (94)
362 1d3b_A Protein (small nuclear 51.4 31 0.0011 23.4 5.2 33 93-127 17-49 (75)
363 4emg_A Probable U6 snRNA-assoc 51.3 26 0.00091 24.9 5.0 32 93-126 21-52 (93)
364 1ljo_A Archaeal SM-like protei 51.2 32 0.0011 23.4 5.3 32 93-126 17-49 (77)
365 3s6n_F Small nuclear ribonucle 51.1 30 0.001 24.2 5.2 59 93-155 18-76 (86)
366 4esy_A CBS domain containing m 50.2 10 0.00035 29.8 2.9 21 193-213 47-67 (170)
367 3bw1_A SMX4 protein, U6 snRNA- 49.7 24 0.00081 25.3 4.6 32 93-126 22-53 (96)
368 1i8f_A Putative snRNP SM-like 49.7 23 0.00078 24.4 4.3 32 93-126 23-54 (81)
369 1b34_B Protein (small nuclear 49.4 29 0.001 25.9 5.2 33 93-127 41-73 (118)
370 1y96_A Gemin6, SIP2, GEM-assoc 43.6 68 0.0023 22.5 5.9 31 93-125 19-50 (86)
371 3by8_A Sensor protein DCUS; hi 43.1 24 0.00082 26.9 4.0 29 198-239 111-139 (142)
372 4emh_A Probable U6 snRNA-assoc 42.4 46 0.0016 24.3 5.2 60 93-156 28-88 (105)
373 3k6e_A CBS domain protein; str 42.2 16 0.00055 28.4 2.9 22 192-213 45-66 (156)
374 3pgw_B SM B; protein-RNA compl 41.9 29 0.001 29.2 4.5 32 93-126 16-47 (231)
375 1n9r_A SMF, small nuclear ribo 40.7 42 0.0014 23.8 4.7 32 93-126 33-65 (93)
376 3d3r_A Hydrogenase assembly ch 38.3 52 0.0018 23.9 4.8 45 106-153 26-72 (103)
377 1z8r_A Coxsackievirus B4 polyp 38.1 59 0.002 25.7 5.4 31 183-214 113-143 (166)
378 3k6e_A CBS domain protein; str 36.7 19 0.00065 28.0 2.5 16 198-213 118-133 (156)
379 2fwk_A U6 snRNA-associated SM- 36.2 28 0.00095 26.1 3.2 31 93-125 40-70 (121)
380 3nqr_A Magnesium and cobalt ef 35.8 20 0.0007 26.3 2.5 21 193-213 97-117 (127)
381 3lfr_A Putative metal ION tran 34.7 22 0.00074 26.6 2.5 20 194-213 99-118 (136)
382 3hf7_A Uncharacterized CBS-dom 34.0 23 0.00078 26.3 2.5 20 194-213 99-118 (130)
383 3gby_A Uncharacterized protein 33.7 23 0.0008 26.0 2.5 20 194-213 98-117 (128)
384 2hrv_A 2A cysteine proteinase; 33.5 57 0.002 25.1 4.5 30 184-214 94-123 (142)
385 3i8n_A Uncharacterized protein 33.5 23 0.0008 26.1 2.5 20 194-213 101-120 (130)
386 2y9a_D Small nuclear ribonucle 33.2 1.5E+02 0.0053 22.2 7.1 60 93-156 17-76 (126)
387 1m5q_A SMAP3, small nuclear ri 32.9 75 0.0026 24.1 5.2 56 93-156 12-67 (130)
388 3jtf_A Magnesium and cobalt ef 32.6 23 0.0008 26.1 2.3 21 193-213 97-117 (129)
389 3kpb_A Uncharacterized protein 30.0 30 0.001 24.9 2.5 21 193-213 91-111 (122)
390 3oi8_A Uncharacterized protein 29.9 28 0.00097 26.7 2.5 21 193-213 131-151 (156)
391 3lv9_A Putative transporter; C 29.9 29 0.00098 26.2 2.5 20 194-213 117-136 (148)
392 3oco_A Hemolysin-like protein 29.4 27 0.00091 26.7 2.2 21 193-213 114-134 (153)
393 1p0z_A Sensor kinase CITA; tra 29.1 39 0.0013 25.2 3.1 19 198-216 106-124 (131)
394 3ghd_A A cystathionine beta-sy 28.6 36 0.0012 22.5 2.5 20 193-213 21-40 (70)
395 2eqj_A Metal-response element- 28.6 1.3E+02 0.0044 19.9 5.4 33 93-127 19-51 (66)
396 3lqn_A CBS domain protein; csg 28.1 32 0.0011 25.9 2.5 16 198-213 119-134 (150)
397 3kxr_A Magnesium transporter, 27.7 32 0.0011 28.1 2.5 21 193-213 145-165 (205)
398 2nyc_A Nuclear protein SNF4; b 27.4 34 0.0012 25.3 2.5 20 194-213 113-132 (144)
399 2ef7_A Hypothetical protein ST 26.6 36 0.0012 24.9 2.5 20 194-213 97-116 (133)
400 3ctu_A CBS domain protein; str 26.3 37 0.0013 25.8 2.5 17 197-213 117-133 (156)
401 3s6n_E Small nuclear ribonucle 25.9 95 0.0032 21.9 4.4 31 94-126 33-63 (92)
402 3lhh_A CBS domain protein; str 25.6 37 0.0013 26.5 2.5 14 199-212 141-154 (172)
403 1v84_A Galactosylgalactosylxyl 25.6 53 0.0018 28.1 3.5 37 198-234 148-185 (253)
404 2rih_A Conserved protein with 25.6 38 0.0013 25.2 2.5 20 194-213 100-119 (141)
405 3ctu_A CBS domain protein; str 25.0 47 0.0016 25.2 3.0 22 192-213 45-66 (156)
406 3lqn_A CBS domain protein; csg 24.9 45 0.0016 25.0 2.8 21 193-213 46-66 (150)
407 2uv4_A 5'-AMP-activated protei 24.8 46 0.0016 25.1 2.9 21 193-213 50-70 (152)
408 3sl7_A CBS domain-containing p 24.8 39 0.0013 26.2 2.5 14 199-212 133-146 (180)
409 3fio_A A cystathionine beta-sy 24.5 47 0.0016 21.1 2.5 20 193-213 21-40 (70)
410 3ocm_A Putative membrane prote 24.0 37 0.0013 26.7 2.2 14 199-212 134-147 (173)
411 4dah_A Sporulation kinase D; a 23.3 1E+02 0.0036 24.6 5.0 31 198-241 130-160 (217)
412 4hcz_A PHD finger protein 1; p 23.2 1.5E+02 0.0053 18.9 6.3 34 93-128 9-42 (58)
413 2o16_A Acetoin utilization pro 23.0 51 0.0018 25.2 2.8 21 193-213 34-54 (160)
414 1yav_A Hypothetical protein BS 22.8 52 0.0018 25.0 2.8 21 193-213 45-65 (159)
415 3o8b_A HCV NS3 protease/helica 22.8 93 0.0032 30.7 5.1 44 190-234 168-211 (666)
416 2yzi_A Hypothetical protein PH 22.6 54 0.0018 24.1 2.8 21 193-213 36-56 (138)
417 1o50_A CBS domain-containing p 22.5 47 0.0016 25.3 2.5 20 194-213 125-144 (157)
418 2emq_A Hypothetical conserved 22.0 57 0.0019 24.6 2.9 21 193-213 42-62 (157)
419 3lv9_A Putative transporter; C 21.4 61 0.0021 24.3 2.9 21 193-213 54-75 (148)
420 3l2b_A Probable manganase-depe 21.3 48 0.0017 27.5 2.5 21 193-213 215-235 (245)
421 4gqw_A CBS domain-containing p 21.3 62 0.0021 24.0 2.9 21 193-213 36-56 (152)
422 2l32_A Small archaeal modifier 20.8 44 0.0015 22.5 1.7 29 298-338 33-61 (74)
423 2p9m_A Hypothetical protein MJ 20.8 62 0.0021 23.7 2.8 21 193-213 37-57 (138)
424 3k2v_A Putative D-arabinose 5- 20.4 64 0.0022 24.2 2.8 21 193-213 59-79 (149)
425 3lfr_A Putative metal ION tran 20.4 64 0.0022 23.8 2.8 21 193-213 34-55 (136)
426 3dor_A Protein CT_858, CPAF; m 20.4 75 0.0026 30.7 3.8 19 298-316 111-129 (583)
No 1
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=1.3e-53 Score=398.54 Aligned_cols=313 Identities=49% Similarity=0.729 Sum_probs=261.8
Q ss_pred CCCCCCCcchhHHHHHHHHhCCCeEEEEeeeeccccccCCcccccCCceEEEEEcCCCEEEeCccccCCCCCCCCCCCcc
Q 019504 11 FPSGQLLPNEERIAQLFEKNTYSVVNIFDVTLRPTLNVTGLVEIPEGNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQV 90 (340)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~svV~I~~~~~~~~~~~~~~~~~~~~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~ 90 (340)
.++..+.+.+....++++++.+|||.|.+.....+....+....+.+.||||+|+++||||||+||+.+..
T Consensus 7 ~~~~~~~~~e~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~~g~GSG~iI~~~G~IlT~aHvv~~~~--------- 77 (348)
T 3qo6_A 7 STPKKLQTDELATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWDKQGHIVTNYHVIRGAS--------- 77 (348)
T ss_dssp --CCCCCHHHHHHHHHHHHHGGGEEEEEEEEEEECSSSCCEEEEEEEEEEEEEEETTTEEEECHHHHTTCS---------
T ss_pred cCccccCcchhHHHHHHHHhCCCEEEEEEEeecccccccccccccCceEEEEEEeCCCEEEECHHHhCCCc---------
Confidence 34556778888999999999999999987655443222222233457899999999999999999999875
Q ss_pred EEEEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecCCCCccceeecCCCCCCCCCEEEEEecCCCCCCceeEEEEeeec
Q 019504 91 VARVNILASDGVQKNFEGKLVGADRAKDLAVLKIEASEDLLKPINVGQSSFLKVGQQCLAIGNPFGFDHTLTVGVISGLN 170 (340)
Q Consensus 91 ~~~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~~~~~~G~vs~~~ 170 (340)
.+.|.+.+++ .++++++..|+.+|||||+++.+...++++.|+++..++.|+.|+++|||++...+++.|+++.+.
T Consensus 78 --~i~V~~~~g~--~~~a~~v~~d~~~DlAlLkl~~~~~~~~~i~l~~s~~~~~G~~v~~iG~p~g~~~~~~~g~vs~~~ 153 (348)
T 3qo6_A 78 --DLRVTLADQT--TFDAKVVGFDQDKDVAVLRIDAPKNKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLR 153 (348)
T ss_dssp --EEEEECTTSC--EEEEEEEEEEGGGTEEEEECCCCGGGCCCCCBCCSTTCCTTCEEEEEECGGGCTTEEEEEEEEEEE
T ss_pred --EEEEEECCCC--EEEEEEEEEcCcCCEEEEEEcCCCCCceeEEecCcccCCCCCEEEEEECCCCCCCcEeEEEEEeec
Confidence 7899999997 789999999999999999999765457899998878889999999999999998999999999887
Q ss_pred cccccC-CCceecceEEEeeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHcCceeee
Q 019504 171 RDIFSQ-AGVTIGGGIQTDAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQYGKVVRA 249 (340)
Q Consensus 171 ~~~~~~-~~~~~~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~~~~~~~ 249 (340)
+..... .......++++|+.+++|+|||||+|.+|+||||+++.+..++...+++|+||++.+++++++|+++|++.++
T Consensus 154 ~~~~~~~~~~~~~~~i~~da~i~~G~SGGPLvn~~G~vvGI~s~~~~~~~~~~g~gfaiP~~~~~~~~~~l~~~g~~~~~ 233 (348)
T 3qo6_A 154 REISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVRFGKVTRP 233 (348)
T ss_dssp EEECCSSSSSCEEEEEEECSCCCTTCTTCEEECTTSCEEEEEEEEECSSSSCSSCEEEEEHHHHHHHHHHHHHHSSCCCE
T ss_pred cccccccCCCcccCEEEEeCCcCCCCcHHHhhCCCCeEEEEEEeeecCCCCcccEEEEEEecchHHHHHHHHhCCceeee
Confidence 654332 1222346799999999999999999999999999999887766668999999999999999999999999999
Q ss_pred eeeEEeccHHHHhhcCCCCCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeC-
Q 019504 250 GLNVDIAPDLVASQLNVGNGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAE- 328 (340)
Q Consensus 250 ~lg~~~~~~~~~~~~~~~~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~- 328 (340)
|||+.+.+...++.+++ .|++|.+|.++|||++|||++.++...+.|+.||+|++|||++|.+..| +..++...+
T Consensus 234 ~lGi~~~~~~~~~~~~~-~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~d---l~~~l~~~~~ 309 (348)
T 3qo6_A 234 ILGIKFAPDQSVEQLGV-SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSD---LYRILDQCKV 309 (348)
T ss_dssp ECCCEECCTTTTTTTTC-SSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSSHH---HHHHHTTCCT
T ss_pred ecCcEEccchhhhhcCC-ceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCHHH---HHHHHHhCCC
Confidence 99999987666666665 7999999999999999999887666667788899999999999999998 666665433
Q ss_pred CCCceEEEEeCC
Q 019504 329 PNQDHLTCLKSS 340 (340)
Q Consensus 329 ~~~~~~~~~~~~ 340 (340)
....+|||+|++
T Consensus 310 g~~v~l~v~R~g 321 (348)
T 3qo6_A 310 GDEVTVEVLRGD 321 (348)
T ss_dssp TCEEEEEEECSS
T ss_pred cCEEEEEEEECC
Confidence 445788888864
No 2
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=3.2e-52 Score=387.69 Aligned_cols=289 Identities=37% Similarity=0.556 Sum_probs=243.1
Q ss_pred HHHHHHHHhCCCeEEEEeeeeccc--------cccCCc------ccccCCceEEEEEcCC-CEEEeCccccCCCCCCCCC
Q 019504 22 RIAQLFEKNTYSVVNIFDVTLRPT--------LNVTGL------VEIPEGNGSGVVWDGK-GHIVTNFHVIGSALSRKPA 86 (340)
Q Consensus 22 ~~~~~~~~~~~svV~I~~~~~~~~--------~~~~~~------~~~~~~~GsGfiI~~~-G~IlT~~Hvv~~~~~~~~~ 86 (340)
++.++++++.+|||.|.+...... ..+++. .....+.||||+|+++ ||||||+||+.++.
T Consensus 14 ~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHVv~~~~----- 88 (345)
T 3stj_A 14 SLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQ----- 88 (345)
T ss_dssp BSHHHHHHHGGGEEEEEEEEC------------------------CCEEEEEEEEEEETTTTEEEECHHHHTTEE-----
T ss_pred CHHHHHHHhCCcEEEEEEEEeecccccCchhhhhhcccccccccCcccceeEEEEEEECCCCEEEEChHHhCCCC-----
Confidence 578999999999999987654321 012221 1122478999999987 99999999999865
Q ss_pred CCccEEEEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecCCCCccceeecCCCCCCCCCEEEEEecCCCCCCceeEEEE
Q 019504 87 EGQVVARVNILASDGVQKNFEGKLVGADRAKDLAVLKIEASEDLLKPINVGQSSFLKVGQQCLAIGNPFGFDHTLTVGVI 166 (340)
Q Consensus 87 ~~~~~~~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~~~~~~G~v 166 (340)
.+.|++.+++ .+++++++.|+.+|||||+++.+. .++++.|+++..++.|++|+++|||++...+++.|+|
T Consensus 89 ------~i~V~~~dg~--~~~a~vv~~d~~~DlAlLkv~~~~-~~~~~~l~~s~~~~~G~~V~aiG~p~g~~~~vt~G~V 159 (345)
T 3stj_A 89 ------KISIQLNDGR--EFDAKLIGSDDQSDIALLQIQNPS-KLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIV 159 (345)
T ss_dssp ------EEEEECTTSC--EEEEEEEEEETTTTEEEEEESSCC-SCCCCCBCCGGGCCTTBEEEEEECGGGCSCEEEEEEE
T ss_pred ------EEEEEeCCCc--EEEEEEEEEcCCCCEEEEEEcccC-CCceEeecCcccCCCCCEEEEEECCCCCCCcEEeeEE
Confidence 8999999997 799999999999999999997653 4789999888889999999999999999999999999
Q ss_pred eeeccccccCCCceecceEEEeeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHcCce
Q 019504 167 SGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQYGKV 246 (340)
Q Consensus 167 s~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~~~~ 246 (340)
+...+...... .+..++++|+.+++|+|||||||.+|+||||+++.....++..+++|+||++.+++++++|++.+++
T Consensus 160 s~~~~~~~~~~--~~~~~iq~da~i~~GnSGGPLvn~~G~vVGI~s~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v 237 (345)
T 3stj_A 160 SALGRSGLNLE--GLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEI 237 (345)
T ss_dssp EEEEECCSSSS--SSCCEEEECSCCCTTCTTCEEECTTSCEEEEEEEEECTTSSCSSCEEEEEHHHHHHHHHHHHHHSSC
T ss_pred eeecccccCCC--CccCEEEEecccCCCcCccceeCCCCEEEEEEeccccCCCCcceeEEEEehHHHHHHHHHHHhcccc
Confidence 99876522211 2346799999999999999999999999999999887766678899999999999999999999999
Q ss_pred eeeeeeEEec--cHHHHhhcCCC--CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCcee
Q 019504 247 VRAGLNVDIA--PDLVASQLNVG--NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRI 322 (340)
Q Consensus 247 ~~~~lg~~~~--~~~~~~~~~~~--~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~ 322 (340)
.++|||+.+. +..+++.++++ .|++|.+|.++|||+++|| ++||+|++|||++|.+..| +..
T Consensus 238 ~~~~lGv~~~~~~~~~a~~~gl~~~~G~~V~~V~~~spA~~aGL-----------~~GDvI~~ing~~v~~~~~---l~~ 303 (345)
T 3stj_A 238 KRGLLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGV-----------KAGDIITSLNGKPLNSFAE---LRS 303 (345)
T ss_dssp CCEECCEEEEECCHHHHHHTTCSCCSSEEEEEECTTSHHHHHTC-----------CTTCEECEETTEECSCHHH---HHH
T ss_pred cccccceeeEeecHHHHHhcCCCCCceEEEEEeccCChHHHcCC-----------CCCCEEEEECCEECCCHHH---HHH
Confidence 9999999774 57888999987 8999999999999999999 9999999999999999998 666
Q ss_pred EEEee-CCCCceEEEEeCC
Q 019504 323 YLICA-EPNQDHLTCLKSS 340 (340)
Q Consensus 323 ~~~~~-~~~~~~~~~~~~~ 340 (340)
.+... .....+|+|+|++
T Consensus 304 ~l~~~~~g~~v~l~v~R~g 322 (345)
T 3stj_A 304 RIATTEPGTKVKLGLLRNG 322 (345)
T ss_dssp HHHTSCTTCEEEEEEEETT
T ss_pred HHHhcCCCCEEEEEEEECC
Confidence 66543 4456788888874
No 3
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=100.00 E-value=1.1e-50 Score=388.99 Aligned_cols=290 Identities=37% Similarity=0.550 Sum_probs=246.0
Q ss_pred hHHHHHHHHhCCCeEEEEeeeeccc--------cccCCc------ccccCCceEEEEEcCC-CEEEeCccccCCCCCCCC
Q 019504 21 ERIAQLFEKNTYSVVNIFDVTLRPT--------LNVTGL------VEIPEGNGSGVVWDGK-GHIVTNFHVIGSALSRKP 85 (340)
Q Consensus 21 ~~~~~~~~~~~~svV~I~~~~~~~~--------~~~~~~------~~~~~~~GsGfiI~~~-G~IlT~~Hvv~~~~~~~~ 85 (340)
.+++++++++.+|||.|++...... ..+++. .....+.||||+|+++ ||||||+||+.++.
T Consensus 13 ~~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfii~~~~G~IlTn~Hvv~~a~---- 88 (436)
T 4a8c_A 13 PSLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQ---- 88 (436)
T ss_pred CCHHHHHHhhCCcEEEEEEEEeecccccCcchhhhhcccccccccCCcCceEEEEEEEECCCCEEEECHHHhCCCC----
Confidence 4689999999999999987654321 011221 1123578999999987 99999999999876
Q ss_pred CCCccEEEEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecCCCCccceeecCCCCCCCCCEEEEEecCCCCCCceeEEE
Q 019504 86 AEGQVVARVNILASDGVQKNFEGKLVGADRAKDLAVLKIEASEDLLKPINVGQSSFLKVGQQCLAIGNPFGFDHTLTVGV 165 (340)
Q Consensus 86 ~~~~~~~~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~~~~~~G~ 165 (340)
.+.|++.||+ .++|++++.|+.+|||||+++.+. .++++.|+++..++.|++|+++|||++...+++.|+
T Consensus 89 -------~i~V~~~dg~--~~~a~vv~~d~~~DlAllkv~~~~-~l~~~~l~~s~~~~~G~~v~aiG~P~g~~~~vt~G~ 158 (436)
T 4a8c_A 89 -------KISIQLNDGR--EFDAKLIGSDDQSDIALLQIQNPS-KLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGI 158 (436)
T ss_pred -------EEEEEeCCCC--EEEEEEEEEcCCCCEEEEEecCCC-CCceEeccCcccCCCCCEEEEEEcCCCCCccEEEEE
Confidence 8999999997 899999999999999999997653 479999998888999999999999999999999999
Q ss_pred EeeeccccccCCCceecceEEEeeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHcCc
Q 019504 166 ISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQYGK 245 (340)
Q Consensus 166 vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~~~ 245 (340)
|+...+..... ..+.++|++|+.+++|+|||||||.+|+||||+++.....++..+++|+||++.+++++++|+++|+
T Consensus 159 vs~~~r~~~~~--~~~~~~iq~da~i~~GnSGGPl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~ 236 (436)
T 4a8c_A 159 VSALGRSGLNL--EGLENFIQTDASINRGNAGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGE 236 (436)
T ss_pred EeeecccccCC--CCccCEEEEcCccCCCCCcCcccCCCCEEEEEEeeeccCCCCceeEEEEEehHHHHHHHHHHHhccc
Confidence 99987752221 1234689999999999999999999999999999988766667899999999999999999999999
Q ss_pred eeeeeeeEEec--cHHHHhhcCCC--CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCce
Q 019504 246 VVRAGLNVDIA--PDLVASQLNVG--NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSR 321 (340)
Q Consensus 246 ~~~~~lg~~~~--~~~~~~~~~~~--~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~ 321 (340)
+.++|||+.+. +..+++.++++ .|++|.+|.++|||+++|| ++||+|++|||++|.+..| +.
T Consensus 237 v~r~~lGv~~~~~~~~~a~~~gl~~~~G~~V~~V~~~spA~~aGL-----------~~GD~I~~vnG~~v~~~~~---l~ 302 (436)
T 4a8c_A 237 IKRGLLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGV-----------KAGDIITSLNGKPLNSFAE---LR 302 (436)
T ss_pred cccccCceEecccCHHHHHHhCCCCCcceEEEEECCCChHHHCCC-----------CCCCEEEEECCEECCCHHH---HH
Confidence 99999999875 57788889887 8999999999999999999 9999999999999999988 55
Q ss_pred eEEEee-CCCCceEEEEeCC
Q 019504 322 IYLICA-EPNQDHLTCLKSS 340 (340)
Q Consensus 322 ~~~~~~-~~~~~~~~~~~~~ 340 (340)
..+... .....+++|+|++
T Consensus 303 ~~l~~~~~g~~v~l~v~R~g 322 (436)
T 4a8c_A 303 SRIATTEPGTKVKLGLLRNG 322 (436)
T ss_pred HHHHhcCCCCEEEEEEEECC
Confidence 555543 3355788888864
No 4
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=100.00 E-value=1.1e-50 Score=389.91 Aligned_cols=288 Identities=36% Similarity=0.533 Sum_probs=234.1
Q ss_pred HHHHHHHHhCCCeEEEEeeeecccc--------------ccCCc--------ccccCCceEEEEEcCC-CEEEeCccccC
Q 019504 22 RIAQLFEKNTYSVVNIFDVTLRPTL--------------NVTGL--------VEIPEGNGSGVVWDGK-GHIVTNFHVIG 78 (340)
Q Consensus 22 ~~~~~~~~~~~svV~I~~~~~~~~~--------------~~~~~--------~~~~~~~GsGfiI~~~-G~IlT~~Hvv~ 78 (340)
++.++++++.+|||.|++....... .+++. .....+.||||+|+++ ||||||+||+.
T Consensus 20 ~~~~~~~~~~pavv~i~~~~~~~~~~~~~~~~~~~~~~~~ff~~~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTn~HVv~ 99 (451)
T 3pv2_A 20 SMAPVLKNIMPAIVNVAVQGYLPNDVTPPGSAGNDEENQPNNRPPQSRMPEKGRKFESIGSGVIIDPNNGVIITNDHVIR 99 (451)
T ss_dssp CSHHHHHHHGGGEEEEEEEEECCC-----------------------------CEEEEEEEEEEEETTTTEEEECHHHHT
T ss_pred CHHHHHHHhCCcEEEEEEEEeecccCCCccccccchhHHhhcccccccccccCcccceeEEEEEEECCCCEEEEChHHhC
Confidence 5789999999999999876532110 11221 1223478999999975 99999999999
Q ss_pred CCCCCCCCCCccEEEEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecCCCCccceeecCCCCCCCCCEEEEEecCCCCC
Q 019504 79 SALSRKPAEGQVVARVNILASDGVQKNFEGKLVGADRAKDLAVLKIEASEDLLKPINVGQSSFLKVGQQCLAIGNPFGFD 158 (340)
Q Consensus 79 ~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~ 158 (340)
++. .+.|++.|++ .++|++++.|+.+|||||+++. ..++++.|+++..++.|++|+++|||++..
T Consensus 100 ~a~-----------~i~V~~~dg~--~~~a~vv~~d~~~DlAlLkv~~--~~l~~~~l~~s~~~~~G~~V~aiG~P~G~~ 164 (451)
T 3pv2_A 100 NAS-----------LITVTLQDGR--RLKARLIGGDSETDLAVLKIDA--KNLKSLVIGDSDKLEVGDFVVAIGNPFGLN 164 (451)
T ss_dssp TEE-----------EEEEECTTSC--EEECEEEEEETTTTEEEEECCC--SSCCCCCBCCGGGCCTTCEEEEEECCCCC-
T ss_pred CCC-----------EEEEEEcCCC--EEEEEEEecCcCCcEEEEEEcC--cCCceeEecCcccCCCCCEEEEEECCCCcc
Confidence 875 8999999997 8999999999999999999975 347899998888899999999999999987
Q ss_pred -----CceeEEEEeeeccccccCCCceecceEEEeeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhH
Q 019504 159 -----HTLTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTV 233 (340)
Q Consensus 159 -----~~~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i 233 (340)
.+++.|+|+...+..... ..+..+|++|+.+++|+|||||||.+|+||||+++.+...++..+++||||++.+
T Consensus 165 ~~~~~~~vt~Givs~~~r~~~~~--~~~~~~iqtda~i~~GnSGGPl~n~~G~VIGI~t~~~~~~~~~~g~gfaIP~~~~ 242 (451)
T 3pv2_A 165 SFGNSQSATFGIVSALKRSDLNI--EGVENFIQTDAAINPGNSGGALVNAKGELIGINTAILSPYGGNVGIGFAIPINMV 242 (451)
T ss_dssp ----CCEEEEEEEEEEC------------CCEEESSCCCGGGTTSEEEETTCCEEEEEECCC------CCCEEEEEHHHH
T ss_pred ccccCCceeEEEEeeccccccCC--CCcceEEEEecccCCCCCcCcccCCCCeEEEEEeEeecCCCCccceeeeehhHHH
Confidence 899999999987752211 1234679999999999999999999999999999987766566889999999999
Q ss_pred HHHHHHHHHcCceeeeeeeEEec--cHHHHhhcCCC---CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECC
Q 019504 234 LKIVPQLIQYGKVVRAGLNVDIA--PDLVASQLNVG---NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNN 308 (340)
Q Consensus 234 ~~~l~~l~~~~~~~~~~lg~~~~--~~~~~~~~~~~---~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g 308 (340)
++++++|++++++.++|||+.+. ++.+++.++++ .|++|.+|.++|||+++|| ++||+|++|||
T Consensus 243 ~~~~~~l~~~g~v~r~~lGv~~~~~~~~~a~~~gl~~~~~G~~V~~V~~~spA~~aGL-----------~~GDvI~~vnG 311 (451)
T 3pv2_A 243 KDVAQQIIKFGSIHRGLMGIFVQHLTPELAQAMGYPEDFQGALVSQVNPNSPAELAGL-----------KAGDIITQIND 311 (451)
T ss_dssp HHHHHHHHHHSSCCCCBCCEEEEECCHHHHHHTTSCTTCCCEEEEEECTTSHHHHHTC-----------CTTCEEEEETT
T ss_pred HHHHHHHHhcCCcccccccceEEeccHHHHHhcCCCcCCceEEEEecCCCChHHHcCC-----------CCCCEEEEECC
Confidence 99999999999999999999874 58889999987 7999999999999999999 99999999999
Q ss_pred EEccCCCCCCCceeEEEe-eCCCCceEEEEeCC
Q 019504 309 KPVSFSCLSIPSRIYLIC-AEPNQDHLTCLKSS 340 (340)
Q Consensus 309 ~~v~~~~d~~~~~~~~~~-~~~~~~~~~~~~~~ 340 (340)
++|.+..| +...+.. ......+++|+|++
T Consensus 312 ~~v~~~~~---l~~~l~~~~~g~~v~l~V~R~g 341 (451)
T 3pv2_A 312 TKITQATQ---VKTTISLLRVGSTVKIIVERDN 341 (451)
T ss_dssp EECCSHHH---HHHHHHTSCTTCEEEEEEEETT
T ss_pred EEcCCHHH---HHHHHHhcCCCCEEEEEEEECC
Confidence 99999988 5655554 33455788888864
No 5
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=100.00 E-value=1.8e-49 Score=366.29 Aligned_cols=286 Identities=34% Similarity=0.464 Sum_probs=237.4
Q ss_pred HHHHHHHHhCCCeEEEEeeeeccccccCCcccccCCceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC
Q 019504 22 RIAQLFEKNTYSVVNIFDVTLRPTLNVTGLVEIPEGNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG 101 (340)
Q Consensus 22 ~~~~~~~~~~~svV~I~~~~~~~~~~~~~~~~~~~~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g 101 (340)
++.++++++.+|||+|.+...... +.......+.||||+|+++||||||+||+.+.. .+.|++.+|
T Consensus 10 ~~~~~~~~~~~sVV~I~~~~~~~~---~~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~~-----------~i~V~~~~g 75 (318)
T 1te0_A 10 SYNLAVRRAAPAVVNVYNRGLNTN---SHNQLEIRTLGSGVIMDQRGYIITNKHVINDAD-----------QIIVALQDG 75 (318)
T ss_dssp CCHHHHHHHGGGEEEEEEEEECSS---SSCCEEEEEEEEEEECSTTCEEEEEHHHHTTCS-----------EEEEECTTS
T ss_pred cHHHHHHhcCCcEEEEEeEeccCC---cccccccCccEEEEEEeCCCEEEECHHHcCCCC-----------EEEEEeCCC
Confidence 467899999999999987654332 112222346799999998899999999998865 789999998
Q ss_pred ceeEEEEEEEEeCCCCcEEEEEEecCCCCccceeecCCCCCCCCCEEEEEecCCCCCCceeEEEEeeeccccccCCCcee
Q 019504 102 VQKNFEGKLVGADRAKDLAVLKIEASEDLLKPINVGQSSFLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQAGVTI 181 (340)
Q Consensus 102 ~~~~~~a~v~~~d~~~DlAlL~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~ 181 (340)
+ .++++++++|+.+|||||+++.+ ..++++.|+++..++.|+.|+++|||++...+++.|+|+...+...... ..
T Consensus 76 ~--~~~a~v~~~d~~~DlAllk~~~~-~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~~~--~~ 150 (318)
T 1te0_A 76 R--VFEALLVGSDSLTDLAVLIIKAT-GGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPT--GR 150 (318)
T ss_dssp C--EEEEEEEEEETTTTEEEEECCCS-SCCCCCCCCTTCCCCTTCEEEEECCCSSSSCCEEEEEEEECCCCCCCTT--CS
T ss_pred C--EEEEEEEEeCCCceEEEEEEeCC-CCCceEEeeCccCCCCCCEEEEEEcCCCCCCcEEeeEEecccccccCCC--Cc
Confidence 6 78999999999999999999876 3478999987777899999999999999888999999998775432211 12
Q ss_pred cceEEEeeccCCCCccceeecCCCcEEEEEeeeeeCCC---CcCceEEEEehHhHHHHHHHHHHcCceeeeeeeEEec--
Q 019504 182 GGGIQTDAAINPGNSGGPLLDSKGNLIGINTAIITQTG---TSAGVGFAIPSSTVLKIVPQLIQYGKVVRAGLNVDIA-- 256 (340)
Q Consensus 182 ~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~---~~~~~~~aip~~~i~~~l~~l~~~~~~~~~~lg~~~~-- 256 (340)
..+|++|+.+++|+|||||||.+|+||||+++.....+ ...+++|+||++.+++++++|++++++.++|||+.+.
T Consensus 151 ~~~i~~d~~~~~G~SGGPl~~~~G~vvGI~s~~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~g~~~~~~lGi~~~~~ 230 (318)
T 1te0_A 151 QNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREI 230 (318)
T ss_dssp CCSEEESSCCCTTTTTSEEECTTCCEEEEEECCSSSSSSCCSCCSCEEEEEHHHHHHHHHHHHHHSSCCCEECCEEEEEC
T ss_pred CCEEEECCCCCCCCCcCceECCCCeEEEEEeeeeccCCccccccceEEeccHHHHHHHHHHHHHcCCcccccceeEeeec
Confidence 35799999999999999999999999999998765421 3568999999999999999999999999999999875
Q ss_pred cHHHHhhcCCC--CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEe-eCCCCce
Q 019504 257 PDLVASQLNVG--NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLIC-AEPNQDH 333 (340)
Q Consensus 257 ~~~~~~~~~~~--~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~-~~~~~~~ 333 (340)
+..+++.++++ .|++|.+|.++|||+++|| ++||+|++|||++|.+..| +..++.. ......+
T Consensus 231 ~~~~~~~~g~~~~~g~~V~~V~~~spA~~aGL-----------~~GD~I~~ing~~v~~~~~---l~~~l~~~~~g~~v~ 296 (318)
T 1te0_A 231 APLHAQGGGIDQLQGIVVNEVSPDGPAANAGI-----------QVNDLIISVDNKPAISALE---TMDQVAEIRPGSVIP 296 (318)
T ss_dssp SCCCSSSSCSSSCCCEEEEEECTTSTTTTTCC-----------CTTCCEEEETTEECCCHHH---HHHHHHTSCTTCEEE
T ss_pred chhHHHhccCCCCCcEEEEEeCCCChHHHCCC-----------CCCCEEEEECCEEcCCHHH---HHHHHHhcCCCCEEE
Confidence 35566777775 7999999999999999999 9999999999999999987 6666654 3344578
Q ss_pred EEEEeCC
Q 019504 334 LTCLKSS 340 (340)
Q Consensus 334 ~~~~~~~ 340 (340)
++|+|++
T Consensus 297 l~v~R~g 303 (318)
T 1te0_A 297 VVVMRDD 303 (318)
T ss_dssp EEEESSS
T ss_pred EEEEECC
Confidence 8888864
No 6
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=100.00 E-value=8.1e-49 Score=379.82 Aligned_cols=281 Identities=24% Similarity=0.396 Sum_probs=228.3
Q ss_pred HhCCCeEEEEeeeeccccccCCcccc-cCCceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEec-CCceeEE
Q 019504 29 KNTYSVVNIFDVTLRPTLNVTGLVEI-PEGNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILAS-DGVQKNF 106 (340)
Q Consensus 29 ~~~~svV~I~~~~~~~~~~~~~~~~~-~~~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~-~g~~~~~ 106 (340)
...+|||+|++....+++..+|.... ..+.||||+|+ +||||||+|||.++. .+.|++. ||+ .+
T Consensus 45 ~~~~sVV~I~~~~~~~~~~~Pw~~~~~~~s~GSGfiI~-dG~IlTN~HVV~~a~-----------~i~V~~~~dg~--~~ 110 (539)
T 4fln_A 45 SFLNAVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIG-DGKLLTNAHCVEHDT-----------QVKVKRRGDDR--KY 110 (539)
T ss_dssp HHHTTEEEEEEEECCBCSSSTTSBCCCEEEEEEEEEEE-TTEEEECGGGGTTEE-----------EEEEECTTCCC--CE
T ss_pred ccCCCeEEEEEEecCCCCCCccccCCccceEEEEEEEE-CCEEEEChHHcCCCC-----------eEEEEEccCCE--EE
Confidence 34589999999888888888887554 34789999998 799999999999875 8999885 776 79
Q ss_pred EEEEEEeCCCCcEEEEEEecCC--CCccceeecCCCCCCCCCEEEEEecCCCCCC-ceeEEEEeeeccccccCCCceecc
Q 019504 107 EGKLVGADRAKDLAVLKIEASE--DLLKPINVGQSSFLKVGQQCLAIGNPFGFDH-TLTVGVISGLNRDIFSQAGVTIGG 183 (340)
Q Consensus 107 ~a~v~~~d~~~DlAlL~v~~~~--~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~~-~~~~G~vs~~~~~~~~~~~~~~~~ 183 (340)
+|++++.|+.+|||||+++... ..++++.+++ .++.|++|+++|||++... +++.|+||++.+........ ...
T Consensus 111 ~A~vv~~D~~~DLAvLkv~~~~~~~~~~pl~~g~--~~~vGd~V~aiG~P~g~~~~tvT~GIVSa~~r~~~~~~~~-~~~ 187 (539)
T 4fln_A 111 VAKVLVRGVDCDIALLSVESEDFWKGAEPLRLGH--LPRLQDSVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS-DLL 187 (539)
T ss_dssp EEEEEEEETTTTEEEEEECCSSSSTTCCCCCBCC--CCCTTCEEEEEECCSSSCCCEEEEEEEEEEEEEECTTSCC-EEE
T ss_pred EEEEEEECCCCCEEEEEEeCCcCCcCCceeecCC--cCcCCCeEEEEEcCCCCCCCcEEeEEECcccccccCCCCc-cee
Confidence 9999999999999999998753 2345666654 4578999999999998754 89999999988765443222 224
Q ss_pred eEEEeeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHcCcee-eeeeeEEec---cHH
Q 019504 184 GIQTDAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQYGKVV-RAGLNVDIA---PDL 259 (340)
Q Consensus 184 ~i~~d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~~~~~-~~~lg~~~~---~~~ 259 (340)
+||+|+++++|+|||||||.+|+||||+++.+... +..+++||||++.+++++++|+++|++. ++|||+.+. ++.
T Consensus 188 ~IQtDAaInpGnSGGPLvn~~GeVIGIntai~~~~-~~~gigfAIP~~~v~~vl~~l~~~G~~~~r~~LGv~~~~~~~~~ 266 (539)
T 4fln_A 188 GIQIDAAINPGNSGGPAFNDQGECIGVAFQVYRSE-ETENIGYVIPTTVVSHFLTDYERNGKYTGYPCLGVLLQKLENPA 266 (539)
T ss_dssp EEEESSCCCTTTTTSEEECSSSCEEEEECCCC------CCCEEEEEHHHHHHHHHHHHTTTSCCCCCBCCEEEEECCCHH
T ss_pred EEEEEeEecCCCccchhccCCCcEEEEEEEEecCC-CCCcceecccHHHHHHHHHHHHHcCeEEeeeecceEEEecCCHH
Confidence 69999999999999999999999999999876543 3578999999999999999999999886 899999874 467
Q ss_pred HHhhcCCC--CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCC--------ceeEEEe-eC
Q 019504 260 VASQLNVG--NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIP--------SRIYLIC-AE 328 (340)
Q Consensus 260 ~~~~~~~~--~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~--------~~~~~~~-~~ 328 (340)
+++.++++ .|++|.+|.++|||+++ | ++||||++|||++|.+..| ++ +..++.. +.
T Consensus 267 ~~~~~~l~~~~Gv~V~~V~~~spA~~a-l-----------~~GDvI~~idg~~V~~~g~-~~~~~~~~~~l~~~v~~~~~ 333 (539)
T 4fln_A 267 LRECLKVPTNEGVLVRRVEPTSDASKV-L-----------KEGDVIVSFDDLHVGCEGT-VPFRSSERIAFRYLISQKFA 333 (539)
T ss_dssp HHHHHTCSSSBCEEEEEECTTSGGGGT-C-----------CTTCEEEEETTEECBSSSE-EECSTTCEEETHHHHHTSCT
T ss_pred HHHhcCCCCcCceeeecccCCChHHhC-c-----------cCCCEEEEECCEEeCcCCe-eccccchhHHHHHHHHcCCC
Confidence 88888887 79999999999999876 8 9999999999999998875 22 1122333 34
Q ss_pred CCCceEEEEeCC
Q 019504 329 PNQDHLTCLKSS 340 (340)
Q Consensus 329 ~~~~~~~~~~~~ 340 (340)
...++|+|+|++
T Consensus 334 Gd~v~l~v~R~G 345 (539)
T 4fln_A 334 GDIAEIGIIRAG 345 (539)
T ss_dssp TCEEEEEEEETT
T ss_pred CCEEEEEEEECC
Confidence 456788889874
No 7
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=100.00 E-value=5.7e-49 Score=377.64 Aligned_cols=289 Identities=39% Similarity=0.548 Sum_probs=240.0
Q ss_pred HHHHHHHHhCCCeEEEEeeeeccc---------cccCCcc----------------------------cccCCceEEEEE
Q 019504 22 RIAQLFEKNTYSVVNIFDVTLRPT---------LNVTGLV----------------------------EIPEGNGSGVVW 64 (340)
Q Consensus 22 ~~~~~~~~~~~svV~I~~~~~~~~---------~~~~~~~----------------------------~~~~~~GsGfiI 64 (340)
++.++++++.+|||.|++...... ..+++.. ....+.||||+|
T Consensus 14 ~~~~~~~~~~pavV~i~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GSG~ii 93 (448)
T 1ky9_A 14 SLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGNGGGQQQKFMALGSGVII 93 (448)
T ss_dssp CSHHHHHHHGGGEEEEEEEEEEEECCCCSSCCTTCCCC---------------------------CEEEEEEEEEEEEEE
T ss_pred cHHHHHHHhCCcEEEEEEEEEecccCCccchhhhhhhccccccccccccccccccccccccccccccccccccEEEEEEE
Confidence 578999999999999987543210 0112110 112367999999
Q ss_pred cCC-CEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecCCCCccceeecCCCCCC
Q 019504 65 DGK-GHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEGKLVGADRAKDLAVLKIEASEDLLKPINVGQSSFLK 143 (340)
Q Consensus 65 ~~~-G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~~~~~~~~l~~~~~~~ 143 (340)
+++ ||||||+||+.++. .+.|++.||+ .++|++++.|+.+|||||+++.. ..++++.|+++..++
T Consensus 94 ~~~~g~IlTn~HVv~~a~-----------~i~V~~~dg~--~~~a~vv~~d~~~DlAvlkv~~~-~~~~~~~l~~s~~~~ 159 (448)
T 1ky9_A 94 DADKGYVVTNNHVVDNAT-----------VIKVQLSDGR--KFDAKMVGKDPRSDIALIQIQNP-KNLTAIKMADSDALR 159 (448)
T ss_dssp ETTTTEEEEEHHHHTTEE-----------EEEEEETTSC--EEEEEEEEEETTTTEEEEEESSC-CSCCCCCBCCGGGCC
T ss_pred ECCCCEEEEChHHhCCCC-----------EEEEEECCCC--EEEEEEEEEcCCCCEEEEEecCC-CCCceEEecccccCC
Confidence 987 99999999999875 8999999997 89999999999999999999864 347899999888899
Q ss_pred CCCEEEEEecCCCCCCceeEEEEeeeccccccCCCceecceEEEeeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCc
Q 019504 144 VGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAG 223 (340)
Q Consensus 144 ~G~~v~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~ 223 (340)
+|++|+++|||++...+++.|+|+...+.... ...+.++|++|+.+++|+|||||||.+|+||||+++.....++..+
T Consensus 160 ~G~~V~aiG~P~g~~~tvt~Givs~~~r~~~~--~~~~~~~iqtda~i~~GnSGGpl~n~~G~vvGI~~~~~~~~~~~~g 237 (448)
T 1ky9_A 160 VGDYTVAIGNPFGLGETVTSGIVSALGRSGLN--AENYENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIG 237 (448)
T ss_dssp TTCEEEEEECTTSSSCEEEEEEEEEESSCC-------CCCCEEESCCCTTSCCCSEEECTTSCEEEEEECSSTTSCCCSS
T ss_pred CCCEEEEEECCCCCCCeEEeEEEeeccccccC--CCCccCEEEEcCCCCCCCCCCeeECCCCEEEEEEEEeecCCCCccc
Confidence 99999999999999999999999998775211 1123467999999999999999999999999999987765555678
Q ss_pred eEEEEehHhHHHHHHHHHHcCceeeeeeeEEec--cHHHHhhcCCC--CCcEEEeeCCCChhhhcCCCccccCCCCCCcC
Q 019504 224 VGFAIPSSTVLKIVPQLIQYGKVVRAGLNVDIA--PDLVASQLNVG--NGALVLQVPGNSLAAKAGILPTTRGFAGNIIL 299 (340)
Q Consensus 224 ~~~aip~~~i~~~l~~l~~~~~~~~~~lg~~~~--~~~~~~~~~~~--~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~ 299 (340)
++|+||++.+++++++|+++|++.++|||+.+. +..+++.++++ .|++|.+|.++|||+++|| ++
T Consensus 238 ~gfaIP~~~~~~~~~~l~~~g~v~~~~LGv~~~~~~~~~a~~lgl~~~~G~~V~~V~~gspA~~AGL-----------~~ 306 (448)
T 1ky9_A 238 IGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGI-----------KA 306 (448)
T ss_dssp SEEEEEHHHHHHHHHHHHHHSSCCBCCCCCSCCCTTSHHHHTSCCTTCCSEECCCCTTCSSSTTTTC-----------CT
T ss_pred eeeeeecccchhhHHHHhhhcccceeccccccccccHHHHHHhCCCCCCceEEEEeccCCHHHHcCC-----------CC
Confidence 999999999999999999999999999999875 46788889987 7999999999999999999 99
Q ss_pred CcEEEEECCEEccCCCCCCCceeEEEe-eCCCCceEEEEeCC
Q 019504 300 GDIIVAVNNKPVSFSCLSIPSRIYLIC-AEPNQDHLTCLKSS 340 (340)
Q Consensus 300 GDvi~~i~g~~v~~~~d~~~~~~~~~~-~~~~~~~~~~~~~~ 340 (340)
||+|++|||++|.+..| +..++.. +.....+++|+|++
T Consensus 307 GDvI~~inG~~v~~~~~---l~~~l~~~~~g~~v~l~v~R~g 345 (448)
T 1ky9_A 307 GDVITSLNGKPISSFAA---LRAQVGTMPVGSKLTLGLLRDG 345 (448)
T ss_dssp TCEECBSSSSBCCSSHH---HHHHTTSSBTTCCCEEEEESSS
T ss_pred CCEEEEECCEEcCCHHH---HHHHHHhcCCCCEEEEEEEECC
Confidence 99999999999999987 5555544 33445788888863
No 8
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=100.00 E-value=2.2e-47 Score=353.17 Aligned_cols=283 Identities=31% Similarity=0.432 Sum_probs=223.4
Q ss_pred chhHHHHHHHHhCCCeEEEEeeeeccccccCCcccccCCceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEe
Q 019504 19 NEERIAQLFEKNTYSVVNIFDVTLRPTLNVTGLVEIPEGNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILA 98 (340)
Q Consensus 19 ~~~~~~~~~~~~~~svV~I~~~~~~~~~~~~~~~~~~~~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~ 98 (340)
....+.++++++.+|||+|......+ +.+. ....+.||||+|+++||||||+||+.+.. .+.|++
T Consensus 13 ~~~~~~~~~~~~~~sVV~I~~~~~~~---~~~~-~~~~~~gsG~iI~~~G~IlT~aHvv~~~~-----------~i~V~~ 77 (325)
T 1lcy_A 13 QYNFIADVVEKTAPAVVYIEILDRHP---FLGR-EVPISNGSGFVVAADGLIVTNAHVVADRR-----------RVRVRL 77 (325)
T ss_dssp HSCHHHHHHHHHGGGEEEEEEEEEET---TTTE-EEEEEEEEEEEEETTTEEEECHHHHTTCS-----------EEEEEC
T ss_pred chhHHHHHHHHhCCcEEEEEEEecCc---cCCC-ccccccEEEEEEeCCCEEEECHHHcCCCC-----------EEEEEe
Confidence 34568899999999999998643321 1111 12346799999999999999999999865 789999
Q ss_pred cCCceeEEEEEEEEeCCCCcEEEEEEecCCCCccceeecCCCCCCCCCEEEEEecCCCCCCceeEEEEeeeccccccCC-
Q 019504 99 SDGVQKNFEGKLVGADRAKDLAVLKIEASEDLLKPINVGQSSFLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQA- 177 (340)
Q Consensus 99 ~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~~~~~~G~vs~~~~~~~~~~- 177 (340)
.+|+ .+++++++.|+.+|||||+++.+. .++++.|+++..++.|+.|+++|||.+...+++.|+|+...+......
T Consensus 78 ~~g~--~~~a~v~~~d~~~DlAllkl~~~~-~~~~~~l~~~~~~~~G~~v~~~G~p~~~~~~v~~G~vs~~~~~~~~~g~ 154 (325)
T 1lcy_A 78 LSGD--TYEAVVTAVDPVADIATLRIQTKE-PLPTLPLGRSADVRQGEFVVAMGSPFALQNTITSGIVSSAQRPARDLGL 154 (325)
T ss_dssp TTSC--EEEEEEEEEETTTTEEEEECCCSS-CCCCCCBCCGGGCCTTCEEEECCCTTSSSSCCEEEEBCSCSCC------
T ss_pred CCCC--EEEEEEEEECCCCCEEEEEEcCCC-CCceEEecccccCCCCCEEEEEECCCCCCCcEEeEEEecccccccccCC
Confidence 9987 788999999999999999998753 478899987777899999999999999888999999998765421110
Q ss_pred CceecceEEEeeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHc------Cceeeeee
Q 019504 178 GVTIGGGIQTDAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQY------GKVVRAGL 251 (340)
Q Consensus 178 ~~~~~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~------~~~~~~~l 251 (340)
......+|++|+.+++|+|||||||.+|+||||+++... .+++|+||++.++++++++.+. +++.+++|
T Consensus 155 ~~~~~~~i~~d~~~~~G~SGGPl~~~~G~vVGI~s~~~~-----~g~~~aip~~~i~~~l~~~~~~~~~~g~~~~~r~~l 229 (325)
T 1lcy_A 155 PQTNVEYIQTDAAIDFGNAGGPLVNLDGEVIGVNTMKVT-----AGISFAIPSDRLREFLHRGEKKNSSSGISGSQRRYI 229 (325)
T ss_dssp ---CCCCEEESSCCSTTTTTSEEEETTSCEEEEEEEEEE-----TTEEEEEEHHHHHHHTCC---------------EEC
T ss_pred CCCCCCEEEEcCCCCCCCccccEECCCCEEEEEEeEeec-----CCeeEEEEHHHHHHHHHHhhhccccccccccccccc
Confidence 011235799999999999999999999999999998763 4689999999999999998764 35778888
Q ss_pred eEEe--ccHHHHhhcCCC--------CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCce
Q 019504 252 NVDI--APDLVASQLNVG--------NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSR 321 (340)
Q Consensus 252 g~~~--~~~~~~~~~~~~--------~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~ 321 (340)
|+.+ .++.+++.++++ .|++|.+|.++|||+++|| ++||+|++|||++|.+..| +.
T Consensus 230 Gv~~~~l~~~~~~~~~l~~~~~~~~~~gv~V~~V~~~spA~~aGl-----------~~GDvI~~ing~~v~~~~~---l~ 295 (325)
T 1lcy_A 230 GVMMLTLSPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGL-----------RPGDVILAIGEQMVQNAED---VY 295 (325)
T ss_dssp CEEEEECCHHHHHHHTTSCTTSCCCSSCEEEEEECTTSHHHHHTC-----------CTTCEEEEETTEECCSHHH---HH
T ss_pred ceEeecCCHHHHHhhCccccccccCCCCeEEEEeCcCChHHHCCC-----------CCCCEEEEECCEEcCCHHH---HH
Confidence 8876 456777777663 6999999999999999999 9999999999999999988 55
Q ss_pred eEEEeeCCCCceEEEEeCC
Q 019504 322 IYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~ 340 (340)
.++.. ....+++|+|.+
T Consensus 296 ~~l~~--~~~v~l~v~R~g 312 (325)
T 1lcy_A 296 EAVRT--QSQLAVQIRRGR 312 (325)
T ss_dssp HHHTT--CSSEEEEEEETT
T ss_pred HHHhC--CCeEEEEEEECC
Confidence 55543 245788888864
No 9
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=100.00 E-value=7.2e-47 Score=350.99 Aligned_cols=288 Identities=30% Similarity=0.421 Sum_probs=160.4
Q ss_pred CCCCcchhHHHHHHHHhCCCeEEEEeeeeccccccCCcccccCCceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEE
Q 019504 14 GQLLPNEERIAQLFEKNTYSVVNIFDVTLRPTLNVTGLVEIPEGNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVAR 93 (340)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~svV~I~~~~~~~~~~~~~~~~~~~~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~ 93 (340)
.........+.++++++.+|||+|......+ + .......+.||||+|+++||||||+||+.+.. .
T Consensus 7 ~~~~~~~~~~~~~~~~~~~sVV~I~~~~~~~---~-~~~~~~~~~GSG~iI~~~G~ILTaaHvv~~~~-----------~ 71 (332)
T 3num_A 7 NSLRHKYNFIADVVEKIAPAVVHIELFRKLP---F-SKREVPVASGSGFIVSEDGLIVTNAHVVTNKH-----------R 71 (332)
T ss_dssp SSHHHHHCHHHHHHHHHGGGEEEEEEEEECT---T-SSCEEEEEEEEEEEEETTTEEEECTTTCCTTS-----------E
T ss_pred CccccccchHHHHHHHhcCcEEEEEEEeccc---c-CCCcceeeeEEEEEEeCCCEEEEChHHcCCCC-----------E
Confidence 3344566788999999999999998754322 1 11122446799999998899999999998865 7
Q ss_pred EEEEecCCceeEEEEEEEEeCCCCcEEEEEEecCCCCccceeecCCCCCCCCCEEEEEecCCCCCCceeEEEEeeecccc
Q 019504 94 VNILASDGVQKNFEGKLVGADRAKDLAVLKIEASEDLLKPINVGQSSFLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDI 173 (340)
Q Consensus 94 i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~~~~~~G~vs~~~~~~ 173 (340)
+.|++.++. .++++++..|+.+|||||+++.+. .++++.|+++..++.|+.|+++|||++...+++.|+++...+..
T Consensus 72 i~V~~~~g~--~~~a~~~~~d~~~DlAlL~l~~~~-~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~ 148 (332)
T 3num_A 72 VKVELKNGA--TYEAKIKDVDEKADIALIKIDHQG-KLPVLLLGRSSELRPGEFVVAIGSPFSLQNTVTTGIVSTTQRGG 148 (332)
T ss_dssp EEEEETTSC--EEEEEEEEEETTTTEEEEEECCSS-CCCCCCBCCTTSCCTTCEEEEECC-----CCEEEEEEEEC----
T ss_pred EEEEECCCC--EEEEEEEEecCCCCeEEEEEcCCC-CCceeeecCcccCCCCCEEEEEECCCCCCcceeeeEEEeecccc
Confidence 899999987 789999999999999999999763 47888898778889999999999999998999999999876532
Q ss_pred ccCC-CceecceEEEeeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH---c--Ccee
Q 019504 174 FSQA-GVTIGGGIQTDAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ---Y--GKVV 247 (340)
Q Consensus 174 ~~~~-~~~~~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~---~--~~~~ 247 (340)
.... ......++++|+.+++|+|||||||.+|+||||+++... .+++|+||++.++++++++.+ . +.+.
T Consensus 149 ~~~~~~~~~~~~i~~d~~i~~G~SGGPlv~~~G~vvGI~s~~~~-----~g~~~aip~~~i~~~l~~~~~~~~~g~~~~~ 223 (332)
T 3num_A 149 KELGLRNSDMDYIQTDAIINYGNAGGPLVNLDGEVIGINTLKVT-----AGISFAIPSDKIKKFLTESHDRQAKGKAITK 223 (332)
T ss_dssp ----------CCEEESSCCCTTTTTSEEEETTSCEEEEEEEEEE-----TTEEEEEEHHHHHHHHHHHCC----------
T ss_pred cccCcCCCcCCEEEEECCcCCCCcHHHhhCCCCcEEEEEeeEec-----ccceEEECHHHHHHHHHHHhhhhccCccccc
Confidence 2111 111125689999999999999999999999999998764 578999999999999999853 2 3456
Q ss_pred eeeeeEEecc--HHHHhhc-----CC---CCCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCC
Q 019504 248 RAGLNVDIAP--DLVASQL-----NV---GNGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLS 317 (340)
Q Consensus 248 ~~~lg~~~~~--~~~~~~~-----~~---~~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~ 317 (340)
++|||+.+.+ ...++.+ ++ ..|++|.+|.++|||+++|| ++||+|++|||++|.+..|
T Consensus 224 r~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~v~~~spA~~aGl-----------~~GD~I~~ing~~v~~~~~- 291 (332)
T 3num_A 224 KKYIGIRMMSLTSSKAKELKDRHRDFPDVISGAYIIEVIPDTPAEAGGL-----------KENDVIISINGQSVVSAND- 291 (332)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccceEEEecCHHHhhhhhhhccccCCCCCceEEEEeccCCChHHcCC-----------CCCCEEEEECCEECCCHHH-
Confidence 8999998753 3333322 22 37999999999999999999 9999999999999999998
Q ss_pred CCceeEEEeeCCCCceEEEEeCC
Q 019504 318 IPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
+..++.. ....+++|+|++
T Consensus 292 --~~~~l~~--~~~v~l~v~R~g 310 (332)
T 3num_A 292 --VSDVIKR--ESTLNMVVRRGN 310 (332)
T ss_dssp -----------------------
T ss_pred --HHHHHhC--CCeEEEEEEECC
Confidence 5555543 344788888863
No 10
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=100.00 E-value=3.1e-46 Score=345.73 Aligned_cols=283 Identities=36% Similarity=0.509 Sum_probs=225.4
Q ss_pred hHHHHHHHHhCCCeEEEEeeeeccccccCCcccccCCceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC
Q 019504 21 ERIAQLFEKNTYSVVNIFDVTLRPTLNVTGLVEIPEGNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD 100 (340)
Q Consensus 21 ~~~~~~~~~~~~svV~I~~~~~~~~~~~~~~~~~~~~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~ 100 (340)
.++.++++++.+|||+|..... ...+.||||+|+++||||||+||+.+...... ......+.|++.+
T Consensus 6 ~~~~~~~~~~~~svV~I~~~~~-----------~~~~~gsG~iI~~~g~ILT~aHvv~~~~~~~~--~~~~~~i~V~~~~ 72 (324)
T 1y8t_A 6 GSVEQVAAKVVPSVVMLETDLG-----------RQSEEGSGIILSAEGLILTNNHVIAAAAKPPL--GSPPPKTTVTFSD 72 (324)
T ss_dssp CCHHHHHHHHGGGEEEEEEEC---------------CEEEEEECCTTSEEEEEHHHHTTCC----------CEEEEEETT
T ss_pred ccHHHHHHHhcCcEEEEEEEcc-----------CCCceEEEEEEeCCCEEEEChHHcCCcccccc--cCCceEEEEEeCC
Confidence 4578999999999999976322 12356999999987999999999986531000 0000268889999
Q ss_pred CceeEEEEEEEEeCCCCcEEEEEEecCCCCccceeecCCCCCCCCCEEEEEecCCCCCCceeEEEEeeeccccccCC--C
Q 019504 101 GVQKNFEGKLVGADRAKDLAVLKIEASEDLLKPINVGQSSFLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQA--G 178 (340)
Q Consensus 101 g~~~~~~a~v~~~d~~~DlAlL~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~~~~~~G~vs~~~~~~~~~~--~ 178 (340)
++ .++++++.+|+..|||||+++.+ ..++++.|+++..++.|+.|+++|||++...+++.|+++...+...... +
T Consensus 73 g~--~~~a~vv~~d~~~DlAllkl~~~-~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~G~vs~~~~~~~~~~~~g 149 (324)
T 1y8t_A 73 GR--TAPFTVVGADPTSDIAVVRVQGV-SGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAG 149 (324)
T ss_dssp CC--EECEEEEECCTTTTEEEEEECSC-CSCCCCEECCSTTCCTTCEEEEEECGGGCTTEEEEEEEEEEEEEECC-----
T ss_pred CC--EEEEEEEEeCCCCCEEEEEECCC-CCCceEEecCcccCCCCCEEEEEEcCCCCCCcEeeeEEeecccccccccccC
Confidence 86 78899999999999999999976 3478999987777899999999999999888899999998765432111 1
Q ss_pred --ceecceEEEeeccCCCCccceeecCCCcEEEEEeeeeeCC-------CCcCceEEEEehHhHHHHHHHHHHcCceeee
Q 019504 179 --VTIGGGIQTDAAINPGNSGGPLLDSKGNLIGINTAIITQT-------GTSAGVGFAIPSSTVLKIVPQLIQYGKVVRA 249 (340)
Q Consensus 179 --~~~~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~-------~~~~~~~~aip~~~i~~~l~~l~~~~~~~~~ 249 (340)
.....+|++|+.+++|+|||||+|.+|+||||+++..... .+..+++|+||++.+++++++|+++|++.++
T Consensus 150 ~~~~~~~~i~~d~~~~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~~~~~g~~~aIP~~~v~~~l~~l~~~g~~~~~ 229 (324)
T 1y8t_A 150 NQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHA 229 (324)
T ss_dssp --CCCEEEEEECSCCCTTCTTEEEECTTSEEEEEEEEECCC-------CCCCSSCEEEEEHHHHHHHHHHHHHHSCCCCE
T ss_pred cccccCCEEEEcCCCCCCCccCcEECCCCeEEEEEeeecccCcccccccccccceEEecCHHHHHHHHHHHHHcCCcccc
Confidence 1223579999999999999999999999999999876432 2246799999999999999999999999999
Q ss_pred eeeEEeccHHHHhhcCCCCCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEee-C
Q 019504 250 GLNVDIAPDLVASQLNVGNGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICA-E 328 (340)
Q Consensus 250 ~lg~~~~~~~~~~~~~~~~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~-~ 328 (340)
|||+.+... ....|++|.+|.++|||+++|| ++||+|++|||++|.+..| +..++... .
T Consensus 230 ~lGi~~~~~------~~~~g~~V~~v~~~spA~~aGl-----------~~GD~I~~ing~~v~~~~~---l~~~l~~~~~ 289 (324)
T 1y8t_A 230 SLGVQVTND------KDTLGAKIVEVVAGGAAANAGV-----------PKGVVVTKVDDRPINSADA---LVAAVRSKAP 289 (324)
T ss_dssp ECCEEEESC------SSSSSEEEEEECTTSTTTTTTC-----------CTTCEEEEETTEECCSHHH---HHHHHHTSCT
T ss_pred ccceEeeec------cCCCceEEEEECCCChHHHcCC-----------CCCCEEEEECCEECCCHHH---HHHHHHhcCC
Confidence 999998542 1247999999999999999999 9999999999999999987 55555443 3
Q ss_pred CCCceEEEEe-C
Q 019504 329 PNQDHLTCLK-S 339 (340)
Q Consensus 329 ~~~~~~~~~~-~ 339 (340)
....+++|+| +
T Consensus 290 g~~v~l~v~R~~ 301 (324)
T 1y8t_A 290 GATVALTFQDPS 301 (324)
T ss_dssp TCEEEEEEECSS
T ss_pred CCEEEEEEEECC
Confidence 3446888888 5
No 11
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=8.1e-39 Score=283.39 Aligned_cols=213 Identities=40% Similarity=0.629 Sum_probs=161.6
Q ss_pred HHHHHHHHhCCCeEEEEeeeeccc--------cccCCc------ccccCCceEEEEEcCC-CEEEeCccccCCCCCCCCC
Q 019504 22 RIAQLFEKNTYSVVNIFDVTLRPT--------LNVTGL------VEIPEGNGSGVVWDGK-GHIVTNFHVIGSALSRKPA 86 (340)
Q Consensus 22 ~~~~~~~~~~~svV~I~~~~~~~~--------~~~~~~------~~~~~~~GsGfiI~~~-G~IlT~~Hvv~~~~~~~~~ 86 (340)
++.++++++.+|||.|.+...... ..+++. .....+.||||+|+++ ||||||+||+.++.
T Consensus 14 ~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHvv~~a~----- 88 (245)
T 3sti_A 14 SLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQ----- 88 (245)
T ss_dssp BSHHHHHHHGGGEEEC----------------------------------CCEEEEEETTTTEEEECGGGC---------
T ss_pred CHHHHHHHhCCceEEEEEEEeeccccccchhhhhhccccccccccccccceEEEEEEeCCCCEEEEcHHHhCCCC-----
Confidence 578999999999999987553321 011111 1123578999999988 99999999999875
Q ss_pred CCccEEEEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecCCCCccceeecCCCCCCCCCEEEEEecCCCCCCceeEEEE
Q 019504 87 EGQVVARVNILASDGVQKNFEGKLVGADRAKDLAVLKIEASEDLLKPINVGQSSFLKVGQQCLAIGNPFGFDHTLTVGVI 166 (340)
Q Consensus 87 ~~~~~~~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~~~~~~G~v 166 (340)
.+.|++.+++ .++++++..|+.+|||||+++.+. .++++.|+++..++.|+.|+++|||++...+++.|+|
T Consensus 89 ------~i~V~~~dg~--~~~a~vv~~d~~~DlAlLkv~~~~-~~~~~~l~~s~~~~~G~~v~aiG~P~g~~~~vt~G~v 159 (245)
T 3sti_A 89 ------KISIQLNDGR--EFDAKLIGSDDQSDIALLQIQNPS-KLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIV 159 (245)
T ss_dssp ------CEEEECTTSC--EEEEEEEEEETTTTEEEEEESSCC-SCCCCCBCCGGGCCTTBEEEEEECGGGSCCEEEEEEE
T ss_pred ------EEEEEECCCC--EEEEEEEEecCCCCEEEEEeccCC-CCceeeecCcCCCCCCCEEEEEECCCCCCCcEEeeEE
Confidence 7899999997 789999999999999999997643 4789999887788999999999999999999999999
Q ss_pred eeeccccccCCCceecceEEEeeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHcCce
Q 019504 167 SGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQYGKV 246 (340)
Q Consensus 167 s~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~~~~ 246 (340)
+...+...... .+..+|++|+.+++|+|||||||.+|+||||+++.+...++..+++||||++.+++++++|++.|+.
T Consensus 160 s~~~~~~~~~~--~~~~~i~tda~i~~G~SGGPLvn~~G~vVGI~s~~~~~~~~~~g~~faIP~~~~~~~~~~l~~~g~~ 237 (245)
T 3sti_A 160 SALGRSGLNLE--GLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEI 237 (245)
T ss_dssp EECSSCSSCCT--TCSSCEEESSCCCTTTTTSEEECTTSCEEEEEECCC------CCCEEEEEHHHHHHHHHHHHHHHHH
T ss_pred eeecccccCCC--CccCEEEEcCCcCCCcchhHeecCCCeEEEEEEeEECCCCCcceEEEEEeHHHHHHHHHHHHHcCCC
Confidence 98876522111 2245799999999999999999999999999999877665667899999999999999999999887
Q ss_pred eeee
Q 019504 247 VRAG 250 (340)
Q Consensus 247 ~~~~ 250 (340)
.++|
T Consensus 238 ~~~~ 241 (245)
T 3sti_A 238 LEHH 241 (245)
T ss_dssp C---
T ss_pred CCcc
Confidence 6654
No 12
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=100.00 E-value=1.2e-38 Score=281.72 Aligned_cols=219 Identities=42% Similarity=0.636 Sum_probs=168.3
Q ss_pred hHHHHHHHHhCCCeEEEEeeeecccc-----------ccCCc----cccc-CCceEEEEEcCCCEEEeCccccCCCCCCC
Q 019504 21 ERIAQLFEKNTYSVVNIFDVTLRPTL-----------NVTGL----VEIP-EGNGSGVVWDGKGHIVTNFHVIGSALSRK 84 (340)
Q Consensus 21 ~~~~~~~~~~~~svV~I~~~~~~~~~-----------~~~~~----~~~~-~~~GsGfiI~~~G~IlT~~Hvv~~~~~~~ 84 (340)
.++.++++++.+|||+|.+....... .+++. .... .+.||||+|+++||||||+||+.+..
T Consensus 4 ~~~~~~~~~~~psVV~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsG~iI~~~g~ILTnaHvv~~~~--- 80 (239)
T 1l1j_A 4 SPIVNVVEACAPAVVKIDVVKTVKTSFFDPYFEQFFKKWFGELPPGFERQVASLGSGFIFDPEGYILTNYHVVGGAD--- 80 (239)
T ss_dssp CHHHHHHHHHGGGEEEEEEECC--CCCCCHHHHHHHHHHCTTSCTTHHHHEEEEEEEEEEETTTEEEEEHHHHSSCS---
T ss_pred hhHHHHHHHhCCCEEEEEEEEeecccccccccchhhhhhccccccccccccCceEEEEEEeCCCEEEEChHHhCCCC---
Confidence 46889999999999999875433210 01111 1112 46799999998899999999998765
Q ss_pred CCCCccEEEEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecCCCCccceeecCCCCCCCCCEEEEEecCCCCCCceeEE
Q 019504 85 PAEGQVVARVNILASDGVQKNFEGKLVGADRAKDLAVLKIEASEDLLKPINVGQSSFLKVGQQCLAIGNPFGFDHTLTVG 164 (340)
Q Consensus 85 ~~~~~~~~~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~~~~~~G 164 (340)
.+.|++.+|+ .+++++++.|+.+|||||+++.+...++++.|+++..++.|+.|+++|||++...+++.|
T Consensus 81 --------~i~V~~~~g~--~~~a~vv~~d~~~DlAllkl~~~~~~~~~~~l~~s~~~~~G~~v~~iG~p~g~~~~vt~G 150 (239)
T 1l1j_A 81 --------NITVTMLDGS--KYDAEYIGGDEELDIAVIKIKASDKKFPYLEFGDSDKVKIGEWAIAIGNPLGFQHTVTVG 150 (239)
T ss_dssp --------SCEEECTTSC--EEEBCCCEEETTTTEEEEEBCCSSSCCCCCEECCGGGCCTTCEEEEEECTTSSSCEEEEE
T ss_pred --------EEEEEECCCC--EEEEEEEEEcCCCCEEEEEEcCCCCCCceEEecCccCCccccEEEEEECCCCCCCcEEEE
Confidence 6788899986 788999999999999999999753347899998777789999999999999988899999
Q ss_pred EEeeeccccccCCC-ceecceEEEeeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHc
Q 019504 165 VISGLNRDIFSQAG-VTIGGGIQTDAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQY 243 (340)
Q Consensus 165 ~vs~~~~~~~~~~~-~~~~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 243 (340)
+|+...+....... ..+..+|++|+.+++|+|||||+|.+|+||||+++... .++..+++|+||++.+++++++|+++
T Consensus 151 ivs~~~r~~~~~~~~~~~~~~i~tda~i~~G~SGGPLv~~~G~vvGI~s~~~~-~~~~~g~~faIP~~~~~~~~~~l~~~ 229 (239)
T 1l1j_A 151 VVSATNRRIPKPDGSGYYVGLIQTDAAINPGNSGGPLLNIHGEVIGINTAIVN-PQEAVNLGFAIPINTVKKFLDTILTQ 229 (239)
T ss_dssp EEEEEEEEEECTTSSCEEEEEEEESSCCCTTTTTSEEECSSSEEEEEECCCSC-CCSCCSCEEEEEHHHHHHHHGGGCC-
T ss_pred EEeccccccccCCCccccCCEEEECCCCCCCCccHHhccCCCeEEEEEeeeec-CCCcCceEEEEEHHHHHHHHHHHHHC
Confidence 99988765322211 12346799999999999999999999999999998765 33346899999999999999999999
Q ss_pred CceeeeeeeE
Q 019504 244 GKVVRAGLNV 253 (340)
Q Consensus 244 ~~~~~~~lg~ 253 (340)
|++.|+|||+
T Consensus 230 g~v~r~~lGv 239 (239)
T 1l1j_A 230 KKVEKAYLGV 239 (239)
T ss_dssp ----------
T ss_pred CCCccceeCc
Confidence 9999999986
No 13
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=100.00 E-value=6.4e-37 Score=270.99 Aligned_cols=213 Identities=38% Similarity=0.534 Sum_probs=175.3
Q ss_pred hhHHHHHHHHhCCCeEEEEeeeeccccccCCcccccCCceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEec
Q 019504 20 EERIAQLFEKNTYSVVNIFDVTLRPTLNVTGLVEIPEGNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILAS 99 (340)
Q Consensus 20 ~~~~~~~~~~~~~svV~I~~~~~~~~~~~~~~~~~~~~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~ 99 (340)
..++.++++++.+|||+|......... .......+.||||+|+++||||||+||+.+.. .+.|.+.
T Consensus 19 ~~~~~~~~~~~~~sVV~I~~~~~~~~~---~~~~~~~~~GsG~ii~~~G~IlTaaHvv~~~~-----------~~~V~~~ 84 (237)
T 3lgi_A 19 PASYNLAVRRAAPAVVNVYNRGLNTNS---HNQLEIRTLGSGVIMDQRGYIITNKHVINDAD-----------QIIVALQ 84 (237)
T ss_dssp CCBCHHHHHHHGGGEEEEEEECCTTTC---TTSCCEEEEEEEEEEETTTEEEEEHHHHTTCS-----------EEEEECT
T ss_pred CcCHHHHHHHhCCcEEEEEEEecccCc---ccccccceEEEEEEEeCCCEEEEeeeecCCCC-----------EEEEEeC
Confidence 345678999999999999875543321 12223346799999999899999999999875 7899999
Q ss_pred CCceeEEEEEEEEeCCCCcEEEEEEecCCCCccceeecCCCCCCCCCEEEEEecCCCCCCceeEEEEeeeccccccCCCc
Q 019504 100 DGVQKNFEGKLVGADRAKDLAVLKIEASEDLLKPINVGQSSFLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQAGV 179 (340)
Q Consensus 100 ~g~~~~~~a~v~~~d~~~DlAlL~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~ 179 (340)
+|+ .++++++..|+.+|||||+++.+. .++++.|+++..++.|+.|+++|||++...+++.|+|+...+......
T Consensus 85 ~g~--~~~a~vv~~d~~~DlAll~l~~~~-~~~~~~l~~~~~~~~G~~v~~~G~p~~~~~~~~~g~vs~~~~~~~~~~-- 159 (237)
T 3lgi_A 85 DGR--VFEALLVGSDSLTDLAVLKINATG-GLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPT-- 159 (237)
T ss_dssp TSC--EEEEEEEEEETTTTEEEEECCCSS-CCCCCCCCTTCCCCTTBEEEEEECGGGSCSEEEEEEEEEECCSSCCTT--
T ss_pred CCC--EEEEEEEEEcCCCCEEEEEecCCC-CCceEeccCcccCCCCCEEEEEECCCCCCCcEEEEEEEecccccccCC--
Confidence 987 789999999999999999998764 368889987778899999999999999889999999998876543321
Q ss_pred eecceEEEeeccCCCCccceeecCCCcEEEEEeeeeeCCC---CcCceEEEEehHhHHHHHHHHHHcCceeeeee
Q 019504 180 TIGGGIQTDAAINPGNSGGPLLDSKGNLIGINTAIITQTG---TSAGVGFAIPSSTVLKIVPQLIQYGKVVRAGL 251 (340)
Q Consensus 180 ~~~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~---~~~~~~~aip~~~i~~~l~~l~~~~~~~~~~l 251 (340)
....++++|+.+++|+|||||||.+|+||||+++.+.... ...+++||||++.+++++++|+++|+..+.|+
T Consensus 160 ~~~~~i~~d~~i~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~g~~~aip~~~i~~~~~~l~~~g~~~~~~~ 234 (237)
T 3lgi_A 160 GRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRHHH 234 (237)
T ss_dssp SCSCCEEECSCCCTTCTTCEEECTTCCEEEEECCCCCCCTTSCCCCSCEEEEEHHHHHHHHHHHHHHSSCCC---
T ss_pred CcCCEEEEcCccCCCCchHHeeCCCCeEEEEEeeeeccCCCCcCcCceEEEEEHHHHHHHHHHHHHcCCCCCchh
Confidence 1235699999999999999999999999999999776532 35679999999999999999999999877654
No 14
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=100.00 E-value=2.3e-35 Score=259.79 Aligned_cols=208 Identities=36% Similarity=0.507 Sum_probs=166.0
Q ss_pred CCCCCCcchhHHHHHHHHhCCCeEEEEeeeeccccccCCcccccCCceEEEEEcCCCEEEeCccccCCCCCCCCCCCccE
Q 019504 12 PSGQLLPNEERIAQLFEKNTYSVVNIFDVTLRPTLNVTGLVEIPEGNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVV 91 (340)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~svV~I~~~~~~~~~~~~~~~~~~~~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~ 91 (340)
.+..+......+.++++++.+|||+|......+ +.......+.||||+|+++||||||+||+.+..
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~sVV~I~~~~~~~----~~~~~~~~~~GSG~iI~~~G~VLTaaHvv~~~~---------- 87 (231)
T 3tjo_A 22 DPNSLRHKYNFIADVVEKIAPAVVHIELFRKLP----FSKREVPVASGSGFIVSEDGLIVTNAHVVTNKH---------- 87 (231)
T ss_dssp CTTSHHHHSCHHHHHHHHHGGGEEEEEEEEECT----TSSCEEEEEEEEEEECSTTCEEEEETTTCCSSS----------
T ss_pred CCccccchhhHHHHHHHHhcCcEEEEEEEeccc----cCCCccccceEEEEEEeCCCEEEEchhcccCCc----------
Confidence 334444556788999999999999998754322 111122336799999998899999999998865
Q ss_pred EEEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecCCCCccceeecCCCCCCCCCEEEEEecCCCCCCceeEEEEeeecc
Q 019504 92 ARVNILASDGVQKNFEGKLVGADRAKDLAVLKIEASEDLLKPINVGQSSFLKVGQQCLAIGNPFGFDHTLTVGVISGLNR 171 (340)
Q Consensus 92 ~~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~~~~~~G~vs~~~~ 171 (340)
.+.|.+.+++ .++++++..|+.+|||||+++.+. .++++.|+++..++.|+.|+++|||++...+++.|+++...+
T Consensus 88 -~i~V~~~~g~--~~~a~v~~~d~~~DlAlL~l~~~~-~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~ 163 (231)
T 3tjo_A 88 -RVKVELKNGA--TYEAKIKDVDEKADIALIKIDHQG-KLPVLLLGRSSELRPGEFVVAIGSPFSLQNTVTTGIVSTTQR 163 (231)
T ss_dssp -EEEEECTTSC--EEEEEEEEEETTTTEEEEECCCSS-CCCCCCBCCGGGCCTTCEEEEEEEEETTEEEEEEEEEEECC-
T ss_pred -eEEEEcCCCC--EEEEEEEEecCCCCEEEEEecCCC-CCCceecCCcCCCCCCCEEEEEECCCCCCCceeeEEEeeccc
Confidence 8899999987 789999999999999999999653 478888987778899999999999999888899999998765
Q ss_pred ccccCC-CceecceEEEeeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 172 DIFSQA-GVTIGGGIQTDAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 172 ~~~~~~-~~~~~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
...... ......++++|+.+++|+|||||||.+|+||||+++... .+++||||++.++++++++++
T Consensus 164 ~~~~~~~~~~~~~~i~~da~i~~G~SGGPLv~~~G~vVGI~s~~~~-----~g~~~aip~~~i~~~l~~~~~ 230 (231)
T 3tjo_A 164 GGKELGLRNSDMDYIQTDAIINYGNAGGPLVNLDGEVIGINTLKVT-----AGISFAIPSDKIKKFLTESHD 230 (231)
T ss_dssp ------------CCEEESSCCCTTTTTSEEECTTSCEEEEEEEEEE-----TTEEEEEEHHHHHHHHHHHHT
T ss_pred cccccccCCCcccEEEEcCCcCCCCchhHeecCCCeEEEEEeEEec-----CCeEEEEEHHHHHHHHHHHhh
Confidence 422110 111125689999999999999999999999999998764 568999999999999999875
No 15
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=99.98 E-value=3e-31 Score=234.60 Aligned_cols=194 Identities=24% Similarity=0.305 Sum_probs=154.8
Q ss_pred HHHHHHhCCCeEEEEeeeeccccccCCcccccCCceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCce
Q 019504 24 AQLFEKNTYSVVNIFDVTLRPTLNVTGLVEIPEGNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQ 103 (340)
Q Consensus 24 ~~~~~~~~~svV~I~~~~~~~~~~~~~~~~~~~~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~ 103 (340)
.++++++.+|||+|....... ...+.||||+|+ +||||||+||+.+.. .+.|.+.++
T Consensus 34 ~~~~~~~~~svV~I~~~~~~~---------~~~~~GsG~iI~-~~~VlTaaH~v~~~~-----------~~~V~~~~~-- 90 (237)
T 3k6y_A 34 NPVVAATEPSVVKIRSLAPRC---------QKVLEGTGFVIS-PDRVMTNAHVVAGSN-----------NVTVYAGDK-- 90 (237)
T ss_dssp CHHHHHHGGGEEEEEEEEGGG---------TEEEEEEEEEEE-TTEEEECGGGTTTCS-----------EEEEEETTE--
T ss_pred HHHHHHhcCCEEEEEEEecCC---------CcceeEEEEEEE-CCEEEECHHHcCCCc-----------eEEEEECCc--
Confidence 678999999999998644222 123469999999 679999999998765 788888873
Q ss_pred eEEEEEEEEeCCCCcEEEEEEecCCCCccceeecCCCCCCCCCEEEEEecCCCCCCceeEEEEeeecccccc---CCCc-
Q 019504 104 KNFEGKLVGADRAKDLAVLKIEASEDLLKPINVGQSSFLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFS---QAGV- 179 (340)
Q Consensus 104 ~~~~a~v~~~d~~~DlAlL~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~~~~~~G~vs~~~~~~~~---~~~~- 179 (340)
.++++++..|+.+|||||+++.. .++++.|+ +..++.|+.++++|||++.......|.++...+.... ....
T Consensus 91 -~~~~~~v~~~~~~DiAll~l~~~--~~~~~~l~-~~~~~~G~~v~v~G~p~g~~~~~~~g~v~~~~~~~~~~~~~~~~~ 166 (237)
T 3k6y_A 91 -PFEATVVSYDPSVDVAILAVPHL--PPPPLVFA-AEPAKTGADVVVLGYPGGGNFTATPARIREAIRLSGPDIYGDPEP 166 (237)
T ss_dssp -EEECEEEEEETTTTEEEEECTTC--CSCCCCBC-SSCCCTTCEEEEEECGGGCSCEEEEEEEEEEEEEEECCTTCCSSC
T ss_pred -EEEEEEEEEcCCCCEEEEEeCCC--CCCceecC-CCCCCCCCEEEEEECCCCCCCccceeEEEeeEeecccccccCCCc
Confidence 68899999999999999999843 47888997 5678899999999999998888888888765432111 1111
Q ss_pred eecceEEEeeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHcCcee
Q 019504 180 TIGGGIQTDAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQYGKVV 247 (340)
Q Consensus 180 ~~~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~~~~~ 247 (340)
....++++++.+++|+|||||+|.+|+||||+++.... ..+++|+||++.++++++++.....+.
T Consensus 167 ~~~~~~~~~~~~~~GdSGGPLv~~~G~vvGI~s~~~~~---~~~~~~aip~~~v~~~l~~~~~~~~v~ 231 (237)
T 3k6y_A 167 VTRDVYTIRADVEQGDSGGPLIDLNGQVLGVVFGAAID---DAETGFVLTAGEVAGQLAKIGATQPVG 231 (237)
T ss_dssp EEEEEEEEESCCCTTCTTCEEECTTSCEEEEEEEECSS---STTEEEEEEHHHHHGGGGGTTCCSCCC
T ss_pred ccccEEEecCccCCCccHHHEECCCCEEEEEEEeeccC---CCcEEEEEEHHHHHHHHHHccCCCCCC
Confidence 33457899999999999999999999999999886543 357999999999999999985554443
No 16
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=99.92 E-value=5.5e-24 Score=176.18 Aligned_cols=138 Identities=22% Similarity=0.295 Sum_probs=102.1
Q ss_pred cCCceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecCCCCccce
Q 019504 55 PEGNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEGKLVGADRAKDLAVLKIEASEDLLKPI 134 (340)
Q Consensus 55 ~~~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~~~~~~~ 134 (340)
..+.||||+| +||||||+||+.+.. .+.|++ +++ .++|+++ .|+..||||||++.....++++
T Consensus 19 ~~~~GSGfii--~g~IlTn~HVV~~~~-----------~i~V~~-dg~--~~~a~vv-~d~~~DlAlLkv~~~~~~~~~l 81 (163)
T 2w5e_A 19 PEGKGTGFFS--GNDIVTAAHVVGNNT-----------FVNVCY-EGL--MYEAKVR-YMPEKDIAFITCPGDLHPTARL 81 (163)
T ss_dssp TTEEEEEEEE--TTEEEEEHHHHTTCS-----------EEEEEE-TTE--EEEEEEE-ECCSSSEEEEECCTTCCCSCCC
T ss_pred CceeEEEEEE--CCEEEecHHHhCCCc-----------eEEEEE-CCE--EEEEEEE-EECCCCEEEEEecCCCCCcceE
Confidence 3457999999 689999999999875 678888 775 7899999 8999999999999765345567
Q ss_pred eecCCCCCCCCCEEEEEecCCCCCCceeEEEEeeeccccccCCCceecceEEEeeccCCCCccceeecCCCcEEEEEeee
Q 019504 135 NVGQSSFLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSKGNLIGINTAI 214 (340)
Q Consensus 135 ~l~~~~~~~~G~~v~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~~~ 214 (340)
+|+++.. .+.|+++|+|.+. + .++..... . ....+.+++.+++|+|||||||.+|+||||+++.
T Consensus 82 ~l~~~~~---~~~v~~~G~p~~~---~---~~s~~~~~-~------~g~~~~~~a~i~pGnSGGPl~n~~G~VVGI~~~~ 145 (163)
T 2w5e_A 82 KLSKNPD---YSCVTVMAYVNED---L---VVSTAAAM-V------YGNTLSYAVRTQDGMSGAPVCDKYCRVLAVHQTN 145 (163)
T ss_dssp CBCSSCC---TTEEEEEEEETTE---E---EEEEEEEE-E------ETTEEEEECSCSSCCTTCEEECTTSCEEEEEEEE
T ss_pred EcCCCCC---CCEEEEEEeCCCC---E---EEEEeccE-E------cCCeEEEEEEeCCCCchhhEEcCCCEEEEEEccC
Confidence 7865433 4899999999662 1 11111111 0 1124778899999999999999999999999864
Q ss_pred eeCCCCcCceEEEEeh
Q 019504 215 ITQTGTSAGVGFAIPS 230 (340)
Q Consensus 215 ~~~~~~~~~~~~aip~ 230 (340)
.. ..+ +|+|..
T Consensus 146 ~g----~~g-g~ai~~ 156 (163)
T 2w5e_A 146 TG----YTG-GAVIID 156 (163)
T ss_dssp ET----TEE-EEEECC
T ss_pred cc----ccc-CEEEec
Confidence 32 233 666643
No 17
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=99.90 E-value=4.1e-23 Score=178.99 Aligned_cols=182 Identities=23% Similarity=0.319 Sum_probs=130.4
Q ss_pred CCCeEEEEeeeeccccccCCcccccCCceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEe----cCCceeEE
Q 019504 31 TYSVVNIFDVTLRPTLNVTGLVEIPEGNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILA----SDGVQKNF 106 (340)
Q Consensus 31 ~~svV~I~~~~~~~~~~~~~~~~~~~~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~----~~g~~~~~ 106 (340)
.+++|+|.... .+++........||||+|++ +||||||||+.+.... ..+.|.+ .++. .+
T Consensus 2 ~~~~~~i~~~~-----~~P~~v~~~~~~c~G~lI~~-~~VLTaaHcv~~~~~~--------~~i~v~~~~~~~~g~--~~ 65 (210)
T 2as9_A 2 EKNVTQVKDTN-----NFPYNGVVSFKDATGFVIGK-NTIITNKHVSKDYKVG--------DRITAHPNGDKGNGG--IY 65 (210)
T ss_dssp CCCEEECSCTT-----STTGGGEEECSSCEEEEEET-TEEEECHHHHHHCCTT--------CEEEESCCGGGCCSC--EE
T ss_pred CCceEEeecCC-----cCCeEEEEEeeeEEEEEEeC-CEEEECHhHCCccCCC--------CEEEEEeCcccCCCC--EE
Confidence 35677774321 12233222346799999996 6999999999754210 1455543 3554 56
Q ss_pred EE-EEEEeCCCCcEEEEEEecCC-----------CCccceeecCCCCCCCCCEEEEEecCCCCCCc----eeEEEEeeec
Q 019504 107 EG-KLVGADRAKDLAVLKIEASE-----------DLLKPINVGQSSFLKVGQQCLAIGNPFGFDHT----LTVGVISGLN 170 (340)
Q Consensus 107 ~a-~v~~~d~~~DlAlL~v~~~~-----------~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~~~----~~~G~vs~~~ 170 (340)
++ +++.+|+..|||||+++.+. ..++++.|+ ..+..|+.++++|||.+.... +..|+++...
T Consensus 66 ~~~~v~~~~~~~DiAll~l~~~~~~~~~~~~~~~~~v~~i~l~--~~~~~g~~v~v~G~p~~~~~~~~l~~~~g~v~~~~ 143 (210)
T 2as9_A 66 KIKSISDYPGDEDISVMNIEEQAVERGPKGFNFNENVQAFNFA--KDAKVDDKIKVIGYPLPAQNSFKQFESTGTIKRIK 143 (210)
T ss_dssp EEEEEEECSSSSSCEEEEECSEEEEEETTEEEGGGSCCCCCBC--SCCCTTCEEEEEECSSTTTTTSCCEEEEEEEEEEE
T ss_pred EEEEEEeCCCCCcEEEEEecCccccccccccccccccceeecC--CCCCCCCEEEEEeCCCCCCCCcceEEeeeEEcccc
Confidence 66 47888999999999998631 135677774 457889999999999865433 3667777542
Q ss_pred cccccCCCceecceEEEeeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 171 RDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 171 ~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
..++++++.+++|+|||||+|.+|+||||+++.....+ ....+|++|.+.|+++++...+
T Consensus 144 -----------~~~i~~~~~~~~GdSGGPlv~~~g~lvGI~s~g~~~~~-~~~~~~~~~~~~i~~f~~~~~~ 203 (210)
T 2as9_A 144 -----------DNILNFDAYIEPGNSGSPVLNSNNEVIGVVYGGIGKIG-SEYNGAVYFTPQIKDFIQKHIE 203 (210)
T ss_dssp -----------TTEEEEECCCCTTCTTCEEECTTSCEEEEECCSCCCTT-CSSEEEEECCHHHHHHHHTTCC
T ss_pred -----------CCeEEEcCccCCCCccCcEECCCCeEEEEEecccccCC-ccccccEEEcHHHHHHHHHhhh
Confidence 13578899999999999999989999999999776443 3567899999999999987543
No 18
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=99.88 E-value=4.6e-22 Score=176.12 Aligned_cols=163 Identities=21% Similarity=0.388 Sum_probs=117.5
Q ss_pred CceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCce-----------eEEEEEEEEeCC---CCcEEEE
Q 019504 57 GNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQ-----------KNFEGKLVGADR---AKDLAVL 122 (340)
Q Consensus 57 ~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~-----------~~~~a~v~~~d~---~~DlAlL 122 (340)
..|+||+|++ +||||||||+.+.... .+.+.+.+|.. ..+.++.+..|+ ..|||||
T Consensus 55 ~~c~G~lI~~-~~VLTAaHcv~~~~~~---------~~~v~~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~DiAll 124 (242)
T 1agj_A 55 TSATGVLIGK-NTVLTNRHIAKFANGD---------PSKVSFRPSINTDDNGNTETPYGEYEVKEILQEPFGAGVDLALI 124 (242)
T ss_dssp EEEEEEECSS-SEEEECHHHHGGGTTC---------GGGEEEEETCEECTTSCEECTTCCEEEEEEESCTTCTTSCCEEE
T ss_pred ccEEEEEEeC-CEEEEChhhcccCCCC---------ceEEEEecCccccccccccccCCceeEEEEEeCCCCCCCcEEEE
Confidence 3599999996 5999999999764310 12233323321 246778888887 8899999
Q ss_pred EEecCCC------CccceeecCCCCCCCCCEEEEEecCCCCCCc-eeEEEEeeeccccccCCCceecceEEEeeccCCCC
Q 019504 123 KIEASED------LLKPINVGQSSFLKVGQQCLAIGNPFGFDHT-LTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGN 195 (340)
Q Consensus 123 ~v~~~~~------~~~~~~l~~~~~~~~G~~v~~iG~p~g~~~~-~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~ 195 (340)
+++.+.. .++++.|+++..+..|+.++++|||.+...+ .....+.-.. ....+++++.+++|+
T Consensus 125 ~l~~~~~~~~~~~~v~~i~L~~~~~~~~g~~~~v~Gwg~~~~~~~l~~~~~~~~~----------~~~~~~~~~~~c~Gd 194 (242)
T 1agj_A 125 RLKPDQNGVSLGDKISPAKIGTSNDLKDGDKLELIGYPFDHKVNQMHRSEIELTT----------LSRGLRYYGFTVPGN 194 (242)
T ss_dssp EECCCTTSCCHHHHSCCCEECCSTTCCTTCEEEEEECCTTTSTTCCEEEEEEECC----------GGGSEEEECCCCGGG
T ss_pred EEcCCCccccccccccceecCccccCCCCCEEEEEeCCCCCCCccceeeeeeEec----------CCceEEEeCCcCCCC
Confidence 9997632 3688899766667899999999999775432 3333232111 012367889999999
Q ss_pred ccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehH-hHHHHHHH
Q 019504 196 SGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSS-TVLKIVPQ 239 (340)
Q Consensus 196 SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~-~i~~~l~~ 239 (340)
|||||++.+|+||||+++.........+.+|++|+. .+++++++
T Consensus 195 SGGPl~~~~g~lvGI~s~g~~c~~~~~~~~~~~~i~~~~~~~l~~ 239 (242)
T 1agj_A 195 SGSGIFNSNGELVGIHSSKVSHLDREHQINYGVGIGNYVKRIINE 239 (242)
T ss_dssp TTCEEECTTSEEEEEEEEEEECSSTTCEEEEEEECCHHHHHHHHH
T ss_pred CchHhcccCCEEEEEEeccccccCcCCCceeeEEehHHHHHHHHh
Confidence 999999989999999999876433346789999995 78888775
No 19
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...
Probab=99.86 E-value=5.7e-21 Score=163.46 Aligned_cols=158 Identities=20% Similarity=0.220 Sum_probs=121.0
Q ss_pred ceEEEEEcCC--CEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEEEEEEeC-CCCcEEEEEEecCCCCccce
Q 019504 58 NGSGVVWDGK--GHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEGKLVGAD-RAKDLAVLKIEASEDLLKPI 134 (340)
Q Consensus 58 ~GsGfiI~~~--G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a~v~~~d-~~~DlAlL~v~~~~~~~~~~ 134 (340)
..+||++.+. +|||||+||+.... .+. .++ .+.++++..| +..|+||||++.+....+.+
T Consensus 17 CT~Gf~v~~~~~~~ilTa~Hc~~~~~-----------~v~---~~~---~~~g~vv~~~~~~~D~Avi~i~~~~~~~~~v 79 (198)
T 2h5c_A 17 CSVGFSVTRGATKGFVTAGHCGTVNA-----------TAR---IGG---AVVGTFAARVFPGNDRAWVSLTSAQTLLPRV 79 (198)
T ss_dssp EECCEEEEETTEEEEEECGGGCCTTC-----------EEE---ETT---EEEEEEEEEECSBSCEEEEEECTTSEEEEEE
T ss_pred CCcCEEEecCCeeEEEECcccCCCCC-----------EEE---eCC---cEEEEEEecCCCCCCEEEEEeCCCCccCceE
Confidence 4689999653 69999999998754 444 444 5789999999 99999999998753212222
Q ss_pred -------eecCCCCCCCCCEEEEEecCCCCCCceeEEEEeeeccccccCCCceecceEEEeeccCCCCccceeecCCCcE
Q 019504 135 -------NVGQSSFLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSKGNL 207 (340)
Q Consensus 135 -------~l~~~~~~~~G~~v~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d~~G~V 207 (340)
.+.....+++|+.|+.+|+|.+ ++.|+|+.+++......+ .+.+++++++.+++|+|||||+|.+|++
T Consensus 80 ~~~g~~~~v~g~~~~~vG~~V~~~G~~tg----~t~G~V~~~~~~~~~~~g-~~~~~i~t~~~~~~GDSGGPl~~~~g~~ 154 (198)
T 2h5c_A 80 ANGSSFVTVRGSTEAAVGAAVCRSGRTTG----YQCGTITAKNVTANYAEG-AVRGLTQGNACMGRGDSGGSWITSAGQA 154 (198)
T ss_dssp EETTEEEECCBCCCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEETTE-EEEEEEEECSCCBTTCTTCEEECTTCBE
T ss_pred ecCCceEEecCcccCCCCCeEEEeecCcc----eEEEEEEeeeeEEEeCCC-eEeeeEEecccCCCCcceeEEEeeCCEE
Confidence 3445667899999999999876 689999998875432222 2456799999999999999999999999
Q ss_pred EEEEeeee-eCC-C-----CcCceEEEEehHhHHHHH
Q 019504 208 IGINTAII-TQT-G-----TSAGVGFAIPSSTVLKIV 237 (340)
Q Consensus 208 VGi~~~~~-~~~-~-----~~~~~~~aip~~~i~~~l 237 (340)
|||+++.. ... + ...+++|++|++.+++.+
T Consensus 155 vGI~s~~~~~~~~~~c~~~~~~g~~f~~Pi~~vl~~~ 191 (198)
T 2h5c_A 155 QGVMSGGNVQSNGNNCGIPASQRSSLFERLQPILSQY 191 (198)
T ss_dssp EEEEEEECCCTTSBSTTSCGGGCCEEEEEHHHHHHHH
T ss_pred EEEEEeecCccCCCccccccCCceEEEEEHHHHHHHC
Confidence 99999873 211 1 234689999998887654
No 20
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=99.84 E-value=4.8e-21 Score=164.55 Aligned_cols=159 Identities=28% Similarity=0.362 Sum_probs=110.3
Q ss_pred CceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEe----cCCceeEEEE-EEEEeCCCCcEEEEEEecCC---
Q 019504 57 GNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILA----SDGVQKNFEG-KLVGADRAKDLAVLKIEASE--- 128 (340)
Q Consensus 57 ~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~----~~g~~~~~~a-~v~~~d~~~DlAlL~v~~~~--- 128 (340)
..|+||+|++ +||||||||+.+..... ..+.+.+ .++. .+++ +++.+|+..|||||+++.+.
T Consensus 22 ~~c~G~lI~~-~~VLTaaHcv~~~~~~~-------~~v~v~~~~~~~~~~--~~~~~~i~~~~~~~DiAll~l~~~~~~~ 91 (200)
T 2w7s_A 22 VGGTGVVVGK-NTIVTNKHIAKSNDIFK-------NRVSAHHSSKGKGGG--NYDVKDIVEYPGKEDLAIVHVHETSTEG 91 (200)
T ss_dssp TTEEEEEEET-TEEEECHHHHHHHHHTT-------CCEEETCCSSSCCCC--EECEEEEEECSSSSSCEEEEECSBCTTS
T ss_pred ceEEEEEEEC-CEEEEChhhcCCcccCC-------cEEEEEecCccCCCc--EEEEEEEecCCCcceEEEEEECCCCCCc
Confidence 4699999996 59999999996532100 1344433 3443 4555 57788999999999998751
Q ss_pred ----CCccceeecCCCCCCCCCEEEEEecCCCCCCc----eeEEEEeeeccccccCCCceecceEEEeeccCCCCcccee
Q 019504 129 ----DLLKPINVGQSSFLKVGQQCLAIGNPFGFDHT----LTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPL 200 (340)
Q Consensus 129 ----~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~~~----~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl 200 (340)
..++++.|+ ..+..|+.++++|||++.... +..|+++... ..++++++.+++|+|||||
T Consensus 92 ~~~~~~v~pi~l~--~~~~~g~~v~v~G~p~g~~~~~~~~~~~g~v~~~~-----------~~~~~~~~~~~~GdSGGPl 158 (200)
T 2w7s_A 92 LNFNKNVSYTKFA--DGAKVKDRISVIGYPKGAQTKYKMFESTGTINHIS-----------GTFMEFDAYAQPGNSGSPV 158 (200)
T ss_dssp CBGGGSCCCCCBC--CCCCTTCEEEEEECTTHHHHTSCEEEEEEEEEEEE-----------TTEEEECSCCCTTCTTCEE
T ss_pred ccccccccceecc--ccCCCCCEEEEEECCCCCCCccceEEeEEEEEccC-----------CCEEEEcceeCCCCccCeE
Confidence 135677774 356789999999999864322 3567776532 1347888999999999999
Q ss_pred ecCCCcEEEEEeeeeeCCCCcCceEEEE-ehHhHHHHHHHH
Q 019504 201 LDSKGNLIGINTAIITQTGTSAGVGFAI-PSSTVLKIVPQL 240 (340)
Q Consensus 201 ~d~~G~VVGi~~~~~~~~~~~~~~~~ai-p~~~i~~~l~~l 240 (340)
++.+|+||||+++...... ...++++ +...+++|+++.
T Consensus 159 ~~~~g~lvGI~s~g~~~~~--~~~~~~v~~~~~~~~wI~~~ 197 (200)
T 2w7s_A 159 LNSKHELIGILYAGSGKDE--SEKNFGVYFTPQLKEFIQNN 197 (200)
T ss_dssp ECTTSCEEEEEEEEC------CCCEEEEECCHHHHHHHHHT
T ss_pred ECcCCEEEEEEeccccCCC--CccceeeecHHHHHHHHHhh
Confidence 9989999999998754311 2234555 446677777653
No 21
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=99.83 E-value=1.5e-19 Score=162.77 Aligned_cols=162 Identities=23% Similarity=0.307 Sum_probs=115.1
Q ss_pred CceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEe--------cCCceeEEEEEEEEeCCCCcEEEEEEecCC
Q 019504 57 GNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILA--------SDGVQKNFEGKLVGADRAKDLAVLKIEASE 128 (340)
Q Consensus 57 ~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~--------~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~ 128 (340)
..|+||+|+++ ||||||||+...... . ..+.|++ .++. ...++++..+...|||||+++.+.
T Consensus 34 ~~C~G~lI~~~-~VLTAAHCv~~~~~~---~----~~i~V~~G~~~~~~~~~g~--~~~~~i~~~~~~~DIALLkL~~~~ 103 (274)
T 2o8l_A 34 FIASGVVVGKD-TLLTNKHVVDATHGD---P----HALKAFPSAINQDNYPNGG--FTAEQITKYSGEGDLAIVKFSPNE 103 (274)
T ss_dssp EEEEEEEEETT-EEEECHHHHHTTTTC---G----GGEEEEETCCBTTBCTTCC--EEEEEEEECSSSSCCEEEEECCCT
T ss_pred EEEEEEEEECC-EEEEChhhCcccCCC---c----ceEEEEecccCcccccCcc--EEEEEEEeCCCCCcEEEEEecCcc
Confidence 35999999976 999999999764310 0 0244432 3342 345667777888999999998752
Q ss_pred ------CCccceeecCCCCCCCCCEEEEEecCCCCCCc---eeEEEEeeeccccccCCCceecceEEEeeccCCCCccce
Q 019504 129 ------DLLKPINVGQSSFLKVGQQCLAIGNPFGFDHT---LTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGP 199 (340)
Q Consensus 129 ------~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~~~---~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGP 199 (340)
..+.++.|+....+..|+.++++|||.+.... ...|.++... ..++++++.+++|+||||
T Consensus 104 ~~~~~~~~v~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~-----------~~~i~~~~~~c~GdSGGP 172 (274)
T 2o8l_A 104 QNKHIGEVVKPATMSNNAETQTNQNITVTGYPGDKPVATMWESKGKITYLK-----------GEAMQYDLSTTGGNSGSP 172 (274)
T ss_dssp TSCCTTTSSCCCEECCCTTCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEE-----------TTEEEESCCCCTTCTTCE
T ss_pred cccccccccccccccccccccCCCEEEEEECCCCCCCceEEecCceEEecC-----------CCeEEeCcccCCCCchhh
Confidence 35788999765567889999999999764322 2445554331 134788999999999999
Q ss_pred eecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHc
Q 019504 200 LLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQY 243 (340)
Q Consensus 200 l~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 243 (340)
||+.+|+||||++++.... .+.++++. ..++.|+++.++.
T Consensus 173 Lv~~~g~lvGIvS~G~~~~---~~~~~~~~-~~~~~wI~~~i~~ 212 (274)
T 2o8l_A 173 VFNEKNEVIGIHWGGVPNE---FNGAVFIN-ENVRNFLKQNIED 212 (274)
T ss_dssp EECTTSCEEEEEEEEETTT---EEEEEECC-HHHHHHHHHHCTT
T ss_pred eeccCCeEEEEEeCcccCC---CCceEEec-HHHHHHHHHHHhh
Confidence 9998999999999876432 23455553 5677888776543
No 22
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=99.82 E-value=3.1e-19 Score=160.21 Aligned_cols=162 Identities=24% Similarity=0.313 Sum_probs=114.6
Q ss_pred CceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEe--------cCCceeEEEEEEEEeCCCCcEEEEEEecCC
Q 019504 57 GNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILA--------SDGVQKNFEGKLVGADRAKDLAVLKIEASE 128 (340)
Q Consensus 57 ~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~--------~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~ 128 (340)
..|+||+|+++ ||||||||+....... ..+.|++ .++. ...++++..+..+|||||+++.+.
T Consensus 34 ~~CgG~lI~~~-~VLTAAHCv~~~~~~~-------~~i~V~~G~~~~~~~~~g~--~~~~~i~~~~~~~DIALLkL~~~~ 103 (268)
T 1wcz_A 34 FIASGVVVGKD-TLLTNKHVVDATHGDP-------HALKAFPSAINQDNYPNGG--FTAEQITKYSGEGDLAIVKFSPNE 103 (268)
T ss_dssp EEEEEEECSSS-EEEECHHHHGGGTTCG-------GGEEEEETCCBTTBCTTCC--EEEEEEEECSSSSCCEEEEECCCT
T ss_pred EEEEEEEEECC-EEEEChhhCCCccCCc-------ceEEEEecccCcccccCCc--EEEEEEecCCCCCcEEEEEecCcc
Confidence 35999999975 9999999997543100 0244433 2332 345667777888999999998763
Q ss_pred ------CCccceeecCCCCCCCCCEEEEEecCCCCCCc---eeEEEEeeeccccccCCCceecceEEEeeccCCCCccce
Q 019504 129 ------DLLKPINVGQSSFLKVGQQCLAIGNPFGFDHT---LTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGP 199 (340)
Q Consensus 129 ------~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~~~---~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGP 199 (340)
..+.++.|.....+..|+.++++|||.+.... ...++++... ..++++++.+|+|+||||
T Consensus 104 ~~~~~~~~v~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~-----------~~~i~~~~~~c~GdSGGP 172 (268)
T 1wcz_A 104 QNKHIGEVVKPATMSNNAETQVNQNITVTGYPGDKPVATMWESKGKITYLK-----------GEAMQYDLSTTGGNSGSP 172 (268)
T ss_dssp TSCCHHHHSCCCCBCCCSSCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEE-----------TTEEEESBCCCTTCTTCE
T ss_pred cccccccccceeecccccccCCCCEEEEEECCCCCCCceEEeecceEEeeC-----------CCeEEEecccCCCCccCe
Confidence 23678888765567889999999999764322 2445555432 135788899999999999
Q ss_pred eecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHc
Q 019504 200 LLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQY 243 (340)
Q Consensus 200 l~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 243 (340)
|++.+|+||||++++... . .+.++++. ..++.|+++.++.
T Consensus 173 Lv~~~g~lvGIvS~G~~~-~--~~~~~~~~-~~~~~wI~~~i~~ 212 (268)
T 1wcz_A 173 VFNEKNEVIGIHWGGVPN-E--FNGAVFIN-ENVRNFLKQNIED 212 (268)
T ss_dssp EECTTSCEEEEEEEEETT-T--EEEEEECC-HHHHHHHHHHCTT
T ss_pred EEccCCEEEEEEeCCccC-C--cceeEEcC-HHHHHHHHHHHHh
Confidence 999899999999987642 2 23556664 6678888776643
No 23
>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}
Probab=99.82 E-value=4.5e-19 Score=150.45 Aligned_cols=155 Identities=21% Similarity=0.243 Sum_probs=117.4
Q ss_pred ceEEEEEc-CCC--EEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEEEEEEeC-CCCcEEEEEEecCCCCccc
Q 019504 58 NGSGVVWD-GKG--HIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEGKLVGAD-RAKDLAVLKIEASEDLLKP 133 (340)
Q Consensus 58 ~GsGfiI~-~~G--~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a~v~~~d-~~~DlAlL~v~~~~~~~~~ 133 (340)
..+||++. ++| |||||+||+.... .+. +.| +.++++..| +..|+||||++.+....+.
T Consensus 15 CTsGf~v~~~~G~~~ilTa~Hc~~~g~-----------~v~--~~d-----~~g~v~~~~~p~~DiAlikl~~~~~~~~~ 76 (188)
T 2oua_A 15 CSVGFAATNASGQPGFVTAGHCGSVGT-----------QVS--IGN-----GRGVFERSVFPGNDAAFVRGTSNFTLTNL 76 (188)
T ss_dssp EECCEEEECTTCCEEEEECGGGCCTTC-----------EEE--ETT-----EEEEEEEEECSBSCEEEEEEEESCEEEEE
T ss_pred EecCEEEEeCCCCEEEEECcccCCCCC-----------EEE--ecC-----ceEEEEeeCCCCCCEEEEEeCCCCccccc
Confidence 47899995 478 9999999997543 332 333 678999999 9999999999876421222
Q ss_pred ---------eeecCCCCCCCCCEEEEEecCCCCCCceeEEEEeeeccccccCCCceecceEEEeeccCCCCccceeecCC
Q 019504 134 ---------INVGQSSFLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSK 204 (340)
Q Consensus 134 ---------~~l~~~~~~~~G~~v~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d~~ 204 (340)
+++..+..+++|+.|+.+|+|.+ .+.|+|+.+++......+ .+.++++++..+.+|+|||||+. +
T Consensus 77 v~~~g~~~~~~l~~~~~~~vG~~v~~~G~~tG----~t~G~v~~~~~~v~~~~~-~~~~~~~~~~~~~~GDSGgpl~~-~ 150 (188)
T 2oua_A 77 VSRYNSGGYATVSGSSTAPIGSQVCRSGSTTG----WYCGTIQARNQTVSYPQG-TVHSLTRTSVCAEPGDSGGSFIS-G 150 (188)
T ss_dssp EECGGGCSEEECCBCCCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEETTE-EEEEEEEESCCCCTTCTTCEEEE-T
T ss_pred eeecCCcceEeccCccCCCCCCeEEEEEcCCC----eEEEEEEEEeeEEEeCCC-cEeeeEeeeeecCCCCccceEEE-C
Confidence 34666677899999999999976 578999988875432222 33456888888899999999994 8
Q ss_pred CcEEEEEeeeeeCCCCcCceEEEEehHhHHHHH
Q 019504 205 GNLIGINTAIITQTGTSAGVGFAIPSSTVLKIV 237 (340)
Q Consensus 205 G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l 237 (340)
|+++||+++....+. ..+++|++|++.+++.+
T Consensus 151 ~~~vGi~s~~~~~~~-~~~~~~~~pi~~~l~~~ 182 (188)
T 2oua_A 151 TQAQGVTSGGSGNCR-TGGTTFYQEVNPMLNSW 182 (188)
T ss_dssp TEEEEEEEEEEEETT-TEEEEEEEESHHHHHHT
T ss_pred CEEEEEEeccCCCCC-CCCceEEEEHHHHHHHc
Confidence 999999998754332 35689999998877653
No 24
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=99.81 E-value=2.8e-19 Score=153.81 Aligned_cols=160 Identities=23% Similarity=0.386 Sum_probs=109.5
Q ss_pred CceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEE----ecCCceeEEE-EEEEEeCCCCcEEEEEEecCC---
Q 019504 57 GNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNIL----ASDGVQKNFE-GKLVGADRAKDLAVLKIEASE--- 128 (340)
Q Consensus 57 ~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~----~~~g~~~~~~-a~v~~~d~~~DlAlL~v~~~~--- 128 (340)
+.|+||+|+++ ||||||||+.+.... ..+.+. ..++. .+. ++++.++...|||||+++.+.
T Consensus 22 ~~c~G~lI~~~-~VLTaaHcv~~~~~~--------~~v~v~~~~~~~~~~--~~~~~~i~~~~~~~DiAll~l~~~~~~~ 90 (204)
T 2vid_A 22 KSATGFVVGKN-TILTNKHVSKNYKVG--------DRITAHPNSDKGNGG--IYSIKKIINYPGKEDVSVIQVEERAIER 90 (204)
T ss_dssp SSCEEEEEETT-EEEECHHHHTTCCTT--------CEEEESCCSSSCCSC--EEEEEEEEECSSSSCCEEEEECSEEEEE
T ss_pred eeEEEEEEECC-EEEEChhHCCCccCC--------ceEEEEeccccCCCc--EEEeeEEecCCCCCeEEEEEEcCccccc
Confidence 46999999976 999999999764310 033332 12343 344 567778889999999998531
Q ss_pred --------CCccceeecCCCCCCCCCEEEEEecCCCCCC----ceeEEEEeeeccccccCCCceecceEEEeeccCCCCc
Q 019504 129 --------DLLKPINVGQSSFLKVGQQCLAIGNPFGFDH----TLTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNS 196 (340)
Q Consensus 129 --------~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~~----~~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~S 196 (340)
..+.++.|+. .+..|+.++++|||.+... ....|.++... ..++.+++..++|+|
T Consensus 91 ~~~~~~~~~~v~pi~l~~--~~~~g~~~~~~G~g~~~~~~~~~~~~~g~v~~~~-----------~~~~~~~~~~~~GdS 157 (204)
T 2vid_A 91 GPKGFNFNDNVTPFKYAA--GAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVE-----------GSSIVYSAHTESGNS 157 (204)
T ss_dssp ETTEEEHHHHCCCCCBCS--CCCTTCEEEEEECCCCCC--CCCEEEEEEEEEEE-----------TTEEEECCCCCGGGT
T ss_pred ccccccccccccccccCC--cCCCCCEEEEEeCCCCCCCCcceEeeccEEeecc-----------CCeEEEecccCCCCc
Confidence 1246777753 5678999999999976543 24456665532 134788889999999
Q ss_pred cceeecCCCcEEEEEeeeeeCCCCcCceEEEE-ehHhHHHHHHHHH
Q 019504 197 GGPLLDSKGNLIGINTAIITQTGTSAGVGFAI-PSSTVLKIVPQLI 241 (340)
Q Consensus 197 GGPl~d~~G~VVGi~~~~~~~~~~~~~~~~ai-p~~~i~~~l~~l~ 241 (340)
||||++.+|+||||+++....+. ....+|++ +...+++|+++.+
T Consensus 158 GGPl~~~~g~lvGI~s~g~~~~~-~~~~~~~~~~~~~~~~wI~~~~ 202 (204)
T 2vid_A 158 GSPVLNSNNELVGIHFASDVKND-DNRNAYGVYFTPEIKKFIAENI 202 (204)
T ss_dssp TCEEECTTSCEEEEEEEECC----CCCCEEEECCCHHHHHHHHHHS
T ss_pred cCcEECCCCeEEEEEecCccCCC-cccccceeEeCHHHHHHHHhhc
Confidence 99999989999999998753111 12334544 3466788877643
No 25
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...
Probab=99.80 E-value=7.7e-19 Score=148.96 Aligned_cols=161 Identities=20% Similarity=0.265 Sum_probs=113.5
Q ss_pred ceE-EEEEcC--CCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEEEEEEeC-CCCcEEEEEEec-CC---C
Q 019504 58 NGS-GVVWDG--KGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEGKLVGAD-RAKDLAVLKIEA-SE---D 129 (340)
Q Consensus 58 ~Gs-GfiI~~--~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a~v~~~d-~~~DlAlL~v~~-~~---~ 129 (340)
.+| ||++.. ++|||||+||+.... .+.+...++. . .+++.+.+ +..||||||++. +. .
T Consensus 13 ~ct~Gf~v~~~~~~~ilTaaHcv~~~~-----------~~~v~~~~~~--~-~g~~~~~~~~~~DiAll~l~~~~~~~~~ 78 (185)
T 2qa9_E 13 RCSLGFNVRSGSTYYFLTAGHCTDGAT-----------TWWANSARTT--V-LGTTSGSSFPNNDYGIVRYTNTTIPKDG 78 (185)
T ss_dssp EEECCEEEEETTEEEEEECHHHHTTCS-----------EEESSTTSCS--E-EEEEEEEECSBSCEEEEEECCSSSCCCC
T ss_pred cEeccEEEEECCceEEEECcccCCCCC-----------cEEecCCCce--E-eEEEeccccCCCCEEEEEecCCCccccC
Confidence 355 999963 469999999998764 5555443332 2 34556666 889999999987 32 2
Q ss_pred CccceeecCCCCCCCCCEEEEEecCCCCCCceeEEEEeeeccccccCCCceecceEEEeeccCCCCccceeecCCCcEEE
Q 019504 130 LLKPINVGQSSFLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSKGNLIG 209 (340)
Q Consensus 130 ~~~~~~l~~~~~~~~G~~v~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d~~G~VVG 209 (340)
.++++.+.....+..|+.++++||+.+ .+.+.++.+...........+...++++...++|+|||||++. ++++|
T Consensus 79 ~v~~~~l~~~~~~~~g~~v~~~Gw~~~----~~~g~l~~~~~~v~~~~~~~~~~~~~~~~cac~GDSGGPlv~~-~~~vG 153 (185)
T 2qa9_E 79 TVGGQDITSAANATVGMAVTRRGSTTG----THSGSVTALNATVNYGGGDVVYGMIRTNVCAEPGDSGGPLYSG-TRAIG 153 (185)
T ss_dssp EETTEECCEECCCCTTCEEEEEETTTE----EEEEEEEEEEEEEECSTTCEEEEEEEESCCCCTTCTTCEEEET-TEEEE
T ss_pred ccceeeeCCcccCCCCCEEEEecCCCc----eeEeEEEEEEEEEEcCCCCEEeceEEecccCCCCCccceEEEC-CEEEE
Confidence 345677754456788999999999754 4577777665433211111233457777888999999999986 49999
Q ss_pred EEeeeeeCCCCcCceEEEEehHhHHHHHH
Q 019504 210 INTAIITQTGTSAGVGFAIPSSTVLKIVP 238 (340)
Q Consensus 210 i~~~~~~~~~~~~~~~~aip~~~i~~~l~ 238 (340)
|+++....+. ....+++.|++.++++++
T Consensus 154 I~s~g~~~~~-~~~p~vyt~v~~~~~wI~ 181 (185)
T 2qa9_E 154 LTSGGSGNCS-SGGTTFFQPVTEALSAYG 181 (185)
T ss_dssp EEEEEEEETT-TEEEEEEEEHHHHHHHHT
T ss_pred EEEecCCCCC-CCCcEEEEEHHHHHHhhC
Confidence 9999764332 346789999999988874
No 26
>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1
Probab=99.80 E-value=1.1e-18 Score=148.19 Aligned_cols=158 Identities=18% Similarity=0.229 Sum_probs=114.6
Q ss_pred ceEEEEEcCC--CEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEEEEEEeC-CCCcEEEEEEecCCCCccce
Q 019504 58 NGSGVVWDGK--GHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEGKLVGAD-RAKDLAVLKIEASEDLLKPI 134 (340)
Q Consensus 58 ~GsGfiI~~~--G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a~v~~~d-~~~DlAlL~v~~~~~~~~~~ 134 (340)
..+||+++++ +|||||+||+.... .+. ..++. ...+++...+ +..|+||||++.+....+.+
T Consensus 14 CT~Gfiv~~~g~~~ilT~~Hv~~~~~-----------~v~--~~~~~--~~~g~~~~~~~~~~DiAlikl~~~~~~~~~v 78 (187)
T 1hpg_A 14 CSAAFNVTKGGARYFVTAGHCTNISA-----------NWS--ASSGG--SVVGVREGTSFPTNDYGIVRYTDGSSPAGTV 78 (187)
T ss_dssp EECCEEEEETTEEEEEECHHHHTTCS-----------EEE--SSTTC--CEEEEEEEEECSBSCEEEEEECSSCCCCSEE
T ss_pred CcceEEEEECCeeEEEECcccCCCCC-----------eEE--eCCCc--eeEEEEeCccCCCCCEEEEEeCCCCCcCceE
Confidence 3569999765 49999999998764 433 34553 2335555555 77899999998743222333
Q ss_pred e--------ecCCCCCCCCCEEEEEecCCCCCCceeEEEEeeeccccccCCCceecceEEEeeccCCCCccceeecCCCc
Q 019504 135 N--------VGQSSFLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSKGN 206 (340)
Q Consensus 135 ~--------l~~~~~~~~G~~v~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d~~G~ 206 (340)
. +..+..+++|+.|+.+|+|.+ .+.|+|+.+++...... ..+.+++++++.+++|+|||||++. ++
T Consensus 79 ~~~~g~~~~i~~~~~~~~G~~v~~~G~~~g----~t~G~v~~~~~~v~~~~-~~~~~~i~t~~~~~~GdSGgpl~~~-~~ 152 (187)
T 1hpg_A 79 DLYNGSTQDISSAANAVVGQAIKKSGSTTK----VTSGTVTAVNVTVNYGD-GPVYNMVRTTACSAGGDSGGAHFAG-SV 152 (187)
T ss_dssp ECSSSCEEECCEECCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEETT-EEEEEEEEECCCCCTTCTTCEEEET-TE
T ss_pred EecCCceeeeccccCCCCCCEEEEEEcCCC----EeEEEEEEeEEEEEeCC-CeEeeeEEeccccCCCCCCCeEEEC-CE
Confidence 3 334567899999999999875 68899998876543222 2245679999999999999999986 59
Q ss_pred EEEEEeeeeeCCCCcCceEEEEehHhHHHHH
Q 019504 207 LIGINTAIITQTGTSAGVGFAIPSSTVLKIV 237 (340)
Q Consensus 207 VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l 237 (340)
++||+++....+. ..+.+|++|++.+++.+
T Consensus 153 ~vGi~s~~~~~~~-~~~~~~~~~i~~~~~~l 182 (187)
T 1hpg_A 153 ALGIHSGSSGCSG-TAGSAIHQPVTEALSAY 182 (187)
T ss_dssp EEEEEEEESCCBT-TBCCCEEEEHHHHHHHH
T ss_pred EEEEEEeeCCCCC-CCCceEEEEHHHHHHHc
Confidence 9999998654332 24688999998877654
No 27
>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}
Probab=99.78 E-value=5.5e-18 Score=143.73 Aligned_cols=151 Identities=25% Similarity=0.390 Sum_probs=113.0
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEEEEEEeC-CCCcEEEEEEecCCCCcc----
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEGKLVGAD-RAKDLAVLKIEASEDLLK---- 132 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a~v~~~d-~~~DlAlL~v~~~~~~~~---- 132 (340)
.-+||+++. +||||+||+.... .+. ..| +++++.| +..|+||||++.+....+
T Consensus 17 CT~Gf~~~~--~ilTa~Hc~~~~~-----------~v~--~~d-------g~v~~~~~~~~DiAlikl~~~~~~~~~v~~ 74 (189)
T 2ea3_A 17 CSIGFAVNG--GFITAGHCGRTGA-----------TTA--NPT-------GTFAGSSFPGNDYAFVRTGAGVNLLAQVNN 74 (189)
T ss_dssp EECCEEETT--EEEECGGGCCTTC-----------EEE--TTT-------EEEEEEECSBSCEEEEEECTTCEEEEEEEC
T ss_pred CccCEEccC--eEEEchhcCCCCC-----------EEE--eCC-------cEEEeeCCCCCCEEEEEECCCCccccceEe
Confidence 467999974 9999999998754 433 333 5677888 889999999987532112
Q ss_pred ----ceeecCCCCCCCCCEEEEEecCCCCCCceeEEEEeeeccccccCCCceecceEEEeeccCCCCccceeecCCCcEE
Q 019504 133 ----PINVGQSSFLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSKGNLI 208 (340)
Q Consensus 133 ----~~~l~~~~~~~~G~~v~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d~~G~VV 208 (340)
++.+..+..+++|+.|+.+|+|.+ .+.|+|+.+++......+ .+.++++++..+.+|+|||||++ +|+++
T Consensus 75 ~~g~~v~l~~s~~~~vG~~v~~~G~~tG----~t~G~Vs~~~~~v~~~~~-~~~~~~~~~~~~~~GDSGgpl~~-~~~~v 148 (189)
T 2ea3_A 75 YSGGRVQVAGHTAAPVGSAVCRSGSTTG----WHCGTITALNSSVTYPEG-TVRGLIRTTVCAEPGDSGGSLLA-GNQAQ 148 (189)
T ss_dssp SSSCEEECCBCCCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEETTE-EEEEEEEESCCCCTTCTTCEEEE-TTEEE
T ss_pred cCCceeecCCCcCCCCCCEEEEEEeCCc----cEEEEEEecceEEEeCCc-cCcceEEeeeeccCCCccCeEEE-CCEEE
Confidence 335666677899999999999876 578999888765432211 23356888888999999999996 89999
Q ss_pred EEEeeeeeCCCCcCceEEEEehHhHHHHH
Q 019504 209 GINTAIITQTGTSAGVGFAIPSSTVLKIV 237 (340)
Q Consensus 209 Gi~~~~~~~~~~~~~~~~aip~~~i~~~l 237 (340)
||+++....+. ..+.+|++|++.+++.+
T Consensus 149 Gi~s~~~~~c~-~~~~~~~~pi~~~l~~~ 176 (189)
T 2ea3_A 149 GVTSGGSGNCR-TGGTTFFQPVNPILQAY 176 (189)
T ss_dssp EEEEEEEEETT-TEEEEEEEEHHHHHHHH
T ss_pred EEEeecCCCCC-CCCcEEEEEHHHHHHHC
Confidence 99998764333 24689999998877654
No 28
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=99.78 E-value=3.9e-19 Score=157.66 Aligned_cols=138 Identities=26% Similarity=0.408 Sum_probs=97.1
Q ss_pred CceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC--c--------eeEEEEEEEEeCC---CCcEEEEE
Q 019504 57 GNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG--V--------QKNFEGKLVGADR---AKDLAVLK 123 (340)
Q Consensus 57 ~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g--~--------~~~~~a~v~~~d~---~~DlAlL~ 123 (340)
..|+||+|+++ ||||||||+.+.... . ..+.+..... . ...+.++.+..|+ .+|||||+
T Consensus 48 ~~c~G~lI~~~-~VLTAaHcv~~~~~~-----~--~~v~v~~G~~~~~~~~~~~~~~~~~~~~~i~~hp~~~~~DiALLk 119 (246)
T 1qtf_A 48 TLATGVLIGKN-TIVTNYHVAREAAKN-----P--SNIIFTPAQNRDAEKNEFPTPYGKFEAEEIKESPYGQGLDLAIIK 119 (246)
T ss_dssp EEEEEEEEETT-EEEECHHHHGGGTTC-----G--GGEEEEETCCCCTTTTCCCCTTCCEEEEEEESCTTCTTSCCEEEE
T ss_pred ceEEEEEEECC-EEEECHHhCCCCCCC-----c--eEEEEecCccccccccccccCCceEEEEEEEeCCCCCCCCEEEEE
Confidence 46999999975 999999999754310 0 0233333210 0 0257788888888 89999999
Q ss_pred EecCC------CCccceeecCCCCCCCCCEEEEEecCCCCCCc-eeEEEEeeeccccccCCCceecceEEEeeccCCCCc
Q 019504 124 IEASE------DLLKPINVGQSSFLKVGQQCLAIGNPFGFDHT-LTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNS 196 (340)
Q Consensus 124 v~~~~------~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~~~-~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~S 196 (340)
++.+. ..++++.|+++..+..|+.++++|||.+...+ .....+... ..+++++.+++|+|
T Consensus 120 l~~~~~~~~~~~~v~~i~L~~~~~~~~g~~v~v~G~p~g~~~~~~~~~~~~~~-------------~~~~~~~~~~~GdS 186 (246)
T 1qtf_A 120 LKPNEKGESAGDLIQPANIPDHIDIAKGDKYSLLGYPYNYSAYSLYQSQIEMF-------------NDSQYFGYTEVGNS 186 (246)
T ss_dssp ECCCTTSCCHHHHSCCCCCCSSCCCCTTCEEEEEECCTTTSTTCCEEEEEEES-------------SSSBEESCCCGGGT
T ss_pred EeCCccccccccceeeeecCCccccCCCCEEEEEECCCCCCCceeEeeeeeec-------------CcEEEeCCCCCCCc
Confidence 98764 13678888766667899999999999876533 112111110 01345678899999
Q ss_pred cceeecCCCcEEEEEeeee
Q 019504 197 GGPLLDSKGNLIGINTAII 215 (340)
Q Consensus 197 GGPl~d~~G~VVGi~~~~~ 215 (340)
||||+|.+|+||||+++..
T Consensus 187 GGPlv~~~g~lvGI~s~g~ 205 (246)
T 1qtf_A 187 GSGIFNLKGELIGIHSGKG 205 (246)
T ss_dssp TCEEECTTCCEEEEEEEEE
T ss_pred hhheECCCCEEEEEEeccc
Confidence 9999999999999999865
No 29
>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}
Probab=99.76 E-value=3.8e-18 Score=144.26 Aligned_cols=152 Identities=22% Similarity=0.324 Sum_probs=112.6
Q ss_pred eEEEEEcC--CCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEEEEEEeC-CCCcEEEEEEecCCCCcc---
Q 019504 59 GSGVVWDG--KGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEGKLVGAD-RAKDLAVLKIEASEDLLK--- 132 (340)
Q Consensus 59 GsGfiI~~--~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a~v~~~d-~~~DlAlL~v~~~~~~~~--- 132 (340)
=+||++.+ ++|||||+||+.... .+.+ ..++++..| +..|+||||++.+....+
T Consensus 17 T~Gf~v~~~~~~~ilTa~Hc~~~g~-----------~v~~---------~~g~v~~~~~~~~D~Alikl~~~~~~~~~v~ 76 (186)
T 2pfe_A 17 SIGFSVRQGSQTGFATAGHCGSTGT-----------RVSS---------PSGTVAGSYFPGRDMGWVRITSADTVTPLVN 76 (186)
T ss_dssp ECCEEEEETTEEEEEECGGGCCTTC-----------EEBT---------TTEEEEEEECSBSCEEEEEECTTSEEEEEEE
T ss_pred EeeEEEEcCCeeEEEEChhhCCCCC-----------EEEE---------eeEEEEecCCCCCCEEEEEeCCCccccccee
Confidence 46999964 469999999998754 4432 346777887 889999999987532122
Q ss_pred -----ceeecCCCCCCCCCEEEEEecCCCCCCceeEEEEeeeccccccCCCceecceEEEeeccCCCCccceeecCCCcE
Q 019504 133 -----PINVGQSSFLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSKGNL 207 (340)
Q Consensus 133 -----~~~l~~~~~~~~G~~v~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d~~G~V 207 (340)
++.+..+..+++|+.|+.+|++.+ .+.|+|+.+++......+ .+.++++++....+|+|||||+. ++++
T Consensus 77 ~~~g~~~~i~~~~~~~vG~~vc~~G~~tG----~t~G~vs~~~~tv~~~~~-~~~~~~~~~~c~~~GDSGgpl~~-~~~~ 150 (186)
T 2pfe_A 77 RYNGGTVTVTGSQEAATGSSVCRSGATTG----WRCGTIQSKNQTVRYAEG-TVTGLTRTTACAEGGDSGGPWLT-GSQA 150 (186)
T ss_dssp CSSSCEEECCBCCCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEETTE-EEEEEEEESCCCCTTCTTCEEEE-TTEE
T ss_pred ccCCceEecCCCCCCCCCCeEEEEEeCCc----eEEEEEEEEeeeEEeCCc-eEeceEeccEEecCCCccCeEEE-CCEE
Confidence 234555667899999999999877 678999988876432222 24456788888889999999995 8899
Q ss_pred EEEEeeeeeCCCCcCceEEEEehHhHHHHH
Q 019504 208 IGINTAIITQTGTSAGVGFAIPSSTVLKIV 237 (340)
Q Consensus 208 VGi~~~~~~~~~~~~~~~~aip~~~i~~~l 237 (340)
+||+++....+. ..+.+|++|++.+++.+
T Consensus 151 vGi~s~g~~~c~-~~~~~~~~pi~~~l~~~ 179 (186)
T 2pfe_A 151 QGVTSGGTGDCR-SGGITFFQPINPLLSYF 179 (186)
T ss_dssp EEEEEEEEEETT-TEEEEEEEEHHHHHHHH
T ss_pred EEEEeecCCCCC-CCCcEEEEEHHHHHHHC
Confidence 999998764332 34689999998776653
No 30
>1mbm_A NSP4 proteinase, chymotrypsin-like serine protease; serine proteinase, chymotrypsin-like proteinase, collapsed O HOLE, transferase; 2.00A {Equine arteritis virus} SCOP: b.47.1.3
Probab=99.71 E-value=3.6e-17 Score=133.78 Aligned_cols=115 Identities=18% Similarity=0.241 Sum_probs=87.8
Q ss_pred cCCceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEEEEEEeCCCCcEEEEEE---ecCCCCc
Q 019504 55 PEGNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEGKLVGADRAKDLAVLKI---EASEDLL 131 (340)
Q Consensus 55 ~~~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v---~~~~~~~ 131 (340)
+.+.||||+|+.+|++||++||+.+.. ..+|++ +|. .++ +.+++..|+|++++ +.+ ...
T Consensus 13 ~~G~GsgF~i~~~g~vVTA~HVv~~~~-----------~~~V~~-~G~--~~~---Vgf~~~~DlA~l~v~~~~~~-g~~ 74 (198)
T 1mbm_A 13 SYGTGSVWTRNNEVVVLTASHVVGRAN-----------MATLKI-GDA--MLT---LTFKKNGDFAEAVTTQSELP-GNW 74 (198)
T ss_dssp SEEEEEEEEETTEEEEEEEHHHHCTTC-----------EEEEEE-TTE--EEE---EECEEETTEEEEEECTTTSC-SCC
T ss_pred cCCccceEEECCCeEEEEeeeEEccCc-----------eEEEEE-CCE--EEE---eecccCCcEEEEEeeccCCC-CCC
Confidence 446799999999999999999998765 677888 886 444 77889999999999 444 346
Q ss_pred cceeecCCCCCCCCCEEEEEecCCCCCCceeEEEEeeeccccccCCCceecceEEEeeccCCCCccceeecCCCcEEEEE
Q 019504 132 KPINVGQSSFLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSKGNLIGIN 211 (340)
Q Consensus 132 ~~~~l~~~~~~~~G~~v~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~ 211 (340)
++++|+. +++|+.-+. ...|.+..+.- . ..+++++ .||+||||++|.+ +||||+
T Consensus 75 P~l~las---p~vG~a~~~----------~~tG~~~~l~g----~-----~g~l~~t---~PGDSGsPVl~~~-~vIGV~ 128 (198)
T 1mbm_A 75 PQLHFAQ---PTTGPASWC----------TATGDEEGLLS----G-----EVCLAWT---TSGDSGSAVVQGD-AVVGVH 128 (198)
T ss_dssp CBCCBCC---CCSEEEEEE----------ETTEEEEEEEC----S-----SCEECCC---CGGGTTCEEEETT-EEEEEE
T ss_pred cccccCC---CcccceEEe----------eccccEEEEec----C-----CceeEcC---CCCCCCCccccCC-eEEEEE
Confidence 7888843 588883333 45566665541 1 1347777 7899999999988 999999
Q ss_pred ee
Q 019504 212 TA 213 (340)
Q Consensus 212 ~~ 213 (340)
++
T Consensus 129 T~ 130 (198)
T 1mbm_A 129 TG 130 (198)
T ss_dssp EE
T ss_pred ec
Confidence 98
No 31
>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A
Probab=99.70 E-value=5.5e-17 Score=136.99 Aligned_cols=152 Identities=22% Similarity=0.283 Sum_probs=102.0
Q ss_pred eE-EEEEcC--CCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecCCC---Ccc
Q 019504 59 GS-GVVWDG--KGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEGKLVGADRAKDLAVLKIEASED---LLK 132 (340)
Q Consensus 59 Gs-GfiI~~--~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~~---~~~ 132 (340)
+| ||+|.. ++|||||+||+.... .+.+ |. .. ....+..|+||||++.+.. .+.
T Consensus 14 ct~G~~v~~~~~~~vlTaaHc~~~~~-----------~~~~----G~---~~---~~~~~~~DiAlikl~~~~~~~~~v~ 72 (181)
T 2sga_A 14 CSLGFNVSVNGVAHALTAGHCTNISA-----------SWSI----GT---RT---GTSFPNNDYGIIRHSNPAAADGRVY 72 (181)
T ss_dssp EECCEEEEETTEEEEEECHHHHTTCS-----------EETT----EE---EE---EEECSBSCEEEEEESCGGGCCCEEE
T ss_pred EeccEEEEECCceEEEECcccCCCCC-----------ceee----cc---ee---CCcCCCCCEEEEEccCCCcccceEE
Confidence 55 999974 359999999997643 2211 11 11 1223667999999987421 122
Q ss_pred ce-----eecCCCCCCCCCEEEEEecCCCCCCceeEEEEeeeccccccCCCceecceEEEeeccCCCCccceeecCCCcE
Q 019504 133 PI-----NVGQSSFLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSKGNL 207 (340)
Q Consensus 133 ~~-----~l~~~~~~~~G~~v~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d~~G~V 207 (340)
++ .+.....+++|+.|+++|++.+ .+.|.++...+.........+.+.++++...++|+|||||++.+ ++
T Consensus 73 ~i~~~~~~~~~~~~~~~G~~v~~~G~~~~----~t~G~v~~~~~~v~~~~~~~~~~~i~~~~c~~~GDSGGPlv~~~-~~ 147 (181)
T 2sga_A 73 LYNGSYQDITTAGNAFVGQAVQRSGSTTG----LRSGSVTGLNATVNYGSSGIVYGMIQTNVCAQPGDSGGSLFAGS-TA 147 (181)
T ss_dssp CSSSCEEECCEECCCCTTCEEEEEETTTE----EEEEEEEEEEEEEECGGGCEEEEEEEESCCCCTTCTTCEEEETT-EE
T ss_pred ecCCcceeecccccCCCCCEEEEeecCCC----ccEEEEEEeEEEEECCCCCEEeeeEecccccCCCCCCCEEEECC-EE
Confidence 21 2222356789999999998755 46777877665432111111334577888888999999999865 99
Q ss_pred EEEEeeeeeCCCCcCceEEEEehHhHHHHH
Q 019504 208 IGINTAIITQTGTSAGVGFAIPSSTVLKIV 237 (340)
Q Consensus 208 VGi~~~~~~~~~~~~~~~~aip~~~i~~~l 237 (340)
+||+++....+. ....+++.|++.+++++
T Consensus 148 vGI~s~g~~~~~-~~~~~v~~~v~~~~~~l 176 (181)
T 2sga_A 148 LGLTSGGSGNCR-TGGTTFYQPVTEALSAY 176 (181)
T ss_dssp EEEEEEEEEETT-TEEEEEEEEHHHHHHHH
T ss_pred EEEEEeeCCCCc-CCCceEEEEHHHHHHhc
Confidence 999999765443 24689999999888776
No 32
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=99.65 E-value=1.8e-18 Score=138.84 Aligned_cols=104 Identities=27% Similarity=0.377 Sum_probs=88.8
Q ss_pred CceEEEEehHhHHHHHHHHHHcCceeeeeeeEEecc-----HHHHhhcCCC----CCcEEEeeCCCChhhhcCCCccccC
Q 019504 222 AGVGFAIPSSTVLKIVPQLIQYGKVVRAGLNVDIAP-----DLVASQLNVG----NGALVLQVPGNSLAAKAGILPTTRG 292 (340)
Q Consensus 222 ~~~~~aip~~~i~~~l~~l~~~~~~~~~~lg~~~~~-----~~~~~~~~~~----~g~~V~~v~~~spa~~~gl~~~~~~ 292 (340)
.+++||||++.+++++++|+++|++.++|||+.+.+ ..+++.++++ .|++|.+|.++|||+ +||
T Consensus 2 ~GigFAIP~~~~~~v~~~L~~~G~v~r~~LGv~~~~~~~~~~~~~~~lgl~~~~~~g~~V~~V~~~spA~-aGL------ 74 (134)
T 2l97_A 2 EGLGFAIPANDAINIIEQLEKNGKVTRPALGIQMVNLSNVSTSDIRRLNIPSNVTSGVIVRSVQSNMPAN-GHL------ 74 (134)
T ss_dssp CCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCEEEESSSSCHHHHHHHSSCSSSCSCEEEEECSTTSGGG-TTS------
T ss_pred CcEEEEeEHHHHHHHHHHHHHcCCEeeeEeeEEEEECCchhHHHHHHcCCCcCCCCCEEEEEECCCCchH-HCC------
Confidence 478999999999999999999999999999998753 2567788875 799999999999999 999
Q ss_pred CCCCCcCCcEEEEECCEEccCCCCCCCceeEEEee-CCCCceEEEEeCC
Q 019504 293 FAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICA-EPNQDHLTCLKSS 340 (340)
Q Consensus 293 ~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~-~~~~~~~~~~~~~ 340 (340)
++||+|++|||++|.+..| +..++... .....+++|+|++
T Consensus 75 -----~~GD~I~~inG~~v~~~~~---l~~~l~~~~~g~~v~l~v~R~g 115 (134)
T 2l97_A 75 -----EKYDVITKVDDKEIASSTD---LQSALYNHSIGDTIKITYYRNG 115 (134)
T ss_dssp -----CSSCEEEEETTEECCCHHH---HHHHHHHSSTTCEEEEEEEETT
T ss_pred -----CCCCEEEEECCEEcCCHHH---HHHHHHhCCCCCEEEEEEEECC
Confidence 9999999999999999987 56555554 3345688888864
No 33
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=99.56 E-value=3.5e-15 Score=124.15 Aligned_cols=120 Identities=22% Similarity=0.303 Sum_probs=78.2
Q ss_pred cCCceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecCCCCccce
Q 019504 55 PEGNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEGKLVGADRAKDLAVLKIEASEDLLKPI 134 (340)
Q Consensus 55 ~~~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~~~~~~~ 134 (340)
..+.|+||.|+.+++||||+|||.+.. . . ...++. .+ .+.+|+..|+|++++......+|.+
T Consensus 28 ~~GsGt~F~i~g~~~VvTA~HVVg~~~-----------~-v-Vt~~g~--r~---~~~f~~~~D~All~i~~~~g~~P~l 89 (213)
T 3fan_A 28 SMGSGGVFTIDGKIKCVTAAHVLTGNS-----------A-R-VSGVGF--NQ---MLDFDVKGDFAIADCPNWQGVAPKA 89 (213)
T ss_dssp SEEEEEEEEETTEEEEEEEGGGSBTTE-----------E-E-EEETTE--EE---EEECEEETTEEEEECTTCCSCCCBC
T ss_pred CCCceEEEEECCcEEEEEeccEeCCCC-----------E-E-EecCCc--EE---EEEecCCCcEEEEEccCcCCCCCcc
Confidence 345699999997789999999999874 3 3 345664 33 3477999999999996544457888
Q ss_pred eecCCCCCCCCCEEEEEecCCCCCCceeEEEEeeeccccccCCCceecceEEEeeccCCCCccceeecCCCcEEEEEeee
Q 019504 135 NVGQSSFLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSKGNLIGINTAI 214 (340)
Q Consensus 135 ~l~~~~~~~~G~~v~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~~~ 214 (340)
+|+... ..|...+..-+ ....|.+.. . ..+.++ ++|||||||+|.+|+||||++..
T Consensus 90 KlA~~~--~~G~a~~~~~~------gv~~G~i~~--------~-----~al~~T---~pGdSGsPVvn~dG~VIGVHt~s 145 (213)
T 3fan_A 90 QFCEDG--WTGRAYWLTSS------GVEPGVIGN--------G-----FAFCFT---ACGDSGSPVITEAGELVGVHTGS 145 (213)
T ss_dssp CBCCTT--CCEEEEEEETT------EEEEEEEET--------T-----EEEESS---CCCSTTCEEEETTSCEEEEEEC-
T ss_pred eeeeee--ccCceEEEEcc------Ccccccccc--------C-----CEEEec---CCCCCCCccCCCCCcEEEEEecc
Confidence 886322 22223232211 123333321 0 013222 58999999999999999999975
Q ss_pred ee
Q 019504 215 IT 216 (340)
Q Consensus 215 ~~ 216 (340)
-.
T Consensus 146 ~~ 147 (213)
T 3fan_A 146 NK 147 (213)
T ss_dssp --
T ss_pred CC
Confidence 43
No 34
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*
Probab=99.46 E-value=4.7e-12 Score=110.71 Aligned_cols=172 Identities=16% Similarity=0.172 Sum_probs=103.8
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC------CceeEEEEEEEEeCC-------CCcEEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD------GVQKNFEGKLVGADR-------AKDLAVLKI 124 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~------g~~~~~~a~v~~~d~-------~~DlAlL~v 124 (340)
..+|.+|+++ ||||+|||+.... .+.+-..+ ........+.+..++ ..|||||++
T Consensus 25 ~CgGtLI~~~-~VLTAAHC~~~~~-----------~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L 92 (234)
T 3s69_A 25 FCSGTLINEE-WVLTAAHCDNTNF-----------QMKLGVHSKKVLNEDEQTRNPKEKFICPNKKNDEVLDKDIMLIKL 92 (234)
T ss_dssp EEEEEEEETT-EEEECGGGCCSSC-----------EEEESCCCSSSCCTTCEEECEEEEEECTTCCTTCTTSSCCEEEEE
T ss_pred EEeEEEeeCC-EEEEchhhCCCCc-----------eEEecccccccccCCcceeeceEEEECCCccCCCCCcccEEEEee
Confidence 4899999987 9999999986432 23322111 111112223333232 359999999
Q ss_pred ecCC---CCccceeecCCCCCCCCCEEEEEecCCCC------CCceeEEEEeeeccc----cccCCCceecceEEE----
Q 019504 125 EASE---DLLKPINVGQSSFLKVGQQCLAIGNPFGF------DHTLTVGVISGLNRD----IFSQAGVTIGGGIQT---- 187 (340)
Q Consensus 125 ~~~~---~~~~~~~l~~~~~~~~G~~v~~iG~p~g~------~~~~~~G~vs~~~~~----~~~~~~~~~~~~i~~---- 187 (340)
+.+. ..+.|+.|... ....|+.+++.||.... ........+.-+... ....... ....+-.
T Consensus 93 ~~~v~~~~~v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~-~~~~~Ca~~~~ 170 (234)
T 3s69_A 93 DSRVSNSEHIVPLSLPSS-PPSVGSVCHIMGWGSITPIKVTYPDVPYCAYINLLDDAVCQAGYPELLT-EYRTLCAGILE 170 (234)
T ss_dssp SSCCCCBTTBCCCCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTTCCT-TSCEEEEECTT
T ss_pred CCcCCCCCcceeeecCCC-CCCCCCEEEEEECCCCCCCCcCcccccceeEEeecCHHHHhhhcccccC-CcceEeccCCC
Confidence 8763 34667888543 45679999999986421 122233333222211 0000000 0011221
Q ss_pred -eeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHcC
Q 019504 188 -DAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQYG 244 (340)
Q Consensus 188 -d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~~ 244 (340)
....|.|+|||||+. +++++||++++...++.....+....+...++|+++.++..
T Consensus 171 ~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~~ 227 (234)
T 3s69_A 171 GGKDTCGGDSGGPLIC-NGQFQGIVSFGAHPCGQGLKPGVYTKVFDYNHWIQSIIAGN 227 (234)
T ss_dssp CSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHTC
T ss_pred CCCccCCCCCccceEE-cCEEEEEEEEcccccCCCCCCcEEeeHHHHHHHHHHHhcCC
Confidence 345788999999995 78899999987654543344567788899999999888754
No 35
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}
Probab=99.44 E-value=3.5e-12 Score=111.83 Aligned_cols=173 Identities=15% Similarity=0.146 Sum_probs=104.4
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC------CceeEEEEEEEEeCC-------CCcEEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD------GVQKNFEGKLVGADR-------AKDLAVLKI 124 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~------g~~~~~~a~v~~~d~-------~~DlAlL~v 124 (340)
..+|.+|+++ ||||+|||+.... .+.+-..+ .....+..+.+..++ ..|||||++
T Consensus 27 ~CgGtLI~~~-~VLTAAHC~~~~~-----------~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L 94 (238)
T 4e7n_A 27 FCGGTLINQE-WVLTAAHCDRKNF-----------RIKLGMHSKKVPNEDEQTRVPKEKFFCLSSKNYTLWDKDIMLIRL 94 (238)
T ss_dssp EEEEEECSSS-EEEECGGGCCSSC-----------EEEESCSCSSSCCTTCEEECEEEEECSSTTCCCCSSSCCCEEEEE
T ss_pred EEEEEEecCC-EEEEhHHcCCCCC-----------eEEeceeeccccCCCceeEeeeeeEEcCCCCCCCCCCCcEEEEEe
Confidence 4899999987 9999999986432 33332211 111112222222232 459999999
Q ss_pred ecCC---CCccceeecCCCCCCCCCEEEEEecCCCC------CCceeEEEEeeeccccccCC-----CceecceEEE---
Q 019504 125 EASE---DLLKPINVGQSSFLKVGQQCLAIGNPFGF------DHTLTVGVISGLNRDIFSQA-----GVTIGGGIQT--- 187 (340)
Q Consensus 125 ~~~~---~~~~~~~l~~~~~~~~G~~v~~iG~p~g~------~~~~~~G~vs~~~~~~~~~~-----~~~~~~~i~~--- 187 (340)
+.+. ..+.|+.|... ....|+.+++.||.... ........+.-+....-... .......+-.
T Consensus 95 ~~~v~~~~~v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~Ca~~~ 173 (238)
T 4e7n_A 95 DSPVKNSKHIAPFSLPSS-PPSVGSVCRIMGWGRISPTEGTYPDVPHCVNINLLEYEMCRAPYPEFELPATSRTLCAGIL 173 (238)
T ss_dssp SSCCCCBTTBCCCCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECGGGGTTTCGGGCCCSCCSEEEEECT
T ss_pred CCCccCCCceeeeeCCCC-CCCCCCEEEEEECCCCCCCCCCCCccceEeeccccCHHHHhhhcccccCCCCCCeEEeCCC
Confidence 8763 34677888643 45679999999986421 12233333332221110000 0000112222
Q ss_pred --eeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHcC
Q 019504 188 --DAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQYG 244 (340)
Q Consensus 188 --d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~~ 244 (340)
....|.|+|||||+. +++++||+++....+......+....+...++|+++.++..
T Consensus 174 ~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~~ 231 (238)
T 4e7n_A 174 EGGKDTCKGDSGGPLIC-NGQFQGIASWGDDPCAQPHKPAAYTKVFDHLDWIENIIAGN 231 (238)
T ss_dssp TCSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEESGGGHHHHHHHHTTC
T ss_pred CCCCccCCCCCCcceEE-CCEEEEEEEEeCCCCCCCCCCeEEEEhHHHHHHHHHHHhcC
Confidence 245688999999995 78999999987654443344567788889999999887654
No 36
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*
Probab=99.44 E-value=5e-12 Score=110.55 Aligned_cols=174 Identities=14% Similarity=0.151 Sum_probs=104.7
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC------CceeEEEEEEEEeCC-------CCcEEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD------GVQKNFEGKLVGADR-------AKDLAVLKI 124 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~------g~~~~~~a~v~~~d~-------~~DlAlL~v 124 (340)
..+|.+|+++ ||||+|||+.... .+.+-..+ ..........+..++ ..|||||++
T Consensus 27 ~CgGtLI~~~-~VLTAAHC~~~~~-----------~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L 94 (234)
T 3s9c_A 27 HCAGALINRE-WVLTAAHCDRRNI-----------RIKLGMHSKNIRNEDEQIRVPRGKYFCLNTKFPNGLDKDIMLIRL 94 (234)
T ss_dssp EEEEEEEETT-EEEECGGGCCTTE-----------EEEESCSSSSSCCTTCEEECEEEEECCSSCSSTTCGGGCCEEEEE
T ss_pred EEeeEEeeCC-EEEEchhhcCCCc-----------eEEEeecccccccCCcceEEeeeEEEeCCCCCCCCCcCceEEEEE
Confidence 3899999987 9999999986421 33322111 111111222222233 249999999
Q ss_pred ecCC---CCccceeecCCCCCCCCCEEEEEecCCCC----CCceeEEEEeeeccccccC-CC-cee-cceEEE-----ee
Q 019504 125 EASE---DLLKPINVGQSSFLKVGQQCLAIGNPFGF----DHTLTVGVISGLNRDIFSQ-AG-VTI-GGGIQT-----DA 189 (340)
Q Consensus 125 ~~~~---~~~~~~~l~~~~~~~~G~~v~~iG~p~g~----~~~~~~G~vs~~~~~~~~~-~~-~~~-~~~i~~-----d~ 189 (340)
+.+. ..+.|+.|... ....|+.+++.||.... ........+.-+....-.. .. ... ...+-. ..
T Consensus 95 ~~~v~~~~~v~pi~L~~~-~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~ 173 (234)
T 3s9c_A 95 RRPVTYSTHIAPVSLPSR-SRGVGSRCRIMGWGKISTTTYPDVPHCTNIFIVKHKWCEPLYPWVPADSRTLCAGILKGGR 173 (234)
T ss_dssp SSCCCCBTTBCCCBCCSS-CCCTTCEEEEEESSCSBTTBCCSSCEEEEEEEECGGGTTTTCTTSCTTSSEEEEECTTSSC
T ss_pred CCccccCCcccccccCCC-CCCCCCeEEEEeeCCCCCCCCCccccccceEecCHHHhhhcccCCCCCcceEEeecCCCCC
Confidence 8763 35678888644 45679999999986421 1223333333222111000 00 000 112222 34
Q ss_pred ccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHcCc
Q 019504 190 AINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQYGK 245 (340)
Q Consensus 190 ~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~~~ 245 (340)
..|.|+|||||+. +++++||+++....++.....+....+...++|+++.++...
T Consensus 174 ~~C~GDSGgPl~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~~~~ 228 (234)
T 3s9c_A 174 DTCHGDSGGPLIC-NGEMHGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSIIAGNR 228 (234)
T ss_dssp BCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHTCS
T ss_pred ccCCCCCCCeEEE-eCCcEEEEEEeCCCCCCCCCCcEEEEhHHhHHHHHHHHcCCC
Confidence 5688999999995 788999999876545433445677888999999999887653
No 37
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=99.44 E-value=3.2e-12 Score=111.18 Aligned_cols=170 Identities=16% Similarity=0.141 Sum_probs=104.3
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC----CceeEEEEEEEEeCCC-----CcEEEEEEecCC
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD----GVQKNFEGKLVGADRA-----KDLAVLKIEASE 128 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~----g~~~~~~a~v~~~d~~-----~DlAlL~v~~~~ 128 (340)
..+|.+|+++ ||||+|||+..... ..+.|.+.. .....+..+-+..++. .|||||+++.+.
T Consensus 25 ~CgGtLI~~~-~VLTAAHC~~~~~~---------~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~DiALl~L~~~~ 94 (224)
T 1pq7_A 25 WCGGSLLNAN-TVLTAAHCVSGYAQ---------SGFQIRAGSLSRTSGGITSSLSSVRVHPSYSGNNNDLAILKLSTSI 94 (224)
T ss_dssp EEEEEEEETT-EEEECHHHHTTSCG---------GGEEEEESCSBSSSSSEEECEEEEEECTTCBTTBTCCEEEEESSCC
T ss_pred EEEEEEecCC-EEEEcHHccCCCCC---------CceEEEeCcceecCCCEEEEEEEEEECCCCCCCCCCEEEEEeCCCC
Confidence 4899999987 99999999976321 024444321 1112444555555654 599999998763
Q ss_pred ---CCccceeecC-CCCCCCCCEEEEEecCCCC------CCceeEEEEeeecc----ccccCCCceecceEEE-----ee
Q 019504 129 ---DLLKPINVGQ-SSFLKVGQQCLAIGNPFGF------DHTLTVGVISGLNR----DIFSQAGVTIGGGIQT-----DA 189 (340)
Q Consensus 129 ---~~~~~~~l~~-~~~~~~G~~v~~iG~p~g~------~~~~~~G~vs~~~~----~~~~~~~~~~~~~i~~-----d~ 189 (340)
..+.|+.|.. ...+..|+.+++.||.... ........+.-+.. ..... ......++-. ..
T Consensus 95 ~~~~~v~picL~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~-~~~~~~~~Ca~~~~~~~ 173 (224)
T 1pq7_A 95 PSGGNIGYARLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYGT-SAITNQMFCAGVSSGGK 173 (224)
T ss_dssp CCBTTBCCCCBCCTTCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHHHHHCT-TTSCTTEEEECCTTCCC
T ss_pred cCCCcccceecCCcccCCCCCCEEEEEecCCcCCCCCcccceeeEeEEEEEcHHHhhHhhcC-CCCCCCeEEeecCCCCC
Confidence 2467788863 2345789999999986432 11233333332221 11100 0001122322 24
Q ss_pred ccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHH
Q 019504 190 AINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQ 239 (340)
Q Consensus 190 ~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~ 239 (340)
..|.|+|||||+..+|.++||+++... ++.....+....+...++|+++
T Consensus 174 ~~C~GDSGgPL~~~~g~l~Gi~S~g~~-C~~~~~p~vyt~V~~~~~WI~~ 222 (224)
T 1pq7_A 174 DSCQGDSGGPIVDSSNTLIGAVSWGNG-CARPNYSGVYASVGALRSFIDT 222 (224)
T ss_dssp BCCTTCTTCEEECTTCCEEEEEEECSS-SSCTTCCEEEEETTTSHHHHHH
T ss_pred CCCcCCCCcceECcCCeEEEEEEeCCC-CCCCCCCeEEEEHHHHHHHHHh
Confidence 578999999999878999999998753 3322335667778888888775
No 38
>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*
Probab=99.43 E-value=9.1e-12 Score=109.26 Aligned_cols=172 Identities=17% Similarity=0.157 Sum_probs=103.9
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEec-----CCceeEEEEEEEEeCC-----------------
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILAS-----DGVQKNFEGKLVGADR----------------- 115 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~-----~g~~~~~~a~v~~~d~----------------- 115 (340)
..+|.+|+++ ||||+|||+.... .+.+-.. +.....+..+-+..++
T Consensus 25 ~CgGsLIs~~-~VLTAAHC~~~~~-----------~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~ 92 (237)
T 2zch_P 25 VCGGVLVHPQ-WVLTAAHCIRNKS-----------VILLGRHSLFHPEDTGQVFQVSHSFPHPLYDMSLLKNRFLRPGDD 92 (237)
T ss_dssp EEEEEEEETT-EEEECGGGCCSSC-----------EEEESCSBSSSCCTTCEEEEEEEEEECTTSCGGGGTSSSCCTTCB
T ss_pred EEEEEEecCC-EEEEcHHhcCCCc-----------eEEEecccccCCCCCcEEEEEEEEecCCCcchhhhcccccccCCC
Confidence 4899999987 9999999997532 2222111 0111233333333333
Q ss_pred -CCcEEEEEEecCC---CCccceeecCCCCCCCCCEEEEEecCCCC------CCceeEEEEeeecccc--ccCCCceecc
Q 019504 116 -AKDLAVLKIEASE---DLLKPINVGQSSFLKVGQQCLAIGNPFGF------DHTLTVGVISGLNRDI--FSQAGVTIGG 183 (340)
Q Consensus 116 -~~DlAlL~v~~~~---~~~~~~~l~~~~~~~~G~~v~~iG~p~g~------~~~~~~G~vs~~~~~~--~~~~~~~~~~ 183 (340)
..|||||+++.+. ..+.|+.|.. .....|+.+++.||.... ........+.-+.... ..........
T Consensus 93 ~~~DIALl~L~~~~~~~~~v~pi~Lp~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~ 171 (237)
T 2zch_P 93 SSHDLMLLRLSEPAELTDAVKVMDLPT-QEPALGTTCYASGWGSIEPEEFLTPKKLQCVDLHVISNDVCAQVHPQKVTKF 171 (237)
T ss_dssp CTTCCEEEEESSCCCCCSSCCCCCCCS-SCCCTTCEEEEEESCCSSSSSCCCCSBCEEEEEEEECHHHHHHHCSSBCCTT
T ss_pred CCcceEEEEeCCCCccCCcEeeeECCC-CCCCCCCEEEEEeCCccCCCCCcCCcccEEeEEEEeCHHHhcccccCCCCce
Confidence 5699999998763 3467888864 345789999999986432 1223333333222110 0000000012
Q ss_pred eEEE-----eeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHc
Q 019504 184 GIQT-----DAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQY 243 (340)
Q Consensus 184 ~i~~-----d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 243 (340)
++-. ....|.|+|||||+- ++.++||++++...++.....+....+...++|+++.++.
T Consensus 172 ~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~ 235 (237)
T 2zch_P 172 MLCAGRWTGGKSTCSGDSGGPLVC-NGVLQGITSWGSEPCALPERPSLYTKVVHYRKWIKDTIVA 235 (237)
T ss_dssp EEEEECTTCSCBCCTTCTTCEEES-SSSEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred EEeecCCCCCCcccCCCccCeEEE-CCEEEEEEEeCcCCCCCCCCCcEEEEHHHHHHHHHHHHhc
Confidence 2222 235789999999995 7899999998764444333456678888899999887653
No 39
>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Probab=99.43 E-value=5.9e-12 Score=109.86 Aligned_cols=172 Identities=19% Similarity=0.167 Sum_probs=103.3
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC-----CceeEEEEEEEEeCC-------CCcEEEEEEe
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD-----GVQKNFEGKLVGADR-------AKDLAVLKIE 125 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~-----g~~~~~~a~v~~~d~-------~~DlAlL~v~ 125 (340)
..+|.+|+++ ||||+|||+..... ..+.+-..+ +....+..+.+..++ ..|||||+++
T Consensus 26 ~CgGtLI~~~-~VLTAAHC~~~~~~---------~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 95 (228)
T 1fxy_A 26 FCGGTILSEF-YILTAAHCLYQAKR---------FKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLK 95 (228)
T ss_dssp EEEEEECSSS-EEEECGGGTTSCSS---------CEEEEECSCTTTCCCCEEEEEEEEEEECTTCBTTTTBTCCEEEEES
T ss_pred eEEEEEeeCC-EEEECHHHCCCCCc---------EEEEECccCccccCCCcEEEEEEEEEECCCCCCCCCcCcEEEEEEC
Confidence 4899999987 99999999964321 133332211 111233444444443 3599999998
Q ss_pred cCC---CCccceeecCCCCCCCCCEEEEEecCCCC------CCceeEEEEeeecccc--ccCCCceecceEEE-----ee
Q 019504 126 ASE---DLLKPINVGQSSFLKVGQQCLAIGNPFGF------DHTLTVGVISGLNRDI--FSQAGVTIGGGIQT-----DA 189 (340)
Q Consensus 126 ~~~---~~~~~~~l~~~~~~~~G~~v~~iG~p~g~------~~~~~~G~vs~~~~~~--~~~~~~~~~~~i~~-----d~ 189 (340)
.+. ..+.|+.|... ....|+.+++.||.... ........+.-+.... ..........++-. ..
T Consensus 96 ~~v~~~~~v~picLp~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~ 174 (228)
T 1fxy_A 96 TPITFRMNVAPASLPTA-PPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKITSNMFCVGFLEGGK 174 (228)
T ss_dssp SCCCCBTTBCCCCCCSS-CCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEEESCTTCSC
T ss_pred CcccCCCceeccCCCCC-CCCCCCEEEEEecCccCCCCCCCCccceEEEEEEeCHHHhHhhcCCCCCCCEEEeccCCCCC
Confidence 763 34678888643 45789999999986421 1223333333222110 00000001122222 23
Q ss_pred ccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 190 AINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 190 ~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
..|.|+|||||+- +++++||+++... +......+...-+...++|+++.++
T Consensus 175 ~~C~GDSGgPL~~-~~~l~Gi~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~~~ 225 (228)
T 1fxy_A 175 DSCQGDSGGPVVC-NGQLQGVVSWGDG-CAQKNKPGVYTKVYNYVKWIKNTIA 225 (228)
T ss_dssp BCCTTCTTCEEEE-TTEEEEEEEECSS-SSBTTBCEEEEEGGGGHHHHHHHHH
T ss_pred ccccCccccceEE-CCEEEEEEEECCC-CCCCCCCEEEEEhHHHHHHHHHHHh
Confidence 5789999999995 7899999998743 3322345667888888999887664
No 40
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Probab=99.42 E-value=1e-12 Score=113.64 Aligned_cols=167 Identities=16% Similarity=0.148 Sum_probs=98.1
Q ss_pred CceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCc----eeEEEEEEEEeC--------CCCcEEEEEE
Q 019504 57 GNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGV----QKNFEGKLVGAD--------RAKDLAVLKI 124 (340)
Q Consensus 57 ~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~----~~~~~a~v~~~d--------~~~DlAlL~v 124 (340)
...+|++|+++ +|||+|||+.+..... ....+.|.+.... ...+..+-+..+ ...|||||++
T Consensus 30 ~~CgGtLIs~~-~VLTAAHCv~~~~~~~-----~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DiAll~L 103 (215)
T 1p3c_A 30 SSCTGTLIAPN-KILTNGHCVYNTASRS-----YSAKGSVYPGMNDSTAVNGSANMTEFYVPSGYINTGASQYDFAVIKT 103 (215)
T ss_dssp CEEEEEEEETT-EEEECHHHHEETTTTE-----ECCCCEEEETCBTTBCTTCCEEEEEEECCHHHHHHCCGGGCCEEEEE
T ss_pred ceEEEEEEeCC-EEEECccEeccCCCCc-----cccceEEEEcccCCCCCCCeEEEEEEEeCCccccCCCcccCEEEEEE
Confidence 35999999977 9999999996532110 0001144432110 012333333333 3459999999
Q ss_pred ecCC-CCccceeecCCCCCCCCCEEEEEecCCCC----CCceeEEEEeeeccccccCCCceecceEEEeeccCCCCccce
Q 019504 125 EASE-DLLKPINVGQSSFLKVGQQCLAIGNPFGF----DHTLTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGP 199 (340)
Q Consensus 125 ~~~~-~~~~~~~l~~~~~~~~G~~v~~iG~p~g~----~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGP 199 (340)
+.+- ..+.|+.|... ....|+.++++||+... ........+..+.. ..+ .....+...|.|+||||
T Consensus 104 ~~~~~~~v~pi~l~~~-~~~~g~~~~~~Gwg~~~~~~~~~~l~~~~~~~~~~-----~~c---~~~~~~~~~C~GDSGgP 174 (215)
T 1p3c_A 104 DTNIGNTVGYRSIRQV-TNLTGTTIKISGYPGDKMRSTGKVSQWEMSGSVTR-----EDT---NLAYYTIDTFSGNSGSA 174 (215)
T ss_dssp SSCHHHHHCCCCBCCC-SCCTTCEEEEEECCHHHHHHHSSCCCEEEEEECCE-----ECS---SEEEECCCCCTTCTTCE
T ss_pred CCCCcccceeeecCCC-cccCCCeEEEecCCCCCcccccceechhccCccCc-----ccc---hheeeccccCCCCCCCe
Confidence 8751 23567777644 34789999999987321 11111111111110 000 11223567899999999
Q ss_pred eecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHH
Q 019504 200 LLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLI 241 (340)
Q Consensus 200 l~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~ 241 (340)
|+..+|.++||+++.... + ...+....+...+.|+++..
T Consensus 175 l~~~~g~lvGi~S~g~~c-~--~~p~v~t~v~~~~~WI~~~~ 213 (215)
T 1p3c_A 175 MLDQNQQIVGVHNAGYSN-G--TINGGPKATAAFVEFINYAK 213 (215)
T ss_dssp EECTTSCEEEECCEEEGG-G--TEEEEEBCCHHHHHHHHHHH
T ss_pred eEccCCeEEEEEecccCC-C--ccCceeEechHHHHHHHHHh
Confidence 998789999999987542 2 23344456677788887654
No 41
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*
Probab=99.42 E-value=6.1e-12 Score=109.99 Aligned_cols=173 Identities=14% Similarity=0.165 Sum_probs=104.5
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC------CceeEEEEEEEEeCC-------CCcEEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD------GVQKNFEGKLVGADR-------AKDLAVLKI 124 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~------g~~~~~~a~v~~~d~-------~~DlAlL~v 124 (340)
..+|.+|+++ ||||+|||+.... .+.+-..+ .....+..+-+..++ ..|||||++
T Consensus 24 ~CgGsLIs~~-~VLTAAHC~~~~~-----------~v~~G~~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L 91 (231)
T 2aiq_A 24 LCGGTLINQE-WVLTARHCDRGNM-----------RIYLGMHNLKVLNKDALRRFPKEKYFCLNTRNDTIWDKDIMLIRL 91 (231)
T ss_dssp EEEEEECSSS-EEEECGGGCCSSC-----------EEEESCSCTTSCCTTCEEECEEEEECCSSCCSSSTTTTCCEEEEE
T ss_pred eEEEEEEeCC-EEEEcHHcCCCCC-----------EEEEecccccccCCCceEEEEEEEEEECCCCCCCCCCCCEEEEEe
Confidence 4899999987 9999999987522 33332211 111223333333333 459999999
Q ss_pred ecCC---CCccceeecCCCCCCCCCEEEEEecCCCC------CCceeEEEEeeecccc-ccCCCceecceEEE-----ee
Q 019504 125 EASE---DLLKPINVGQSSFLKVGQQCLAIGNPFGF------DHTLTVGVISGLNRDI-FSQAGVTIGGGIQT-----DA 189 (340)
Q Consensus 125 ~~~~---~~~~~~~l~~~~~~~~G~~v~~iG~p~g~------~~~~~~G~vs~~~~~~-~~~~~~~~~~~i~~-----d~ 189 (340)
+.+. ..+.|+.|... ....|+.++++||.... ........+.-+.... ...........+-. ..
T Consensus 92 ~~~v~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~Ca~~~~~~~ 170 (231)
T 2aiq_A 92 NRPVRNSAHIAPLSLPSN-PPSVGSVCRIMGWGTITSPNATLPDVPHCANINILDYAVCQAAYKGLAATTLCAGILEGGK 170 (231)
T ss_dssp SSCCCCBTTBCCCCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTTCCSSEEEEECTTCSC
T ss_pred cCCCCCCCcEEeeECCCC-CCCCCCEEEEEeCCccCCCCCccCchhhhccceecchhhhhhhhcCCCcCcEEeccCCCCC
Confidence 8763 34678888644 34679999999986422 1223333333222110 00000000112222 24
Q ss_pred ccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHcC
Q 019504 190 AINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQYG 244 (340)
Q Consensus 190 ~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~~ 244 (340)
..+.|+|||||+- +|+++||+++....++.....+....+...++|+++.++..
T Consensus 171 ~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~~ 224 (231)
T 2aiq_A 171 DTCKGDSGGPLIC-NGQFQGILSVGGNPCAQPRKPGIYTKVFDYTDWIQSIISGN 224 (231)
T ss_dssp BCCTTCTTCEEEE-TTEEEEEEEEECSSTTCTTCCEEEEEGGGGHHHHHHHHHTC
T ss_pred cccCCcCCCcEEE-CCEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHcCC
Confidence 5789999999996 68999999987444443334567788889999999887654
No 42
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2
Probab=99.42 E-value=1.2e-11 Score=107.79 Aligned_cols=170 Identities=20% Similarity=0.267 Sum_probs=101.8
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEec-----CCceeEEEEEEEEeCC----------CCcEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILAS-----DGVQKNFEGKLVGADR----------AKDLAVL 122 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~-----~g~~~~~~a~v~~~d~----------~~DlAlL 122 (340)
..+|.+|+++ ||||+|||+.... .+.+-.. +.....+..+-+..++ ..|||||
T Consensus 25 ~CgGsLI~~~-~VLTAAHC~~~~~-----------~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl 92 (225)
T 1npm_A 25 ICGGVLVGDR-WVLTAAHCKKQKY-----------SVRLGDHSLQSRDQPEQEIQVAQSIQHPCYNNSNPEDHSHDIMLI 92 (225)
T ss_dssp EEEEEEEETT-EEEECGGGCCSSC-----------EEEESCSBTTC--CCCEEECEEEEEECTTCCSSCTTCCTTCCEEE
T ss_pred EEEEEEECCC-EEEEhHHcCCCCc-----------eEEEeeeEcCCCCCCcEEEEEEEEEECCCCCCCCccCccccEEEE
Confidence 4899999987 9999999986211 2322111 0111233333333333 2499999
Q ss_pred EEecCC---CCccceeecCCCCCCCCCEEEEEecCCCC------CCceeEEEEeeecccc--ccCCCceecceEEE----
Q 019504 123 KIEASE---DLLKPINVGQSSFLKVGQQCLAIGNPFGF------DHTLTVGVISGLNRDI--FSQAGVTIGGGIQT---- 187 (340)
Q Consensus 123 ~v~~~~---~~~~~~~l~~~~~~~~G~~v~~iG~p~g~------~~~~~~G~vs~~~~~~--~~~~~~~~~~~i~~---- 187 (340)
+++.+. ..+.|+.|... ....|+.+++.||.... ........+.-+.... ..........++-.
T Consensus 93 ~L~~~~~~~~~v~pi~L~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~ 171 (225)
T 1npm_A 93 RLQNSANLGDKVKPVQLANL-CPKVGQKCIISGWGTVTSPQENFPNTLNCAEVKIYSQNKCERAYPGKITEGMVCAGSSN 171 (225)
T ss_dssp EESSCCCCSSSSCCCEECSS-CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEECCHHHHHHHSTTTCCTTEEEEECTT
T ss_pred eeCCcccCCCceeceECCCC-CCCCCCEEEEEeCCcccCCCCCCCccceEeEEeeecHHHhhHHhCCCCCCCEEeecCCC
Confidence 998763 34778888654 45789999999986431 1223333333222110 00000000122222
Q ss_pred eeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHH
Q 019504 188 DAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLI 241 (340)
Q Consensus 188 d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~ 241 (340)
....|.|+|||||+. +|+++||+++....++.....+....+...++|+++.+
T Consensus 172 ~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~ 224 (225)
T 1npm_A 172 GADTCQGDSGGPLVC-DGMLQGITSWGSDPCGKPEKPGVYTKICRYTTWIKKTM 224 (225)
T ss_dssp CCBCCTTCTTCEEEE-TTEEEEEEEECCSSSCBTTBCEEEEEHHHHHHHHHHHH
T ss_pred CCeecCCCCCchheE-CCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 346789999999995 78999999987444443334566788888888888754
No 43
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2
Probab=99.42 E-value=1.8e-11 Score=106.07 Aligned_cols=166 Identities=20% Similarity=0.240 Sum_probs=100.3
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC-------ceeEEEEEEEEeC------CCCcEEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG-------VQKNFEGKLVGAD------RAKDLAVLKI 124 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g-------~~~~~~a~v~~~d------~~~DlAlL~v 124 (340)
..+|.+|+++ ||||+|||+..... ..+.|.+... ....+...-+..+ ...|||||++
T Consensus 28 ~CgGtLIs~~-~VLTAAHC~~~~~~---------~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DiALl~L 97 (221)
T 1fuj_A 28 FCGGTLIHPS-FVLTAAHCLRDIPQ---------RLVNVVLGAHNVRTQEPTQQHFSVAQVFLNNYDAENKLNDILLIQL 97 (221)
T ss_dssp CEEEEEEETT-EEEECGGGGSSSCG---------GGEEEEESCSBTTSCCTTCEEEEEEEEEECCCBTTTTBCCCEEEEE
T ss_pred EEEEEEecCC-EEEEchHhcCcCCC---------CceEEEEeeeeccCCCCceEEEEEEEEEeCCCCCCCCcccEEEEEe
Confidence 4899999987 99999999976431 0233443211 1122332222222 3469999999
Q ss_pred ecCC---CCccceeecCCC-CCCCCCEEEEEecCCCCC-----CceeEEEEeeeccccccCCCceecceEEE-----eec
Q 019504 125 EASE---DLLKPINVGQSS-FLKVGQQCLAIGNPFGFD-----HTLTVGVISGLNRDIFSQAGVTIGGGIQT-----DAA 190 (340)
Q Consensus 125 ~~~~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~~-----~~~~~G~vs~~~~~~~~~~~~~~~~~i~~-----d~~ 190 (340)
+.+. ..+.|+.|.... .+..|+.+++.||..... .......+.-+ ...-.. ..+-. ...
T Consensus 98 ~~~~~~~~~v~picL~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~-~~~C~~------~~~Ca~~~~~~~~ 170 (221)
T 1fuj_A 98 SSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTVV-TFFCRP------HNICTFVPRRKAG 170 (221)
T ss_dssp SSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSCSSSCBCSBCEEEEEEEE-CTTCCT------TEEEEECSSSSCB
T ss_pred CCccccCCcceeeECCCCcCCCCCCCEEEEEEeCCCCCCCCHHHHhhcccceEE-eeecCC------ceeeeccCCCCCC
Confidence 8763 346777786443 346799999999864321 12222222222 110000 11211 345
Q ss_pred cCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHH
Q 019504 191 INPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLI 241 (340)
Q Consensus 191 i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~ 241 (340)
.|.|+|||||+. +|.++||.++....++.....+....+...++|+++.+
T Consensus 171 ~C~GDSGgPL~~-~~~l~Gi~s~~~~gC~~~~~p~vyt~v~~~~~WI~~~i 220 (221)
T 1fuj_A 171 ICFGDSGGPLIC-DGIIQGIDSFVIWGCATRLFPDFFTRVALYVDWIRSTL 220 (221)
T ss_dssp CCTTCTTCEEEE-TTEEEEEEEECSSSTTCSSSCEEEEEGGGGHHHHHHHH
T ss_pred CCCCCCCCeeEE-CCEEeEEEEEeccCCCCCCCCcEEEeHHHHHHHHHHHh
Confidence 789999999996 78999999984322332233566788888888888754
No 44
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A
Probab=99.41 E-value=6.4e-12 Score=109.21 Aligned_cols=170 Identities=16% Similarity=0.207 Sum_probs=102.8
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEec-----CCceeEEEEEEEEeCC-------CCcEEEEEEe
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILAS-----DGVQKNFEGKLVGADR-------AKDLAVLKIE 125 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~-----~g~~~~~~a~v~~~d~-------~~DlAlL~v~ 125 (340)
..+|.+|+++ ||||+|||+.... .+.+-.. ++....+..+-+..++ ..|||||+++
T Consensus 24 ~CgGsLIs~~-~VLTAAHC~~~~~-----------~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 91 (222)
T 1hj8_A 24 FCGGSLVNEN-WVVSAAHCYKSRV-----------EVRLGEHNIKVTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLS 91 (222)
T ss_dssp EEEEEEEETT-EEEECGGGCCSSC-----------EEEESCSBTTSCCSCCEEEEEEEEEECTTCBTTTTBSCCEEEEES
T ss_pred EEEeEEecCC-EEEECHHhcCCCe-----------EEEEcccccccCCCCcEEEEEEEEEECCCCCCCCCCCcEEEEEEC
Confidence 4899999987 9999999996321 2222111 1111233444444443 4699999998
Q ss_pred cCC---CCccceeecCCCCCCCCCEEEEEecCCCC-----CCceeEEEEeeecccc--ccCCCceecceEEE-----eec
Q 019504 126 ASE---DLLKPINVGQSSFLKVGQQCLAIGNPFGF-----DHTLTVGVISGLNRDI--FSQAGVTIGGGIQT-----DAA 190 (340)
Q Consensus 126 ~~~---~~~~~~~l~~~~~~~~G~~v~~iG~p~g~-----~~~~~~G~vs~~~~~~--~~~~~~~~~~~i~~-----d~~ 190 (340)
.+. ..+.|+.|... .+..|+.+++.||.... ........+.-+.... ..........++-. ...
T Consensus 92 ~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~ 170 (222)
T 1hj8_A 92 KPATLNTYVQPVALPTS-CAPAGTMCTVSGWGNTMSSTADSNKLQCLNIPILSYSDCNNSYPGMITNAMFCAGYLEGGKD 170 (222)
T ss_dssp SCCCCSSSCCCCBCCSS-CCCTTCEEEEEESSCCCCSSCCTTBCEEEEEEBCCHHHHHHHSTTCCCTTEEEESCTTSSCB
T ss_pred CcccCCCceeccCCCCC-CCCCCCEEEEEECCCCCCCCCCCceeEEEEEEEcCHHHhhhhccCCCCCCeEEeccCCCCCc
Confidence 763 34678888643 46789999999986432 1223333333222100 00000001122322 235
Q ss_pred cCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 191 INPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 191 i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
.|.|+|||||+. +|+++||+++... ++.....+....+...++|+++.++
T Consensus 171 ~C~GDSGgPL~~-~~~l~Gi~S~g~~-C~~~~~p~vyt~v~~~~~WI~~~~~ 220 (222)
T 1hj8_A 171 SCQGDSGGPVVC-NGELQGVVSWGYG-CAEPGNPGVYAKVCIFNDWLTSTMA 220 (222)
T ss_dssp CCTTCTTCEEEE-TTEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred cCCCCcccceEE-CCEEEEEEeecCC-CCCCCcCcEEEEhHHhHHHHHHHhh
Confidence 789999999995 7899999998753 3322345667888888999887664
No 45
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Probab=99.41 E-value=2.2e-11 Score=105.97 Aligned_cols=168 Identities=13% Similarity=0.170 Sum_probs=101.6
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCc----e----eEEEEEEEEeC------CCCcEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGV----Q----KNFEGKLVGAD------RAKDLAVLK 123 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~----~----~~~~a~v~~~d------~~~DlAlL~ 123 (340)
..+|.+|+++ ||||+|||+..... ..+.|.+.... . ..+..+-+..+ ...|||||+
T Consensus 25 ~CgGtLI~~~-~VLTAAHC~~~~~~---------~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~ 94 (225)
T 1a7s_A 25 FCGGALIHAR-FVMTAASCFQSQNP---------GVSTVVLGAYDLRRRERQSRQTFSISSMSENGYDPQQNLNDLMLLQ 94 (225)
T ss_dssp EEEEEEEETT-EEEECGGGC----C---------CSEEEEESCSSTTSCCTTTCEEEEEEEEECSSCBTTTTBSCCEEEE
T ss_pred EEEEEEeeCC-EEEEchhccCCCCC---------CceEEEEeeeECCCCCCcceeEEeEEEEecccccCCCCcCCEEEEE
Confidence 4899999987 99999999976321 02344442210 0 22333323222 346999999
Q ss_pred EecCC---CCccceeecCCC-CCCCCCEEEEEecCCCCC-----CceeEEEEeeeccccccCCCceecceEEE-----ee
Q 019504 124 IEASE---DLLKPINVGQSS-FLKVGQQCLAIGNPFGFD-----HTLTVGVISGLNRDIFSQAGVTIGGGIQT-----DA 189 (340)
Q Consensus 124 v~~~~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~~-----~~~~~G~vs~~~~~~~~~~~~~~~~~i~~-----d~ 189 (340)
++.+. ..+.|+.|.... .+..|+.+++.||..... .......+.-+....-.. ..+-. ..
T Consensus 95 L~~~~~~~~~v~pi~L~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~------~~~Ca~~~~~~~ 168 (225)
T 1a7s_A 95 LDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQCRP------NNVCTGVLTRRG 168 (225)
T ss_dssp ESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESCCSSTTCCCCSSCEEEEEEECCGGGSCT------TEEEEECSSSSC
T ss_pred cCCcccCCCceeEEEcCCCcCCCCCCCEEEEEeCCcCCCCCCcccccceeeeEECCHHHhcc------CceEEeccCCCC
Confidence 98763 246677775433 346899999999864321 222333332222111100 11211 33
Q ss_pred ccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHcC
Q 019504 190 AINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQYG 244 (340)
Q Consensus 190 ~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~~ 244 (340)
..|.|+|||||+. +|.++||+++....++.. .+....+...++|+++.++..
T Consensus 169 ~~C~GDSGgPl~~-~g~l~Gi~S~g~~~C~~~--p~vyt~V~~~~~WI~~~~~~~ 220 (225)
T 1a7s_A 169 GICNGDGGTPLVC-EGLAHGVASFSLGPCGRG--PDFFTRVALFRDWIDGVLNNP 220 (225)
T ss_dssp BCCTTCTTCEEEE-TTEEEEEEEEECSSTTSS--CEEEEEGGGGHHHHHHHHHSC
T ss_pred CcccCCCcchhee-CCEEEEEEEEccCCcCCC--CcEEEEhHHhHHHHHHHhcCC
Confidence 5789999999996 489999999874444322 567788899999999887654
No 46
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A
Probab=99.41 E-value=3.9e-11 Score=104.34 Aligned_cols=167 Identities=17% Similarity=0.154 Sum_probs=100.7
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC-------CceeEEEEEEEEeCCC-------CcEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD-------GVQKNFEGKLVGADRA-------KDLAVLK 123 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~-------g~~~~~~a~v~~~d~~-------~DlAlL~ 123 (340)
..+|.+|+++ ||||+|||+.. .+.|.+.. .....+...-+..++. .|||||+
T Consensus 29 ~CgGtLI~~~-~VLTAAhC~~~-------------~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~ 94 (226)
T 4ag1_A 29 FCGGFLIRRN-FVLTAAHCAGR-------------SITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLK 94 (226)
T ss_dssp EEEEEEEETT-EEEECGGGCCS-------------EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEE
T ss_pred EEEEEEEeCC-EEEECcccCCC-------------CeEEEeCCcccCCCCCcceEEEEEEEEeCCCCCCCCCcCcEEEEE
Confidence 4899999987 99999999853 34444432 1112344444444544 5999999
Q ss_pred EecCC---CCccceeecCCC-CCCCCCEEEEEecCCCC-----CCceeEEEEeeeccccccC-CCceecceEEE-----e
Q 019504 124 IEASE---DLLKPINVGQSS-FLKVGQQCLAIGNPFGF-----DHTLTVGVISGLNRDIFSQ-AGVTIGGGIQT-----D 188 (340)
Q Consensus 124 v~~~~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~-----~~~~~~G~vs~~~~~~~~~-~~~~~~~~i~~-----d 188 (340)
++.+. ..+.++.|.... .+..|+.+++.||.... ........+.-+....-.. ........+-. .
T Consensus 95 L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~Ca~~~~~~ 174 (226)
T 4ag1_A 95 LKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRDFDHNLQLCVGNPRKT 174 (226)
T ss_dssp ESSCCCCCSSSCCCCCC-----CCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECGGGGTTSTTCCTTTEEEESCTTSC
T ss_pred ECCCCccCCceeccccCCcccCCCCCCEEEEEECCCCCCCCCCCCEeEEEEEEEcChHHcccccCcCccceEeeccCCCC
Confidence 98763 245566665332 34679999999986421 1223333333222111110 00001112222 2
Q ss_pred eccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 189 AAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 189 ~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
...|.|+|||||+- ++.++||+++..... ...+....+...++|+++.++
T Consensus 175 ~~~C~GDsGgPl~~-~~~l~Gi~S~g~~c~---~~p~vyt~v~~~~~WI~~~i~ 224 (226)
T 4ag1_A 175 KSAFKGDSGGPLLC-AGVAQGIVSYGRSDA---KPPAVFTRISHYRPWINQILQ 224 (226)
T ss_dssp CBCCTTCTTCEEEE-TTEEEEEEEECBTTC---CSCEEEEEHHHHHHHHHHHHH
T ss_pred CcCccCCCCCceEE-cCEEEEEEEECCCCC---CCCCEEEEhHHHHHHHHHHHh
Confidence 45688999999995 789999999876432 125677888889999988765
No 47
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Probab=99.41 E-value=1.2e-11 Score=107.53 Aligned_cols=169 Identities=18% Similarity=0.259 Sum_probs=103.4
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC------CceeEEEEEEEEeCC-------CCcEEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD------GVQKNFEGKLVGADR-------AKDLAVLKI 124 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~------g~~~~~~a~v~~~d~-------~~DlAlL~v 124 (340)
..+|.+|+++ ||||+|||+.... .+.+-..+ .....+...-+..++ ..|||||++
T Consensus 25 ~CgGsLIs~~-~VLTAAHC~~~~~-----------~v~~g~~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L 92 (223)
T 2bdg_A 25 FCSGVLVHPQ-WVLSAAHCFQNSY-----------TIGLGLHSLEADQEPGSQMVEASLSVRHPEYNRPLLANDLMLIKL 92 (223)
T ss_dssp EEEEEEEETT-EEEECGGGCCSSE-----------EEEESCSBSCGGGCTTCEEEEEEEEEECTTTTSSTTCSCCEEEEE
T ss_pred EEEEEEecCC-EEEEhHHhCCCCe-----------EEEEeeeecCCCCCCCcEEEEEEEEEeCCCCCCCCCcCcEEEEEE
Confidence 4899999987 9999999996421 33322111 111234444444443 359999999
Q ss_pred ecCC---CCccceeecCCCCCCCCCEEEEEecCCCCC----CceeEEEEeeeccc----cccCCCceecceEEE-----e
Q 019504 125 EASE---DLLKPINVGQSSFLKVGQQCLAIGNPFGFD----HTLTVGVISGLNRD----IFSQAGVTIGGGIQT-----D 188 (340)
Q Consensus 125 ~~~~---~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~----~~~~~G~vs~~~~~----~~~~~~~~~~~~i~~-----d 188 (340)
+.+- ..+.|+.|.. ..+..|+.+++.||..... .......+.-+... .... .....++-. .
T Consensus 93 ~~~v~~~~~v~pi~l~~-~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~--~~~~~~~Ca~~~~~~ 169 (223)
T 2bdg_A 93 DESVSESDTIRSISIAS-QCPTAGNSCLVSGWGLLANGRMPTVLQCVNVSVVSEEVCSKLYDP--LYHPSMFCAGGGQDQ 169 (223)
T ss_dssp SSCCCCCSSCCCCCBCS-SCCCTTCEEEEEESCCCTTSCCCSBCEEEEEEBCCHHHHHHHSTT--TCCTTEEEECCSTTC
T ss_pred CCcccCCCceecccCCC-CCCCCCCEEEEEeCcccCCCCCCCcceEEEEEEeCHHHhhhhhCC--CCCCCeEeccCCCCC
Confidence 8763 3467788864 3457899999999864321 22333333322210 0100 001122322 2
Q ss_pred eccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 189 AAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 189 ~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
...|.|+|||||+. ++.++||++++...++.....+....+...++|+++.++
T Consensus 170 ~~~C~GDsGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 222 (223)
T 2bdg_A 170 KDSCNGDSGGPLIC-NGYLQGLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKTVQ 222 (223)
T ss_dssp CBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEECGGGTHHHHHHHHH
T ss_pred CCcCCCCCCchheE-ccEEEEEEEecCCCCCCCCCCcEEEEHHHhHHHHHHHhc
Confidence 35789999999995 689999999875444433345667888888999887653
No 48
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Probab=99.40 E-value=1.2e-11 Score=107.63 Aligned_cols=168 Identities=14% Similarity=0.207 Sum_probs=102.7
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC-----CceeEEEEEEEEeCC-------CCcEEEEEEe
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD-----GVQKNFEGKLVGADR-------AKDLAVLKIE 125 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~-----g~~~~~~a~v~~~d~-------~~DlAlL~v~ 125 (340)
..+|.+|+++ ||||+|||+.. .+.|++.. .....+..+-+..++ ..|||||+++
T Consensus 25 ~CgGtLI~~~-~VLTAAHC~~~-------------~~~v~~G~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~ 90 (224)
T 2qxi_A 25 HCGGVLVNER-WVLTAAHCKMN-------------EYTVHLGSDTLGDRRAQRIKASKSFRHPGYSTQTHVNDLMLVKLN 90 (224)
T ss_dssp EEEEEEEETT-EEEECGGGCCS-------------CEEEEESCSBTTCTTSEEEEECEEEECTTCCTTTCTTCCEEEECS
T ss_pred EEEEEEecCC-EEEEhHHcCCC-------------CcEEEEeeeecCCCccEEEEEEEEEECCCCCCCCCcCcEEEEEeC
Confidence 4899999987 99999999842 23344322 111233333334443 3699999998
Q ss_pred cCC---CCccceeecCCCCCCCCCEEEEEecCCCC------CCceeEEEEeeeccc----cccCCCceecceEEE-----
Q 019504 126 ASE---DLLKPINVGQSSFLKVGQQCLAIGNPFGF------DHTLTVGVISGLNRD----IFSQAGVTIGGGIQT----- 187 (340)
Q Consensus 126 ~~~---~~~~~~~l~~~~~~~~G~~v~~iG~p~g~------~~~~~~G~vs~~~~~----~~~~~~~~~~~~i~~----- 187 (340)
.+. ..+.|+.|... ....|+.+++.||.... ........+.-+... .... .....++-.
T Consensus 91 ~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~--~~~~~~~Ca~~~~~ 167 (224)
T 2qxi_A 91 SQARLSSMVKKVRLPSR-CEPPGTTCTVSGWGTTTSPDVTFPSDLMCVDVKLISPQDCTKVYKD--LLENSMLCAGIPDS 167 (224)
T ss_dssp SCCCCBTTBCCCCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHHHGG--GCCTTEEEEECTTC
T ss_pred CCCcCCCceeeEECCCC-CCCCCCEEEEEeCCccCCCCCCCChhheEEEeeecCHHHhhHHhcC--cCCCCeEEecCCCC
Confidence 763 34678888644 34789999999986432 122222323222110 0000 000112222
Q ss_pred eeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHc
Q 019504 188 DAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQY 243 (340)
Q Consensus 188 d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 243 (340)
....|.|+|||||+- +|+++||+++....++.....+....+...++|+++.++.
T Consensus 168 ~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~ 222 (224)
T 2qxi_A 168 KKNACNGDSGGPLVC-RGTLQGLVSWGTFPCGQPNDPGVYTQVCKFTKWINDTMKK 222 (224)
T ss_dssp CCBCCTTCTTCEEEE-TTEEEEEEEECCSSSCCTTCCEEEEEGGGSHHHHHHHHHH
T ss_pred CCccCCCCccccEEE-CCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHHhc
Confidence 235789999999995 7899999998743443333456678888889998887653
No 49
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Probab=99.40 E-value=1.3e-11 Score=107.26 Aligned_cols=171 Identities=17% Similarity=0.198 Sum_probs=102.7
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC-----CceeEEEEEEEEeCC-------CCcEEEEEEe
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD-----GVQKNFEGKLVGADR-------AKDLAVLKIE 125 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~-----g~~~~~~a~v~~~d~-------~~DlAlL~v~ 125 (340)
..+|.+|+++ ||||+|||+.... .+.+-..+ .....+...-+..++ ..|||||+++
T Consensus 25 ~CgGtLIs~~-~VLTAAHC~~~~~-----------~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIAll~L~ 92 (223)
T 1lo6_A 25 LCGGVLIHPL-WVLTAAHCKKPNL-----------QVFLGKHNLRQRESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLA 92 (223)
T ss_dssp EEEEEEEETT-EEEECGGGCCTTC-----------EEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred EEEeEEecCC-EEEECccCCCCCe-----------EEEEcceecCCCCCCcEEEEEEEEEECCCCCCCCCcCeEEEEEEC
Confidence 4899999987 9999999986321 23221111 111233333333343 4699999998
Q ss_pred cCC---CCccceeecCCCCCCCCCEEEEEecCCCC----CCceeEEEEeeecccc--ccCCCceecceEEE-----eecc
Q 019504 126 ASE---DLLKPINVGQSSFLKVGQQCLAIGNPFGF----DHTLTVGVISGLNRDI--FSQAGVTIGGGIQT-----DAAI 191 (340)
Q Consensus 126 ~~~---~~~~~~~l~~~~~~~~G~~v~~iG~p~g~----~~~~~~G~vs~~~~~~--~~~~~~~~~~~i~~-----d~~i 191 (340)
.+. ..+.|+.|... ....|+.+++.||.... ........+.-+.... ..........++-. ....
T Consensus 93 ~~~~~~~~v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~ 171 (223)
T 1lo6_A 93 RPAKLSELIQPLPLERD-CSANTTSCHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYPGQITQNMLCAGDEKYGKDS 171 (223)
T ss_dssp SCCCCBTTBCCCCBCCC-TTCCCCEEEEEESSCCTTSSCCSBCEEEEEEEECHHHHHHHSTTTCCTTEEEEECTTTCCBC
T ss_pred CcccCCCceeecccCCC-CCCCCCEEEEEEECCCCCCCcCceeeEEEEEEeCHHHhhhhhCCCCCCCeEEeecCCCCCee
Confidence 763 34677888644 34789999999986432 1223333333222110 00000001122322 2357
Q ss_pred CCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 192 NPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 192 ~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
|.|+|||||+. +|+++||+++....++.....+...-+...++|+++.++
T Consensus 172 C~GDsGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 221 (223)
T 1lo6_A 172 CQGDSGGPLVC-GDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTIQ 221 (223)
T ss_dssp CTTTTTCEEEE-TTEEEEEEEECCSSCCCSSSCEEEEEGGGGHHHHHHHHC
T ss_pred ccccCCCcEEe-CCEEEEEEeeCCCCCCCCCCCcEEEEHHHHHHHHHHHhc
Confidence 89999999996 689999999874344333345667888889999988764
No 50
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*
Probab=99.40 E-value=1.1e-11 Score=107.26 Aligned_cols=166 Identities=16% Similarity=0.218 Sum_probs=100.2
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC-------ceeEEEEEEEEeC------CCCcEEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG-------VQKNFEGKLVGAD------RAKDLAVLKI 124 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g-------~~~~~~a~v~~~d------~~~DlAlL~v 124 (340)
..+|.+|+++ ||||+|||+..... ..+.|.+... ....+..+-+..+ ...|||||++
T Consensus 25 ~CgGtLI~~~-~VLTAAHC~~~~~~---------~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L 94 (218)
T 2z7f_E 25 FCGATLIAPN-FVMSAAHCVANVNV---------RAVRVVLGAHNLSRREPTRQVFAVQRIFENGYDPVNLLNDIVILQL 94 (218)
T ss_dssp EEEEEEEETT-EEEECHHHHTTSCG---------GGCEEEESCSBTTSCCTTCEEEEEEEEEESCCBTTTTBSCCEEEEE
T ss_pred EEEEEEccCC-EEEEcHHhcCCCCc---------CcEEEEEeceecCCCCCceEEEEEEEEEccCCCCCCCCCCEEEEEE
Confidence 4899999987 99999999976421 0233333221 0122333323322 3469999999
Q ss_pred ecCC---CCccceeecCCC-CCCCCCEEEEEecCCCCC-----CceeEEEEeeeccccccCCCceecceEEE-----eec
Q 019504 125 EASE---DLLKPINVGQSS-FLKVGQQCLAIGNPFGFD-----HTLTVGVISGLNRDIFSQAGVTIGGGIQT-----DAA 190 (340)
Q Consensus 125 ~~~~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~~-----~~~~~G~vs~~~~~~~~~~~~~~~~~i~~-----d~~ 190 (340)
+.+. ..+.|+.|.... .+..|+.+++.||..... .......+.-+ ...-.. ..+-. ...
T Consensus 95 ~~~~~~~~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~-~~~C~~------~~~Ca~~~~~~~~ 167 (218)
T 2z7f_E 95 NGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRGIASVLQELNVTVV-TSLCRR------SNVCTLVRGRQAG 167 (218)
T ss_dssp SSCCCCSSSCCCCCCCCTTCCCCTTCEEEEEESSBCSSSCCBCSBCEEEEEEEE-CTTCCT------TSEEEECTTSCCB
T ss_pred CCcCcCCCceeccCcCCCCCCCCCCCEEEEEEeCCCCCCCCccchheEeeeEEe-hhHcCc------ceeeeccCCCCCe
Confidence 8763 346777776443 346799999999864321 22233223222 110000 01211 345
Q ss_pred cCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHH
Q 019504 191 INPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLI 241 (340)
Q Consensus 191 i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~ 241 (340)
.|.|+|||||+. +|.++||+++....++.....+....+...++|+++.+
T Consensus 168 ~C~GDSGgPl~~-~~~l~Gi~S~~~g~C~~~~~p~vyt~V~~~~~WI~~~~ 217 (218)
T 2z7f_E 168 VCFGDSGSPLVC-NGLIHGIASFVRGGCASGLYPDAFAPVAQFVNWIDSII 217 (218)
T ss_dssp CCTTCTTCEEEE-TTEEEEEEEEESSSTTCSSSCEEEEEGGGGHHHHHHHH
T ss_pred eCCCcCCCceEE-ccEEEEEEEeCCccCCCCCCCeEEEEHHHhHHHHHHHh
Confidence 789999999995 78999999983222433333567788888888888754
No 51
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2
Probab=99.40 E-value=3e-11 Score=105.75 Aligned_cols=172 Identities=19% Similarity=0.189 Sum_probs=102.3
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEec-----CCceeEEEEEEEEeC------------------
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILAS-----DGVQKNFEGKLVGAD------------------ 114 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~-----~g~~~~~~a~v~~~d------------------ 114 (340)
..+|.+|+++ ||||+|||+.... .+.+-.. +.....+..+-+..+
T Consensus 23 ~CgGsLIs~~-~VLTAAHC~~~~~-----------~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~ 90 (235)
T 1ton_A 23 LCGGVLIDPS-WVITAAHCYSNNY-----------QVLLGRNNLFKDEPFAQRRLVRQSFRHPDYIPLIVTNDTEQPVHD 90 (235)
T ss_dssp EEEEEEEETT-EEEECGGGCCSCC-----------EEEESCSBTTSCCTTCEEECEEEEEECTTCCCC--------CCCC
T ss_pred eEEEEEecCC-EEEEcHHhCCCCc-----------EEEeCcccccCCCCcceEEEEEEEEeCCCCcccccccccccccCC
Confidence 4899999987 9999999995211 2222111 010112222222222
Q ss_pred CCCcEEEEEEecCC---CCccceeecCCCCCCCCCEEEEEecCCCC------CCceeEEEEeeeccccc-cCC-Cceecc
Q 019504 115 RAKDLAVLKIEASE---DLLKPINVGQSSFLKVGQQCLAIGNPFGF------DHTLTVGVISGLNRDIF-SQA-GVTIGG 183 (340)
Q Consensus 115 ~~~DlAlL~v~~~~---~~~~~~~l~~~~~~~~G~~v~~iG~p~g~------~~~~~~G~vs~~~~~~~-~~~-~~~~~~ 183 (340)
...|||||+++.+. ..+.|+.|... .+..|+.+++.||.... ...+....+.-+....- ... ......
T Consensus 91 ~~~DIALl~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~ 169 (235)
T 1ton_A 91 HSNDLMLLHLSEPADITGGVKVIDLPTK-EPKVGSTCLASGWGSTNPSEMVVSHDLQCVNIHLLSNEKCIETYKDNVTDV 169 (235)
T ss_dssp STTCCEEEEESSCCCCCSSCCCCCCCCS-CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECGGGCGGGGSTTGGGG
T ss_pred CcCCEEEEEcCCccccCCcceeeeCCCC-CCCCCCEEEEEecCCCCCCCCccCccceEEEEEEeCHHHHHHHhcCcCCCC
Confidence 23599999998763 34678888643 46789999999986432 12233333332221110 000 000112
Q ss_pred eEEE-----eeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHc
Q 019504 184 GIQT-----DAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQY 243 (340)
Q Consensus 184 ~i~~-----d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 243 (340)
++-. ....|.|+|||||+- +|.++||+++....++.....+...-+...++|+++.++.
T Consensus 170 ~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~ 233 (235)
T 1ton_A 170 MLCAGEMEGGKDTCAGDSGGPLIC-DGVLQGITSGGATPCAKPKTPAIYAKLIKFTSWIKKVMKE 233 (235)
T ss_dssp EEEEECTTCSCBCCTTCTTCEEEE-TTEEEEEECCCCSSCSCTTCCEEEEEGGGGHHHHHHHHHH
T ss_pred eEeeccCCCCCcCCCCCCccccEE-CCEEEEEEeeCCCCCCCCCCCeEEEEHHHHHHHHHHHHcc
Confidence 2222 235789999999995 7899999998744444333456778888899999887653
No 52
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*
Probab=99.39 E-value=2.2e-11 Score=106.09 Aligned_cols=169 Identities=21% Similarity=0.230 Sum_probs=102.5
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEec------CCceeEEEEEEEEeCC-------CCcEEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILAS------DGVQKNFEGKLVGADR-------AKDLAVLKI 124 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~------~g~~~~~~a~v~~~d~-------~~DlAlL~v 124 (340)
..+|.+|+++ ||||+|||+.... .+.+-.. +.....+...-+..++ ..|||||++
T Consensus 26 ~CgGtLIs~~-~VLTAAHC~~~~~-----------~v~~G~~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L 93 (227)
T 2psx_A 26 YCGAVLVHPQ-WLLTAAHCRKKVF-----------RVRLGHYSLSPVYESGQQMFQGVKSIPHPGYSHPGHSNDLMLIKL 93 (227)
T ss_dssp EEEEEEEETT-EEEECGGGCCSSC-----------EEEESCCBSSCCCCTTCEEEEEEEEEECTTCCSSSCTTCCEEEEE
T ss_pred eEEEEEEcCC-EEEEhHHcCCCCc-----------EEEEeeeecccCCCCCcEEEEEEEEEeCCCCCCCCCCCCEEEEEe
Confidence 4899999987 9999999987421 2322111 1111233333333343 459999999
Q ss_pred ecCC---CCccceeecCCCCCCCCCEEEEEecCCCC------CCceeEEEEeeeccc----cccCCCceecceEEE----
Q 019504 125 EASE---DLLKPINVGQSSFLKVGQQCLAIGNPFGF------DHTLTVGVISGLNRD----IFSQAGVTIGGGIQT---- 187 (340)
Q Consensus 125 ~~~~---~~~~~~~l~~~~~~~~G~~v~~iG~p~g~------~~~~~~G~vs~~~~~----~~~~~~~~~~~~i~~---- 187 (340)
+.+- ..+.|+.|.. ..+..|+.+++.||.... ........+.-+... .... .....++-.
T Consensus 94 ~~~~~~~~~v~pi~l~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~--~~~~~~~Ca~~~~ 170 (227)
T 2psx_A 94 NRRIRPTKDVRPINVSS-HCPSAGTKCLVSGWGTTKSPQVHFPKVLQCLNISVLSQKRCEDAYPR--QIDDTMFCAGDKA 170 (227)
T ss_dssp SSCCCCCSSSCCCCBCS-SCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEBCCHHHHHHHSTT--TCCTTEEEECCST
T ss_pred CCCCCCCCceeeeECCC-CCCCCCCEEEEEeCcccCCCCCCCCchheEEEEEecCHhHhhhhcCC--CCCCCEEcccCCC
Confidence 8763 3467888864 456789999999986432 122333333322210 0100 000112222
Q ss_pred eeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 188 DAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 188 d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
....|.|+|||||+. ++.++||++++...+......+....+...++|+++.++
T Consensus 171 ~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 224 (227)
T 2psx_A 171 GRDSCQGDSGGPVVC-NGSLQGLVSWGDYPCARPNRPGVYTNLCKFTKWIQETIQ 224 (227)
T ss_dssp TCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGCHHHHHHHHH
T ss_pred CCccCCCCCCcceee-CCEEEEEEeecCCCCCCCCCCcEEEEHHHhHHHHHHHHh
Confidence 235689999999995 679999999874334333345677888888899888765
No 53
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.39 E-value=2e-11 Score=106.13 Aligned_cols=168 Identities=17% Similarity=0.199 Sum_probs=102.0
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC-------CceeEEEEEEEEeCC-------CCcEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD-------GVQKNFEGKLVGADR-------AKDLAVLK 123 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~-------g~~~~~~a~v~~~d~-------~~DlAlL~ 123 (340)
..+|.+|+++ ||||+|||+.. .+.|.+.. +....+..+-+..++ ..|||||+
T Consensus 24 ~CgGsLIs~~-~VLTAAHC~~~-------------~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~ 89 (223)
T 3mfj_A 24 FCGGSLINSQ-WVVSAAHCYKS-------------GIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIK 89 (223)
T ss_dssp EEEEEEEETT-EEEECGGGCCS-------------SCEEEESCSSTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEE
T ss_pred EEEEEEecCC-EEEEhHHhcCC-------------CcEEEECCceecccCCCcEEEEeeEEEECCCCCCCCCCCCEEEEE
Confidence 4899999987 99999999942 12233211 111233333344443 36999999
Q ss_pred EecCC---CCccceeecCCCCCCCCCEEEEEecCCCC------CCceeEEEEeeecccc--ccCCCceecceEEE-----
Q 019504 124 IEASE---DLLKPINVGQSSFLKVGQQCLAIGNPFGF------DHTLTVGVISGLNRDI--FSQAGVTIGGGIQT----- 187 (340)
Q Consensus 124 v~~~~---~~~~~~~l~~~~~~~~G~~v~~iG~p~g~------~~~~~~G~vs~~~~~~--~~~~~~~~~~~i~~----- 187 (340)
++.+. ..+.|+.|... ....|+.+++.||.... ........+.-+.... ..........++-.
T Consensus 90 L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~ 168 (223)
T 3mfj_A 90 LKSAASLNSRVASISLPTS-CASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEG 168 (223)
T ss_dssp ESSCCCCBTTBCCCBCCSS-CCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEEESCTTS
T ss_pred eCCCcccCCcEeeeECCCC-CCCCCCEEEEEeeeccCCCCCcccchheEEEEEEeCHHHhhhhhcCcCCCCEEEccCCCC
Confidence 98763 34678888644 45789999999986432 1223333333222100 00000001122322
Q ss_pred eeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 188 DAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 188 d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
....|.|+|||||+. +|+++||+++... ++.....+....+...++|+++.++
T Consensus 169 ~~~~C~GDSGgPL~~-~~~l~GI~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~i~ 221 (223)
T 3mfj_A 169 GKDSCQGDSGGPVVC-SGKLQGIVSWGSG-CAQKNKPGVYTKVCNYVSWIKQTIA 221 (223)
T ss_dssp SCBCCTTCTTCEEEE-TTEEEEEEEECSS-SSBTTBCEEEEEGGGGHHHHHHHHH
T ss_pred CCCcCCCCcccceEE-CCEEEEEEEECCC-CCCCCCCeEEEEHHHhHHHHHHHHh
Confidence 235789999999996 7899999998743 3322345667888888999887664
No 54
>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.39 E-value=1.7e-11 Score=106.38 Aligned_cols=170 Identities=18% Similarity=0.204 Sum_probs=103.4
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEec-----CCceeEEEEEEEEeCC-------CCcEEEEEEe
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILAS-----DGVQKNFEGKLVGADR-------AKDLAVLKIE 125 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~-----~g~~~~~~a~v~~~d~-------~~DlAlL~v~ 125 (340)
..+|.+|+++ ||||+|||+.... .+.+-.. ++....+...-+..++ ..|||||+++
T Consensus 24 ~C~GtLI~~~-~VLTAAhC~~~~~-----------~v~~g~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIAll~L~ 91 (223)
T 4i8h_A 24 FCGGSLINSQ-WVVSAAHCYKSGI-----------QVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLK 91 (223)
T ss_dssp EEEEEECSSS-EEEECGGGCCSSC-----------EEEESCSSTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred EEEEEEEcCC-EEEecHHhCCCCc-----------EEEEccccccccCCCcEEEEEeEEEECcCCCCCCCcCCEEEEEEC
Confidence 4899999987 9999999997421 2332111 1111233444444454 3699999998
Q ss_pred cCC---CCccceeecCCCCCCCCCEEEEEecCCCCC------CceeEEEEeeecccc--ccCCCceecceEEE-----ee
Q 019504 126 ASE---DLLKPINVGQSSFLKVGQQCLAIGNPFGFD------HTLTVGVISGLNRDI--FSQAGVTIGGGIQT-----DA 189 (340)
Q Consensus 126 ~~~---~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~------~~~~~G~vs~~~~~~--~~~~~~~~~~~i~~-----d~ 189 (340)
.+. ..+.|+.|... ....|+.+++.||..... .......+.-+.... ..........++-. ..
T Consensus 92 ~~~~~~~~v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~ 170 (223)
T 4i8h_A 92 SAASLNSRVASISLPTS-CASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGK 170 (223)
T ss_dssp SCCCCBTTBCCCBCCSS-CCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEEESCTTSSC
T ss_pred CcCcCCCceeceECCCC-CCCCCCEEEEEecccccCCCCCccccceEEEeeecCHHHHHHhhCCCCCCCeEeccCCCCCC
Confidence 763 34678888644 467899999999864321 123333333222100 00000001122222 24
Q ss_pred ccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 190 AINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 190 ~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
..|.|+|||||+. +++++||+++.... ......+....+...++|+++.++
T Consensus 171 ~~C~GDsGgPl~~-~~~l~Gi~S~g~~c-~~~~~p~vyt~v~~~~~WI~~~i~ 221 (223)
T 4i8h_A 171 DSCQGDSGGPVVC-SGKLQGIVSWGSGC-AQKNKPGVYTKVCNYVSWIKQTIA 221 (223)
T ss_dssp BCCTTCTTCEEEE-TTEEEEEEEECSSS-SCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred ccCCCCCCCcEEE-CCEEEEEEEcCCCC-CCCCCCeEEEEHHHHHHHHHHHHh
Confidence 5688999999995 68999999987543 222345677888889999988765
No 55
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Probab=99.38 E-value=4.8e-11 Score=103.91 Aligned_cols=166 Identities=17% Similarity=0.194 Sum_probs=100.9
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC-------ceeEEEEEEEEeCC-------CCcEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG-------VQKNFEGKLVGADR-------AKDLAVLK 123 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g-------~~~~~~a~v~~~d~-------~~DlAlL~ 123 (340)
..+|.+|+++ ||||+|||+.. .+.|.+... ....+..+-+..++ ..|||||+
T Consensus 28 ~CgGtLI~~~-~VLTAAHC~~~-------------~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~ 93 (227)
T 1iau_A 28 RCGGFLIRDD-FVLTAAHCWGS-------------SINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQ 93 (227)
T ss_dssp EEEEEEEETT-EEEECGGGCCS-------------EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEE
T ss_pred EEEEEEEcCC-EEEECHHhCCC-------------ceEEEEccccccCCCCccEEEEEEEEECCCCCCCCCCCCCeEEEE
Confidence 4889999987 99999999964 233443211 11234444444443 35999999
Q ss_pred EecCC---CCccceeecCCC-CCCCCCEEEEEecCCCC-----CCceeEEEEeeeccc----cccCCCceecceEEE---
Q 019504 124 IEASE---DLLKPINVGQSS-FLKVGQQCLAIGNPFGF-----DHTLTVGVISGLNRD----IFSQAGVTIGGGIQT--- 187 (340)
Q Consensus 124 v~~~~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~-----~~~~~~G~vs~~~~~----~~~~~~~~~~~~i~~--- 187 (340)
++.+. ..+.|+.|.... .+..|+.+++.||.... ........+.-+... ..... ......+-.
T Consensus 94 L~~~~~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~-~~~~~~~Ca~~~ 172 (227)
T 1iau_A 94 LERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDLRHY-YDSTIELCVGDP 172 (227)
T ss_dssp ESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHHHTTTT-CCTTTEEEESCT
T ss_pred ECCcccCCCceecccCCCCCCCCCCCCEEEEEEcccCCCCCCcCceeeEeeeeeechHHhhhHhccc-cCCCcEEEeECC
Confidence 98763 346777776443 34689999999986432 122333333322210 00000 000012222
Q ss_pred --eeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 188 --DAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 188 --d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
....+.|+|||||+- +|.++||++++ ++.....+....+...++|+++.++
T Consensus 173 ~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g---c~~~~~p~vyt~v~~~~~WI~~~~~ 225 (227)
T 1iau_A 173 EIKKTSFKGDSGGPLVC-NKVAQGIVSYG---RNNGMPPRACTKVSSFVHWIKKTMK 225 (227)
T ss_dssp TSCCBCCTTCTTSEEEE-TTEEEEEEEEE---CTTSCSCEEEEEGGGGHHHHHHHHH
T ss_pred CCCCeeeecCCCchheE-eeEEEEEEeEe---cCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 245788999999996 68999999987 2212234566788888999887664
No 56
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2
Probab=99.38 E-value=1.6e-11 Score=107.90 Aligned_cols=172 Identities=18% Similarity=0.193 Sum_probs=97.3
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEec-----CCceeEEEEEEEEeC------------------
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILAS-----DGVQKNFEGKLVGAD------------------ 114 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~-----~g~~~~~~a~v~~~d------------------ 114 (340)
..+|.+|+++ ||||+|||+.... .+.+-.. +.....+..+-+..+
T Consensus 28 ~CgGsLIs~~-~VLTAAHC~~~~~-----------~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~ 95 (240)
T 1sgf_A 28 QCGGVLLDRN-WVLTAAHCYNDKY-----------QVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDD 95 (240)
T ss_dssp CEEEEECSSS-EEEECGGGCCSCC-----------EEEECC----C-CTTCEEEEEEEEEECTTSCGGGC----CCTTCB
T ss_pred EEEEEEecCC-EEEECHHhCCCCc-----------eEEeCCcccccCCCCceEEEEEEEEcCCCCcccccccccccccCC
Confidence 4899999987 9999999997321 2222111 111122333323322
Q ss_pred CCCcEEEEEEecCC---CCccceeecCCCCCCCCCEEEEEecCCCCC------CceeEEEEeeecccc-ccCCCcee-cc
Q 019504 115 RAKDLAVLKIEASE---DLLKPINVGQSSFLKVGQQCLAIGNPFGFD------HTLTVGVISGLNRDI-FSQAGVTI-GG 183 (340)
Q Consensus 115 ~~~DlAlL~v~~~~---~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~------~~~~~G~vs~~~~~~-~~~~~~~~-~~ 183 (340)
...|||||+++.+. ..+.|+.|... ....|+.+++.||..... .......+.-+.... ........ ..
T Consensus 96 ~~~DIALl~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~ 174 (240)
T 1sgf_A 96 YSNDLMLLRLSKPADITDVVKPITLPTE-EPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKAHEMKVTDA 174 (240)
T ss_dssp CTTCCEEEEESSCCCCCSSCCCCCCCCS-CCCTTCEEEEC-------C---------CEEEEEECTHHHHTTCSSBCCTT
T ss_pred CCCceEEEEeCCcCcCCCcccccCCCCC-CCCCCCEEEEEecCCCCCCCCCCCccccEEeeeEeCHHHhhhhhCCCcCCC
Confidence 24699999998763 34678888644 457899999999864321 112222222221100 00000000 12
Q ss_pred eEEE-----eeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHc
Q 019504 184 GIQT-----DAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQY 243 (340)
Q Consensus 184 ~i~~-----d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 243 (340)
++-. ....|.|+|||||+. +|.++||+++....++.....+....+...++|+++.++.
T Consensus 175 ~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~ 238 (240)
T 1sgf_A 175 MLCAGEMDGGSYTCEHDSGGPLIC-DGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETMAN 238 (240)
T ss_dssp EEEEEECSSSEEECCCCTTCEEEE-TTEEEEEECCCCSSCCCSSCCEEEEESGGGHHHHHHHHHS
T ss_pred eEeEccCCCCCCCCCCCCcCcEEE-ccEEEEEEEECCCCCCCCCCCeEEEeHHHHHHHHHHHHhc
Confidence 2222 234789999999996 7899999998744444333456678888899999887764
No 57
>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A
Probab=99.38 E-value=2.3e-11 Score=105.96 Aligned_cols=173 Identities=16% Similarity=0.218 Sum_probs=102.8
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC-------ceeEEEEEEEEeCC-------CCcEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG-------VQKNFEGKLVGADR-------AKDLAVLK 123 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g-------~~~~~~a~v~~~d~-------~~DlAlL~ 123 (340)
..+|.+|+++ ||||+|||+..... ..+.|.+... ....+...-+..++ ..|||||+
T Consensus 25 ~CgGtLIs~~-~VLTAAHC~~~~~~---------~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIAll~ 94 (228)
T 2xw9_A 25 LCGGVLVAEQ-WVLSAAHCLEDAAD---------GKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPDSQPDTIDHDLLLLQ 94 (228)
T ss_dssp EEEEEEEETT-EEEECGGGGSSCTT---------CCEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTCCTTCCEEEE
T ss_pred EEEEEEEeCC-EEEEcHHhCCCCCC---------CceEEEEcccccCCCCCcceEEEEEEEEeCCCCCCCCCCCcEEEEE
Confidence 4899999987 99999999975321 1344444221 11234444444443 36999999
Q ss_pred EecCC---CCccceeecCC-CCCCCCCEEEEEecCCCC-----CCceeEEEEeeecc----ccccCCCceecceEEE---
Q 019504 124 IEASE---DLLKPINVGQS-SFLKVGQQCLAIGNPFGF-----DHTLTVGVISGLNR----DIFSQAGVTIGGGIQT--- 187 (340)
Q Consensus 124 v~~~~---~~~~~~~l~~~-~~~~~G~~v~~iG~p~g~-----~~~~~~G~vs~~~~----~~~~~~~~~~~~~i~~--- 187 (340)
++.+. ..+.|+.|... ..+..|+.+++.||.... ........+.-+.. ............++-.
T Consensus 95 L~~~~~~~~~v~pi~l~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~ 174 (228)
T 2xw9_A 95 LSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDRATCNRRTHHDGAITERLMCAESN 174 (228)
T ss_dssp ESSCCCCBTTBCCCCBCCSCCCCCTTC-CEEEESSCCSTTCCCCSBCEEEECCEECHHHHTSTTTTTTCCCTTEEEECCS
T ss_pred eCCCcccCCCeeecccCCcccCCCCCCEEEEEEecccCCCCCCCchheEEEEEEcChhHhcCccccCCcccCCEEecCCC
Confidence 98763 24567777543 345789999999986432 12222222222211 1111000001112222
Q ss_pred eeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHH
Q 019504 188 DAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLI 241 (340)
Q Consensus 188 d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~ 241 (340)
....|.|+|||||+. +|.++||+++....++.....+....+...++|+++.+
T Consensus 175 ~~~~C~GDsGgPL~~-~~~l~Gi~s~g~~~C~~~~~p~vyt~V~~~~~WI~~~i 227 (228)
T 2xw9_A 175 RRDSCKGDAGGPLVC-GGVLEGVVTSGSRVCGNRKKPGIYTRVASYAAWIDSVL 227 (228)
T ss_dssp SCBCCTTCTTCEEEE-TTEEEEEECCSCCCSSCTTSCEEEEEGGGGHHHHHHHH
T ss_pred CCccCCCCCcccEEE-CCEEEEEEeecCCcCCCCCCCcEEEEHHHHHHHHHHHh
Confidence 235788999999996 78999999987644443344566788888999988764
No 58
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Probab=99.38 E-value=2.9e-11 Score=106.04 Aligned_cols=169 Identities=19% Similarity=0.176 Sum_probs=101.8
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEec-----CCceeEEEEEEEEeCC-----------------
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILAS-----DGVQKNFEGKLVGADR----------------- 115 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~-----~g~~~~~~a~v~~~d~----------------- 115 (340)
..+|.+|+++ ||||+|||+.... .+.+-.. +.....+..+-+..++
T Consensus 25 ~CgGtLI~~~-~VLTAAHC~~~~~-----------~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~ 92 (237)
T 1ao5_A 25 ICGGVLLDRN-WVLTAAHCYVDQY-----------EVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMSLLMLQTIPPGAD 92 (237)
T ss_dssp EEEEEEEETT-EEEECTTCCCSSC-----------EEEESCCBSSSCCSSCEECCEEEEEECTTSCGGGGGCSSCCTTCC
T ss_pred EEEEEEeeCC-EEEECHHHCCCCC-----------EEEecccccccCCCCcEEEEEEEEEcCCCcCcccccccccccccC
Confidence 4899999987 9999999995211 2222111 1111122222233332
Q ss_pred -CCcEEEEEEecCC---CCccceeecCCCCCCCCCEEEEEecCCCC------CCceeEEEEeeecc----ccccCCCcee
Q 019504 116 -AKDLAVLKIEASE---DLLKPINVGQSSFLKVGQQCLAIGNPFGF------DHTLTVGVISGLNR----DIFSQAGVTI 181 (340)
Q Consensus 116 -~~DlAlL~v~~~~---~~~~~~~l~~~~~~~~G~~v~~iG~p~g~------~~~~~~G~vs~~~~----~~~~~~~~~~ 181 (340)
..|||||+++.+. ..+.|+.|... .+..|+.+++.||.... ........+.-+.. ..... ...
T Consensus 93 ~~~DIALl~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~--~~~ 169 (237)
T 1ao5_A 93 FSDDLMLLRLSKPADITDVVKPIALPTK-EPKPGSKCLASGWGSITPTRWQKPDDLQCVFITLLPNENCAKVYLQ--KVT 169 (237)
T ss_dssp CTTCCEEEEESSCCCCCSSSCCCCCCCS-CCCTTCEEEEEESCCSSCC-CCCCSBCEEEEEEEECHHHHHHHCSS--CCC
T ss_pred CCCCEEEEEeCCccccCCceeCCCcCCC-CCCCCCEEEEEECCccCCCCCCCCCcccEEEEEecChhHhhhhhcc--cCC
Confidence 6799999998763 34678888643 45789999999986421 12233333332221 00100 000
Q ss_pred cceEEE-----eeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 182 GGGIQT-----DAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 182 ~~~i~~-----d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
..++-. ....|.|+|||||+- +|.++||+++....++.....+....+...++|+++.++
T Consensus 170 ~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 234 (237)
T 1ao5_A 170 DVMLCAGEMGGGKDTCRDDSGGPLIC-DGILQGTTSYGPVPCGKPGVPAIYTNLIKFNSWIKDTMM 234 (237)
T ss_dssp TTEEEEECTTCSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEECGGGGHHHHHHHHH
T ss_pred CCEEEEccCCCCCCCCCCCCcceEEE-CCEEeEEEeEcCCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 122222 235789999999996 789999999874444433345677888889999988765
No 59
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2
Probab=99.37 E-value=1.1e-11 Score=108.75 Aligned_cols=171 Identities=16% Similarity=0.139 Sum_probs=99.1
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC-----CceeEEEEEEEEeCC-----------------
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD-----GVQKNFEGKLVGADR----------------- 115 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~-----g~~~~~~a~v~~~d~----------------- 115 (340)
..+|.+|+++ ||||+|||+.... .+.+-..+ .....+..+-+..++
T Consensus 25 ~CgGsLIs~~-~VLTAAHC~~~~~-----------~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~~~~~~~~ 92 (237)
T 1gvz_A 25 QCGGVLVHPQ-WVLTAAHCMSDDY-----------QIWLGRHNLSKDEDTAQFHQVSDSFLDPQFDLSLLKKKYLRPYDD 92 (237)
T ss_dssp EEEEEEEETT-EEEECGGGCCSSC-----------EEEESCSBTTSCCTTCEEECEEEEEECTTSCGGGGGCSSCCTTSC
T ss_pred EEEeEEeeCC-EEEEcHHhCCCCC-----------eEEEeecccccCCCCceEEEeeeEecCCccCcccccccccccccc
Confidence 4899999987 9999999996211 22221110 111233333334443
Q ss_pred -CCcEEEEEEecCC---CCccceeecCCCCCCCCCEEEEEecCCCC-CC-----ceeEEEEeeeccccc-cCCCcee-cc
Q 019504 116 -AKDLAVLKIEASE---DLLKPINVGQSSFLKVGQQCLAIGNPFGF-DH-----TLTVGVISGLNRDIF-SQAGVTI-GG 183 (340)
Q Consensus 116 -~~DlAlL~v~~~~---~~~~~~~l~~~~~~~~G~~v~~iG~p~g~-~~-----~~~~G~vs~~~~~~~-~~~~~~~-~~ 183 (340)
..|||||+++.+. ..+.|+.|... ....|+.+++.||.... .. ......+.-+....- ....... ..
T Consensus 93 ~~~DIALl~L~~~~~~~~~v~picLp~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~ 171 (237)
T 1gvz_A 93 ISHDLMLLRLAQPARITDAVKILDLPTQ-EPKLGSTCYTSGWGLISTFTNRGSGTLQCVELRLQSNEKCARAYPEKMTEF 171 (237)
T ss_dssp CTTCCEEEEESSCCCCBTTBCCCCCCSS-CCCTTCEEEEEEEECSCTTTCSEEEEEEEEEEEEECGGGGCSSCGGGCCTT
T ss_pred cCCceEEEEeCCCcccCCcEeeeECCCC-CCCCCCEEEEECCCcccCCCCCCCCccEEEEEeEeChhHhhhhhhhcCCCc
Confidence 6799999999763 34678888644 45789999999986431 11 112222222211100 0000000 11
Q ss_pred eEEE-----eeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 184 GIQT-----DAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 184 ~i~~-----d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
++-. ....|.|+|||||+- +|.++||++++...++.....+....+...++|+++.++
T Consensus 172 ~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 234 (237)
T 1gvz_A 172 VLCATHRDDSGSICLGDSGGALIC-DGVFQGITSWGYSECADFNDNFVFTKVMPHKKWIKETIE 234 (237)
T ss_dssp EEEEECSSTTCEECGGGTTCEEEE-TTEEEEEECCCSSSCEETTTSCCEEESGGGHHHHHHHHH
T ss_pred eEEEeeCCCCCccCCCCccCcEee-CCEEEEEEEeCCCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 2222 234688999999995 789999999875333322223456777788888887654
No 60
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}
Probab=99.37 E-value=2.4e-11 Score=106.55 Aligned_cols=171 Identities=19% Similarity=0.198 Sum_probs=101.3
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEec-----CCceeEEEEEEEEeCC-----------------
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILAS-----DGVQKNFEGKLVGADR----------------- 115 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~-----~g~~~~~~a~v~~~d~----------------- 115 (340)
..+|.+|+++ ||||+|||+.... .+.+-.. +.....+..+-+..++
T Consensus 25 ~CgGsLIs~~-~VLTAAHC~~~~~-----------~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~~~~~~~~ 92 (238)
T 1spj_A 25 QCGGILVHRQ-WVLTAAHCISDNY-----------QLWLGRHNLFDDENTAQFVHVSESFPHPGFNMSLLENHTRQADED 92 (238)
T ss_dssp EEEEEEEETT-EEEECGGGCCSSE-----------EEEESCSBTTSCCTTCEEECEEEEEECTTSCGGGGCC--CTTTCC
T ss_pred eEEEEEecCC-EEEEcHHhCCCCc-----------eEEEEeccccCCCCCceEEEEEEEEcCCCcccccccccccccccc
Confidence 4899999987 9999999996421 2222111 0111223333233332
Q ss_pred -CCcEEEEEEecCC----CCccceeecCCCCCCCCCEEEEEecCCCC------CCceeEEEEeeecccc--ccCCCceec
Q 019504 116 -AKDLAVLKIEASE----DLLKPINVGQSSFLKVGQQCLAIGNPFGF------DHTLTVGVISGLNRDI--FSQAGVTIG 182 (340)
Q Consensus 116 -~~DlAlL~v~~~~----~~~~~~~l~~~~~~~~G~~v~~iG~p~g~------~~~~~~G~vs~~~~~~--~~~~~~~~~ 182 (340)
..|||||+++.+. ..+.|+.|.. .....|+.+++.||.... ........+.-+.... .........
T Consensus 93 ~~~DIALl~L~~~~~~~~~~v~pi~L~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~ 171 (238)
T 1spj_A 93 YSHDLMLLRLTEPADTITDAVKVVELPT-EEPEVGSTCLASGWGSIEPENFSFPDDLQCVDLKILPNDECKKAHVQKVTD 171 (238)
T ss_dssp CTTCCEEEEESSCCCCSSTTCCCCCCCS-SCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHHCSSCCCT
T ss_pred CCCCeEEEEECccccccCCceeeccCCC-CCCCCCCEEEEEecCCCCCCCCCCcCcccEEEEeecCHHHhhhhccCCCCC
Confidence 3599999998763 2467788864 345679999999986421 1223333333222110 000000001
Q ss_pred ceEEE-----eeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 183 GGIQT-----DAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 183 ~~i~~-----d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
.++-. ....|.|+|||||+- ++.++||++++...++.....+....+...++|+++.++
T Consensus 172 ~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~ 235 (238)
T 1spj_A 172 FMLCVGHLEGGKDTCVGDSGGPLMC-DGVLQGVTSWGYVPCGTPNKPSVAVRVLSYVKWIEDTIA 235 (238)
T ss_dssp TEEEEECTTCSSBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CeEEeeCCCCCCCCCCCCCCCcEEE-cCEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHHHhh
Confidence 22222 235789999999995 689999999875444433345667788888999988765
No 61
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Probab=99.37 E-value=2.3e-11 Score=106.87 Aligned_cols=174 Identities=16% Similarity=0.199 Sum_probs=102.8
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC-------CceeEEEEEEEEeCC-------CCcEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD-------GVQKNFEGKLVGADR-------AKDLAVLK 123 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~-------g~~~~~~a~v~~~d~-------~~DlAlL~ 123 (340)
..+|.+|+++ ||||+|||+...... ..+.|.+.. .....+..+-+..++ ..|||||+
T Consensus 27 ~CgGtLIs~~-~VLTAAHC~~~~~~~--------~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~ 97 (240)
T 1mza_A 27 VCGGVLIDPQ-WVLTAAHCQYRFTKG--------QSPTVVLGAHSLSKNEASKQTLEIKKFIPFSRVTSDPQSNDIMLVK 97 (240)
T ss_dssp EEEEEEEETT-EEEECGGGSCTTCSC--------SCEEEEESCSBSSSCCTTCEEEEEEEEEECCCSSCSSSSSCCEEEE
T ss_pred EEEEEEecCC-EEEECHHhCCCCCCC--------CCeEEEeCceecCCCCCceEEEEEEEEEeCCCccCCCCCceEEEEE
Confidence 4899999987 999999998743211 033444321 111234433344443 36999999
Q ss_pred EecCC---CCccceeecCCCCCCCCCEEEEEecCCCC------CCceeEEEEeeeccc------cccCCCceecceEEE-
Q 019504 124 IEASE---DLLKPINVGQSSFLKVGQQCLAIGNPFGF------DHTLTVGVISGLNRD------IFSQAGVTIGGGIQT- 187 (340)
Q Consensus 124 v~~~~---~~~~~~~l~~~~~~~~G~~v~~iG~p~g~------~~~~~~G~vs~~~~~------~~~~~~~~~~~~i~~- 187 (340)
++.+. ..+.|+.|.....+..|+.+++.||.... ........+.-+... ...........++-.
T Consensus 98 L~~~~~~~~~v~pi~l~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~Ca~ 177 (240)
T 1mza_A 98 LQTAAKLNKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDSLRPSDTLREVTVTVLSRKLCNSQSYYNGDPFITKDMVCAG 177 (240)
T ss_dssp ESSCCCCBTTBCCCCBCSSCCCCTTCEEEEEECCCSSTTCSSCCSBCEEEEEEECCHHHHTSTTTTTTTTCCCTTEEEEE
T ss_pred eCCCcccCCceeeeecCCcccCCCCCEEEEEeCCcCCCCCCCccccceEeEEEEeCHHHcCCcceeCCCCcCCCCeEeec
Confidence 98763 34677888653556789999999986432 122333333322211 110000001122222
Q ss_pred ----eeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHh-HHHHHHHHHH
Q 019504 188 ----DAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSST-VLKIVPQLIQ 242 (340)
Q Consensus 188 ----d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~-i~~~l~~l~~ 242 (340)
....|.|+|||||+- +|.++||+++... ++.....+....+.. .++|+++.++
T Consensus 178 ~~~~~~~~C~GDSGGPL~~-~~~l~Gi~S~g~~-C~~~~~p~vyt~v~~~y~~WI~~~~~ 235 (240)
T 1mza_A 178 DAKGQKDSCKGDAGGPLIC-KGVFHAIVSGGHE-CGVATKPGIYTLLTKKYQTWIKSNLV 235 (240)
T ss_dssp CTTSCCCCCTTCTTCEEEE-TTEEEEEECSSCC-SSCTTCCEEEEECCHHHHHHHHHHTC
T ss_pred CCCCCCccCCCCCCCeeEE-CCEEEEEEEECCC-CCCCCCCcEEEeChHHHHHHHHHhcc
Confidence 235789999999995 7899999998753 332233455566666 8888887654
No 62
>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*
Probab=99.37 E-value=4.5e-11 Score=103.90 Aligned_cols=169 Identities=18% Similarity=0.181 Sum_probs=101.5
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEec-----CCceeEEEEEEEEeCCC-------CcEEEEEEe
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILAS-----DGVQKNFEGKLVGADRA-------KDLAVLKIE 125 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~-----~g~~~~~~a~v~~~d~~-------~DlAlL~v~ 125 (340)
..+|.+|+++ ||||+|||+.... .+.+-.. +.....+..+-+..++. .|||||+++
T Consensus 28 ~CgGsLI~~~-~VLTAAHC~~~~~-----------~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 95 (224)
T 1cgh_A 28 RCGGFLVRED-FVLTAAHCWGSNI-----------NVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLS 95 (224)
T ss_dssp EEEEEEEETT-EEEECGGGCCSSE-----------EEEESCSBTTSCCTTCEEEEEEEEEECTTCBTTTTBSCCEEEEES
T ss_pred EEEEEEeeCC-EEEEhHHhCCCCC-----------EEEEeecccCCCCCccEEEEEEEEEcCCCCCCCCCcCCEEEEEEC
Confidence 5899999987 9999999997521 3332111 11112344444444543 599999998
Q ss_pred cCC---CCccceeecCCC-CCCCCCEEEEEecCCCC----CCceeEEEEeeecccc-c-cCCCceecceEEE-----eec
Q 019504 126 ASE---DLLKPINVGQSS-FLKVGQQCLAIGNPFGF----DHTLTVGVISGLNRDI-F-SQAGVTIGGGIQT-----DAA 190 (340)
Q Consensus 126 ~~~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~----~~~~~~G~vs~~~~~~-~-~~~~~~~~~~i~~-----d~~ 190 (340)
.+- ..+.|+.|.... .+..|+.+++.||.... ........+.-+.... . ..........+-. ...
T Consensus 96 ~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~ 175 (224)
T 1cgh_A 96 RRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRVQRDRQCLRIFGSYDPRRQICVGDRRERKA 175 (224)
T ss_dssp SCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCCSBCEEEEEEBCCHHHHHHHCTTCCTTTEEEECCTTSCCB
T ss_pred CCCcCCCceEeeECCCCCCCCCCCCEEEEEECCcCCCCCCCCcceEEEEEeeCHHHHHHHhCcCCCcceEeeccCCCCCe
Confidence 763 346778886443 35689999999986432 1223333333222100 0 0000000112322 235
Q ss_pred cCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 191 INPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 191 i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
.|.|+|||||+- +|.++||+++.. .. ....+....+...++|+++.++
T Consensus 176 ~C~GDSGgPL~~-~~~l~Gi~S~g~-~~--~~~p~vyt~V~~~~~WI~~~~~ 223 (224)
T 1cgh_A 176 AFKGDSGGPLLC-NNVAHGIVSYGK-SS--GVPPEVFTRVSSFLPWIRTTMR 223 (224)
T ss_dssp CCTTCTTCEEEE-TTEEEEEEEECC-TT--CCSCEEEEEGGGGHHHHHHHHH
T ss_pred EeeCCCccceEE-ccEEEEEEEEEC-CC--CCCCeEEEEHHHhHHHHHHHhh
Confidence 788999999996 789999999875 21 1234566788888888887654
No 63
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2
Probab=99.36 E-value=7.9e-11 Score=103.53 Aligned_cols=173 Identities=18% Similarity=0.164 Sum_probs=102.9
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC-------ceeEEEEEEEEeCCC---------CcEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG-------VQKNFEGKLVGADRA---------KDLAV 121 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g-------~~~~~~a~v~~~d~~---------~DlAl 121 (340)
..+|.+|+++ ||||+|||+.... .+.|.+... ....+..+-+..++. .||||
T Consensus 29 ~CgGtLI~~~-~VLTAAHC~~~~~-----------~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIAL 96 (241)
T 1bru_P 29 TCGGTLVDQS-WVLTAAHCISSSR-----------TYRVVLGRHSLSTNEPGSLAVKVSKLVVHQDWNSNQLSNGNDIAL 96 (241)
T ss_dssp EEEEEEEETT-EEEECGGGCCTTS-----------CEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTCGGGCCCCEE
T ss_pred EEEeEEeeCC-EEEEcHHhcccCC-----------ceEEEEEcccccCCCCccEEEEEEEEEECCCCCCCCCCCCCcEEE
Confidence 4899999987 9999999997321 344444221 112344443444432 79999
Q ss_pred EEEecCC---CCccceeecCCC-CCCCCCEEEEEecCCCC-----CCceeEEEEeeeccccccC---CCcee-cceEEE-
Q 019504 122 LKIEASE---DLLKPINVGQSS-FLKVGQQCLAIGNPFGF-----DHTLTVGVISGLNRDIFSQ---AGVTI-GGGIQT- 187 (340)
Q Consensus 122 L~v~~~~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~-----~~~~~~G~vs~~~~~~~~~---~~~~~-~~~i~~- 187 (340)
|+++.+- ..+.|+.|.... .+..|+.+++.||.... ........+.-+....-.. .+... ..+|-.
T Consensus 97 l~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~Ca~ 176 (241)
T 1bru_P 97 LKLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNGASPDILQQGQLLVVDYATCSKPGWWGSTVKTNMICAG 176 (241)
T ss_dssp EEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSTTSCCCSBCEEEEEEEECHHHHTSTTTTGGGCCTTEEEEC
T ss_pred EEeCCCcccCCccCCcccCCCcCCCCCCCEEEEEEccccCCCCCCCccceeCEEEEecHHHhCcccccCCcCCCceEeec
Confidence 9998763 346777776443 35679999999986421 1223333333222110000 00001 122222
Q ss_pred ---eeccCCCCccceeecC--CC--cEEEEEeeeee-CCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 188 ---DAAINPGNSGGPLLDS--KG--NLIGINTAIIT-QTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 188 ---d~~i~~G~SGGPl~d~--~G--~VVGi~~~~~~-~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
....|.|+|||||+-. +| .++||++++.. .++.....+...-+...++|+++.++
T Consensus 177 ~~~~~~~C~GDSGgPL~~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 239 (241)
T 1bru_P 177 GDGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSVIA 239 (241)
T ss_dssp CSSSSBCCTTCTTCEEEEECTTSCEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHHH
T ss_pred CCCCCccCCCCCCCcEEEECCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEHHHhHHHHHHHHh
Confidence 2356899999999843 46 79999998752 33322344666788888888887664
No 64
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2
Probab=99.36 E-value=1.1e-10 Score=101.35 Aligned_cols=166 Identities=19% Similarity=0.182 Sum_probs=100.2
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC-------CceeEEEEEEEEeCCC-------CcEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD-------GVQKNFEGKLVGADRA-------KDLAVLK 123 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~-------g~~~~~~a~v~~~d~~-------~DlAlL~ 123 (340)
..+|.+|+++ ||||+|||+.. .+.|.+.. .....+..+-+..++. .|||||+
T Consensus 29 ~CgGtLI~~~-~VLTAAhC~~~-------------~~~v~~g~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~ 94 (224)
T 3rp2_A 29 ICGGFLISRQ-FVLTAAHCKGR-------------EITVILGAHDVRKRESTQQKIKVEKQIIHESYNSVPNLHDIMLLK 94 (224)
T ss_dssp EEEEEESSSS-EEEECGGGCCS-------------EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCSSSCCSCCEEEE
T ss_pred EEEeEEeeCC-EEEEchhcCCC-------------CcEEEEeccccCcCCCCcEEEEEEEEEECCCccCCCCCccEEEEE
Confidence 4899999987 99999999853 34444421 1112344444444543 5999999
Q ss_pred EecCC---CCccceeecCCC-CCCCCCEEEEEecCCCC-----CCceeEEEEeeeccccccC-CCceecceEEE-----e
Q 019504 124 IEASE---DLLKPINVGQSS-FLKVGQQCLAIGNPFGF-----DHTLTVGVISGLNRDIFSQ-AGVTIGGGIQT-----D 188 (340)
Q Consensus 124 v~~~~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~-----~~~~~~G~vs~~~~~~~~~-~~~~~~~~i~~-----d 188 (340)
++.+. ..+.|+.|.... .+..|+.+++.||.... ........+.-+....-.. ........+-. .
T Consensus 95 L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~Ca~~~~~~ 174 (224)
T 3rp2_A 95 LEKKVELTPAVNVVPLPSPSDFIHPGAMCWAAGWGKTGVRDPTSYTLREVELRIMDEKACVDYRYYEYKFQVCVGSPTTL 174 (224)
T ss_dssp ESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSEEETTEEECSBCEEEEEEEECGGGTTTTTCCCTTTEEEECCTTSC
T ss_pred cCCCcccCCcccceecCCcccCCCCCCEEEEEeCCCCCCCCCCCceeeEeeeeecChHHhccccccCcCCEEEecCCCCC
Confidence 98763 345677775433 35689999999985321 1122333332222111100 00001112221 2
Q ss_pred eccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHH
Q 019504 189 AAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLI 241 (340)
Q Consensus 189 ~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~ 241 (340)
...+.|+|||||+. ++.++||++++..... ..+....+...++|+++.+
T Consensus 175 ~~~C~GDsGgPl~~-~~~l~Gi~S~g~~c~~---~p~vyt~v~~y~~WI~~~i 223 (224)
T 3rp2_A 175 RAAFMGDSGGPLLC-AGVAHGIVSYGHPDAK---PPAIFTRVSTYVPWINAVI 223 (224)
T ss_dssp CBCCTTTTTCEEEE-TTEEEEEEEECCTTCC---SCEEEEEHHHHHHHHHHHH
T ss_pred CeeccCCCCCeEEE-cceeeEEEEECCCCCC---CCcEEEEHHHhHHHHHHHh
Confidence 35678999999995 7899999998754321 2566788888999988765
No 65
>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase; 2.40A {Sesbania mosaic virus}
Probab=99.36 E-value=1.1e-11 Score=104.28 Aligned_cols=150 Identities=17% Similarity=0.171 Sum_probs=94.7
Q ss_pred ceEEEEEcCCC--EEEeCccccCCCCCCCCCCCccEEEEEEEecCCcee---EEEEEEEEeCCCCcEEEEEEecCCC---
Q 019504 58 NGSGVVWDGKG--HIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQK---NFEGKLVGADRAKDLAVLKIEASED--- 129 (340)
Q Consensus 58 ~GsGfiI~~~G--~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~---~~~a~v~~~d~~~DlAlL~v~~~~~--- 129 (340)
.|+|+.+..+| +||||+||+..... .+.. ..++... .++..+...|+..|+||++++....
T Consensus 28 ~G~g~~V~~~G~~~LlTA~Hv~~~~~~----------~~~~-~k~g~~ip~~~~~~~~~~~d~~~D~all~vp~~~~s~l 96 (191)
T 1zyo_A 28 IGFGCRTKIDGEDCLLTAHHVWCNSMR----------PTGL-AKAGKQVSVEDWEISMSSSDKMLDFAIVRVPTHVWSKL 96 (191)
T ss_dssp EEEEEEEEC--CEEEEECHHHHTSSSC----------CCEE-EETTEEEECCSCEEEEEECCTTTCEEEEECCHHHHHHH
T ss_pred EEEEEEEEECCCcEEEEChhhCcCCcc----------eeee-cCCCCEEEcccceeeEccCCCCCcEEEEEcCCChhhhc
Confidence 48888885444 99999999976420 1111 1222210 1223344457889999999986521
Q ss_pred CccceeecCCCCCCCCCEEEEEecCCCCCCceeEEEEeeeccccccCCCceecceEEEeeccCCCCccceeecCCCcEEE
Q 019504 130 LLKPINVGQSSFLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSKGNLIG 209 (340)
Q Consensus 130 ~~~~~~l~~~~~~~~G~~v~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d~~G~VVG 209 (340)
..+.+.|. ....++.|.++|+|.........|+.... . . ...+++++...+|.||+|+||.+ .|||
T Consensus 97 g~~~a~~~---~~~~~~~vt~yg~~~~~~~~s~~g~~~~~-----~-~----~~~~~~~~~T~~G~SGsP~~ng~-~IVG 162 (191)
T 1zyo_A 97 GVKSTPLV---CPSSKDVITCYGGSSSDCLMSGVGSSSTS-----E-F----TWKLTHTCPTAAGWSGTPLYSSR-GVVG 162 (191)
T ss_dssp TCCCCCBC---CCCSCEEEEEEEESSTTSEEEEEEEEEEC-----S-S----TTEEEECCCCCTTCTTCEEECSS-CEEE
T ss_pred CcceeEee---cCCCCccEEEEeecCCCCEeecccceeec-----c-C----CcEEEEEcCCCCCCCCCcEEcCC-eEEE
Confidence 13454452 23358999999998654433333322111 1 0 13488999999999999999964 7899
Q ss_pred EEeeeeeCCCCcCceEEEEehHhHHHH
Q 019504 210 INTAIITQTGTSAGVGFAIPSSTVLKI 236 (340)
Q Consensus 210 i~~~~~~~~~~~~~~~~aip~~~i~~~ 236 (340)
|+..... ....|.++-+..++.+
T Consensus 163 vh~G~~~----~~~~N~a~n~~~~~~~ 185 (191)
T 1zyo_A 163 MHVGFEE----IGKLNRGVNMFYVANY 185 (191)
T ss_dssp EEEEEEE----TTTEEEEECHHHHHHH
T ss_pred EEeCccc----CCceeeeeehHHHhhh
Confidence 9997543 2457888888887775
No 66
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Probab=99.36 E-value=2.2e-11 Score=106.03 Aligned_cols=170 Identities=16% Similarity=0.175 Sum_probs=102.1
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC-------ceeEEEEEEEEeCC-------CCcEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG-------VQKNFEGKLVGADR-------AKDLAVLK 123 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g-------~~~~~~a~v~~~d~-------~~DlAlL~ 123 (340)
..+|.+|+++ ||||+|||+.... .+.|.+... ....+..+-+..++ ..|||||+
T Consensus 25 ~CgGtLI~~~-~VLTAAHC~~~~~-----------~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~ 92 (226)
T 1azz_A 25 FCGGSLISPE-WILTAAHCMDGAG-----------FVDVVLGAHNIREDEATQVTIQSTDFTVHENYNSFVISNDIAVIR 92 (226)
T ss_dssp EEEEEEEETT-EEEECHHHHTTCS-----------CEEEEESCSBSSSCCTTCEEEEECCEEECTTCBTTTTBSCCEEEE
T ss_pred EEEEEEecCC-EEEEhHHhcCCCC-----------ceEEEEcceEcCCCCCccEEEEEEEEEECCCCCCCCCCCceEEEE
Confidence 4899999987 9999999997643 344444221 11223333233333 46999999
Q ss_pred EecCC---CCccceeecCCCCCCCCCEEEEEecCCCCC------CceeEEEEeeecccc-ccCCCceecceEEE----ee
Q 019504 124 IEASE---DLLKPINVGQSSFLKVGQQCLAIGNPFGFD------HTLTVGVISGLNRDI-FSQAGVTIGGGIQT----DA 189 (340)
Q Consensus 124 v~~~~---~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~------~~~~~G~vs~~~~~~-~~~~~~~~~~~i~~----d~ 189 (340)
++.+. ..+.|+.|.... ...|+.+++.||..... .......+.-+.... ....+.....++-. ..
T Consensus 93 L~~~~~~~~~v~picL~~~~-~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~Ca~~~~~~ 171 (226)
T 1azz_A 93 LPVPVTLTAAIATVGLPSTD-VGVGTVVTPTGWGLPSDSALGISDVLRQVDVPIMSNADCDAVYGIVTDGNICIDSTGGK 171 (226)
T ss_dssp CSSCCCCCSSSCCCBCCSSC-CCTTCEEEEEESSCSSTTCSSSCSBCEECCEEEECHHHHHHHHSCCCTTEEEECCTTTC
T ss_pred ECCccccCCCcccccCCCCC-CCCCCEEEEEeCCccCCCCCCCCchhEEeeEEEEChhHhhhhhCcCCCceEeecCCCCC
Confidence 98763 346788886444 47899999999864321 122222222221100 00000000122222 23
Q ss_pred ccCCCCccceeecCCCcEEEEEeeeee-CCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 190 AINPGNSGGPLLDSKGNLIGINTAIIT-QTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 190 ~i~~G~SGGPl~d~~G~VVGi~~~~~~-~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
..|.|+|||||+ .+|.++||+++... .+. ....+....+...++|+++.+.
T Consensus 172 ~~C~GDSGgPL~-~~~~l~Gi~S~g~~~~C~-~~~p~vyt~V~~~~~WI~~~~~ 223 (226)
T 1azz_A 172 GTCNGDSGGPLN-YNGLTYGITSFGAAAGCE-AGYPDAFTRVTYFLDWIQTQTG 223 (226)
T ss_dssp BCCTTCTTCEEE-ETTEEEEEEEEEETTCTT-SCCCEEEEESGGGHHHHHHHHC
T ss_pred ccCCCCCCcceE-ECCEEEEEEEEECCCCCC-CCCCCEEEEHHHHHHHHHHHhC
Confidence 578999999999 58899999998763 232 2334566788888999887654
No 67
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}
Probab=99.35 E-value=3.1e-11 Score=105.35 Aligned_cols=174 Identities=14% Similarity=0.149 Sum_probs=105.3
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCc----eeEEEEEEEEeC------CCCcEEEEEEecC
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGV----QKNFEGKLVGAD------RAKDLAVLKIEAS 127 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~----~~~~~a~v~~~d------~~~DlAlL~v~~~ 127 (340)
..+|.+|+++ ||||+|||+..... ..+.|.+.... ...+..+-+..+ ...|||||+++.+
T Consensus 25 ~CgGtLIs~~-~VLTAAHC~~~~~~---------~~~~v~~G~~~~~~~~~~~~v~~i~~h~y~~~~~~~DiAll~L~~~ 94 (235)
T 3h7t_A 25 FCGGSILTAN-FVITAAQCVDGTKP---------SDISIHYGSSYRTTKGTSVMAKKIYIVRYHPLTMQNNYAVIETEMP 94 (235)
T ss_dssp CEEEEESSSS-EEEECHHHHTTCCG---------GGEEEEESCSBSSSSSEEEEEEEEEECSCBTTTTBTCCEEEEESSC
T ss_pred eEeEEEeeCC-EEEECHHHCCCCCC---------CeeEEEcCccccccCCceeeeeeEEeeecCCCCCCCCeEEEEeccc
Confidence 4899999987 99999999974321 13444443211 012332222222 3469999999876
Q ss_pred CC----CccceeecCCC-CCCCCCEEEEEecCCCC------CCceeEEEEeeecc----ccccCC--C-ceecceEEE--
Q 019504 128 ED----LLKPINVGQSS-FLKVGQQCLAIGNPFGF------DHTLTVGVISGLNR----DIFSQA--G-VTIGGGIQT-- 187 (340)
Q Consensus 128 ~~----~~~~~~l~~~~-~~~~G~~v~~iG~p~g~------~~~~~~G~vs~~~~----~~~~~~--~-~~~~~~i~~-- 187 (340)
-. .+.|+.|.... .+..|+.+++.||.... ........+.-+.. ...... . .....++-.
T Consensus 95 v~~~~~~v~pi~Lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~ 174 (235)
T 3h7t_A 95 IKLDDKTTKKIELPSLLYDPEPDTSVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSCEEQYKQIEADKYIYDGVFCAGG 174 (235)
T ss_dssp CCCCSSSCCCCBCCCTTCCCCTTCEEEEEECCCSSTTCCCCCSBCEEEEEEEECHHHHHHHHHTTTCGGGCSTTEEEECB
T ss_pred cccCCccccceecCccccCCCCCCeEEEEecCCCCCCCCchhHHHhhCCCceeCHHHHHHHhhhcccCccccCCeEecCC
Confidence 32 56778886443 26789999999986421 22233333332221 000000 0 000122222
Q ss_pred ---eeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHcC
Q 019504 188 ---DAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQYG 244 (340)
Q Consensus 188 ---d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~~ 244 (340)
....|.|+|||||+. +|+++||+++... ++. ...+....+...++|+++.++..
T Consensus 175 ~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~-C~~-~~p~vyt~v~~~~~WI~~~i~~~ 231 (235)
T 3h7t_A 175 EYDETYIGYGDAGDPAVQ-NGTLVGVASYISS-MPS-EFPSVFLRVGYYVLDIKDIISGK 231 (235)
T ss_dssp TTTTBBCCTTCTTCEEEE-TTEEEEEECCCTT-CCT-TSCEEEEEGGGGHHHHHHHHTTC
T ss_pred CCCCCccccCCCCCceee-CCeEEEEEEecCC-CCC-CCCceEEEHHHHHHHHHHHHhCC
Confidence 345678999999996 8899999998754 332 44567788889999999887654
No 68
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A
Probab=99.35 E-value=6.1e-11 Score=103.09 Aligned_cols=166 Identities=18% Similarity=0.227 Sum_probs=101.4
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC-------CceeEEEEEEEEeCCC-------CcEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD-------GVQKNFEGKLVGADRA-------KDLAVLK 123 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~-------g~~~~~~a~v~~~d~~-------~DlAlL~ 123 (340)
..+|.+|+++ ||||+|||+.. .+.+.+.. .....+..+-+..++. .|||||+
T Consensus 29 ~CgGtLI~~~-~VLTAAHC~~~-------------~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~ 94 (227)
T 3fzz_A 29 FCGGFLVRDK-FVLTAAHCKGR-------------SMTVTLGAHNIKAKEETQQIIPVAKAIPHPDYNPDDRSNDIMLLK 94 (227)
T ss_dssp EEEEEEEETT-EEEECTTCCCE-------------EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEE
T ss_pred EEEEEEEeCC-EEEECcccCCC-------------CcEEEEcccccCCCCCCceEEEEEEEEECcCCCCCCCcCCEEEEE
Confidence 4899999987 99999999842 34444421 1112344444444544 5999999
Q ss_pred EecCC---CCccceeecCCC-CCCCCCEEEEEecCCCC-----CCceeEEEEeeecccc----ccCCCceecceEEE---
Q 019504 124 IEASE---DLLKPINVGQSS-FLKVGQQCLAIGNPFGF-----DHTLTVGVISGLNRDI----FSQAGVTIGGGIQT--- 187 (340)
Q Consensus 124 v~~~~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~-----~~~~~~G~vs~~~~~~----~~~~~~~~~~~i~~--- 187 (340)
++.+. ..+.|+.|.... .+..|+.+++.||.... ........+.-+.... .... ......+-.
T Consensus 95 L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~-~~~~~~~Ca~~~ 173 (227)
T 3fzz_A 95 LVRNAKRTRAVRPLNLPRRNAHVKPGDECYVAGWGKVTPDGEFPKTLHEVKLTVQKDQVCESQFQSS-YNRANEICVGDS 173 (227)
T ss_dssp ESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSCSSTTSCCCSBCEEEEEEBCCHHHHHHHHTTT-CCTTTEEEECCC
T ss_pred ECCcCCCCCcccccCCCCcccCCCCCCEEEEEECCcccCCCCCCCeeeEEEeeeecHHHhhhhhccc-cCCCceEEEeCC
Confidence 98763 346677775433 35789999999986321 1223333333222100 0000 000112221
Q ss_pred --eeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 188 --DAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 188 --d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
....+.|+|||||+. ++.++||++++... . ...+....+...++|+++.++
T Consensus 174 ~~~~~~C~gDsGgPl~~-~~~l~Gi~S~g~~c-~--~~p~vyt~V~~~~~WI~~~i~ 226 (227)
T 3fzz_A 174 KIKGASFEEDSGGPLVC-KRAAAGIVSYGQTD-G--SAPQVFTRVLSFVSWIKKTMK 226 (227)
T ss_dssp SSCBCCTTTTTTCEEEE-TTEEEEEEEECCTT-C--SSSEEEEEGGGTHHHHHHHHT
T ss_pred CCCCcccccCCccceEE-ecCCcEEEEECCCC-C--CCCeEEEEhHHhHHHHHHHHh
Confidence 245678999999995 67999999987543 2 125667888888999987664
No 69
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...
Probab=99.35 E-value=4.6e-11 Score=104.98 Aligned_cols=173 Identities=15% Similarity=0.206 Sum_probs=102.7
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC-------ceeEEEEEEEEeCC---------CCcEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG-------VQKNFEGKLVGADR---------AKDLAV 121 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g-------~~~~~~a~v~~~d~---------~~DlAl 121 (340)
..+|.+|+++ ||||+|||+.... .+.|.+... ....+..+-+..++ ..||||
T Consensus 29 ~CgGsLI~~~-~VLTAAHC~~~~~-----------~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIAL 96 (240)
T 1gvk_B 29 TCGGTLIRQN-WVMTAAHCVDREL-----------TFRVVVGEHNLNQNNGTEQYVGVQKIVVHPYWNTDDVAAGYDIAL 96 (240)
T ss_dssp EEEEEEEETT-EEEECGGGGCSCC-----------CEEEEESCSBTTSCCSCCEEEEEEEEEECTTCCTTCGGGCCCCEE
T ss_pred eEEEEEeeCC-EEEECHHHCCCCc-----------ceEEEECCeecccCCCcceEEEEEEEEECCCCCCCCCCCCCcEEE
Confidence 4899999987 9999999997642 344444221 11233333334443 569999
Q ss_pred EEEecCC---CCccceeecCCC-CCCCCCEEEEEecCCCCC-----CceeEEEEeeeccc---cccCCCcee-cceEEE-
Q 019504 122 LKIEASE---DLLKPINVGQSS-FLKVGQQCLAIGNPFGFD-----HTLTVGVISGLNRD---IFSQAGVTI-GGGIQT- 187 (340)
Q Consensus 122 L~v~~~~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~~-----~~~~~G~vs~~~~~---~~~~~~~~~-~~~i~~- 187 (340)
|+++.+. ..+.|+.|.... .+..|+.+++.||..... ..+....+.-+... .....+... ..++-.
T Consensus 97 l~L~~~v~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~ 176 (240)
T 1gvk_B 97 LRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMVCAG 176 (240)
T ss_dssp EEESSCCCCBTTBCCCCCCCTTCCCCTTCCEEEEESCBSSTTCCBCSBCEEEECCEECHHHHTSTTTTGGGCCTTEEEEC
T ss_pred EEECCccccCCCccceecCCCCCCCCCCCEEEEEecCcCCCCCCcchhccEEEEEEEcHHHhccccccCccCCcceEeec
Confidence 9998763 345677776443 356799999999864321 12222222222110 000000001 122222
Q ss_pred ---eeccCCCCccceeecC-CC--cEEEEEeeeee-CCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 188 ---DAAINPGNSGGPLLDS-KG--NLIGINTAIIT-QTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 188 ---d~~i~~G~SGGPl~d~-~G--~VVGi~~~~~~-~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
....|.|+|||||+-. +| .++||+++... .++.....+...-+...++|+++.++
T Consensus 177 ~~~~~~~C~GDSGgPL~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 238 (240)
T 1gvk_B 177 GDGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINNVIA 238 (240)
T ss_dssp CSSSCBCCTTCTTCEEEEEETTEEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHHH
T ss_pred CCCCCcccCCCCcCceEEEECCcEEEEEEEEEeCCCCCCCCCCCcEEEeHHHHHHHHHHHHh
Confidence 2356899999999853 56 89999998742 33322345667788888888887664
No 70
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Probab=99.34 E-value=6.1e-11 Score=103.76 Aligned_cols=173 Identities=18% Similarity=0.184 Sum_probs=101.3
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEec-----CCceeEEEEEEEEeCC-------CCcEEEEEEe
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILAS-----DGVQKNFEGKLVGADR-------AKDLAVLKIE 125 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~-----~g~~~~~~a~v~~~d~-------~~DlAlL~v~ 125 (340)
..+|.+|+++ ||||+|||+.... ..+.+-.. ++....+..+-+..++ ..|||||+++
T Consensus 25 ~CgGtLIs~~-~VLTAAHC~~~~~----------~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~ 93 (234)
T 1orf_A 25 ICAGALIAKD-WVLTAAHCNLNKR----------SQVILGAHSITREEPTKQIMLVKKEFPYPCYDPATREGDLKLLQLT 93 (234)
T ss_dssp EEEEEEEETT-EEEECTTCCCCTT----------CEEEESCSBSSSCCTTCEEECEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred EEEEEEeeCC-EEEEchhcCCCCC----------ceEEEeccccCcCCCceEEEEEEEEEcCCCCCCCCCCCCEEEEEEC
Confidence 5899999987 9999999997522 12222111 1111233334344443 4699999998
Q ss_pred cCC---CCccceeecCCC-CCCCCCEEEEEecCCCC-----CCceeEEEEeeeccccc---cCCCce---ecceEEE---
Q 019504 126 ASE---DLLKPINVGQSS-FLKVGQQCLAIGNPFGF-----DHTLTVGVISGLNRDIF---SQAGVT---IGGGIQT--- 187 (340)
Q Consensus 126 ~~~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~-----~~~~~~G~vs~~~~~~~---~~~~~~---~~~~i~~--- 187 (340)
.+. ..+.|+.|.... .+..|+.+++.||.... ........+.-+....- ...... ...++-.
T Consensus 94 ~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~Ca~~~ 173 (234)
T 1orf_A 94 EKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTHNSASWSDTLREVEITIIDRKVCNDRNHYNFNPVIGMNMVCAGSL 173 (234)
T ss_dssp SCCCCSSSSCCCCCCSSCCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEEECHHHHTSTTTTTTTTCCCTTEEEEECS
T ss_pred CcCccCCCeeeeecCCCcCCCCCCCEEEEEECCcCCCCCCccccceEeEEEeeCHHHcCCccccccCCccCCCEEEecCC
Confidence 763 346677776443 34689999999986421 12233333333321100 000000 0022222
Q ss_pred --eeccCCCCccceeecCCCcEEEEEeeee-eCCCCcCceEEEEehH-hHHHHHHHHHH
Q 019504 188 --DAAINPGNSGGPLLDSKGNLIGINTAII-TQTGTSAGVGFAIPSS-TVLKIVPQLIQ 242 (340)
Q Consensus 188 --d~~i~~G~SGGPl~d~~G~VVGi~~~~~-~~~~~~~~~~~aip~~-~i~~~l~~l~~ 242 (340)
....|.|+|||||+- +|.++||++++. ..++.....+...-+. ..++|+++.++
T Consensus 174 ~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~~C~~~~~p~vyt~v~~~~~~WI~~~~~ 231 (234)
T 1orf_A 174 RGGRDSCNGDSGSPLLC-EGVFRGVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTIK 231 (234)
T ss_dssp SCCCBCCTTCTTCEEEE-TTEEEEEEEECCTTCTTCTTSCEEEEECCHHHHHHHHHHHC
T ss_pred CCCCcCCCCCCCCeEEE-CCEEEEEEEEcCCCCCCCCCCCCEEEEchHHHHHHHHHHHH
Confidence 235789999999995 789999999875 2343223345566677 78888877653
No 71
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A
Probab=99.34 E-value=3.9e-11 Score=105.48 Aligned_cols=176 Identities=16% Similarity=0.194 Sum_probs=103.9
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC----ceeEEEEEEEEeC--------CCCcEEEEEEe
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG----VQKNFEGKLVGAD--------RAKDLAVLKIE 125 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g----~~~~~~a~v~~~d--------~~~DlAlL~v~ 125 (340)
..+|.+|+++ ||||+|||+..... .+.|.+... ....+..+-+..+ ...|||||+++
T Consensus 25 ~CgGtLIs~~-~VLTAAHC~~~~~~----------~~~v~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~L~ 93 (240)
T 2zgc_A 25 LCGGVLVHPK-WVLTAAHCLAQRMA----------QLRLVLGLHTLDSPGLTFHIKAAIQHPRYKPVPALENDLALLQLD 93 (240)
T ss_dssp EEEEEEEETT-EEEECGGGGCSCGG----------GEEEEESCSBSSSCCEEEEEEEEEECTTCBCTTSCBSCCEEEEES
T ss_pred EEEEEEEcCC-EEEEcHHhcCCCCC----------CEEEEecccccCCCCeEEEEEEEEECCCCCCCCCCcccEEEEEeC
Confidence 4899999987 99999999976431 234443221 1123333333333 34699999998
Q ss_pred cCC---CCccceeecCCC-CCCCCCEEEEEecCCCC-----CCceeEEEEeeeccccc-c--CC-CceecceEEE-----
Q 019504 126 ASE---DLLKPINVGQSS-FLKVGQQCLAIGNPFGF-----DHTLTVGVISGLNRDIF-S--QA-GVTIGGGIQT----- 187 (340)
Q Consensus 126 ~~~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~-----~~~~~~G~vs~~~~~~~-~--~~-~~~~~~~i~~----- 187 (340)
.+. ..+.|+.|.... .+..|+.+++.||.... ........+.-+....- . .. ......++-.
T Consensus 94 ~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~ 173 (240)
T 2zgc_A 94 GKVKPSRTIRPLALPSKRQVVAAGTRCSMAGWGLTHQGGRLSRVLRELDLQVLDTRMCNNSRFWNGSLSPSMVCLAADSK 173 (240)
T ss_dssp SCCCCCSSCCCCCCCCTTCCCCTTCEEEEEECCBSSTTCCBCSBCEEEEEEECCHHHHTSTTTTTTCCCTTEEEEECSST
T ss_pred CcccCCCceeeeEcCCCCCCCCCCCEEEEEECCcccCCCCcCceeeeeeeeecCHHHhCCccccCCCCCCceEeeccCCC
Confidence 763 346777786443 35679999999986432 12233333332221100 0 00 0001122322
Q ss_pred eeccCCCCccceeecC-CCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHcC
Q 019504 188 DAAINPGNSGGPLLDS-KGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQYG 244 (340)
Q Consensus 188 d~~i~~G~SGGPl~d~-~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~~ 244 (340)
....|.|+|||||+-. +..++||+++....++.....+....+...++|+++.++..
T Consensus 174 ~~~~C~GDSGgPL~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~~~ 231 (240)
T 2zgc_A 174 DQAPCKGDSGGPLVCGKGRVLAGVLSFSSRVCTDIFKPPVATAVAPYVSWIRKVTGRS 231 (240)
T ss_dssp TCBCCTTCTTCEEEETTTTEEEEEECCCCSSTTCTTSCCEEEESGGGHHHHHHHHCCC
T ss_pred CCccCCCCccCeeEECCCCEEEEEEEECCCCCCCCCCCcEEEEHHHhHHHHHHHHhhc
Confidence 2356899999999953 23899999987444433233456677888899998877543
No 72
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2
Probab=99.34 E-value=2.5e-11 Score=105.46 Aligned_cols=171 Identities=16% Similarity=0.187 Sum_probs=102.9
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC----CceeEEEEEEEEeCC-------CCcEEEEEEec
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD----GVQKNFEGKLVGADR-------AKDLAVLKIEA 126 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~----g~~~~~~a~v~~~d~-------~~DlAlL~v~~ 126 (340)
..+|.+|+++ ||||+|||+...... ..+.|.+.. .....+..+-+..++ ..|||||+++.
T Consensus 25 ~CgGtLIs~~-~VLTAAHC~~~~~~~--------~~~~v~~G~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~ 95 (222)
T 1eq9_A 25 RCGASILDNN-NVLTAAHCVDGLSNL--------NRLKVHVGTNYLSESGDVYDVEDAVVNKNYDDFLLRNDVALVHLTN 95 (222)
T ss_dssp EEEEEECSSS-EEEECHHHHTTCSCG--------GGEEEEESCSBTTSCCEEEEEEEEEECTTCBTTTTBCCCEEEEESS
T ss_pred EEEEEEeeCC-EEEEhhhcCCCCCCC--------ceEEEEECceecCCCCeEEEEEEEEECCCCCCCCCCCCEEEEEECC
Confidence 4899999977 999999999764210 134444322 111234444444443 36999999987
Q ss_pred CC---CCccceeecCCCCCCCCCEEEEEecCCCC-----CCceeEEEEeeecccc-c-cCCCceecceEEE----eeccC
Q 019504 127 SE---DLLKPINVGQSSFLKVGQQCLAIGNPFGF-----DHTLTVGVISGLNRDI-F-SQAGVTIGGGIQT----DAAIN 192 (340)
Q Consensus 127 ~~---~~~~~~~l~~~~~~~~G~~v~~iG~p~g~-----~~~~~~G~vs~~~~~~-~-~~~~~~~~~~i~~----d~~i~ 192 (340)
+. ..+.|+.|........|+.+++.||.... ........+.-+.... . .... .....+-. ....|
T Consensus 96 ~v~~~~~v~picL~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~-~~~~~~Ca~~~~~~~~C 174 (222)
T 1eq9_A 96 PIKFNDLVQPIKLSTNDEDLESNPCTLTGWGSTRLGGNTPNALQEIELIVHPQKQCERDQWR-VIDSHICTLTKRGEGAC 174 (222)
T ss_dssp CCCCBTTBCCCEECSCCTTCTTSEEEEEECCCSSTTCCCCSBCEEEEEEEECHHHHHHHSSS-CCTTEEEECCCTTCBCC
T ss_pred ccccCCceEccCCCCCCcCCCCCEEEEEcccccCCCCcccchheEeEEEEeCHHHhCcccCC-CCccEEeecCCCCCeee
Confidence 63 34678888655443679999999986432 1223333332222110 0 0000 01122222 23578
Q ss_pred CCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHH
Q 019504 193 PGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLI 241 (340)
Q Consensus 193 ~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~ 241 (340)
.|+|||||+. +|.++||+++... ++. ...+....+...++|+++.+
T Consensus 175 ~GDSGgPL~~-~~~l~GI~S~g~~-C~~-~~p~vyt~V~~~~~WI~~~~ 220 (222)
T 1eq9_A 175 HGDSGGPLVA-NGAQIGIVSFGSP-CAL-GEPDVYTRVSSFVSWINANL 220 (222)
T ss_dssp TTCTTCEEEE-TTEEEEEEEECST-TTS-SSCEEEEEGGGGHHHHHHTS
T ss_pred eCCccceEEE-CCEEEEEEEECCC-cCC-CCCCEEEEHHHHHHHHHHHh
Confidence 9999999995 7899999998743 332 33566778888888887643
No 73
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*
Probab=99.33 E-value=4.4e-11 Score=104.89 Aligned_cols=177 Identities=15% Similarity=0.164 Sum_probs=103.1
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC-----ceeEEEEEEEEeCC--------CCcEEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG-----VQKNFEGKLVGADR--------AKDLAVLKI 124 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g-----~~~~~~a~v~~~d~--------~~DlAlL~v 124 (340)
..+|.+|+++ ||||+|||+....... ..+.|.+... ....+..+-+..++ ..|||||++
T Consensus 23 ~CgGtLI~~~-~VLTAAhC~~~~~~~~-------~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~L 94 (242)
T 3tvj_B 23 TAAGALLYDN-WVLTAAHAVYEQKHDA-------SALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKL 94 (242)
T ss_dssp EEEEEEETTT-EEEECHHHHSTTTTCS-------SCCEEEESCSBTTCSCCEEEEEEEEEECTTCCTTSCSTTCCEEEEE
T ss_pred cEEEEEecCC-EEEECHHHCCCCCCCc-------ceEEEEeccccccCcccceeeEEEEEeCCCCCCCCCCcCcEEEEEE
Confidence 4899999987 9999999996531110 0233333221 11223333333332 469999999
Q ss_pred ecCC---CCccceeecCCC---CCCCCCEEEEEecCCCC----CCceeEEEEeeeccc----cccCC----CceecceEE
Q 019504 125 EASE---DLLKPINVGQSS---FLKVGQQCLAIGNPFGF----DHTLTVGVISGLNRD----IFSQA----GVTIGGGIQ 186 (340)
Q Consensus 125 ~~~~---~~~~~~~l~~~~---~~~~G~~v~~iG~p~g~----~~~~~~G~vs~~~~~----~~~~~----~~~~~~~i~ 186 (340)
+.+- ..+.|+.|.... .+..|+.+.+.||.... ........+.-+... ..... .......+-
T Consensus 95 ~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~~C 174 (242)
T 3tvj_B 95 NNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLC 174 (242)
T ss_dssp SSCCCCBTTBCCCBCCCTTGGGGSCTTCEEEEEESCCCTTSSCCSBCEEEEEEBCCHHHHHHHHHSTTSCTTCCCTTEEE
T ss_pred CCccccCCCEecCCcCCCcccccccCCCEEEEEEeCCCCCCCcCccceEEeeeEEcHHHHHHhhccCCcccccccCCeEE
Confidence 8763 356788886543 25789999999986432 122333333322110 00000 000011222
Q ss_pred E-----eeccCCCCccceeecC---CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 187 T-----DAAINPGNSGGPLLDS---KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 187 ~-----d~~i~~G~SGGPl~d~---~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
. ....|.|+|||||+-. ++ .++||+++....++.....+....+...++|+++.++
T Consensus 175 a~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~ 240 (242)
T 3tvj_B 175 AGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENIIS 240 (242)
T ss_dssp ESCTTCCSBCCTTCTTCEEEEEETTTTEEEEEEEEEEEESSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred ECCCCCCCccccCCCCCeEEEEeCCCCcEEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 2 2457899999999852 33 4999999875444433445677888888898887654
No 74
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Probab=99.33 E-value=5.1e-11 Score=104.35 Aligned_cols=171 Identities=15% Similarity=0.178 Sum_probs=101.7
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC-------ceeEEEEEEEEeCC---------CCcEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG-------VQKNFEGKLVGADR---------AKDLAV 121 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g-------~~~~~~a~v~~~d~---------~~DlAl 121 (340)
..+|.+|+++ ||||+|||+.... .+.|.+... ....+..+-+..++ ..||||
T Consensus 29 ~CgGtLIs~~-~VLTAAHC~~~~~-----------~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DiAL 96 (236)
T 1elt_A 29 TCGGSLIRQG-WVMTAAHCVDSAR-----------TWRVVLGEHNLNTNEGKEQIMTVNSVFIHSGWNSDDVAGGYDIAL 96 (236)
T ss_dssp EEEEEEEETT-EEEECHHHHSSCC-----------CEEEEESCSBTTSCCSCCEEECEEEEEECTTCCTTCGGGCCCCEE
T ss_pred EEEEEEEeCC-EEEECHHhhCCcC-----------ceEEEEccccCCCCCCCcEEEEEEEEEECCCCCCCCCCCCccEEE
Confidence 4899999987 9999999997642 344444321 11233344344443 569999
Q ss_pred EEEecCC---CCccceeecCCC-CCCCCCEEEEEecCCCC-----CCceeEEEEeeeccc---cccCCCcee-cceEEE-
Q 019504 122 LKIEASE---DLLKPINVGQSS-FLKVGQQCLAIGNPFGF-----DHTLTVGVISGLNRD---IFSQAGVTI-GGGIQT- 187 (340)
Q Consensus 122 L~v~~~~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~-----~~~~~~G~vs~~~~~---~~~~~~~~~-~~~i~~- 187 (340)
|+++.+. ..+.|+.|.... .+..|+.+++.||.... ........+.-+... .....+... ..++-.
T Consensus 97 l~L~~~~~~~~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~ 176 (236)
T 1elt_A 97 LRLNTQASLNSAVQLAALPPSNQILPNNNPCYITGWGKTSTGGPLSDSLKQAWLPSVDHATCSSSGWWGSTVKTTMVCAG 176 (236)
T ss_dssp EEESSCCCCSSSCCCCCCCCTTCCCCTTCCEEEEESCCSSTTCCCCSBCEEEECCEECHHHHTSTTTTGGGSCTTEEEEC
T ss_pred EECCCCCccCCcEEeccCCCccccCCCCCEEEEEeCCCcCCCCCcChhheEeEeeecCHHHhccccccCCcCCcceEEec
Confidence 9998763 346777776443 35679999999986432 122233222222110 000000000 122222
Q ss_pred --eeccCCCCccceeecC-CC--cEEEEEeeeee-CCCCcCceEEEEehHhHHHHHHHH
Q 019504 188 --DAAINPGNSGGPLLDS-KG--NLIGINTAIIT-QTGTSAGVGFAIPSSTVLKIVPQL 240 (340)
Q Consensus 188 --d~~i~~G~SGGPl~d~-~G--~VVGi~~~~~~-~~~~~~~~~~aip~~~i~~~l~~l 240 (340)
....|.|+|||||+-. +| .++||+++... .++.....+....+...++|+++.
T Consensus 177 ~~~~~~C~GDSGgPL~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~ 235 (236)
T 1elt_A 177 GGANSGCNGDSGGPLNCQVNGSYYVHGVTSFVSSSGCNASKKPTVFTRVSAYISWMNGI 235 (236)
T ss_dssp CSSCBCCTTCTTCEEEEEETTEEEEEEEEEECCSSCTTCTTCCEEEEEGGGGHHHHHHH
T ss_pred CCCCccCCCCCCCeeEEEECCEEEEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHhh
Confidence 2456899999999854 56 79999998642 343233456677888888888753
No 75
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Probab=99.30 E-value=1.4e-10 Score=101.77 Aligned_cols=176 Identities=14% Similarity=0.124 Sum_probs=105.0
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC---------ceeEEEEEEEEeCC-CCcEEEEEEecC
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG---------VQKNFEGKLVGADR-AKDLAVLKIEAS 127 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g---------~~~~~~a~v~~~d~-~~DlAlL~v~~~ 127 (340)
..+|.+|+++ ||||+|||+..... ..+.|.+... ....+...-+.+++ ..|||||+++.+
T Consensus 24 ~CgGtLIs~~-~VLTAAHC~~~~~~---------~~~~v~~G~~~~~~~~~~~~~~~~~v~~~~~~p~~~DiALl~L~~~ 93 (240)
T 1si5_H 24 ICGGSLIKES-WVLTARQCFPSRDL---------KDYEAWLGIHDVHGRGDEKCKQVLNVSQLVYGPEGSDLVLMKLARP 93 (240)
T ss_dssp EEEEEEEETT-EEEEEGGGCSSSCG---------GGEEEEESCSBSSCSTTTTTCEEEEEEEEEECSSTTCEEEEEESSC
T ss_pred EEEEEEeeCC-EEEEhHHhcCCCCC---------ccEEEEEeeeecCCCCCCCcceEEEEEEEEcCCCCCcEEEEEECCc
Confidence 4899999987 99999999975421 0334443211 11223322233443 689999999876
Q ss_pred C---CCccceeecCC-CCCCCCCEEEEEecCCCC----CCceeEEEEeeecccccc-CCCc---eecceEEE-----eec
Q 019504 128 E---DLLKPINVGQS-SFLKVGQQCLAIGNPFGF----DHTLTVGVISGLNRDIFS-QAGV---TIGGGIQT-----DAA 190 (340)
Q Consensus 128 ~---~~~~~~~l~~~-~~~~~G~~v~~iG~p~g~----~~~~~~G~vs~~~~~~~~-~~~~---~~~~~i~~-----d~~ 190 (340)
. ..+.|+.|... ..+..|+.+++.||.... ........+.-+....-. .... .....+-. ...
T Consensus 94 v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~ 173 (240)
T 1si5_H 94 AVLDDFVSTIDLPNYGSTIPEKTSCSVYGWGYTGLINYDGLLRVAHLYIMGNEKCSQHHRGKVTLNESEICAGAEKIGSG 173 (240)
T ss_dssp CCCSSSCCCCBCCCTTCCCCTTCEEEEEESSCCCCSSCCCBCEEEEEEEECGGGTCC-------CCTTEEEEECSSSCCB
T ss_pred cccCCceeccCcCCcCCCCCCCCEEEEEEeCCCCCCCCCCeeEEEEEeecCHHHhhhhhcCCccCCCCEEeecCCCCCCE
Confidence 3 34677777643 245679999999986432 123333333322211100 0000 00122222 245
Q ss_pred cCCCCccceeecCCC---cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHcC
Q 019504 191 INPGNSGGPLLDSKG---NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQYG 244 (340)
Q Consensus 191 i~~G~SGGPl~d~~G---~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~~ 244 (340)
.|.|+|||||+-.++ .++||+++... ++.....+....+...++|+++.++..
T Consensus 174 ~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~i~~~ 229 (240)
T 1si5_H 174 PCEGDYGGPLVCEQHKMRMVLGVIVPGRG-CAIPNRPGIFVRVAYYAKWIHKIILTY 229 (240)
T ss_dssp CCTTCTTCEEEEECSSSEEEEEEECSCSC-SSCTTCCEEEEEGGGGHHHHHHHHSSC
T ss_pred eccCCCCCcEEEEECCcEEEEEEEEECCC-CCCCCCCcEEEEHHHHHHHHHHHHhcc
Confidence 788999999995432 79999998753 332234567788889999999887644
No 76
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2
Probab=99.30 E-value=2.4e-10 Score=100.16 Aligned_cols=172 Identities=16% Similarity=0.174 Sum_probs=101.0
Q ss_pred eEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEec-------CCceeEEEEEEEEeCC-------CCcEEEEEE
Q 019504 59 GSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILAS-------DGVQKNFEGKLVGADR-------AKDLAVLKI 124 (340)
Q Consensus 59 GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~-------~g~~~~~~a~v~~~d~-------~~DlAlL~v 124 (340)
.+|.+|+++ ||||+|||+........ ..+.|.+. ++....+..+-+..++ ..|||||++
T Consensus 30 CgGtLIs~~-~VLTAAHC~~~~~~~~~------~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L 102 (237)
T 2f91_A 30 CGASIYNEN-YAITAGHCVYGDDYENP------SGLQIVAGELDMSVNEGSEQIITVSKIILHENFDYNLLDNDISLLKL 102 (237)
T ss_dssp EEEEEEETT-EEEECGGGTTTSCTTSC------CSEEEEESCSBTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEE
T ss_pred EEEEEeeCC-EEEEcHHhCCCCccCCc------ccEEEEECCeeccCCCCccEEEEEEEEEECCCCCCCCCCCcEEEEEE
Confidence 799999987 99999999975421111 13444432 1211234444444443 469999999
Q ss_pred ecCC---CCccceeecCCCCCCCCCEEEEEecCCCC-----CCceeEEEEeeecc----ccccCCCceecceEEE-----
Q 019504 125 EASE---DLLKPINVGQSSFLKVGQQCLAIGNPFGF-----DHTLTVGVISGLNR----DIFSQAGVTIGGGIQT----- 187 (340)
Q Consensus 125 ~~~~---~~~~~~~l~~~~~~~~G~~v~~iG~p~g~-----~~~~~~G~vs~~~~----~~~~~~~~~~~~~i~~----- 187 (340)
+.+- ..+.|+.|.... ...++.+++.||.... ........+.-+.. ..... ......++-.
T Consensus 103 ~~~v~~~~~v~picLp~~~-~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~-~~~~~~~~Ca~~~~~ 180 (237)
T 2f91_A 103 SGSLTFNDNVAPIALPEQG-HTATGDVIVTGWGTTSEGGNTPDVLQKVTVPLVSDEDCRADYGA-DEILDSMICAGVPEG 180 (237)
T ss_dssp SSCCCCBTTBCCCBCCCTT-CCCCSEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHHHHHCT-TTSCTTEEEECCTTC
T ss_pred CCCcccCCceeeccCCCCC-CCCCCcEEEEECCcCCCCCCccceeeEEEEeEcCHHHhhhhhCC-CCcCCCeEEEecCCC
Confidence 9763 346788886443 4679999999986432 12233333332221 00100 0001122322
Q ss_pred eeccCCCCccceeecCCC---cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHH
Q 019504 188 DAAINPGNSGGPLLDSKG---NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQL 240 (340)
Q Consensus 188 d~~i~~G~SGGPl~d~~G---~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l 240 (340)
....|.|+|||||+-.++ .++||+++... ++.....+....+...++|+++.
T Consensus 181 ~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~ 235 (237)
T 2f91_A 181 GKDSCQGDSGGPLAASDTGSTYLAGIVSWGYG-CARPGYPGVYTEVSYHVDWIKAN 235 (237)
T ss_dssp CCBCCTTCTTCEEEECTTSSCEEEEEEEEESS-SSCTTCCEEEEEGGGSHHHHHHH
T ss_pred CCCCCCCcCCCCeEEecCCCEEEEEEEEecCC-CCCCCCCcEEEEHHHhHHHHHHh
Confidence 235789999999995432 79999998753 33223345667788888888763
No 77
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2
Probab=99.30 E-value=2.7e-10 Score=99.17 Aligned_cols=167 Identities=20% Similarity=0.195 Sum_probs=98.5
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC-------ceeEEEEEEEEeCC-------CCcEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG-------VQKNFEGKLVGADR-------AKDLAVLK 123 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g-------~~~~~~a~v~~~d~-------~~DlAlL~ 123 (340)
..+|.+|+++ ||||+|||+.. .+.|++... ....+..+-+..++ ..|||||+
T Consensus 28 ~CgGsLI~~~-~VLTAAHC~~~-------------~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~ 93 (227)
T 1euf_A 28 ICGGFLVRED-FVLTAAHCLGS-------------SINVTLGAHNIMERERTQQVIPVRRPIPHPDYNDETLANDIMLLK 93 (227)
T ss_dssp EEEEEEEETT-EEEECGGGCCE-------------EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEE
T ss_pred EEEEEEeeCC-EEEECHHHCCC-------------CcEEEEcccccCCCCCccEEEEEEEEEeCCCCCCCCCcCceEEEE
Confidence 4899999987 99999999964 233433211 11233333334443 35999999
Q ss_pred EecCC---CCccceeecCCC-CCCCCCEEEEEecCCCC-----CCceeEEEEeeecccc-ccCCCcee-cceEEEe----
Q 019504 124 IEASE---DLLKPINVGQSS-FLKVGQQCLAIGNPFGF-----DHTLTVGVISGLNRDI-FSQAGVTI-GGGIQTD---- 188 (340)
Q Consensus 124 v~~~~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~-----~~~~~~G~vs~~~~~~-~~~~~~~~-~~~i~~d---- 188 (340)
++.+. ..+.|+.|.... .+..|+.+++.||.... ........+.-+.... ........ ...+-..
T Consensus 94 L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~Ca~~~~~ 173 (227)
T 1euf_A 94 LTRKADITDKVSPINLPRSLAEVKPGMMCSVAGWGRLGVNMPSTDKLQEVDLEVQSEEKCIARFKNYIPFTQICAGDPSK 173 (227)
T ss_dssp ESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEESCBSSTTCCBCSBCEEEEEEBCCTHHHHTTCTTCCTTTEEEESCTTS
T ss_pred ECCcCcCCCceeccCCCCccccCCCCCEEEEEEEccCCCCCCCchhheEeEeccccHHHhhHhhcCcCCCcEEEccCCCC
Confidence 98763 346777786443 35689999999986422 1223333333222110 00000000 1122221
Q ss_pred -eccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 189 -AAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 189 -~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
...+.|+|||||+- +|.++||++++ ++.....+...-+...++|+++.++
T Consensus 174 ~~~~~~GDsGgPL~~-~~~l~Gi~S~g---c~~~~~p~vyt~V~~y~~WI~~~~~ 224 (227)
T 1euf_A 174 RKNSFSGDSGGPLVC-NGVAQGIVSYG---RNDGTTPDVYTRISSFLSWIHSTMR 224 (227)
T ss_dssp CCBCCTTCTTCEEEE-TTEEEEEEEEC---CTTCCSCEEEEEGGGTHHHHHHHTC
T ss_pred CCcccccCCCCceEE-CCEEEEEEEEe---CCCCCCCeEEEEHHHhHHHHHHHHh
Confidence 22347999999995 78999999986 2222234566778888888887653
No 78
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*
Probab=99.29 E-value=1.6e-10 Score=102.60 Aligned_cols=176 Identities=16% Similarity=0.178 Sum_probs=102.6
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC-------ceeEEEEEEEEeCCC-------CcEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG-------VQKNFEGKLVGADRA-------KDLAVLK 123 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g-------~~~~~~a~v~~~d~~-------~DlAlL~ 123 (340)
..+|.+|+++ ||||+|||+...... ..+.|.+... ....+..+-+..++. .|||||+
T Consensus 25 ~CgGtLI~~~-~VLTAAhC~~~~~~~--------~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~ 95 (261)
T 3gyl_B 25 VCGGSLVSEQ-WVLSAAHCFPSEHHK--------EAYEVKLGAHQLDSYSEDAKVSTLKDIIPHPSYLQEGSQGDIALLQ 95 (261)
T ss_dssp EEEEEECSSS-EEEECGGGSCTTSCG--------GGEEEEESCSBTTSCCSSCEEECEEEEEECTTCCSTTCSCCCEEEE
T ss_pred EEEEEEEcCC-EEEECHHHCCCCCCc--------ccEEEEeCceeccCCCCCceEEEEEEEEECCCcCCCCCCCcEEEEE
Confidence 4899999987 999999999643210 0233443211 111333344444543 4999999
Q ss_pred EecCC---CCccceeecCC-CCCCCCCEEEEEecCCCC-------CCceeEEEEeeecc----ccccC------CCceec
Q 019504 124 IEASE---DLLKPINVGQS-SFLKVGQQCLAIGNPFGF-------DHTLTVGVISGLNR----DIFSQ------AGVTIG 182 (340)
Q Consensus 124 v~~~~---~~~~~~~l~~~-~~~~~G~~v~~iG~p~g~-------~~~~~~G~vs~~~~----~~~~~------~~~~~~ 182 (340)
++.+. ..+.|+.|... ..+..|+.+++.||.... ........+.-+.. ..... ......
T Consensus 96 L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~ 175 (261)
T 3gyl_B 96 LSRPITFSRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSVSLLTPKPLQQLEVPLISRETCNSLYNIDAKPEEPHFVQE 175 (261)
T ss_dssp ESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCCCTTCBCEEEEEEEECHHHHHHHHTTTCCTTCCCCCCT
T ss_pred ECCCccCCCceeccCCCCcccCCCCCCEEEEEecCCCCCCCCccCCccceEEEEEEECHHHhhhhhcccccccccccccC
Confidence 98763 34677777543 345679999999986421 12233333322211 00000 000001
Q ss_pred ceEEE-----eeccCCCCccceeecC-CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHc
Q 019504 183 GGIQT-----DAAINPGNSGGPLLDS-KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQY 243 (340)
Q Consensus 183 ~~i~~-----d~~i~~G~SGGPl~d~-~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 243 (340)
.++-. ....|.|+|||||+-. +| .++||+++... ++.....+.+..+...++|+++.++.
T Consensus 176 ~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~lvGI~S~g~~-c~~~~~p~vyt~v~~~~~WI~~~i~~ 243 (261)
T 3gyl_B 176 DMVCAGYVEGGKDACQGDSGGPLSCPVEGLWYLTGIVSWGDA-CGARNRPGVYTLASSYASWIQSKVTE 243 (261)
T ss_dssp TEEEESCSSSSCBCCTTTTTCEEEEEETTEEEEEEEECCCCC-SSCTTCCEEEEEGGGGHHHHHHHHHH
T ss_pred CeEeeCCCCCCCccCCCCCCCeeEEEeCCEEEEEEEEecCCC-CCCCCCCCEEEEHHHhHHHHHHHHhh
Confidence 22222 2457899999999954 45 59999998743 33223456678888888888887653
No 79
>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*
Probab=99.29 E-value=8.9e-11 Score=103.81 Aligned_cols=172 Identities=19% Similarity=0.249 Sum_probs=101.6
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC-------CceeEEEEEEEEeCC-------CCcEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD-------GVQKNFEGKLVGADR-------AKDLAVLK 123 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~-------g~~~~~~a~v~~~d~-------~~DlAlL~ 123 (340)
..+|.+|+++ ||||+|||+.... .+.|++.. .....+..+-+..++ ..|||||+
T Consensus 26 ~CgGsLI~~~-~VLTAAHC~~~~~-----------~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~ 93 (250)
T 1aut_C 26 ACGAVLIHPS-WVLTAAHCMDESK-----------KLLVRLGEYDLRRWEKWELDLDIKEVFVHPNYSKSTTDNDIALLH 93 (250)
T ss_dssp EEEEEEEETT-EEEECGGGSSSCS-----------CCEEEESCCBTTCCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEE
T ss_pred EEEEEEeeCC-EEEEChHHcCCCC-----------ceEEEEcccccCCCCCccEEEEEEEEEECCCCCCCCCCCcEEEEE
Confidence 4899999987 9999999997643 23343321 111233444344443 36999999
Q ss_pred EecCC---CCccceeecCCC-----CCCCCCEEEEEecCCCCCC----------ceeEEEEeeecc----ccccCCCcee
Q 019504 124 IEASE---DLLKPINVGQSS-----FLKVGQQCLAIGNPFGFDH----------TLTVGVISGLNR----DIFSQAGVTI 181 (340)
Q Consensus 124 v~~~~---~~~~~~~l~~~~-----~~~~G~~v~~iG~p~g~~~----------~~~~G~vs~~~~----~~~~~~~~~~ 181 (340)
++.+. ..+.|+.|.... ....|+.+++.||...... ......+.-+.. ..... ...
T Consensus 94 L~~~v~~~~~v~picLp~~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~--~~~ 171 (250)
T 1aut_C 94 LAQPATLSQTIVPICLPDSGLAERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNECSEVMSN--MVS 171 (250)
T ss_dssp ESSCCCCBTTBCCCBCCCHHHHHHTTTSTTCEEEEEECCCCCSCCSCCCSSCSSBCEEEEEEEECHHHHHHHCSS--CCC
T ss_pred ECCcccCCCceeeeEcCCCccccccccCCCCEEEEEEeCCCCCCCccccccccceeeEEEEEEecHHHhhHHhcc--CCC
Confidence 98763 345677775321 1357999999998642210 122222222211 00000 000
Q ss_pred cceEEE-----eeccCCCCccceeecC-CCc--EEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHcC
Q 019504 182 GGGIQT-----DAAINPGNSGGPLLDS-KGN--LIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQYG 244 (340)
Q Consensus 182 ~~~i~~-----d~~i~~G~SGGPl~d~-~G~--VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~~ 244 (340)
..++-. ....|.|+|||||+-. +|+ ++||++++.. ++.....+....+...++|+++.++..
T Consensus 172 ~~~~Cag~~~~~~~~C~GDSGGPL~~~~~g~~~l~GI~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~~~~~ 241 (250)
T 1aut_C 172 ENMLCAGILGDRQDACEGDSGGPMVASFHGTWFLVGLVSWGEG-CGLLHNYGVYTKVSRYLDWIHGHIRDK 241 (250)
T ss_dssp TTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEECGGGTHHHHHHHHC--
T ss_pred CCEEEeCCCCCCCCCCCCCCchheEEEECCeEEEEEEEEECCC-CCCCCCCEEEEEHHHHHHHHHHHhhcc
Confidence 122222 2357899999999953 564 9999998753 332234566788888999998877543
No 80
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...
Probab=99.29 E-value=2e-10 Score=101.08 Aligned_cols=174 Identities=17% Similarity=0.180 Sum_probs=101.3
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC-------ceeEEEEEEEEeCCC---------CcEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG-------VQKNFEGKLVGADRA---------KDLAV 121 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g-------~~~~~~a~v~~~d~~---------~DlAl 121 (340)
..+|.+|+++ ||||+|||+.+.... ..+.|.+... ....+..+-+..++. .||||
T Consensus 30 ~CgGtLI~~~-~VLTAAHC~~~~~~~--------~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIAL 100 (247)
T 3mhw_U 30 VCGGSLISPC-WVISATHCFIDYPKK--------EDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIAL 100 (247)
T ss_dssp EEEEEEEETT-EEEECGGGTTTSCCG--------GGEEEEESCCBSSSCCTTCEEEEEEEEEECTTCEEC-CCEESCCEE
T ss_pred EEEEEEEeCC-EEEEcHHhCcCCCCC--------ccEEEEeccccccCCCCCCEEEEEEEEEECCCCCCCcCCCCCcEEE
Confidence 4899999987 999999999754210 0233333211 112333333444432 59999
Q ss_pred EEEecC-------CCCccceeecCC-CCCCCCCEEEEEecCCCC------CCceeEEEEeeecccccc---CCCcee-cc
Q 019504 122 LKIEAS-------EDLLKPINVGQS-SFLKVGQQCLAIGNPFGF------DHTLTVGVISGLNRDIFS---QAGVTI-GG 183 (340)
Q Consensus 122 L~v~~~-------~~~~~~~~l~~~-~~~~~G~~v~~iG~p~g~------~~~~~~G~vs~~~~~~~~---~~~~~~-~~ 183 (340)
|+++.+ ...+.|+.|... ..+..|+.+++.||.... ........+.-+....-. ...... ..
T Consensus 101 l~L~~~~~~~~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~ 180 (247)
T 3mhw_U 101 LKIRSKEGRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTK 180 (247)
T ss_dssp EEEECTTSCCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEEECHHHHTSTTTTGGGCCTT
T ss_pred EEeCCccccccccCCcccccccCCCcCCCCCCCEEEEEecCCcCCCCcccchhheeeEEEEEChHHhcCccccCCcCCCC
Confidence 999865 234667777543 355679999999986432 122333333322211000 000001 12
Q ss_pred eEEE-----eeccCCCCccceeecC-CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHH
Q 019504 184 GIQT-----DAAINPGNSGGPLLDS-KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLI 241 (340)
Q Consensus 184 ~i~~-----d~~i~~G~SGGPl~d~-~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~ 241 (340)
++-. ....|.|+|||||+-. +| .++||+++... +......+....+...++|+++.+
T Consensus 181 ~~Ca~~~~~~~~~C~GDSGgPl~~~~~~~~~l~Gi~S~g~~-c~~~~~p~vyt~V~~~~~WI~~~~ 245 (247)
T 3mhw_U 181 MLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRG-CALKDKPGVYTRVSHFLPWIRSHT 245 (247)
T ss_dssp EEEEECTTSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSBTTBCEEEEEGGGCHHHHHHHT
T ss_pred eEecCCCCCCCccCCCCCCCeEEEEECCCEEEEEEEEECCC-CCCCCCCeEEEEHHHHHHHHHHHh
Confidence 2222 2356899999999954 34 59999998743 332234566788888888888754
No 81
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Probab=99.29 E-value=2.1e-10 Score=99.48 Aligned_cols=172 Identities=13% Similarity=0.118 Sum_probs=101.3
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC-----CceeEEEEEEEEeCCC-------CcEEEEEEe
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD-----GVQKNFEGKLVGADRA-------KDLAVLKIE 125 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~-----g~~~~~~a~v~~~d~~-------~DlAlL~v~ 125 (340)
..+|.+|+++ ||||+|||+...... ..+.|.+.. .....+...-+..++. .|||||+++
T Consensus 21 ~CgGtLI~~~-~VLTAAHC~~~~~~~--------~~~~v~~G~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~ 91 (224)
T 3beu_A 21 GCGGALYAQD-IVLTAAHCVSGSGNN--------TSITATGGVVDLQSSSAVKVRSTKVLQAPGFTKETYGKDWALIKLA 91 (224)
T ss_dssp TEEEEEEETT-EEEECGGGSCSSEEB--------CCCEEEESCSBTTCTTCEEEEEEEEEECTTCCCGGGSCCCEEEEES
T ss_pred ceeEEEeeCC-EEEEChhhcCCCCCc--------ceEEEEeeEeecCCCCceEEEEEEEEeCCCcCCCcCCCCEEEEEeC
Confidence 3899999987 999999999764210 023333321 1112344444445544 499999999
Q ss_pred cCCCCccceeecCCCCCCCCCEEEEEecCCCCC-----CceeEEEEeeecc----ccccCCCceecceEEE-----eecc
Q 019504 126 ASEDLLKPINVGQSSFLKVGQQCLAIGNPFGFD-----HTLTVGVISGLNR----DIFSQAGVTIGGGIQT-----DAAI 191 (340)
Q Consensus 126 ~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~-----~~~~~G~vs~~~~----~~~~~~~~~~~~~i~~-----d~~i 191 (340)
.+.. ++++.+..... ..+..+++.||..... .......+.-+.. ..... .......+-. ....
T Consensus 92 ~~v~-~~~i~l~~~~~-~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~-~~~~~~~~Ca~~~~~~~~~ 168 (224)
T 3beu_A 92 QPIN-QPTLKIATTTA-YNQGTFTVAGWGANREGGSQQRYLLKANVPFVSDAACRSSSSF-ILVANEMICAGYDTKQEDT 168 (224)
T ss_dssp SCCC-SCCCEECCSST-TSSSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHHHCSS-CCCGGGEEEECCSSSSCBC
T ss_pred CCCC-CCccccccccc-cCCCEEEEEecCccCCCCcccceeeEeeCcccCHHHhhhhcCC-ccCCCCeEEeccCCCCCcC
Confidence 8753 56777764433 4567999999864321 2233333332221 10100 0000122222 2357
Q ss_pred CCCCccceeecCC--C--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 192 NPGNSGGPLLDSK--G--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 192 ~~G~SGGPl~d~~--G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
|.|+|||||+-.+ | .++||+++... ++.....+....+...++|+++.++
T Consensus 169 C~GDsGgPl~~~~~~~~~~l~Gi~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~~ 222 (224)
T 3beu_A 169 CQGDSGGPMFRKDNADEWVQVGIVSWGEG-CARKGKYGVYTEVSTFASAIASAAR 222 (224)
T ss_dssp CTTCTTCEEEEECTTSCEEEEEEEEEESS-SSCTTCCEEEEEHHHHHHHHHHHHT
T ss_pred CCCcCCCeeEEecCCCCEEEEEEeccCCC-CCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 8999999999543 3 68999998753 3322345677888888999887654
No 82
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Probab=99.28 E-value=5e-11 Score=104.75 Aligned_cols=172 Identities=14% Similarity=0.149 Sum_probs=100.6
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC------CceeEEEEEEEEeCCCC---------cEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD------GVQKNFEGKLVGADRAK---------DLAVL 122 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~------g~~~~~~a~v~~~d~~~---------DlAlL 122 (340)
..+|.+|+++ ||||+|||+..... ..+.|.+.. .....+..+-+..++.+ |||||
T Consensus 28 ~CgGtLIs~~-~VLTAAHC~~~~~~---------~~~~v~~G~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl 97 (241)
T 1m9u_A 28 SCGASLLSST-SALSASHCVDGVLP---------NNIRVIAGLWQQSDTSGTQTANVDSYTMHENYGAGTASYSNDIAIL 97 (241)
T ss_dssp EEEEEECSSS-EEEECHHHHTTCCG---------GGEEEEESCSBTTCCTTCEEEEEEEEEECTTTTCSSSTTTTCCEEE
T ss_pred eeEEEEEeCC-EEEecHHhCCCCCc---------ceEEEEEEeecCCCCCCceEEEEEEEEeCCCcCCCCCcccccEEEE
Confidence 4899999987 99999999976321 134444321 11124444445555443 99999
Q ss_pred EEecCC---CCccceeecCC-CCCCCCCEEEEEecCCCC-----CCceeEEEEeeecc----ccccC-CC-ceecceEEE
Q 019504 123 KIEASE---DLLKPINVGQS-SFLKVGQQCLAIGNPFGF-----DHTLTVGVISGLNR----DIFSQ-AG-VTIGGGIQT 187 (340)
Q Consensus 123 ~v~~~~---~~~~~~~l~~~-~~~~~G~~v~~iG~p~g~-----~~~~~~G~vs~~~~----~~~~~-~~-~~~~~~i~~ 187 (340)
+++.+- ..+.|+.|... .....|+.+++.||.... ........+.-+.. ..... .. ......+-.
T Consensus 98 ~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~Ca 177 (241)
T 1m9u_A 98 HLATSISLGGNIQAAVLPANNNNDYAGTTCVISGWGRTDGTNNLPDILQKSSIPVITTAQCTAAMVGVGGANIWDNHICV 177 (241)
T ss_dssp EESSCCCCCSSCCCCCCCSCSSCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHHHHTTSTTCCCCTTEEEE
T ss_pred EecCccccCCCccccCcCCCcCCCCCCCEEEEEeCcccCCCCCcccceeEeeEEEEcHHHhhhhhcccCCCcccCCcEEE
Confidence 998763 34677888654 222379999999986432 12333333332221 00000 00 001122322
Q ss_pred -----eeccCCCCccceeecCCC--cEEEEEee--ee-eCCCCcCceEEEEehHhHHHHHHH
Q 019504 188 -----DAAINPGNSGGPLLDSKG--NLIGINTA--II-TQTGTSAGVGFAIPSSTVLKIVPQ 239 (340)
Q Consensus 188 -----d~~i~~G~SGGPl~d~~G--~VVGi~~~--~~-~~~~~~~~~~~aip~~~i~~~l~~ 239 (340)
....|.|+|||||+-.+| .++||+++ .. ..+......+....+...++|+++
T Consensus 178 ~~~~~~~~~C~GDSGgPL~~~~~~~~l~Gi~S~~~~~g~~C~~~~~p~vyt~V~~~~~WI~~ 239 (241)
T 1m9u_A 178 QDPAGNTGACNGDSGGPLNCPDGGTRVVGVTSWVVSSGLGACLPDYPSVYTRVSAYLGWIGD 239 (241)
T ss_dssp CCTTSCCBCCTTCTTCEEEEESSSEEEEEEEEECCBCTTSCBCTTSCEEEEEGGGTHHHHHH
T ss_pred CcCCCCCeeecCcCCccEEEeCCCEEEEEEEEEeccCCCCccCCCCCEEEEEhHHhHhHHhh
Confidence 235789999999996435 89999998 32 123222345667778888888875
No 83
>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Probab=99.28 E-value=1.5e-10 Score=101.37 Aligned_cols=176 Identities=16% Similarity=0.132 Sum_probs=102.0
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC---------CceeEEEEEEEEeC-CCCcEEEEEEecC
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD---------GVQKNFEGKLVGAD-RAKDLAVLKIEAS 127 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~---------g~~~~~~a~v~~~d-~~~DlAlL~v~~~ 127 (340)
..+|.+|+++ ||||+|||+....... . .+.|.+.. .....+...-+..+ ...|||||+++.+
T Consensus 23 ~CgGtLI~~~-~VLTAAHC~~~~~~~~---~----~~~v~~G~~~~~~~~~~~~~~~~~v~~i~~hp~~~DiALl~L~~~ 94 (234)
T 2asu_B 23 FCGGSLVKEQ-WILTARQCFSSCHMPL---T----GYEVWLGTLFQNPQHGEPSLQRVPVAKMVCGPSGSQLVLLKLERS 94 (234)
T ss_dssp EEEEEEEETT-EEEEEGGGSSCTTCCC---T----TCEEEESCSBSSCCTTCTTCEEEEEEEEEECSTTCCEEEEEESSC
T ss_pred EEEEEEEeCC-EEEECHHHcCCCCCCc---c----cEEEEEeeeeccCCCCCCceEEEEEEEEecCCCCCCeEEEEeCCc
Confidence 4899999987 9999999996532100 0 22333221 11123333333344 3579999999876
Q ss_pred C---CCccceeecCCC-CCCCCCEEEEEecCCCC----CCceeEEEEeeecccc--ccCCCceecceEEE-----eeccC
Q 019504 128 E---DLLKPINVGQSS-FLKVGQQCLAIGNPFGF----DHTLTVGVISGLNRDI--FSQAGVTIGGGIQT-----DAAIN 192 (340)
Q Consensus 128 ~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~----~~~~~~G~vs~~~~~~--~~~~~~~~~~~i~~-----d~~i~ 192 (340)
. ..+.|+.|.... .+..|+.+++.||.... ........+.-+.... ...........+-. ....|
T Consensus 95 v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C 174 (234)
T 2asu_B 95 VTLNQRVALICLPPEWYVVPPGTKCEIAGWGETKGTGNDTVLNVALLNVISNQECNIKHRGRVRESEMCTEGLLAPVGAC 174 (234)
T ss_dssp CCCSSSSCCCBCCCTTCCCCTTCEEEEEESSCCTTSSCTTBCEEEEEEEECHHHHHHHTTTCCCTTEEEECCCSSCCBCC
T ss_pred CcCCCcEeccCCCCccccCCCCCEEEEEeCCccCCCCCCccceEEEeeEEcHHHcccccCCccCcceEeecCCCCCCeec
Confidence 3 346778886443 35679999999986432 2233333333222100 00000000122222 23578
Q ss_pred CCCccceeecC-CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 193 PGNSGGPLLDS-KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 193 ~G~SGGPl~d~-~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
.|+|||||+-. +| .++||+++... ++.....+....+...++|+++.++
T Consensus 175 ~GDSGgPL~~~~~~~~~l~Gi~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~~ 226 (234)
T 2asu_B 175 EGDYGGPLACFTHNSWVLEGIIIPNRV-CARSRWPAVFTRVSVFVDWIHKVMR 226 (234)
T ss_dssp TTCTTCEEEEEETTEEEEEEEECCCSS-SSCTTCCEEEEEGGGSHHHHHHHC-
T ss_pred cCCCCCceEEEECCeEEEEEEEEcCCC-CCCCCCCeEEEEHHHHHHHHHHHhh
Confidence 89999999954 23 79999998653 3322345667888888888887654
No 84
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}
Probab=99.27 E-value=1.3e-09 Score=95.06 Aligned_cols=174 Identities=11% Similarity=0.087 Sum_probs=101.1
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC---CceeEEEEEEEEeCC-------CCcEEEEEEecC
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD---GVQKNFEGKLVGADR-------AKDLAVLKIEAS 127 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~---g~~~~~~a~v~~~d~-------~~DlAlL~v~~~ 127 (340)
..+|.+|+++ ||||+|||+...... . .+.+.+.. ........+-+..++ ..|||||+++.+
T Consensus 25 ~CgGtLIs~~-~VLTAAhC~~~~~~~----~----~~~v~~G~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~ 95 (232)
T 2oq5_A 25 RCGATLINAT-WLVSAAHCFTTYKNP----A----RWTASFGVTIKPSKMKRGLRRIIVHEKYKHPSHDYDISLAELSSP 95 (232)
T ss_dssp EEEEEEEETT-EEEECGGGGSSCCCG----G----GEEEEESSBSTTCSEEEEEEEEEECTTCCTTCCTTCCEEEEESSC
T ss_pred eEEEEEEcCC-EEEECHHHcCCCCCC----c----eEEEEEeeEECCCceEEeEEEEEeCCCCCCCCCCCCEEEEEecCC
Confidence 4899999987 999999999764210 0 23333321 111233333334443 459999999876
Q ss_pred C---CCccceeecCCC-CCCCCCEEEEEecCCCC-----CCceeEEEEeeeccc---c-ccCCCceecceEEE-----ee
Q 019504 128 E---DLLKPINVGQSS-FLKVGQQCLAIGNPFGF-----DHTLTVGVISGLNRD---I-FSQAGVTIGGGIQT-----DA 189 (340)
Q Consensus 128 ~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~-----~~~~~~G~vs~~~~~---~-~~~~~~~~~~~i~~-----d~ 189 (340)
. ..+.|+.|.... .+..|+.+++.||.... ........+.-+... . ..........++-. ..
T Consensus 96 ~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~ 175 (232)
T 2oq5_A 96 VPYTNAVHRVCLPDASYEFQPGDVMFVTGFGALKNDGYSQNHLRQAQVTLIDATTCNEPQAYNDAITPRMLCAGSLEGKT 175 (232)
T ss_dssp CCCCSSSCCCBCCCTTCCCCTTCEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEEECTTCSS
T ss_pred CccCCceeEeECCCccccCCCCCEEEEEECCccCCCCCCCceeeEeEEEEeCHHHcCCccccCCccCCCEEeecCCCCCC
Confidence 3 346777776433 45679999999986422 123333333322211 0 00000001122322 13
Q ss_pred ccCCCCccceeecCC--C--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHH
Q 019504 190 AINPGNSGGPLLDSK--G--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLI 241 (340)
Q Consensus 190 ~i~~G~SGGPl~d~~--G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~ 241 (340)
..|.|+|||||+..+ | .++||+++... +......+...-+...++|+++..
T Consensus 176 ~~C~GDsGgPL~~~~~~~~~~l~GI~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~ 230 (232)
T 2oq5_A 176 DACQGDSGGPLVSSDARDIWYLAGIVSWGDE-CAKPNKPGVYTRVTALRDWITSKT 230 (232)
T ss_dssp BCCTTCTTCEEEEECTTSCEEEEEEEEECSS-SSBTTBCEEEEETGGGHHHHHHHH
T ss_pred ccCCCCCCCcEEEECCCCCEEEEEEEEeCCC-CCCCCCCeEEEEhHHhHHHHHHHh
Confidence 578999999999533 3 69999998643 332234566677888888887754
No 85
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=99.27 E-value=4.7e-10 Score=98.18 Aligned_cols=173 Identities=17% Similarity=0.164 Sum_probs=103.3
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC-------ceeEEEEEEEEeCC-------CCcEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG-------VQKNFEGKLVGADR-------AKDLAVLK 123 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g-------~~~~~~a~v~~~d~-------~~DlAlL~ 123 (340)
..+|.+|+++ ||||+|||+..... ..+.|.+... ....+..+-+..++ ..|||||+
T Consensus 27 ~CgGtLIs~~-~VLTAAHC~~~~~~---------~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~ 96 (238)
T 1ym0_A 27 FCGGSIINDR-WVVCAAHCMQGEAP---------ALVSLVVGEHDSSAASTVRQTHDVDSIFVNENYDPATLENDVSVIK 96 (238)
T ss_dssp EEEEEEEETT-EEEECHHHHTTCCG---------GGEEEEESCSBTTSCCSSCEEEEEEEEEECTTCCTTTCTTCCEEEE
T ss_pred EEEEEEeeCC-EEEECHHhCCCCCC---------ceEEEEEcccccCCCCCCceEEEEEEEEECCCCCCCCCcccEEEEE
Confidence 4899999987 99999999976421 1344443211 11233443344443 46999999
Q ss_pred EecCC---CCccceeecCCCCCCCCCEEEEEecCCCC------CCceeEEEEeeecc----ccccCCCceecceEEE---
Q 019504 124 IEASE---DLLKPINVGQSSFLKVGQQCLAIGNPFGF------DHTLTVGVISGLNR----DIFSQAGVTIGGGIQT--- 187 (340)
Q Consensus 124 v~~~~---~~~~~~~l~~~~~~~~G~~v~~iG~p~g~------~~~~~~G~vs~~~~----~~~~~~~~~~~~~i~~--- 187 (340)
++.+- ..+.|+.|........++.+++.||.... ........+.-+.. ...... .....++-.
T Consensus 97 L~~~~~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~-~~~~~~~Ca~~~ 175 (238)
T 1ym0_A 97 TAVAITFDINVGPICAPDPANDYVYRKSQCSGWGTINSGGVCCPAVLRYVTLNITTNAFCDAVYTSD-TIYDDMICATDN 175 (238)
T ss_dssp ESSCCCCSSSCCCCBCCCTTCCCTTCEEEEEESCCSSTTCCSCCSBCEEEEEEECCHHHHHHHCTTS-CCCTTEEEEECS
T ss_pred eCCCccccCcccccCCCCCcCCCCCCceEEEeecCCCCCCCcCCccceEEEEEeeCHHHHhHhhccc-ccCCCeEEecCC
Confidence 98763 34677888654332378999999986432 12233333332221 001000 001122222
Q ss_pred ----eeccCCCCccceeecC--CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHc
Q 019504 188 ----DAAINPGNSGGPLLDS--KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQY 243 (340)
Q Consensus 188 ----d~~i~~G~SGGPl~d~--~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 243 (340)
+...|.|+|||||+-. +| .++||+++... ++ ....+....+...++|+++.++.
T Consensus 176 ~~~~~~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~-C~-~~~p~vyt~v~~~~~WI~~~i~~ 237 (238)
T 1ym0_A 176 TGMTDRDSCQGDSGGPLSVKDGSGIFSLVGIVSWGIG-CA-SGYPGVYSRVGFHAGWITDTITN 237 (238)
T ss_dssp SCSSSCBCCTTTTTCEEEEECTTCCEEEEEEEEECSS-SS-SSSCEEEEEHHHHHHHHHHHHHC
T ss_pred CCCCcCccCCCccCCeeEEECCCCCEEEEEEEeECCC-CC-CCCCcEEEEHHHhHHHHHHHhcC
Confidence 1467899999999854 34 69999998753 33 23456678888899999887653
No 86
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B
Probab=99.26 E-value=2.3e-10 Score=100.78 Aligned_cols=180 Identities=17% Similarity=0.192 Sum_probs=104.4
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCC-------CCccEEEEEEEecCC-------ceeEEEEEEEEeCCC-------
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPA-------EGQVVARVNILASDG-------VQKNFEGKLVGADRA------- 116 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~-------~~~~~~~i~v~~~~g-------~~~~~~a~v~~~d~~------- 116 (340)
..+|.+|+++ ||||+|||+......... ... ..+.|.+... ....+..+-+..++.
T Consensus 26 ~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~~~~~~~~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~ 102 (251)
T 3gov_B 26 FCGGSLLGSS-WIVTAAHCLHQSLDPKDPTLRDSDLLSP--SDFKIILGKHWRLRSDENEQHLGVKHTTLHPQYDPNTFE 102 (251)
T ss_dssp EEEEEEETTT-EEEECGGGGBCCCCTTSCCCCGGGBCCG--GGEEEEESCCBSSSCCSSCEEECEEEEEECTTCBTTTTB
T ss_pred eEEEEEecCC-EEEECHhhcccccccccccccccccccc--ccEEEEecceeccCCCCcceEeeeEEEEECCCCCCCCCC
Confidence 4899999987 999999999763211000 000 1344443221 112344444455544
Q ss_pred CcEEEEEEecCC---CCccceeecCCCCCCCCCEEEEEecCCCC----CCceeEEEEeeecc----ccccCC-Cceecce
Q 019504 117 KDLAVLKIEASE---DLLKPINVGQSSFLKVGQQCLAIGNPFGF----DHTLTVGVISGLNR----DIFSQA-GVTIGGG 184 (340)
Q Consensus 117 ~DlAlL~v~~~~---~~~~~~~l~~~~~~~~G~~v~~iG~p~g~----~~~~~~G~vs~~~~----~~~~~~-~~~~~~~ 184 (340)
.|||||++..+. ..+.|+.|... ....|+.+++.||.... ........+.-+.. ...... ......+
T Consensus 103 ~DIAll~L~~~~~~~~~v~picLp~~-~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 181 (251)
T 3gov_B 103 NDVALVELLESPVLNAFVMPICLPEG-PQQEGAMVIVSGWGKQFLQRFPETLMEIEIPIVDHSTCQKAYAPLKKKVTRDM 181 (251)
T ss_dssp TCCEEEEESSCCCCSSSCCCCBCCSS-CCCTTCEEEEEECSCCTTSCCCSBCEEEEEEEECHHHHHHHTTTTTCCCCTTE
T ss_pred CCEEEEEeCCcccCCCceEEeECCCC-CCCCCCEEEEEcCCCCCCCCCCccceEEeeEEECHHHhhhhhhhccCCCCCCc
Confidence 599999998763 34668888644 44789999999986432 12233333332221 111100 0000122
Q ss_pred EEE-----eeccCCCCccceeecC---CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 185 IQT-----DAAINPGNSGGPLLDS---KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 185 i~~-----d~~i~~G~SGGPl~d~---~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
+-. ....|.|+|||||+-. +| .++||+++... ++.....+....+...++|+++.++
T Consensus 182 ~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~~l~Gi~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~~ 248 (251)
T 3gov_B 182 ICAGEKEGGKDACAGDSGGPMVTLNRERGQWYLVGTVSWGDD-CGKKDRYGVYSYIHHNKDWIQRVTG 248 (251)
T ss_dssp EEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSS-SSCSSCCEEEEETTTTHHHHHHHHC
T ss_pred EEecCCCCCCccCCCCCCCeEEeeeCCCCcEEEEEEEEECCC-CCCCCCCEEEEEHHHhHHHHHHHhc
Confidence 222 2457899999999853 34 69999998743 3333345677888888999988653
No 87
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2
Probab=99.26 E-value=2e-10 Score=101.52 Aligned_cols=172 Identities=17% Similarity=0.186 Sum_probs=100.7
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC--------ceeEEEEEEEEeCC-------CCcEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG--------VQKNFEGKLVGADR-------AKDLAVL 122 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g--------~~~~~~a~v~~~d~-------~~DlAlL 122 (340)
..+|.+|+++ ||||+|||+.... .+.|.+... ....+..+-+..++ ..|||||
T Consensus 42 ~CgGtLIs~~-~VLTAAHC~~~~~-----------~~~V~~G~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl 109 (251)
T 1pyt_D 42 TCGGTLITPN-HVLTAAHCISNTL-----------TYRVALGKNNLEVEDEAGSLYVGVDTIFVHEKWNSFLVRNDIALI 109 (251)
T ss_dssp EEEEEEEETT-EEEECGGGCCTTC-----------CEEEEESCSBTTCSCCSSCEEEEEEEEEECTTCBTTTTBSCCEEE
T ss_pred EEEeEEecCC-EEEECHHHhCCCc-----------eEEEEEcccccccCCCCCcEEEEEEEEEECCCCCCCCCCCCEEEE
Confidence 4899999987 9999999997533 344444221 11233334344443 3599999
Q ss_pred EEecCC---CCccceeecCCC-CCCCCCEEEEEecCCCCC-----CceeEEEEeeeccc---cccCCCcee-cceEEE--
Q 019504 123 KIEASE---DLLKPINVGQSS-FLKVGQQCLAIGNPFGFD-----HTLTVGVISGLNRD---IFSQAGVTI-GGGIQT-- 187 (340)
Q Consensus 123 ~v~~~~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~~-----~~~~~G~vs~~~~~---~~~~~~~~~-~~~i~~-- 187 (340)
+++.+- ..+.|+.|.... .+..|+.+++.||..... .......+.-+... ......... ..+|-.
T Consensus 110 ~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~ 189 (251)
T 1pyt_D 110 KLAETVELGDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTNGPIAAELQQGLQPVVDYATCSQRDWWGTTVKETMVCAGG 189 (251)
T ss_dssp EESSCCCCCSSCCCCBCCCTTCCCCTTCEEEECBCCCSSCCSCCCSBCBCCEEECBCHHHHTSTTTTTTTCCTTEEEECC
T ss_pred EECCCcccCCCeeeeEcCCCcccCCCCCEEEEEecccCCCCCCcccchheeEeEeeCHHHcchhhccCCCcCCCeEEecC
Confidence 998763 346777776443 346789999999864221 12222222222110 000000001 122222
Q ss_pred --eeccCCCCccceeecC-CC--cEEEEEeeeee-CCCCcCceEEEEehHhHHHHHHHHH
Q 019504 188 --DAAINPGNSGGPLLDS-KG--NLIGINTAIIT-QTGTSAGVGFAIPSSTVLKIVPQLI 241 (340)
Q Consensus 188 --d~~i~~G~SGGPl~d~-~G--~VVGi~~~~~~-~~~~~~~~~~aip~~~i~~~l~~l~ 241 (340)
....|.|+|||||+-. +| .++||+++... .++.....+...-+...++|+++.+
T Consensus 190 ~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~~ 249 (251)
T 1pyt_D 190 DGVISACNGDSGGPLNCQADGQWDVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDWINQKL 249 (251)
T ss_dssp SCSSCCCCSCTTCEEEEESSSSEEEEEEEEECCSSCTTBTTBCEEEEEGGGGHHHHHHHT
T ss_pred CCCCccCCCCCCCceEEEECCCEEEEEEEEECCCCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 1357899999999954 45 69999998752 3432234566778888888887754
No 88
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*
Probab=99.26 E-value=1.9e-10 Score=100.80 Aligned_cols=179 Identities=14% Similarity=0.104 Sum_probs=101.6
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC--------CceeEEEEEEEEeCC-------CCcEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD--------GVQKNFEGKLVGADR-------AKDLAVL 122 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~--------g~~~~~~a~v~~~d~-------~~DlAlL 122 (340)
..+|.+|+++ ||||+|||+........... ..+.+.+.. .....+..+-+..++ ..|||||
T Consensus 26 ~CgGtLI~~~-~VLTAAhC~~~~~~~~~~~~---~~~~v~~G~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl 101 (241)
T 3ncl_A 26 ICGASLISPN-WLVSAAHCYIDDRGFRYSDP---TQWTAFLGLHDQSQRSAPGVQERRLKRIISHPFFNDFTFDYDIALL 101 (241)
T ss_dssp EEEEEECSSS-EEEECGGGGCCBTTBCTTCG---GGEEEEESCSBTTCTTSTTCEEEEEEEEEECTTCCTTTCTTCCEEE
T ss_pred EEEEEEeeCC-EEEEcHHhcccCCCccccCC---ceEEEEEeccccccCCCCCceEEEEEEEEECCCCCCCCCCCcEEEE
Confidence 4899999987 99999999975421110000 023333321 111234444444454 4699999
Q ss_pred EEecCC---CCccceeecCCC-CCCCCCEEEEEecCCCC-----CCceeEEEEeeecccc--ccCCCceecceEEE----
Q 019504 123 KIEASE---DLLKPINVGQSS-FLKVGQQCLAIGNPFGF-----DHTLTVGVISGLNRDI--FSQAGVTIGGGIQT---- 187 (340)
Q Consensus 123 ~v~~~~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~-----~~~~~~G~vs~~~~~~--~~~~~~~~~~~i~~---- 187 (340)
+++.+. ..+.|+.|.... .+..|+.+++.||.... ........+.-+.... ..........++-.
T Consensus 102 ~L~~~~~~~~~v~piclp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~ 181 (241)
T 3ncl_A 102 ELEKPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYGGTGALILQKGEIRVINQTTCENLLPQQITPRMMCVGFLS 181 (241)
T ss_dssp EESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEECCHHHHHHHSTTTCCTTEEEEECTT
T ss_pred EECCCCcccCccCceEcCCcccCCCCCCEEEEEEecccCCCCCcCceeeEEeEEEECHHHhhhhcccCCCCCeEEeCCCC
Confidence 998763 346677775433 34579999999985321 1123333333222110 00000000112222
Q ss_pred -eeccCCCCccceeec--CCCc--EEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHH
Q 019504 188 -DAAINPGNSGGPLLD--SKGN--LIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLI 241 (340)
Q Consensus 188 -d~~i~~G~SGGPl~d--~~G~--VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~ 241 (340)
....|.|+|||||+- .+|+ ++||+++... +......+....+...++|+++..
T Consensus 182 ~~~~~C~GDsGgPl~~~~~~g~~~l~Gi~S~g~~-c~~~~~p~vyt~v~~y~~WI~~~~ 239 (241)
T 3ncl_A 182 GGVDSCQGDSGGPLSSVEADGRIFQAGVVSWGDG-CAQRNKPGVYTRLPLFRDWIKENT 239 (241)
T ss_dssp CSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSS-SSCTTCCEEEEESGGGHHHHHHHH
T ss_pred CCCccCCCcCCCCEEEEcCCCcEEEEEEEEECCC-CCCCCCCeEEEEHHHHHHHHHHHh
Confidence 235789999999982 3565 8999998754 322234566778888888887753
No 89
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Probab=99.26 E-value=3.7e-10 Score=99.53 Aligned_cols=176 Identities=18% Similarity=0.229 Sum_probs=104.0
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC-------ceeEEEEEEEEeC--------CCCcEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG-------VQKNFEGKLVGAD--------RAKDLAVL 122 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g-------~~~~~~a~v~~~d--------~~~DlAlL 122 (340)
..+|.+|+++ ||||+|||+...... ..+.|.+... ....+..+-+..+ ...|||||
T Consensus 24 ~CgGsLIs~~-~VLTAAHC~~~~~~~--------~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DiALl 94 (248)
T 2r0l_A 24 FCAGSLVHTC-WVVSAAHCFSHSPPR--------DSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLI 94 (248)
T ss_dssp EEEEEEEETT-EEEECGGGGTTCCCG--------GGEEEEESCCBTTCCCSSCEEECEEEEEECTTCCTTSTTTTCCEEE
T ss_pred eEEEEEEcCC-EEEECHHHcCCCCCc--------CcEEEEEEeEEcCCCCCccEEEeeeEEEeCCccCcCCCCCCCEEEE
Confidence 4899999987 999999999764210 0344444221 1123333333332 24699999
Q ss_pred EEecC-------CCCccceeecCC-CCCCCCCEEEEEecCCCC------CCceeEEEEeeecccccc---CCCcee-cce
Q 019504 123 KIEAS-------EDLLKPINVGQS-SFLKVGQQCLAIGNPFGF------DHTLTVGVISGLNRDIFS---QAGVTI-GGG 184 (340)
Q Consensus 123 ~v~~~-------~~~~~~~~l~~~-~~~~~G~~v~~iG~p~g~------~~~~~~G~vs~~~~~~~~---~~~~~~-~~~ 184 (340)
+++.+ ...+.|+.|... ..+..|+.+++.||.... ........+.-+....-. ...... ..+
T Consensus 95 ~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~ 174 (248)
T 2r0l_A 95 RLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNM 174 (248)
T ss_dssp EECCSSSCSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCSCCSBCEEEEEEBCCHHHHTSTTTTGGGCCTTE
T ss_pred EeCCcccccccCCCcEEEEECCCCCCCCCCCCEEEEEEccccCCCCCCCCchheEEEEeeeCHHHhCCccccCCcCCCCE
Confidence 99876 134677778643 345679999999986422 223334333332211000 011001 122
Q ss_pred EEE-----eeccCCCCccceeecC-CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHc
Q 019504 185 IQT-----DAAINPGNSGGPLLDS-KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQY 243 (340)
Q Consensus 185 i~~-----d~~i~~G~SGGPl~d~-~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 243 (340)
+-. ....|.|+|||||+-. +| .++||+++... ++.....+....+...++|+++.++.
T Consensus 175 ~Ca~~~~~~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~~~ 240 (248)
T 2r0l_A 175 LCAGYFDCKSDACQGDSGGPLACEKNGVAYLYGIISWGDG-CGRLHKPGVYTRVANYVDWINDRIRP 240 (248)
T ss_dssp EEESCSSSCCBCCTTCTTCEEEEEETTEEEEEEEEEECST-TTCTTCCEEEEEGGGGHHHHHHHHC-
T ss_pred EeECCCCCCCcCCCCccCCeEEEEECCcEEEEEEEEeCCC-CCCCCCCcEEEEHHHHHHHHHHHhcC
Confidence 322 2357899999999954 45 59999998753 33223456778888899999887654
No 90
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Probab=99.24 E-value=6.7e-10 Score=97.84 Aligned_cols=171 Identities=18% Similarity=0.208 Sum_probs=101.1
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC-----CceeEEEEEEEEeCC-------CCcEEEEEEe
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD-----GVQKNFEGKLVGADR-------AKDLAVLKIE 125 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~-----g~~~~~~a~v~~~d~-------~~DlAlL~v~ 125 (340)
..+|.+|+++ ||||+|||+.... ..+.+-..+ .....+...-+..++ ..|||||+++
T Consensus 41 ~CgGtLI~~~-~VLTAAHC~~~~~----------~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~ 109 (245)
T 1t8o_A 41 FCGGSLINEN-WVVTAAHCGVTTS----------DVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLS 109 (245)
T ss_dssp EEEEEEEETT-EEEECGGGCCCTT----------SEEEESCSBTTCSSSCCEEEEEEEEEECTTCCTTTCCSCCEEEEES
T ss_pred EEEEEEeeCC-EEEEcHHhCcCCC----------cEEEEeeeecCCCCCCcEEEEEEEEEeCCCCCCCCCCCCEEEEEEC
Confidence 4899999987 9999999987522 122221110 111233333334443 4699999998
Q ss_pred cCC---CCccceeecCCC-CCCCCCEEEEEecCCCC------CCceeEEEEeeeccc----cccCCCceecceEE---Ee
Q 019504 126 ASE---DLLKPINVGQSS-FLKVGQQCLAIGNPFGF------DHTLTVGVISGLNRD----IFSQAGVTIGGGIQ---TD 188 (340)
Q Consensus 126 ~~~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~------~~~~~~G~vs~~~~~----~~~~~~~~~~~~i~---~d 188 (340)
.+. ..+.|+.|.... .+..|+.+++.||.... ...+....+.-+... .... .....++- ..
T Consensus 110 ~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~--~~~~~~~Ca~~~~ 187 (245)
T 1t8o_A 110 TAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYTNANTPDRLQQASLPLLSNTNCKKYWGT--KIKDAMICAGASG 187 (245)
T ss_dssp SCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSCC--CCCCSBCEEEEEEEECHHHHHHHHGG--GCCTTEEEEECSS
T ss_pred CCCcCCCceeeeECCCCccCCCCCCEEEEEEeCCCCCCCCCCcchheEEEEeeEcchhhhHhhcC--cCCCceEEccCCC
Confidence 763 346777776433 45689999999986422 122333333222211 0000 00011222 12
Q ss_pred eccCCCCccceeecC-CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 189 AAINPGNSGGPLLDS-KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 189 ~~i~~G~SGGPl~d~-~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
...+.|+|||||+-. +| .++||+++.... ......+....+...++|+++.++
T Consensus 188 ~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~c-~~~~~p~vyt~V~~~~~WI~~~~~ 243 (245)
T 1t8o_A 188 VSSCMGDSGGPLVCKKNGAWTLVGIVSWGSST-CSTSTPGVYARVTALVNWVQQTLA 243 (245)
T ss_dssp CBCCTTCTTCEEEEEETTEEEEEEEEEECCTT-CCTTSEEEEEEGGGTHHHHHHHHH
T ss_pred CccCcccCcCCEEEEECCEEEEEEEEEeCCCC-CCCCCCEEEEEHHHHHHHHHHHHc
Confidence 357899999999954 34 799999987542 222345677888888999888665
No 91
>2jde_A Urokinase-type plasminogen activator; plasminogen activation, EGF-like domain, blood coagulation, inhibitor complex, UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Probab=99.24 E-value=6.4e-10 Score=99.61 Aligned_cols=175 Identities=17% Similarity=0.178 Sum_probs=101.3
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC-------ceeEEEEEEEEeCCC---------CcEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG-------VQKNFEGKLVGADRA---------KDLAV 121 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g-------~~~~~~a~v~~~d~~---------~DlAl 121 (340)
..+|.+|+++ ||||+|||+...... ..+.|.+... ....+..+-+..++. .||||
T Consensus 53 ~CgGtLI~~~-~VLTAAHC~~~~~~~--------~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIAL 123 (276)
T 2jde_A 53 VCGGSLMSPC-WVISATHCFIDYPKK--------EDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIAL 123 (276)
T ss_dssp EEEEEEEETT-EEEECGGGTTTSCCG--------GGEEEEESCCBSSSCCTTCEEEEEEEEEECTTCEECSSCEESCCEE
T ss_pred eeeeEEeeCC-EEEEcHHhccCCCCc--------ccEEEEecccccCCCCCCcEEEEEEEEEECCCCCCCCCcCCCcEEE
Confidence 4899999987 999999999753210 0233333211 112333333444432 59999
Q ss_pred EEEecC-------CCCccceeecCC-CCCCCCCEEEEEecCCCC------CCceeEEEEeeecccccc---CCCcee-cc
Q 019504 122 LKIEAS-------EDLLKPINVGQS-SFLKVGQQCLAIGNPFGF------DHTLTVGVISGLNRDIFS---QAGVTI-GG 183 (340)
Q Consensus 122 L~v~~~-------~~~~~~~~l~~~-~~~~~G~~v~~iG~p~g~------~~~~~~G~vs~~~~~~~~---~~~~~~-~~ 183 (340)
|+++.+ ...+.|+.|... ..+..|+.+++.||.... ........+.-+....-. ...... ..
T Consensus 124 l~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~ 203 (276)
T 2jde_A 124 LKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTK 203 (276)
T ss_dssp EEEECTTSCCCCCBTTBCCCBCCBTTBCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHTSTTTTGGGSCTT
T ss_pred EEeCCccccccccCCceEccCCCCcccCCCCCCEEEEEECCccCCCCcccchhhhhceecccChHHhCcccccCccCCCC
Confidence 999865 234677777543 355679999999986432 122333333322211000 000001 12
Q ss_pred eEEE-----eeccCCCCccceeecC-CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 184 GIQT-----DAAINPGNSGGPLLDS-KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 184 ~i~~-----d~~i~~G~SGGPl~d~-~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
++-. ....|.|+|||||+-. +| .++||+++... +......+....+...++|+++.++
T Consensus 204 ~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~~~ 269 (276)
T 2jde_A 204 MLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRG-CALKDKPGVYTRVSHFLPWIRSHTK 269 (276)
T ss_dssp EEEEECTTSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHTC-
T ss_pred eEEecCCCCCCcccccccCcceEEEeCCcEEEEEEEEECCC-CCCCCCCeEEEEHHHHHHHHHHHhh
Confidence 2222 2456899999999953 44 49999998743 3322345667888888899887543
No 92
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Probab=99.24 E-value=3e-10 Score=99.04 Aligned_cols=170 Identities=19% Similarity=0.174 Sum_probs=101.1
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCc----eeEEEEEEEEeCC-------CCcEEEEEEec
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGV----QKNFEGKLVGADR-------AKDLAVLKIEA 126 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~----~~~~~a~v~~~d~-------~~DlAlL~v~~ 126 (340)
..+|.+|+++ ||||+|||+.+.. .+.|.+.... ...+..+-+..++ ..|||||+++
T Consensus 29 ~CgGtLIs~~-~VLTAAHC~~~~~-----------~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~- 95 (230)
T 2hlc_A 29 WCGGSLIDNK-WILTAAHCVHDAV-----------SVVVYLGSAVQYEGEAVVNSERIISHSMFNPDTYLNDVALIKIP- 95 (230)
T ss_dssp EEEEEEEETT-EEEECHHHHTTEE-----------EEEEEESCSBTTCCSEEEECSEEEECTTCBTTTTBTCCEEEECS-
T ss_pred EEEEEEeeCC-EEEECHHHCCCCc-----------ceEEEEeeeecCCCCeEEEEEEEEECCCCCCCCccccEEEEEec-
Confidence 4899999987 9999999997632 4555553321 1223333333333 3699999998
Q ss_pred CC---CCccceeecCCC---CCCCCCEEEEEecCCCCC--CceeEEEEeeecc----ccccCCCceecceEEE----eec
Q 019504 127 SE---DLLKPINVGQSS---FLKVGQQCLAIGNPFGFD--HTLTVGVISGLNR----DIFSQAGVTIGGGIQT----DAA 190 (340)
Q Consensus 127 ~~---~~~~~~~l~~~~---~~~~G~~v~~iG~p~g~~--~~~~~G~vs~~~~----~~~~~~~~~~~~~i~~----d~~ 190 (340)
+. ..+.|+.|.... ....|+.+++.||..... .......+.-+.. ..... .......+-. ...
T Consensus 96 ~~~~~~~v~picLp~~~~~~~~~~~~~~~v~GwG~~~~~~~~l~~~~~~~~~~~~C~~~~~~-~~~~~~~~Ca~~~~~~~ 174 (230)
T 2hlc_A 96 HVEYTDNIQPIRLPSGEELNNKFENIWATVSGWGQSNTDTVILQYTYNLVIDNDRCAQEYPP-GIIVESTICGDTSDGKS 174 (230)
T ss_dssp CCCCCSSCCCCBCCCGGGGGCCCTTCEEEEEESSCCSSCCCBCEEEEEEEECHHHHHTTSCT-TSSCTTEEEECCTTSCB
T ss_pred CCCcCCcEeeeEcCCccccccccCCcEEEEEeeeecCCCCceeEEEEEEEeCHHHhhhhhCC-CcccCCeEEecCCCCCC
Confidence 42 346778786443 235789999999864322 2233333322221 11100 0001122222 235
Q ss_pred cCCCCccceeecC-CCcEEEEEeeeee-CCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 191 INPGNSGGPLLDS-KGNLIGINTAIIT-QTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 191 i~~G~SGGPl~d~-~G~VVGi~~~~~~-~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
.+.|+|||||+-. ++.++||+++... .+. .........+...++|+++.++
T Consensus 175 ~C~GDSGgPl~~~~~~~l~Gi~S~g~~~~C~-~~~p~vyt~V~~~~~WI~~~~~ 227 (230)
T 2hlc_A 175 PCFGDSGGPFVLSDKNLLIGVVSFVSGAGCE-SGKPVGFSRVTSYMDWIQQNTG 227 (230)
T ss_dssp CCTTCTTCEEEEGGGTEEEEEEEECCTTCTT-SCCCEEEEEGGGGHHHHHHHHC
T ss_pred cCCCCCCCeeEECcCCEEEEEEEEeCCCCCC-CCCCCEEEEhHHhHHHHHHhhC
Confidence 7899999999853 4589999998652 232 2334556788888899887653
No 93
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0
Probab=99.23 E-value=1.4e-10 Score=100.74 Aligned_cols=172 Identities=13% Similarity=0.166 Sum_probs=101.5
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC------ceeEEEEEEEEeC------CCCcEEEEEEe
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG------VQKNFEGKLVGAD------RAKDLAVLKIE 125 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g------~~~~~~a~v~~~d------~~~DlAlL~v~ 125 (340)
..+|.+|+++ ||||+|||+...... .+.+.+... ....+..+-+..+ ...|||||+++
T Consensus 27 ~CgGtLI~~~-~VLTAAHC~~~~~~~---------~~~v~~g~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~ 96 (228)
T 3h7o_A 27 TCGGAILSQW-FVLTAAHCVFDQKPE---------TIVIQYESTNLWEDPGKSDPYVSHVYLSFYRQETMENDIAILELS 96 (228)
T ss_dssp EEEEEESSSS-EEEECHHHHTTSCGG---------GCEEEESCSBTTTBCCEEECCEEEEEESSCBTTTTBTCCEEEEES
T ss_pred EeeeEEeeCC-EEEEcHHhcccCCCC---------cEEEEecccccccCCCceeeeEEEEEccccCCCCccCCEEEEEEC
Confidence 4899999987 999999999643210 223332211 1111222222222 34699999998
Q ss_pred cCCC----CccceeecCCC-CCCCCCEEEEEecCCCCC-----CceeEEEEeeecc----ccccCCCceecceEEE---e
Q 019504 126 ASED----LLKPINVGQSS-FLKVGQQCLAIGNPFGFD-----HTLTVGVISGLNR----DIFSQAGVTIGGGIQT---D 188 (340)
Q Consensus 126 ~~~~----~~~~~~l~~~~-~~~~G~~v~~iG~p~g~~-----~~~~~G~vs~~~~----~~~~~~~~~~~~~i~~---d 188 (340)
.+.. .+.|+.|.... .+..|+.+++.||..... .......+.-+.. ...... .....++-. +
T Consensus 97 ~~v~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~-~~~~~~~Ca~~~~ 175 (228)
T 3h7o_A 97 RPLKLDGLKSKPAKLPDIEFRPKTGSDVLVSGYGDGQTMDPKDHDLKSAQLTVVDLDECRTKYGPI-FLSLQVFCAQKVG 175 (228)
T ss_dssp SCCCCCSSSSCCCBCCCTTCCCCTTCEEEEEECCCSSCSCGGGGBCEEEEEEEECHHHHHHHHTTS-CCCSSEEEEECTT
T ss_pred CcccccccccccccCCccccCCCCCCeeEEEEEecCCCCCCcccccccceeEEEcHHHHHHHhcCc-cCCceEEecCCCC
Confidence 7632 46778886443 267899999999864322 1233333332221 111000 000112221 1
Q ss_pred eccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHc
Q 019504 189 AAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQY 243 (340)
Q Consensus 189 ~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 243 (340)
...+.|+|||||+. +++++||+++... +.. ...+....+...++|+++.++.
T Consensus 176 ~~~C~GDsGgPl~~-~~~l~Gi~S~g~~-c~~-~~p~vyt~v~~~~~WI~~~i~~ 227 (228)
T 3h7o_A 176 VSLESGDAGDPTVQ-QDTLVGVAAYFPK-RPE-GAPEVFTKVGSYVSWIQDIIKK 227 (228)
T ss_dssp CCCCGGGTTCEEEE-TTEEEEEECCCTT-CCT-TCCEEEEEGGGTHHHHHHHHTT
T ss_pred CcCCCCCCCCccee-cCeEEEEEeecCc-CCC-CCCcEEEEHHHHHHHHHHHhhc
Confidence 45678999999996 7889999998644 222 3456678888899999887653
No 94
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Probab=99.23 E-value=7.3e-11 Score=103.64 Aligned_cols=175 Identities=18% Similarity=0.206 Sum_probs=99.6
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCce-------eEEEEEEEEeCC-------C--CcEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQ-------KNFEGKLVGADR-------A--KDLAV 121 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~-------~~~~a~v~~~d~-------~--~DlAl 121 (340)
..+|.+|+++ ||||+|||+..... ..+.+-..+-.. ..+..+-+..++ . .||||
T Consensus 27 ~CgGtLIs~~-~VLTAAhC~~~~~~---------~~v~~G~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIAL 96 (240)
T 1fon_A 27 TCGGSLIAPD-WVVTAGHCISTSRT---------YQVVLGEYDRSVLEGSEQVIPINAGDLFVHPLWNSNCVACGNDIAL 96 (240)
T ss_dssp EECCEEEETT-EEEECGGGCCTTSC---------EEEEEEEEETTEEEEEEEEEEECTTSEEECTTCCTTCGGGCCCCEE
T ss_pred EEEEEEeeCC-EEEECHHHCCCCCc---------eEEEeeeeeccccCCCceeEeeeeeEEEECCCCcCCCccCCCCEEE
Confidence 4889999987 99999999976421 122222111110 011111122232 2 79999
Q ss_pred EEEecCC---CCccceeecCCC-CCCCCCEEEEEecCCCC-----CCceeEEEEeeeccc---cccCCCcee-cceEEE-
Q 019504 122 LKIEASE---DLLKPINVGQSS-FLKVGQQCLAIGNPFGF-----DHTLTVGVISGLNRD---IFSQAGVTI-GGGIQT- 187 (340)
Q Consensus 122 L~v~~~~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~-----~~~~~~G~vs~~~~~---~~~~~~~~~-~~~i~~- 187 (340)
|+++.+. ..+.|+.|.... .+..|+.+++.||.... ........+.-+... .....+... ..++-.
T Consensus 97 l~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~ 176 (240)
T 1fon_A 97 VKLSRSAQLGDKVQLANLPPAGDILPNEAPCYISGWGRLYTGGPLPDKLQQALLPTVDYEHCSQWDWWGITVKKTMVCAG 176 (240)
T ss_dssp EECSSCCCCTTSCCCCBCCCTTCCCCTTCCCEEEECTTCCCSSSCCSBCEEEECCEECHHHHTSTTTTGGGCCTTEEEEC
T ss_pred EEecCccccCCcccccCCCCcccCCCCCCeEEEEEEeEcCCCCCCChhheEEEEeeeCHHHhccceecCCccccceEeec
Confidence 9998763 346777886443 45679999999986432 122233222222110 000000001 112222
Q ss_pred --eeccCCCCccceeecC--CC--cEEEEEeeee-eCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 188 --DAAINPGNSGGPLLDS--KG--NLIGINTAII-TQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 188 --d~~i~~G~SGGPl~d~--~G--~VVGi~~~~~-~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
....|.|+|||||+-. +| .++||+++.. ..++.....+....+...++|+++.++
T Consensus 177 ~~~~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 238 (240)
T 1fon_A 177 GDTRSGCNGDSGGPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDWIDETIA 238 (240)
T ss_dssp CSSSCSTTSCTTCEEEEECSSSCEEEEEEEEECCTTCSSBTTBCEEEEEGGGSHHHHHHHHH
T ss_pred CCCCcccCCCCCCeEEeEcCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEhHHHHHHHHHHHh
Confidence 1356899999999843 56 8999999865 233322345667888888888887664
No 95
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*
Probab=99.23 E-value=5.3e-10 Score=98.16 Aligned_cols=175 Identities=17% Similarity=0.178 Sum_probs=102.0
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC-------CceeEEEEEEEEeCC-------CCcEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD-------GVQKNFEGKLVGADR-------AKDLAVLK 123 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~-------g~~~~~~a~v~~~d~-------~~DlAlL~ 123 (340)
..+|.+|+++ ||||+|||+....... .+.|.+.. .....+..+-+..++ ..|||||+
T Consensus 28 ~CgGtLI~~~-~VLTAAHC~~~~~~~~--------~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~ 98 (241)
T 2any_A 28 LCGGSLIGHQ-WVLTAAHCFDGLPLQD--------VWRIYSGILELSDITKDTPFSQIKEIIIHQNYKVSEGNHDIALIK 98 (241)
T ss_dssp EEEEEEEETT-EEEECGGGGSSCCCST--------TEEEECSCSBGGGCCTTSCCBCEEEEEECTTCCTTSSSSCCEEEE
T ss_pred EEEEEEecCC-EEEECHHHcCCCCCCc--------cEEEEeeeeeccccccCceEEeeEEEEECCCCCCCCCCCCeEEEE
Confidence 4899999987 9999999997642100 22333211 000122233333343 46999999
Q ss_pred EecCC---CCccceeecCCC-CCCCCCEEEEEecCCCCC-----CceeEEEEeeecc----ccccCCCceecceEEE---
Q 019504 124 IEASE---DLLKPINVGQSS-FLKVGQQCLAIGNPFGFD-----HTLTVGVISGLNR----DIFSQAGVTIGGGIQT--- 187 (340)
Q Consensus 124 v~~~~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~~-----~~~~~G~vs~~~~----~~~~~~~~~~~~~i~~--- 187 (340)
++.+- ..+.|+.|.... ....|+.+++.||..... .......+.-+.. ....... ....++-.
T Consensus 99 L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~-~~~~~~Ca~~~ 177 (241)
T 2any_A 99 LQAPLEYTEFQKPISLPSKGDTSTIYTNCWVTGWGFSKEKGEIQNILQKVNIPLVTNEECQKRYQDYK-ITQRMVCAGYK 177 (241)
T ss_dssp ESSCCCCBTTBCCCCCCCSSCCSTTCSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHTTSCTTC-SCTTEEEECCT
T ss_pred eCCcccCCCCcceeEcCCcccCCCCCCeEEEEecccCCCCCCcCchhheeEeEEeCHHHhhhHhccCC-CCcCcEeecCC
Confidence 98763 345677776433 356799999999864321 2233333322221 1110000 00122222
Q ss_pred --eeccCCCCccceeecC-CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHc
Q 019504 188 --DAAINPGNSGGPLLDS-KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQY 243 (340)
Q Consensus 188 --d~~i~~G~SGGPl~d~-~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 243 (340)
....|.|+|||||+-. +| .++||+++... +......+....+...++|+++.++.
T Consensus 178 ~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~-c~~~~~p~vyt~V~~~~~WI~~~~~~ 237 (241)
T 2any_A 178 EGGKDACKGDSGGPLVCKHNGMWRLVGITSWGEG-CARREQPGVYTKVAEYMDWILEKTQS 237 (241)
T ss_dssp TCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHHSC
T ss_pred CCCCccCCCCCCCcEEEEECCEEEEEEEEEecCC-CCCCCCCeEEEEHHHhHHHHHHHhhc
Confidence 2357899999999954 45 69999998753 32223456678888899999887653
No 96
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...
Probab=99.22 E-value=8.5e-11 Score=103.27 Aligned_cols=173 Identities=18% Similarity=0.179 Sum_probs=101.9
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC-------CceeEEEEEEEEeCC-------CCcEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD-------GVQKNFEGKLVGADR-------AKDLAVLK 123 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~-------g~~~~~~a~v~~~d~-------~~DlAlL~ 123 (340)
..+|.+|+++ ||||+|||+.... .+.|.+.. +....+..+.+..++ ..|||||+
T Consensus 26 ~CgGtLIs~~-~VLTAAhC~~~~~-----------~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~ 93 (241)
T 2jkh_A 26 FCGGTILSEF-YILTAAHCLYQAK-----------RFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLR 93 (241)
T ss_dssp EEEEEECSSS-EEEECGGGGGSCS-----------SCEEEESCSBTTCCCSCCEEECEEEEEECTTCBTTTTBTCCEEEE
T ss_pred EEEEEEeeCC-EEEEcHHHcCCCC-----------cEEEEECCccCCCCCCCcEEEEeEEEEeCCCCCCCCCCCcEEEEE
Confidence 4899999987 9999999997643 23333321 111234444444443 35999999
Q ss_pred EecCC---CCccceeecCCC----CCCCCCEEEEEecCCCC-----CCceeEEEEeeecccc--ccCCCceecceEEE--
Q 019504 124 IEASE---DLLKPINVGQSS----FLKVGQQCLAIGNPFGF-----DHTLTVGVISGLNRDI--FSQAGVTIGGGIQT-- 187 (340)
Q Consensus 124 v~~~~---~~~~~~~l~~~~----~~~~G~~v~~iG~p~g~-----~~~~~~G~vs~~~~~~--~~~~~~~~~~~i~~-- 187 (340)
++.+- ..+.|+.|.... .+..++.+++.||.... ........+.-+.... ..........++-.
T Consensus 94 L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~ 173 (241)
T 2jkh_A 94 LKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGEQSTRLKMLEVPYVDRNSCKLSSSFIITQNMFCAGY 173 (241)
T ss_dssp ESSCCCCBTTBCCCBCCCHHHHHHHTTTSSEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHHHHHCSSCCCTTEEEESC
T ss_pred ECCcccCCCCEeeeEcCCCCcccccccCCCeEEEEecCCCCCCCCcCccccEeeeccccHHHhcccccCcCCCCeEEeeC
Confidence 98763 246677775322 14568999999986322 1223333333222110 00000000122222
Q ss_pred ---eeccCCCCccceeecC-CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHc
Q 019504 188 ---DAAINPGNSGGPLLDS-KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQY 243 (340)
Q Consensus 188 ---d~~i~~G~SGGPl~d~-~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 243 (340)
....|.|+|||||+.. +| .++||+++... +......+....+...++|+++.++.
T Consensus 174 ~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~~~ 234 (241)
T 2jkh_A 174 DTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEG-CARKGKYGIYTKVTAFLKWIDRSMKT 234 (241)
T ss_dssp SSSSCBCCTTTTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHTC-
T ss_pred CCCCCccCcCcCCCeeEEEECCEEEEEEEEEECCC-CCCCCCceEEEEhHHHHHHHHHHhcc
Confidence 2357899999999954 45 59999998753 33223456778888899999887653
No 97
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Probab=99.21 E-value=1.2e-09 Score=96.36 Aligned_cols=174 Identities=14% Similarity=0.200 Sum_probs=101.3
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC-------CceeEEEEEEEEeCC-------CCcEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD-------GVQKNFEGKLVGADR-------AKDLAVLK 123 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~-------g~~~~~~a~v~~~d~-------~~DlAlL~ 123 (340)
..+|.+|+++ ||||+|||+...... ..+.|.+.. .....+..+-+..++ ..|||||+
T Consensus 31 ~CgGtLI~~~-~VLTAAHC~~~~~~~--------~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~ 101 (252)
T 1rtf_B 31 LCGGILISSC-WILSAAHCFQERFPP--------HHLTVILGRTYRVVPGEEEQKFEVEKYIVHKEFDDDTYDNDIALLQ 101 (252)
T ss_dssp EEEEEECSSS-EEEECGGGGTTCCCG--------GGEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEE
T ss_pred EEEEEEEeCC-EEEECHHHCCCCCCc--------ccEEEEeCcccccCCCCcceEEEEEEEEeCCCCCcCCCCCCEEEEE
Confidence 4899999987 999999999753210 023444321 111234433344443 36999999
Q ss_pred EecC----C---CCccceeecCCC-CCCCCCEEEEEecCCCC------CCceeEEEEeeecccccc----CCCceecceE
Q 019504 124 IEAS----E---DLLKPINVGQSS-FLKVGQQCLAIGNPFGF------DHTLTVGVISGLNRDIFS----QAGVTIGGGI 185 (340)
Q Consensus 124 v~~~----~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~------~~~~~~G~vs~~~~~~~~----~~~~~~~~~i 185 (340)
++.+ . ..+.|+.|.... .+..++.+++.||.... ........+.-+....-. ........++
T Consensus 102 L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 181 (252)
T 1rtf_B 102 LKSDSSRCAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALSPFYSERLKEAHVRLYPSSRCTSQHLLNRTVTDNML 181 (252)
T ss_dssp ECCSSSCCSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEECCGGGSSTTTTTTCCCCTTEE
T ss_pred ECCccccccccCCceeceeCCCccccCCCCCEEEEEEcCCCCCCCccccchheEeeeEEecHHHhhhhhccCCCCCCCEE
Confidence 9876 1 346777776433 35678999999986432 122333333322211100 0000011222
Q ss_pred EEe-----------eccCCCCccceeecC-CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHH
Q 019504 186 QTD-----------AAINPGNSGGPLLDS-KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLI 241 (340)
Q Consensus 186 ~~d-----------~~i~~G~SGGPl~d~-~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~ 241 (340)
-.. ...|.|+|||||+-. +| .++||+++... ++.....+...-+...++|+++.+
T Consensus 182 Ca~~~~~~~~~~~~~~~C~GDsGgPL~~~~~~~~~l~Gi~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~~ 250 (252)
T 1rtf_B 182 CAGDTRSGGPQANLHDACQGDSGGPLVCLNDGRMTLVGIISWGLG-CGQKDVPGVYTKVTNYLDWIRDNM 250 (252)
T ss_dssp EEECCC------CCCBCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHC
T ss_pred EecCCCCCCccCCCCccccCCCcCceEEEeCCcEEEEEEEEEcCC-CCCCCCCeEEEEHHHHHHHHHHhc
Confidence 221 457899999999854 45 69999998753 322233466778888888887654
No 98
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=99.21 E-value=1.2e-10 Score=107.92 Aligned_cols=181 Identities=10% Similarity=0.148 Sum_probs=104.6
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEEEEEEeCCC---CcEEEEEEecCC---CCc
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEGKLVGADRA---KDLAVLKIEASE---DLL 131 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a~v~~~d~~---~DlAlL~v~~~~---~~~ 131 (340)
...|.+|+++ ||||+|||+........................ +.+..+-+..++. .|||||+++.+- ..+
T Consensus 127 ~CGGsLIs~~-~VLTAAHCv~~~~~~~~~~~~~~~~~~~~~~~~--~~~~V~~i~~HP~y~~nDIALlkL~~~v~~~~~v 203 (347)
T 4f4o_C 127 TSGATLINEQ-WLLTTAKNLRLGHKNDTKAKDIAPTLRLYVGKK--QEVEIEKVIFHPDNSTVDIGLIKLKQKVPVNERV 203 (347)
T ss_dssp EEECCBCSSS-EEEECHHHHTTTSCTTCCHHHHGGGCEEEETTT--EEECEEEEEECSCTTTCCCEEEEESSCCCCSSSC
T ss_pred EEEEEEEcCC-EEEeCcccccCCCCCcceEEeeeeeeeecCCCe--EEEEEEEEEECcCCCCCCEEEEEECCCccCCCce
Confidence 4789999977 999999999754321110000000122222232 2444444445543 599999998763 457
Q ss_pred cceeecCCCCCCCCCEEEEEecCCCC----CCceeEEEEeeecc----ccccC--------------CCcee-cceEEE-
Q 019504 132 KPINVGQSSFLKVGQQCLAIGNPFGF----DHTLTVGVISGLNR----DIFSQ--------------AGVTI-GGGIQT- 187 (340)
Q Consensus 132 ~~~~l~~~~~~~~G~~v~~iG~p~g~----~~~~~~G~vs~~~~----~~~~~--------------~~~~~-~~~i~~- 187 (340)
.|+.|.....+..|...++.||.... ........+.-+.. ..... ....+ ..+|-.
T Consensus 204 ~PicLp~~~~~~~g~~~~v~GWG~~~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iCAG 283 (347)
T 4f4o_C 204 MPICLPSKDYVNVGLVGYVSGWGRNANLNFTEHLKYVMLPVADQEKCVQYYEGSTVPEKKTPKSPVGVQPILNEHTFCAG 283 (347)
T ss_dssp CCCBCCSSCCCCTTCEEEEEECSBCTTSSBCSSCEEEEEEEECHHHHHHHHSSCSSGGGCCCCCSSSSCCCCSTTEEEEC
T ss_pred eeeecCccccCCCCcEEEEeccccCCCCCCCccceEEEEEEeCHHHHHHHhccccccccccccccccccccccCCeEEec
Confidence 78888766667889999999976432 12233333322211 00000 00000 112221
Q ss_pred ----eeccCCCCccceeec---CCCc--EEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHc
Q 019504 188 ----DAAINPGNSGGPLLD---SKGN--LIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQY 243 (340)
Q Consensus 188 ----d~~i~~G~SGGPl~d---~~G~--VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 243 (340)
....+.|+|||||+- .+|+ ++||++++.. ++ ....+...-+...++|+++.++.
T Consensus 284 ~~~~~~d~C~GDSGGPLv~~~~~~~~~~lvGIvS~G~~-C~-~~~pgVYTrVs~y~~WI~~~i~~ 346 (347)
T 4f4o_C 284 LSKYQEDTCYGDAGSAFAVHDKDDDTWYAAGILSFDKS-CR-TAEYGVYVRVTSILDWIQTTIAD 346 (347)
T ss_dssp CCTTCCCCCTTCTTCEEEEEETTTTEEEEEEEEEECCC-TT-TSSCEEEEEHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEEEeCCC-CC-CCCCeEEEEHHHHHHHHHHHHHc
Confidence 224678999999972 2343 9999998754 33 23356677888899999887753
No 99
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B
Probab=99.21 E-value=1.7e-10 Score=100.87 Aligned_cols=173 Identities=14% Similarity=0.145 Sum_probs=99.3
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC--------CceeEEEEEEEEeCCC-------CcEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD--------GVQKNFEGKLVGADRA-------KDLAVL 122 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~--------g~~~~~~a~v~~~d~~-------~DlAlL 122 (340)
..+|.+|+++ ||||+|||+...... .. .+.+.+.. ........+-+..++. .|||||
T Consensus 25 ~CgGtLI~~~-~VLTAAHC~~~~~~~---~~----~~~v~~g~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl 96 (235)
T 4dgj_A 25 LCGASLVSSD-WLVSAAHCVYGRNLE---PS----KWTAILGLHMKSNLTSPQTVPRLIDEIVINPHYNRRRKDNDIAMM 96 (235)
T ss_dssp EEEEEECSSS-EEEECHHHHTTSCSS---GG----GEEEEESCCBTTCCSCTTCEEEEEEEEEECTTCBTTTTBTCCEEE
T ss_pred EEEEEEeeCC-EEEECHHhcCCCCCC---Cc----cEEEEEeeecccccCCCceeEEeEEEEEECCCCCCCCCCCeEEEE
Confidence 4899999987 999999999643210 00 23333221 1112233334444543 599999
Q ss_pred EEecCC---CCccceeecCCC-CCCCCCEEEEEecCCCC-----CCceeEEEEeeecc----ccccCCCceecceEEE--
Q 019504 123 KIEASE---DLLKPINVGQSS-FLKVGQQCLAIGNPFGF-----DHTLTVGVISGLNR----DIFSQAGVTIGGGIQT-- 187 (340)
Q Consensus 123 ~v~~~~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~-----~~~~~~G~vs~~~~----~~~~~~~~~~~~~i~~-- 187 (340)
+++.+. ..+.|+.|.... .+..|+.+++.||.... ........+.-+.. ....... ....++-.
T Consensus 97 ~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~-~~~~~~Ca~~ 175 (235)
T 4dgj_A 97 HLEFKVNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQGTTADILQEADVPLLSNERCQQQMPEYN-ITENMICAGY 175 (235)
T ss_dssp EESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSBSSTTCCBCSBCEEEEEEEECHHHHHHHCTTSC-CCTTEEEECC
T ss_pred EECCccccCCcccccCCCCcccCCCCCCEEEEEecccCCCCCccchhheEeEeeecCHHHhhhhccCcc-CCCCeEeecC
Confidence 998763 346778886443 35679999999985321 12223333322221 1000000 00122222
Q ss_pred ---eeccCCCCccceeecC-CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHH
Q 019504 188 ---DAAINPGNSGGPLLDS-KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQL 240 (340)
Q Consensus 188 ---d~~i~~G~SGGPl~d~-~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l 240 (340)
....|.|+|||||+-. +| .++||+++... +......+....+...++|+++.
T Consensus 176 ~~~~~~~C~GDsGgPl~~~~~~~~~l~Gi~S~g~~-c~~~~~p~vyt~V~~~~~WI~~~ 233 (235)
T 4dgj_A 176 EEGGIDSCQGDSGGPLMCQENNRWFLAGVTSFGYE-CALPNRPGVYARVSRFTEWIQSF 233 (235)
T ss_dssp TTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGTHHHHHTT
T ss_pred CCCCCccCCCCCCCeEEEEECCcEEEEEEEEEcCC-CCCCCCCEEEeeHHHHHHHHHHH
Confidence 2356899999999954 34 39999998754 32223356677788888888754
No 100
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A
Probab=99.21 E-value=8.4e-10 Score=97.30 Aligned_cols=176 Identities=14% Similarity=0.195 Sum_probs=101.8
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC-------CceeEEEEEEEEeC-CCCcEEEEEEecCC-
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD-------GVQKNFEGKLVGAD-RAKDLAVLKIEASE- 128 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~-------g~~~~~~a~v~~~d-~~~DlAlL~v~~~~- 128 (340)
..+|.+|+++ ||||+|||+...... . .+.|.+.. .....+...-+..+ ...|||||+++.+.
T Consensus 43 ~CgGsLIs~~-~VLTAAHC~~~~~~~----~----~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~~~DIALl~L~~~v~ 113 (247)
T 1ddj_A 43 FCGGTLISPE-WVLTAAHCLEKSPRP----S----SYKVILGAHQEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAV 113 (247)
T ss_dssp EEEEEEEETT-EEEECGGGGTTCSCG----G----GCEEEESCSBSSSCCTTCEEEEEEEEEECTTSCSCEEEEESSCCC
T ss_pred EEEEEEeeCC-EEEEcHHHcCCCCCC----c----cEEEEEcccccCccCCceEEEEeeeEEcCCCCCcEEEEEeCCcee
Confidence 4899999987 999999999764210 0 22333321 11123333333334 35799999998763
Q ss_pred --CCccceeecCCC-CCCCCCEEEEEecCCCCC----CceeEEEEeeecc---ccc-cCCCceecceEEE-----eeccC
Q 019504 129 --DLLKPINVGQSS-FLKVGQQCLAIGNPFGFD----HTLTVGVISGLNR---DIF-SQAGVTIGGGIQT-----DAAIN 192 (340)
Q Consensus 129 --~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~~----~~~~~G~vs~~~~---~~~-~~~~~~~~~~i~~-----d~~i~ 192 (340)
..+.|+.|.... .+..++.+++.||..... .......+.-+.. ... ..........+-. ....|
T Consensus 114 ~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C 193 (247)
T 1ddj_A 114 ITDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSC 193 (247)
T ss_dssp CCSSCCCCBCCCTTCCCCTTCEEEEEECCCCSSSTTTTBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCSSSCCCBC
T ss_pred eCCCEEeeecCCcccCCCCCCEEEEEEcccCCCCCCCccceEEeeeecCHHHhcchhccCCCCcCCeEeecCCCCCCccc
Confidence 346777776433 356789999999864321 2233333322221 110 0000001122222 23578
Q ss_pred CCCccceeecC-CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHc
Q 019504 193 PGNSGGPLLDS-KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQY 243 (340)
Q Consensus 193 ~G~SGGPl~d~-~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 243 (340)
.|+|||||+-. +| .++||+++... +......+...-+...++|+++.++.
T Consensus 194 ~GDSGgPL~~~~~~~~~l~GI~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~~~~ 246 (247)
T 1ddj_A 194 QGDAGGPLVCFEKDKYILQGVTSWGLG-CARPNKPGVYVRVSRFVTWIEGVMRN 246 (247)
T ss_dssp CSCTTCEEEEECSSSEEEEEEECGGGC-CBBTTBCEEEEEGGGSHHHHHHHHHT
T ss_pred cCcCcCcEEEEECCcEEEEEEEEECCC-CCCCCCCEEEEEhHHhHHHHHHHhhc
Confidence 99999999853 33 59999998753 22223346677888889999887653
No 101
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=99.21 E-value=4.7e-12 Score=98.11 Aligned_cols=81 Identities=21% Similarity=0.223 Sum_probs=61.9
Q ss_pred CceeeeeeeEEec--cHHHHhhcCC--------CCCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccC
Q 019504 244 GKVVRAGLNVDIA--PDLVASQLNV--------GNGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSF 313 (340)
Q Consensus 244 ~~~~~~~lg~~~~--~~~~~~~~~~--------~~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~ 313 (340)
|++.++|||+.+. ++.+++.+++ ..|++|.+|.++|||+++|| ++||+|++|||+++.+
T Consensus 1 G~v~r~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl-----------~~GD~I~~ing~~v~~ 69 (113)
T 2pzd_A 1 GSHMRRYIGVMMLTLSPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGL-----------RPGDVILAIGEQMVQN 69 (113)
T ss_dssp ----CEECCEEEEECCHHHHHHHHHHCSSCCCCSSCEEEEEEBTTSHHHHHTC-----------CTTCEEEEETTEECCS
T ss_pred CcccccEeEEEEEeCCHHHHHHhccccccccCCCCCeEEEEeCCCChHHHcCC-----------CCCCEEEEECCEECCC
Confidence 4577889998764 5667777664 47999999999999999999 9999999999999999
Q ss_pred CCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 314 SCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 314 ~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
..| +..++.. ....++++.|++
T Consensus 70 ~~~---~~~~l~~--~~~v~l~v~R~g 91 (113)
T 2pzd_A 70 AED---VYEAVRT--QSQLAVQIRRGR 91 (113)
T ss_dssp HHH---HHHHHHH--CSSEEEEEEETT
T ss_pred HHH---HHHHHhC--CCeEEEEEEECC
Confidence 887 5444443 245788888763
No 102
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A
Probab=99.20 E-value=5.8e-10 Score=100.39 Aligned_cols=176 Identities=18% Similarity=0.229 Sum_probs=103.6
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC-------ceeEEEEEEEEeC--------CCCcEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG-------VQKNFEGKLVGAD--------RAKDLAVL 122 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g-------~~~~~~a~v~~~d--------~~~DlAlL 122 (340)
..+|.+|+++ ||||+|||+...... ..+.|.+... ....+..+-+..+ ..+|||||
T Consensus 59 ~CgGsLIs~~-~VLTAAHC~~~~~~~--------~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl 129 (283)
T 1yc0_A 59 FCAGSLVHTC-WVVSAAHCFSHSPPR--------DSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLI 129 (283)
T ss_dssp EEEEEEEETT-EEEECGGGGTTCCCG--------GGEEEEESCCBTTCCCSSCEEECEEEEEECTTCCTTSTTTTCCEEE
T ss_pred EEEEEEeeCC-EEEECHHHcCCCCCC--------ceEEEEEeeeecccCCCceEEEeeEEEEecCccccCCCCCCceEEE
Confidence 5899999987 999999999764210 0344444221 1123333333333 24599999
Q ss_pred EEecC-------CCCccceeecCC-CCCCCCCEEEEEecCCCC------CCceeEEEEeeecccccc---CCCcee-cce
Q 019504 123 KIEAS-------EDLLKPINVGQS-SFLKVGQQCLAIGNPFGF------DHTLTVGVISGLNRDIFS---QAGVTI-GGG 184 (340)
Q Consensus 123 ~v~~~-------~~~~~~~~l~~~-~~~~~G~~v~~iG~p~g~------~~~~~~G~vs~~~~~~~~---~~~~~~-~~~ 184 (340)
+++.+ ...+.|+.|... ..+..|+.+++.||.... ........+.-+....-. ..+..+ ..+
T Consensus 130 ~L~~~~~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~~~~~~ 209 (283)
T 1yc0_A 130 RLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNM 209 (283)
T ss_dssp EECCBTTBSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCSCCSBCEEEEEEBCCHHHHTSTTTTGGGCCTTE
T ss_pred EeCCCccccccccCceeeeECCCCcCCCCCCCEEEEEEeCccCCCCCccCchheEeEEEEECHHHhcCccccCCcCCCCE
Confidence 99876 134677778643 345679999999986421 223344444333211000 011001 122
Q ss_pred EEE-----eeccCCCCccceeecC-CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHc
Q 019504 185 IQT-----DAAINPGNSGGPLLDS-KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQY 243 (340)
Q Consensus 185 i~~-----d~~i~~G~SGGPl~d~-~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 243 (340)
+-. ....|.|+|||||+-. +| .++||++++.. ++.....+....+...+.|+++.++.
T Consensus 210 iCa~~~~~~~~~C~GDSGgPL~~~~~g~~~l~GIvS~g~~-C~~~~~p~vyt~V~~y~~WI~~~i~~ 275 (283)
T 1yc0_A 210 LCAGYFDCKSDACQGDSGGPLACEKNGVAYLYGIISWGDG-CGRLHKPGVYTRVANYVDWINDRIRP 275 (283)
T ss_dssp EEESCSSSCCBCCTTCTTCEEEEEETTEEEEEEEEEECST-TTCTTCCEEEEEGGGGHHHHHHHCC-
T ss_pred EeeCCCCCCCccCCCCCCCceEEEECCcEEEEEEEEECCC-CCCCCCCeEEEEhhhHHHHHHHHhcC
Confidence 322 2357899999999954 45 59999998753 33223456678888889999886643
No 103
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...
Probab=99.19 E-value=4.4e-10 Score=99.50 Aligned_cols=177 Identities=17% Similarity=0.152 Sum_probs=103.2
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC-------CceeEEEEEEEEeCC-------CCcEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD-------GVQKNFEGKLVGADR-------AKDLAVLK 123 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~-------g~~~~~~a~v~~~d~-------~~DlAlL~ 123 (340)
..+|.+|+++ ||||+|||+...... ..+.|.+.. +....+...-+..++ ..|||||+
T Consensus 25 ~CgGtLIs~~-~VLTAAHC~~~~~~~--------~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~ 95 (254)
T 2bz6_H 25 LCGGTLINTI-WVVSAAHCFDKIKNW--------RNLIAVLGEHDLSEHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLR 95 (254)
T ss_dssp EEEEEECSSS-EEEECGGGGTTCSCG--------GGEEEEESCCBTTCCCSCCEEEEEEEEEEETTCCTTSCSSCCEEEE
T ss_pred EEEEEEecCC-EEEECHHHcCCCCCc--------ceEEEEECCcccCCCCCCcEEEEEEEEEECCCCCCCCCcCcEEEEE
Confidence 4899999987 999999999764310 023444321 111233333333333 36999999
Q ss_pred EecCC---CCccceeecCCC----CCCCCCEEEEEecCCCCC-----CceeEEEEeeeccc----cccCC--C-ceecce
Q 019504 124 IEASE---DLLKPINVGQSS----FLKVGQQCLAIGNPFGFD-----HTLTVGVISGLNRD----IFSQA--G-VTIGGG 184 (340)
Q Consensus 124 v~~~~---~~~~~~~l~~~~----~~~~G~~v~~iG~p~g~~-----~~~~~G~vs~~~~~----~~~~~--~-~~~~~~ 184 (340)
++.+. ..+.|+.|.... .+..++.+++.||..... .......+.-+... ..... . .....+
T Consensus 96 L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ 175 (254)
T 2bz6_H 96 LHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYM 175 (254)
T ss_dssp ESSCCCCBTTBCCCBCCCHHHHHHTGGGCCEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHHHHHSCCCTTCCCCCTTE
T ss_pred ECCccccCCCccceECCCCccccccccCCCcEEEEeCcccCCCCCCChhheeeeeeeecHHHHhhhhhccccCCccCCCE
Confidence 98763 346777775332 245689999999863211 22333333322210 00000 0 000122
Q ss_pred EEE-----eeccCCCCccceeecC-CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHcC
Q 019504 185 IQT-----DAAINPGNSGGPLLDS-KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQYG 244 (340)
Q Consensus 185 i~~-----d~~i~~G~SGGPl~d~-~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~~ 244 (340)
+-. ....|.|+|||||+.. +| .++||+++... +......+....+...++|+++.++..
T Consensus 176 ~Ca~~~~~~~~~C~GDSGgPl~~~~~g~~~l~GI~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~~~~ 242 (254)
T 2bz6_H 176 FCAGYSDGSKDSCKGDSGGPHATHYRGTWYLTGIVSWGQG-CATVGHFGVYTRVSQYIEWLQKLMRSE 242 (254)
T ss_dssp EEESCSSSSCBCCGGGTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHHTSC
T ss_pred EeecCCCCCCccccccCCCceEEeECCEEEEEEEEEECCC-CCCCCCCeEEEEHHHHHHHHHHHHhcc
Confidence 222 2357889999999954 45 59999998753 332234566788889999999887654
No 104
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2
Probab=99.19 E-value=2.5e-10 Score=100.28 Aligned_cols=177 Identities=18% Similarity=0.187 Sum_probs=100.4
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCce------eEEEEEEEEeCC----------CCcEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQ------KNFEGKLVGADR----------AKDLAV 121 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~------~~~~a~v~~~d~----------~~DlAl 121 (340)
..+|.+|+++ ||||+|||+.......... ..+.|.+..... ..+..+-+..++ ..||||
T Consensus 23 ~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~----~~~~v~~G~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIAL 97 (242)
T 2qy0_B 23 RGGGALLGDR-WILTAAHTLYPKEHEAQSN----ASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIAL 97 (242)
T ss_dssp EEEEEEETTT-EEEECHHHHSCSSCCC--------CCEEEESCSBHHHHHHHCCCCEEEEEECTTCCTTCSSCCTTCCEE
T ss_pred CEEEEEEeCC-EEEEcHHhccccccccCCC----ceEEEEEeeccccccccccceeEEEEEECCCCccCcCCCCCCcEEE
Confidence 4899999987 9999999997432111000 133444432110 012222333332 349999
Q ss_pred EEEecCC---CCccceeecCCCC-CCCCCEEEEEecCCCC---CCceeEEEEeeeccc----ccc-C--CCceecceEEE
Q 019504 122 LKIEASE---DLLKPINVGQSSF-LKVGQQCLAIGNPFGF---DHTLTVGVISGLNRD----IFS-Q--AGVTIGGGIQT 187 (340)
Q Consensus 122 L~v~~~~---~~~~~~~l~~~~~-~~~G~~v~~iG~p~g~---~~~~~~G~vs~~~~~----~~~-~--~~~~~~~~i~~ 187 (340)
|+++.+- ..+.|+.|..... +..|..+++.||.... ........+.-+... ... . .......++-.
T Consensus 98 l~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca 177 (242)
T 2qy0_B 98 LELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCA 177 (242)
T ss_dssp EEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCCCSSSCCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEE
T ss_pred EEECCCCcCCCCcceeecCCCccccCCCCeEEEEeeccCCCcCCccceEEEEEEeCHHHHHHHhccccccccCCCCEEec
Confidence 9998763 3467788864432 4679999999986432 122333333322210 000 0 00000122222
Q ss_pred -----eeccCCCCccceeecCCC-----cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 188 -----DAAINPGNSGGPLLDSKG-----NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 188 -----d~~i~~G~SGGPl~d~~G-----~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
....|.|+|||||+-.++ .++||++++.. ++. ..+....+...++|+++.++
T Consensus 178 ~~~~~~~~~C~GDSGgPl~~~~~~~~~~~l~Gi~S~g~~-C~~--~~~vyt~V~~y~~WI~~~~~ 239 (242)
T 2qy0_B 178 GHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIG-CSR--GYGFYTKVLNYVDWIKKEME 239 (242)
T ss_dssp SCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSS-SSS--SCEEEEEGGGGHHHHHHHTT
T ss_pred cCCCCCCccccCCCCCcEEEEECCCCeEEEEEEEEECCC-cCC--CCcEEEEHHHHHHHHHHHhh
Confidence 345789999999985322 49999998753 332 24677888889999988654
No 105
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...
Probab=99.19 E-value=2.9e-10 Score=99.66 Aligned_cols=174 Identities=18% Similarity=0.171 Sum_probs=100.4
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC-------CceeEEEEEEEEeCC-------CCcEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD-------GVQKNFEGKLVGADR-------AKDLAVLK 123 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~-------g~~~~~~a~v~~~d~-------~~DlAlL~ 123 (340)
..+|.+|+++ ||||+|||+...... ..+.|.+.. .....+..+-+..++ ..|||||+
T Consensus 28 ~CgGtLI~~~-~VLTAAHC~~~~~~~--------~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~ 98 (238)
T 3bg8_A 28 LCGGSIIGNQ-WILTAAHCFYGVESP--------KILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLK 98 (238)
T ss_dssp EEEEEEEETT-EEEECGGGGTTCCCG--------GGEEEECSCSBGGGCCTTSCCEEEEEEEECTTCCCGGGSCCCEEEE
T ss_pred EEEEEEeeCC-EEEECHHHCCCCCCC--------ceEEEEEeeccCCcCCCCceEEeeEEEEECCCCCCCCCCCcEEEEE
Confidence 4899999987 999999999764210 023343321 111233333344443 36999999
Q ss_pred EecCC---CCccceeecCCC-CCCCCCEEEEEecCCCC-----CCceeEEEEeeecc----ccccCCCceecceEEE---
Q 019504 124 IEASE---DLLKPINVGQSS-FLKVGQQCLAIGNPFGF-----DHTLTVGVISGLNR----DIFSQAGVTIGGGIQT--- 187 (340)
Q Consensus 124 v~~~~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~-----~~~~~~G~vs~~~~----~~~~~~~~~~~~~i~~--- 187 (340)
++.+- ..+.|+.|.... ....++.+++.||.... ........+.-+.. ...... .....++-.
T Consensus 99 L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~-~~~~~~~Ca~~~ 177 (238)
T 3bg8_A 99 LETTVNYTDSQRPISLPSKGERNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGH-KITHKMICAGYR 177 (238)
T ss_dssp ESSCCCCBTTBCCCBCCCGGGGSSCCCCEEEEESCCSSSSCCCCSBCEEEECCEECHHHHHHHCTTS-CCCTTEEEECCT
T ss_pred ECCccccCCCcccCCCCCCccCcCCCCeEEEEecCCCCCCCChhhhhcEeeEEEECHHHhhhhhcCC-CCCCCeEeecCC
Confidence 98763 346777775432 34678999999986432 12222222221111 000000 000122222
Q ss_pred --eeccCCCCccceeecC-CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 188 --DAAINPGNSGGPLLDS-KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 188 --d~~i~~G~SGGPl~d~-~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
....|.|+|||||+-. +| .++||+++... +......+...-+...++|+++.++
T Consensus 178 ~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~~~ 236 (238)
T 3bg8_A 178 EGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEG-CAQRERPGVYTNVVEYVDWILEKTQ 236 (238)
T ss_dssp TCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHHS
T ss_pred CCCCCcCCCCCCcceEEEECCeEEEEEEEEECCC-CCCCCCCcEEEeHHHHHHHHHHHHh
Confidence 2357899999999954 44 59999998753 3322345667788888888887653
No 106
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}
Probab=99.19 E-value=6.1e-10 Score=96.40 Aligned_cols=166 Identities=16% Similarity=0.079 Sum_probs=88.5
Q ss_pred ceEEEEEc---CCCEEEeCccccCCCCCCCCCCCccEEEEEEEec--CCce--eEEEEEEEEeC--------CCCcEEEE
Q 019504 58 NGSGVVWD---GKGHIVTNFHVIGSALSRKPAEGQVVARVNILAS--DGVQ--KNFEGKLVGAD--------RAKDLAVL 122 (340)
Q Consensus 58 ~GsGfiI~---~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~--~g~~--~~~~a~v~~~d--------~~~DlAlL 122 (340)
..+|.+|+ ++ ||||+|||+...... . ....+.+... +... ..+..+-+..+ ..+|||||
T Consensus 22 ~CgGslI~s~s~~-~VLTAAHC~~~~~~~-~----~~~~~~v~~G~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~DiAll 95 (218)
T 3cp7_A 22 VCSANIVASANQS-TVATAGHCLHDGNGG-Q----FARNFVFAPAYDYGESEHGVWAAEELVTSAEWANRGDFEHDYAFA 95 (218)
T ss_dssp EEEEEEBCCTTSC-EEEECGGGTBCCTTC-B----BCEEEEEEETCSSSCCTTCCEEEEEEEECHHHHHHCCGGGCCEEE
T ss_pred EEEEEEEecCCCC-EEEEChHhcCcCCCC-e----eecCEEEECcccCCCCCccEEEEEEEEECcccccCCCCcCCEEEE
Confidence 48999998 76 999999999653200 0 0013333332 1110 02222222222 34699999
Q ss_pred EEecC--CC---Ccc-ceeecCCCCCCCCCEEEEEecCCCCC---CceeEEEEeeeccccccCCCceecceEEEeeccCC
Q 019504 123 KIEAS--ED---LLK-PINVGQSSFLKVGQQCLAIGNPFGFD---HTLTVGVISGLNRDIFSQAGVTIGGGIQTDAAINP 193 (340)
Q Consensus 123 ~v~~~--~~---~~~-~~~l~~~~~~~~G~~v~~iG~p~g~~---~~~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~ 193 (340)
+++.+ .. .+. ++.|.. .. ..|+.+.+.||+.... ..... .... ........ ..+..-|..+.
T Consensus 96 ~L~~~~~~~~~~~v~~~~~l~~-~~-~~g~~~~v~GwG~~~~~~~~~l~~--C~~~--~~~~~~~~---~~~~~~Ca~~~ 166 (218)
T 3cp7_A 96 VLETKGGTTVQQQVGTASPIAF-NQ-PRGQYYSAYGYPAAAPFNGQELHS--CHGT--ATNDPMGS---STQGIPCNMTG 166 (218)
T ss_dssp EECCBTTBCHHHHHSCCBCBCC-SC-CSSCEEEEEECCCSTTCCSSSCEE--EEEE--CEECTTSS---SCEEEECCCCT
T ss_pred EEeCCCCcChhHhcCcccceee-cC-CCCCEEEEEeCCCCCCCCCceeeE--eeee--EEcCCCCC---ceEEecCCCCC
Confidence 99876 11 123 555643 22 4789999999986421 11111 0100 00000000 01222344567
Q ss_pred CCccceeecC---CCcEEEEEeeeeeCCCCcCceEEEEeh-HhHHHHHHHHH
Q 019504 194 GNSGGPLLDS---KGNLIGINTAIITQTGTSAGVGFAIPS-STVLKIVPQLI 241 (340)
Q Consensus 194 G~SGGPl~d~---~G~VVGi~~~~~~~~~~~~~~~~aip~-~~i~~~l~~l~ 241 (340)
|+|||||+.. .++++||+++.... .....++-.. +.++.++++..
T Consensus 167 GDSGGPlv~~~~g~~~lvGIvS~G~gc---~~~~~~~p~~~~~~~~l~~~a~ 215 (218)
T 3cp7_A 167 GSSGGPWFLGNGTGGAQNSTNSYGYTF---LPNVMFGPYFGSGAQQNYNYAS 215 (218)
T ss_dssp TCTTCEEEESSSSSSCEEEECCEEETT---EEEEEEECCCCHHHHHHHHHHT
T ss_pred CCcCCeeEEccCCCeEEEEEEccccCC---CCCcEEcCcCCHHHHHHHHHHH
Confidence 9999999954 37899999987532 1233443222 56777766643
No 107
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=99.18 E-value=9.5e-12 Score=96.24 Aligned_cols=81 Identities=23% Similarity=0.321 Sum_probs=63.9
Q ss_pred CceeeeeeeEEec--cHHHHhhcCC--------CCCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccC
Q 019504 244 GKVVRAGLNVDIA--PDLVASQLNV--------GNGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSF 313 (340)
Q Consensus 244 ~~~~~~~lg~~~~--~~~~~~~~~~--------~~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~ 313 (340)
|++.++|||+.+. ++.+++.+++ ..|++|.+|.++|||+++|| ++||+|++|||+++.+
T Consensus 1 G~v~~~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl-----------~~GD~I~~ing~~v~~ 69 (112)
T 2p3w_A 1 GSHMKRFIGIRMRTITPSLVDELKASNPDFPEVSSGIYVQEVAPNSPSQRGGI-----------QDGDIIVKVNGRPLVD 69 (112)
T ss_dssp CCCCEEECCEEEEECCHHHHHHHHHHCTTC--CCSSEEEEEECTTSHHHHHTC-----------CTTCEEEEETTEECCS
T ss_pred CCcccceeeEEEecCCHHHHHHhcccCcCcccCCCCeEEEEECCCChHHHCCC-----------CCCCEEEEECCEECCC
Confidence 4677888888764 4667777654 47999999999999999999 9999999999999999
Q ss_pred CCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 314 SCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 314 ~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
..| +..++. .....++++.|++
T Consensus 70 ~~~---~~~~l~--~g~~v~l~v~R~g 91 (112)
T 2p3w_A 70 SSE---LQEAVL--TESPLLLEVRRGN 91 (112)
T ss_dssp HHH---HHHHHH--HCSSEEEEEEETT
T ss_pred HHH---HHHHHh--CCCeEEEEEEECC
Confidence 987 544442 2344678888763
No 108
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*
Probab=99.18 E-value=2e-09 Score=97.28 Aligned_cols=175 Identities=16% Similarity=0.173 Sum_probs=100.2
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC------------ceeEEEEEEEEeCC-------CCc
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG------------VQKNFEGKLVGADR-------AKD 118 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g------------~~~~~~a~v~~~d~-------~~D 118 (340)
...|.+|+++ ||||+|||+...... ..+.|.+... ....+..+-+..++ ..|
T Consensus 31 ~CgGsLIs~~-~VLTAAHC~~~~~~~--------~~~~v~~G~~~~~~~~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~nD 101 (290)
T 1fiw_A 31 VCGGSLLNSQ-WLLTAAHCFRIKKKV--------TDWRLIFGAKEVEWGTNKPVKPPLQERYVEKIIIHEKYSASSEAND 101 (290)
T ss_dssp EEEEEEEETT-EEEECGGGGSSCCSG--------GGEEEEESCSBCCTTCCSCCCTTCEEEEEEEEEECTTCBTTTTBTC
T ss_pred EEEEEEeeCC-EEEECHHhCCCCCCC--------cceEEEecceEEeccCCCcCCCCceEEEEEEEEECCCCCCCCCCCC
Confidence 4889999987 999999999753210 0233333210 01223333333443 359
Q ss_pred EEEEEEecCC---CCccceeecCCC--CCCCCCEEEEEecCCCC------CCceeEEEEeeecccc---c-cCCCceecc
Q 019504 119 LAVLKIEASE---DLLKPINVGQSS--FLKVGQQCLAIGNPFGF------DHTLTVGVISGLNRDI---F-SQAGVTIGG 183 (340)
Q Consensus 119 lAlL~v~~~~---~~~~~~~l~~~~--~~~~G~~v~~iG~p~g~------~~~~~~G~vs~~~~~~---~-~~~~~~~~~ 183 (340)
||||+++.+. ..+.|+.|.... ....|+.+++.||.... ........+.-+.... . .........
T Consensus 102 IALl~L~~~v~~~~~v~PicLp~~~~~~~~~~~~~~v~GWG~~~~~~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~i~~~ 181 (290)
T 1fiw_A 102 IALMKITPPVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQENARRTSPMLQEARVDLIDLGLCNSTRWYNGRIRST 181 (290)
T ss_dssp CEEEEEESCCCCBTTBCCCBCCCTTCCSCCSSCEEEEEESCCSSTTCSSCCSBCEEEEEEEECHHHHTSTTTTTTCCCTT
T ss_pred EEEEEECCccccCCccccccCCCccccCcCCCCeEEEEEeccCCCCCCCCCceeeEEEEEEecHHHhccccccCCcCCCC
Confidence 9999998763 346777776432 23468999999986421 1223333333332110 0 000000112
Q ss_pred eEEE-----eeccCCCCccceeecCC---C--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 184 GIQT-----DAAINPGNSGGPLLDSK---G--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 184 ~i~~-----d~~i~~G~SGGPl~d~~---G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
.|-. ....|.|+|||||+-.+ | .++||++++.. ++.....+...-+...++|+++.+.
T Consensus 182 ~iCag~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~-C~~~~~p~vyt~V~~y~~WI~~~~~ 249 (290)
T 1fiw_A 182 NVCAGYPEGKIDTCQGDSGGPLMCKDSAENSYVVVGITSWGVG-CARAKRPGVYTSTWSYLNWIASKIG 249 (290)
T ss_dssp EEEEECTTCSSBCCTTCTTCEEEEECSSSSCEEEEEEEEECSS-SSBTTBCEEEEESGGGHHHHHHHHC
T ss_pred EEEEecCCCCCeeCCCCCchheEEEECCCCCEEEEEEEEECCC-CCCCCCCeEEEEHHHhHHHHHHHhC
Confidence 2322 13578999999999532 3 59999998753 3322334566778888888888664
No 109
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}
Probab=99.18 E-value=1.7e-09 Score=96.98 Aligned_cols=175 Identities=19% Similarity=0.222 Sum_probs=98.3
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC------------------ceeEEEEEEEEeCC----
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG------------------VQKNFEGKLVGADR---- 115 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g------------------~~~~~~a~v~~~d~---- 115 (340)
...|.+|+++ ||||+|||+....... ....+.|++..- ....+..+-+..++
T Consensus 52 ~CgGsLIs~~-~VLTAAHC~~~~~~~~-----~~~~~~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~ 125 (278)
T 2olg_A 52 ACGGSLINNR-YIVTAAHCVAGRVLRV-----VGALNKVRLGEWNTATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVD 125 (278)
T ss_dssp EEEEEECSSS-EEEECGGGTSTHHHHH-----TCEEEEEEESCSBTTCSSCEETTTTEECSSCCEEECEEEEEECTTCCT
T ss_pred eEEEEEEeCC-EEEEhHHhCCCccccc-----ccceeEEEeCcccCCCCccccccccccCCCCceEEeeEEEEECCCCcC
Confidence 4899999987 9999999997521000 001334443210 01123333233332
Q ss_pred -----CCcEEEEEEecCC---CCccceeecCCC-CCCCCCEEEEEecCCCC----CCceeEEEEeeeccc----cccCCC
Q 019504 116 -----AKDLAVLKIEASE---DLLKPINVGQSS-FLKVGQQCLAIGNPFGF----DHTLTVGVISGLNRD----IFSQAG 178 (340)
Q Consensus 116 -----~~DlAlL~v~~~~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~----~~~~~~G~vs~~~~~----~~~~~~ 178 (340)
..|||||+++.+. ..+.|+.|.... .+..|+.+++.||.... ........+.-+... ......
T Consensus 126 ~~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~ 205 (278)
T 2olg_A 126 GSKDRYHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRTETGQYSTIKQKLAVPVVHAEQCAKTFGAAG 205 (278)
T ss_dssp TCSSCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSSCCCCSBCEEEEEEBCCGGGGGGGGSSTT
T ss_pred CCCCCCCeEEEEEECCCCcCCCCcCccCcCCCCCCcCCCCEEEEEcCCcCCCCCccchhhcccccccCHHHHHHHhcccc
Confidence 4699999998763 346788886443 45789999999986432 122233333222211 111000
Q ss_pred cee-cceEEE----eeccCCCCccceeecC--CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHH
Q 019504 179 VTI-GGGIQT----DAAINPGNSGGPLLDS--KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQ 239 (340)
Q Consensus 179 ~~~-~~~i~~----d~~i~~G~SGGPl~d~--~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~ 239 (340)
..+ ..++-. ....|.|+|||||+-. +| .++||++++.. ++.....+...-+...+.|+++
T Consensus 206 ~~~~~~~~Ca~~~~~~~~C~GDSGGPL~~~~~~~~~~l~GIvS~g~~-C~~~~~p~vyt~V~~y~~WI~~ 274 (278)
T 2olg_A 206 VRVRSSQLCAGGEKAKDSCGGDSGGPLLAERANQQFFLEGLVSFGAT-CGTEGWPGIYTKVGKYRDWIEG 274 (278)
T ss_dssp CCCCTTEEEECCTTCTTCCCCCTTCEEEEEEGGGEEEEEEEEEECCB-CSTTCBCEEEEEGGGGHHHHHT
T ss_pred ccCCCceEeeecCCCCeeCCCccCcceEEEcCCCcEEEEEEEEECCC-CCCCCCCcEEeEHHHHHHHHHH
Confidence 001 122222 2356899999999953 33 59999998743 3322334566778888888765
No 110
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Probab=99.16 E-value=2e-10 Score=100.42 Aligned_cols=171 Identities=17% Similarity=0.217 Sum_probs=98.4
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC-------CceeEEEEEEEEeCC---------CCcEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD-------GVQKNFEGKLVGADR---------AKDLAV 121 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~-------g~~~~~~a~v~~~d~---------~~DlAl 121 (340)
..+|.+|+++ ||||+|||+.... .+.|.+.. .....+...-+..++ ..||||
T Consensus 25 ~CgGtLIs~~-~VLTAAhC~~~~~-----------~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIAL 92 (235)
T 2wph_S 25 FCGGSIVNEK-WIVTAAHCVETGV-----------KITVVAGEHNIEETEHTEQKRNVIRIIPHHNFNAAINTYNHDIAL 92 (235)
T ss_dssp CEEEEEEETT-EEEECGGGCCTTS-----------CCEEEESCCBTTSCCSCCEEEEEEEEEECTTTTSSSSCCTTCCEE
T ss_pred eEEEEEEeCC-EEEECHHHCcCCC-----------CEEEEEcccccCCCCCCcEEeeeEEEEeCCCCcccCCcCCCCEEE
Confidence 4899999987 9999999997543 23333321 111223333333332 359999
Q ss_pred EEEecCC---CCccceeecCCCC---CCCCCEEEEEecCCCC-----CCceeEEEEeeecccc-ccCCCcee-cceEEE-
Q 019504 122 LKIEASE---DLLKPINVGQSSF---LKVGQQCLAIGNPFGF-----DHTLTVGVISGLNRDI-FSQAGVTI-GGGIQT- 187 (340)
Q Consensus 122 L~v~~~~---~~~~~~~l~~~~~---~~~G~~v~~iG~p~g~-----~~~~~~G~vs~~~~~~-~~~~~~~~-~~~i~~- 187 (340)
|+++.+- ..+.|+.|..... +..+..+++.||.... ........+.-+.... .......+ ..++-.
T Consensus 93 l~L~~~~~~~~~v~picL~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~ 172 (235)
T 2wph_S 93 LELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRSTKFTITNNMFCAG 172 (235)
T ss_dssp EEESSCCCCBTTBCCCBCCCHHHHHHHHHTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHHHHHHTCSSCCCTTEEEES
T ss_pred EEECCcCcCCCCccccCCCCCcccccccCCccEEEEeCCCccCCCCccchheEeeeeeeCHHHhcCcccCCCCCCEEEeC
Confidence 9998763 3456777753221 2358899999975321 1122333332222110 00000000 122222
Q ss_pred ----eeccCCCCccceeecC-CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHH
Q 019504 188 ----DAAINPGNSGGPLLDS-KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLI 241 (340)
Q Consensus 188 ----d~~i~~G~SGGPl~d~-~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~ 241 (340)
....|.|+|||||+-. +| .++||+++... ++.....+....+...++|+++.+
T Consensus 173 ~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~ 232 (235)
T 2wph_S 173 FHEGGRDSCQGDSGGPHVTEVEGTSFLTGIISWGEE-CAMKGKYGIYTKVSRYVNWIKEKT 232 (235)
T ss_dssp CTTCSCBCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHC
T ss_pred CCCCCCccCCCCCCCceEEeECCeEEEEEEEEECCC-CCCCCCCeEEEEHHHhHHHHHHHH
Confidence 2357899999999953 45 59999998753 332334566788888889988754
No 111
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Probab=99.16 E-value=7.3e-10 Score=97.50 Aligned_cols=176 Identities=14% Similarity=0.165 Sum_probs=100.9
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC----ceeEEEEEEEEeCC-------CCcEEEEEEec
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG----VQKNFEGKLVGADR-------AKDLAVLKIEA 126 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g----~~~~~~a~v~~~d~-------~~DlAlL~v~~ 126 (340)
..+|.+|+++ ||||+|||+....... ..+.|.+... ....+..+-+..++ ..|||||+++.
T Consensus 28 ~CgGtLIs~~-~VLTAAHC~~~~~~~~-------~~~~v~~g~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~ 99 (245)
T 2f9n_A 28 FCGGSLIHPQ-WVLTAAHCVGPDVKDL-------ATLRVQLREQHLYYQDQLLPVSRIIVHPQFYIIQTGADIALLELEE 99 (245)
T ss_dssp EEEEEEEETT-EEEECGGGGCSSCCCG-------GGEEEECSCSBTTTTCCCBCEEEEEECTTCCSSCCTTCCEEEEESS
T ss_pred EEEEEEeeCC-EEEECHHhCCCCCCCc-------ceEEEEeCCcccccCceEEEEEEEEECCCccCCCCCCcEEEEEeCC
Confidence 4899999987 9999999996422100 1344443221 11123333333443 35999999987
Q ss_pred CC---CCccceeecCCC-CCCCCCEEEEEecCCCCC-------CceeEEEEeeecc----ccccCC-------Cceecce
Q 019504 127 SE---DLLKPINVGQSS-FLKVGQQCLAIGNPFGFD-------HTLTVGVISGLNR----DIFSQA-------GVTIGGG 184 (340)
Q Consensus 127 ~~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~~-------~~~~~G~vs~~~~----~~~~~~-------~~~~~~~ 184 (340)
+- ..+.|+.|.... .+..|+.+++.||..... .......+.-+.. ...... ......+
T Consensus 100 ~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~ 179 (245)
T 2f9n_A 100 PVNISSRVHTVMLPPASETFPPGMPCWVTGWGDVDNDEPLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIRDDM 179 (245)
T ss_dssp CCCCCSSSCCCBCCCTTCCCCTTCCEEEEESCCSBTTBCCCTTCBCEEEECCEECHHHHHHHHHTTCCSCTTSCCSCTTE
T ss_pred CCcCCCCccccCCCCcccCCCCCCEEEEEEeCCCCCCCCCCccccceEEEEEEcCHHHhhhhhccccccccccccccccc
Confidence 63 346777776432 456799999999864211 1222222221111 000000 0000112
Q ss_pred EEE---eeccCCCCccceeecC-CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 185 IQT---DAAINPGNSGGPLLDS-KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 185 i~~---d~~i~~G~SGGPl~d~-~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
+-. ....|.|+|||||+-. +| .++||+++... ++.....+...-+...++|+++.++
T Consensus 180 ~Ca~~~~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~~~ 242 (245)
T 2f9n_A 180 LCAGNSQRDSCQGDSGGPLVCKVNGTWLQAGVVSWGEG-CAQPNRPGIYTRVTYYLDWIHHYVP 242 (245)
T ss_dssp EEECCSSSBCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSBTTBCEEEEEGGGGHHHHHHHSC
T ss_pred EeecCCCCCcCCCCCCCceEEEECCEEEEEEEEEeCCC-CCCCCCCeEEEEHHHHHHHHHHHhh
Confidence 221 2356899999999954 56 59999998753 3322345667888888999887654
No 112
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Probab=99.15 E-value=1.2e-09 Score=96.76 Aligned_cols=180 Identities=15% Similarity=0.149 Sum_probs=98.3
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC--------ceeEEEEEEEEeCC--------CCcEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG--------VQKNFEGKLVGADR--------AKDLAV 121 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g--------~~~~~~a~v~~~d~--------~~DlAl 121 (340)
..+|.+|+++ ||||+|||+........... ..+.|.+... .......+-+..++ ..||||
T Consensus 27 ~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~~---~~~~v~~G~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIAL 102 (259)
T 3rm2_H 27 LCGASLISDR-WVLTAAHCLLYPPWDKNFTE---NDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIAL 102 (259)
T ss_dssp EEEEEECSSS-EEEECGGGTEEGGGTEECCG---GGEEEEESCCBSSSCCTTTCEEEEEEEEEECTTCBTTTTCBTCCEE
T ss_pred EEEEEEEeCC-EEEEcHHhCcccccccccCc---ccEEEEECcccccccccCcceeeEEEEEEECCCCCCCCCCCCcEEE
Confidence 4899999987 99999999953210000000 0233443211 11112122233332 349999
Q ss_pred EEEecCC---CCccceeecCCCC----CCCCCEEEEEecCCCC-----------CCceeEEEEeeecccc-ccCCCcee-
Q 019504 122 LKIEASE---DLLKPINVGQSSF----LKVGQQCLAIGNPFGF-----------DHTLTVGVISGLNRDI-FSQAGVTI- 181 (340)
Q Consensus 122 L~v~~~~---~~~~~~~l~~~~~----~~~G~~v~~iG~p~g~-----------~~~~~~G~vs~~~~~~-~~~~~~~~- 181 (340)
|+++.+- ..+.|+.|..... +..|..+.+.||.... ........+.-+.... .......+
T Consensus 103 l~L~~~v~~~~~v~picLp~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~ 182 (259)
T 3rm2_H 103 MKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRIT 182 (259)
T ss_dssp EEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESCCSSCC-------CCCSBCEEEEEEBCCHHHHHHTCSSCCC
T ss_pred EEeCCceEcCCCcccccCCCccccccccCCCCEEEEeecCCCcCcCCccccccccccceEEEEEEeCHHHhhhhhcccCC
Confidence 9998763 3466777753321 3569999999986422 1122222232221100 00000001
Q ss_pred cceEEEe--------eccCCCCccceeecC---CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 182 GGGIQTD--------AAINPGNSGGPLLDS---KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 182 ~~~i~~d--------~~i~~G~SGGPl~d~---~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
..++-.. ...|.|+|||||+-. +| .++||+++... ++.....+...-+...++|+++.++
T Consensus 183 ~~~~Cag~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~GI~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~i~ 255 (259)
T 3rm2_H 183 DNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEG-CDRDGKYGFYTHVFRLKKWIQKVID 255 (259)
T ss_dssp TTEEEECCCGGGSCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSS-SSCTTCCEEEEETGGGHHHHHHHHH
T ss_pred CceEeeeccCCCCCCCcccCCCCCCeeEEEECCCCCEEEEEEEEECCC-CCCCCCCeEEEEHHHhHHHHHHHHH
Confidence 1222221 267899999999843 23 69999998743 3322345667788888888887664
No 113
>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}
Probab=99.12 E-value=7.9e-09 Score=92.37 Aligned_cols=176 Identities=16% Similarity=0.158 Sum_probs=98.6
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC-------CceeEEEEEEEEeCC---------CCcEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD-------GVQKNFEGKLVGADR---------AKDLAV 121 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~-------g~~~~~~a~v~~~d~---------~~DlAl 121 (340)
...|.+|+++ ||||+|||+.+..... .+.+.+.. .....+..+-+..++ ..||||
T Consensus 53 ~CgGsLIs~~-~VLTAAHCv~~~~~~~--------~~~v~~g~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~Dial 123 (276)
T 2vnt_A 53 VCGGSLMSPC-WVISATHCFIDYPKKE--------DYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIAL 123 (276)
T ss_dssp EEEEEEEETT-EEEECGGGTTTCCCGG--------GEEEEESCCBSSSCCTTCEEEEEEEEEECTTCEECSSCEESCCEE
T ss_pred EEEEEEeeCC-EEEECcccccCCCCCc--------cEEEEeeeeeccCCCCceEEEEEEEEEEccccccccccccchhhh
Confidence 4889999987 9999999997643210 12222211 111233444444443 259999
Q ss_pred EEEecC-------CCCccceeecCC-CCCCCCCEEEEEecCCCCC------CceeEEEEeeecc----ccccCCCceecc
Q 019504 122 LKIEAS-------EDLLKPINVGQS-SFLKVGQQCLAIGNPFGFD------HTLTVGVISGLNR----DIFSQAGVTIGG 183 (340)
Q Consensus 122 L~v~~~-------~~~~~~~~l~~~-~~~~~G~~v~~iG~p~g~~------~~~~~G~vs~~~~----~~~~~~~~~~~~ 183 (340)
|++..+ ...+.|+.|... ..+..|..+.+.|+..... .......+.-+.. ............
T Consensus 124 l~L~~~~~~~~~~~~~v~picL~~~~~~~~~~~~~~~~g~G~~~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~ 203 (276)
T 2vnt_A 124 LKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTK 203 (276)
T ss_dssp EEEECTTSCCCCCCSSCCCCBCCCSSCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHTSTTTTGGGSCTT
T ss_pred hhhhccccccccCcccccccccccccccccccceEEEEEeeccccCCCCcchhheeeeeeEecHHHhhhhhccCcccCcc
Confidence 999753 233566767533 3556789999998765321 1122222221111 100000000011
Q ss_pred eEEE-----eeccCCCCccceeecC-CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHc
Q 019504 184 GIQT-----DAAINPGNSGGPLLDS-KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQY 243 (340)
Q Consensus 184 ~i~~-----d~~i~~G~SGGPl~d~-~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 243 (340)
.+.. ....|.|+|||||+-. +| .++||++++.. ++.....+...-+...+.|+++.++.
T Consensus 204 ~~~~~~~~~~~~~C~GDSGGPLv~~~~~~~~lvGIvS~G~~-C~~~~~P~vyt~V~~y~~WI~~~~~~ 270 (276)
T 2vnt_A 204 MLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRG-CALKDKPGVYTRVSHFLPWIRSHTKE 270 (276)
T ss_dssp EEEEECTTSCCCCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSBTTBCEEEEEGGGGHHHHHHHHSC
T ss_pred ceeeccCCCCCCCCCCCCCCeEEEeeCCeEEEEEEEEECCC-CCCCCCCEEEEEHHHHHHHHHHHhhh
Confidence 1211 2346889999999843 34 39999998754 32223345667888889999887753
No 114
>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...
Probab=99.11 E-value=2.5e-09 Score=96.56 Aligned_cols=180 Identities=14% Similarity=0.139 Sum_probs=99.6
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC--------ceeEEEEEEEEeCC--------CCcEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG--------VQKNFEGKLVGADR--------AKDLAV 121 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g--------~~~~~~a~v~~~d~--------~~DlAl 121 (340)
...|.+|+++ ||||+|||+........... ..+.|++... ....+..+-+..++ ..||||
T Consensus 57 ~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~---~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIAL 132 (289)
T 2bdy_A 57 LCGASLISDR-WVLTAAHCLLYPPWDKNFTE---NDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIAL 132 (289)
T ss_dssp EEEEEECSSS-EEEECGGGTEEGGGTEECCG---GGEEEEESCCBSSSCCTTTCEEEEEEEEEECTTCBTTTTCBTCCEE
T ss_pred EEEEEEecCC-EEEEcHHhcccCccccccCc---ccEEEEEccccccccCCCcceeeeeEEEEECCCCCCCCCCCCeEEE
Confidence 5889999977 99999999953210000000 0234443221 11122223233332 359999
Q ss_pred EEEecCC---CCccceeecCCCC----CCCCCEEEEEecCCCC-----------CCceeEEEEeeecccc-ccCCCc-ee
Q 019504 122 LKIEASE---DLLKPINVGQSSF----LKVGQQCLAIGNPFGF-----------DHTLTVGVISGLNRDI-FSQAGV-TI 181 (340)
Q Consensus 122 L~v~~~~---~~~~~~~l~~~~~----~~~G~~v~~iG~p~g~-----------~~~~~~G~vs~~~~~~-~~~~~~-~~ 181 (340)
|+++.+. ..+.|+.|..... +..|..+++.||..-. ...+....+.-+.... ...... ..
T Consensus 133 l~L~~pv~~~~~v~picLp~~~~~~~~~~~g~~~~v~GWG~~~~~~~~~~~~~~~~~L~~~~v~i~~~~~C~~~~~~~i~ 212 (289)
T 2bdy_A 133 MKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRIT 212 (289)
T ss_dssp EEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESSCSSCC-------CCCSBCEEEEEEBCCHHHHHHTCSSCCC
T ss_pred EEECCccccCCcccccCCCCccccccccCCCCEEEEECCCcCCCccccCccccccccceEEEEEEECHHHhhccccCcCC
Confidence 9998763 3467777854321 4579999999976321 1122333332221100 000000 00
Q ss_pred cceEEE--------eeccCCCCccceeecC---CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 182 GGGIQT--------DAAINPGNSGGPLLDS---KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 182 ~~~i~~--------d~~i~~G~SGGPl~d~---~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
..+|-. ....|.|+|||||+-. +| .++||++++.. ++.....+...-+...+.|+++.++
T Consensus 213 ~~~iCag~~~~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~-C~~~~~p~vyt~V~~y~~WI~~~i~ 285 (289)
T 2bdy_A 213 DNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEG-CDRDGKYGFYTHVFRLKKWIQKVID 285 (289)
T ss_dssp TTEEEECCCGGGCCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSS-SSCTTCCEEEEETGGGHHHHHHHHH
T ss_pred CCEEeccCCCCCCCCCccCCCCCccceEEEECCCCCEEEEEEEEECCC-CCCCCCCEEEEEHHHHHHHHHHHHH
Confidence 122322 2357899999999843 34 59999998753 3322345667788888999988765
No 115
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=99.11 E-value=1.4e-09 Score=102.85 Aligned_cols=177 Identities=14% Similarity=0.142 Sum_probs=101.9
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC-----CceeEEEEEEEEeC--------CCCcEEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD-----GVQKNFEGKLVGAD--------RAKDLAVLKI 124 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~-----g~~~~~~a~v~~~d--------~~~DlAlL~v 124 (340)
...|.+|+++ ||||+|||+....... ..+.|++.. .....+..+-+..+ ...|||||++
T Consensus 184 ~CgGsLIs~~-~VLTAAHC~~~~~~~~-------~~~~V~~G~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~L 255 (403)
T 1zjk_A 184 TAAGALLYDN-WVLTAAHAVYEQKHDA-------SALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKL 255 (403)
T ss_dssp CEEEEEETTT-EEEECHHHHGGGTTCS-------TTEEEEESCSBTTCSCCEEEEEEEEEECTTCCTTSCCTTCCEEEEE
T ss_pred ceEEEEecCC-EEEEcHHhCCCCCCCc-------ceEEEEccccccCCCCceEEeEEEEEECCCCCCCCCCcccEEEEEe
Confidence 4889999987 9999999996532100 023344322 11123333333333 2469999999
Q ss_pred ecCC---CCccceeecCCCC---CCCCCEEEEEecCCCCC----CceeEEEEeeecc----ccccCC----CceecceEE
Q 019504 125 EASE---DLLKPINVGQSSF---LKVGQQCLAIGNPFGFD----HTLTVGVISGLNR----DIFSQA----GVTIGGGIQ 186 (340)
Q Consensus 125 ~~~~---~~~~~~~l~~~~~---~~~G~~v~~iG~p~g~~----~~~~~G~vs~~~~----~~~~~~----~~~~~~~i~ 186 (340)
+.+. ..+.|+.|..... +..|+.+++.||..... ..+....+.-+.. ...... ......+|-
T Consensus 256 ~~~v~~~~~v~picLp~~~~~~~~~~~~~~~v~GWG~~~~~~~~~~L~~~~v~v~~~~~C~~~~~~~~~~~~~i~~~~~C 335 (403)
T 1zjk_A 256 NNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLC 335 (403)
T ss_dssp SSCCCCBTTBCCCBCCCGGGGGGSSTTCEEEEEESCTTSSSCCCSBCEEEEEEEECHHHHHHHTTSSSCCSSCSCTTEEE
T ss_pred CCcCcCCCceecccCCCcccccccCCCCeEEEEcCCcCCCCccCcccEEEEEeEeCHHHHhhhhhccccccCcCCCCeEe
Confidence 8763 3567888864332 56799999999864321 2233333332221 101000 000112232
Q ss_pred E-----eeccCCCCccceeecC---CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 187 T-----DAAINPGNSGGPLLDS---KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 187 ~-----d~~i~~G~SGGPl~d~---~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
. ....+.|+|||||+-. +| .++||++++...++.....+...-+...++|+++.++
T Consensus 336 ag~~~~~~~~C~GDSGGPL~~~~~~~~~~~l~GIvS~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~ 401 (403)
T 1zjk_A 336 AGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENIIS 401 (403)
T ss_dssp ECCSSCCTTSCSCSTTCEEEEEETTTTEEEEEEEEEEECSCC--CCCCEEEEEGGGGHHHHHHHHT
T ss_pred eccCCCCCCCCcCCCCccEEEEECCCCcEEEEEEEEECCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 2 2357899999999853 33 5999999874333322335677888888999888664
No 116
>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Probab=99.10 E-value=3.1e-09 Score=99.39 Aligned_cols=178 Identities=17% Similarity=0.156 Sum_probs=101.6
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC-----ceeEEEEEEEEeCC-------------CCcE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG-----VQKNFEGKLVGADR-------------AKDL 119 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g-----~~~~~~a~v~~~d~-------------~~Dl 119 (340)
...|.+|+++ ||||+|||+...... . ..+.|.+... ....+..+-+..++ ..||
T Consensus 142 ~CgGsLIs~~-~VLTAAHCv~~~~~~-~------~~~~V~~G~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~~~~~~~nDI 213 (372)
T 1z8g_A 142 LCGGSLLSGD-WVLTAAHCFPERNRV-L------SRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDI 213 (372)
T ss_dssp EEEEEESSSS-EEEECGGGCCGGGCC-G------GGEEEEESCSBTTCTTSEEECEEEEEEETTCGGGTCTTCCCCTTCC
T ss_pred EEEEEEecCC-EEEEChhhcCCCCCc-c------ceEEEEEeeEeccCCCCcEEEEEEEEECCCccccccCCCCCCCccE
Confidence 3689999987 999999999532110 0 0233433211 11123333333332 3599
Q ss_pred EEEEEecCC---CCccceeecCC-CCCCCCCEEEEEecCCCC-----CCceeEEEEeeeccc---cccCCCcee-cceEE
Q 019504 120 AVLKIEASE---DLLKPINVGQS-SFLKVGQQCLAIGNPFGF-----DHTLTVGVISGLNRD---IFSQAGVTI-GGGIQ 186 (340)
Q Consensus 120 AlL~v~~~~---~~~~~~~l~~~-~~~~~G~~v~~iG~p~g~-----~~~~~~G~vs~~~~~---~~~~~~~~~-~~~i~ 186 (340)
|||+++.+. ..+.|+.|+.. ..+..|+.+++.||.... ........+.-+... ........+ ..+|-
T Consensus 214 ALlkL~~pv~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~~L~~~~v~ii~~~~C~~~~~~~~~i~~~~iC 293 (372)
T 1z8g_A 214 ALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFC 293 (372)
T ss_dssp EEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEE
T ss_pred EEEEECCCCCCCCceeccccCCcccCCCCCCEEEEEecCCCCCCCCCCceeeEEEEEecChHHhCcchhcCCcCCCCeEe
Confidence 999998763 34678888643 245679999999986422 122333333322211 000001011 12232
Q ss_pred E-----eeccCCCCccceeecCC-----C--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHcC
Q 019504 187 T-----DAAINPGNSGGPLLDSK-----G--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQYG 244 (340)
Q Consensus 187 ~-----d~~i~~G~SGGPl~d~~-----G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~~ 244 (340)
. ....+.|+|||||+-.+ | .++||++++.. ++.....+...-+...++|+++.++..
T Consensus 294 ag~~~~~~d~C~GDSGGPLv~~~~~~~~~~~~lvGIvS~G~~-C~~~~~p~vyt~V~~y~~WI~~~i~~~ 362 (372)
T 1z8g_A 294 AGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTG-CALAQKPGVYTKVSDFREWIFQAIKTH 362 (372)
T ss_dssp ESCTTCSCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBSS-SSCTTCCEEEEEGGGGHHHHHHHHHHT
T ss_pred eecCCCCCcCCCCCCccceEeccCcCCCCCEEEEEEEEeCCC-CCCCCCCeEEEEHHHHHHHHHHHHhcc
Confidence 2 23568999999999432 3 69999998753 332234566778888899998876643
No 117
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=99.09 E-value=1.2e-09 Score=98.45 Aligned_cols=171 Identities=13% Similarity=0.063 Sum_probs=100.3
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC----CceeEEEEEEEEeCC-------CCcEEEEEEec
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD----GVQKNFEGKLVGADR-------AKDLAVLKIEA 126 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~----g~~~~~~a~v~~~d~-------~~DlAlL~v~~ 126 (340)
..+|.+|+++ ||||+|||+.... .+.|.+.. .....+..+-+..++ ..|||||+++.
T Consensus 78 ~CgGtLI~~~-~VLTAAHC~~~~~-----------~~~V~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~nDIALl~L~~ 145 (283)
T 3f1s_B 78 FCGGVIIREN-FVLTTAKCSLLHR-----------NITVKTYFNRTSQDPLMIKITHVHVHMRYDADAGENDLSLLELEW 145 (283)
T ss_dssp EEEEEEEETT-EEEECHHHHTSCS-----------SCEEEECTTC-CCCCEEEEEEEEEECTTCBTTTTBTCCEEEEESS
T ss_pred eeccEEecCC-EEEEcHHhcCccC-----------ceEEEEeeeeCCCCcEEEEeEEEEECCCCCCCCCCCCEEEEEeCC
Confidence 4899999987 9999999996543 23343321 111234444444444 35999999987
Q ss_pred CC---CCccceeecCCC----CCCCCCEEEEEecCCCC---CCceeEEEEeeecc----ccccCCCceecceEEE--eec
Q 019504 127 SE---DLLKPINVGQSS----FLKVGQQCLAIGNPFGF---DHTLTVGVISGLNR----DIFSQAGVTIGGGIQT--DAA 190 (340)
Q Consensus 127 ~~---~~~~~~~l~~~~----~~~~G~~v~~iG~p~g~---~~~~~~G~vs~~~~----~~~~~~~~~~~~~i~~--d~~ 190 (340)
+. ..+.|+.|.... .+..|+.+++.||.... ...+....+.-+.. ..... .....+|-. ...
T Consensus 146 pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C~~~~~~--~~~~~~~Ca~~~~~ 223 (283)
T 3f1s_B 146 PIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQVLNV--TVTTRTYCERSSVA 223 (283)
T ss_dssp CCCTTTTCCCCBCCCHHHHHHTTTTTSCEEEEECBCC-------CEEEEEEEECHHHHHHHHTS--CCCTTEEEEECSSC
T ss_pred cccCCCCEEeEECCCCccccccccCCCEEEEEECCCCCCCCCceeeEEEEeEeCHHHHhhhhcC--CCCCCeEcccCCCC
Confidence 63 356778886432 35679999999976411 11222222222211 00100 000112211 122
Q ss_pred cCCCCccceeecC-CCc--EEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHcC
Q 019504 191 INPGNSGGPLLDS-KGN--LIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQYG 244 (340)
Q Consensus 191 i~~G~SGGPl~d~-~G~--VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~~ 244 (340)
...|+|||||+-. +|+ ++||+++.. +......+...-+...++|+++.++..
T Consensus 224 ~~~gDSGgPlv~~~~~~~~l~GIvS~g~--c~~~~~p~vyt~V~~y~~WI~~~~~~~ 278 (283)
T 3f1s_B 224 AMHWMDGSVVTREHRGSWFLTGVLGSQP--VGGQAHMVLVTKVSRYSLWFKQIMNAH 278 (283)
T ss_dssp GGGBCTTCEEEEECSSCEEEEEEECCCS--GGGCSSEEEEEEGGGGHHHHHHHHTC-
T ss_pred CCCCCCCCcEEEEECCEEEEEEEEEeCC--CCCCCcceEEEEhHHhHHHHHHHhhcc
Confidence 3468999999954 565 999998743 222234567788889999999877643
No 118
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Probab=99.08 E-value=4e-09 Score=93.92 Aligned_cols=30 Identities=20% Similarity=0.417 Sum_probs=25.0
Q ss_pred ccCCCCccceeecCCCcEEEEEeeeeeCCC
Q 019504 190 AINPGNSGGPLLDSKGNLIGINTAIITQTG 219 (340)
Q Consensus 190 ~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~ 219 (340)
..+.|+|||||+..+++++||+++....+.
T Consensus 188 dtC~gdsGgPl~~~~~~~~Gi~s~g~~~C~ 217 (268)
T 1arb_A 188 VTEPGSSGSPIYSPEKRVLGQLHGGPSSCS 217 (268)
T ss_dssp CCCTTCTTCEEECTTSCEEEEEEECSCCTT
T ss_pred CCccCcccCCcEeeCCEEEEEEeecCcccC
Confidence 478999999999878999999998754443
No 119
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}
Probab=99.06 E-value=2.4e-09 Score=100.82 Aligned_cols=179 Identities=18% Similarity=0.143 Sum_probs=103.5
Q ss_pred CceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC-----c----eeEEEEEEEEeCC-------CCcEE
Q 019504 57 GNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG-----V----QKNFEGKLVGADR-------AKDLA 120 (340)
Q Consensus 57 ~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g-----~----~~~~~a~v~~~d~-------~~DlA 120 (340)
....|.+|+++ ||||+|||+...... . ..+.|++..- . ...+..+-+..++ ..|||
T Consensus 162 ~~CGGsLIs~~-~VLTAAHCv~~~~~~-~------~~~~V~~G~~~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~nDIA 233 (394)
T 2b9l_A 162 LVCGGSLIAPS-VVLTGAHCVNSYQSN-L------DAIKIRAGEWDTLTEKERLPYQERKIRQVIIHSNFNPKTVVNDVA 233 (394)
T ss_dssp EEEEEEEEETT-EEEECHHHHGGGTTC-G------GGEEEEESCCBTTCCCSSSCCEEEEEEEEEECTTCCTTTCTTCCE
T ss_pred eEeeEEEEeCC-EEEeccceecCCCCC-c------ccEEEEeceeeccCCcCCCccEEEEEEEEEECCCCCCCccccceE
Confidence 35899999987 999999999753210 0 0244444221 0 1223333344443 35999
Q ss_pred EEEEecCC---CCccceeecCCCCCCCCCEEEEEecCCCC-------CCceeEEEEeeecc----ccccC--CC--cee-
Q 019504 121 VLKIEASE---DLLKPINVGQSSFLKVGQQCLAIGNPFGF-------DHTLTVGVISGLNR----DIFSQ--AG--VTI- 181 (340)
Q Consensus 121 lL~v~~~~---~~~~~~~l~~~~~~~~G~~v~~iG~p~g~-------~~~~~~G~vs~~~~----~~~~~--~~--~~~- 181 (340)
||+++.+. ..+.|+.|........++.+++.||.... ........+.-+.. ..... .+ ..+
T Consensus 234 LL~L~~pv~~~~~v~PicLp~~~~~~~~~~~~v~GWG~t~~~~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~i~ 313 (394)
T 2b9l_A 234 LLLLDRPLVQADNIGTICLPQQSQIFDSTECFASGWGKKEFGSRHRYSNILKKIQLPTVDRDKCQADLRNTRLGLKFVLD 313 (394)
T ss_dssp EEEESSCCBCCTTCCCCBCCCTTCCCCCSCEEEEECCTTTTTCTTSSCCBCEEEEECEECHHHHHHHHHTTTTCTTCCCC
T ss_pred EEEecCccccCCceeeeEcCCcccCccCCEEEEEeccCccCCCCCcccccceEEEEEEECHHHHHHHHhhcccccceecC
Confidence 99998763 35678888654444568899999986421 12233333332221 00000 00 001
Q ss_pred cceEEE----eeccCCCCccceeecC----CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHcC
Q 019504 182 GGGIQT----DAAINPGNSGGPLLDS----KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQYG 244 (340)
Q Consensus 182 ~~~i~~----d~~i~~G~SGGPl~d~----~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~~ 244 (340)
..+|-. ....+.|+|||||+-. +| .++||++++.. ++.....+...-+...+.|+++.++..
T Consensus 314 ~~~iCAg~~~g~d~C~GDSGGPLv~~~~~~~~~~~lvGIvS~G~~-C~~~~~PgVYT~V~~y~~WI~~~i~~~ 385 (394)
T 2b9l_A 314 QTFVCAGGEQGKDTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGIG-CGDENVPGVYANVAHFRNWIDQEMQAK 385 (394)
T ss_dssp TTEEEECCBSSCSCCSSCTTCEEEEEETTEEEEEEEEEEESCTTC-CCBSSSCEEEEEGGGGHHHHHHHHHHT
T ss_pred CCEEEeeCCCCCcCCCCCcchhhEEEEcCCCCeEEEEEEEEECCC-CCCCCCCeEEEEHHHhHHHHHHHHHhc
Confidence 112222 2357899999999842 23 69999998753 332233466677888899988876643
No 120
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=99.06 E-value=1.2e-09 Score=100.03 Aligned_cols=168 Identities=14% Similarity=0.073 Sum_probs=98.2
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC----CceeEEEEEEEEeCC-------CCcEEEEEEec
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD----GVQKNFEGKLVGADR-------AKDLAVLKIEA 126 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~----g~~~~~~a~v~~~d~-------~~DlAlL~v~~ 126 (340)
..+|.+|+++ ||||+|||+.... .+.|.+.. .....+..+-+..++ ..|||||+++.
T Consensus 119 ~CgGtLIs~~-~VLTAAHC~~~~~-----------~~~V~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~ 186 (317)
T 3h5c_B 119 FCGGVIIREN-FVLTTAKCSLLHR-----------NITVKTYFNRTSQDPLMIKITHVHVHMRYDADAGENDLSLLELEW 186 (317)
T ss_dssp EEEEEEEETT-EEEECHHHHHSCS-----------SCEEEECTTSCTTSCEEEEEEEEEECTTCBTTTTBSCCEEEEESS
T ss_pred eeeeEEeeCC-EEEEChHhcCcCC-----------ceEEEEeeecCCCCcEEEEeeEEEECCCCCCCCCCCCeEEEEeCC
Confidence 4899999987 9999999996543 23333321 111234444444444 35999999987
Q ss_pred CC---CCccceeecCCC----CCCCCCEEEEEecCCCC---CCceeEEEEeeecc----ccccCCCceecceEE--Eeec
Q 019504 127 SE---DLLKPINVGQSS----FLKVGQQCLAIGNPFGF---DHTLTVGVISGLNR----DIFSQAGVTIGGGIQ--TDAA 190 (340)
Q Consensus 127 ~~---~~~~~~~l~~~~----~~~~G~~v~~iG~p~g~---~~~~~~G~vs~~~~----~~~~~~~~~~~~~i~--~d~~ 190 (340)
+. ..+.|+.|.... .+..|+.+++.||.... ...+....+.-+.. ..... .....+|- ....
T Consensus 187 pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C~~~~~~--~~~~~~~Ca~~~~~ 264 (317)
T 3h5c_B 187 PIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQVLNV--TVTTRTYCERSSVA 264 (317)
T ss_dssp CCCTTTSCCCCBCCCHHHHHHTTTTTSCEEEEBCCTTCCSSSCCCBCCEEEEECHHHHHHHHTC--CCCTTEEEEECSCC
T ss_pred cccCCCCccceeCCCcccccccccCCCeEEEEecCCCCCCCCccceEEEEEEECHHHHhhhhcC--cCCCceeECCCCCC
Confidence 63 346777775432 35679999999985411 11122222222211 10000 00011221 1223
Q ss_pred cCCCCccceeecC-CCc--EEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHH
Q 019504 191 INPGNSGGPLLDS-KGN--LIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLI 241 (340)
Q Consensus 191 i~~G~SGGPl~d~-~G~--VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~ 241 (340)
...|+|||||+-. +|+ ++||+++.. .......+....+...++|+++.+
T Consensus 265 ~~~gDsGgPl~~~~~~~~~l~Gi~S~g~--~~~~~~p~vyt~V~~y~~WI~~~i 316 (317)
T 3h5c_B 265 AMHWMDGSVVTREHRGSWFLTGVLGSQP--VGGQAHMVLVTKVSRYSLWFKQIM 316 (317)
T ss_dssp CCCCCTTCEEEEEETTEEEEEEEECCCC--SSCCTTEEEEEEGGGCHHHHHHHH
T ss_pred CcCCCCCCCEEEecCCEEEEEEEEEECC--CCCCCcceEEEEhHHhHHHHHHHh
Confidence 4578999999954 454 999998743 222334567788888888888754
No 121
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=99.06 E-value=2.4e-09 Score=98.56 Aligned_cols=178 Identities=19% Similarity=0.205 Sum_probs=98.9
Q ss_pred CceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCc--------eeEEEEEEEEeC--------CCCcEE
Q 019504 57 GNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGV--------QKNFEGKLVGAD--------RAKDLA 120 (340)
Q Consensus 57 ~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~--------~~~~~a~v~~~d--------~~~DlA 120 (340)
..+.|.+|+++ ||||+|||+.......... ..+.|.+.... ...+...+++.+ ...|||
T Consensus 111 ~~CgGsLIs~~-~VLTAAHCv~~~~~~~~~~----~~~~V~~G~~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~~~~nDIA 185 (329)
T 1md8_A 111 GRGGGALLGDR-WILTAAHTLYPKEHEAQSN----ASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIA 185 (329)
T ss_dssp SEEEEEEETTT-EEEECGGGTSCTTC---------CCCCEEESCSBHHHHHHHCCCCEEEEEECSSCCSSCTTCCTTCCE
T ss_pred CCcceEEecCC-EEEecCCEEEeCCcccCCC----ceEEEEeccccccccccccceeeEEEEECCCcccccCCCCCccEE
Confidence 35899999987 9999999997422100000 12334333211 012222222211 235999
Q ss_pred EEEEecCC---CCccceeecCCCC-CCCCCEEEEEecCCCC---CCceeEEEEeeecc----cccc-C--CCceecceEE
Q 019504 121 VLKIEASE---DLLKPINVGQSSF-LKVGQQCLAIGNPFGF---DHTLTVGVISGLNR----DIFS-Q--AGVTIGGGIQ 186 (340)
Q Consensus 121 lL~v~~~~---~~~~~~~l~~~~~-~~~G~~v~~iG~p~g~---~~~~~~G~vs~~~~----~~~~-~--~~~~~~~~i~ 186 (340)
||+++.+. ..+.|+.|..... +..|..+++.||.... ........+.-+.. .... . .......+|-
T Consensus 186 Ll~L~~~v~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~~~~~~~~~iC 265 (329)
T 1md8_A 186 LLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFC 265 (329)
T ss_dssp EEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCBCSSSBCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEE
T ss_pred EEEECCcccCCCceEccccCCCccccCCCCEEEEEeCCCCCCCCCccceEEEEEEcCHHHHHHHhhcccccccCCCCeEe
Confidence 99998763 3467888864432 3578999999975422 12233333332211 0000 0 0000012222
Q ss_pred E-----eeccCCCCccceeecC---CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 187 T-----DAAINPGNSGGPLLDS---KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 187 ~-----d~~i~~G~SGGPl~d~---~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
. ....+.|+|||||+-. ++ .++||++++.. ++. ..+...-+...+.|+++.++
T Consensus 266 Ag~~~~~~d~C~GDSGGPL~~~~~~~~~~~l~GIvS~G~~-C~~--~~gvyT~V~~y~~WI~~~i~ 328 (329)
T 1md8_A 266 AGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIG-CSR--GYGFYTKVLNYVDWIKKEME 328 (329)
T ss_dssp ESCTTCSCBCCTTTTTCEEEEEETTTTEEEEEEEEEECSS-SSS--SCEEEEEGGGTHHHHHHHHH
T ss_pred eecCCCCCcCCCCccccceEEEECCCCcEEEEEEEEECCC-cCC--CCcEEEEHHHHHHHHHHHHh
Confidence 2 2457899999999852 23 49999998753 332 34677888888899887654
No 122
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=99.05 E-value=5.8e-09 Score=96.05 Aligned_cols=171 Identities=15% Similarity=0.111 Sum_probs=97.5
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC-----CceeEEEE---EEEEeC--------------C
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD-----GVQKNFEG---KLVGAD--------------R 115 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~-----g~~~~~~a---~v~~~d--------------~ 115 (340)
...|.+|+++ ||||+|||+...... .|.+.. ........ +-+..+ .
T Consensus 104 ~CgGsLIs~~-~VLTAAHC~~~~~~~-----------~v~~G~~~~~~~~~~~~~v~~v~~i~~Hp~y~~~~~~~~~~~~ 171 (333)
T 1elv_A 104 WAGGALINEY-WVLTAAHVVEGNREP-----------TMYVGSTSVQTSRLAKSKMLTPEHVFIHPGWKLLAVPEGRTNF 171 (333)
T ss_dssp EEEEEEEETT-EEEECHHHHTTCSSC-----------CEECSCSBCC-------CEECEEEEEECTTSCCCSSCTTCCCC
T ss_pred ceeEEEecCC-EEEehhheeCCCCCC-----------eEEEeeeecccCccceeeeeccceEEECCCCcccccccccCCC
Confidence 5899999987 999999999764311 111111 00001111 222222 2
Q ss_pred CCcEEEEEEecCC---CCccceeecCCC---CCCCCCEEEEEecCCCC----CCceeEEEEeeecc----ccccCC----
Q 019504 116 AKDLAVLKIEASE---DLLKPINVGQSS---FLKVGQQCLAIGNPFGF----DHTLTVGVISGLNR----DIFSQA---- 177 (340)
Q Consensus 116 ~~DlAlL~v~~~~---~~~~~~~l~~~~---~~~~G~~v~~iG~p~g~----~~~~~~G~vs~~~~----~~~~~~---- 177 (340)
..|||||+++.+. ..+.|+.|.... .+..|+.+++.||.... ........+.-+.. ......
T Consensus 172 ~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v~v~~~~~C~~~~~~~~~~~ 251 (333)
T 1elv_A 172 DNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDRAVRLKAARLPVAPLRKCKEVKVEKPTAD 251 (333)
T ss_dssp TTCCEEEEESSCCCCBTTBCCCBCCCSSGGGCCCTTCEEEEEESCCCSSCSSCSBCEEEEEEEECHHHHHTC--------
T ss_pred cceEEEEEeCCCCcCCCcccceecCCCcccccccCCcEEEEEECcCcCCCCcCceeEEEEEEEEcHHHhhhhhhcccccc
Confidence 4699999998763 346778786433 24569999999986432 12233333332221 000000
Q ss_pred --Ccee-cceEEE----eeccCCCCccceeecC---CC---cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHcC
Q 019504 178 --GVTI-GGGIQT----DAAINPGNSGGPLLDS---KG---NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQYG 244 (340)
Q Consensus 178 --~~~~-~~~i~~----d~~i~~G~SGGPl~d~---~G---~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~~ 244 (340)
...+ ..+|-. ....+.|+|||||+-. ++ .++||++++.. ++. .+....+...+.|+++.++..
T Consensus 252 ~~~~~~~~~~~Cag~~~~~~~C~GDSGGPL~~~~~~~~~~~~l~GIvS~g~~-C~~---~~vyt~V~~y~~WI~~~~~~~ 327 (333)
T 1elv_A 252 AEAYVFTPNMICAGGEKGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQ-CGT---YGLYTRVKNYVDWIMKTMQEN 327 (333)
T ss_dssp --CCCCCTTEEEEECSTTCBCCTTCTTCEEEEECSSCTTCEEEEEEEEECSS-TTS---EEEEEEGGGGHHHHHHHHHHT
T ss_pred cccccCCCCeECccCCCCCCcCcCcCCCceEEEECCCCcEEEEEEEEeeCCC-CCC---CcEEeEHHHHHHHHHHHHhcc
Confidence 0001 122222 2356899999999853 23 49999998743 332 467788888999998877644
No 123
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}
Probab=99.01 E-value=9.3e-09 Score=97.25 Aligned_cols=174 Identities=17% Similarity=0.141 Sum_probs=101.6
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC-------------------ceeEEEEEEEEeCC---
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG-------------------VQKNFEGKLVGADR--- 115 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g-------------------~~~~~~a~v~~~d~--- 115 (340)
...|.+|+++ ||||+|||+..... ..+.|++..- ....+..+-+..++
T Consensus 147 ~CGGsLIs~~-~VLTAAHCv~~~~~---------~~~~V~lG~~~~~~~~~~~~~~~~~~c~~~~~~~~V~~ii~Hp~y~ 216 (408)
T 2xxl_A 147 LCGGAMISER-YILTAAHCVHGLQN---------DLYEIRLGEHRISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYD 216 (408)
T ss_dssp EEEEEEEETT-EEEECGGGTTTCTT---------TEEEEEESCSBTTCSCCEEEETTEEEECCCCEEEEEEEEEECTTCB
T ss_pred EEEEEEEECC-EEEEcHHhcCCCCC---------ceEEEEeeeeECCCccchhhcccccccCCceEEEeEEEEEeCCCCC
Confidence 4789999987 99999999976431 0344444211 00122333333343
Q ss_pred ----CCcEEEEEEecCC---CCccceeecCCCC----CCCCCEEEEEecCCCC----CCceeEEEEeeecc----ccccC
Q 019504 116 ----AKDLAVLKIEASE---DLLKPINVGQSSF----LKVGQQCLAIGNPFGF----DHTLTVGVISGLNR----DIFSQ 176 (340)
Q Consensus 116 ----~~DlAlL~v~~~~---~~~~~~~l~~~~~----~~~G~~v~~iG~p~g~----~~~~~~G~vs~~~~----~~~~~ 176 (340)
..|||||+++.+. ..+.|+.|..... ...|..+++.||.... ........+.-+.. .....
T Consensus 217 ~~~~~nDIALL~L~~~v~~~~~V~PICLp~~~~~~~~~~~~~~~~v~GWG~t~~~~~s~~L~~~~v~iv~~~~C~~~~~~ 296 (408)
T 2xxl_A 217 ARHIMHDIALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTENGSSSDVLLQANVPLQPRSACSQAYRR 296 (408)
T ss_dssp TTTTBSCCEEEEESSCCCCBTTBCCCBCCCSHHHHHHTTTCSEEEEEECCCBTTBCSCSBCEEEEEEEECHHHHHHHHTS
T ss_pred ccccccceEEEEECCccccccCccccCCCCcccccccccCCCEEEEEEeCcCCCCCCCchheEeeeeecCHHHHHHHhcc
Confidence 3599999998763 3567888864322 4578999999986422 12233333322221 11110
Q ss_pred CCceecceEEE----eeccCCCCcccee------ecC-CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHHc
Q 019504 177 AGVTIGGGIQT----DAAINPGNSGGPL------LDS-KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQY 243 (340)
Q Consensus 177 ~~~~~~~~i~~----d~~i~~G~SGGPl------~d~-~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~ 243 (340)
. .. ...|-. ....+.|+||||| +-. +| .++||++++...++.....+...-+...+.|+++.++.
T Consensus 297 ~-~~-~~~iCAg~~~g~d~C~GDSGGPL~~~~~~~~~~~~~~~l~GIvS~G~~~Cg~~~~PgVYTrVs~y~~WI~~~i~~ 374 (408)
T 2xxl_A 297 A-VP-LSQLCVGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGLYTNVGEYVQWITDTMAS 374 (408)
T ss_dssp C-CC-TTEEEECCSCSSSGGGSCTTCEEEEEECCTTCSSCEEEEEEEEEECCCCTTSCCCCEEEEEGGGGHHHHHHHHHH
T ss_pred c-CC-CceEeecCCCCCccCCCcccChhhcCccceEEECCEEEEEEEEEECCCCCCCCCCCeEEEEHHHHHHHHHHHHhh
Confidence 0 00 012221 2356789999999 432 33 68999999744444333356667788888988887654
No 124
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.97 E-value=1.3e-10 Score=88.66 Aligned_cols=92 Identities=15% Similarity=0.065 Sum_probs=71.4
Q ss_pred hHhHHHHHHHHHHcCceeeeeeeEEeccHHHHhhcCCCCCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCE
Q 019504 230 SSTVLKIVPQLIQYGKVVRAGLNVDIAPDLVASQLNVGNGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNK 309 (340)
Q Consensus 230 ~~~i~~~l~~l~~~~~~~~~~lg~~~~~~~~~~~~~~~~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~ 309 (340)
.+.++++.+++++.++..+.++|+...... +...|+.|..+.++|||+++|| ++||+|++|||+
T Consensus 4 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~-----~~~~G~~V~~~~pas~A~~aGl-----------~~GDvI~~ing~ 67 (105)
T 2i4s_A 4 EDKVDAIREAIARNPQEIFQYVRLSQVKRD-----DKVLGYRVSPGKDPVLFESIGL-----------QDGDMAVALNGL 67 (105)
T ss_dssp HHHHHHHHHHHHHSGGGHHHHEEEEEEEET-----TEEEEEEEEECSCTHHHHHHTC-----------CTTCEEEEETTE
T ss_pred hHHHHHHHHHHHHCHHHHHhhceeEEEecC-----CcEEEEEEecCCCCCHHHHcCC-----------CCCCEEEEECCE
Confidence 467889999999999988888888754211 1125788888888889999999 999999999999
Q ss_pred EccCCCCCCCceeEEEee-CCCCceEEEEeCC
Q 019504 310 PVSFSCLSIPSRIYLICA-EPNQDHLTCLKSS 340 (340)
Q Consensus 310 ~v~~~~d~~~~~~~~~~~-~~~~~~~~~~~~~ 340 (340)
+|.+..| +..++... .....+++|.|++
T Consensus 68 ~v~~~~d---~~~~~~~~~~g~~v~l~v~R~g 96 (105)
T 2i4s_A 68 DLTDPNV---MNTLFQSMNEMTEMSLTVERDG 96 (105)
T ss_dssp ETTSTTH---HHHHHHHHTTCSEEEEEEEETT
T ss_pred ECCCHHH---HHHHHHhcCCCCeEEEEEEECC
Confidence 9999998 55555443 3345688888864
No 125
>3mmg_A Nuclear inclusion protein A; 3C-type protease, TEV, TVMV, viral protein, hydrolase; 1.70A {Tobacco vein mottling virus} SCOP: b.47.1.0
Probab=98.95 E-value=5.3e-08 Score=83.37 Aligned_cols=174 Identities=14% Similarity=0.182 Sum_probs=111.3
Q ss_pred HhCCCeEEEEeeeeccccccCCcccccCCceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEE
Q 019504 29 KNTYSVVNIFDVTLRPTLNVTGLVEIPEGNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEG 108 (340)
Q Consensus 29 ~~~~svV~I~~~~~~~~~~~~~~~~~~~~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a 108 (340)
-++..|+++........ ..--|+... .||+|++|...... ..+.|+...|. ..++-
T Consensus 13 ~ia~~iC~l~n~sdg~~-----------~~l~gigyG--~~iItn~HLf~rnn----------g~L~I~s~hG~-f~v~n 68 (241)
T 3mmg_A 13 PISACVCLLENSSDGHS-----------ERLFGIGFG--PYIIANQHLFRRNN----------GELTIKTMHGE-FAVAN 68 (241)
T ss_dssp HHHTTEEEEEEEETTEE-----------EEEEEEEET--TEEEECGGGGSSTT----------CEEEEEETTEE-EEEEE
T ss_pred hhhheEEEEEEEeCCCE-----------EEEEEEeEC--CEEEEChhhcccCC----------CeEEEEECCce-EEccC
Confidence 35567888864221111 123467776 49999999998765 37899988884 22221
Q ss_pred ---EEEEeCCCCcEEEEEEecCCCCccceeec-CCCCCCCCCEEEEEecCCCCCCceeEEEEeeeccccccCCCceecce
Q 019504 109 ---KLVGADRAKDLAVLKIEASEDLLKPINVG-QSSFLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQAGVTIGGG 184 (340)
Q Consensus 109 ---~v~~~d~~~DlAlL~v~~~~~~~~~~~l~-~~~~~~~G~~v~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~ 184 (340)
--+..-+..||.++|++.+ +||.+-. .-..++.||+|+++|..+.. ......||........... .+
T Consensus 69 t~~lki~~i~g~DiiiIrmPkD---fpPf~~kl~FR~P~~~E~V~lVg~~fq~--k~~~s~vSesS~i~p~~~~----~f 139 (241)
T 3mmg_A 69 STQLQMKPVEGRDIIVIKMAKD---FPPFPQKLKFRQPTIKDRVCMVSTNFQQ--KSVSSLVSESSHIVHKEDT----SF 139 (241)
T ss_dssp GGGSCEEECTBSSCEEEECCTT---SCCCCSCCCBCCCCTTCCEEEEEEEECS--SCEEEEEEEEECCEECTTS----SE
T ss_pred CCceeeEEeCCccEEEEeCCCC---CCCcchhcccCCCCCCCeEEEEEeeccc--CCccEEECCcceeEEcCCC----CE
Confidence 1255567889999999764 3333321 23467899999999965443 2233345544333222222 45
Q ss_pred EEEeeccCCCCccceeecC-CCcEEEEEeeeeeCCCCcCceEEEEeh--HhHHHHHHH
Q 019504 185 IQTDAAINPGNSGGPLLDS-KGNLIGINTAIITQTGTSAGVGFAIPS--STVLKIVPQ 239 (340)
Q Consensus 185 i~~d~~i~~G~SGGPl~d~-~G~VVGi~~~~~~~~~~~~~~~~aip~--~~i~~~l~~ 239 (340)
..+-.....|+-|+|+++. +|.+|||++..... ...||+.|+ +...++|+.
T Consensus 140 WkHwIsT~~G~CGlPlVs~~Dg~IVGiHsl~~~~----~~~N~F~~f~~~f~~~~L~~ 193 (241)
T 3mmg_A 140 WQHWITTKDGQAGSPLVSIIDGNILGIHSLTHTT----NGSNYFVEFPEKFVATYLDA 193 (241)
T ss_dssp EEECBCCCTTCTTCEEEETTTCCEEEEEEEEETT----TCCEEEEECCTTHHHHHTTC
T ss_pred EEEEcCCCCCcCCCeEEEcCCCcEEEEEecccCC----CCcEEEEcCCHHHHHHHhhC
Confidence 7788888899999999987 99999999987643 345787777 333335443
No 126
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Probab=98.94 E-value=5.3e-09 Score=99.55 Aligned_cols=180 Identities=15% Similarity=0.144 Sum_probs=98.0
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCC--------ceeEEEEEEEEeCC--------CCcEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDG--------VQKNFEGKLVGADR--------AKDLAV 121 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g--------~~~~~~a~v~~~d~--------~~DlAl 121 (340)
...|.+|+++ ||||+|||+........... ..+.|.+... .......+-+..++ ..||||
T Consensus 192 ~CGGsLIs~~-~VLTAAHCv~~~~~~~~~~~---~~~~V~lG~~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~~nDIAL 267 (424)
T 3nxp_A 192 LCGASLISDR-WVLTAAHCLLYPPWDKNFTE---NDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIAL 267 (424)
T ss_dssp EEEEEESSSS-EEEECHHHHEEGGGTEECCG---GGEEEEESCCBSSSCCTTTCEEECEEEEEECTTCBTTTTSBTCCEE
T ss_pred cceeEEEcCC-EEEEhHHhcCccccccccCc---ccEEEEeCcccccccCCCceeEEEEEEEEeCCCCCCCCCCcCCeEE
Confidence 4889999977 99999999852110000000 0234443211 11122222233333 359999
Q ss_pred EEEecCC---CCccceeecCCCC----CCCCCEEEEEecCCC----------C-CCceeEEEEeeecccc-ccCCCcee-
Q 019504 122 LKIEASE---DLLKPINVGQSSF----LKVGQQCLAIGNPFG----------F-DHTLTVGVISGLNRDI-FSQAGVTI- 181 (340)
Q Consensus 122 L~v~~~~---~~~~~~~l~~~~~----~~~G~~v~~iG~p~g----------~-~~~~~~G~vs~~~~~~-~~~~~~~~- 181 (340)
|+++.+. ..+.|+.|..... +..|..+++.||..- . ...+....+.-+.... .......+
T Consensus 268 LkL~~pv~~s~~v~PicLp~~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~~~~~~~~L~~~~v~ii~~~~C~~~~~~~i~ 347 (424)
T 3nxp_A 268 MKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRIT 347 (424)
T ss_dssp EEESSCCCCCSSCCCCBCCCHHHHHHHHHHCSEEEEEESSHHHHHHHHC----CCSBCEEEEEEBCCHHHHHHTCSSCCC
T ss_pred EEecCccccCCcccccCCCCcccccccccCCCeEEEEecCCCCccCccccCCCCCccceEEEeeEEcHHHhhhhccCcCC
Confidence 9998763 3467777754321 357999999997521 1 2223333333222110 00000001
Q ss_pred cceEEE--------eeccCCCCccceeecC---CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 182 GGGIQT--------DAAINPGNSGGPLLDS---KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 182 ~~~i~~--------d~~i~~G~SGGPl~d~---~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
..+|-. ....+.|+|||||+-. +| .++||++++.. ++.....+...-+...+.|+++.++
T Consensus 348 ~~~iCAg~~~~~~~~~d~C~GDSGGPLv~~~~~~~~~~l~GIvS~G~~-C~~~~~pgVyT~Vs~y~~WI~~~i~ 420 (424)
T 3nxp_A 348 DNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEG-CDRDGKYGFYTHVFRLKKWIQKVID 420 (424)
T ss_dssp TTEEEESCCCBTTBCCCTTCSCTTCEEEEECTTTCCEEEEEEECCSSC-TTTCCSCEEEEECTTCHHHHHHHHH
T ss_pred CCeEecccCCCCCCCCccCCCcCCCceEEEECCCCcEEEEEEEEeCCC-CCCCCCCEEEEEHHHHHHHHHHHHH
Confidence 122222 1257899999999843 34 59999998753 3322334666777788888877654
No 127
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=98.93 E-value=8.7e-09 Score=97.24 Aligned_cols=178 Identities=18% Similarity=0.191 Sum_probs=97.7
Q ss_pred CceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCc--------eeEEEEEEEEeC--------CCCcEE
Q 019504 57 GNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGV--------QKNFEGKLVGAD--------RAKDLA 120 (340)
Q Consensus 57 ~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~--------~~~~~a~v~~~d--------~~~DlA 120 (340)
+...|.+|+++ ||||+|||+.......... ..+.|.+.... ...+...+++.+ ...|||
T Consensus 179 ~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~----~~~~v~~G~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIA 253 (399)
T 1gpz_A 179 GRGGGALLGDR-WILTAAHTLYPKEHEAQSN----ASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIA 253 (399)
T ss_dssp SEEEEEEETTT-EEEECGGGTSCTTC---------CCCEEEESCSBHHHHHHTCCCCEEEEEECSSCCSSSSSCCTTCCE
T ss_pred CCeEEEEeCCC-EEEeChhcccccccccCCc----ceEEEEeccccccccccccccceEEEEECCCCCcCCCCCCCCcEE
Confidence 35899999977 9999999997532110000 12334443211 112222222221 135999
Q ss_pred EEEEecCC---CCccceeecCCCC-CCCCCEEEEEecCCCC---CCceeEEEEeeecc----ccccC-C-Ccee-cceEE
Q 019504 121 VLKIEASE---DLLKPINVGQSSF-LKVGQQCLAIGNPFGF---DHTLTVGVISGLNR----DIFSQ-A-GVTI-GGGIQ 186 (340)
Q Consensus 121 lL~v~~~~---~~~~~~~l~~~~~-~~~G~~v~~iG~p~g~---~~~~~~G~vs~~~~----~~~~~-~-~~~~-~~~i~ 186 (340)
||+++.+. ..+.|+.|..... +..|..+++.||.... ...+....+.-+.. ..... . ...+ ..+|-
T Consensus 254 Ll~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~C 333 (399)
T 1gpz_A 254 LLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFC 333 (399)
T ss_dssp EEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECC-----CCSBCEEEEEEEECHHHHHC-----------CCSEEE
T ss_pred EEEECCcCcCCCceeeeecCCCccccCCCCEEEEEccCCCCCccCccceEEEEEEcCHHHhhhhhhcccccCcCCCCeEe
Confidence 99998763 3467888865432 3568999999976322 12233333322221 10000 0 0000 12222
Q ss_pred E-----eeccCCCCccceeecC---CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 187 T-----DAAINPGNSGGPLLDS---KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 187 ~-----d~~i~~G~SGGPl~d~---~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
. ....+.|+|||||+-. ++ .++||++++.. ++ .+.+...-+...+.|+++.++
T Consensus 334 ag~~~~~~d~C~GDSGGPl~~~~~~~~~~~l~GivS~g~~-C~--~~~~vyt~V~~y~~WI~~~~~ 396 (399)
T 1gpz_A 334 AGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIG-CS--RGYGFYTKVLNYVDWIKKEME 396 (399)
T ss_dssp EECGGGGGGGGCSCSSCEEEEEETTTTEEEEEEEECCCTT-TT--TTEEEEEEGGGGHHHHHHHTC
T ss_pred cccCCCCCccCCCCCchHeEEEECCCCeEEEEEEEEeCCC-cC--CCCeEEEEhHHhHHHHHHHhc
Confidence 2 2357899999999842 23 58999998753 33 235777888888999887654
No 128
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.93 E-value=1.7e-10 Score=92.60 Aligned_cols=85 Identities=20% Similarity=0.173 Sum_probs=60.8
Q ss_pred HcCceeeeeeeEEecc---HHH-HhhcCC---CCCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccC-
Q 019504 242 QYGKVVRAGLNVDIAP---DLV-ASQLNV---GNGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSF- 313 (340)
Q Consensus 242 ~~~~~~~~~lg~~~~~---~~~-~~~~~~---~~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~- 313 (340)
+.+++.+++||+.+.. ... .+.++. ..|++|.+|.++|||+++|| ++||+|++|||++|.+
T Consensus 31 ~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL-----------~~GD~I~~vng~~v~~~ 99 (139)
T 2vz5_A 31 KLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGL-----------QIGDKIMQVNGWDMTMV 99 (139)
T ss_dssp CEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTC-----------CTTCEEEEETTEECTTC
T ss_pred EcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCC-----------CCCCEEEEECCEEcCCC
Confidence 3455567789888632 111 123432 47999999999999999999 9999999999999995
Q ss_pred -CCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 314 -SCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 314 -~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
..| +..++........+++|.|.+
T Consensus 100 ~~~~---~~~~l~~~~g~~v~l~v~R~g 124 (139)
T 2vz5_A 100 THDQ---ARKRLTKRSEEVVRLLVTRQS 124 (139)
T ss_dssp CHHH---HHHHHCCTTCSEEEEEEEECC
T ss_pred CHHH---HHHHHHhCCCCEEEEEEEECC
Confidence 455 455555433345788888864
No 129
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.89 E-value=2.2e-10 Score=82.86 Aligned_cols=70 Identities=14% Similarity=0.232 Sum_probs=52.1
Q ss_pred ccHHHHhhcCCC--CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEcc--CCCCCCCceeEEEeeCCC
Q 019504 256 APDLVASQLNVG--NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVS--FSCLSIPSRIYLICAEPN 330 (340)
Q Consensus 256 ~~~~~~~~~~~~--~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~--~~~d~~~~~~~~~~~~~~ 330 (340)
.++...+.+++. .|++|.+|.++|||+++| | ++||+|++|||+++. +..| +..++.... +
T Consensus 7 ~~~~~~~~~g~~~~~gv~V~~v~~~s~A~~aG~l-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~~~~-~ 71 (81)
T 2rcz_A 7 VKSRKNEEYGLRLASHIFVKEISQDSLAARDGNI-----------QEGDVVLKINGTVTENMSLTD---AKTLIERSK-G 71 (81)
T ss_dssp ECCSTTCCCCEEEEEEEEEEEECTTSHHHHHSSC-----------CTTCEEEEETTEECTTCCHHH---HHHHHHTST-T
T ss_pred EECCCCCCCCEEEeCCEEEEEECCCChHHHCCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHCCC-C
Confidence 334444555554 699999999999999999 8 999999999999999 6666 444444333 4
Q ss_pred CceEEEEeCC
Q 019504 331 QDHLTCLKSS 340 (340)
Q Consensus 331 ~~~~~~~~~~ 340 (340)
..++++.|++
T Consensus 72 ~v~l~v~R~g 81 (81)
T 2rcz_A 72 KLKMVVQRDE 81 (81)
T ss_dssp EEEEEEEC--
T ss_pred eEEEEEEeCC
Confidence 5788888864
No 130
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.88 E-value=1.7e-10 Score=85.35 Aligned_cols=59 Identities=20% Similarity=0.127 Sum_probs=48.4
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEc--cCCCCCCCceeEEEe-eCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPV--SFSCLSIPSRIYLIC-AEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v--~~~~d~~~~~~~~~~-~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||+++|| ++||+|++|||++| .+..| +..++.. ......+++|.|++
T Consensus 28 ~g~~V~~V~~~spA~~aGl-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~~~~~g~~v~l~v~R~g 89 (90)
T 2eaq_A 28 PGIFVASVEAGSPAEFSQL-----------QVDDEIIAINNTKFSYNDSKE---WEEAMAKAQETGHLVMDVRRYG 89 (90)
T ss_dssp TEEEEEEECTTSHHHHTTC-----------CTTCEEEEETTEECCTTCHHH---HHHHHHHHHHHTEEEEEEEEEC
T ss_pred CCEEEEEECCCChHHHcCC-----------CCCCEEEEECCEEccCCCHHH---HHHHHHhcCCCCEEEEEEEeCC
Confidence 5999999999999999999 99999999999999 77776 5555543 23345788998864
No 131
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.88 E-value=2.3e-10 Score=89.09 Aligned_cols=83 Identities=18% Similarity=0.178 Sum_probs=60.1
Q ss_pred HHcCceeeeee----eEEeccHHHHhhcCC------CCCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEE
Q 019504 241 IQYGKVVRAGL----NVDIAPDLVASQLNV------GNGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKP 310 (340)
Q Consensus 241 ~~~~~~~~~~l----g~~~~~~~~~~~~~~------~~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~ 310 (340)
+++|++.++|+ ++.+.... ..+++ ..|++|.+|.+++||+++|| ++||+|++|||++
T Consensus 7 ~~~g~v~r~~l~~~~~v~l~~~~--~~lG~~~~~~~~~gv~V~~V~~~spA~~aGL-----------~~GD~Il~vng~~ 73 (117)
T 1uit_A 7 GGERRKDRPYVEEPRHVKVQKGS--EPLGISIVSGEKGGIYVSKVTVGSIAHQAGL-----------EYGDQLLEFNGIN 73 (117)
T ss_dssp CCCCCSCCCCSCCCEEEEEECSS--CCCCEEEEECTTSCEEEEEECTTSHHHHHTC-----------CTTCEECEETTEE
T ss_pred cccCccccccCCCCEEEEEEeCC--CCccEEEEccCCCCEEEEEECCCCHHHHcCC-----------CCCCEEEEECCEE
Confidence 45677888888 77765422 22222 36999999999999999999 9999999999999
Q ss_pred ccCCCCCCCceeEEEe-eCCCCceEEEEeC
Q 019504 311 VSFSCLSIPSRIYLIC-AEPNQDHLTCLKS 339 (340)
Q Consensus 311 v~~~~d~~~~~~~~~~-~~~~~~~~~~~~~ 339 (340)
|.+..+ +...+.. ......+++|.|.
T Consensus 74 v~~~~~---~~~~~~~~~~g~~v~l~v~r~ 100 (117)
T 1uit_A 74 LRSATE---QQARLIIGQQCDTITILAQYN 100 (117)
T ss_dssp TTTCCH---HHHHHHTTSCCSEEEEEECCC
T ss_pred CCCCCH---HHHHHHHHcCCCeEEEEEEEC
Confidence 999876 3333322 2333457777765
No 132
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.84 E-value=1.8e-09 Score=82.10 Aligned_cols=78 Identities=21% Similarity=0.215 Sum_probs=55.9
Q ss_pred eeeeeEEec---cHHHHh-hc---CCCCCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCC--CCC
Q 019504 248 RAGLNVDIA---PDLVAS-QL---NVGNGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSC--LSI 318 (340)
Q Consensus 248 ~~~lg~~~~---~~~~~~-~~---~~~~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~--d~~ 318 (340)
+++||+.+. +...++ .+ ....|++|.+|.++|||+++|| ++||+|++|||+++.+.. |
T Consensus 18 ~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl-----------~~GD~I~~ing~~v~~~~~~~-- 84 (104)
T 3sfj_A 18 NLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGL-----------QIGDKIMQVNGWDMTMVTHDQ-- 84 (104)
T ss_dssp EEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHTC-----------CTTCEEEEETTEECTTCCHHH--
T ss_pred CCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcCC-----------CCCCEEEEECCEECCCCCHHH--
Confidence 457887765 221111 12 2247999999999999999999 999999999999998876 5
Q ss_pred CceeEEEeeCCCCceEEEEeC
Q 019504 319 PSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~ 339 (340)
+...+........++++.|.
T Consensus 85 -~~~~l~~~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 85 -ARKRLTKRSEEVVRLLVTRQ 104 (104)
T ss_dssp -HHHHHTCTTCSEEEEEEEEC
T ss_pred -HHHHHHhCCCCEEEEEEEcC
Confidence 44445443444577788773
No 133
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.84 E-value=4.9e-10 Score=83.17 Aligned_cols=72 Identities=15% Similarity=0.258 Sum_probs=53.0
Q ss_pred EEeccHHHHhhcCCC--CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEcc--CCCCCCCceeEEEee
Q 019504 253 VDIAPDLVASQLNVG--NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVS--FSCLSIPSRIYLICA 327 (340)
Q Consensus 253 ~~~~~~~~~~~~~~~--~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~--~~~d~~~~~~~~~~~ 327 (340)
++..+...++.+|+. .|++|.+|.++|||+++| | ++||+|++|||+++. +..| +..++...
T Consensus 6 v~~~~~~~~~~~g~~~~~gv~V~~v~~~s~A~~aG~l-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~~~ 71 (92)
T 3cyy_A 6 VTLVKSAKNEEYGLRLASHIFVKEISQDSLAARDGNI-----------QEGDVVLKINGTVTENMSLTD---AKTLIERS 71 (92)
T ss_dssp EEEECSSTTSCCCEEEEEEEEEEEECTTCHHHHSCCC-----------CTTCEEEEETTEECTTCCHHH---HHHHHHTT
T ss_pred EEEEeCCCCCCCCEEEeCCEEEEEECCCChHHhcCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHcC
Confidence 344444444555654 699999999999999999 8 999999999999999 7766 44444432
Q ss_pred CCCCceEEEEeC
Q 019504 328 EPNQDHLTCLKS 339 (340)
Q Consensus 328 ~~~~~~~~~~~~ 339 (340)
. ...++++.|+
T Consensus 72 ~-~~v~l~v~r~ 82 (92)
T 3cyy_A 72 K-GKLKMVVQRD 82 (92)
T ss_dssp T-TEEEEEEEC-
T ss_pred C-CcEEEEEEeC
Confidence 2 3567888875
No 134
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=98.83 E-value=3.6e-08 Score=97.07 Aligned_cols=172 Identities=15% Similarity=0.157 Sum_probs=85.1
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC--------CceeEEEEEEEEeCC-------CCcEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD--------GVQKNFEGKLVGADR-------AKDLAVL 122 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~--------g~~~~~~a~v~~~d~-------~~DlAlL 122 (340)
...|.||+++ ||||+|||+...... .+.|.+.. .....+..+-+..++ ..|||||
T Consensus 346 ~CGGsLIs~~-~VLTAAHCv~~~~~~---------~~~V~~G~~~~~~~~~~~~~~~~V~~ii~Hp~Y~~~~~~nDIALl 415 (565)
T 2xrc_A 346 TCGGIYIGGC-WILTAAHCLRASKTH---------RYQIWTTVVDWIHPDLKRIVIEYVDRIIFHENYNAGTYQNDIALI 415 (565)
T ss_dssp CCCCEEEETT-EEEECHHHHTTCSSC---------CEEEEC-------------CEEEEEEEEECTTCCTTTCTTCCEEE
T ss_pred eeeEEEEeCC-EEEEChhhcccCCCc---------ceEEEEEEeeccCCCCCccEEEEEEEEEeCCCCCCCcccccceee
Confidence 4789999987 999999999764311 22232211 011123333334443 3599999
Q ss_pred EEecCCC-------CccceeecCC-CCCCCCCEEEEEecCCCCC----CceeEEEEeeecc--ccccCCCceecc-eEEE
Q 019504 123 KIEASED-------LLKPINVGQS-SFLKVGQQCLAIGNPFGFD----HTLTVGVISGLNR--DIFSQAGVTIGG-GIQT 187 (340)
Q Consensus 123 ~v~~~~~-------~~~~~~l~~~-~~~~~G~~v~~iG~p~g~~----~~~~~G~vs~~~~--~~~~~~~~~~~~-~i~~ 187 (340)
+++.+.. .+.|+.|... ..+..|+.+++.||..... .......+.-+.. ...... .... +|-.
T Consensus 416 kL~~~v~~~~~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v~i~~~C~~~~~~~--~~~~~~iCA 493 (565)
T 2xrc_A 416 EMKKDGNKKDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDNERVFSLQWGEVKLISNCSKFYGNR--FYEKEMECA 493 (565)
T ss_dssp EECCCSSSSCSCCTTCCCCBCCSCTTSSCTTCEEEEEC-------------CEEEEEECSCTHHHHTTS--CCTTTEEEE
T ss_pred eeccccccccccccceeeeecCCcccccCCCCEEEEEeCccCCCCCccceeeEEeeeehHHhHHhhccC--cCCCceEEe
Confidence 9987631 2456666533 2456799999999753221 1222222322211 101000 0011 2211
Q ss_pred -----eeccCCCCccceeecC--CCc--EEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 188 -----DAAINPGNSGGPLLDS--KGN--LIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 188 -----d~~i~~G~SGGPl~d~--~G~--VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
....+.|+|||||+-. +|+ ++||++++.. .+.....+...-+...+.|+++.+.
T Consensus 494 g~~~g~~d~C~GDSGGPLv~~~~~~~~~lvGIvS~G~~-C~~~~~PgVYTrVs~y~~WI~~~i~ 556 (565)
T 2xrc_A 494 GTYDGSIDACKGDSGGPLVCMDANNVTYVWGVVSWGEN-CGKPEFPGVYTKVANYFDWISYHVG 556 (565)
T ss_dssp EEC----------CCCEEEEECTTCCEEEEEEECC-------CCCCEEEEEGGGGHHHHHHHC-
T ss_pred CCCCCCCccCCCccccceEEEeCCCcEEEEEEEeeCCC-CCCCCCCEEEEEHHHHHHHHHHHhc
Confidence 1346789999999843 453 8999998753 2222334566778888899887654
No 135
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Probab=98.83 E-value=6.5e-08 Score=98.37 Aligned_cols=175 Identities=15% Similarity=0.193 Sum_probs=100.7
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC-------CceeEEEEEEEEeC-CCCcEEEEEEecCC-
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD-------GVQKNFEGKLVGAD-RAKDLAVLKIEASE- 128 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~-------g~~~~~~a~v~~~d-~~~DlAlL~v~~~~- 128 (340)
...|.||+++ ||||+|||+...... . .+.|.+.. .....+...-+..+ ...|||||+|+.+.
T Consensus 587 ~CGGSLIs~~-wVLTAAHCv~~~~~~----~----~~~V~lG~~~~~~~~~~~q~~~V~~i~~hp~~nDIALLkL~~pv~ 657 (791)
T 4dur_A 587 FCGGTLISPE-WVLTAAHCLEKSPRP----S----SYKVILGAHQEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAV 657 (791)
T ss_dssp EEEEEEEETT-EEEECGGGGSSCCCG----G----GCEEEESCCBSSSCCTTCEEEEEEEEEECTTCCSCEEEEESSCCC
T ss_pred EEEEEEEeCC-EEEECHHHcCCcCCC----c----eEEEEeccccccCCCCccEEEEEEEEECCCCCCceEEEEecCccc
Confidence 4899999987 999999999753210 0 22333321 11123333333333 35799999998763
Q ss_pred --CCccceeecCCC-CCCCCCEEEEEecCCCC----CCceeEEEEeeeccc---cc-cCCCceecceEEE-----eeccC
Q 019504 129 --DLLKPINVGQSS-FLKVGQQCLAIGNPFGF----DHTLTVGVISGLNRD---IF-SQAGVTIGGGIQT-----DAAIN 192 (340)
Q Consensus 129 --~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~----~~~~~~G~vs~~~~~---~~-~~~~~~~~~~i~~-----d~~i~ 192 (340)
..+.|+.|.... .+..|..+++.||.... ...+....+.-+... .. .........+|-. ....+
T Consensus 658 ~s~~V~PIcLP~~~~~~~~g~~~~vsGWG~t~~~~~s~~L~~~~v~ii~~~~C~~~~~~~~~i~~~~iCAg~~~gg~daC 737 (791)
T 4dur_A 658 ITDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSC 737 (791)
T ss_dssp CCSSCCCCBCCCTTCCCCTTCEEEEEECCCC---CCTTBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCSSSCCCBC
T ss_pred cCCceeeeeccCcccccCCCCEEEEEEeCCCCCCCCCCeeEEEEEEEeCHHHhhcccccCCCCCCCeEEeccCCCCCCCC
Confidence 346777775433 45679999999986421 122333333322211 00 0000001122222 23467
Q ss_pred CCCccceeecC-CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 193 PGNSGGPLLDS-KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 193 ~G~SGGPl~d~-~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
.|+|||||+-. +| .|+||++++... +.....+...-+...+.+|++.++
T Consensus 738 ~GDSGGPLv~~~~~~~~LvGIvS~G~gC-~~~~~PgVYTrVs~y~dWI~~~i~ 789 (791)
T 4dur_A 738 QGDSGGPLVCFEKDKYILQGVTSWGLGC-ARPNKPGVYVRVSRFVTWIEGVMR 789 (791)
T ss_dssp CSCTTCEEEEEETTEEEEEEECCTTTCC-BBTTBCEEEEEGGGTHHHHHHHHH
T ss_pred CCCcccceEEEeCCeEEEEEEEEeCCCC-CCCCCCeEEEEHHHHHHHHHHHHH
Confidence 89999999954 23 499999986432 222335667888888999988765
No 136
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.82 E-value=1.4e-09 Score=80.63 Aligned_cols=58 Identities=22% Similarity=0.206 Sum_probs=48.2
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCC--CCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSC--LSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~--d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||+++|| ++||+|++|||++|.+.. | +..++.. .....++++.|++
T Consensus 27 ~g~~V~~V~~~spA~~aGl-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~~-~g~~v~l~v~R~g 86 (91)
T 2pkt_A 27 QPLAISRVTPGSKAALANL-----------CIGDVITAIDGENTSNMTHLE---AQNRIKG-CTDNLTLTVARSE 86 (91)
T ss_dssp EEEEEEEECTTSHHHHTTC-----------CTTCEEEEETTEECTTCCHHH---HHHHHHT-CSSEEEEEEEEEC
T ss_pred CCeEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHc-CCCeEEEEEEECC
Confidence 5899999999999999999 999999999999999988 5 4444444 4455788888863
No 137
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.82 E-value=1.2e-09 Score=82.87 Aligned_cols=78 Identities=21% Similarity=0.121 Sum_probs=52.1
Q ss_pred eeeeeEEecc--HHHHhhcCC--CCCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccC--CCCCCCc
Q 019504 248 RAGLNVDIAP--DLVASQLNV--GNGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSF--SCLSIPS 320 (340)
Q Consensus 248 ~~~lg~~~~~--~~~~~~~~~--~~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~--~~d~~~~ 320 (340)
+.+||+.+.. ....+.++. ..|++|.+|.++|||+++| | ++||+|++|||++|.+ ..| +
T Consensus 15 ~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l-----------~~GD~I~~ing~~v~~~~~~~---~ 80 (103)
T 2fcf_A 15 SKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTL-----------KPGDRIVEVDGMDLRDASHEQ---A 80 (103)
T ss_dssp -CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCC-----------CTTCEEEEETTEECTTCCHHH---H
T ss_pred CCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCC-----------CCCCEEEEECCEECCCCCHHH---H
Confidence 4567776643 222222222 3799999999999999999 9 9999999999999998 555 4
Q ss_pred eeEEEeeCCCCceEEEEeCC
Q 019504 321 RIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~ 340 (340)
..++... ++..+++|.|.+
T Consensus 81 ~~~l~~~-~~~v~l~v~r~~ 99 (103)
T 2fcf_A 81 VEAIRKA-GNPVVFMVQSII 99 (103)
T ss_dssp HHHHHTC-CSSEEEEEECCC
T ss_pred HHHHHhC-CCcEEEEEEECC
Confidence 5555444 346888888853
No 138
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.80 E-value=1.4e-09 Score=79.83 Aligned_cols=58 Identities=21% Similarity=0.181 Sum_probs=48.9
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccC--CCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSF--SCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~--~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||+++|| ++||+|++|||+++.+ ..| +..++.... ...++++.|.+
T Consensus 26 ~g~~V~~V~~~spA~~aGL-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~~~~-~~v~l~v~R~~ 85 (87)
T 2pa1_A 26 TPIMVTKVAERGKAKDADL-----------RPGDIIVAINGESAEGMLHAE---AQSKIRQSP-SPLRLQLDRIT 85 (87)
T ss_dssp EEEEEEEECSSSHHHHTTC-----------CTTCEEEEETTEESTTCCHHH---HHHHHHTCC-SSEEEEEEECC
T ss_pred CCEEEEEECCCChHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHcCC-CeEEEEEEecC
Confidence 5899999999999999999 9999999999999999 455 555555444 66899999864
No 139
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=98.80 E-value=9.3e-09 Score=104.60 Aligned_cols=178 Identities=18% Similarity=0.164 Sum_probs=97.2
Q ss_pred CceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEEEEEEeCC----------------CCcEE
Q 019504 57 GNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEGKLVGADR----------------AKDLA 120 (340)
Q Consensus 57 ~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a~v~~~d~----------------~~DlA 120 (340)
....|.+|+++ ||||+|||+...... ..+.|.+.... ..+..+-+..++ .+|||
T Consensus 484 ~~CgGsLIs~~-~VLTAAHC~~~~~~~--------~~~~V~~G~~~-~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIA 553 (741)
T 3hrz_D 484 ESCMGAVVSEY-FVLTAAHCFTVDDKE--------HSIKVSVGGEK-RDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVA 553 (741)
T ss_dssp --EEEEECSSS-EEEECGGGCC-------------CCEEEEETTCS-CCEEEEEEEECTTCCTTTTGGGTCSCCCTTCCE
T ss_pred CEEEEEEecCC-EEEEchhhccccCCc--------ceEEEEeCCCc-eEEEEEEEEECCCCCcccccccccCCccCCcEE
Confidence 35899999987 999999999753210 14566665322 233333344433 35999
Q ss_pred EEEEecCC---CCccceeecCCC------CCCCCCEEEEEecCCCCC------------CceeEEEEeeecc-------c
Q 019504 121 VLKIEASE---DLLKPINVGQSS------FLKVGQQCLAIGNPFGFD------------HTLTVGVISGLNR-------D 172 (340)
Q Consensus 121 lL~v~~~~---~~~~~~~l~~~~------~~~~G~~v~~iG~p~g~~------------~~~~~G~vs~~~~-------~ 172 (340)
||+++.+. ..+.|+.|.... .+..|..+.+.||..-.. ..+....+.-... .
T Consensus 554 LlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~~~~~~~L~~~~v~i~~~~~~~~C~~ 633 (741)
T 3hrz_D 554 LIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNGDKKGSCER 633 (741)
T ss_dssp EEEESSCCCCCSSCCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEEESSSCEEEEEEEEECSTTHHHHHH
T ss_pred EEEECCcCcCCCCccccccCCcccccchhccCCCCccccccccccccccccceeccccccccccceeEeecCcccchhhh
Confidence 99998763 346777775221 245566666666532111 1122222211110 0
Q ss_pred -cc--cCC-------CceecceEEE-------eeccCCCCccceeecC-CC--cEEEEEeeee-eCCCC---cCce----
Q 019504 173 -IF--SQA-------GVTIGGGIQT-------DAAINPGNSGGPLLDS-KG--NLIGINTAII-TQTGT---SAGV---- 224 (340)
Q Consensus 173 -~~--~~~-------~~~~~~~i~~-------d~~i~~G~SGGPl~d~-~G--~VVGi~~~~~-~~~~~---~~~~---- 224 (340)
.. ... ......+|-. +...+.|+|||||+-. +| .++||++++. ..++. ....
T Consensus 634 ~~~~~~~~~~~~~~~~~i~~~~lCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~lvGIvS~G~~~~C~~~~~~~~p~~~~ 713 (741)
T 3hrz_D 634 DAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISWGVVDVCKNQKRQKQVPAHA 713 (741)
T ss_dssp GGGGSTTCTTCSSGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEEEEEESSCCCC------CCCTTC
T ss_pred hhhhccccccccccccccCCCeEecCCcCCCCCCCcCcCcccCceEEeeCCeEEEEEEEeecCCcccCCcccccCCCCCc
Confidence 00 000 0000122322 2346889999999954 33 3999999986 23332 1222
Q ss_pred -EEEEehHhHHHHHHHHHHcC
Q 019504 225 -GFAIPSSTVLKIVPQLIQYG 244 (340)
Q Consensus 225 -~~aip~~~i~~~l~~l~~~~ 244 (340)
++...+...++|+++.++..
T Consensus 714 ~~vyt~V~~~~~WI~~~i~~~ 734 (741)
T 3hrz_D 714 RDFHINLFQVLPWLKEKLQDE 734 (741)
T ss_dssp EEEEEEGGGSHHHHHHHTTTS
T ss_pred cceEEEhHHhHHHHHHHhcCC
Confidence 67788999999999987654
No 140
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.79 E-value=4.3e-10 Score=83.39 Aligned_cols=58 Identities=21% Similarity=0.167 Sum_probs=48.4
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEee-CCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICA-EPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~-~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||++ || ++||+|++|||++|.+..| +..++... .....+++|+|++
T Consensus 1 ~Gv~V~~V~~~spA~~-GL-----------~~GD~I~~InG~~v~~~~~---l~~~l~~~~~g~~v~l~v~R~g 59 (91)
T 2kjp_A 1 NGIYASSVVENMPAKG-KI-----------EVGDKIISADGKNYQSAEK---LIDYISSKKAGDKVTLKIEREE 59 (91)
T ss_dssp CCSSCCCCCCSSCCSS-CC-----------CSSCEEEEETTBCCSSHHH---HHHHHSSCCSSCEECEEEESSS
T ss_pred CceEEEEECCCChHHH-cC-----------CCCCEEEEECCEECCCHHH---HHHHHHcCCCCCEEEEEEEECC
Confidence 4889999999999999 99 9999999999999999987 66666554 3445788888864
No 141
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=98.79 E-value=4e-08 Score=97.92 Aligned_cols=173 Identities=17% Similarity=0.178 Sum_probs=90.2
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecC-------CceeEEEEEEEEeCC-------CCcEEEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASD-------GVQKNFEGKLVGADR-------AKDLAVLK 123 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~-------g~~~~~~a~v~~~d~-------~~DlAlL~ 123 (340)
...|.||+++ ||||+|||+...... ..+.|.+.. .....+..+-+..++ .+|||||+
T Consensus 415 ~CgGsLIs~~-~VLTAAHC~~~~~~~--------~~~~V~~G~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~nDIALlk 485 (625)
T 2f83_A 415 LCGGSIIGNQ-WILTAAHCFYGVESP--------KILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLK 485 (625)
T ss_dssp EEEEEECSSS-EEEECGGGGSSCCCG--------GGEEEEESCSBGGGCCSSCCCEEEEEEEECTTCCBTTTBCCCEEEE
T ss_pred EEEEEEECCC-EEEEcHHhCCCCCCC--------ceEEEEEEeccCCCCCCCceEEeEEEEEECCccCcCCccccEEEEE
Confidence 4789999977 999999999753210 023333321 011123333334443 35999999
Q ss_pred EecCC---CCccceeecCCC-CCCCCCEEEEEecCCCC-----CCceeEEEEeeecc----cccc----CCCceecceEE
Q 019504 124 IEASE---DLLKPINVGQSS-FLKVGQQCLAIGNPFGF-----DHTLTVGVISGLNR----DIFS----QAGVTIGGGIQ 186 (340)
Q Consensus 124 v~~~~---~~~~~~~l~~~~-~~~~G~~v~~iG~p~g~-----~~~~~~G~vs~~~~----~~~~----~~~~~~~~~i~ 186 (340)
++.+. ..+.|+.|.... ....++.+++.||.... ...+....+.-+.. .... .....+.....
T Consensus 486 L~~pv~~~~~v~PicLp~~~~~~~~~~~~~v~GWG~~~~~~~~s~~L~~~~v~i~~~~~C~~~~~~~~i~~~~iCag~~~ 565 (625)
T 2f83_A 486 LETTVNYTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGHKITHKMICAGYRE 565 (625)
T ss_dssp ESSCCCCBTTBCCCBCCCGGGTTCCCCCEEECBCC------CCCSBCBCCEECCCCHHHHHTTCTTSCCCTTBCCC----
T ss_pred ECCcccCCCceeeeEcCCccCCccCCCEEEEEEecCCCCCCcCCcccEEEEEEEcCHHHHHHHhccCCCCCCeEEeecCC
Confidence 98763 346777775433 23568899999975321 11222222221111 0000 00000001111
Q ss_pred EeeccCCCCccceeecC-CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHH
Q 019504 187 TDAAINPGNSGGPLLDS-KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQL 240 (340)
Q Consensus 187 ~d~~i~~G~SGGPl~d~-~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l 240 (340)
-....+.|+|||||+-. +| .++||++++.. ++.....+...-+...+.|+++.
T Consensus 566 ~~~d~C~GDSGGPLv~~~~~~~~lvGIvS~G~~-C~~~~~P~vyT~V~~y~~WI~~~ 621 (625)
T 2f83_A 566 GGKDACKGDSGGPLSCKHNEVWHLVGITSWGEG-CAQRERPGVYTNVVEYVDWILEK 621 (625)
T ss_dssp ------CCCTTCEEEEEETTEEEEEEEEEECCC-----CCCCEEEEGGGGHHHHHHT
T ss_pred CCCcCCCCCcccceEEEECCeEEEEEEEEeCCC-CCCCCCCeEEEEHHHHHHHHHHH
Confidence 22356889999999853 45 59999998753 22122234567777888888764
No 142
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.77 E-value=2.2e-09 Score=79.52 Aligned_cols=68 Identities=26% Similarity=0.337 Sum_probs=54.3
Q ss_pred eeeeEEeccHHHHhhcCCCCCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEc-cCCCCCCCceeEEEe
Q 019504 249 AGLNVDIAPDLVASQLNVGNGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPV-SFSCLSIPSRIYLIC 326 (340)
Q Consensus 249 ~~lg~~~~~~~~~~~~~~~~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v-~~~~d~~~~~~~~~~ 326 (340)
.+||+.+... ..|++|.+|.+++||+++| | ++||+|++|||++| .+..| +..++..
T Consensus 18 ~~lG~~i~~~--------~~~v~V~~V~~~spA~~ag~L-----------~~GD~I~~ing~~v~~~~~~---~~~~l~~ 75 (91)
T 2e7k_A 18 EHLGVTFRVE--------GGELVIARILHGGMVAQQGLL-----------HVGDIIKEVNGQPVGSDPRA---LQELLRN 75 (91)
T ss_dssp CCCCEEEEES--------SSSEEEEEECSSSHHHHHCCC-----------CTTCEEEEETTEECTTCHHH---HHHHHHT
T ss_pred CcEeEEEEec--------CCCEEEEEECCCCHHHHcCCC-----------CCCCEEEEECCEECCCCHHH---HHHHHHc
Confidence 4677776542 3699999999999999987 7 99999999999999 77776 5555554
Q ss_pred eCCCCceEEEEeC
Q 019504 327 AEPNQDHLTCLKS 339 (340)
Q Consensus 327 ~~~~~~~~~~~~~ 339 (340)
. ....+++++|+
T Consensus 76 ~-~~~v~l~v~~~ 87 (91)
T 2e7k_A 76 A-SGSVILKILSG 87 (91)
T ss_dssp C-CSSBCEEEECC
T ss_pred C-CCeEEEEEEEC
Confidence 3 45688999875
No 143
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=98.76 E-value=1.5e-08 Score=98.30 Aligned_cols=179 Identities=17% Similarity=0.151 Sum_probs=96.7
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEEEEEEeCC----------------CCcEEE
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEGKLVGADR----------------AKDLAV 121 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a~v~~~d~----------------~~DlAl 121 (340)
...|.+|+++ ||||+|||+...... ..+.|.+.... ..+..+-+..++ .+||||
T Consensus 243 ~CgGsLIs~~-~VLTAAHC~~~~~~~--------~~~~v~~G~~~-~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIAL 312 (497)
T 1rrk_A 243 SCMGAVVSEY-FVLTAAHCFTVDDKE--------HSIKVSVGGEK-RDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVAL 312 (497)
T ss_dssp EEEEEECSSS-EEEECGGGCCTTCCG--------GGEEEEETTCS-SCEEEEEEEECTTCCTTTTGGGTCSSCCTTCCEE
T ss_pred eeEEEEecCC-EEEECHHhCCCCCCc--------eEEEEEeCCcc-ceeeeEEEEeCCCccccccccccccccCCCcEEE
Confidence 5889999987 999999999753210 13555554421 123333333322 359999
Q ss_pred EEEecCC---CCccceeecCCC------CCCCCCEEEEEecCCC------------CCCceeEEEEeeec-------ccc
Q 019504 122 LKIEASE---DLLKPINVGQSS------FLKVGQQCLAIGNPFG------------FDHTLTVGVISGLN-------RDI 173 (340)
Q Consensus 122 L~v~~~~---~~~~~~~l~~~~------~~~~G~~v~~iG~p~g------------~~~~~~~G~vs~~~-------~~~ 173 (340)
|+++.+- ..+.|+.|+... .+..|..+++.|+... .........+.-+. ...
T Consensus 313 l~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~L~~~~v~i~~~~~~~~C~~~ 392 (497)
T 1rrk_A 313 IKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNGDKKGSCERD 392 (497)
T ss_dssp EEESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEEESSSCEEEEEEEEECSTTHHHHHHG
T ss_pred EEECCCCcCCCCeeeeeCCCCCccccccccCCCCchhcccccccCCccccceeeccCCCcceeeeEEEecCcccchhhhh
Confidence 9998763 356788885432 2345655544443110 11122222222111 000
Q ss_pred -cc--CCC-------ceecceEEEe-------eccCCCCccceeecC-CC--cEEEEEeeeee-CCC------CcCce--
Q 019504 174 -FS--QAG-------VTIGGGIQTD-------AAINPGNSGGPLLDS-KG--NLIGINTAIIT-QTG------TSAGV-- 224 (340)
Q Consensus 174 -~~--~~~-------~~~~~~i~~d-------~~i~~G~SGGPl~d~-~G--~VVGi~~~~~~-~~~------~~~~~-- 224 (340)
.. ... .....+|-.. ...|.|+|||||+-. +| .++||++++.. .++ ..+++
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~iCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~g~~~~C~~~~~~~~~P~~~r 472 (497)
T 1rrk_A 393 AQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISWGVVDVCKNQKRQKQVPAHAR 472 (497)
T ss_dssp GGGSTTCTTCSCGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEEEEEESCCCC--------CCTTCE
T ss_pred hhhcccccccccccccCCCCeEEeCCCCCCCCCcCCCCCCCCeeEEEeCCEEEEEEEEEecCCCCCCCccccCCCCCccc
Confidence 00 000 0011223221 357889999999843 34 49999999863 333 11221
Q ss_pred EEEEehHhHHHHHHHHHHcCce
Q 019504 225 GFAIPSSTVLKIVPQLIQYGKV 246 (340)
Q Consensus 225 ~~aip~~~i~~~l~~l~~~~~~ 246 (340)
+...-+...+.|+++.++...+
T Consensus 473 ~vyt~V~~~~~WI~~~~~~~~~ 494 (497)
T 1rrk_A 473 DFHINLFQVLPWLKEKLQDEDL 494 (497)
T ss_dssp EEEEEGGGGHHHHHHHTTTSSC
T ss_pred eeeeeHHHHHHHHHHHhCcccc
Confidence 2567788899999887765443
No 144
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.76 E-value=3.2e-09 Score=78.99 Aligned_cols=58 Identities=31% Similarity=0.232 Sum_probs=45.9
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++|| ++||+|++|||++|.+..+ ++.+...+.....+++|+|+
T Consensus 29 ~g~~V~~V~~~spA~~aGL-----------~~GD~I~~ing~~v~~~~~---~~~~~~~~~g~~v~l~v~R~ 86 (93)
T 2dls_A 29 RIVLVQSVRPGGAAMKAGV-----------KEGDRIIKVNGTMVTNSSH---LEVVKLIKSGAYVALTLLGS 86 (93)
T ss_dssp SSCEEEEECSSSTTTTTTC-----------CSSCEEEEETTEECSSSCH---HHHHHHHTSSSEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCCCH---HHHHHhhcCCCEEEEEEEEC
Confidence 5999999999999999999 9999999999999999875 22111112345578888885
No 145
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.75 E-value=2.3e-09 Score=84.26 Aligned_cols=59 Identities=27% Similarity=0.275 Sum_probs=50.6
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.+++||+++| | ++||+|++|||++|.+..| +..++.........|+|.|.+
T Consensus 48 ~gv~V~~V~~~spA~~aG~l-----------~~GD~I~~ing~~v~~~~~---~~~~l~~~~g~~v~l~v~R~g 107 (124)
T 1wh1_A 48 IGIYISEIDPNSIAAKDGRI-----------REGDRIIQINGIEVQNREE---AVALLTSEENKNFSLLIARPE 107 (124)
T ss_dssp CCEEEEEECSSSHHHHTCCC-----------CTTCEEEEESSCBCCSHHH---HHHHHTCSSCCSCCEEEEECS
T ss_pred CCEEEEEECCCCHHHHcCCC-----------CCCCEEEEECCEECCCHHH---HHHHHHhCCCCEEEEEEEECC
Confidence 699999999999999999 9 9999999999999999887 666665544456889999864
No 146
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.75 E-value=3.1e-09 Score=78.50 Aligned_cols=57 Identities=19% Similarity=0.202 Sum_probs=46.9
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++|| ++||+|++|||++|.+. .| +..++... ....+++++|.
T Consensus 28 ~gv~V~~V~~~spA~~aGl-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~~~-~~~v~l~v~r~ 86 (90)
T 2he4_A 28 PGQYIRSVDPGSPAARSGL-----------RAQDRLIEVNGQNVEGLRHAE---VVASIKAR-EDEARLLVVGP 86 (90)
T ss_dssp SSEEEEEECTTSHHHHHTC-----------CTTCEEEEETTEECTTSCHHH---HHHHHTTS-SSEEEEEEECC
T ss_pred CCEEEEEECCCChHHHCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHcC-CCcEEEEEEcc
Confidence 5999999999999999999 99999999999999998 54 44444433 34577888875
No 147
>1lvm_A Catalytic domain of the nuclear inclusion protein A (NIA); beta barrel, chymotrypsin-type cystein protease, enzyme- peptide complex; 1.80A {Tobacco etch virus} SCOP: b.47.1.3 PDB: 1lvb_A 1q31_A
Probab=98.74 E-value=2e-07 Score=79.37 Aligned_cols=176 Identities=13% Similarity=0.156 Sum_probs=108.6
Q ss_pred HHhCCCeEEEEeeeeccccccCCcccccCCceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEE
Q 019504 28 EKNTYSVVNIFDVTLRPTLNVTGLVEIPEGNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFE 107 (340)
Q Consensus 28 ~~~~~svV~I~~~~~~~~~~~~~~~~~~~~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~ 107 (340)
.-+...|+++........ ..--|+... + ||+|++|..+... ..+.++...|. ..++
T Consensus 20 n~Ia~~ic~l~n~sdg~~-----------~~l~gigyG-~-~iItn~HLf~~nn----------G~L~I~s~hG~-f~v~ 75 (229)
T 1lvm_A 20 NPISSTICHLTNESDGHT-----------TSLYGIGFG-P-FIITNKHLFRRNN----------GTLLVQSLHGV-FKVK 75 (229)
T ss_dssp HHHHTTEEEEEEEETTEE-----------EEEEEEEET-T-EEEECGGGGGCCS----------SEEEEEETTEE-EEES
T ss_pred ChhheEEEEEEeccCCce-----------EEEEEEeEC-C-EEEeChhhhccCC----------CcEEEEeCCCe-EEeC
Confidence 345667888864221111 113466665 3 9999999999865 37888888774 1111
Q ss_pred E---EEEEeCCCCcEEEEEEecCCCCccceee-cCCCCCCCCCEEEEEecCCCCCCceeEEEEeeeccccccCCCceecc
Q 019504 108 G---KLVGADRAKDLAVLKIEASEDLLKPINV-GQSSFLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQAGVTIGG 183 (340)
Q Consensus 108 a---~v~~~d~~~DlAlL~v~~~~~~~~~~~l-~~~~~~~~G~~v~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~ 183 (340)
- --+..=+..||.++|++.. +||.+- .....++.+|+|.++|.-+.. ......||........... .
T Consensus 76 nt~~lki~~i~g~DiiiIrmPkD---fpPf~~~l~FR~P~~~e~V~lVg~~fq~--k~~~s~vSesS~i~p~~~~----~ 146 (229)
T 1lvm_A 76 NTTTLQQHLIDGRDMIIIRMPKD---FPPFPQKLKFREPQREERICLVTTNFQT--KSMSSMVSDTSCTFPSSDG----I 146 (229)
T ss_dssp CGGGSEEEECTTSSCEEEECCTT---SCCCCSCCCBCCCCTTCEEEEEEEECSS--SSCEEEECCCEECEEETTT----T
T ss_pred CCCceeeEEeCCccEEEEeCCCc---CCCcccccccCCCCCCCeEEEEEeEeec--CCccEEECCcceeEecCCC----C
Confidence 0 1234456789999999875 233321 123567899999999965442 2233344433222222222 2
Q ss_pred eEEEeeccCCCCccceeecC-CCcEEEEEeeeeeCCCCcCceEEEEehHh-HHHHHHHH
Q 019504 184 GIQTDAAINPGNSGGPLLDS-KGNLIGINTAIITQTGTSAGVGFAIPSST-VLKIVPQL 240 (340)
Q Consensus 184 ~i~~d~~i~~G~SGGPl~d~-~G~VVGi~~~~~~~~~~~~~~~~aip~~~-i~~~l~~l 240 (340)
+..+=.....|+=|.|+++. +|++|||++..... ...||+.|+.. +.++|+..
T Consensus 147 fWkHwIsT~~G~CGlPlVs~~Dg~IVGiHsl~~~~----~~~NyF~~f~~~f~~~L~~~ 201 (229)
T 1lvm_A 147 FWKHWIQTKDGQCGSPLVSTRDGFIVGIHSASNFT----NTNNYFTSVPKNFMELLTNQ 201 (229)
T ss_dssp EEEECBCCCTTCTTCEEEETTTCCEEEEEEEEETT----SCSEEEEECCTTHHHHHHCG
T ss_pred EeEEEeeCCCCcCCCcEEECCCCcEEEEEcccccC----CCeEEEeCCCHHHHHHHhcc
Confidence 34555666779999999987 89999999987643 33578877733 44666654
No 148
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.74 E-value=2.2e-09 Score=79.46 Aligned_cols=60 Identities=22% Similarity=0.176 Sum_probs=47.4
Q ss_pred CCCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 267 GNGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 267 ~~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
+..++|.+|.++|||+++|| ++||+|++|||+++.+..| +..++........++++.|++
T Consensus 3 ~~~~~V~~v~~~spA~~aGl-----------~~GD~I~~ing~~v~~~~~---~~~~l~~~~g~~v~l~v~R~g 62 (91)
T 2zpm_A 3 PIEPVLENVQPNSAASXAGL-----------QAGDRIVXVDGQPLTQWVT---FVMLVRDNPGXSLALEIERQG 62 (91)
T ss_dssp ---CBCSEECTTSHHHHTTC-----------CTTCEEEEETTEECCCHHH---HHHHHHHCTTCCEEEEEEETT
T ss_pred CcCeEEEEECCCChHHhcCC-----------CCCCEEEEECCeEcCCHHH---HHHHHhcCCCCeEEEEEEECC
Confidence 34578999999999999999 9999999999999999987 555555444445788888864
No 149
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.73 E-value=1.7e-09 Score=80.17 Aligned_cols=57 Identities=19% Similarity=0.103 Sum_probs=45.5
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEcc--CCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVS--FSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~--~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++|| ++||+|++|||++|. +..| +..++... ....+++|.|.
T Consensus 27 ~g~~V~~V~~~spA~~aGl-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~~~-g~~v~l~v~r~ 85 (91)
T 2vsp_A 27 PGSFIKEVQKGGPADLAGL-----------EDEDVIIEVNGVNVLDEPYEK---VVDRIQSS-GKNVTLLVCGK 85 (91)
T ss_dssp SCCBC-CCCTTSHHHHTTC-----------CTTCEEEEETTEECTTSCHHH---HHHHHTTS-CSEEEEEEEC-
T ss_pred CCeEEEEECCCChHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHcC-CCEEEEEEEeC
Confidence 5899999999999999999 999999999999999 6665 44445443 45578888875
No 150
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.73 E-value=2.6e-09 Score=79.82 Aligned_cols=57 Identities=23% Similarity=0.170 Sum_probs=47.2
Q ss_pred cEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCC-CCceEEEEeCC
Q 019504 270 ALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEP-NQDHLTCLKSS 340 (340)
Q Consensus 270 ~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~ 340 (340)
-+|.+|.++|||+++|| ++||+|++|||++|.+..| +...+....+ ...++++.|++
T Consensus 4 p~V~~V~~~spA~~aGl-----------~~GD~I~~ing~~v~~~~d---~~~~l~~~~~~~~v~l~v~R~g 61 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQI-----------APGTELKAVDGIETPDWDA---VRLQLVDKIGDESTTITVAPFG 61 (95)
T ss_dssp CBEEEECTTSHHHHTTC-----------CTTCEEEEETTEECSSHHH---HHHHHHHTTTCSEEEEEEECTT
T ss_pred CEEEeeCCCCHHHHcCC-----------CCCCEEEEECCEECCCHHH---HHHHHHHhcCCCcEEEEEEECC
Confidence 36889999999999999 9999999999999999998 6666655443 45778888863
No 151
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.73 E-value=1.9e-09 Score=80.37 Aligned_cols=58 Identities=24% Similarity=0.214 Sum_probs=48.5
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||+++|| ++||+|++|||++|.+. .| +..++.... ...+++|.|++
T Consensus 30 ~g~~V~~V~~~spA~~aGL-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~~~~-~~v~l~v~R~g 89 (94)
T 1vb7_A 30 TPIIVTKVTERGKAEAADL-----------RPGDIIVAINGQSAENMLHAE---AQSKIRQSA-SPLRLQLDRSS 89 (94)
T ss_dssp EEEECCCBCTTSSHHHHTC-----------CTTCEEEEETTEECTTCCHHH---HHHHHHTCC-SSEEEEEECCC
T ss_pred CCeEEEEECCCCHHHHCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHhCC-CcEEEEEEECC
Confidence 5899999999999999999 99999999999999998 55 444444443 56889999864
No 152
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.73 E-value=1.7e-09 Score=80.67 Aligned_cols=59 Identities=24% Similarity=0.298 Sum_probs=49.4
Q ss_pred CCCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEee-CCCCceEEEEeCC
Q 019504 267 GNGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICA-EPNQDHLTCLKSS 340 (340)
Q Consensus 267 ~~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~-~~~~~~~~~~~~~ 340 (340)
..|++|.+|.++|||++ || ++||+|++|||++|.+..| +..++... .....+++|+|++
T Consensus 4 ~~Gv~V~~V~~~spA~~-GL-----------~~GD~Il~InG~~v~~~~~---l~~~l~~~~~g~~v~l~v~R~g 63 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-RL-----------EAGDRIAAIDGQPINTSEQ---IVSYVREKQAGDRVRVTFIRDR 63 (94)
T ss_dssp CCCEECCCCCTTSTTBT-TB-----------CTTCEEEEETTBCCCCHHH---HHHHHHHSCTTCCEEEEEEETT
T ss_pred CCcEEEEEECCCChHHh-CC-----------CCCCEEEEECCEECCCHHH---HHHHHHhCCCCCEEEEEEEECC
Confidence 47999999999999998 99 9999999999999999887 56566554 3456788888864
No 153
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.73 E-value=4.3e-09 Score=78.84 Aligned_cols=78 Identities=18% Similarity=0.217 Sum_probs=54.7
Q ss_pred eeeeEEeccHHHH-hhcCCCCCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEe-
Q 019504 249 AGLNVDIAPDLVA-SQLNVGNGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLIC- 326 (340)
Q Consensus 249 ~~lg~~~~~~~~~-~~~~~~~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~- 326 (340)
.+||+.+...... ...+...|++|.+|.++|||+++|| ++||+|++|||++|.+..+ +......
T Consensus 14 ~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGl-----------~~GD~I~~ing~~v~~~~~---~~~~~~~~ 79 (97)
T 2w4f_A 14 GGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGV-----------RVGDKLLEVNGVALQGAEH---HEAVEALR 79 (97)
T ss_dssp TBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHTC-----------CTTCEEEEETTEECTTCCH---HHHHHHHH
T ss_pred CceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcCC-----------CCCCEEEEECCEECCCcCH---HHHHHHHh
Confidence 4677766421100 0112347999999999999999999 9999999999999999886 3332222
Q ss_pred eCCCCceEEEEeCC
Q 019504 327 AEPNQDHLTCLKSS 340 (340)
Q Consensus 327 ~~~~~~~~~~~~~~ 340 (340)
......+++|.|++
T Consensus 80 ~~g~~v~l~v~R~g 93 (97)
T 2w4f_A 80 GAGTAVQMRVWRER 93 (97)
T ss_dssp TSCSEEEEEEECCS
T ss_pred CCCCeEEEEEEeCC
Confidence 24455788888864
No 154
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.72 E-value=3e-09 Score=80.26 Aligned_cols=58 Identities=17% Similarity=0.206 Sum_probs=48.6
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEee-CCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICA-EPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~-~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||++ || ++||+|++|||++|.+..| +..++... .....++++.|++
T Consensus 7 ~Gv~V~~V~~~spA~~-GL-----------~~GD~I~~Ing~~v~~~~d---l~~~l~~~~~g~~v~l~v~R~g 65 (100)
T 3i18_A 7 DGVYVMSVKDDVPAAD-VL-----------HAGDLITEIDGNAFKSSQE---FIDYIHSKKVGDTVKINYKHGD 65 (100)
T ss_dssp CCEEEEEECTTSGGGG-TC-----------CTTCEEEEETTBCCSSHHH---HHHHHHTSCTTCEEEEEEEETT
T ss_pred CCEEEEEeCCCCchHH-CC-----------CCCCEEEEECCEECCCHHH---HHHHHHhCCCCCEEEEEEEECC
Confidence 7999999999999995 99 9999999999999999988 66666653 3445788888864
No 155
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.72 E-value=1.9e-09 Score=82.46 Aligned_cols=59 Identities=24% Similarity=0.109 Sum_probs=46.5
Q ss_pred CCCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 267 GNGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 267 ~~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
..|++|.+|.++|||+++| | ++||+|++|||++|.+. .+ +..++.. .....+++|.|.+
T Consensus 43 ~~gv~V~~V~~~spA~~aG~l-----------~~GD~I~~vng~~v~~~~~~~---~~~~l~~-~g~~v~l~v~R~~ 104 (108)
T 2jre_A 43 ATGIYVKSLIPGSAAALDGRI-----------EPNDKILRVDDVNVQGMAQSD---VVEVLRN-AGNPVRLLLIRRL 104 (108)
T ss_dssp CCCCEEEEECTTSHHHHHSSC-----------CSSEEEEEETTEECTTSCHHH---HHHHHHH-HCSEEEEEEEECC
T ss_pred CCCEEEEEeCCCCHHHHcCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHc-CCCeEEEEEEeCC
Confidence 4699999999999999999 8 99999999999999985 33 3333333 3345788888863
No 156
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.71 E-value=4.4e-09 Score=77.29 Aligned_cols=58 Identities=12% Similarity=0.135 Sum_probs=46.0
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCC--CCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSC--LSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~--d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.+++|.+|.++|||+++|| ++||+|++|||+++.+.. + +...+... ....+++|.|.+
T Consensus 27 ~~~~V~~V~~~spA~~aGl-----------~~GD~I~~ing~~v~~~~~~~---~~~~~~~~-g~~v~l~v~R~g 86 (88)
T 2uzc_A 27 MPLTISSLKDGGKAAQANV-----------RIGDVVLSIDGINAQGMTHLE---AQNKIKGC-TGSLNMTLQRES 86 (88)
T ss_dssp EEEEEEEECTTSHHHHTTC-----------CTTCEEEEETTEECTTCCHHH---HHHHHHTC-CSEEEEEEECCC
T ss_pred CCeEEEEECCCChHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHhC-CCeEEEEEEeCC
Confidence 5899999999999999999 999999999999999983 3 33333322 345688888864
No 157
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.71 E-value=1.8e-09 Score=79.29 Aligned_cols=59 Identities=20% Similarity=0.147 Sum_probs=48.1
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEee-CCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICA-EPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~-~~~~~~~~~~~~~ 340 (340)
.|+.|..+.++|||+++|| ++||+|++|||++|.+..| +..++... .....++++.|++
T Consensus 19 ~G~~V~~~~~~s~A~~aGl-----------~~GD~I~~ing~~v~~~~d---~~~~~~~~~~g~~v~l~v~R~g 78 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIGL-----------QDGDMAVALNGLDLTDPNV---MNTLFQSMNEMTEMSLTVERDG 78 (87)
T ss_dssp EEEEEEECSCHHHHHHTTC-----------CTTCEEEEETTEETTCHHH---HHHHHHTGGGCSEEEEEEEETT
T ss_pred EEEEEEeCCCCCHHHHCCC-----------CCCCEEEEECCEECCCHHH---HHHHHHhcCCCCEEEEEEEECC
Confidence 5889999999999999999 9999999999999999988 55555433 3345688888864
No 158
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.70 E-value=4.6e-09 Score=79.35 Aligned_cols=59 Identities=25% Similarity=0.269 Sum_probs=46.9
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.+++||+++|| ++||+|++|||++|.+..+ .......+.....+++|+|.+
T Consensus 35 ~g~~V~~V~~~spA~~aGL-----------~~GD~I~~ing~~v~~~~~---~~~~~~~~~~~~v~l~v~R~g 93 (101)
T 1uez_A 35 VGIYVSLVEPGSLAEKEGL-----------RVGDQILRVNDKSLARVTH---AEAVKALKGSKKLVLSVYSAG 93 (101)
T ss_dssp CCEEEEEECTTSHHHHHTC-----------CSSCCEEEETTEECSSCCH---HHHHHHSSSSSSCCEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCcCH---HHHHHhhcCCCeEEEEEEECC
Confidence 6999999999999999999 9999999999999999876 222221223345789988863
No 159
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.70 E-value=6.6e-09 Score=79.19 Aligned_cols=57 Identities=25% Similarity=0.243 Sum_probs=47.0
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCC--CCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSC--LSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~--d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|..|.++|||+++|| ++||+|++|||++|.+.. + +..++. ......++++.|.
T Consensus 26 ~g~~V~~V~~~spA~~aGl-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~-~~g~~v~l~v~r~ 84 (106)
T 3ngh_A 26 DGHLIRVIEEGSPAEKAGL-----------LDGDRVLRINGVFVDKEEHAQ---VVELVR-KSGNSVTLLVLDG 84 (106)
T ss_dssp CSCEEECCCTTSHHHHTTC-----------CTTCEEEEETTEECTTSCHHH---HHHHHH-HTTTEEEEEEECH
T ss_pred CCEEEEEeCCCCHHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHH-hCCCEEEEEEEEC
Confidence 5899999999999999999 999999999999999987 4 444444 3445577888774
No 160
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.69 E-value=3.6e-09 Score=79.10 Aligned_cols=58 Identities=24% Similarity=0.185 Sum_probs=46.6
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||+++|| ++||+|++|||++|.+. .| +..++... ....++++.|.+
T Consensus 30 ~g~~V~~V~~~spA~~aGl-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~~~-g~~v~l~v~r~~ 89 (96)
T 2v90_A 30 PGQFLWEVDPGLPAKKAGM-----------QAGDRLVAVAGESVEGLGHEE---TVSRIQGQ-GSCVSLTVVDPE 89 (96)
T ss_dssp EEEEEEEECTTSHHHHTTC-----------CTTEEEEEETTEECTTCCHHH---HHHHHHTT-TTEEEEEEECCC
T ss_pred CCeEEEEECCCChHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHcC-CCEEEEEEECCC
Confidence 5899999999999999999 99999999999999984 44 44444433 455778888763
No 161
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.69 E-value=4.7e-09 Score=78.77 Aligned_cols=60 Identities=20% Similarity=0.139 Sum_probs=47.2
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||+++| | ++||+|++|||++|.+... ..+..++.. .....+++|.|.+
T Consensus 37 ~g~~V~~V~~~spA~~aG~L-----------~~GD~I~~ing~~v~~~~~-~~~~~~l~~-~g~~v~l~v~R~g 97 (98)
T 1ihj_A 37 TGIFIKGIVPDSPAHLCGRL-----------KVGDRILSLNGKDVRNSTE-QAVIDLIKE-ADFKIELEIQTFD 97 (98)
T ss_dssp EEEEEEEECTTSHHHHHCSC-----------CTTCEEEEETTEECTTCCH-HHHHHHHHH-SCSEEEEEEEEC-
T ss_pred CCEEEEEECCCCHHHHcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHhc-CCCeEEEEEEeCC
Confidence 599999999999999999 8 9999999999999999732 114444433 4456889998864
No 162
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.69 E-value=4.9e-09 Score=78.44 Aligned_cols=60 Identities=27% Similarity=0.143 Sum_probs=49.0
Q ss_pred CCCCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 266 VGNGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 266 ~~~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
...|++|.+|.++|||+++|| ++||+|++|||++|.+. .| +..++... ++..+++|++.+
T Consensus 35 ~~~~~~V~~V~~~spA~~aGL-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~~~-~~~v~l~v~~~~ 96 (96)
T 2ego_A 35 VEMVTFVARVHESSPAQLAGL-----------TPGDTIASVNGLNVEGIRHRE---IVDIIKAS-GNVLRLETLYGT 96 (96)
T ss_dssp CCEEEEEEEECTTCHHHHTTC-----------CTTCEEEEETTEECTTCCHHH---HHHHHHHT-TTEEEEEEECCC
T ss_pred CCCCeEEEEECCCChHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHhC-CCeEEEEEEECc
Confidence 346999999999999999999 99999999999999995 55 44445444 456888888764
No 163
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.68 E-value=5e-09 Score=78.43 Aligned_cols=58 Identities=12% Similarity=0.108 Sum_probs=45.2
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCcee-EEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRI-YLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~-~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | ++||+|++|||++|.+..+ ... .+.....+...++|.|.
T Consensus 31 ~gv~V~~V~~~spA~~aG~L-----------~~GD~I~~Ing~~v~~~~~---~~~~~~~~~~~~~v~l~v~R~ 90 (96)
T 2qkv_A 31 IGCTIADLIQGQYPEIDSKL-----------QRGDIITKFNGDALEGLPF---QVSYALFKGANGKVSMEVTRP 90 (96)
T ss_dssp SSEEEEEECTTSCHHHHHHC-----------CTTCEEEEETTEECTTCCH---HHHHHHHHTCSSEEEEEEECC
T ss_pred CcEEEEEeCCCChHHhcCCC-----------CCCCEEEEECCEECCCCCH---HHHHHHHhcCCCcEEEEEEeC
Confidence 699999999999999999 8 9999999999999998654 221 22222334578888874
No 164
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.67 E-value=8.2e-09 Score=79.22 Aligned_cols=60 Identities=18% Similarity=0.241 Sum_probs=47.9
Q ss_pred CCCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEe-eCCCCceEEEEeCC
Q 019504 267 GNGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLIC-AEPNQDHLTCLKSS 340 (340)
Q Consensus 267 ~~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~-~~~~~~~~~~~~~~ 340 (340)
..|++|.+|.++|||+++|| ++||+|++|||++|.+..+ +...... ......+++|.|++
T Consensus 45 ~~g~~V~~V~~~spA~~aGL-----------~~GD~I~~ing~~v~~~~~---~~~~~~~~~~g~~v~l~v~R~g 105 (110)
T 1x5q_A 45 DEGIFISRVSEEGPAARAGV-----------RVGDKLLEVNGVALQGAEH---HEAVEALRGAGTAVQMRVWRES 105 (110)
T ss_dssp CCSEEEEEECTTSHHHHHTC-----------CTTCEEEEETTEECTTCCH---HHHHHHHHSCCSEEEEEEEECS
T ss_pred CCCEEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCcCH---HHHHHHhhCCCCeEEEEEEECC
Confidence 37999999999999999999 9999999999999999875 3322222 24455788888864
No 165
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.67 E-value=4e-09 Score=79.03 Aligned_cols=58 Identities=14% Similarity=0.171 Sum_probs=46.9
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccC--CCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSF--SCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~--~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||+++| | ++||+|++|||++|.+ .+| +..++... .+..+++|++++
T Consensus 36 ~gv~V~~V~~gspA~~aG~L-----------~~GD~Il~ING~~v~~~~~~~---~~~~l~~~-~~~v~L~V~~~~ 96 (97)
T 2ejy_A 36 QSCTVARILHGGMIHRQGSL-----------HVGDEILEINGTNVTNHSVDQ---LQKAMKET-KGMISLKVIPNQ 96 (97)
T ss_dssp CCEEEEEECSSSHHHHHTCC-----------CTTCEEEEETTBCCCSSCSHH---HHHHHHHC-CEEEEEEEECCC
T ss_pred CCEEEEEeCCCCHHHHcCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHcC-CCeEEEEEEECC
Confidence 599999999999999999 8 9999999999999996 565 55555443 345778877653
No 166
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.67 E-value=5.1e-09 Score=78.41 Aligned_cols=57 Identities=16% Similarity=0.078 Sum_probs=47.1
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccC--CCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSF--SCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~--~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | ++||+|++|||+++.+ ..| +..++.. .....+++|.|.
T Consensus 32 ~~~~V~~V~~~spA~~aG~l-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~~-~g~~v~l~v~R~ 91 (97)
T 2jil_A 32 RPVVITSVRPGGPADREGTI-----------KPGDRLLSVDGIRLLGTTHAE---AMSILKQ-CGQEAALLIEYD 91 (97)
T ss_dssp EEEEEEEECTTSHHHHHCCC-----------CTTCEEEEETTEECSSCCHHH---HHHHHHH-SCSEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHCCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHc-CCCeEEEEEEeC
Confidence 699999999999999999 8 9999999999999999 555 4444444 445578888885
No 167
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.66 E-value=7.8e-09 Score=75.36 Aligned_cols=60 Identities=18% Similarity=0.168 Sum_probs=45.6
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||+++|| ++||+|++|||+++.+... ......+.. .....++++.|.+
T Consensus 25 ~~v~V~~V~~~spA~~aGl-----------~~GD~I~~vng~~v~~~~~-~~~~~~~~~-~~~~v~l~v~R~~ 84 (85)
T 1rgw_A 25 MPLTISRITPGSKAAQSQL-----------SQGDLVVAIDGVNTDTMTH-LEAQNKIKS-ASYNLSLTLQKSK 84 (85)
T ss_dssp SCCBEEEECTTSHHHHSSC-----------CCCSBEEEETTEECTTCCH-HHHHHHHTT-CSSCEEEEEESCC
T ss_pred CCeEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCcCH-HHHHHHHHc-CCCeEEEEEEeCC
Confidence 5899999999999999999 9999999999999998831 112222222 2344788888863
No 168
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.65 E-value=1.2e-08 Score=79.96 Aligned_cols=76 Identities=21% Similarity=0.139 Sum_probs=53.3
Q ss_pred eeeeEEecc--HHHHhh--cCCCCCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccC--CCCCCCce
Q 019504 249 AGLNVDIAP--DLVASQ--LNVGNGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSF--SCLSIPSR 321 (340)
Q Consensus 249 ~~lg~~~~~--~~~~~~--~~~~~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~--~~d~~~~~ 321 (340)
.+||+.+.. ....+. .....|++|.+|.++|||+++| | ++||+|++|||++|.+ ..| +.
T Consensus 36 ~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L-----------~~GD~Il~Vng~~v~~~~~~~---~~ 101 (123)
T 2iwq_A 36 KSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTL-----------KPGDRIVEVDGMDLRDASHEQ---AV 101 (123)
T ss_dssp SCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCC-----------CTTCEEEEETTEECTTCCHHH---HH
T ss_pred CCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCC-----------CCCCEEEEECCEECCCCCHHH---HH
Confidence 466766532 222221 2234799999999999999999 9 9999999999999998 555 44
Q ss_pred eEEEeeCCCCceEEEEeC
Q 019504 322 IYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~ 339 (340)
.++... ++..+++|.|.
T Consensus 102 ~~l~~~-~~~v~l~v~r~ 118 (123)
T 2iwq_A 102 EAIRKA-GNPVVFMVQSI 118 (123)
T ss_dssp HHHHHC-CSSEEEEEECC
T ss_pred HHHHcC-CCeEEEEEEEC
Confidence 444433 34688888875
No 169
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.65 E-value=8.4e-09 Score=78.99 Aligned_cols=58 Identities=16% Similarity=0.058 Sum_probs=45.8
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.+++|.+|.++|||+++|| ++||+|++|||++|.+. .| +..++........+++|+|.
T Consensus 44 ~~v~V~~V~~gspA~~AGL-----------~~GD~Il~VnG~~v~~~~~~d---v~~~i~~~~~~~v~l~V~~~ 103 (109)
T 2vsv_A 44 APVQVHFLDPYCSASVAGA-----------REGDYIVSIQLVDCKWLTLSE---VMKLLKSFGEDEIEMKVVSL 103 (109)
T ss_dssp SSCEEEEECTTSHHHHTTC-----------CTTCEEEEETTEECTTCCHHH---HHHHHHTTTTSCEEEEEESC
T ss_pred CCeEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHhCCCCeEEEEEEEC
Confidence 5789999999999999999 99999999999999944 65 44444333322378888874
No 170
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.65 E-value=1e-08 Score=80.54 Aligned_cols=58 Identities=28% Similarity=0.282 Sum_probs=47.2
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEe-eCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLIC-AEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~-~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++|| ++||+|++|||++|.+. .| +...+.. ......+++|.|.
T Consensus 51 ~gv~V~~V~~gspA~~aGL-----------~~GD~Il~Vng~~v~~~~~~~---~~~~l~~~~~g~~v~l~v~R~ 111 (124)
T 3tsv_A 51 VGIFVAGVLEDSPAAKEGL-----------EEGDQILRVNNVDFTNIIREE---AVLFLLDLPKGEEVTILAQKK 111 (124)
T ss_dssp SCEEEEEECTTCHHHHTTC-----------CTTEEEEEETTEECSSCCHHH---HHHHHHHSCTTCEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHhcCCCCEEEEEEEEC
Confidence 6999999999999999999 99999999999999998 55 4444443 3444577788775
No 171
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=98.65 E-value=6.6e-08 Score=94.05 Aligned_cols=177 Identities=16% Similarity=0.180 Sum_probs=91.7
Q ss_pred CceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCc---eeEEEEEEEEeCC----------------CC
Q 019504 57 GNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGV---QKNFEGKLVGADR----------------AK 117 (340)
Q Consensus 57 ~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~---~~~~~a~v~~~d~----------------~~ 117 (340)
....|.+|+++ ||||+|||+...... ..+.|.+.... ...+..+-+..++ .+
T Consensus 247 ~~CgGsLIs~~-~VLTAAHC~~~~~~~--------~~~~V~~G~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~n 317 (509)
T 2odp_A 247 ETCRGALISDQ-WVLTAAHCFRDGNDH--------SLWRVNVGDPKSQWGKEFLIEKAVISPGFDVFAKKNQGILEFYGD 317 (509)
T ss_dssp -CEEEEECSSS-EEEECGGGC----------------CEEEECCTTCTTCEEECEEEEEECTTCCTTTTGGGTCCCCCTT
T ss_pred cEEEEEEEcCC-EEEEcHHHcCCCCCc--------ceEEEEeCCcccCCCceeeeEEEEECCCCccccccccccccccCC
Confidence 35899999987 999999999753110 13444443211 1233333333332 36
Q ss_pred cEEEEEEecCC---CCccceeecCCC------CCCCCCEEEEEecCCCCCC------------ceeEEEEeeec----cc
Q 019504 118 DLAVLKIEASE---DLLKPINVGQSS------FLKVGQQCLAIGNPFGFDH------------TLTVGVISGLN----RD 172 (340)
Q Consensus 118 DlAlL~v~~~~---~~~~~~~l~~~~------~~~~G~~v~~iG~p~g~~~------------~~~~G~vs~~~----~~ 172 (340)
|||||+++.+- ..+.|+.|+... ....|..+.+.|+...... .+..-++..+. ..
T Consensus 318 DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~ 397 (509)
T 2odp_A 318 DIALLKLAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQSVPAHFVALNGSKLNINLKMGVEWTSCAE 397 (509)
T ss_dssp CCEEEEESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEECTTSCEEEEEEECTHHHHHHHH
T ss_pred CeEEEEECCcccCCCCcccccCCCCcccchhhccCCCCccccccccccccccceeeeecccCceeeEEEecCccHHHHHH
Confidence 99999998763 346778885322 1245666655554211111 11111111000 01
Q ss_pred c-------ccC----CCceecceEEE----eeccCCCCccceeecC-CC--cEEEEEeeeee-CCCC-----------cC
Q 019504 173 I-------FSQ----AGVTIGGGIQT----DAAINPGNSGGPLLDS-KG--NLIGINTAIIT-QTGT-----------SA 222 (340)
Q Consensus 173 ~-------~~~----~~~~~~~~i~~----d~~i~~G~SGGPl~d~-~G--~VVGi~~~~~~-~~~~-----------~~ 222 (340)
. +.. .......+|-. ....|.|+|||||+-. +| .++||++++.. .|+. .+
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~iCag~~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~G~~~~C~~~~~~~~~~~~~~P 477 (509)
T 2odp_A 398 VVSQEKTMFPNLTDVREVVTDQFLCSGTQEDESPCKGESGGAVFLERRFRFFQVGLVSWGLYNPCLGSADKNSRKRAPRS 477 (509)
T ss_dssp GGGGCTTTCTTCSSGGGTSCTTEEEECCTTCCCCCGGGTTCEEEEEETTEEEEEEEEEEESCCTTC-----CCCCCCCTT
T ss_pred HhhcccccccccccccccccCCEEEeCCCCCCcccCCCccCceEEEECCeEEEEEEEEEcCCCCCCCcccccccccCccc
Confidence 0 000 00001122322 2357889999999953 23 49999999863 3431 12
Q ss_pred ce----EEEEehHhHHHHHHHHHH
Q 019504 223 GV----GFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 223 ~~----~~aip~~~i~~~l~~l~~ 242 (340)
+. .+..-+...++|+++.++
T Consensus 478 g~~y~~~vyt~V~~~~~WI~~~~~ 501 (509)
T 2odp_A 478 KVPPPRDFHINLFRMQPWLRQHLG 501 (509)
T ss_dssp CSSCCCEEEEEGGGCHHHHHHHHT
T ss_pred CCCCCCceeeeHHHHhHHHHHHhC
Confidence 21 467788889999988765
No 172
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.65 E-value=2.2e-09 Score=80.59 Aligned_cols=58 Identities=19% Similarity=0.105 Sum_probs=44.4
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccC--CCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSF--SCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~--~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++|| ++||+|++|||++|.+ ..| +..++.........+++.|.
T Consensus 33 ~g~~V~~V~~~spA~~aGl-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~~~~~~~~~l~v~R~ 92 (98)
T 2jxo_A 33 PGQFIRSVDPDSPAEASGL-----------RAQDRIVEVNGVCMEGKQHGD---VVSAIRAGGDETKLLVVDRE 92 (98)
T ss_dssp SCEEEEEECTTSHHHHHTC-----------CTTCEEEEETTEECTTCCHHH---HHHHHHTTTTEEEEEECCHH
T ss_pred CCEEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHhCCCcEEEEEEECC
Confidence 5999999999999999999 9999999999999998 565 44444443222234566553
No 173
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.64 E-value=7e-09 Score=79.41 Aligned_cols=58 Identities=24% Similarity=0.190 Sum_probs=47.9
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEee--CCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLICA--EPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~~--~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | ++||+|++|||+++.+. .| +..++... .++..+++|.|.
T Consensus 33 ~gv~V~~V~~~spA~~aG~L-----------~~GD~Il~Vng~~v~~~~~~~---~~~~l~~~~~~~~~v~l~v~R~ 95 (108)
T 3cbz_A 33 GGIYIGSIMKGGAVAADGRI-----------EPGDMLLQVNDMNFENMSNDD---AVRVLRDIVHKPGPIVLTVAKS 95 (108)
T ss_dssp CEEEEEEECTTSHHHHHCCC-----------CTTCEEEEETTEETTSCCHHH---HHHHHHHHHTSSSCEEEEEECC
T ss_pred CCEEEEEECCCChHHhcCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHhcccCCCeEEEEEEeC
Confidence 699999999999999999 8 99999999999999984 44 44455544 345688998885
No 174
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.64 E-value=3.3e-09 Score=78.06 Aligned_cols=57 Identities=23% Similarity=0.281 Sum_probs=43.7
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEcc--CCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVS--FSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~--~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | +.||+|++|||+++. +.+| ...++.. .++..++++.+.
T Consensus 21 ~gv~V~~V~~gspA~~aG~L-----------~~GD~Il~ing~~v~~~~~~~---~~~~i~~-~~~~v~L~v~~~ 80 (88)
T 3e17_A 21 SQIFVKEMTRTGLATKDGNL-----------HEGDIILKINGTVTENMSLTD---ARKLIEK-SRGKLQLVVLRD 80 (88)
T ss_dssp EEEEEEEECTTSHHHHHCCC-----------CTTCEEEEETTEECTTCCHHH---HHHHHHH-TTTEEEEEECCC
T ss_pred CCEEEEEECCCCHHHHcCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHc-CCCeEEEEEeCC
Confidence 599999999999999999 8 999999999999994 4444 3344433 334577776553
No 175
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.64 E-value=3.4e-09 Score=83.86 Aligned_cols=60 Identities=27% Similarity=0.178 Sum_probs=48.1
Q ss_pred CCCCCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccC--CCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 265 NVGNGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSF--SCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 265 ~~~~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~--~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
+...|++|.+|.+++||+++| | ++||+|++|||++|.+ ..| +..++.. ......++|.|.
T Consensus 43 ~~~~gv~V~~V~~~spA~~aG~L-----------~~GD~I~~vng~~v~~~~~~~---~~~~l~~-~~~~v~l~v~R~ 105 (129)
T 2dmz_A 43 GEASGIYVKSVIPGSAAYHNGHI-----------QVNDKIVAVDGVNIQGFANHD---VVEVLRN-AGQVVHLTLVRR 105 (129)
T ss_dssp CCCCEEEEEEECTTSHHHHHTCC-----------CSSCBEEEETTBCCTTCCHHH---HHHHHHH-CCSSEEEEEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHcCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHc-CCCeEEEEEEeC
Confidence 344799999999999999999 8 9999999999999998 554 4444444 445577888875
No 176
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.64 E-value=6.5e-09 Score=75.47 Aligned_cols=58 Identities=21% Similarity=0.057 Sum_probs=46.4
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||+++|| ++||+|++|||+++.+. .| +..++.. .....+++|.|++
T Consensus 23 ~~~~V~~V~~~spA~~aGl-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~~-~~~~v~l~v~R~~ 82 (83)
T 2kv8_A 23 APCVLSCVMRGSPADFVGL-----------RAGDQILAVNEINVKKASHED---VVKLIGK-CSGVLHMVIAEGV 82 (83)
T ss_dssp SSCBCCBCCTTSTTTTTTC-----------CTTCEEEEETTEECSSCCHHH---HHHHHTT-CSSCEEEEEECCC
T ss_pred CCeEEEEeCCCChHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHh-CCCeEEEEEEcCC
Confidence 5899999999999999999 99999999999999998 44 3333322 2344788888863
No 177
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.63 E-value=7.9e-09 Score=77.69 Aligned_cols=57 Identities=25% Similarity=0.192 Sum_probs=45.2
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccC--CCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSF--SCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~--~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++|| ++||+|++|||+++.+ ..| +..++. ......++++.|.
T Consensus 34 ~g~~V~~V~~~spA~~aGl-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~-~~g~~v~l~v~r~ 92 (99)
T 3khf_A 34 VHHVVWSVEDGSPAQEAGL-----------RAGDLITHINGESVLGLVHMD---VVELLL-KSGNKISLRTTAL 92 (99)
T ss_dssp EEEEEEEECTTSHHHHHTC-----------CTTCEEEEETTEECTTCCHHH---HHHHHH-HSCSEEEEEEECS
T ss_pred CCeEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHh-cCCCEEEEEEEEC
Confidence 3789999999999999999 9999999999999994 443 333443 3445678888875
No 178
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.62 E-value=1.2e-08 Score=75.37 Aligned_cols=59 Identities=14% Similarity=0.033 Sum_probs=45.2
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++|| ++||+|++|||+++.+..+ ......+. ......++++.|+
T Consensus 32 ~gv~V~~V~~~spA~~aGl-----------~~GD~I~~vng~~v~~~~~-~~~~~~~~-~~g~~v~l~v~R~ 90 (91)
T 1m5z_A 32 KGVYVKNIRPAGPGDLGGL-----------KPYDRLLQVNHVRTRDFDC-CLVVPLIA-ESGNKLDLVISRN 90 (91)
T ss_dssp SCEEEEEECTTSHHHHHTC-----------CTTCEEEEETTEECTTCCH-HHHHHHHH-TSTTEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHH-cCCCEEEEEEEeC
Confidence 6999999999999999999 9999999999999999864 11111222 2334467888875
No 179
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.62 E-value=8.3e-09 Score=79.66 Aligned_cols=59 Identities=15% Similarity=0.155 Sum_probs=46.5
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.+++||+++|| |++||+|++|||++|.+. .| +..++.... +..+++|+|++
T Consensus 48 ~gv~V~~V~~~spA~~aGl----------l~~GD~I~~vng~~v~~~~~~~---~~~~l~~~~-~~v~l~v~r~~ 108 (113)
T 1va8_A 48 DSVIISRIVKGGAAEKSGL----------LHEGDEVLEINGIEIRGKDVNE---VFDLLSDMH-GTLTFVLIPSS 108 (113)
T ss_dssp SSEEEEEECTTSHHHHHTC----------CCTTCEEEEETTEECTTCCHHH---HHHHHHHCC-EEEEEEEECCC
T ss_pred CCEEEEEeCCCCHHHHcCC----------CCCCCEEEEECCEECCCCCHHH---HHHHHHcCC-CeEEEEEEECC
Confidence 6999999999999999998 588999999999999954 35 444443333 45788888763
No 180
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.62 E-value=1.7e-08 Score=76.02 Aligned_cols=73 Identities=22% Similarity=0.260 Sum_probs=52.7
Q ss_pred eeeeEEeccHHHHhhcCCCCCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeC
Q 019504 249 AGLNVDIAPDLVASQLNVGNGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAE 328 (340)
Q Consensus 249 ~~lg~~~~~~~~~~~~~~~~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~ 328 (340)
++||+.+.... ....|++|.+|.++|||+++|| ++||+|++|||++|.+.. ...+...+. .
T Consensus 22 ~~lG~~~~~~~-----~~~~gv~V~~V~~~spA~~aGL-----------~~GD~I~~ing~~v~~~~-~~~~~~~~~--~ 82 (100)
T 2eeh_A 22 GRLGFSVRGGS-----EHGLGIFVSKVEEGSSAERAGL-----------CVGDKITEVNGLSLESTT-MGSAVKVLT--S 82 (100)
T ss_dssp SSCSEEEECCT-----TTTCCEEEEEECTTSHHHHHTC-----------CSSCEEEEETTEECSSCC-HHHHHHHHH--S
T ss_pred CCccEEEEccc-----cCCCCEEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCCC-HHHHHHhhc--C
Confidence 45777764421 1236999999999999999999 999999999999999874 111222222 2
Q ss_pred CCCceEEEEeCC
Q 019504 329 PNQDHLTCLKSS 340 (340)
Q Consensus 329 ~~~~~~~~~~~~ 340 (340)
....+++|.|.+
T Consensus 83 ~~~v~l~v~R~g 94 (100)
T 2eeh_A 83 SSRLHMMVRRMG 94 (100)
T ss_dssp CSSEEEEEEECS
T ss_pred CCEEEEEEEECC
Confidence 455788888864
No 181
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.61 E-value=9.8e-09 Score=75.59 Aligned_cols=60 Identities=13% Similarity=0.144 Sum_probs=45.0
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||+++|| ++||+|++|||+++.+... ......+.. .....+++|.|++
T Consensus 27 ~~v~V~~V~~~spA~~aGl-----------~~GD~I~~ing~~v~~~~~-~~~~~~~~~-~g~~v~l~v~R~~ 86 (89)
T 2q3g_A 27 VPLSISRLTPGGKAAQAGV-----------AVGDWVLSIDGENAGSLTH-IEAQNKIRA-CGERLSLGLSRAI 86 (89)
T ss_dssp EEEEEEEECTTSHHHHTTC-----------CTTCEEEEETTEEGGGCCH-HHHHHHHHT-CTTEEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHh-CCCEEEEEEEeCC
Confidence 5899999999999999999 9999999999999997631 112222222 2344678888853
No 182
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.61 E-value=1.1e-08 Score=74.59 Aligned_cols=57 Identities=19% Similarity=0.085 Sum_probs=43.8
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEeeC-CCCceEEEEe
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLICAE-PNQDHLTCLK 338 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~~~-~~~~~~~~~~ 338 (340)
.|++|.+|.++|||+++| | ++||+|++|||+++.+. .| +..++...+ ....++++.|
T Consensus 25 ~~~~V~~v~~~spA~~aG~l-----------~~GD~I~~vng~~v~~~~~~~---~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 25 EFLQIKSLVLDGPAALDGKM-----------ETGDVIVSVNDTCVLGHTHAQ---VVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp BCEEEEEECTTSHHHHHCCC-----------CTTCEEEEETTEECTTCCHHH---HHHHHHTSCTTCEEEEEEEC
T ss_pred CCEEEEEECCCChHHHcCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHhCCCCCeEEEEEEC
Confidence 589999999999999999 8 99999999999999864 44 444444332 2345677665
No 183
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.61 E-value=1.1e-08 Score=75.97 Aligned_cols=57 Identities=19% Similarity=0.212 Sum_probs=46.1
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEc--cCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPV--SFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v--~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.+++|.+|.+++||+++| | ++||+|++|||+++ .+..| +..++.... +..+++|+|+
T Consensus 28 ~~~~V~~v~~gspA~~aG~L-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~~~~-~~v~l~v~~~ 87 (93)
T 3o46_A 28 GAIIVARIMRGGAADRSGLI-----------HVGDELREVNGIPVEDKRPEE---IIQILAQSQ-GAITFKIIPG 87 (93)
T ss_dssp CCEEEEEECTTSHHHHHTCC-----------CTTCEEEEETTEESTTSCHHH---HHHHHHHCC-EEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHhCC-CeEEEEEEeC
Confidence 689999999999999999 8 99999999999999 55555 445554433 4678888875
No 184
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.60 E-value=9.3e-09 Score=78.41 Aligned_cols=59 Identities=10% Similarity=0.088 Sum_probs=45.7
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | ++||+|++|||++|.+..+ ......+ ....+..+++|.|.
T Consensus 25 ~gv~V~~V~~gspA~~aG~L-----------~~GD~Il~Ing~~v~~~~~-~~~~~~~-~~~~~~v~l~v~R~ 84 (106)
T 2la8_A 25 IGCTIADLIQGQYPEIDSKL-----------QRGDIITKFNGDALEGLPF-QVCYALF-KGANGKVSMEVTRP 84 (106)
T ss_dssp SSEEEEECCTTSCHHHHTTC-----------CTTCEEEEESSCBCSSSCH-HHHHHHH-HSCBSCEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHCCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHH-hCCCCeEEEEEEeC
Confidence 699999999999999999 8 9999999999999998654 1111222 22334588888885
No 185
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.60 E-value=1.4e-08 Score=75.64 Aligned_cols=59 Identities=20% Similarity=0.314 Sum_probs=45.2
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | ++||+|++|||+++.+..+ ......+. ......++++.|.
T Consensus 29 ~gv~V~~V~~~spA~~aG~L-----------~~GD~I~~vng~~v~~~~~-~~~~~~~~-~~g~~v~l~v~R~ 88 (95)
T 2vwr_A 29 PGVFILDLLEGGLAAQDGRL-----------SSNDRVLAINGHDLKYGTP-ELAAQIIQ-ASGERVNLTIARP 88 (95)
T ss_dssp CSEEEEEECTTSHHHHHCCC-----------CTTCEEEEETTEECTTCCH-HHHHHHHH-HCCSEEEEEEEEE
T ss_pred CCEEEEEeCCCChHHHCCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHH-cCCCEEEEEEEcC
Confidence 599999999999999999 8 9999999999999998753 11222222 2345577888875
No 186
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.59 E-value=1.5e-08 Score=75.55 Aligned_cols=57 Identities=26% Similarity=0.251 Sum_probs=45.5
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|..|.++|||+++|| ++||+|++|||++|.+. .| +..++.. .++...++++|.
T Consensus 29 ~~~~V~~v~~~spA~~aGl-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~~-~~~~~~~~~~r~ 87 (95)
T 3r68_A 29 KGQIIKDIEPGSPAEAAGL-----------KNNDLVVAVNGKSVEALDHDG---VVEMIRK-GGDQTTLLVLDK 87 (95)
T ss_dssp CSEEEECCCTTSHHHHHTC-----------CTTEEEEEETTEECTTCCHHH---HHHHHHT-TTTEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHh-CCCeEEEEEECC
Confidence 4999999999999999999 99999999999999998 54 4444443 345566666664
No 187
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.59 E-value=1.5e-08 Score=76.51 Aligned_cols=59 Identities=20% Similarity=0.148 Sum_probs=45.0
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | ++||+|++|||+++.+... .....++.. .....+++|.|.
T Consensus 37 ~gv~V~~V~~~spA~~aG~L-----------~~GD~I~~vng~~v~~~~~-~~~~~~~~~-~g~~v~l~v~R~ 96 (101)
T 2jik_A 37 SGIYVSRIKENGAAALDGRL-----------QEGDKILSVNGQDLKNLLH-QDAVDLFRN-AGYAVSLRVQHR 96 (101)
T ss_dssp CCEEEEEECTTSHHHHHCCC-----------CTTCEEEEETTEECSSCCH-HHHHHHHHT-CCSEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHCCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHh-CCCeEEEEEEeC
Confidence 699999999999999999 8 9999999999999998742 112222222 234468888875
No 188
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.58 E-value=4.4e-09 Score=79.78 Aligned_cols=57 Identities=19% Similarity=0.169 Sum_probs=46.5
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccC--CCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSF--SCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~--~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.+++|.+|.++|||+++|| ++||+|++|||++|.+ ..| +..++... ....+++|.|+
T Consensus 29 ~~~~V~~V~~~spA~~aGL-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~~~-g~~v~l~v~R~ 87 (103)
T 1v5l_A 29 QPLVITRITPGSKAAAANL-----------CPGDVILAIDGFGTESMTHAD---AQDRIKAA-SYQLCLKIDRA 87 (103)
T ss_dssp EEEECSCBCTTSTTGGGTC-----------CTTCBEEEETTEECSSCCHHH---HHHHHTTC-CSEEECEECCC
T ss_pred CCeEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHhC-CCeEEEEEEEC
Confidence 4799999999999999999 9999999999999999 665 44444433 45577788775
No 189
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.58 E-value=1.2e-08 Score=77.13 Aligned_cols=59 Identities=19% Similarity=0.113 Sum_probs=45.2
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | ++||+|++|||++|.+... ......+.. .....+++|.|.
T Consensus 34 ~gv~V~~V~~~spA~~aG~L-----------~~GD~I~~vng~~v~~~~~-~~~~~~~~~-~g~~v~l~v~R~ 93 (102)
T 2i1n_A 34 PGIFITKIIPGGAAAMDGRL-----------GVNDCVLRVNEVDVSEVVH-SRAVEALKE-AGPVVRLVVRRR 93 (102)
T ss_dssp CCEEEEEECTTSHHHHHCCC-----------CTTCEEEEETTEECSSCCH-HHHHHHHHH-SCSEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHCCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHc-CCCeEEEEEEeC
Confidence 699999999999999999 8 9999999999999988552 112222222 335577888875
No 190
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.58 E-value=1.9e-08 Score=77.41 Aligned_cols=60 Identities=22% Similarity=0.269 Sum_probs=47.8
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccC--CCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSF--SCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~--~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||+++|| |++||+|++|||+++.+ ..| +..++.........+++.|++
T Consensus 26 ~~~~V~~v~~~spA~~aGl----------l~~GD~I~~ing~~v~~~~~~~---~~~~l~~~~g~~v~l~v~R~g 87 (112)
T 1qau_A 26 PPVIISDLIRGGAAEQSGL----------IQAGDIILAVNDRPLVDLSYDS---ALEVLRGIASETHVVLILRGP 87 (112)
T ss_dssp SCEEEEEECTTSHHHHHTC----------CCTTCEEEEETTEECTTSCHHH---HHHHHHHSCSSSEEEEEEECC
T ss_pred CCEEEEEeCCCChHHHcCC----------CCCCCEEEEECCEECCCCCHHH---HHHHHHhCCCCcEEEEEEeCC
Confidence 5899999999999999996 38899999999999998 555 444554433355788888763
No 191
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.58 E-value=2.2e-08 Score=74.03 Aligned_cols=59 Identities=19% Similarity=0.177 Sum_probs=44.8
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++|| ++||+|++|||++|.+... ..+..++.. .....++++.|.
T Consensus 24 ~~~~V~~V~~~spA~~aGl-----------~~GD~I~~vng~~v~~~~~-~~~~~~l~~-~~~~v~l~v~R~ 82 (91)
T 2f5y_A 24 SPVRVQAVDSGGPAERAGL-----------QQLDTVLQLNERPVEHWKC-VELAHEIRS-CPSEIILLVWRM 82 (91)
T ss_dssp SSCEEEEECTTSHHHHHTC-----------CTTCEEEEETTEECTTCCH-HHHHHHHHT-CSSEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHc-CCCeEEEEEEeC
Confidence 5799999999999999999 9999999999999997531 013333322 234568888885
No 192
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.58 E-value=1.6e-08 Score=75.23 Aligned_cols=60 Identities=18% Similarity=0.174 Sum_probs=45.7
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.+++|.+|.+++||+++|| ++||+|++|||++|.+... ......+.. .....+++|.|.+
T Consensus 32 ~~v~V~~V~~~spA~~aGl-----------~~GD~I~~ing~~v~~~~~-~~~~~~~~~-~g~~v~l~v~R~g 91 (94)
T 2eeg_A 32 APLTISRVHAGSKAALAAL-----------CPGDLIQAINGESTELMTH-LEAQNRIKG-CHDHLTLSVSSGP 91 (94)
T ss_dssp SCCEECCCCSSSHHHHTTC-----------CTTCEEEEETTEETTTCCH-HHHHHHHHT-CCSCEEEEEECCS
T ss_pred CCEEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHc-CCCeEEEEEEeCC
Confidence 5899999999999999999 9999999999999998742 112222222 3345788888863
No 193
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.58 E-value=9.9e-09 Score=79.73 Aligned_cols=59 Identities=22% Similarity=0.176 Sum_probs=45.1
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | ++||+|++|||++|.+... .+....+.. .....+++|.|.
T Consensus 54 ~gv~V~~V~~gspA~~aG~L-----------~~GD~Il~Vng~~v~~~~~-~~~~~~l~~-~g~~v~l~v~R~ 113 (117)
T 2byg_A 54 NSIYVTKIIDGGAAQKDGRL-----------QVGDRLLMVNNYSLEEVTH-EEAVAILKN-TSEVVYLKVGKP 113 (117)
T ss_dssp CCEEEEEECTTSHHHHHCCC-----------CTTCEEEEETTEECTTCCH-HHHHHHHHT-CCSEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHc-CCCeEEEEEEeC
Confidence 689999999999999999 8 9999999999999995432 113333332 345578888875
No 194
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.58 E-value=1.2e-08 Score=75.07 Aligned_cols=69 Identities=13% Similarity=0.100 Sum_probs=52.2
Q ss_pred eeeEEeccHHHHhhcCCCCCcEEEeeCCCChhhh-cCCCccccCCCCCCcCCcEEEEECCEEcc--CCCCCCCceeEEEe
Q 019504 250 GLNVDIAPDLVASQLNVGNGALVLQVPGNSLAAK-AGILPTTRGFAGNIILGDIIVAVNNKPVS--FSCLSIPSRIYLIC 326 (340)
Q Consensus 250 ~lg~~~~~~~~~~~~~~~~g~~V~~v~~~spa~~-~gl~~~~~~~~~~l~~GDvi~~i~g~~v~--~~~d~~~~~~~~~~ 326 (340)
+||+.+.... ..+++|.+|.++|||++ +|| ++||.|++|||+++. +.+| +..++..
T Consensus 14 ~lG~~i~~~~-------~~~~~I~~V~~gspA~~~agL-----------~~GD~I~~Ing~~v~~~~~~~---~~~~l~~ 72 (88)
T 1kwa_A 14 PMGITLKMNE-------LNHCIVARIMHGGMIHRQGTL-----------HVGDEIREINGISVANQTVEQ---LQKMLRE 72 (88)
T ss_dssp CCCEEEECSC-------GGGEEEEEECTTSHHHHHTCC-----------CTTCEEEEETTEEGGGSCHHH---HHHHHHH
T ss_pred ceeEEEEeCC-------CCCEEEEEECCCCHHHHcCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHhc
Confidence 4676664311 15899999999999999 888 999999999999999 6665 5555554
Q ss_pred eCCCCceEEEEeCC
Q 019504 327 AEPNQDHLTCLKSS 340 (340)
Q Consensus 327 ~~~~~~~~~~~~~~ 340 (340)
... ..+++|+|.+
T Consensus 73 ~~~-~v~l~v~r~~ 85 (88)
T 1kwa_A 73 MRG-SITFKIVPSY 85 (88)
T ss_dssp CCE-EEEEEEECCC
T ss_pred CCC-cEEEEEECCc
Confidence 443 6788888753
No 195
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.58 E-value=1.4e-08 Score=74.94 Aligned_cols=57 Identities=18% Similarity=0.288 Sum_probs=44.9
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEcc--CCCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVS--FSCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~--~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.| +|.+|.++|||+++|| ++||+|++|||++|. +..| +..++.. .....+++|+++|
T Consensus 32 ~G-~V~~V~~~spA~~aGL-----------~~GD~Il~Ing~~v~~~~~~~---~~~~l~~-~g~~v~l~v~p~s 90 (90)
T 1y7n_A 32 NG-IICSLMRGGIAERGGV-----------RVGHRIIEINGQSVVATPHEK---IVHILSN-AVGEIHMKTMPAA 90 (90)
T ss_dssp TT-EEEEECTTSHHHHHTC-----------CSSCEEEEETTEECTTSCHHH---HHHHHHH-CCEEEEEEEECCC
T ss_pred CC-EEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHc-CCCeEEEEEEECc
Confidence 35 8999999999999999 999999999999995 5555 4444443 3455778888765
No 196
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.58 E-value=1.2e-08 Score=77.51 Aligned_cols=59 Identities=22% Similarity=0.199 Sum_probs=44.9
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | ++||+|++|||+++.+... ......+. ......+++|.|.
T Consensus 33 ~gv~V~~V~~~spA~~aG~L-----------~~GD~I~~vng~~v~~~~~-~~~~~~~~-~~~~~v~l~v~R~ 92 (105)
T 2awx_A 33 NSIYVTKIIEGGAAHKDGKL-----------QIGDKLLAVNSVSLEEVTH-EEAVTALK-NTSDFVYLKVAKP 92 (105)
T ss_dssp CCEEEEEECTTSHHHHHCCC-----------CTTCEEEEETTEECTTCBH-HHHHHHHH-SCCSEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHCCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHH-cCCCeEEEEEEcC
Confidence 599999999999999999 8 9999999999999987653 11222222 2234567888875
No 197
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.57 E-value=7e-09 Score=80.69 Aligned_cols=59 Identities=19% Similarity=0.090 Sum_probs=49.4
Q ss_pred CCCcEEEeeCC--CChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 267 GNGALVLQVPG--NSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 267 ~~g~~V~~v~~--~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
..|++|.+|.+ ++||+++|| ++||+|++|||++|.+. .| +..++... ....+++|.|++
T Consensus 43 ~~gv~V~~V~~~~~spA~~aGL-----------~~GD~Il~Vng~~v~~~~~~d---l~~~l~~~-g~~v~l~v~R~g 105 (118)
T 2yub_A 43 ATTVQVKEVNRMHISPNNRNAI-----------HPGDRILEINGTPVRTLRVEE---VEDAIKQT-SQTLQLLIEHDP 105 (118)
T ss_dssp CCEEEEEECCTTTSCTTHHHHC-----------CTTCCEEEESSSBTTTSCHHH---HHHHHHCC-SSCEEEEEEECS
T ss_pred CCcEEEEEecCCCCChHHHcCC-----------CCCCEEEEECCEECCCcCHHH---HHHHHHhC-CCEEEEEEEECC
Confidence 47999999999 999999999 99999999999999998 76 55555544 445788998863
No 198
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.57 E-value=2.4e-08 Score=76.48 Aligned_cols=58 Identities=17% Similarity=0.123 Sum_probs=45.9
Q ss_pred CCCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEeeCCCCceEEEEeC
Q 019504 267 GNGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 267 ~~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
+.|++|..|.++|||+++|| ++||+|++|||++|.+. .+ +..++.. .....+++|+|.
T Consensus 44 ~~gv~V~~V~~~spA~~aGl-----------~~GD~I~~vng~~v~~~~~~~---~~~~l~~-~~~~v~l~v~~~ 103 (109)
T 1q3o_A 44 PALQYLESVDEGGVAWRAGL-----------RMGDFLIEVNGQNVVKVGHRQ---VVNMIRQ-GGNTLMVKVVMV 103 (109)
T ss_dssp CSSEEEEEECTTSHHHHTTC-----------CTTCEEEEETTEECTTCCHHH---HHHHHHH-TTTEEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHh-CCCEEEEEEEEC
Confidence 35999999999999999999 99999999999999998 54 3333332 234467777763
No 199
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.57 E-value=2.4e-08 Score=74.70 Aligned_cols=58 Identities=21% Similarity=0.264 Sum_probs=45.4
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||+++| | ++||+|++|||+++.+. .| +..++. ......+++|.|.+
T Consensus 30 ~~~~V~~V~~~spA~~aG~l-----------~~GD~I~~vng~~v~~~~~~~---~~~~l~-~~g~~v~l~v~R~~ 90 (97)
T 1n7e_A 30 DPIIISSLTKGGLAERTGAI-----------HIGDRILAINSSSLKGKPLSE---AIHLLQ-MAGETVTLKIKKQT 90 (97)
T ss_dssp SCCEEEEECTTSHHHHHTCC-----------CTTCEEEEETTEECTTCCHHH---HHHHHH-TCCSEEEEEEECCC
T ss_pred CCEEEEEECCCCHHHHCCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHH-cCCCeEEEEEEeCC
Confidence 699999999999999999 8 99999999999999864 33 333333 23345678888753
No 200
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.56 E-value=2.9e-08 Score=74.41 Aligned_cols=59 Identities=22% Similarity=0.231 Sum_probs=44.9
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | ++||+|++|||+++.+... ......+... +...++++.|.
T Consensus 30 ~gv~V~~V~~~spA~~aG~l-----------~~GD~I~~vng~~v~~~~~-~~~~~~~~~~-~~~v~l~v~R~ 89 (98)
T 2opg_A 30 GAIIIHEVYEEGAACKDGRL-----------WAGDQILEVNGIDLRKATH-DEAINVLRQT-PQRVRLTLYRD 89 (98)
T ss_dssp CSEEEEEECTTSHHHHHCCC-----------CTTCEEEEETTEECTTCCH-HHHHHHHHTC-CSEEEEEEEEC
T ss_pred CCEEEEEECCCChHHhCCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHhC-CCeEEEEEEcC
Confidence 599999999999999999 8 9999999999999998651 1122222222 24567888875
No 201
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.56 E-value=2.3e-08 Score=74.60 Aligned_cols=59 Identities=25% Similarity=0.157 Sum_probs=44.6
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | ++||+|++|||+++.+... ..+...+.. .....+++|.|.
T Consensus 33 ~g~~V~~V~~~spA~~aG~l-----------~~GD~I~~vng~~v~~~~~-~~~~~~l~~-~g~~v~l~v~R~ 92 (96)
T 1d5g_A 33 GGIYVKAVIPQGAAESDGRI-----------HKGDRVLAVNGVSLEGATH-KQAVETLRN-TGQVVHLLLEKG 92 (96)
T ss_dssp SCCEEEEECTTSHHHHTTCC-----------CTTCEEEEETTEECTTCCH-HHHHHHHHS-CCSEEEEEEECC
T ss_pred CCEEEEEeCCCChHHHcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHc-CCCeEEEEEEcC
Confidence 699999999999999999 8 9999999999999996531 013333332 334467888775
No 202
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.56 E-value=1.8e-08 Score=78.29 Aligned_cols=60 Identities=23% Similarity=0.158 Sum_probs=45.7
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||+++| | ++||+|++|||++|.+... ......+.. ..+..+++|.|.+
T Consensus 53 ~gv~V~~V~~~spA~~aG~L-----------~~GD~Il~Vng~~v~~~~~-~~~~~~l~~-~~~~v~l~v~R~g 113 (117)
T 2fne_A 53 LPIYVKTVFAKGAASEDGRL-----------KRGDQIIAVNGQSLEGVTH-EEAVAILKR-TKGTVTLMVLSSD 113 (117)
T ss_dssp EEEEEEEECTTSHHHHHCCC-----------CTTCEEEEETTEECTTCCH-HHHHHHHHH-CCSSEEEEEEECS
T ss_pred CCEEEEEECCCChHHHcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHc-CCCeEEEEEEeCC
Confidence 589999999999999999 8 9999999999999995431 113333333 3345889998863
No 203
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.55 E-value=2.5e-08 Score=78.18 Aligned_cols=58 Identities=21% Similarity=0.096 Sum_probs=46.5
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEeeC-CCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLICAE-PNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~~~-~~~~~~~~~~~ 339 (340)
.|++|.+|.+++||+++| | ++||+|++|||++|.+. .| +..++...+ ....+++|.|.
T Consensus 44 ~gv~V~~V~~~spA~~aG~L-----------~~GD~Il~Vng~~v~~~~~~~---~~~~l~~~~~g~~v~l~v~R~ 105 (123)
T 1ueq_A 44 EFLQVKSVIPDGPAAQDGKM-----------ETGDVIVYINEVCVLGHTHAD---VVKLFQSVPIGQSVNLVLCRG 105 (123)
T ss_dssp CCCEEEEECTTSHHHHTSCC-----------CTTCEEEEETTEECTTSCHHH---HHHHHHTSCTTCEEEEEEEES
T ss_pred CCEEEEEECCCCHHHHCCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHhCCCCCeEEEEEEeC
Confidence 589999999999999999 8 99999999999999853 44 444454432 45578888885
No 204
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.55 E-value=2e-08 Score=74.60 Aligned_cols=60 Identities=22% Similarity=0.205 Sum_probs=45.5
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||+++| | ++||+|++|||+++.+... ......+.. .....+++|.|.+
T Consensus 33 ~gv~V~~V~~~spA~~aG~l-----------~~GD~I~~vng~~v~~~~~-~~~~~~~~~-~~~~v~l~v~R~g 93 (94)
T 2fe5_A 33 NSIYITKIIEGGAAQKDGRL-----------QIGDRLLAVNNTNLQDVRH-EEAVASLKN-TSDMVYLKVAKPG 93 (94)
T ss_dssp CCEEEEEECTTSHHHHHCCC-----------CTTCEEEEETTEECTTCBH-HHHHHHHHT-CCSEEEEEEECCC
T ss_pred CCEEEEEECCCChHHHcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHc-CCCeEEEEEEcCC
Confidence 699999999999999999 8 9999999999999998642 112222222 2235788888863
No 205
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B
Probab=98.55 E-value=6.4e-07 Score=72.67 Aligned_cols=124 Identities=19% Similarity=0.230 Sum_probs=77.0
Q ss_pred CCCcEEEEEEecCC---CCccceeecCCCCCCCCCEEEEEecCCCC--------CCceeEEEEeeecc----ccccCCCc
Q 019504 115 RAKDLAVLKIEASE---DLLKPINVGQSSFLKVGQQCLAIGNPFGF--------DHTLTVGVISGLNR----DIFSQAGV 179 (340)
Q Consensus 115 ~~~DlAlL~v~~~~---~~~~~~~l~~~~~~~~G~~v~~iG~p~g~--------~~~~~~G~vs~~~~----~~~~~~~~ 179 (340)
..+|||||+++.+. ..+.|+.|.... ...|+.+++.||.... ........+.-+.. ..... .
T Consensus 6 ~~nDIALl~L~~~v~~~~~v~picLp~~~-~~~~~~~~v~GWG~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~--~ 82 (152)
T 2pka_B 6 YSHDLMLLRLQSPAKITDAVKVLELPTQE-PELGSTCEASGWGSIEPGPDDFEFPDEIQCVQLTLLQNTFCADAHPD--K 82 (152)
T ss_dssp CTTCCEEEEESSCCCCCSSCCCCCCCSSC-CCTTCEEEEEESSCSSCCSSCCCCCSBCEEEEEEEECHHHHHHHCSS--B
T ss_pred CCCCEEEEEECCCCcCCCCEEeEECCCCC-CCCCCEEEEEecccccCCCCcCCCCccceEEEeEEcCHHHhhhhhcC--C
Confidence 35799999998763 357788886543 4679999999986421 12233333332221 10100 0
Q ss_pred eecceEEE-----eeccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 180 TIGGGIQT-----DAAINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 180 ~~~~~i~~-----d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
....+|-. ....|.|+|||||+- +|+++||+++....++.....+....+...++|+++.++
T Consensus 83 ~~~~~iCa~~~~~~~~~C~GDsGgPL~~-~g~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~ 149 (152)
T 2pka_B 83 VTESMLCAGYLPGGKDTCMGDSGGPLIC-NGMWQGITSWGHTPCGSANKPSIYTKLIFYLDWIDDTIT 149 (152)
T ss_dssp CCTTEEEEECTTSSCBCCTTCTTCEEEE-TTEEEEEECCCCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCCCEEeeccCCCCCcccCCccccceEE-CCEEEEEEecCCCCCCCCCCCeEEEEHHHHHHHHHHHhc
Confidence 00122322 235789999999995 589999999874334322345667888888899887664
No 206
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.55 E-value=1.8e-08 Score=78.83 Aligned_cols=58 Identities=19% Similarity=0.206 Sum_probs=48.7
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccC--CCCCCCceeEEEeeC-CCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSF--SCLSIPSRIYLICAE-PNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~--~~d~~~~~~~~~~~~-~~~~~~~~~~~ 339 (340)
.+++|.+|.+++||+++| | ++||+|++|||++|.+ ..| +..++.... ....+++|.|+
T Consensus 45 ~~~~V~~V~~~spA~~aG~L-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~~~~~g~~v~l~v~R~ 106 (122)
T 1v5q_A 45 SPPLISYIEADSPAERCGVL-----------QIGDRVMAINGIPTEDSTFEE---ANQLLRDSSITSKVTLEIEFD 106 (122)
T ss_dssp SCCEEEEECTTSHHHHSCCC-----------CTTCCEEEETTEESSSSCHHH---HHHHHHHHTTTTCEEEEEEEE
T ss_pred CCcEEEEECCCChHHHcCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHhCCCCCeEEEEEEEC
Confidence 578999999999999999 8 9999999999999988 666 556665554 45688898885
No 207
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.54 E-value=2.6e-08 Score=73.77 Aligned_cols=59 Identities=20% Similarity=0.237 Sum_probs=45.1
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | ++||+|++|||+++.+... ......+. ......+++|.|.
T Consensus 29 ~gv~V~~V~~~spA~~aG~L-----------~~GD~I~~vng~~v~~~~~-~~~~~~~~-~~~~~v~l~v~R~ 88 (92)
T 2qg1_A 29 TGVFVSDIVKGGIADADGRL-----------MQGDQILMVNGEDVRNATQ-EAVAALLK-CSLGTVTLEVGRI 88 (92)
T ss_dssp CSCEEEEECTTSHHHHHTCC-----------CTTCEEEEETTEECTTCCH-HHHHHHHH-HCCSEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHH-cCCCeEEEEEEcc
Confidence 699999999999999999 8 9999999999999988642 11222222 2334578888875
No 208
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.54 E-value=1.1e-08 Score=77.51 Aligned_cols=58 Identities=24% Similarity=0.180 Sum_probs=46.0
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEeeC-CCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLICAE-PNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~~~-~~~~~~~~~~~ 339 (340)
.+++|.+|.+++||+++| | ++||+|++|||++|.+. .| +..++.... ....+++|.|.
T Consensus 34 ~~~~V~~V~~~spA~~aG~L-----------~~GD~Il~ing~~v~~~~~~~---~~~~l~~~~~g~~v~l~v~R~ 95 (103)
T 1uep_A 34 QPILIGAVIAMGSADRDGRL-----------HPGDELVYVDGIPVAGKTHRY---VIDLMHHAARNGQVNLTVRRK 95 (103)
T ss_dssp SCCBEEEECTTSTTGGGTCC-----------CTTCEEEEETTEECTTSCHHH---HHHHHHHHHHHTEEEEEEEEE
T ss_pred CCeEEEEeCCCChHHhCCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHhCCCCCcEEEEEEeC
Confidence 689999999999999999 8 99999999999999764 33 334444332 35588888885
No 209
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.54 E-value=2.6e-08 Score=77.64 Aligned_cols=60 Identities=22% Similarity=0.160 Sum_probs=45.9
Q ss_pred CCCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 267 GNGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 267 ~~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
..|++|.+|.+++||+++| | ++||+|++|||++|.+... ......+... ....+++|.|.
T Consensus 46 ~~gv~V~~V~~~spA~~aG~L-----------~~GD~Il~vng~~v~~~~~-~~~~~~~~~~-g~~v~l~v~R~ 106 (120)
T 2eno_A 46 DSGIYVSRIKENGAAALDGRL-----------QEGDKILSVNGQDLKNLLH-QDAVDLFRNA-GYAVSLRVQHR 106 (120)
T ss_dssp CCSEEEEEECSSSHHHHSCCS-----------CTTCEEEEETTEECCSCCH-HHHHHHHHHH-CSEEEEEEEEE
T ss_pred CCCEEEEEECCCChHHHCCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHcC-CCeEEEEEEeC
Confidence 3699999999999999999 8 9999999999999998762 1133333222 34577888875
No 210
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.54 E-value=2.5e-08 Score=75.74 Aligned_cols=56 Identities=21% Similarity=0.153 Sum_probs=45.5
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccC--CCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSF--SCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~--~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.+++||+++|| ++||+|++|||++|.+ ..| +..++.. ....+++|.|.
T Consensus 41 ~g~~V~~V~~~spA~~aGL-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~~--~~~v~l~v~r~ 98 (104)
T 1wi2_A 41 LGIFISKVIPDSDAHRAGL-----------QEGDQVLAVNDVDFQDIEHSK---AVEILKT--AREISMRVRFF 98 (104)
T ss_dssp CCCEEEEECTTSHHHHHTC-----------CTTCEEEEETTEECSSCCHHH---HHHHHHH--SSSEEEEEECC
T ss_pred CCEEEEEeCCCChHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHhC--CCEEEEEEEEC
Confidence 6899999999999999999 9999999999999998 454 3333333 34578888774
No 211
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.53 E-value=3.3e-08 Score=75.93 Aligned_cols=59 Identities=15% Similarity=0.110 Sum_probs=46.5
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEee-CCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLICA-EPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~~-~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||+++| | ++||+|++|||++|.+. .| +..++... .....+++|.|.+
T Consensus 39 ~g~~V~~V~~~spA~~aG~l-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~~~~~g~~v~l~v~R~~ 101 (111)
T 2koj_A 39 APIYVKNILPRGAAIQDGRL-----------KAGDRLIEVNGVDLAGKSQEE---VVSLLRSTKMEGTVSLLVFRQE 101 (111)
T ss_dssp SCEEEEEECSSSHHHHHCSS-----------CTTCEEEEETTEECTTSCHHH---HHHHHHHCCCSSEEEEEEEECC
T ss_pred cCEEEEEECCCChHHHCCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHhCCCCCeEEEEEEeCC
Confidence 689999999999999999 8 99999999999999775 44 44444432 2345788888863
No 212
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.53 E-value=2.7e-08 Score=77.72 Aligned_cols=59 Identities=15% Similarity=0.098 Sum_probs=46.9
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEee-CCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLICA-EPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~~-~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||+++| | ++||+|++|||++|.+. .| +..++... .....+++|.|.+
T Consensus 58 ~gv~V~~V~~gspA~~aG~L-----------~~GD~Il~Ing~~v~~~~~~~---~~~~l~~~~~g~~v~l~v~R~g 120 (121)
T 2kom_A 58 APIYVKNILPRGAAIQDGRL-----------KAGDRLIEVNGVDLVGKSQEE---VVSLLRSTKMEGTVSLLVFRQE 120 (121)
T ss_dssp CCEEEEEECTTSHHHHHTCC-----------CSSSEEEEETTEECTTSCHHH---HHHHHHHCCSSCEEEEEEEECC
T ss_pred CCEEEEEECCCChHHHcCCC-----------CCCCEEEEECCEEcCCCCHHH---HHHHHhcCCCCCEEEEEEEeCC
Confidence 689999999999999999 8 99999999999999985 33 34344432 2345788888864
No 213
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.53 E-value=1.1e-08 Score=75.55 Aligned_cols=60 Identities=17% Similarity=0.135 Sum_probs=44.9
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeC-CCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAE-PNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~-~~~~~~~~~~~ 339 (340)
.+++|.+|.++|||+++| | ++||+|++|||++|.+... .++..++.... ....+++|.|.
T Consensus 27 ~~~~V~~V~~~spA~~aG~L-----------~~GD~I~~ing~~v~~~~~-~~~~~~l~~~~~~~~v~l~v~R~ 88 (90)
T 2q9v_A 27 EPIYIGHIVPLGAADTDGRL-----------RSGDELISVDGTPVIGKSH-QLVVQLMQQAAKQGHVNLTVRQT 88 (90)
T ss_dssp SCEEEEEECTTSHHHHHCCC-----------CTTCEEEEETTEECTTSCH-HHHHHHHHHHHHHTEEEEEEEEC
T ss_pred CCEEEEEECCCChHHHCCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHhCCCCCeEEEEEEec
Confidence 579999999999999999 8 9999999999999965431 11333443332 22578888885
No 214
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.53 E-value=1.9e-08 Score=83.09 Aligned_cols=50 Identities=22% Similarity=0.274 Sum_probs=44.0
Q ss_pred eeeeeEEeccHHHHhhcCCCCCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCC
Q 019504 248 RAGLNVDIAPDLVASQLNVGNGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCL 316 (340)
Q Consensus 248 ~~~lg~~~~~~~~~~~~~~~~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d 316 (340)
++|||+.+.... .|++|.+|.++|||+++|| ++||+|++|||+++.+..+
T Consensus 15 ~~~lG~~~~~~~--------~g~~V~~v~~~spA~~aGl-----------~~GD~I~~ing~~v~~~~~ 64 (166)
T 1w9e_A 15 DGKIGLRLKSID--------NGIFVQLVQANSPASLVGL-----------RFGDQVLQINGENCAGWSS 64 (166)
T ss_dssp TSCCSEEEEEET--------TEEEEEEECTTSHHHHTTC-----------CTTCEEEEETTEECTTCCH
T ss_pred CCcEeEEEEeCC--------CCEEEEEECCCChHHHcCC-----------CCCCEEEEECCEECCCCCH
Confidence 468888875532 6999999999999999999 9999999999999999875
No 215
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.52 E-value=2.7e-08 Score=74.97 Aligned_cols=59 Identities=19% Similarity=0.142 Sum_probs=45.0
Q ss_pred CCcEEEeeCCCChhhhc-CCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKA-GILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~-gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.+++|.+|.++|||+++ || ++||+|++|||++|.+..+ .....+. ......+++|.|..
T Consensus 35 ~~v~V~~V~~~spA~~agGL-----------~~GD~I~~ing~~v~~~~~--~~~~~~~-~~~~~v~l~v~R~~ 94 (100)
T 2edp_A 35 EPLTVSKIEDGGKAALSQKM-----------RTGDELVNINGTPLYGSRQ--EALILIK-GSFRILKLIVRRRN 94 (100)
T ss_dssp EEEEECCCCTTSHHHHHTSC-----------CTTCEEEEETTEECCSCSH--HHHHHHH-TCCSSCEEEEEECC
T ss_pred CCeEEEEECCCCHHHHcCCC-----------CCCCEEEEECCEEccchHH--HHHHHHH-hCCCeEEEEEEeCC
Confidence 47999999999999999 99 9999999999999988521 1222222 22355789999863
No 216
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.52 E-value=1.4e-08 Score=78.50 Aligned_cols=57 Identities=25% Similarity=0.249 Sum_probs=45.9
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++|| ++||+|++|||++|.+. .| +..++.. .....+++|.|.
T Consensus 38 ~g~~V~~V~~~spA~~aGL-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~~-~g~~v~l~v~R~ 96 (114)
T 2edz_A 38 DGHLIRVIEEGSPAEKAGL-----------LDGDRVLRINGVFVDKEEHAQ---VVELVRK-SGNSVTLLVLDG 96 (114)
T ss_dssp CSCEEECCCTTCTTGGGTC-----------CTTCEEEEESSSBCSSSCHHH---HHHHHHH-TCSEEEEEEECH
T ss_pred CCeEEEEeCCCChHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHc-CCCEEEEEEEEC
Confidence 6999999999999999999 99999999999999986 33 3333332 345578888874
No 217
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.52 E-value=1.6e-08 Score=78.58 Aligned_cols=59 Identities=12% Similarity=0.178 Sum_probs=45.7
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.+++||+++| | ++||+|++|||++|.+... .+...++.. .....+++|.|+
T Consensus 49 ~g~~V~~v~~~s~A~~aG~L-----------~~GD~Il~vng~~v~~~~~-~~~~~~l~~-~~~~v~l~v~R~ 108 (117)
T 1ujd_A 49 IGAYIAKILPGGSAEQTGKL-----------MEGMQVLEWNGIPLTSKTY-EEVQSIISQ-QSGEAEICVRLD 108 (117)
T ss_dssp EEEEEEEECTTCHHHHHSSC-----------CTTCEEEEETTEECTTCCH-HHHHHHHSC-CSSCEEEEEESS
T ss_pred cCEEEEEECCCCHHHHcCCC-----------CCCCEEEEECCEEcCCCCH-HHHHHHHhc-CCCEEEEEEEEC
Confidence 489999999999999999 8 9999999999999988642 113333333 345578888875
No 218
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.52 E-value=3.5e-08 Score=75.17 Aligned_cols=59 Identities=24% Similarity=0.214 Sum_probs=44.3
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | ++||+|++|||++|.+... ......+. ......+++|.|.
T Consensus 32 ~gv~V~~V~~gspA~~aG~L-----------~~GD~Il~Vng~~v~~~~~-~~~~~~l~-~~~~~v~l~v~R~ 91 (106)
T 4amh_A 32 NSIYVTKIIEGGAAHKDGKL-----------QIGDKLLAVNNVALEEVTH-EEAVTALK-NTSDFVYLKVAKP 91 (106)
T ss_dssp CCEEEEEECTTSHHHHHCCC-----------CTTCEEEEETTEECSSCCH-HHHHHHHH-SCCSEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHCCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHh-CCCCeEEEEEEeC
Confidence 599999999999999999 8 9999999999999987542 11222222 2334567777775
No 219
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.52 E-value=3.8e-08 Score=77.66 Aligned_cols=58 Identities=21% Similarity=0.169 Sum_probs=44.5
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++|| ++||+|++|||++|.+..+ .+.....+......++|.|.
T Consensus 46 ~gv~V~~V~~~spA~~aGL-----------~~GD~I~~vng~~v~~~~~---~~~~~~~~~~~~v~l~v~R~ 103 (128)
T 1uf1_A 46 LGIYITGVDPGSEAEGSGL-----------KVGDQILEVNGRSFLNILH---DEAVRLLKSSRHLILTVKDV 103 (128)
T ss_dssp CCCEEEEECTTCHHHHHTC-----------CTTCEEEEETTEECSSCCH---HHHHHHHTTCSEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHCCC-----------CCCCEEEEECCEECCCCCH---HHHHHHHhcCCeEEEEEEEC
Confidence 5999999999999999999 9999999999999999764 11111112234577777775
No 220
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.52 E-value=1.6e-08 Score=78.45 Aligned_cols=94 Identities=18% Similarity=0.176 Sum_probs=60.7
Q ss_pred hHhHHHHHHHHHHcCceee--------eeeeEEeccHHHHhhcCCCCCcEEEeeCCCChhhhcC-CCccccCCCCCCcCC
Q 019504 230 SSTVLKIVPQLIQYGKVVR--------AGLNVDIAPDLVASQLNVGNGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILG 300 (340)
Q Consensus 230 ~~~i~~~l~~l~~~~~~~~--------~~lg~~~~~~~~~~~~~~~~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~G 300 (340)
.+.+...++++....++.. .+||+.+.... ....-..|++|.+|.++|||+++| | ++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~v~l~k~~~~~lG~~i~~~~--~~~~~~~gv~V~~V~~~spA~~aG~l-----------~~G 71 (117)
T 2o2t_A 5 CDEFDQLIKNMAQGRHVEVFELLKPPSGGLGFSVVGLR--SENRGELGIFVQEIQEGSVAHRDGRL-----------KET 71 (117)
T ss_dssp CHHHHHHHHHHHTTSCEEEEEEECCSSSCSSCCEEEEE--CCC--CEEEEECCCCTTSHHHHHCCC-----------CTT
T ss_pred hHHHHHHHHhhccCCeEEEEEEEECCCCCCCEEEeecc--cCCCCCCCEEEEEECCCCHHHHCCCC-----------CCC
Confidence 3456667777666554321 23555442110 000112589999999999999999 8 999
Q ss_pred cEEEEECCEEcc---CCCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 301 DIIVAVNNKPVS---FSCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 301 Dvi~~i~g~~v~---~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
|+|++|||++|. +..| +..++.. .....+++|.|.+
T Consensus 72 D~Il~ing~~v~~~~~~~~---~~~~l~~-~~~~v~l~v~R~~ 110 (117)
T 2o2t_A 72 DQILAINGQALDQTITHQQ---AISILQK-AKDTVQLVIARGS 110 (117)
T ss_dssp CEEEEETTEECCTTSCHHH---HHHHHHH-CCSEEEEEEESSC
T ss_pred CEEEEECCEECCCCCCHHH---HHHHHHc-CCCEEEEEEEeCC
Confidence 999999999998 5544 4334433 3455778888753
No 221
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.51 E-value=1.6e-08 Score=76.27 Aligned_cols=57 Identities=19% Similarity=0.179 Sum_probs=45.4
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.+++|.+|.++|||+++|| ++||+|++|||++|.+. .| +..++.. .++..+++|.|.
T Consensus 36 ~~~~V~~V~~~spA~~aGL-----------~~GD~I~~vng~~v~~~~~~~---~~~~l~~-~~~~v~l~v~R~ 94 (100)
T 1whd_A 36 SPVRVQAVDSGGPAERAGL-----------QQLDTVLQLNERPVEHWKCVE---LAHEIRS-CPSEIILLVWRV 94 (100)
T ss_dssp SSCBCCBCCTTSHHHHHTC-----------CSSCEEEEETTEECTTCCHHH---HHHHHHH-CSSEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHc-CCCeEEEEEEEC
Confidence 5899999999999999999 99999999999999964 44 3333333 234478888886
No 222
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.51 E-value=3.6e-08 Score=75.13 Aligned_cols=57 Identities=11% Similarity=0.017 Sum_probs=45.7
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEee-CCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICA-EPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~-~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+ +|| ++||+|++|||++|.+..+ +...+... .....+++|.|.
T Consensus 39 ~gv~V~~V~~~spA~-agl-----------~~GD~I~~vng~~v~~~~~---~~~~~~~~~~g~~v~l~v~R~ 96 (107)
T 2h2b_A 39 TSIVISDVLKGGPAE-GQL-----------QENDRVAMVNGVSMDNVEH---AFAVQQLRKSGKNAKITIRRK 96 (107)
T ss_dssp CCEEEEEECTTSTTB-TTB-----------CTTCEEEEETTEECTTCCH---HHHHHHHHTCCSEEEEEEEEE
T ss_pred CCEEEEEECCCCchh-hCC-----------CCCCEEEEECCEECCCccH---HHHHHHhhCCCCEEEEEEEEC
Confidence 599999999999999 999 9999999999999999876 33333322 334467888875
No 223
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.51 E-value=2.4e-08 Score=75.94 Aligned_cols=59 Identities=20% Similarity=0.235 Sum_probs=45.6
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | ++||+|++|||++|.+... .....++... ....+++|.|.
T Consensus 38 ~gv~V~~V~~~spA~~aG~L-----------~~GD~I~~vng~~v~~~~~-~~~~~~l~~~-g~~v~l~v~R~ 97 (105)
T 1wha_A 38 AGIFVSRIAEGGAAHRAGTL-----------QVGDRVLSINGVDVTEARH-DHAVSLLTAA-SPTIALLLERE 97 (105)
T ss_dssp CSCEEEECCTTSSHHHHSSC-----------CTTCEEEEESSCBCTTCCH-HHHHHHHTSC-CSCEEEEEEEC
T ss_pred CCEEEEEeCCCCHHHHcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHcC-CCeEEEEEEEC
Confidence 699999999999999999 8 9999999999999988431 1133333322 44578888885
No 224
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.49 E-value=2.7e-08 Score=75.49 Aligned_cols=60 Identities=15% Similarity=0.138 Sum_probs=45.5
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.+++|.+|.+++||+++| | ++||+|++|||++|.+... ......+.. .....+++|.|.+
T Consensus 38 ~~v~V~~V~~~spA~~aG~l-----------~~GD~I~~vng~~v~~~~~-~~~~~~~~~-~g~~v~l~v~R~g 98 (104)
T 2djt_A 38 TPLAVRGLLKDGPAQRCGRL-----------EVGDLVLHINGESTQGLTH-AQAVERIRA-GGPQLHLVIRRPL 98 (104)
T ss_dssp CCCEEEEECTTCHHHHHCSC-----------CTTCBEEEETTEECTTCCH-HHHHHHHHH-TCSEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHc-CCCeEEEEEEECC
Confidence 689999999999999999 8 9999999999999998641 112222222 3345788888753
No 225
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.49 E-value=2e-08 Score=75.90 Aligned_cols=57 Identities=26% Similarity=0.251 Sum_probs=44.5
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCC--CCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSC--LSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~--d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++|| ++||+|++|||++|.+.. | +..++.. .....+++++|.
T Consensus 30 ~g~~V~~V~~~spA~~aGl-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~~-~g~~v~l~v~r~ 88 (102)
T 2d90_A 30 KGQIIKDIEPGSPAEAAGL-----------KNNDLVVAVNGKSVEALDHDG---VVEMIRK-GGDQTTLLVLDK 88 (102)
T ss_dssp SSEEEECCCTTSTTTTTTC-----------CTTCEEEEESSCBCTTSCHHH---HHHHHHH-STTEEEEEECST
T ss_pred CCEEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHc-CCCEEEEEEEEC
Confidence 6999999999999999999 999999999999999863 3 3333322 234567777664
No 226
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.49 E-value=4.8e-08 Score=74.61 Aligned_cols=59 Identities=25% Similarity=0.157 Sum_probs=45.5
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | ++||+|++|||+++.+... .....++.. .....++++.|.
T Consensus 42 ~gv~V~~V~~~spA~~aG~L-----------~~GD~I~~vng~~v~~~~~-~~~~~~~~~-~g~~v~l~v~R~ 101 (108)
T 1q7x_A 42 GGIYVKAVIPQGAAESDGRI-----------HKGDRVLAVNGVSLEGATH-KQAVETLRN-TGQVVHLLLEKG 101 (108)
T ss_dssp CCCBEEEECTTSTHHHHTCC-----------CSSCEEEEETTEECBSCTT-SHHHHHHHH-TTSEEEEEEECC
T ss_pred CCEEEEEECCCChHHHCCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHc-CCCeEEEEEEeC
Confidence 699999999999999999 8 9999999999999996542 113333332 345577888875
No 227
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.48 E-value=4e-08 Score=76.37 Aligned_cols=59 Identities=19% Similarity=0.201 Sum_probs=45.4
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | ++||+|++|||+++.+... .+...++... ....+++|+|.
T Consensus 53 ~gv~V~~V~~gspA~~aG~L-----------~~GD~Il~VNg~~v~~~~~-~~~~~~l~~~-~~~v~L~v~R~ 112 (118)
T 3b76_A 53 LPIYVISVEPGGVISRDGRI-----------KTGDILLNVDGVELTEVSR-SEAVALLKRT-SSSIVLKALEV 112 (118)
T ss_dssp CCEEEEEECTTSHHHHHCSS-----------CTTCEEEEETTEEGGGSCH-HHHHHHHHSC-CSEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHCCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHcC-CCeEEEEEEEC
Confidence 689999999999999999 8 9999999999999994431 1133344333 45578888874
No 228
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.48 E-value=3.9e-08 Score=77.61 Aligned_cols=58 Identities=21% Similarity=0.210 Sum_probs=46.2
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccC--CCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSF--SCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~--~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||+++| | ++||+|++|||++|.+ ..+ +..++. ......+++|+|++
T Consensus 65 ~gv~V~~V~~~spA~~aG~L-----------~~GD~Il~vng~~v~~~~~~~---~~~~l~-~~~~~v~l~v~r~~ 125 (128)
T 1nf3_C 65 PGIFISRLVPGGLAQSTGLL-----------AVNDEVLEVNGIEVSGKSLDQ---VTDMMI-ANSRNLIITVRPAN 125 (128)
T ss_dssp EEEEEEEECTTCHHHHHTCC-----------CTTCEEEEETTEESTTCCHHH---HHHHHH-HTTTSEEEEEECCC
T ss_pred CCEEEEEECCCCHHHHCCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHH-cCCCeEEEEEEECC
Confidence 589999999999999999 7 9999999999999944 444 444444 33456899998864
No 229
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.48 E-value=5.8e-08 Score=83.34 Aligned_cols=60 Identities=23% Similarity=0.166 Sum_probs=47.9
Q ss_pred CCCCcEEEeeCCCChhhhcCCCccccCCCCCCcCC-cEEEEECCEEccCCCCCCCceeEEEe-eCCCCceEEEEeC
Q 019504 266 VGNGALVLQVPGNSLAAKAGILPTTRGFAGNIILG-DIIVAVNNKPVSFSCLSIPSRIYLIC-AEPNQDHLTCLKS 339 (340)
Q Consensus 266 ~~~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~G-Dvi~~i~g~~v~~~~d~~~~~~~~~~-~~~~~~~~~~~~~ 339 (340)
-+.|++|.+|.++|||++||| ++| |+|++|||++|.+..| +...+.. ......+++++|+
T Consensus 14 ~~~G~~V~~V~~~SpA~~AGL-----------~~G~D~I~~ing~~v~~~~~---~~~~~~~~~~g~~v~l~v~R~ 75 (209)
T 3rle_A 14 GTEGYHVLRVQENSPGHRAGL-----------EPFFDFIVSINGSRLNKDND---TLKDLLKANVEKPVKMLIYSS 75 (209)
T ss_dssp SSEEEEEEEECTTSHHHHTTC-----------CTTTEEEEEETTEECCSSSS---HHHHHHHHTTTSCEEEEEEET
T ss_pred CCCEEEEEEECCCCHHHHCCC-----------CcCCeEEEEECCEECcCHHH---HHHHHHhcCCCCEEEEEEEec
Confidence 347999999999999999999 998 9999999999999987 3333332 3344577777774
No 230
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.48 E-value=4.3e-08 Score=71.93 Aligned_cols=57 Identities=26% Similarity=0.261 Sum_probs=42.3
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEe-eCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLIC-AEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~-~~~~~~~~~~~~~~ 340 (340)
.|++|..| ++|||+ +|| ++||+|++|||++|.+. .| +...+.. ......++++.|.+
T Consensus 27 ~~~~v~~v-~~spA~-aGl-----------~~GD~I~~vng~~v~~~~~~~---~~~~l~~~~~g~~v~l~v~R~g 86 (88)
T 3bpu_A 27 GGQRVKQI-VDSPRS-RGL-----------KEGDLIVEVNKKNVQALTHNQ---VVDMLVESPKGSEVTLLVQRQT 86 (88)
T ss_dssp SSEEEEEC-CC--CC-TTC-----------CTTCEEEEETTEECTTSCHHH---HHHHHHTSCTTCEEEEEEEEEC
T ss_pred CcEEEEEe-cCChhH-hCC-----------CCCCEEEEECCEEcCCCCHHH---HHHHHHhCCCCCEEEEEEEeCC
Confidence 58899888 899999 999 99999999999999987 44 4444432 23445788888863
No 231
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.48 E-value=5.2e-08 Score=75.18 Aligned_cols=58 Identities=24% Similarity=0.244 Sum_probs=45.4
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.+++||+++|| ++||+|++|||++|.+..+ .....++. ......++|+|.
T Consensus 41 ~gv~V~~V~~~s~A~~aGL-----------~~GD~Il~vng~~v~~~~~-~~~~~~~~--~~~~v~l~v~r~ 98 (114)
T 1x5n_A 41 PGIFISHVKPGSLSAEVGL-----------EIGDQIVEVNGVDFSNLDH-KEAVNVLK--SSRSLTISIVAA 98 (114)
T ss_dssp CSEEEEEECTTSTTTTTTC-----------CTTCEEEEETTEETTSCCT-THHHHHHH--HCSSEEEEECSS
T ss_pred CCEEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHh--cCCeEEEEEEcC
Confidence 6999999999999999999 9999999999999999874 11222222 123578888875
No 232
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.48 E-value=2e-08 Score=76.05 Aligned_cols=59 Identities=8% Similarity=0.128 Sum_probs=44.3
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.+++|.+|.++|||+++|| ++||+|++|||+++.+..+ ......+.. .....+++|.|.
T Consensus 29 ~~v~V~~V~~~spA~~aGL-----------~~GD~I~~ing~~v~~~~~-~~~~~~~~~-~g~~v~l~v~R~ 87 (103)
T 1wf7_A 29 MPLTISSLKDGGKASQAHV-----------RIGDVVLSIDGISAQGMTH-LEAQNKIKA-CTGSLNMTLQRA 87 (103)
T ss_dssp EEEEECCCCTTCHHHHTTC-----------CTTCBEEEETTEECSSCCH-HHHHHHHHH-CSSEEEEEECCC
T ss_pred CCEEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHc-CCCeEEEEEEeC
Confidence 4689999999999999999 9999999999999998742 112222222 234467787775
No 233
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.48 E-value=3.3e-08 Score=72.98 Aligned_cols=37 Identities=35% Similarity=0.418 Sum_probs=35.0
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSC 315 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~ 315 (340)
.|++|.+|.++|||+++|| ++||+|++|||+++.+..
T Consensus 27 ~g~~V~~V~~~spA~~aGL-----------~~GD~I~~ing~~v~~~~ 63 (91)
T 1g9o_A 27 LGQYIRLVEPGSPAEKAGL-----------LAGDRLVEVNGENVEKET 63 (91)
T ss_dssp SSEEEEEECTTSHHHHTTC-----------CTTCEEEEETTEECTTCC
T ss_pred CCEEEEEECCCCHHHHCCC-----------CCCCEEEEECCEECCCCC
Confidence 6999999999999999999 999999999999999864
No 234
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.47 E-value=4.7e-08 Score=74.50 Aligned_cols=57 Identities=25% Similarity=0.112 Sum_probs=45.0
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.+++|.+|.++|||+++|| ++||+|++|||++|.+. .| +..++.. .....++++.|.
T Consensus 43 p~~~V~~v~~~spA~~aGl-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~~-~g~~v~l~v~r~ 101 (107)
T 3qe1_A 43 PLQHVSAVLPGGAADRAGV-----------RKGDRILEVNGVNVEGATHKQ---VVDLIRA-GEKELILTVLSV 101 (107)
T ss_dssp CCEEEEEECTTSHHHHHTC-----------CTTCEEEEETTEECTTCCHHH---HHHHHHH-CSSEEEEEEECS
T ss_pred CceEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHc-CCCEEEEEEEcC
Confidence 4567999999999999999 99999999999999944 44 4444443 345678888875
No 235
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.47 E-value=1.6e-08 Score=75.51 Aligned_cols=56 Identities=25% Similarity=0.172 Sum_probs=42.6
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEcc--CCCCCCCceeEEEeeCCCCceEEEE
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVS--FSCLSIPSRIYLICAEPNQDHLTCL 337 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~--~~~d~~~~~~~~~~~~~~~~~~~~~ 337 (340)
.+.+|.+|.++|||++||| ++||+|++|||++|. +.+| +..++......+..|.++
T Consensus 39 ~~~~I~~V~~gSpA~~AGL-----------~~GD~I~~Ing~~v~~~s~~d---v~~~i~~~~~~g~~v~LL 96 (101)
T 3qik_A 39 KAVVVKSVQRGSLAEVAGL-----------QVGRKIYSINEDLVFLRPFSE---VESILNQSFCSRRPLRLL 96 (101)
T ss_dssp TEEEEEEECTTSHHHHHTC-----------CTTCBEEEETTEESTTSCHHH---HHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEEECCCCHHHHcCC-----------CCCCEEEEECCEEcCcCCHHH---HHHHHHHhhccCCeEEEE
Confidence 5889999999999999999 999999999999985 7766 555555421223444443
No 236
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.47 E-value=4.3e-08 Score=77.69 Aligned_cols=58 Identities=21% Similarity=0.163 Sum_probs=46.6
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEee-CCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLICA-EPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~~-~~~~~~~~~~~~ 339 (340)
.|++|.+|.+++||+++| | ++||+|++|||+++.+. .| +..++... .....+++|.|.
T Consensus 65 ~gv~V~~V~~gspA~~aG~L-----------~~GD~Il~ing~~v~~~~~~~---~~~~l~~~~~g~~v~l~v~R~ 126 (131)
T 1wfg_A 65 LCAFITKVKKGSLADTVGHL-----------RPGDEVLEWNGRLLQGATFEE---VYNIILESKPEPQVELVVSRS 126 (131)
T ss_dssp EEEEEEEECTTSHHHHTSCC-----------CTTCEEEEETTEECTTCCHHH---HHHHHHHTSSSSEEEEEEEEE
T ss_pred CCEEEEEECCCChHHHcCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHhcCCCCEEEEEEEcC
Confidence 489999999999999999 8 99999999999999875 33 44444443 335578888885
No 237
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.46 E-value=2.7e-08 Score=77.04 Aligned_cols=59 Identities=22% Similarity=0.227 Sum_probs=45.0
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.+++||+++| | ++||+|++|||++|.+... ......+.... ...+++|.|.
T Consensus 43 ~gv~V~~V~~~spA~~aG~L-----------~~GD~I~~vng~~v~~~~~-~~~~~~l~~~~-~~v~l~v~R~ 102 (116)
T 2dm8_A 43 NAIVIHEVYEEGAAARDGRL-----------WAGDQILEVNGVDLRNSSH-EEAITALRQTP-QKVRLVVYRD 102 (116)
T ss_dssp SSEECCCCCSSSHHHHHTCC-----------CTTCEEEEETTEECSSSCH-HHHHHHHHTCC-SEEEEEEECC
T ss_pred CCEEEEEECCCChHHhCCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHhCC-CeEEEEEEeC
Confidence 599999999999999999 8 9999999999999998531 11333332222 4578888875
No 238
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.46 E-value=1.9e-08 Score=77.28 Aligned_cols=57 Identities=16% Similarity=0.074 Sum_probs=45.7
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEcc--CCCCCCCceeEEEeeCCCCceEEEEe
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVS--FSCLSIPSRIYLICAEPNQDHLTCLK 338 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~--~~~d~~~~~~~~~~~~~~~~~~~~~~ 338 (340)
.+++|..|.+++||+++|| ++||+|++|||++|. +..| +..++........+++|+|
T Consensus 36 ~~v~V~~V~~~spA~~aGL-----------~~GD~Il~InG~~v~~~~~~d---~~~~i~~~~~~~v~l~V~~ 94 (111)
T 1vae_A 36 TPVQVHFLDPHCSASLAGA-----------KEGDYIVSIQGVDCKWLTVSE---VMKLLKSFGGEEVEMKVVS 94 (111)
T ss_dssp SSCEECCCCTTSSHHHHHC-----------CTTCEEEEETTEECSSCCHHH---HHHHHHHTTTSEECEEEEC
T ss_pred CCEEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHhCCCceEEEEEEe
Confidence 4789999999999999999 999999999999999 6676 4444444333347888876
No 239
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.46 E-value=2.9e-08 Score=77.02 Aligned_cols=56 Identities=14% Similarity=0.176 Sum_probs=44.7
Q ss_pred CcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEcc--CCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 269 GALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVS--FSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 269 g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~--~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
+++|.+|.+++||+++| | ++||+|++|||++|. +..| +..++. ......+++|+|.
T Consensus 43 ~~~V~~V~~~spA~~aG~l-----------~~GD~Il~Ing~~v~~~~~~~---~~~~l~-~~g~~v~l~v~r~ 101 (117)
T 1v62_A 43 VITIDRIKPASVVDRSGAL-----------HPGDHILSIDGTSMEHCSLLE---ATKLLA-SISEKVRLEILPV 101 (117)
T ss_dssp EEEEEECCTTSHHHHHTCC-----------CTTCBEEEETTEETTSCCHHH---HHHHHH-SCSSEEEEEECCB
T ss_pred CEEEEEECCCCHHHHcCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHH-hCCCeEEEEEEEC
Confidence 49999999999999999 8 999999999999994 4555 444444 2445577888775
No 240
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.45 E-value=4.9e-08 Score=75.15 Aligned_cols=59 Identities=15% Similarity=0.157 Sum_probs=44.8
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | ++||+|++|||++|.+... ......+.. .....+++|.|.
T Consensus 49 ~gv~V~~V~~~spA~~aG~L-----------~~GD~Il~Vng~~v~~~~~-~~~~~~l~~-~g~~v~l~v~R~ 108 (112)
T 2r4h_A 49 MDLYVLRLAEDGPAERSGKM-----------RIGDEILEINGETTKNMKH-SRAIELIKN-GGRRVRLFLKRG 108 (112)
T ss_dssp CCEEEEEECTTSHHHHTTCC-----------CTTCEEEEETTEECTTCCH-HHHHHHHHT-TTTEEEEEEECC
T ss_pred CCEEEEEECCCChHHHcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHc-CCCeEEEEEEeC
Confidence 699999999999999999 8 9999999999999988642 112222222 334467888875
No 241
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.45 E-value=3.2e-08 Score=77.01 Aligned_cols=60 Identities=20% Similarity=0.193 Sum_probs=44.0
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.+++||+++| | ++||+|++|||++|.+... .....++.........+++.|.
T Consensus 42 ~gv~V~~V~~~spA~~aG~L-----------~~GD~Il~ing~~v~~~~~-~~~~~~l~~~~~~~~~l~v~R~ 102 (119)
T 1x6d_A 42 KVITVHRVFPNGLASQEGTI-----------QKGNEVLSINGKSLKGTTH-HDALAILRQAREPRQAVIVTRK 102 (119)
T ss_dssp SSCEEEEECSSSHHHHHTSS-----------CTTCBCCEETTEECSSCCH-HHHHHHHHHTTSSSEEEEEEEC
T ss_pred CCEEEEEECCCChHHHcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHhCCCCeEEEEEEcC
Confidence 599999999999999999 8 9999999999999986442 1133333333333344677775
No 242
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.45 E-value=8.7e-08 Score=82.20 Aligned_cols=57 Identities=26% Similarity=0.148 Sum_probs=48.9
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcC-CcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIIL-GDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~-GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++|| ++ ||+|++|||+ |.+..| +..++.........++++|.
T Consensus 112 ~Gv~V~~V~~~spA~~aGl-----------~~~GD~I~~ing~-v~~~~~---l~~~l~~~~g~~v~l~v~r~ 169 (209)
T 3rle_A 112 NVWHVLEVESNSPAALAGL-----------RPHSDYIIGADTV-MNESED---LFSLIETHEAKPLKLYVYNT 169 (209)
T ss_dssp SCEEEEEECTTSHHHHHTC-----------CTTTEEEEEESSC-CCSSSC---HHHHHHHTTTSCEEEEEEET
T ss_pred cceEEEEeCCCChHHHCCC-----------CCCCCEEEECCCE-eCCHHH---HHHHHHhCCCCeEEEEEEEC
Confidence 6999999999999999999 99 9999999998 999988 66666665455577888775
No 243
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Probab=98.45 E-value=1.4e-06 Score=68.79 Aligned_cols=86 Identities=15% Similarity=0.156 Sum_probs=55.0
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEec-----CCceeEEEEEEEEeCC-------CCcEEEEEEe
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILAS-----DGVQKNFEGKLVGADR-------AKDLAVLKIE 125 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~-----~g~~~~~~a~v~~~d~-------~~DlAlL~v~ 125 (340)
...|.+|+++ ||||+|||+.... ..+.+-.. +.....+..+-+..++ ..|||||+++
T Consensus 26 ~CgGsLIs~~-~VLTAAHC~~~~~----------~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~ 94 (131)
T 1yph_C 26 FCGGSLINEN-WVVTAAHCGVTTS----------DVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLS 94 (131)
T ss_dssp EEEEEEEETT-EEEECGGGCCCTT----------SEEEESCSBTTCSSSCCEEEEEEEEEECTTCCTTTCCSCCEEEEES
T ss_pred EEEEEEeeCC-EEEECHHHCCCCC----------eEEEEeEccCCCCCCceEEEEEEEEEeCCCCCCCCCCCCEEEEEEC
Confidence 4889999987 9999999997521 12222111 1111233333333333 4699999998
Q ss_pred cCC---CCccceeecCCC-CCCCCCEEEEEecC
Q 019504 126 ASE---DLLKPINVGQSS-FLKVGQQCLAIGNP 154 (340)
Q Consensus 126 ~~~---~~~~~~~l~~~~-~~~~G~~v~~iG~p 154 (340)
.+- ..+.|+.|.... .+..|+.+++.||.
T Consensus 95 ~~~~~~~~v~picLp~~~~~~~~g~~~~v~GWG 127 (131)
T 1yph_C 95 TAASFSQTVSAVCLPSASDDFAAGTTCVTTGWG 127 (131)
T ss_dssp SCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESC
T ss_pred CcccCCCcCcceECCCcccCCCCCCEEEEEcCC
Confidence 763 346788886543 35689999999975
No 244
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.45 E-value=5.3e-08 Score=72.12 Aligned_cols=36 Identities=31% Similarity=0.393 Sum_probs=34.2
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFS 314 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~ 314 (340)
.|++|.+|.++|||+++|| ++||+|++|||++|.+.
T Consensus 35 ~g~~V~~V~~~spA~~aGL-----------~~GD~Il~vng~~v~~~ 70 (94)
T 3kzd_A 35 RRLYVNSVKETGLASKKGL-----------KAGDEILEINNRAADAL 70 (94)
T ss_dssp CEEEEEEECTTSHHHHTTC-----------CTTCEEEEETTEEGGGC
T ss_pred CCeEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCC
Confidence 5899999999999999999 99999999999999975
No 245
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.45 E-value=4.9e-08 Score=76.60 Aligned_cols=56 Identities=21% Similarity=0.165 Sum_probs=46.0
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEe-eCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLIC-AEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~-~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++ | ++||+|++|||++|.+..| +..++.. ......+++| |+
T Consensus 25 ~gv~V~~V~~~spA~~a-L-----------~~GD~Il~InG~~v~~~~d---l~~~l~~~~~g~~v~l~V-R~ 81 (125)
T 2hga_A 25 DGVQIDSVVPGSPASKV-L-----------TPGLVIESINGMPTSNLTT---YSAALKTISVGEVINITT-DQ 81 (125)
T ss_dssp CCEEEEEECSSSGGGGT-S-----------CTTCEEEEETTEECSSHHH---HHHHHTTCCTTCEEEEEE-TT
T ss_pred CceEEEEECCCChHHHh-c-----------CCCCEEEEECCEEcCCHHH---HHHHHHhcCCCCEEEEEE-EC
Confidence 79999999999999999 9 9999999999999999987 5655553 2333457777 65
No 246
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.45 E-value=4.1e-08 Score=75.62 Aligned_cols=60 Identities=17% Similarity=0.143 Sum_probs=46.4
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||+++| | ++||+|++|||+++.+... .....++.. .....+++|.|.+
T Consensus 35 ~g~~V~~V~~~s~A~~aG~l-----------~~GD~I~~vng~~v~~~~~-~~~~~~~~~-~g~~v~l~v~R~~ 95 (113)
T 2g5m_B 35 LGIFVKTVTEGGAAHRDGRI-----------QVNDLLVEVDGTSLVGVTQ-SFAASVLRN-TKGRVRFMIGRER 95 (113)
T ss_dssp EEEEEEECCTTSHHHHHTCS-----------CTTCBEEEETTEECSSCCH-HHHHHHHHH-SCSSCEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHhc-CCCeEEEEEEeCC
Confidence 699999999999999999 8 9999999999999987653 112222322 3455888888863
No 247
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.44 E-value=3.1e-08 Score=74.78 Aligned_cols=58 Identities=12% Similarity=0.153 Sum_probs=46.6
Q ss_pred CCcEEEeeCCCChhhh-cCCCccccCCCCCCcCCcEEEEECCEEc--cCCCCCCCceeEEEee-CCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAK-AGILPTTRGFAGNIILGDIIVAVNNKPV--SFSCLSIPSRIYLICA-EPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~-~gl~~~~~~~~~~l~~GDvi~~i~g~~v--~~~~d~~~~~~~~~~~-~~~~~~~~~~~~ 339 (340)
.+++|.+|.+++||++ +|| ++||+|++|||++| .+..| +..++... .....+++|+|.
T Consensus 37 ~~~~V~~V~~~spA~~~ggl-----------~~GD~I~~Ing~~v~~~~~~~---~~~~l~~~~~g~~v~l~v~R~ 98 (101)
T 2yt7_A 37 PTAVIANLLHGGPAERSGAL-----------SIGDRLTAINGTSLVGLPLAA---CQAAVRETKSQTSVTLSIVHC 98 (101)
T ss_dssp CCEEEEEECTTSTTGGGSSC-----------CTTCEEEEESSCBCTTSCHHH---HHHHHHHTTTSSEEEEEECCC
T ss_pred cCEEEEEECCCCHHHHcCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHhCCCCCeEEEEEEeC
Confidence 4799999999999999 568 99999999999999 66666 55666553 445578888774
No 248
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.44 E-value=5.1e-08 Score=72.76 Aligned_cols=60 Identities=22% Similarity=0.208 Sum_probs=45.4
Q ss_pred CCCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 267 GNGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 267 ~~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
..|++|.+|.+++||+++| | ++||+|++|||+++.+... ......+.. .....+++|.|+
T Consensus 32 ~~~~~V~~v~~~s~A~~aG~l-----------~~GD~I~~vng~~v~~~~~-~~~~~~~~~-~~~~v~l~v~r~ 92 (97)
T 2iwn_A 32 PSGIFVKSITKSSAVEHDGRI-----------QIGDQIIAVDGTNLQGFTN-QQAVEVLRH-TGQTVLLTLMRR 92 (97)
T ss_dssp CCCCEEEEECTTCHHHHHCCC-----------CTTCEEEEETTEECTTSCH-HHHHHHHHT-CCSEEEEEEEEE
T ss_pred CCCEEEEEeCCCChHHhCCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHc-CCCeEEEEEEeC
Confidence 3699999999999999999 8 9999999999999997642 112222222 334567888875
No 249
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.44 E-value=4.9e-08 Score=74.28 Aligned_cols=60 Identities=17% Similarity=0.151 Sum_probs=45.2
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||+++| | ++||+|++|||+++.+... ......+. ......+++|.|.+
T Consensus 38 ~gv~V~~V~~~spA~~aG~L-----------~~GD~I~~ing~~v~~~~~-~~~~~~~~-~~g~~v~l~v~R~~ 98 (106)
T 3axa_A 38 LGIYVKSVVKGGAADVDGRL-----------AAGDQLLSVDGRSLVGLSQ-ERAAELMT-RTSSVVTLEVAKQG 98 (106)
T ss_dssp EEEEEEEEBTTSHHHHHCCC-----------CTTCEEEEETTEECTTCCH-HHHHHHHH-TCCSEEEEEEECCC
T ss_pred CCEEEEEECCCCHHHHcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHH-cCCCeEEEEEEeCC
Confidence 689999999999999999 8 9999999999999997553 11222222 23345778888753
No 250
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.44 E-value=7e-08 Score=71.08 Aligned_cols=58 Identities=17% Similarity=0.121 Sum_probs=43.5
Q ss_pred CCcEEEeeCCCChhhhc-CCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEe
Q 019504 268 NGALVLQVPGNSLAAKA-GILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLK 338 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~-gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~ 338 (340)
.|++|.+|.++|||+++ || ++||+|++|||++|.+... ......+. ......++++.|
T Consensus 30 ~g~~V~~V~~~spA~~aggl-----------~~GD~I~~ing~~v~~~~~-~~~~~~~~-~~~~~v~l~v~r 88 (90)
T 1qav_A 30 MPILISKIFKGLAADQTEAL-----------FVGDAILSVNGEDLSSATH-DEAVQALK-KTGKEVVLEVKY 88 (90)
T ss_dssp EEEEEEEECTTSHHHHTTCC-----------CTTEEEEEETTEECTTCCH-HHHHHHHH-TCCSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHH-hCCCeEEEEEEE
Confidence 58999999999999999 88 9999999999999998753 11222222 223446777766
No 251
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.43 E-value=9.3e-08 Score=72.36 Aligned_cols=59 Identities=17% Similarity=0.161 Sum_probs=44.4
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | ++||+|++|||++|.+..+ ......+. ......++++.|.
T Consensus 35 ~gv~V~~V~~~spA~~aG~l-----------~~GD~I~~vng~~v~~~~~-~~~~~~~~-~~~~~v~l~v~r~ 94 (104)
T 3i4w_A 35 EGIFISFILAGGPADLSGEL-----------RKGDQILSVNGVDLRNASH-EQAAIALK-NAGQTVTIIAQYK 94 (104)
T ss_dssp CCEEEEEECTTSHHHHHCCC-----------CTTEEEEEETTEECTTCCH-HHHHHHHH-TSCSEEEEEEEEC
T ss_pred CCEEEEEECCCChHHhcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHH-cCCCeEEEEEEEC
Confidence 499999999999999999 8 9999999999999987664 11222222 2334467777774
No 252
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.43 E-value=4.3e-08 Score=75.12 Aligned_cols=59 Identities=22% Similarity=0.182 Sum_probs=44.7
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | ++||+|++|||++|.+... ......+.. .....+++|.|.
T Consensus 36 ~gv~V~~V~~~spA~~aG~L-----------~~GD~I~~vng~~v~~~~~-~~~~~~~~~-~~~~v~l~v~R~ 95 (110)
T 1um1_A 36 PGLYIQTLLPGSPAAADGRL-----------SLGDRILEVNGSSLLGLGY-LRAVDLIRH-GGKKMRFLVAKS 95 (110)
T ss_dssp SSEEEEEECTTSHHHHHSCC-----------CTTCEEEEESSCBCSSCCH-HHHHHHHHT-CCSEEEEEEECC
T ss_pred CCEEEEEECCCChHHHcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHc-CCCeEEEEEEeC
Confidence 699999999999999999 8 9999999999999987553 112222222 234467888875
No 253
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.42 E-value=7e-08 Score=71.83 Aligned_cols=58 Identities=21% Similarity=0.126 Sum_probs=44.7
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||++ || ++||+|++|||++|.+..+ ......+. ......+++|.|.
T Consensus 35 ~gv~V~~V~~~spA~~-gL-----------~~GD~I~~vng~~v~~~~~-~~~~~~~~-~~~~~v~l~v~R~ 92 (95)
T 1mfg_A 35 DGIFVTRVQPEGPASK-LL-----------QPGDKIIQANGYSFINIEH-GQAVSLLK-TFQNTVELIIVRE 92 (95)
T ss_dssp CCEEEEEECTTSTTTT-TC-----------CTTCEEEEETTEECTTCBH-HHHHHHHH-HCCSEEEEEEEEE
T ss_pred CCEEEEEECCCCchhh-CC-----------CCCCEEEEECCEEcCCCCH-HHHHHHhh-cCCCeEEEEEEeC
Confidence 6999999999999999 99 9999999999999998763 11222222 3344577888875
No 254
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.42 E-value=1.1e-07 Score=72.48 Aligned_cols=60 Identities=20% Similarity=0.230 Sum_probs=46.0
Q ss_pred CCCcEEEeeCCCChhhhc-CCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 267 GNGALVLQVPGNSLAAKA-GILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 267 ~~g~~V~~v~~~spa~~~-gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
..|++|.+|.+++||+++ || ++||+|++|||++|.+... .....++. .......++|+|.
T Consensus 40 ~~gv~V~~V~~~spA~~aggL-----------~~GD~Il~vng~~v~~~~~-~~~~~~~~-~~~~~v~l~v~R~ 100 (107)
T 1uhp_A 40 SEGIFVSKIVDSGPAAKEGGL-----------QIHDRIIEVNGRDLSRATH-DQAVEAFK-TAKEPIVVQVLRR 100 (107)
T ss_dssp SCCCEEEEECSSSHHHHTTCC-----------CSSCEEEEETTEECTTCCH-HHHHHHHH-HCCSSEEEEEEEC
T ss_pred CCCEEEEEeCCCChHHHcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHH-cCCCcEEEEEEeC
Confidence 369999999999999999 89 9999999999999987653 11222222 2345688888885
No 255
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.41 E-value=1.1e-07 Score=73.99 Aligned_cols=58 Identities=14% Similarity=0.152 Sum_probs=44.8
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEe-eCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLIC-AEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~-~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | ++||+|++|||++|.+..+ ....... .......+++.|.
T Consensus 38 ~gv~V~~V~~~spA~~aG~L-----------~~GD~I~~vng~~v~~~~~---~~~~~~~~~~~~~v~l~v~r~ 97 (119)
T 1tp5_A 38 EGIFISFILAGGPADLSGEL-----------RKGDQILSVNGVDLRNASH---EQAAIALKNAGQTVTIIAQYK 97 (119)
T ss_dssp CCEEEEEECTTSHHHHHSCC-----------CTTEEEEEETTEECTTCCH---HHHHHHHHTSCSEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCC-----------CCCCEEEEECCEECCCCCH---HHHHHHHHcCCCeEEEEEEEC
Confidence 699999999999999999 8 9999999999999998864 2222221 2334467777764
No 256
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.41 E-value=5.8e-08 Score=74.03 Aligned_cols=59 Identities=19% Similarity=0.117 Sum_probs=45.6
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.+++||+++| | ++||+|++|||++|.+... .....++.. .....+++|.|.
T Consensus 40 ~gv~V~~V~~~spA~~aG~L-----------~~GD~I~~vng~~v~~~~~-~~~~~~~~~-~~~~v~l~v~R~ 99 (107)
T 1wf8_A 40 LGIFVKTVTEGGAAQRDGRI-----------QVNDQIVEVDGISLVGVTQ-NFAATVLRN-TKGNVRFVIGRE 99 (107)
T ss_dssp EEEEEEEECTTCHHHHHCSS-----------CTTCBEEEETTEECBSCCH-HHHHHHHHH-CCSEEEEEEEEE
T ss_pred CCEEEEEeCCCCHHHHcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHhc-CCCeEEEEEEeC
Confidence 699999999999999999 8 9999999999999997653 112222322 345578888875
No 257
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.41 E-value=6e-08 Score=81.97 Aligned_cols=58 Identities=26% Similarity=0.180 Sum_probs=46.2
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccC--CCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSF--SCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~--~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||+++| | ++||+|++|||++|.+ ..+ +...+.. ......++|.|++
T Consensus 130 ~gv~V~~V~~gs~A~~aG~L-----------~~GD~Il~Vng~~v~~~~~~~---~~~~l~~-~~~~v~l~v~R~~ 190 (196)
T 3gsl_A 130 NSIYVTKIIEGGAAHKDGRL-----------QIGDKILAVNSVGLEDVMHED---AVAALKN-TYDVVYLKVAKPS 190 (196)
T ss_dssp CCEEEEEECTTSHHHHHCCC-----------CTTCEEEEETTEECSSCBHHH---HHHHHHS-CCEEEEEEEEEES
T ss_pred CCEEEEEECCCChHHhcCCC-----------CCCCEEEEECCCcCCCCCHHH---HHHHHHc-CCCeEEEEEeCCC
Confidence 699999999999999999 8 9999999999999998 444 4444433 3345777888753
No 258
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.41 E-value=2.9e-08 Score=78.27 Aligned_cols=58 Identities=19% Similarity=0.105 Sum_probs=44.5
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccC--CCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSF--SCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~--~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++|| ++||+|++|||++|.+ ..| +..++.........+++.|+
T Consensus 33 ~gv~V~~V~~~spA~~aGl-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~~~~~~~~~l~v~R~ 92 (128)
T 2kjd_A 33 PGQFIRSVDPDSPAEASGL-----------RAQDRIVEVNGVCMEGKQHGD---VVSAIRAGGDETKLLVVDRE 92 (128)
T ss_dssp CSEEEEEECTTSHHHHHTC-----------CTTCEEEEETTEECTTCCHHH---HHHHHHTTCSEEEEEEECHH
T ss_pred CCEEEEEeCCCChHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHhCCCCEEEEEEEeC
Confidence 5999999999999999999 9999999999999998 555 44444433222234666653
No 259
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.41 E-value=7.7e-08 Score=73.30 Aligned_cols=60 Identities=13% Similarity=0.102 Sum_probs=44.9
Q ss_pred CCcEEEeeCCCChhhhcC--CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeC---CCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG--ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAE---PNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g--l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~---~~~~~~~~~~~ 339 (340)
.+++|.+|.++|||+++| | ++||+|++|||++|.+..+ ......+.... ....+++|.|+
T Consensus 43 ~~~~V~~V~~~spA~~aG~rL-----------~~GD~Il~ing~~v~~~~~-~~~~~~i~~~~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 43 MPVIVSRVAPGTPADLCVPRL-----------NEGDQVVLINGRDIAEHTH-DQVVLFIKASCERHSGELMLLVRPN 107 (107)
T ss_dssp EEEEEEEECTTSHHHHSSSCC-----------CTTCEEEEETTEECTTCCH-HHHHHHHHCGGGSBTTBEEEEEECC
T ss_pred CCeEEEEECCCCchHHcCCcc-----------CCCCEEEEECCEECCCCCH-HHHHHHHHhccccCCcEEEEEEEcC
Confidence 479999999999999999 8 9999999999999998753 11222333222 13578888774
No 260
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.41 E-value=6.6e-08 Score=74.66 Aligned_cols=56 Identities=21% Similarity=0.209 Sum_probs=44.0
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEc--cCCCCCCCceeEEEeeCCCCceEEEEe
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPV--SFSCLSIPSRIYLICAEPNQDHLTCLK 338 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v--~~~~d~~~~~~~~~~~~~~~~~~~~~~ 338 (340)
.+++|.+|.++|||+++| | ++||+|++|||++| .+..| +..++.... +..+++|.+
T Consensus 50 ~~~~V~~V~~gspA~~aG~L-----------~~GD~I~~Ing~~v~~~~~~~---~~~~l~~~~-~~v~l~v~~ 108 (114)
T 2gzv_A 50 PCLYIVQVFDNTPAALDGTV-----------AAGDEITGVNGRSIKGKTKVE---VAKMIQEVK-GEVTIHYNK 108 (114)
T ss_dssp CCEEEEEECTTSHHHHHCCC-----------CTTCEEEEETTEECTTCCHHH---HHHHHHHCC-SEEEEEEEC
T ss_pred CCEEEEEECCCChHHHCCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHcCC-CeEEEEEEe
Confidence 489999999999999999 8 99999999999999 66665 444443322 346777765
No 261
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.40 E-value=5.2e-08 Score=72.19 Aligned_cols=59 Identities=17% Similarity=0.135 Sum_probs=44.2
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | ++||+|++|||+++.+... ......+.. .....+++|.|.
T Consensus 30 ~~~~V~~V~~~spA~~aGgl-----------~~GD~I~~vng~~v~~~~~-~~~~~~~~~-~~~~v~l~v~r~ 89 (93)
T 2dkr_A 30 SPIYISRVIPGGVADRHGGL-----------KRGDQLLSVNGVSVEGEQH-EKAVELLKA-AQGSVKLVVRSG 89 (93)
T ss_dssp CCCEEEEECTTSHHHHHCCC-----------CTTCBEEEETTEECTTSCH-HHHHHHHHH-CCSEEEEEECCC
T ss_pred CCEEEEEECCCCHHHHcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHh-CCCcEEEEEEeC
Confidence 699999999999999996 8 9999999999999997531 112222322 234477888775
No 262
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.40 E-value=3.4e-08 Score=77.82 Aligned_cols=60 Identities=22% Similarity=0.269 Sum_probs=47.5
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccC--CCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSF--SCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~--~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.+++|.+|.++|||+++|| |++||+|++|||++|.+ ..| +..++.........+++.|++
T Consensus 33 ~~~~V~~V~~~spA~~aGl----------l~~GD~I~~ing~~v~~~~~~~---~~~~l~~~~g~~v~l~v~R~g 94 (127)
T 1b8q_A 33 PPVIISDLIRGGAAEQSGL----------IQAGDIILAVNDRPLVDLSYDS---ALEVLRGIASETHVVLILRGP 94 (127)
T ss_dssp SCEEECCCSSSSSHHHHSS----------CCTTTCCCEETTEECSSSCHHH---HHHHHHSCCSSCEEEEEECCC
T ss_pred CCEEEEEeCCCCHHHHcCC----------CCCCCEEEEECCEECCCCCHHH---HHHHHHhCCCCeEEEEEEeCC
Confidence 5899999999999999997 48899999999999998 555 444454433345778887753
No 263
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.40 E-value=3.9e-08 Score=77.60 Aligned_cols=57 Identities=19% Similarity=0.184 Sum_probs=45.1
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEcc---CCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVS---FSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~---~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.+++||+++| | ++||+|++|||++|. +..| ...++.. .....+++|.|.
T Consensus 54 ~gv~V~~V~~~spA~~aG~L-----------~~GD~Il~ing~~v~~~~~~~~---~~~~l~~-~~~~v~l~v~r~ 114 (128)
T 2db5_A 54 VDIFVKDVQPGSVADRDQRL-----------KENDQILAINHTPLDQNISHQQ---AIALLQQ-TTGSLRLIVARE 114 (128)
T ss_dssp EEEEEECCCTTSHHHHTCCC-----------CSSCBEEEESSCBCSTTSCHHH---HHHHHHH-CCSEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCC-----------CCCCEEEEECCEECCCCCCHHH---HHHHHHc-CCCeEEEEEEcC
Confidence 489999999999999999 8 999999999999998 4443 3333333 345578888875
No 264
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.40 E-value=3.2e-08 Score=74.81 Aligned_cols=60 Identities=15% Similarity=0.188 Sum_probs=45.4
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.+++||+++| | ++||+|++|||+++.+... ......+. ......+++|.|.+
T Consensus 36 ~~~~V~~V~~~spA~~aG~l-----------~~GD~I~~vng~~v~~~~~-~~~~~~~~-~~g~~v~l~v~R~~ 96 (103)
T 1wfv_A 36 MDLYVLRLAEDGPAIRNGRM-----------RVGDQIIEINGESTRDMTH-ARAIELIK-SGGRRVRLLLKRGT 96 (103)
T ss_dssp EEEECCCBCTTSHHHHHCSS-----------CTTCEEEEETTEECSSCCH-HHHHHHHH-HHCSEECEEEECTT
T ss_pred CCEEEEEECCCChHHHcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHH-cCCCeEEEEEEECC
Confidence 489999999999999999 8 9999999999999998642 11222222 23345788888753
No 265
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.39 E-value=2.7e-08 Score=78.06 Aligned_cols=58 Identities=14% Similarity=0.070 Sum_probs=46.5
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEcc--CCCCCCCceeEEEee-CCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVS--FSCLSIPSRIYLICA-EPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~--~~~d~~~~~~~~~~~-~~~~~~~~~~~~ 339 (340)
.+++|.+|.+++||+++| | ++||+|++|||++|. +..| +..++... .....+|+|.|+
T Consensus 49 ~~v~V~~V~~gspA~~aG~L-----------~~GD~Il~VnG~~v~~~s~~d---~~~~l~~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 49 PYLQISHLINKGAAASDGIL-----------QPGDVLISVGHANVLGYTLRE---FLKLLQNITIGTVLQIKAYRG 110 (126)
T ss_dssp TEEEECCCCTTSSGGGCSSS-----------CTTCBEEEESSSCCTTCCHHH---HHHHHTSCCSSCEEEEEEESS
T ss_pred CcEEEEEECCCCHHHHcCCC-----------CCCCEEEEECCEEcCCCCHHH---HHHHHhcCCCCCEEEEEEEEC
Confidence 478899999999999999 8 999999999999996 5666 55566553 334577888874
No 266
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.38 E-value=8.6e-08 Score=74.71 Aligned_cols=60 Identities=12% Similarity=0.093 Sum_probs=45.7
Q ss_pred CCcEEEeeCCCChhhhc-CCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKA-GILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~-gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||+++ || ++||+|++|||+++.+... .....++.. .....+++|+|.+
T Consensus 53 ~~~~V~~V~~~spA~~aggL-----------~~GD~Il~VnG~~v~~~~~-~~~~~~l~~-~~~~v~l~v~r~g 113 (120)
T 2iwo_A 53 VPIFIAMMHPTGVAAQTQKL-----------RVGDRIVTICGTSTEGMTH-TQAVNLLKN-ASGSIEMQVVAGG 113 (120)
T ss_dssp EEEEEEEECTTSHHHHHTCC-----------CTTCEEEEETTEECTTCBH-HHHHHHHHH-CCSEEEEEEECCT
T ss_pred CCEEEEEECCCCHHHHhCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHc-CCCeEEEEEEECC
Confidence 48999999999999999 88 9999999999999998642 112222322 3345788888863
No 267
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.38 E-value=4.3e-08 Score=74.93 Aligned_cols=60 Identities=20% Similarity=0.287 Sum_probs=45.9
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.+++||+++| | ++||+|++|||+++.+..- .+...++.....+..+++|.|.
T Consensus 44 ~g~~V~~v~~~spA~~aG~L-----------~~GD~Il~Vng~~v~~~~~-~~~~~~l~~~~~~~v~l~v~R~ 104 (108)
T 2d92_A 44 SVIVIRSLVADGVAERSGGL-----------LPGDRLVSVNEYCLDNTSL-AEAVEILKAVPPGLVHLGICSG 104 (108)
T ss_dssp EEEEEEEECTTCHHHHHTCC-----------CTTCEEEEESSCBCTTCCH-HHHHHHHHHSCSEEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHCCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHhCCCCeEEEEEEcC
Confidence 689999999999999999 8 9999999999999977431 1133444443334578888874
No 268
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.38 E-value=3e-08 Score=75.26 Aligned_cols=47 Identities=17% Similarity=0.149 Sum_probs=39.6
Q ss_pred CCCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEcc--CCCCCCCceeEEEee
Q 019504 267 GNGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVS--FSCLSIPSRIYLICA 327 (340)
Q Consensus 267 ~~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~--~~~d~~~~~~~~~~~ 327 (340)
..+++|.+|.+++||+++|| ++||+|++|||++|. +..| +..++...
T Consensus 47 ~~~~~V~~V~~~spA~~aGl-----------~~GD~I~~vng~~v~~~~~~~---~~~~l~~~ 95 (104)
T 2z17_A 47 EMFTLICKIQEDSPAHCAGL-----------QAGDVLANINGVSTEGFTYKQ---VVDLIRSS 95 (104)
T ss_dssp SCCEEEEEECTTSHHHHHTC-----------CTTCBCCEETTEECTTCCHHH---HHHHHHHT
T ss_pred CCCeEEEEECCCChHHHcCC-----------CCCCEEEEECCEEcCCCCHHH---HHHHHHhC
Confidence 46999999999999999999 999999999999999 5565 44444443
No 269
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.38 E-value=5.6e-08 Score=75.00 Aligned_cols=55 Identities=24% Similarity=0.243 Sum_probs=44.0
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCC--CCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSC--LSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~--d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++|| ++||+|++|||++|.+.. | +..++. .....++|.|.
T Consensus 44 ~gv~V~~V~~~spA~~aGL-----------~~GD~Il~Ing~~v~~~~~~~---~~~~l~---~~~v~l~v~R~ 100 (114)
T 2d8i_A 44 RRLYVNSVKETGLASKKGL-----------KAGDEILEINNRAADALNSSM---LKDFLS---QPSLGLLVRTY 100 (114)
T ss_dssp EEEEEEECCTTSSHHHHTC-----------CTTCCEEEESSCBGGGCCHHH---HHHHHT---SSEEEEEEEEC
T ss_pred CCEEEEEeCCCCHHHHcCC-----------CCCCEEEEECCEECCCcCHHH---HHHHHh---CCcEEEEEEEC
Confidence 4899999999999999999 999999999999999864 3 333332 23577888774
No 270
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.38 E-value=6.2e-08 Score=74.79 Aligned_cols=57 Identities=18% Similarity=0.072 Sum_probs=46.1
Q ss_pred CCcEEEeeCCCChhhh-cCCCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAK-AGILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~-~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.+++|.+|.++|||++ +|| ++||+|++|||++|.+. .| +..++.. .....+++|.|.
T Consensus 43 ~~~~V~~V~~~spA~~~agL-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~~-~g~~v~l~v~r~ 102 (114)
T 1uew_A 43 VPHKIGRIIDGSPADRCAKL-----------KVGDRILAVNGQSIINMPHAD---IVKLIKD-AGLSVTLRIIPQ 102 (114)
T ss_dssp CSCEEEEECTTCTTGGGSSC-----------CTTCBEEEETTBCTTTSCHHH---HHHHHHH-TTTEEEEEECCC
T ss_pred cCeEEEEECCCChHHHhCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHc-CCCeEEEEEEeC
Confidence 4779999999999999 999 99999999999999985 55 4445544 445577787775
No 271
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.37 E-value=7.3e-08 Score=76.12 Aligned_cols=58 Identities=19% Similarity=0.080 Sum_probs=46.0
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCC--CCCCceeEEEeeC-CCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSC--LSIPSRIYLICAE-PNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~--d~~~~~~~~~~~~-~~~~~~~~~~~ 339 (340)
.|++|.+|.+++||+++| | ++||+|++|||++|.+.. | +..++.... ....+++|.|.
T Consensus 43 ~~v~V~~V~~~spA~~aG~L-----------~~GD~Il~vng~~v~~~~~~~---~~~~l~~~~~g~~v~l~v~R~ 104 (129)
T 2kpk_A 43 EFLQIKSLVLDGPAALDGKM-----------ETGDVIVSVNDTCVLGHTHAQ---VVKIFQSIPIGASVDLELCRG 104 (129)
T ss_dssp EEEEEEEECTTSHHHHHSSC-----------CTTCEEEEETTEECTTSCHHH---HHHHHHHSCTTEEEEEEEEEC
T ss_pred CCEEEEEECCCChHHHcCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHhCCCCCeEEEEEEeC
Confidence 479999999999999999 8 999999999999998653 3 444454433 34478888875
No 272
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.36 E-value=9.4e-08 Score=75.80 Aligned_cols=59 Identities=17% Similarity=0.115 Sum_probs=45.0
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++|| ++||+|++|||++|.+... ......+.. ......++|+|.
T Consensus 65 ~gv~V~~V~~gspA~~aGL-----------~~GD~Il~Vng~~v~~~~~-~~~~~~l~~-~g~~v~l~v~~~ 123 (132)
T 3l4f_D 65 ALQYLESVDEGGVAWRAGL-----------RMGDFLIEVNGQNVVKVGH-RQVVNMIRQ-GGNTLMVKVVMV 123 (132)
T ss_dssp CSEEEEEECTTSGGGGGTC-----------CTTCEEEEESSSBCTTSCH-HHHHHHHHH-TTTEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHc-CCCEEEEEEEEC
Confidence 5899999999999999999 9999999999999987542 112223322 445577787764
No 273
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.36 E-value=7.1e-08 Score=74.01 Aligned_cols=59 Identities=19% Similarity=0.195 Sum_probs=44.8
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.+++||+++| | ++||+|++|||++|.+... ..+..++... ....+++|.|.
T Consensus 38 ~g~~V~~V~~~spA~~aG~l-----------~~GD~I~~vng~~v~~~~~-~~~~~~l~~~-g~~v~l~v~R~ 97 (111)
T 2dlu_A 38 SGVVVRTIVPGGLADRDGRL-----------QTGDHILKIGGTNVQGMTS-EQVAQVLRNC-GNSVRMLVARD 97 (111)
T ss_dssp SSBEEEEECTTSSHHHHTCC-----------CSSCEEEEESSCCCTTSCH-HHHHHHHHHH-CSEEEEEEEES
T ss_pred CCEEEEEECCCCHHHHcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHhC-CCeEEEEEEeC
Confidence 599999999999999999 8 9999999999999986531 1133333322 34467888875
No 274
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.36 E-value=7.6e-08 Score=75.46 Aligned_cols=59 Identities=17% Similarity=0.270 Sum_probs=45.5
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | ++||+|++|||++|.+..+ ......+. ..+...+++|.|.
T Consensus 51 ~gv~V~~V~~~spA~~aG~L-----------~~GD~Il~Ing~~v~~~~~-~~~~~~~~-~~~~~v~l~v~R~ 110 (124)
T 2daz_A 51 MSIFVVGINPEGPAAADGRM-----------RIGDELLEINNQILYGRSH-QNASAIIK-TAPSKVKLVFIRN 110 (124)
T ss_dssp CCEEEEEECTTSHHHHHTCC-----------CTTCEECEESSCBCTTSCH-HHHHHHHH-HSCSEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHH-cCCCeEEEEEEeC
Confidence 599999999999999999 8 9999999999999988654 11212222 2334578888885
No 275
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.36 E-value=2.1e-08 Score=78.90 Aligned_cols=57 Identities=23% Similarity=0.226 Sum_probs=45.0
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEcc--CCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVS--FSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~--~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.+++||+++|| ++||+|++|||++|. +..| +..++... ....+|+|.|.
T Consensus 61 ~gv~V~~V~~~spA~~aGL-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~~~-g~~v~l~v~r~ 119 (126)
T 2yuy_A 61 DTIFVKQVKEGGPAFEAGL-----------CTGDRIIKVNGESVIGKTYSQ---VIALIQNS-DTTLELSVMPK 119 (126)
T ss_dssp CCCCBCCCCSSSHHHHHTC-----------CSSCCCCEETTEECSSCCHHH---HHHHHHTC-TTEEEEECCCC
T ss_pred CCEEEEEECCCChHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHcC-CCEEEEEEEEC
Confidence 6899999999999999999 999999999999998 5555 44444332 34567777765
No 276
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.36 E-value=1.2e-07 Score=80.15 Aligned_cols=59 Identities=17% Similarity=0.124 Sum_probs=44.3
Q ss_pred CCCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEE-eeCCCCceEEEEeC
Q 019504 267 GNGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLI-CAEPNQDHLTCLKS 339 (340)
Q Consensus 267 ~~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~-~~~~~~~~~~~~~~ 339 (340)
..|++|.+|.++|||+++| | ++||+|++|||+++.+..+ ...... .......++++.|.
T Consensus 34 ~~g~~V~~V~~~spA~~aG~l-----------~~GD~I~~vng~~v~~~~~---~~~~~~~~~~g~~v~l~v~r~ 94 (196)
T 3gsl_A 34 DPSIFITKIIPGGAAAQDGRL-----------RVNDSILFVNEVDVREVTH---SAAVEALKEAGSIVRLYVMRR 94 (196)
T ss_dssp CCCEEEEEECTTSHHHHHCCC-----------CTTCEEEEETTEECTTCCH---HHHHHHHHTSCSEEEEEEEEE
T ss_pred CCCEEEEEECCCChHHhcCCC-----------CCCCEEEEECCEECCCCCH---HHHHHHHHhCCCcEEEEEEec
Confidence 3699999999999999999 8 9999999999999998865 222211 11233456666663
No 277
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.36 E-value=5.4e-08 Score=76.70 Aligned_cols=58 Identities=19% Similarity=0.161 Sum_probs=47.2
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCC--CCCCceeEEEee------CCCCceEEEEe
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSC--LSIPSRIYLICA------EPNQDHLTCLK 338 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~--d~~~~~~~~~~~------~~~~~~~~~~~ 338 (340)
.|++|.+|.+++||+++| | ++||+|++|||+++.+.. | ...++... ....++|+|+|
T Consensus 55 ~gi~V~~V~~gspA~~aG~L-----------~~GD~Il~Vng~~v~~~~~~~---~~~~l~~~~~~~g~~~~~v~l~v~R 120 (127)
T 1wg6_A 55 LGIFIKSIIHGGAAFKDGRL-----------RMNDQLIAVNGETLLGKSNHE---AMETLRRSMSMEGNIRGMIQLVILR 120 (127)
T ss_dssp EEEEEEECCSSSSTHHHHTS-----------CSCCBEEEETTEESTTSCHHH---HHHHHHHHHHHHHHHTCEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHCCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHHhhccccCCCCEEEEEEEe
Confidence 589999999999999999 8 999999999999999865 4 44444432 24568899998
Q ss_pred C
Q 019504 339 S 339 (340)
Q Consensus 339 ~ 339 (340)
.
T Consensus 121 ~ 121 (127)
T 1wg6_A 121 R 121 (127)
T ss_dssp C
T ss_pred C
Confidence 6
No 278
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.34 E-value=1.4e-07 Score=70.49 Aligned_cols=57 Identities=23% Similarity=0.225 Sum_probs=44.0
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEeeC-CCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLICAE-PNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~~~-~~~~~~~~~~~~ 340 (340)
.|++|.+|.+ +|+++|| ++||+|++|||++|.+. .| +..++...+ ....+++|.|.+
T Consensus 32 ~Gv~V~~v~~--~a~~aGL-----------~~GD~I~~vng~~v~~~~~~~---~~~~l~~~~~g~~v~l~v~R~g 91 (96)
T 1ujv_A 32 TGQRVKQILD--IQGCPGL-----------CEGDLIVEINQQNVQNLSHTE---VVDILKDCPIGSETSLIIHRGS 91 (96)
T ss_dssp TEEEEEEESC--GGGSTTC-----------CSSCEEEEETTEECSSCCHHH---HHHHHHHSCTTSEEEEEEECCS
T ss_pred CCEEEEEEec--ccccCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHcCCCCCEEEEEEEECC
Confidence 4899999987 4789999 99999999999999987 44 444555432 456788888863
No 279
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.34 E-value=6.4e-08 Score=73.60 Aligned_cols=59 Identities=14% Similarity=0.174 Sum_probs=43.4
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++|| ++||+|++|||++|.+... ......+.. ......++++|.
T Consensus 32 ~g~~V~~V~~~spA~~aGl-----------~~GD~I~~vng~~v~~~~~-~~~~~~~~~-~~~~v~l~v~r~ 90 (106)
T 2eei_A 32 KGVYMTDITPQGVAMRAGV-----------LADDHLIEVNGENVEDASH-EEVVEKVKK-SGSRVMFLLVDK 90 (106)
T ss_dssp CSCEECCCCTTSHHHHHTC-----------CSSEEEEEETTEECTTCCH-HHHHHHHHH-HCSEEEEEECCT
T ss_pred CCEEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHh-CCCeEEEEEEcC
Confidence 6899999999999999999 9999999999999986532 112222222 233466777664
No 280
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.34 E-value=7.9e-08 Score=73.60 Aligned_cols=61 Identities=15% Similarity=0.163 Sum_probs=46.8
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeC---CCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAE---PNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~---~~~~~~~~~~~~ 340 (340)
.+++|.+|.+++||+++| | ++||.|++|||+++.+..- -++..++.... ....+|++.|++
T Consensus 41 ~~~~V~~v~~~s~A~~aG~l-----------~~GD~Il~Vng~~~~~~~~-~~~~~~l~~~~~r~~~~~~l~v~R~~ 105 (109)
T 1wi4_A 41 PLVYIHEVIPGGDCYKDGRL-----------KPGDQLVSINKESMIGVSF-EEAKSIITRAKLRSESPWEIAFIRSG 105 (109)
T ss_dssp SSEEEEEECTTSHHHHHCSC-----------CTTCBEEEETTSCCTTCCH-HHHHHHHHHSCCSSSSCEEEEEECCC
T ss_pred CCEEEEEeCCCChHHHCCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHccccCCCceEEEEEEeCC
Confidence 489999999999999999 8 9999999999999987431 11334444433 456788888863
No 281
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.32 E-value=7.6e-08 Score=71.87 Aligned_cols=58 Identities=19% Similarity=0.154 Sum_probs=44.8
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.+++|.+|.+++||+ +|| ++||+|++|||++|.+... ......+.. .....+++|+|+
T Consensus 31 ~~~~V~~V~~~spA~-agL-----------~~GD~Il~ing~~v~~~~~-~~~~~~~~~-~g~~v~l~v~R~ 88 (96)
T 2edv_A 31 LPLTVVAVTAGGSAH-GKL-----------FPGDQILQMNNEPAEDLSW-ERAVDILRE-AEDSLSITVVRC 88 (96)
T ss_dssp SSCBCCCBCSSSSST-TTS-----------CTTCBEEEESSCBSTTCCH-HHHHHHHHH-CSSCEEEEEEEC
T ss_pred CCeEEEEECCCCchh-hCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHc-CCCeEEEEEEEC
Confidence 589999999999996 999 9999999999999988753 112222222 445688999886
No 282
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.30 E-value=1e-07 Score=72.02 Aligned_cols=58 Identities=21% Similarity=0.126 Sum_probs=44.6
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||++ || ++||+|++|||++|.+..+ ......+. ......+++|.|.
T Consensus 43 ~gv~V~~V~~~spA~~-gL-----------~~GD~I~~vng~~v~~~~~-~~~~~~~~-~~g~~v~l~v~R~ 100 (103)
T 1n7t_A 43 DGIFVTRVQPEGPASK-LL-----------QPGDKIIQANGYSFINIEH-GQAVSLLK-TFQNTVELIIVRE 100 (103)
T ss_dssp CSEECCCBSSSSTTSS-SC-----------CTTCEEEEETTEECSSCCH-HHHHHHHH-HCCSEEEEEEECC
T ss_pred CCEEEEEECCCCchHH-CC-----------CCCCEEEEECCEECCCCCH-HHHHHHhh-cCCCeEEEEEEec
Confidence 6999999999999999 99 9999999999999998653 11222222 3344577888875
No 283
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.29 E-value=1.9e-07 Score=73.29 Aligned_cols=58 Identities=21% Similarity=0.179 Sum_probs=44.0
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEe
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLK 338 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~ 338 (340)
.+++|.+|.++|||+++| | ++||+|++|||++|.+... ..+..++.. .++.+++++.|
T Consensus 45 ~~~~V~~v~~gspA~~aG~L-----------~~GD~Il~ing~~v~~~~~-~~~~~~l~~-~~~~v~l~v~r 103 (125)
T 3hpk_A 45 PCLYIVQVFDNTPAALDGTV-----------AAGDEITGVNGRSIKGKTK-VEVAKMIQE-VKGEVTIHYNK 103 (125)
T ss_dssp SSEEEEEECTTSHHHHHCCC-----------CTTCEEEEETTEECTTCCH-HHHHHHHHH-SCSEEEEEEEE
T ss_pred CCEEEEEeCCCCHHHHCCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHc-CCCeEEEEEEE
Confidence 589999999999999999 8 9999999999999985431 113333433 33447788876
No 284
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.26 E-value=2e-07 Score=72.22 Aligned_cols=59 Identities=19% Similarity=0.137 Sum_probs=44.1
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.+++||+++| | ++||+|++|||++|.+... ......+. ......+++|.|.
T Consensus 50 ~gv~V~~V~~~spA~~aG~L-----------~~GD~Il~vng~~v~~~~~-~~~~~~~~-~~g~~v~l~v~r~ 109 (117)
T 2ehr_A 50 KGIFIKQVLEDSPAGKTNAL-----------KTGDKILEVSGVDLQNASH-SEAVEAIK-NAGNPVVFIVQSL 109 (117)
T ss_dssp CSEEEEEECSSSTTTSSCSC-----------CTTCEEEEESSCBCTTCCH-HHHHHHHH-TSCSSEEEEECCB
T ss_pred CCEEEEEeCCCChHHHcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHH-cCCCeEEEEEEEC
Confidence 699999999999999999 8 9999999999999988652 11222222 2234567777664
No 285
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.26 E-value=4.4e-08 Score=75.24 Aligned_cols=59 Identities=14% Similarity=0.115 Sum_probs=43.0
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.+++||+++| | ++||+|++|||++|.+... .+...++.. .....+++|.|.
T Consensus 44 ~gv~V~~V~~~spA~~aG~L-----------~~GD~Il~vng~~v~~~~~-~~~~~~l~~-~g~~v~l~v~r~ 103 (111)
T 1uju_A 44 EGIFISKVSPTGAAGRDGRL-----------RVGLRLLEVNQQSLLGLTH-GEAVQLLRS-VGDTLTVLVCDG 103 (111)
T ss_dssp CCCEEEEECTTSHHHHHSSC-----------CTTCBCCBBSSCBCTTSCH-HHHHHHHSS-CSSEEEECCCCC
T ss_pred CCEEEEEECCCCHHHHcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHc-CCCeEEEEEEEC
Confidence 699999999999999999 8 9999999999999996432 112223322 223455666654
No 286
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.25 E-value=2.4e-07 Score=70.09 Aligned_cols=59 Identities=17% Similarity=0.171 Sum_probs=44.5
Q ss_pred CCcEEEeeCCCChhhhc-CCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKA-GILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~-gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++ || ++||+|++|||+++.+... .+...++. ..++..++++.|.
T Consensus 35 ~~~~V~~V~~~s~A~~a~gL-----------~~GD~Il~Ing~~v~~~~~-~~~~~~l~-~~~~~v~l~v~~~ 94 (103)
T 2dc2_A 35 VPILISEIHPGQPADRCGGL-----------HVGDAILAVNGVNLRDTKH-KEAVTILS-QQRGEIEFEVVYV 94 (103)
T ss_dssp EEEEEEEECTTSHHHHHTCC-----------CSSEEEEEETTEESTTSCH-HHHHHHHH-HCCSEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHhCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHH-hCCCcEEEEEEec
Confidence 48999999999999995 99 9999999999999987542 11222332 3345678888874
No 287
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.24 E-value=4.1e-07 Score=89.81 Aligned_cols=58 Identities=21% Similarity=0.216 Sum_probs=46.9
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEe-eCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLIC-AEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~-~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||++||| ++||+|++|||++| +..| +...+.. +.....+++|.|.+
T Consensus 496 ~gv~V~~V~~~spA~~AGL-----------~~GD~I~aInG~~v-~~~~---l~~~l~~~~~g~~v~l~v~R~g 554 (597)
T 4fgm_A 496 QGLDVLNVYHDESAYHAGL-----------SAGDKIIAIDHLQA-TEQS---VKRILERYIPGDTVTIHAFRRD 554 (597)
T ss_dssp TEEEEEEECTTSHHHHHTC-----------CTTCEEEEETTEEC-CTTT---HHHHHTTCCTTCEEEEEEEETT
T ss_pred CeEEEEEeCCCChHHHCCC-----------CCCCEEEEECCEEC-CHHH---HHHHHHhcCCCCEEEEEEEECC
Confidence 5899999999999999999 99999999999999 4665 5655554 34455777888864
No 288
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=97.55 E-value=1.4e-07 Score=72.59 Aligned_cols=55 Identities=18% Similarity=0.178 Sum_probs=41.8
Q ss_pred CCcEEEeeCCCChhhh-cCCCccccCCCCCCcCCcEEEEECCEEccC--CCCCCCceeEEEeeCCCCceEEEE
Q 019504 268 NGALVLQVPGNSLAAK-AGILPTTRGFAGNIILGDIIVAVNNKPVSF--SCLSIPSRIYLICAEPNQDHLTCL 337 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~-~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~--~~d~~~~~~~~~~~~~~~~~~~~~ 337 (340)
.|++|.+|.++|||++ +|| ++||+|++|||++|.+ ..| ...++... ++..+++|+
T Consensus 53 ~gv~V~~V~~~spA~~~aGL-----------~~GD~Il~ING~~v~~~~~~~---~~~~l~~~-~~~v~l~V~ 110 (112)
T 2lob_A 53 VPILISEIHPGQPADRCGGL-----------HVGDAILAVNGVNLRDTKHKE---AVTILSQQ-RGEIEFEVV 110 (112)
Confidence 5899999999999999 999 9999999999999965 444 44444332 233566654
No 289
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=98.23 E-value=3e-07 Score=76.08 Aligned_cols=59 Identities=17% Similarity=0.146 Sum_probs=46.3
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.+++||+++| | ++||+|++|||+.|.+... .....++.. ....++|+|.|+
T Consensus 111 ~gi~V~~V~~gspA~~aG~L-----------~~GD~Il~VNG~~v~~~~~-~~~~~~l~~-~g~~v~L~V~R~ 170 (170)
T 3egg_C 111 LGIFVKTVTEGGAAHRDGRI-----------QVNDLLVEVDGTSLVGVTQ-SFAASVLRN-TKGRVRFMIGRE 170 (170)
T ss_dssp BEEEEEEECTTSHHHHHCCC-----------CTTCEEEEETTEECTTBCH-HHHHHHHHH-CCSEEEEEEEEC
T ss_pred CCEEEEEECCCChHHHCCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHc-CCCEEEEEEEeC
Confidence 689999999999999999 8 9999999999999976642 113333433 445688888884
No 290
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.23 E-value=3.3e-07 Score=77.45 Aligned_cols=57 Identities=16% Similarity=0.148 Sum_probs=45.5
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccC--CCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSF--SCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~--~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||+++|| ++||+|++|||++|.+ ..+ +...+.. ....+++|.|.+
T Consensus 110 ~~~~V~~V~~gspA~~aGL-----------~~GD~Il~vng~~v~~~~~~~---~~~~l~~--~~~v~l~v~r~g 168 (192)
T 3k1r_A 110 CGLFISHLIKGGQADSVGL-----------QVGDEIVRINGYSISSCTHEE---VINLIRT--EKTVSIKVRHIG 168 (192)
T ss_dssp EEEEEEEECTTSHHHHTTC-----------CTTEEEEEETTEECTTCCHHH---HHHHHTS--SSEEEEEEEECC
T ss_pred CCEEEEEECCCChHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHcC--CCeEEEEEEECC
Confidence 5899999999999999999 9999999999999998 443 3333333 455778887753
No 291
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.22 E-value=1.8e-07 Score=72.76 Aligned_cols=60 Identities=13% Similarity=0.114 Sum_probs=44.7
Q ss_pred CCcEEEeeCCCChhhhc--CCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeC---CCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKA--GILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAE---PNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~--gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~---~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++ || ++||+|++|||++|.+... .....++.... .....++|.|+
T Consensus 41 ~~v~V~~V~~~spA~~a~gGL-----------~~GD~Il~ing~~v~~~~~-~~~~~~~~~~~~~~~~~v~l~v~R~ 105 (119)
T 2cs5_A 41 MPVIVSRVAPGTPADLCVPRL-----------NEGDQVVLINGRDIAEHTH-DQVVLFIKASCERHSGELMLLVRPN 105 (119)
T ss_dssp EEEEEEEECSSSTTTSSSSCC-----------CTTCEEEEETTBCTTSSCH-HHHHHHHHHHHHCCSSCEEEEEECC
T ss_pred CCeEEEEECCCCHHHHhhcCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHhccccCCCEEEEEEEcc
Confidence 47999999999999999 99 9999999999999987642 11222232221 13578888885
No 292
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=98.22 E-value=3.5e-07 Score=65.95 Aligned_cols=56 Identities=16% Similarity=0.077 Sum_probs=41.2
Q ss_pred EEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 271 LVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 271 ~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|.+|.+++||+++|| +.||.|++|||+.+..... -+....+. .....++++|+.+
T Consensus 26 ~I~~v~~gspA~~aGl-----------~~GD~Il~VNG~~v~~~~~-~evv~llr-~~g~~V~L~v~p~ 81 (82)
T 1r6j_A 26 KITSIVKDSSAARNGL-----------LTEHNICEINGQNVIGLKD-SQIADILS-TSGTVVTITIMPA 81 (82)
T ss_dssp EEEEECTTSHHHHHTC-----------CSSEEEEEETTEECTTCCH-HHHHHHHH-HSCSEEEEEEEEC
T ss_pred EEEEecCCCHHHHcCC-----------CCCCEEEEECCEEcCCCCH-HHHHHHHh-cCCCEEEEEEEeC
Confidence 3789999999999999 8999999999999987762 11222333 4445577776643
No 293
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.22 E-value=3.7e-07 Score=77.39 Aligned_cols=58 Identities=19% Similarity=0.215 Sum_probs=49.3
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccC--CCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSF--SCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~--~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||+++| | ++||+|++|||++|.+ ..| +..++... .....++|.|..
T Consensus 135 ~gv~V~~V~~~s~A~~aG~l-----------~~GD~I~~vng~~v~~~~~~~---~~~~l~~~-~~~v~l~v~R~~ 195 (196)
T 1p1d_A 135 DPLVISDIKKGSVAHRTGTL-----------ELGDKLLAIDNIRLDSCSMED---AVQILQQC-EDLVKLKIRKDE 195 (196)
T ss_dssp CCCEEEECCSSSHHHHTSCC-----------CTTCEEEEETTEEGGGCCHHH---HHHHHHHC-TTCEEEEEECCC
T ss_pred CCEEEEEECCCCcHHhcCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHhC-CCEEEEEEEeCC
Confidence 699999999999999999 8 9999999999999999 666 56566554 566888888863
No 294
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.20 E-value=8.9e-07 Score=83.13 Aligned_cols=74 Identities=24% Similarity=0.225 Sum_probs=53.0
Q ss_pred eeeeeeEEeccHHHHhhcCCCCCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEE
Q 019504 247 VRAGLNVDIAPDLVASQLNVGNGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYL 324 (340)
Q Consensus 247 ~~~~lg~~~~~~~~~~~~~~~~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~ 324 (340)
.+.++|+.+.... .-..+++|.+|.++|||+++|| ++||+|++|||++|.+. .| +..++
T Consensus 83 ~~~giG~~~~~~~-----~~~~~~~V~~v~~~spA~~aGl-----------~~GD~I~~Ing~~v~~~~~~~---~~~~l 143 (388)
T 1fc6_A 83 SVTGVGLEITYDG-----GSGKDVVVLTPAPGGPAEKAGA-----------RAGDVIVTVDGTAVKGMSLYD---VSDLL 143 (388)
T ss_dssp SCBBCSEEEEECT-----TCSSCEEEEEECTTSHHHHTTC-----------CTTCEEEEETTEECTTCCHHH---HHHHH
T ss_pred ceEEEEEEEEEee-----cCCCcEEEEEeCCCChHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHH
Confidence 3567787764321 1136899999999999999999 99999999999999986 33 33333
Q ss_pred EeeCCCCceEEEEeC
Q 019504 325 ICAEPNQDHLTCLKS 339 (340)
Q Consensus 325 ~~~~~~~~~~~~~~~ 339 (340)
.......++++|.|.
T Consensus 144 ~~~~g~~v~l~v~r~ 158 (388)
T 1fc6_A 144 QGEADSQVEVVLHAP 158 (388)
T ss_dssp CBSTTCEEEEEEEET
T ss_pred hcCCCCEEEEEEEeC
Confidence 333444466777665
No 295
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.20 E-value=4.5e-07 Score=77.31 Aligned_cols=59 Identities=15% Similarity=0.224 Sum_probs=43.9
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccC--CCCCCCceeEEEeeCCCC-ceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSF--SCLSIPSRIYLICAEPNQ-DHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~--~~d~~~~~~~~~~~~~~~-~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | +.||+|++|||++|.+ ... ......+. ..... .+++|+|.
T Consensus 45 ~g~~V~~V~~~spA~~aG~L-----------~~GD~Il~vng~~v~~~~~~~-~~~~~~~~-~~~~~~v~l~v~R~ 107 (206)
T 3r0h_A 45 TGCVITHVYPEGQVAADKRL-----------KIFDHICDINGTPIHVGSMTT-LKVHQLFH-TTYEKAVTLTVFRA 107 (206)
T ss_dssp SCEEEEEECTTSHHHHHCCC-----------CTTCEEEEETTEECCGGGSCH-HHHHHHHH-SCCSSEEEEEEECC
T ss_pred CCeEEEEECCCChHHhcCCC-----------CCCCEEEEECCEEcCCCccCH-HHHHHHHH-hcCCCceEEEEEec
Confidence 699999999999999998 8 9999999999999999 542 11222222 22233 67777775
No 296
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.19 E-value=2.7e-07 Score=78.27 Aligned_cols=58 Identities=19% Similarity=0.206 Sum_probs=45.5
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccC--CCCCCCceeEEEeeC-CCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSF--SCLSIPSRIYLICAE-PNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~--~~d~~~~~~~~~~~~-~~~~~~~~~~~ 339 (340)
.+++|.+|.++|||+++| | ++||+|++|||+++.+ ..| +..++.... ....++++.|.
T Consensus 36 ~~~~V~~v~~~spA~~aG~l-----------~~GD~I~~vng~~v~~~~~~~---~~~~l~~~~~g~~v~l~v~R~ 97 (196)
T 1p1d_A 36 SPPLISYIEADSPAERCGVL-----------QIGDRVMAINGIPTEDSTFEE---ANQLLRDSSITSKVTLEIEFD 97 (196)
T ss_dssp CSEEEEECCTTSHHHHTSCC-----------CSSCCEEEETTBCSTTSCHHH---HHHHHHTCCSSSEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHhCCCCCeEEEEEEec
Confidence 589999999999999999 8 9999999999999995 455 444444433 23467777775
No 297
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.18 E-value=1.5e-06 Score=63.28 Aligned_cols=57 Identities=18% Similarity=0.195 Sum_probs=41.4
Q ss_pred CCcEEEeeCCCChhhh-cCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEE
Q 019504 268 NGALVLQVPGNSLAAK-AGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCL 337 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~-~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~ 337 (340)
.+++|.+|.++|||++ +|| ++||+|++|||+++.+... ......+. ......+++|.
T Consensus 28 ~~~~V~~V~~gspA~~~agl-----------~~GD~I~~vng~~v~~~~~-~~~~~~~~-~~~~~v~l~v~ 85 (87)
T 4e34_A 28 VPILISEIHPGQPADRCGGL-----------HVGDAILAVNGVNLRDTKH-KEAVTILS-QQRGEIEFEVV 85 (87)
T ss_dssp EEEEEEEECTTSHHHHHSCC-----------CTTEEEEEETTEECTTCCH-HHHHHHHH-HCCSEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHH-cCCCeEEEEEE
Confidence 4799999999999999 799 9999999999999987642 11223332 23334555554
No 298
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.18 E-value=1.9e-07 Score=73.84 Aligned_cols=60 Identities=5% Similarity=0.013 Sum_probs=44.9
Q ss_pred CCcEEEeeCCCChhhhc-CCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKA-GILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~-gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.+++|.+|.+++||+++ || ++||+|++|||+++.+..- -+...++.........++|.|.
T Consensus 57 ~~i~I~~V~~gs~A~~aggL-----------~~GD~Il~Vng~~v~~~~~-~~~~~~l~~~~~~~v~l~v~r~ 117 (130)
T 1i16_A 57 KPLTINRIFKGAASEQSETV-----------QPGDEILQLGGTAMQGLTR-FEAWNIIKALPDGPVTIVIRRK 117 (130)
T ss_dssp CCCEEEEECSSCCCSSSCCC-----------CTTCCEEECSSCBGGGSCH-HHHHHHHHTSCSSEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHhCCCceEEEEEEeC
Confidence 58999999999999999 88 9999999999999998631 1133333333333477888775
No 299
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.17 E-value=2.8e-07 Score=70.83 Aligned_cols=59 Identities=17% Similarity=0.129 Sum_probs=44.3
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.+++||+++| | ++||+|++|||++|.+... ......+. .......+++.|.
T Consensus 39 ~gv~V~~V~~~s~A~~aG~L-----------~~GD~Il~Vng~~v~~~~~-~~~~~~~~-~~~~~v~l~v~r~ 98 (113)
T 1um7_A 39 EGIFVSFILAGGPADLSGEL-----------RRGDRILSVNGVNLRNATH-EQAAAALK-RAGQSVTIVAQYR 98 (113)
T ss_dssp CCCBCCCBCSSSHHHHTTCC-----------CTTCEEEEESSCBCTTCCH-HHHHHHHH-SCCSEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHH-hCCCcEEEEEEEC
Confidence 689999999999999999 8 9999999999999998742 11222222 2334467777764
No 300
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.15 E-value=4.3e-07 Score=77.15 Aligned_cols=57 Identities=16% Similarity=0.083 Sum_probs=47.9
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEcc--CCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVS--FSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~--~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | ++||+|++|||++|. +..| +..++.. ......++|.|.
T Consensus 135 ~g~~V~~v~~~s~A~~aG~l-----------~~GD~I~~ing~~v~~~~~~~---~~~~l~~-~~~~v~l~v~R~ 194 (200)
T 2qt5_A 135 RPVVITCVRPGGPADREGTI-----------KPGDRLLSVDGIRLLGTTHAE---AMSILKQ-CGQEATLLIEYD 194 (200)
T ss_dssp EEEEEEEECTTSHHHHHCCC-----------CTTCEEEEETTEECTTCCHHH---HHHHHHT-TCSEEEEEEEEE
T ss_pred CCEEEEEECCCChHHHcCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHc-CCCeEEEEEEEC
Confidence 599999999999999999 8 999999999999999 7776 5555554 445577888875
No 301
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.14 E-value=9.5e-07 Score=84.19 Aligned_cols=58 Identities=28% Similarity=0.316 Sum_probs=50.1
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||+++|| ++||+|++|||++|.+.+| +..++.. .++...++|.|.+
T Consensus 363 ~gv~V~~V~~~spA~~aGL-----------~~GD~I~~vng~~v~~~~~---~~~~l~~-~~~~v~l~v~R~g 420 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAGL-----------QKDDVIIGVNRDRVNSIAE---MRKVLAA-KPAIIALQIVRGN 420 (436)
T ss_pred CCEEEEEeCCCCHHHHcCC-----------CCCCEEEEECCEECCCHHH---HHHHHHh-CCCeEEEEEEECC
Confidence 5899999999999999999 9999999999999999998 6666665 3346888888864
No 302
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.11 E-value=8.3e-07 Score=84.88 Aligned_cols=58 Identities=28% Similarity=0.294 Sum_probs=49.7
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||+++|| ++||+|++|||++|.+.+| +...+.. .+....++|.|.+
T Consensus 386 ~Gv~V~~V~~gspA~~aGL-----------~~GD~I~~Vng~~v~~~~~---~~~~l~~-~~~~v~l~v~R~g 443 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAGI-----------RPGDIIISANKKPVTDVKS---LQTIAQE-KKKELLVQVLRGP 443 (451)
T ss_dssp EEEEEEEECTTSHHHHHTC-----------CTTCEEEEETTEECCSHHH---HHHHTTS-SCSCEEEEEEETT
T ss_pred CceEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCHHH---HHHHHhc-CCCeEEEEEEECC
Confidence 4889999999999999999 9999999999999999988 6666655 4456788888864
No 303
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.11 E-value=7.4e-07 Score=69.14 Aligned_cols=57 Identities=25% Similarity=0.182 Sum_probs=43.8
Q ss_pred CcEEEeeCCCChhhhc-CCCccccCCCCCCcCCcEEEEECCEEccCCC--CCCCceeEEEee---CCCCceEEEEeC
Q 019504 269 GALVLQVPGNSLAAKA-GILPTTRGFAGNIILGDIIVAVNNKPVSFSC--LSIPSRIYLICA---EPNQDHLTCLKS 339 (340)
Q Consensus 269 g~~V~~v~~~spa~~~-gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~--d~~~~~~~~~~~---~~~~~~~~~~~~ 339 (340)
.++|.+|.+++||+++ || ++||.|++|||+++.+.. + +...+... .....+++|+|.
T Consensus 44 ~i~I~~V~~gspA~~aggL-----------~~GD~Il~Ing~~v~~~~~~~---~~~~l~~~~~~~g~~v~l~v~r~ 106 (118)
T 1v6b_A 44 KVVVSAVYEGGAAERHGGV-----------VKGDEIMAINGKIVTDYTLAE---AEAALQKAWNQGGDWIDLVVAVC 106 (118)
T ss_dssp SEEEEECCTTSHHHHHCSS-----------CTTCEEEEESSCBCTTCBHHH---HHHHHHHHHHHTCSEEEEEEECC
T ss_pred CEEEEEECCCCHHHHcCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHHhhhcCCCeEEEEEEeC
Confidence 4999999999999999 88 999999999999998754 3 33333322 234577888874
No 304
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.10 E-value=1e-06 Score=74.49 Aligned_cols=57 Identities=21% Similarity=0.127 Sum_probs=42.8
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEe
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLK 338 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~ 338 (340)
.|++|.+|.++|||++ || ++||+|++|||++|.+... ......+. .......|+|+|
T Consensus 24 ~g~~V~~v~~~spA~~-gl-----------~~GD~I~~vng~~v~~~~~-~~~~~~~~-~~~~~v~l~v~r 80 (195)
T 2qbw_A 24 DGIFVTRVQPEGPASK-LL-----------QPGDKIIQANGYSFINIEH-GQAVSLLK-TFQNTVELIIVR 80 (195)
T ss_dssp CSEEEEEECTTSTTTT-TC-----------CTTCEEEEETTEECTTCCH-HHHHHHHH-HCCSEEEEEEEE
T ss_pred CCEEEEEECCCChHHh-CC-----------CCCCEEEEECCEECCCCCH-HHHHHHHH-cCCCeEEEEEEE
Confidence 6999999999999999 99 9999999999999998763 11211221 222356777776
No 305
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.08 E-value=7.7e-07 Score=75.84 Aligned_cols=59 Identities=10% Similarity=0.077 Sum_probs=45.5
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | ++||+|++|||++|.+... ..+..++.. ..+...++|.|.
T Consensus 136 ~gv~V~~V~~gs~A~~aG~L-----------~~GD~Il~VNg~~v~~~~~-~~~~~~l~~-~~~~v~L~V~R~ 195 (206)
T 3r0h_A 136 IGCTIADLIQGQYPEIDSKL-----------QRGDIITKFNGDALEGLPF-QVCYALFKG-ANGKVSMEVTRP 195 (206)
T ss_dssp SCEEEEEECTTSCHHHHHHC-----------CTTCEEEEETTEECTTCCH-HHHHHHHHT-CCSEEEEEEEEE
T ss_pred ceEEEEEECCCChHHHcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHHHc-CCCeEEEEEEeC
Confidence 689999999999999999 8 9999999999999997642 113333332 345577888874
No 306
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.08 E-value=1.2e-06 Score=74.31 Aligned_cols=57 Identities=19% Similarity=0.065 Sum_probs=44.1
Q ss_pred CCcEEEeeCCCChhhhc-CCCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKA-GILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~-gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++ || ++||+|++|||+++.+. .| +..++. ......++++.|.
T Consensus 33 ~~~~V~~v~~~spA~~aggl-----------~~GD~I~~vng~~v~~~~~~~---~~~~~~-~~g~~v~l~v~R~ 92 (200)
T 2qt5_A 33 GKPRVSNLRQGGIAARSDQL-----------DVGDYIKAVNGINLAKFRHDE---IISLLK-NVGERVVLEVEYE 92 (200)
T ss_dssp SCSEEEEECTTSHHHHTTSC-----------CTTCEEEEETTEECTTSCHHH---HHHHHH-TCCSEEEEEEEEE
T ss_pred CCeEEEEECCCChHHhcCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHH-hCCCeEEEEEecc
Confidence 68999999999999999 99 99999999999999998 44 332222 1233467777763
No 307
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.07 E-value=5.6e-07 Score=69.68 Aligned_cols=58 Identities=14% Similarity=0.024 Sum_probs=43.6
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.+++||+ +|| ++||+|++|||++|.+..+ ......+.. .....+++|.|.
T Consensus 46 ~gv~V~~V~~~spA~-~gL-----------~~GD~I~~Vng~~v~~~~~-~~~~~~l~~-~~~~v~l~v~R~ 103 (117)
T 2csj_A 46 TSIVISDVLPGGPAD-GLL-----------QENDRVVMVNGTPMEDVLH-SFAVQQLRK-SGKIAAIVVKRP 103 (117)
T ss_dssp CBCEEEEECTTSSHH-HHB-----------CTTCEEEEESSCBCBTCCH-HHHHHHHHH-SCSEEEEEEEEE
T ss_pred CCEEEEEECCCCccc-ccC-----------CCCCEEEEECCEECCCcCH-HHHHHHHhc-CCCeEEEEEEEC
Confidence 589999999999997 999 9999999999999998753 112222222 344577778774
No 308
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=97.97 E-value=1.9e-06 Score=80.72 Aligned_cols=58 Identities=28% Similarity=0.282 Sum_probs=45.3
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEe-eCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLIC-AEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~-~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++|| ++||+|++|||++|.+. ++ +...+.. ......++++.|+
T Consensus 31 ~gi~V~~V~~gspA~~aGL-----------~~GD~Il~VnG~~v~~~~~~e---~~~~l~~~~~g~~v~l~v~r~ 91 (391)
T 3tsz_A 31 VGIFVAGVLEDSPAAKEGL-----------EEGDQILRVNNVDFTNIIREE---AVLFLLDLPKGEEVTILAQKK 91 (391)
T ss_dssp TEEEEEEECTTCHHHHTTC-----------CTTEEEEEETTEECTTCCHHH---HHHHHHHSCTTSEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHhhcCCCeEEEEEeeC
Confidence 6999999999999999999 99999999999999873 33 3333333 2333577777775
No 309
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=97.96 E-value=4.9e-07 Score=77.72 Aligned_cols=56 Identities=20% Similarity=0.137 Sum_probs=43.0
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEcc--CCCCCCCceeEEEeeCCCCc-eEEEEe
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVS--FSCLSIPSRIYLICAEPNQD-HLTCLK 338 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~--~~~d~~~~~~~~~~~~~~~~-~~~~~~ 338 (340)
.|++|..|.+++||+++|| ++||+|++|||++|. +..| +..++... .... .++|.|
T Consensus 33 ~gv~V~~V~~gSpA~~aGL-----------~~GD~Il~VNG~~V~~~s~~d---l~~~l~~~-g~~v~~l~V~R 91 (216)
T 2krg_A 33 PGQFIRSVDPDSPAEASGL-----------RAQDRIVEVNGVCMEGKQHGD---VVSAIRAG-GDETKLLVVDR 91 (216)
T ss_dssp CSCBEEEECTTSHHHHHTC-----------CTTCBCCEETTEECTTCCTHH---HHHHHHHH-CSEEEEEECCH
T ss_pred CCeEEEEeCCCChHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHhc-CCeEEEEEEEE
Confidence 4899999999999999999 999999999999999 6666 44444333 2234 455544
No 310
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.95 E-value=1e-06 Score=66.56 Aligned_cols=35 Identities=17% Similarity=0.280 Sum_probs=32.3
Q ss_pred CcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCC
Q 019504 269 GALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFS 314 (340)
Q Consensus 269 g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~ 314 (340)
+++|.+|.+++||+++| | ++||.|++|||+++.+.
T Consensus 33 ~~~I~~v~~~s~A~~aG~L-----------~~GD~Il~Vng~~v~~~ 68 (103)
T 1ufx_A 33 LPRIVTIQRGGSAHNCGQL-----------KVGHVILEVNGLTLRGK 68 (103)
T ss_dssp SCEEEEECTTSHHHHHCSS-----------CTTCBCCEETTEECTTC
T ss_pred cEEEEEeCCCChHHHCCCC-----------CCCCEEEEECCEECCCC
Confidence 45999999999999999 8 99999999999999773
No 311
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.93 E-value=3.2e-06 Score=79.37 Aligned_cols=55 Identities=24% Similarity=0.216 Sum_probs=42.5
Q ss_pred CcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 269 GALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 269 g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.++|..|.++|||++||| ++||+|++|||++|.+.. +..++.. .....++++.|+
T Consensus 91 ~~~V~~V~~gsPA~~AGL-----------~~GD~I~~InG~~v~~~~----~~~~l~~-~g~~v~l~v~R~ 145 (403)
T 3k50_A 91 NALISYVVPGSPAEEAGL-----------QRGHWIMMMNGDYITKKV----ESELLQG-STRQLQIGVYKE 145 (403)
T ss_dssp EEEEEEECTTSHHHHTTC-----------CTTCEEEEETTBCBCTTT----GGGGTSC-SCEEEEEEEEEE
T ss_pred eEEEEEeCCCChHHHcCC-----------CCCCEEEEECCEEccchh----HHHHhhC-CCCEEEEEEEeC
Confidence 478999999999999999 999999999999999874 3333333 334456666664
No 312
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=97.91 E-value=4.7e-06 Score=63.72 Aligned_cols=57 Identities=19% Similarity=0.075 Sum_probs=43.3
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCC--CCCCceeEEEee-CCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSC--LSIPSRIYLICA-EPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~--d~~~~~~~~~~~-~~~~~~~~~~~~~ 340 (340)
.|..|.+|.+ |++.+|| ++||+|++|||++|.+.. | +...+... ....++|+|.|.+
T Consensus 34 ~g~~V~~I~~--~~~~aGL-----------~~GD~Il~VNG~~v~~~~h~e---vv~~lk~~~~G~~v~L~V~R~g 93 (113)
T 3soe_A 34 TGQKVKMILD--SQWCQGL-----------QKGDIIKEIYHQNVQNLTHLQ---VVEVLKQFPVGADVPLLILRGG 93 (113)
T ss_dssp TEEEEEEESC--GGGSTTC-----------CTTCEEEEETTEECTTSCHHH---HHHHHHHSCTTCEEEEEEEESS
T ss_pred CCcEEEEecC--hHHhCCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHcCCCCCEEEEEEEECC
Confidence 4677889876 6889999 999999999999999875 4 44444432 3446888888864
No 313
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.87 E-value=1.8e-06 Score=82.47 Aligned_cols=58 Identities=24% Similarity=0.265 Sum_probs=0.0
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKSS 340 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
.|++|.+|.++|||+++|| ++||+|++|||++|.+..| +..++.... +...++|.|.+
T Consensus 383 ~gv~V~~V~~gspA~~aGL-----------~~GDiI~~vng~~v~~~~~---l~~~l~~~~-~~v~l~v~R~g 440 (448)
T 1ky9_A 383 QGVVVNNVKTGTPAAQIGL-----------KKGDVIIGANQQAVKNIAE---LRKVLDSKP-SVLALNIQRGD 440 (448)
T ss_dssp -------------------------------------------------------------------------
T ss_pred CeEEEEEecCCCHHHHcCC-----------CCCCEEEEECCEECCCHHH---HHHHHHcCC-CeEEEEEEECC
Confidence 6899999999999999999 9999999999999999988 666666543 35788888863
No 314
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=97.82 E-value=4.9e-06 Score=79.32 Aligned_cols=58 Identities=28% Similarity=0.283 Sum_probs=45.9
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccC--CCCCCCceeEEEee-CCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSF--SCLSIPSRIYLICA-EPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~--~~d~~~~~~~~~~~-~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++|| ++||+|++|||++|.+ ..+ ....+... .....+++|.|+
T Consensus 23 ~Gi~V~~V~~gspA~~aGL-----------~~GD~Il~VNG~~v~~~t~~e---~~~~L~~~~~g~~v~L~V~r~ 83 (468)
T 3shw_A 23 VGIFVAGVLEDSPAAKEGL-----------EEGDQILRVNNVDFTNIIREE---AVLFLLDLPKGEEVTILAQKK 83 (468)
T ss_dssp TEEEEEEECSSSHHHHTTC-----------CTTEEEEEETTEECTTCCHHH---HHHHHHHSCTTSEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHhcCCCCEEEEEEEEC
Confidence 6999999999999999999 9999999999999988 444 33444432 334577778774
No 315
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=97.79 E-value=3.9e-06 Score=74.06 Aligned_cols=59 Identities=17% Similarity=0.094 Sum_probs=45.5
Q ss_pred CCcEEEeeCCCChhhh-cCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAK-AGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~-~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.+++||++ +|| ++||+|++|||++|.+... .+...++.. ..+.++++|.|.
T Consensus 103 ~gi~V~~V~~gspA~~~aGL-----------~~GD~Il~VNG~~v~~~t~-~e~v~~l~~-~g~~V~L~V~R~ 162 (263)
T 1z87_A 103 MPILISKIFKGLAADQTEAL-----------FVGDAILSVNGEDLSSATH-DEAVQALKK-TGKEVVLEVKYM 162 (263)
T ss_dssp EEEEEEECCTTSHHHHCTTC-----------CSSCEEEEESSCBCTTSCH-HHHHHHHHH-CCSCCCEEEECC
T ss_pred CCEEEEEECCCCHHHHhCCC-----------CCCCEEEEECCEECCCcCH-HHHHHHHhc-CCCeEEEEEEeC
Confidence 5899999999999999 799 9999999999999998742 112223333 245588888874
No 316
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=97.78 E-value=9e-06 Score=76.18 Aligned_cols=60 Identities=17% Similarity=0.212 Sum_probs=44.8
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEee-CCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICA-EPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~-~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | ++||+|++|||+++.+... .....++... .....++++.|.
T Consensus 232 ~g~~V~~V~~gspA~~aG~L-----------~~GD~Il~VnG~~v~~~~~-~~~~~~l~~~~~~~~v~l~v~r~ 293 (388)
T 3suz_A 232 PTVILANMMNGGPAARSGKL-----------SIGDQIMSINGTSLVGLPL-ATCQGIIKGLKNQTQVKLNIVSC 293 (388)
T ss_dssp CCCBCCCCCCSSHHHHTCCC-----------CTTCEEEEETTEECSSCCS-TTHHHHTTTCTTCSCEEEEEEEC
T ss_pred CCEEEEeeCCCCHHHHcCCC-----------CCCCEEEEECCEEccCCCH-HHHHHHHHhccCCCccccccccc
Confidence 479999999999999999 8 9999999999999998842 1133333333 223367777764
No 317
>3zve_A 3C protease; hydrolase, michael inhibitor; HET: G84; 1.80A {Human enterovirus} PDB: 3zv8_A* 3zva_A* 3zvb_A* 3zv9_A* 3zvd_A* 3zvc_A* 3zvf_A* 3zvg_A*
Probab=97.72 E-value=0.002 Score=53.59 Aligned_cols=144 Identities=15% Similarity=0.168 Sum_probs=81.1
Q ss_pred eEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCcee-EEEEEEEEeCC---CCcEEEEEEecCCCCccce
Q 019504 59 GSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQK-NFEGKLVGADR---AKDLAVLKIEASEDLLKPI 134 (340)
Q Consensus 59 GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~-~~~a~v~~~d~---~~DlAlL~v~~~~~~~~~~ 134 (340)
=||..|-.+ ++|.++|..... .+.+ +|... ..+... ..|. ..||++++++..++ ++-+
T Consensus 25 ft~LgI~dr-~~lvP~Ha~~~~------------ti~i---~g~~~~v~d~~~-l~~~~~~~~Dlt~v~l~~~~k-FRDI 86 (190)
T 3zve_A 25 FTMLGVHDR-VAVIPTHASVGE------------TIYI---NDVETKVLDACA-LRDLTDTNLEITIVKLDRNQK-FRDI 86 (190)
T ss_dssp EEEEEEEBT-EEEEEGGGCCCS------------EEEE---TTEEEEEEEEEE-EECTTCCEEEEEEEEECCSSC-BCCC
T ss_pred EEEEEEeCC-EEEEecCCCCCc------------EEEE---CCEEEEeeEEEE-EEcCCCCeEEEEEEEcCCCcc-cCch
Confidence 478888755 999999965432 3333 33211 122222 2233 35999999987642 2222
Q ss_pred --eecCCCCCCCCCEEEEEecCCCCCCceeEEEEeeeccccccCCCceecceEEEeeccCCCCccceeecCCCcEEEEEe
Q 019504 135 --NVGQSSFLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSKGNLIGINT 212 (340)
Q Consensus 135 --~l~~~~~~~~G~~v~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~ 212 (340)
-|.+.. ....+.++++=.+......+..|.+...... ...+.....++.++++..+|+=||||+. +|+++||++
T Consensus 87 r~~~~~~~-~~~~~~~l~i~s~~~~~~~~~v~~v~~~~~i--~l~g~~~~~~~~Y~~pT~~G~CG~~li~-~gkI~GiHv 162 (190)
T 3zve_A 87 RHFLPRYE-DDYNDAVLSVHTSKFPNMYIPVGQVTNYGFL--NLGGTPTHRILMYNFPTRAGQCGGVVTT-TGKVIGIHV 162 (190)
T ss_dssp GGGSCSSC-CCEEEEEEEECSSSCSSEEEEEEEEEEEEEE--EETTEEEEEEEEESSCCCTTCTTCEEEE-TTEEEEEEE
T ss_pred HHhccccC-CCCCCeEEEEECCCCcceEEecccceEecee--ecCCCeeeeeEEEecCCCCCccCCeEEE-CCCEEEEEE
Confidence 132222 2334455555333222222333444433221 1223344467899999999999999995 799999999
Q ss_pred eeeeCCCCcCceEEEEeh
Q 019504 213 AIITQTGTSAGVGFAIPS 230 (340)
Q Consensus 213 ~~~~~~~~~~~~~~aip~ 230 (340)
++- ...+|+.++
T Consensus 163 aG~------G~~g~~~~l 174 (190)
T 3zve_A 163 GGN------GAQGFAAML 174 (190)
T ss_dssp EEC------SSCEEEEEC
T ss_pred CcC------CCceEehhh
Confidence 862 234666554
No 318
>3qzr_A 3C protein; chymotrypsin-fold, beta-ribbon, hydrolysis, nucleus, hydrola hydrolase inhibitor complex; HET: AG7; 1.04A {Human enterovirus 71} SCOP: b.47.1.0 PDB: 3osy_A 3qzq_A* 3r0f_A* 3sjo_A* 3sjk_A 3sji_A* 3sj8_A* 3sj9_A
Probab=97.61 E-value=0.0084 Score=49.49 Aligned_cols=144 Identities=14% Similarity=0.149 Sum_probs=81.3
Q ss_pred eEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEE-EEEEEE-eC-CCCcEEEEEEecCCCCcccee
Q 019504 59 GSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNF-EGKLVG-AD-RAKDLAVLKIEASEDLLKPIN 135 (340)
Q Consensus 59 GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~-~a~v~~-~d-~~~DlAlL~v~~~~~~~~~~~ 135 (340)
=||+-|-.+ ..|-..|.-.. + .+.+ +|+...+ ++..+. .+ ...||++++++..++ ++-++
T Consensus 29 ft~LgI~dr-~~vvP~Ha~~~-~-----------~i~i---~g~~~~v~d~~~L~~~~g~~~Elt~v~l~~~~k-fRDIr 91 (187)
T 3qzr_A 29 FTMLGVRDR-LAVLPRHSQPG-K-----------TIWI---EHKLVNVLDAVELVDEQGVNLALTLITLDTNEK-FRDIT 91 (187)
T ss_dssp EEEEEEEBT-EEEEEGGGCCC-S-----------EEEE---TTEEEEEEEEEECCCTTCCCCSEEEEEECSSCC-BCCCG
T ss_pred EEEEEEeee-EEEEeCCCCCC-C-----------EEEE---CCEEEEeeeeEEEECCCCCEEEEEEEEcCCCcc-ccchH
Confidence 488888645 88889999432 2 4443 4542221 111111 11 246999999987542 22221
Q ss_pred --ecCCCCCCCCCEEEEEecCCCCCC-ceeEEEEeeeccccccCCCceecceEEEeeccCCCCccceeecCCCcEEEEEe
Q 019504 136 --VGQSSFLKVGQQCLAIGNPFGFDH-TLTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSKGNLIGINT 212 (340)
Q Consensus 136 --l~~~~~~~~G~~v~~iG~p~g~~~-~~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~ 212 (340)
+++. ...-..+.++-+.....+ .+..|.+...... .-++......+.++++...|.=||+|+. .|+++||++
T Consensus 92 kfi~~~--~~~~~~~~L~~ns~~~~~~~~~vG~v~~~g~i--nlsg~~t~r~l~Y~~pTk~G~CGgvl~~-~gkIiGIHv 166 (187)
T 3qzr_A 92 KFIPEN--ISTASDATLVINTEHMPSMFVPVGDVVQYGFL--NLSGKPTHRTMMYNFPTKAGQCGGVVTS-VGKIIGIHI 166 (187)
T ss_dssp GGSCSS--CCCEEEEEEEECCSSSCSEEEEEEEEEEEEEE--EETTEEEEEEEEESSCCCTTCTTCEEEE-TTEEEEEEE
T ss_pred HhCccC--cCCCCceEEEEEcCCCcceEEEeccEEEeceE--eCCCCccccEEEECCCCCCCccCCeEEe-cCcEEEEEE
Confidence 2222 221123444444333323 2344655543221 1122233467999999999999999996 899999999
Q ss_pred eeeeCCCCcCceEEEEeh
Q 019504 213 AIITQTGTSAGVGFAIPS 230 (340)
Q Consensus 213 ~~~~~~~~~~~~~~aip~ 230 (340)
++- ...+|+.++
T Consensus 167 aGn------G~~G~~a~L 178 (187)
T 3qzr_A 167 GGN------GRQGFCAGL 178 (187)
T ss_dssp EEC------SSCEEEEEC
T ss_pred CCC------CCcEEEEEe
Confidence 862 345666654
No 319
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.60 E-value=4.2e-05 Score=80.57 Aligned_cols=57 Identities=12% Similarity=0.030 Sum_probs=46.0
Q ss_pred CCcEEEeeCCC--------ChhhhcC--CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEE
Q 019504 268 NGALVLQVPGN--------SLAAKAG--ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCL 337 (340)
Q Consensus 268 ~g~~V~~v~~~--------spa~~~g--l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~ 337 (340)
.+++|.+|.++ |||+++| | + ||+|++|||+++....+ ...++.......++++|.
T Consensus 748 ~~~~v~~v~~~~~~~~~~~spa~~ag~~l-----------~-GD~I~~i~g~~~~~~~~---~~~~~~~~~g~~v~l~v~ 812 (1045)
T 1k32_A 748 DHYVVAKAYAGDYSNEGEKSPIFEYGIDP-----------T-GYLIEDIDGETVGAGSN---IYRVLSEKAGTSARIRLS 812 (1045)
T ss_dssp TEEEEEEECBSCTTSTTCBCGGGGGTCCC-----------T-TCEEEEETTEECBTTBC---HHHHHHTTTTSEEEEEEE
T ss_pred CEEEEEEecCCCcccccCCChHHHCCCCc-----------C-CCEEEEECCEEccchhh---HHHhhcCCCCCEEEEEEE
Confidence 68999999987 9999999 8 9 99999999999998876 455555555555677776
Q ss_pred eC
Q 019504 338 KS 339 (340)
Q Consensus 338 ~~ 339 (340)
|+
T Consensus 813 r~ 814 (1045)
T 1k32_A 813 GK 814 (1045)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 320
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=97.57 E-value=3e-05 Score=78.42 Aligned_cols=59 Identities=24% Similarity=0.164 Sum_probs=45.3
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.++|||+++| | ++||+|++|||++|.+..+ .++...+.. ....+.++|.|.
T Consensus 184 ~gv~V~~V~~gs~A~~aG~L-----------~~GD~Il~Vng~~v~~~~~-~~~~~~l~~-~~~~v~l~V~R~ 243 (721)
T 2xkx_A 184 NSIYVTKIIEGGAAHKDGRL-----------QIGDKILAVNSVGLEDVMH-EDAVAALKN-TYDVVYLKVAKP 243 (721)
T ss_pred CceEEEEeCCCCchhhcCCC-----------CCCCEEEEECCeeCCCCCH-HHHHHHHHc-CCCeEEEEEEeC
Confidence 699999999999999999 8 9999999999999998752 113333322 234467888775
No 321
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=97.56 E-value=3.8e-05 Score=77.69 Aligned_cols=59 Identities=17% Similarity=0.114 Sum_probs=44.9
Q ss_pred CCcEEEeeCCCChhhhcC-CCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEeC
Q 019504 268 NGALVLQVPGNSLAAKAG-ILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~g-l~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
.|++|.+|.+++||+++| | +.||+|++|||++|.+... ......+.. ....++++|.|.
T Consensus 89 ~g~~V~~v~~gspA~~aG~L-----------~~GD~Il~Vng~~v~~~~~-~~~~~~l~~-~g~~v~l~v~R~ 148 (721)
T 2xkx_A 89 PSIFITKIIPGGAAAQDGRL-----------RVNDSILFVNEVDVREVTH-SAAVEALKE-AGSIVRLYVMRR 148 (721)
T ss_pred CCeEEEEeCCCCHHHhcCCC-----------CCCCEEEEECCEECCCCCH-HHHHHHhhc-cccccceEEEec
Confidence 699999999999999999 8 9999999999999998853 112223322 234467777764
No 322
>2b0f_A Picornain 3C (protease 3C) (P3C); beta barrel, hydrolase-hydrolase inhibitor complex; HET: CA1; NMR {Human rhinovirus 14} PDB: 2in2_A
Probab=97.56 E-value=0.0039 Score=51.40 Aligned_cols=143 Identities=21% Similarity=0.249 Sum_probs=82.9
Q ss_pred eEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCcee-EEE-EEEEEeC-CCCcEEEEEEecCCCC--ccc
Q 019504 59 GSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQK-NFE-GKLVGAD-RAKDLAVLKIEASEDL--LKP 133 (340)
Q Consensus 59 GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~-~~~-a~v~~~d-~~~DlAlL~v~~~~~~--~~~ 133 (340)
-||..|..+ +.|..+|..... .+.+ +|... ..+ ..++..+ -..||++++++..++. +..
T Consensus 25 ~t~LgI~d~-~~vvP~Ha~~~~------------~i~i---~g~~~~v~d~~~l~~~~~~~~eltlv~l~~~~kfRDIrk 88 (182)
T 2b0f_A 25 FTGLGIHDR-VCVIPTHAQPGD------------DVLV---NGQKIRVKDKYKLVDPENINLELTVLTLDRNEKFRDIRG 88 (182)
T ss_dssp EEEEEEEBT-EEEEESTTCCCS------------EEEE---TTEEEEEEEEEEEEETTTEEEEEEEEEECCSSCBCCGGG
T ss_pred EEEEEEeee-EEEEecCCCCcc------------EEEE---CCEEEEeeeeeEEEcCCCCeeEEEEEECCCcccccchHH
Confidence 478888755 999999996542 3322 45321 112 2233212 2579999999876431 222
Q ss_pred eeecCCCCCCCCCEEEEEecCCCCCC-ceeEEEEeeeccccccCCCceecceEEEeeccCCCCccceeecCCCcEEEEEe
Q 019504 134 INVGQSSFLKVGQQCLAIGNPFGFDH-TLTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSKGNLIGINT 212 (340)
Q Consensus 134 ~~l~~~~~~~~G~~v~~iG~p~g~~~-~~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~ 212 (340)
-+.+.... . +.++++- -...+. .+..|.+.....- . ..+.....++.++++..+|+=||||+. +|+++||++
T Consensus 89 -fi~~~~~~-~-~~~lv~n-~~~~p~~~~~vg~~~~~g~i-~-l~G~~t~~~~~Y~~pTk~G~CGgvl~~-~gkIlGIHv 161 (182)
T 2b0f_A 89 -FISEDLEG-V-DATLVVH-SNNFTNTILEVGPVTMAGLI-N-LSSTPTNRMIRYDYATKTGQCGGVLCA-TGKIFGIHV 161 (182)
T ss_dssp -TBCSSCCC-S-EEEEEEE-SSSCEEEEEEEEEEEEEEEE-E-ETTEEEEEEEEEESCCCTTCTTCEEEE-TTEEEEEEE
T ss_pred -hcCCCCCC-C-ceEEEEE-cCCCceEEEEecceEEeceE-c-CCCcEecceEEeccCCCCcccCCeEEe-CCCEEEEEe
Confidence 12222221 2 4455543 223222 2245555432221 1 223344567999999999999999995 899999999
Q ss_pred eeeeCCCCcCceEEEEeh
Q 019504 213 AIITQTGTSAGVGFAIPS 230 (340)
Q Consensus 213 ~~~~~~~~~~~~~~aip~ 230 (340)
++. ...+|+.++
T Consensus 162 aG~------G~~Gfaa~l 173 (182)
T 2b0f_A 162 GGN------GRQGFSAQL 173 (182)
T ss_dssp EEE------TTEEEEEEC
T ss_pred CCC------CCceEehhh
Confidence 862 456777665
No 323
>3q3y_A HEVB EV93 3C protease; cysteine trypsin-like protease, 3C cysteine protease (picorn antiviral compound 1 (AG7404); HET: XNV; 1.32A {Human enterovirus B} SCOP: b.47.1.4 PDB: 3q3x_A* 3ruo_A* 3zyd_A 3zz5_A* 3zz6_A* 3zz7_A* 3zz8_A* 3zz9_A* 3zza_A* 3zzb_A* 2ztx_A 2vb0_A 2zty_A 2ztz_A 2zu3_A* 3zye_A 3zz3_A 2zu1_A 3zz4_A 3zzc_A* ...
Probab=97.52 E-value=0.019 Score=47.37 Aligned_cols=145 Identities=15% Similarity=0.155 Sum_probs=80.9
Q ss_pred eEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEEEEEEeCC---CCcEEEEEEecCCCCcccee
Q 019504 59 GSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEGKLVGADR---AKDLAVLKIEASEDLLKPIN 135 (340)
Q Consensus 59 GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a~v~~~d~---~~DlAlL~v~~~~~~~~~~~ 135 (340)
=||+-|-.+ .+|-..|.-.+ + .+.| +|+...+.-...-.|. ..||++|+++..++ ++-++
T Consensus 27 ft~LgI~dr-~~vvPtHa~~~-~-----------~i~i---~G~~~~v~d~~~L~~~~g~~lElt~v~l~~~~k-FRDIr 89 (191)
T 3q3y_A 27 FTMLGIYDR-WAVLPRHAKPG-P-----------TILM---NDQEVGVLDAKELVDKDGTNLELTLLKLNRNEK-FRDIR 89 (191)
T ss_dssp EEEEEEEBT-EEEEEGGGCCC-S-----------EEEE---TTEEEEEEEEEEEECTTCCEEEEEEEEEECSSC-BCCCG
T ss_pred EEEEEEece-EEEEECCCCCC-C-----------EEEE---CCEEEEeeeEEEEEcCCCCEEEEEEEECCCCcc-ccchH
Confidence 478888644 88889998332 2 4433 5542222111122232 35999999987643 22221
Q ss_pred -ecCCCCCCCCCEEEEEecCCCCCCc-eeEEEEeeeccccccCCCceecceEEEeeccCCCCccceeecCCCcEEEEEee
Q 019504 136 -VGQSSFLKVGQQCLAIGNPFGFDHT-LTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 136 -l~~~~~~~~G~~v~~iG~p~g~~~~-~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~~ 213 (340)
+- .+.........++-+...+.+. +..|.+...... .-++......+.++++...|.=||+|+. .|+++||+++
T Consensus 90 kfi-~~~~~~~~~~~Lv~ns~~~p~~~~~vG~v~~~g~i--nlsg~~t~r~l~Y~~pTk~G~CGgvL~~-~gkIiGIHvg 165 (191)
T 3q3y_A 90 GFL-AREEVEVNEAVLAINTSKFPNMYIPVGQVTDYGFL--NLGGTPTKRMLVYNFPTRAGQCGGVLMS-TGKVLGIHVG 165 (191)
T ss_dssp GGB-CSSCCCEEEEEEEECSSSSTTEEEEEEEEEEEEEE--EETTEEEEEEEEEESCCCTTCTTCEEEE-TTEEEEEEEE
T ss_pred Hhc-ccccccCCceEEEEEcCCCcceEEEeccEEEcceE--eCCCCcccCEEEecCCCCCCccCCEEEe-CCCEEEEEEC
Confidence 11 1122222233333333333332 344655543221 1122233467999999999999999996 7999999998
Q ss_pred eeeCCCCcCceEEEEeh
Q 019504 214 IITQTGTSAGVGFAIPS 230 (340)
Q Consensus 214 ~~~~~~~~~~~~~aip~ 230 (340)
+- ...+|+.++
T Consensus 166 Gn------G~~Gfaa~L 176 (191)
T 3q3y_A 166 GN------GHQGFSAAL 176 (191)
T ss_dssp EE------TTEEEEEEC
T ss_pred CC------CcceEEeeh
Confidence 62 345666654
No 324
>4dcd_A Protease 3C, genome polyprotein; antiviral inhibitors, dipeptidyl inhib hydrolase-hydrolase inhibitor complex; HET: K36; 1.69A {Human poliovirus 1} PDB: 1l1n_A
Probab=97.51 E-value=0.012 Score=48.68 Aligned_cols=144 Identities=15% Similarity=0.211 Sum_probs=80.3
Q ss_pred eEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEEEEEEeCC---CCcEEEEEEecCCCCcccee
Q 019504 59 GSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEGKLVGADR---AKDLAVLKIEASEDLLKPIN 135 (340)
Q Consensus 59 GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a~v~~~d~---~~DlAlL~v~~~~~~~~~~~ 135 (340)
=||.-|-.+ ++|-..|.-.. + .+.+ +|....+.-...-.|. ..||++++++..++ ++-++
T Consensus 32 ft~LgI~d~-~~viP~Ha~p~-~-----------~i~i---~G~~~~v~d~~~l~~~~gv~lElt~V~l~r~~k-FRDIr 94 (190)
T 4dcd_A 32 FTMLGVHDN-VAILPTHASPG-E-----------SIVI---DGKEVEILDAKALEDQAGTNLEITIITLKRNEK-FRDIR 94 (190)
T ss_dssp EEEEEEEBT-EEEEEGGGCCC-S-----------EEEE---TTEEEEEEEEEEEECTTCCEEEEEEEEESSSCC-BCCCG
T ss_pred EEEEEEECc-EEEEeCCCCCC-c-----------EEEE---CCEEEEeeEEEEEecCCCCeEEEEEEEcCCCcc-ccchh
Confidence 578888755 99999995332 1 4443 3542222111122332 35999999997643 22221
Q ss_pred --ecCCCCCCCCCEEEEEecCCCCCCc-eeEEEEeeeccccccCCCceecceEEEeeccCCCCccceeecCCCcEEEEEe
Q 019504 136 --VGQSSFLKVGQQCLAIGNPFGFDHT-LTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSKGNLIGINT 212 (340)
Q Consensus 136 --l~~~~~~~~G~~v~~iG~p~g~~~~-~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~ 212 (340)
|.+. ......+..+=+...+... +..|.+...... ..++....+++.++++..+|+=||||+. +|+++||+.
T Consensus 95 ~fi~~~--~~~~~~~~L~vn~~~~~~~~~~vg~v~~~g~i--~lsg~~t~r~l~Y~~pT~~G~CGg~l~~-~gkIlGIHv 169 (190)
T 4dcd_A 95 PHIPTQ--ITETNDGVLIVNTSKYPNMYVPVGAVTEQGYL--NLGGRQTARTLMYNFPTRAGQCGGVITC-TGKVIGMHV 169 (190)
T ss_dssp GGSCSS--CCCEEEEEEEECSSSSTTEEEEEEEEEEEEEE--EETTEEEEEEEEESSCCCTTCTTCEEEE-TTEEEEEEE
T ss_pred Hhcccc--CCCCCceEEEEecCCCccEEEEeeeeEEeccc--cCCCCcccceEEEccCCCCCccCCEEEe-CCCEEEEEE
Confidence 2111 1223333333232233332 333444433221 1234444567999999999999999995 799999999
Q ss_pred eeeeCCCCcCceEEEEeh
Q 019504 213 AIITQTGTSAGVGFAIPS 230 (340)
Q Consensus 213 ~~~~~~~~~~~~~~aip~ 230 (340)
++- ...+|+.++
T Consensus 170 aG~------G~~G~aa~L 181 (190)
T 4dcd_A 170 GGN------GSHGFAAAL 181 (190)
T ss_dssp EEC------SSCEEEEEC
T ss_pred CCC------CCceEeeeh
Confidence 863 234666554
No 325
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=97.41 E-value=0.00022 Score=52.48 Aligned_cols=38 Identities=16% Similarity=0.194 Sum_probs=34.0
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCC
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSC 315 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~ 315 (340)
..++|.++.++++|++.|. |++||.|++|||+.+....
T Consensus 28 g~~~I~rI~~gg~a~r~g~----------L~vGD~I~~VNG~~v~g~~ 65 (95)
T 3gge_A 28 GYAFIKRIKDGGVIDSVKT----------ICVGDHIESINGENIVGWR 65 (95)
T ss_dssp SCCEEEEECTTSHHHHCTT----------CCTTCEEEEETTEECTTCC
T ss_pred CcEEEEEEcCCChHHhcCC----------CCCCCEEEEECCEEccCCC
Confidence 4578999999999999986 5999999999999998765
No 326
>2bhg_A Foot-and-mouth disease virus 3C protease; chymotrypsin-like cysteine protease, capsid protein, core protein; 1.9A {Foot-and-mouth disease virus} SCOP: b.47.1.4 PDB: 2j92_A 2wv4_A 2wv5_A
Probab=97.37 E-value=0.00078 Score=57.23 Aligned_cols=157 Identities=18% Similarity=0.268 Sum_probs=84.8
Q ss_pred eEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEE---EEEEE----EeCCC---CcEEEEEEecCC
Q 019504 59 GSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNF---EGKLV----GADRA---KDLAVLKIEASE 128 (340)
Q Consensus 59 GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~---~a~v~----~~d~~---~DlAlL~v~~~~ 128 (340)
-+|..|-.+ ++|..+|....... .+.+ ++. .+ ...+. ..|.. .||++++++...
T Consensus 32 ~~~LgI~~r-~~l~P~H~~~~~~~----------~i~i---~g~--~~~~~~~~~~~~e~~v~~~~~~~Dl~~~~l~~~~ 95 (209)
T 2bhg_A 32 CCATGVFGT-AYLVPRHLFAEKYD----------KIML---DGR--AMTDSDYRVFEFEIKVKGQDMLSDAALMVLHRGN 95 (209)
T ss_dssp EEEEEEEBT-EEEEEHHHHTSCCS----------EEEE---TTE--EECGGGEEEECCEECCSSSCEECSEEEEEESSSC
T ss_pred EEEeeEcCC-EEEEEcccCCCCCc----------EEEE---cCE--EEEeeeeEEeeceeeecCCCCceeEEEEECCCCc
Confidence 456777645 89999999865321 3443 232 11 11222 23433 799999997653
Q ss_pred CCccce-e-ecCCCCCCCCCEEEEEecCCCCCCceeEEEEeeeccccccCCCceecceEEEeeccCCCCccceeec---C
Q 019504 129 DLLKPI-N-VGQSSFLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLD---S 203 (340)
Q Consensus 129 ~~~~~~-~-l~~~~~~~~G~~v~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d---~ 203 (340)
+ .+-+ + |.+......++.+..+-++....+.+..|.+...........+.....++.++++..+|+=||+|+- .
T Consensus 96 k-frdi~k~f~~~~~~~~~~~~~~~~n~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~Y~~pT~~G~CGs~lv~~~~~ 174 (209)
T 2bhg_A 96 K-VRDITKHFRDTARMKKGTPVVGVVNNADVGRLIFSGEALTYKDIVVSMDGDTMPGLFAYKAATRAGYAGGAVLAKDGA 174 (209)
T ss_dssp C-BCCCGGGBCSSCEECTTCEEEEEEEETTTEEEEEEEEESSCEECCC-----CCTTEEEEECCCCTTCTTCEEEEEETT
T ss_pred c-cCchhhhcccccccCCCCeEEEEeccCccCceeeeeeEEEccceeeecCCCccccEEEEcCCCCCCcCCCEEEEecCC
Confidence 2 1111 1 2221111345557666665533233334433322221111222234467999999999999999964 3
Q ss_pred CCcEEEEEeeeeeCCCCcCceEEEE--ehHhHHHHHH
Q 019504 204 KGNLIGINTAIITQTGTSAGVGFAI--PSSTVLKIVP 238 (340)
Q Consensus 204 ~G~VVGi~~~~~~~~~~~~~~~~ai--p~~~i~~~l~ 238 (340)
.|+++||++++. .+.+||- +-+.+..+.+
T Consensus 175 ~~kIvGIHvaG~------g~~G~aa~l~r~~~~~~~~ 205 (209)
T 2bhg_A 175 DTFIVGTHSAGG------NGVGYCSCVSRSMLQKMKA 205 (209)
T ss_dssp EEEEEEEEEEEE------TTEEEEEECCHHHHHHHHH
T ss_pred CceEEEEEEccC------CCceEEEEcCHHHHHHHHH
Confidence 689999999873 2345554 4455544443
No 327
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=97.34 E-value=0.00019 Score=58.73 Aligned_cols=36 Identities=22% Similarity=0.218 Sum_probs=33.2
Q ss_pred CcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCC
Q 019504 269 GALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCL 316 (340)
Q Consensus 269 g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d 316 (340)
| +|.+|.++|||+++|| ++||+|++|||+++.+...
T Consensus 109 g-~v~~v~~~s~a~~aGl-----------~~GD~I~~ing~~v~~~~~ 144 (166)
T 1w9e_A 109 G-KITSIVKDSSAARNGL-----------LTEHNICEINGQNVIGLKD 144 (166)
T ss_dssp T-EEEEECTTSHHHHTTC-----------CSSEEEEEETTEECTTCCH
T ss_pred C-EEEEEccCCHHHHcCC-----------CCCCEEEEECCEECCCCCh
Confidence 5 8999999999999999 9999999999999998753
No 328
>2hal_A Hepatitis A protease 3C; 3C protease, inhibitor design; HET: BBL; 1.35A {Hepatitis a virus} SCOP: b.47.1.4 PDB: 2h6m_A* 2h9h_A* 2cxv_A* 2a4o_A* 1hav_A 1qa7_A*
Probab=97.17 E-value=0.0098 Score=50.52 Aligned_cols=177 Identities=12% Similarity=0.079 Sum_probs=92.1
Q ss_pred HHHHHhCCCeEEEEeeeeccccccCCcccccCCceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCcee
Q 019504 25 QLFEKNTYSVVNIFDVTLRPTLNVTGLVEIPEGNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQK 104 (340)
Q Consensus 25 ~~~~~~~~svV~I~~~~~~~~~~~~~~~~~~~~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~ 104 (340)
++...+.+-+|+|........ .....||..|..+ ++|..+|........ .. ..-.+. .+|.
T Consensus 4 ~i~~~v~~N~~~i~~~~~~~~---------~~~~~t~LgI~~r-~~lvP~H~~~~~~~~----~~--~~~~i~-i~g~-- 64 (212)
T 2hal_A 4 EIAGLVRKNLVQFGVGEKNGS---------VRWVMNALGVKDD-WLLVPSHAYKFEKDY----EM--MEFYFN-RGGT-- 64 (212)
T ss_dssp HHHHHHHHHEEEEEEEETTSC---------CEEEEEEEEEEBT-EEEEEGGGTTTSTTG----GG--EEEEEE-ETTE--
T ss_pred eehhhhhccEEEEEEeCCCCC---------cceEEEEEEEcCC-EEEEecccCcccccc----cc--cceEEE-ECCE--
Confidence 445566677888865322221 1134799999866 999999997532110 00 111222 2454
Q ss_pred EEEE-----EEEEeC-CCCcEEEEEEecCCCCcccee--ecCCCCC-CCCC-EEEEEecCCCCCCceeEE------EEee
Q 019504 105 NFEG-----KLVGAD-RAKDLAVLKIEASEDLLKPIN--VGQSSFL-KVGQ-QCLAIGNPFGFDHTLTVG------VISG 168 (340)
Q Consensus 105 ~~~a-----~v~~~d-~~~DlAlL~v~~~~~~~~~~~--l~~~~~~-~~G~-~v~~iG~p~g~~~~~~~G------~vs~ 168 (340)
.++. ++...| ...||++++++..++ .+.+. |.+..++ ..++ .+.+++...+.+.....+ .++.
T Consensus 65 ~~~~~~~~v~~~~~d~~~~Dl~lv~Lp~~~~-FrDIrk~f~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 143 (212)
T 2hal_A 65 YYSISAGNVVIQSLDVGFQDVVLMKVPTIPK-FRDITQHFIKKGDVPRALNRLATLVTTVNGTPMLISEGPLKMEEKATY 143 (212)
T ss_dssp EEEEEGGGSEEECSSSSCCSEEEEECTTSCC-BCCCGGGBCCGGGGGGTTTSCEEEEEEETTEEEEEEECSCEEEEEEEE
T ss_pred EEeeccccceeEeccCCCceEEEEECCCCCc-cCChhHhcCCcccccccccceEEEEeccCCCceEEecccccccceeeE
Confidence 2322 232333 468999999976432 22111 2111122 2233 333332111111111111 1111
Q ss_pred eccccccCCCceec----ceEEEeeccCCCCccceeecC----CCcEEEEEeeeeeCCCCcCceEEEEeh
Q 019504 169 LNRDIFSQAGVTIG----GGIQTDAAINPGNSGGPLLDS----KGNLIGINTAIITQTGTSAGVGFAIPS 230 (340)
Q Consensus 169 ~~~~~~~~~~~~~~----~~i~~d~~i~~G~SGGPl~d~----~G~VVGi~~~~~~~~~~~~~~~~aip~ 230 (340)
.. ....+.... .++.++++..+|+=||||+.. .|+++||+.++. .+.+||.++
T Consensus 144 ~~---i~~~G~~~~~~~~~~~~Y~~pT~~G~CGs~li~~~~~~~~kIiGiHvaG~------g~~G~a~~l 204 (212)
T 2hal_A 144 VH---KKNDGTTVDLTVDQAWRGKGEGLPGMCGGALVSSNQSIQNAILGIHVAGG------NSILVAKLV 204 (212)
T ss_dssp EE---ECTTSCEEEEEEEEEEEEECCCCTTCTTCEEEESCGGGTTCEEEEEEEEE------TTEEEEEEC
T ss_pred EE---ecCCCcccccccceEEEEecCCCCCcCCCeEEEccCCCCceEEEEEeCcC------CCcEEEEee
Confidence 10 111222222 568999999999999999974 799999999873 346777765
No 329
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=97.12 E-value=7.1e-05 Score=70.05 Aligned_cols=56 Identities=14% Similarity=0.243 Sum_probs=0.0
Q ss_pred CcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCC--CCCCCceeEEEeeCCCCceEEEEeC
Q 019504 269 GALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFS--CLSIPSRIYLICAEPNQDHLTCLKS 339 (340)
Q Consensus 269 g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~--~d~~~~~~~~~~~~~~~~~~~~~~~ 339 (340)
+.+|.+|.++|||+++|| ++||+|++|||++|.+. ++ +...+.. .++...++|+.+
T Consensus 316 ~g~I~~V~~gs~A~~aGL-----------~~GD~Il~VNg~~v~~~s~~~---~~~~l~~-~~~~v~L~V~p~ 373 (388)
T 3suz_A 316 NGIICSLMRGGIAERGGV-----------RVGHRIIEINGQSVVATAHEK---IVQALSN-SVGEIHMKTMPA 373 (388)
T ss_dssp -------------------------------------------------------------------------
T ss_pred cCEEEEeecCCHHHHcCC-----------CCCCEEEEECCEECCCCCHHH---HHHHHHh-CCCeEEEEEEec
Confidence 348899999999999999 99999999999999754 43 4444443 334467777543
No 330
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.04 E-value=0.00033 Score=67.94 Aligned_cols=46 Identities=11% Similarity=0.014 Sum_probs=40.9
Q ss_pred CCcEEEeeCCCChhhhcCCCccccCCCCCCcCCcEEEEECCEEccCCCCCCCceeEEEee
Q 019504 268 NGALVLQVPGNSLAAKAGILPTTRGFAGNIILGDIIVAVNNKPVSFSCLSIPSRIYLICA 327 (340)
Q Consensus 268 ~g~~V~~v~~~spa~~~gl~~~~~~~~~~l~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~ 327 (340)
.|++|.+|.++++|..+|+ +.||||++|||++|.+..| ++..+...
T Consensus 415 ~gVvvs~V~~~s~a~~~g~-----------~~gdiI~~vNg~~V~s~~~---l~~~l~~~ 460 (539)
T 4fln_A 415 QIVILSQVLANEVNIGYED-----------MNNQQVLKFNGIPIRNIHH---LAHLIDMC 460 (539)
T ss_dssp CCEEEEEECCCGGGTTCSS-----------CCSEEEEEETTEECCSHHH---HHHHHHTC
T ss_pred eEEEEEEecCCchhhhcCC-----------CCCCEEEeECCEEcCCHHH---HHHHHHHc
Confidence 5899999999999999999 8999999999999999998 66655443
No 331
>1cqq_A Type 2 rhinovirus 3C protease; viral protein, hydrolase; HET: AG7; 1.85A {Human rhinovirus 2} SCOP: b.47.1.4 PDB: 2xya_A*
Probab=97.01 E-value=0.062 Score=44.22 Aligned_cols=144 Identities=16% Similarity=0.222 Sum_probs=80.0
Q ss_pred eEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEEEEEEeCC---CCcEEEEEEecCCCCcccee
Q 019504 59 GSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEGKLVGADR---AKDLAVLKIEASEDLLKPIN 135 (340)
Q Consensus 59 GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a~v~~~d~---~~DlAlL~v~~~~~~~~~~~ 135 (340)
=|+.-|..+ ++|...|..... .+.+ +|....+.-....+|+ ..||++++++..++ .+-++
T Consensus 25 ~t~Lgi~~~-~~lvP~Ha~~~~------------~i~i---~g~~v~i~d~~~l~d~~g~~~El~lv~l~~~~k-frDi~ 87 (180)
T 1cqq_A 25 FTGLGVYDR-FVVVPTHADPGK------------EIQV---DGITTKVIDSYDLYNKNGIKLEITVLKLDRNEK-FRDIR 87 (180)
T ss_dssp EEEEEEEBT-EEEEEGGGCCCS------------EEEE---TTEEEEEEEEEEEECTTSCEEEEEEEEECSSCC-BCCGG
T ss_pred EEEEEEeeE-EEEEccCcCccc------------EEEE---CCEEEEeccceEEEcCCCCeEEEEEEEcCCccc-cCccH
Confidence 467777755 999999998763 2322 3331111111222342 35999999987643 22221
Q ss_pred --ecCCCCCCCCCEEEEEecCCCCCC-ceeEEEEeeeccccccCCCceecceEEEeeccCCCCccceeecCCCcEEEEEe
Q 019504 136 --VGQSSFLKVGQQCLAIGNPFGFDH-TLTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSKGNLIGINT 212 (340)
Q Consensus 136 --l~~~~~~~~G~~v~~iG~p~g~~~-~~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~ 212 (340)
+.+... ...+ .+++-+-..... -+..|.+...... . -.+.....++.++++..+|+=||+|+. +|+++||+.
T Consensus 88 kfip~~~~-~~~~-~~l~~n~~~~~~~~v~~g~~~~~g~i-~-~~g~~~~r~l~Y~~pT~~G~CGsvl~~-~gkIiGIHv 162 (180)
T 1cqq_A 88 RYIPNNED-DYPN-CNLALLANQPEPTIINVGDVVSYGNI-L-LSGNQTARMLKYSYPTKSGYCGGVLYK-IGQVLGIHV 162 (180)
T ss_dssp GGSCSSCC-CEEE-EEEEECTTSSSCEEEEEEEEEECCCE-E-ETTEEECSEEEECCCCCTTCTTCEEEE-TTEEEEEEE
T ss_pred hhcCCCcC-CCCc-eEEEEEcCCCceEEEEccceeeeeeE-e-cCCcEeccEEEecCCCCCCcCCCeEEE-CCCEEEEEE
Confidence 222111 1122 333333222333 2444554432221 1 123344567999999999999999995 679999999
Q ss_pred eeeeCCCCcCceEEEEeh
Q 019504 213 AIITQTGTSAGVGFAIPS 230 (340)
Q Consensus 213 ~~~~~~~~~~~~~~aip~ 230 (340)
++- ...+||.++
T Consensus 163 AG~------G~~G~aa~l 174 (180)
T 1cqq_A 163 GGN------GRDGFSAML 174 (180)
T ss_dssp EEC------SSCEEEEEC
T ss_pred CCC------CCcEEEeee
Confidence 862 345666654
No 332
>2ijd_1 Picornain 3C, RNA-directed RNA polymerase; RNA-dependent RNA polymerase, picornavirus, protease, hydrolase, transferase; 3.40A {Human poliovirus 1} SCOP: b.47.1.4 e.8.1.4
Probab=96.27 E-value=0.1 Score=51.86 Aligned_cols=134 Identities=14% Similarity=0.224 Sum_probs=72.1
Q ss_pred eEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEEEEEEeCC---CCcEEEEEEecCCCCcccee
Q 019504 59 GSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEGKLVGADR---AKDLAVLKIEASEDLLKPIN 135 (340)
Q Consensus 59 GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a~v~~~d~---~~DlAlL~v~~~~~~~~~~~ 135 (340)
-+|..|..+ .+|+..|..... .+.+ +|....+.-....+|. ..||++++++...+ ++.++
T Consensus 25 ~~~l~i~~~-~~l~p~H~~~~~------------~~~i---~g~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~-frdi~ 87 (644)
T 2ijd_1 25 FTMLGVHDN-VAILPTHASPGE------------SIVI---DGKEVAILAAKALADQAGTNLEITIITLKRNEK-FRDIR 87 (644)
T ss_dssp EEEEEEEBT-EEEEEGGGCCCS------------EEEE---TTEEEEEEECCEEECTTSCEEEEEEEEECSSCC-BCCCG
T ss_pred EEEEEEece-EEEEccccCCCc------------eEEE---CCEEEEeccceeEEcCCCCceeEEEEECCCCCC-cCChH
Confidence 467777755 999999988542 2222 2221111111123344 35999999975432 22221
Q ss_pred --ecCCCCCCCCCEEEEEecCCCCCCc-eeEEEEeeeccccccCCCceecceEEEeeccCCCCccceeecCCCcEEEEEe
Q 019504 136 --VGQSSFLKVGQQCLAIGNPFGFDHT-LTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSKGNLIGINT 212 (340)
Q Consensus 136 --l~~~~~~~~G~~v~~iG~p~g~~~~-~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~ 212 (340)
+.+... ...+.++++ ...+.... +..|.+...... ...+.....++.++++..+|+=|+|++. +|+|||||+
T Consensus 88 ~~~~~~~~-~~~~~~l~~-~~~~~~~~~~~~~~~~~~g~~--~~~g~~~~~~~~y~~~T~~G~CG~~l~~-~gkIvGiHv 162 (644)
T 2ijd_1 88 PHIPTQIT-ETNDGVLIV-NTSKYPNMYVPVGAVTEQGYL--NLGGRQTARTLMYNFPTRAGQAGGVITC-TGKVIGMHV 162 (644)
T ss_dssp GGSCSSCC-CEEEEEEEE-CSSSSTTEEEEEEEEEEEEEE--CCTTSCEEEEEEECSCCCTTCTTCEEEE-TTEEEEEEE
T ss_pred HhccCCcc-CCCceEEEE-cCCCCceEEEEeeeeeeccce--ecCCCccccEEEEcCCCCCCCCCchhhh-CCcEEEEEE
Confidence 211111 112333332 22222222 234555432221 1122234467899999999999999985 799999999
Q ss_pred ee
Q 019504 213 AI 214 (340)
Q Consensus 213 ~~ 214 (340)
++
T Consensus 163 aG 164 (644)
T 2ijd_1 163 GG 164 (644)
T ss_dssp EE
T ss_pred cC
Confidence 87
No 333
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A
Probab=95.85 E-value=0.027 Score=39.51 Aligned_cols=21 Identities=24% Similarity=0.333 Sum_probs=18.6
Q ss_pred ceEEEEEcCCCEEEeCccccCC
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGS 79 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~ 79 (340)
...|.+|+++ ||||+|||+..
T Consensus 25 ~CgGslIs~~-~VLTAAHC~~~ 45 (80)
T 2pka_A 25 QCGGVLVNPK-WVLTAAHCKND 45 (80)
T ss_dssp EEEEEEEETT-EEEECGGGCCS
T ss_pred EEEEEEEcCC-EEEECHHHCCC
Confidence 4789999987 99999999965
No 334
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...
Probab=95.67 E-value=0.023 Score=41.65 Aligned_cols=52 Identities=25% Similarity=0.382 Sum_probs=36.8
Q ss_pred ccCCCCccceeecC-CC--cEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHHH
Q 019504 190 AINPGNSGGPLLDS-KG--NLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLIQ 242 (340)
Q Consensus 190 ~i~~G~SGGPl~d~-~G--~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 242 (340)
..+.|+|||||+-. +| .++||+++...... ....+...-+...++|+++.++
T Consensus 41 ~~C~GDSGGPL~~~~~~~~~l~GIvS~g~~c~~-~~~p~vyt~V~~y~~WI~~~~~ 95 (97)
T 1yph_E 41 SSCMGDSGGPLVCKKNGAWTLVGIVSWGSSTCS-TSTPGVYARVTALVNWVQQTLA 95 (97)
T ss_dssp BCCTTCTTCEEEEEETTEEEEEEEEEECCTTCC-TTSEEEEEEHHHHHHHHHHHHH
T ss_pred CCCcCCCCCcEEEEeCCeEEEEEEEEeCCCCCC-CCCCeEEEEHHHhHHHHHHHHc
Confidence 46789999999843 22 79999998754322 2335666778888888887654
No 335
>4ash_A NS6 protease; hydrolase, trypsin-like, calicivirus; 1.58A {Murine norovirus 1}
Probab=95.22 E-value=0.043 Score=42.89 Aligned_cols=143 Identities=17% Similarity=0.169 Sum_probs=79.2
Q ss_pred CcccccCCceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecCC-
Q 019504 50 GLVEIPEGNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEGKLVGADRAKDLAVLKIEASE- 128 (340)
Q Consensus 50 ~~~~~~~~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~- 128 (340)
|+.-..-+.|-||.|++. .++|+.||+..... ++. | .+-..+..+..-+++.+++..+.
T Consensus 8 wsrvv~fgsgwgfwVS~~-~fiTaTHV~p~~~~----------eif-----G----~p~~~i~v~~~GEf~~~rfp~~~r 67 (185)
T 4ash_A 8 WSRVVQFGTGWGFWVSGH-VFITAKHVAPPKGT----------EIF-----G----RKPGDFTVTSSGDFLKYYFTSAVR 67 (185)
T ss_dssp GGGEEEETTEEEEESSSS-EEEEEGGGSCCTTC----------CBT-----T----BCTTSEEEEEETTEEEEEESSCSC
T ss_pred hhheeeccCceEEEEccc-EEEEEEeecCCCch----------hhc-----C----CccceEEEeecCcEEEEEcCCCcC
Confidence 333344467999999987 99999999965442 110 1 11122234445678888887653
Q ss_pred CCccceeecCCCCCCCCCEEEEE-ecCCCC--CCceeEEEEeeeccccccCCCceecceEEE-------eeccCCCCccc
Q 019504 129 DLLKPINVGQSSFLKVGQQCLAI-GNPFGF--DHTLTVGVISGLNRDIFSQAGVTIGGGIQT-------DAAINPGNSGG 198 (340)
Q Consensus 129 ~~~~~~~l~~~~~~~~G~~v~~i-G~p~g~--~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~-------d~~i~~G~SGG 198 (340)
..+.-..|... ...|+-+.++ -++.+. ...+..|.+....-.-..-.+ ...++.+ |....||+-|.
T Consensus 68 pdvsgmiLEeg--~peGtV~svlikR~sgeliPlavRmgt~as~kIqGk~v~g--qtGmlltganaK~mdLGT~PGDCGc 143 (185)
T 4ash_A 68 PDIPAMVLENG--CQEGVVASVLVKRASGEMLALAVRMGSQAAIKIGSAVVHG--QTGMLLTGSNAKAQDLGTIPGDAGC 143 (185)
T ss_dssp TTSCCCEECSS--CCTTCEEEEEEECTTCCEEEEEEEEEEEEEEEETTEEEEE--EEEEECC-------CCSCCTTCTTC
T ss_pred CCCcceEEecC--CCCCcEEEEEEecCCCCcceeEEEecceeeeEEeeeEecc--eeeeEEecCCcccCcCCCCCCCCCC
Confidence 23555666432 3347777553 344332 223444554433211100000 0122222 44567999999
Q ss_pred eeecCC---CcEEEEEeeeee
Q 019504 199 PLLDSK---GNLIGINTAIIT 216 (340)
Q Consensus 199 Pl~d~~---G~VVGi~~~~~~ 216 (340)
|-+-.. --|+|++++...
T Consensus 144 PYvykrgn~~vv~GVHtAatr 164 (185)
T 4ash_A 144 PYVYKKGNTWVVIGVHVAATR 164 (185)
T ss_dssp EEEEEETTEEEEEEEEEEECS
T ss_pred ceEEeeCCceEEEEEEEeecc
Confidence 998553 359999998654
No 336
>2fyq_A Chymotrypsin-like cysteine proteinase; protease, norovirus, calicivirus, viral protein; 1.50A {Norwalk virus} PDB: 2fyr_A 2iph_A* 1wqs_A*
Probab=94.34 E-value=0.091 Score=41.25 Aligned_cols=138 Identities=18% Similarity=0.253 Sum_probs=76.3
Q ss_pred cCCceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecCC-CCccc
Q 019504 55 PEGNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEGKLVGADRAKDLAVLKIEASE-DLLKP 133 (340)
Q Consensus 55 ~~~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~-~~~~~ 133 (340)
.-+.|-||.|++. .++|+.||+..... ++. | .+-..+..+..-+++.+++..+. ..+.-
T Consensus 24 ~fgsgwgfwVS~~-~fIT~tHV~p~~~~----------e~f-----G----~p~~~i~v~~~GEf~~~rfpk~~rpdvsg 83 (194)
T 2fyq_A 24 KFGSGWGFWVSPT-VFITTTHVVPTGVK----------EFF-----G----EPLSSIAIHQAGEFTQFRFSKKMRPDLTG 83 (194)
T ss_dssp EETTEEEEESSSS-EEEEEGGGSCSSCS----------EET-----T----EEGGGEEEEEETTEEEEEESSCSCTTSCC
T ss_pred eccCceeEEEccc-EEEEEeeecCCCCh----------hhc-----C----ceeeeEEEeecCcEEEEEcCCCcCCCCcc
Confidence 3456999999987 99999999976542 221 1 12223344455678888887652 23555
Q ss_pred eeecCCCCCCCCCEEEE-EecCCCC--CCceeEEEEeeeccccccCCCceecceEEE-------eeccCCCCccceeecC
Q 019504 134 INVGQSSFLKVGQQCLA-IGNPFGF--DHTLTVGVISGLNRDIFSQAGVTIGGGIQT-------DAAINPGNSGGPLLDS 203 (340)
Q Consensus 134 ~~l~~~~~~~~G~~v~~-iG~p~g~--~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~-------d~~i~~G~SGGPl~d~ 203 (340)
+.|... ...|+-+.+ +-++.+. +..+..|.+....-.-..-.+ ...++.+ |....||+-|.|-+-.
T Consensus 84 miLEeg--~peGtV~silikR~sgellPlaVRmgt~as~kIqGk~v~g--qtGmlltganaK~mdLGT~PGDCGcPYvyk 159 (194)
T 2fyq_A 84 MVLEEG--CPEGTVCSVLIKRDSGELLPLAVRMGAIASMRIQGRLVHG--QSGMLLTGANAKGMDLGTIPGDCGAPYVHK 159 (194)
T ss_dssp CEECSS--CCTTCEEEEEEECTTSCEEEEEEEEEEEEEEEETTEEEEE--EEEEECC-----------CGGGTTCEEEEE
T ss_pred eEEecC--CCCCcEEEEEEecCCCCcceEEEEecceeeeEEeeeEecc--eeeeEEecCCcccCcCCCCCCCCCCceEEe
Confidence 666332 334777654 3444442 234455555443211100000 0122222 3445689999999855
Q ss_pred C---CcEEEEEeeeee
Q 019504 204 K---GNLIGINTAIIT 216 (340)
Q Consensus 204 ~---G~VVGi~~~~~~ 216 (340)
. --|+|++++...
T Consensus 160 rgndwvv~GVH~Aatr 175 (194)
T 2fyq_A 160 RGNDWVVCGVHAAATK 175 (194)
T ss_dssp ETTEEEEEEEEEEECS
T ss_pred eCCceEEEEEEEeecc
Confidence 4 359999998654
No 337
>1wxr_A Haemoglobin protease; hemoglobine protease, autotransporter, beta helix, heme uptake, spate, hydrolase; 2.20A {Escherichia coli} PDB: 3ak5_A
Probab=93.49 E-value=0.33 Score=50.09 Aligned_cols=80 Identities=14% Similarity=0.125 Sum_probs=48.7
Q ss_pred CceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEEEEEEeC--CCCcEEEEEEecCCCCccce
Q 019504 57 GNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEGKLVGAD--RAKDLAVLKIEASEDLLKPI 134 (340)
Q Consensus 57 ~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a~v~~~d--~~~DlAlL~v~~~~~~~~~~ 134 (340)
..|.+.+|+++ ||+|.+|.... . . |.|.+++ ..|.- +... +..|+++.|++.......|+
T Consensus 56 ~~G~aTLI~pq-YiVSvaHn~gy-~-----------~--v~fG~~~-n~Y~i--V~rnn~~~~Dy~~pRL~K~VTEvaP~ 117 (1048)
T 1wxr_A 56 EIGVATLINPQ-YIASVKHNGGY-T-----------N--VSFGDGE-NRYNI--VDRNNAPSLDFHAPRLDKLVTEVAPT 117 (1048)
T ss_dssp TTCCCEEEETT-EEEBCTTCCSC-C-----------E--ECCTTSC-CCEEE--EECCBCSSSSCBCCEESSCCCSSCCC
T ss_pred CCceEEEEcCc-EEEEeeecCCC-c-----------e--EEeCCCc-ceEEE--EeeCCCCCCCeeeeecccccccccce
Confidence 45888999988 99999996442 1 2 3444432 23432 3322 23599999999875445666
Q ss_pred eecCCC-------CCCCCCEEEEEecC
Q 019504 135 NVGQSS-------FLKVGQQCLAIGNP 154 (340)
Q Consensus 135 ~l~~~~-------~~~~G~~v~~iG~p 154 (340)
.+.... +.......+-+|..
T Consensus 118 ~~t~~g~~~~~y~d~ery~~f~RvGsG 144 (1048)
T 1wxr_A 118 AVTAQGAVAGAYLDKERYPVFYRLGSG 144 (1048)
T ss_dssp CBCSSCSCTTGGGCTTTCCCEEEEECS
T ss_pred eeccccCccccccccccCceEEEECCc
Confidence 553221 23456666777743
No 338
>2fp7_B Serine protease NS3; flavivirus, NS3 protease, NS2B cofactor; HET: OAR; 1.68A {West nile virus} SCOP: b.47.1.3
Probab=93.12 E-value=0.05 Score=43.31 Aligned_cols=115 Identities=19% Similarity=0.177 Sum_probs=61.5
Q ss_pred ceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecCCCCccceeec
Q 019504 58 NGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEGKLVGADRAKDLAVLKIEASEDLLKPINVG 137 (340)
Q Consensus 58 ~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~~~~~~~~l~ 137 (340)
.|-|+.- +|-+=|-.||-.++. +. .+++ .+ ....-|-..|++ ..-.+- +|.
T Consensus 21 ~GVGv~~--~GVFHTmWHVTrGa~------------l~---~~g~--~~--~P~wa~V~~Dli--sYGG~W------kL~ 71 (172)
T 2fp7_B 21 AGAGVMV--EGVFHTLWHTTKGAA------------LM---SGEG--RL--DPYWGSVKEDRL--CYGGPW------KLQ 71 (172)
T ss_dssp EEEEEEE--TTEEEEEHHHHTTCC------------EE---ETTE--EE--CEEEEETTTTEE--EESSSC------CCC
T ss_pred eeeEEee--CCEEEeeeeecCCce------------EE---ECCc--Ee--cceeehheecee--ecCCcc------ccC
Confidence 3777765 489999999999874 22 1232 11 122335555653 333322 231
Q ss_pred CCCCCCCCCEEEEEecCCCCCCc---eeEEEEeeeccccccCCCceecceEEEeeccCCCCccceeecCCCcEEEEEeee
Q 019504 138 QSSFLKVGQQCLAIGNPFGFDHT---LTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSKGNLIGINTAI 214 (340)
Q Consensus 138 ~~~~~~~G~~v~~iG~p~g~~~~---~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~~~ 214 (340)
....-+++|.++-++-+.... ...|+..- ..+ . +-.+.....+|.||+|++|.+|+|||+.-..
T Consensus 72 --~kW~g~~eVql~a~~Pgk~~~n~qt~Pg~f~~-------~~G-e---igaI~lD~p~GtSGSPIin~~G~vVGLYGNG 138 (172)
T 2fp7_B 72 --HKWNGHDEVQMIVVEPGKNVKNVQTKPGVFKT-------PEG-E---IGAVTLDYPTGTSGSPIVDKNGDVIGLYGNG 138 (172)
T ss_dssp --CCCCSSSCEEEEECCTTSCCEEEEECCEEEEE-------TTE-E---EEEECCCCCGGGTTCEEECTTSCEEEESCCE
T ss_pred --cccCCCceEEEEEECCCCceEEEEccCceEec-------CCC-e---EEEEECCCCCCCCCCceEccCCcEEEEecce
Confidence 122345666666665443321 11122111 111 1 1222334457999999999999999995544
No 339
>2fom_B Polyprotein; flavivirus, NS3 protease, NS2B cofactor, viral protein-prote complex; 1.50A {Dengue virus 2} SCOP: b.47.1.3 PDB: 1df9_A 2qid_A 1bef_A
Probab=92.74 E-value=0.06 Score=43.44 Aligned_cols=135 Identities=22% Similarity=0.278 Sum_probs=71.9
Q ss_pred HHhCCCeEEEEeeeeccccccCCcccccCCceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEE
Q 019504 28 EKNTYSVVNIFDVTLRPTLNVTGLVEIPEGNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFE 107 (340)
Q Consensus 28 ~~~~~svV~I~~~~~~~~~~~~~~~~~~~~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~ 107 (340)
..+...|-+|....... ... .|-|+.- +|-+=|-.||-.++. +.. +++ .+
T Consensus 16 ~~l~dGvYRI~~~gl~G------~~Q----~GVGv~~--~GVFHTmWHVTrGa~------------l~~---~g~--~l- 65 (185)
T 2fom_B 16 AELEDGAYRIKQKGILG------YSQ----IGAGVYK--EGTFHTMWHVTRGAV------------LMH---KGK--RI- 65 (185)
T ss_dssp --CCSEEEEEEEEETTE------EEE----EEEEEEE--TTEEEEEHHHHTTCC------------EEE---TTE--EE-
T ss_pred ccCCCcEEEEEeccccc------cce----eeeEEee--CCEEEeeeeecCcce------------EEE---CCc--Ee-
Confidence 45788899987543332 211 3777765 489999999999874 221 222 11
Q ss_pred EEEEEeCCCCcEEEEEEecCCCCccceeecCCCCCCCCCEEEEEecCCCCCCce---eEEEEeeeccccccCCCceecce
Q 019504 108 GKLVGADRAKDLAVLKIEASEDLLKPINVGQSSFLKVGQQCLAIGNPFGFDHTL---TVGVISGLNRDIFSQAGVTIGGG 184 (340)
Q Consensus 108 a~v~~~d~~~DlAlL~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~~~~---~~G~vs~~~~~~~~~~~~~~~~~ 184 (340)
....-|-..|++ ..-.+- +|. . .-.-+++|.++-++-+..... ..|+.. ...+ . +
T Consensus 66 -~P~wa~V~~Dli--sYGG~W------kL~-~-kW~g~~eVql~av~Pgk~~~nvQt~Pg~f~-------~~~G-e---i 123 (185)
T 2fom_B 66 -EPSWADVKKDLI--SYGGGW------KLE-G-EWKEGEEVQVLALEPGKNPRAVQTKPGLFK-------TNTG-T---I 123 (185)
T ss_dssp -CEEEEETTTTEE--EESSSC------CCC-C-CCCTTCCEEEEECCTTSCCEEEEECCEEEE-------CSSC-E---E
T ss_pred -cceeehheecee--ecCCcc------cCc-c-ccCCCceEEEEEECCCCceEEEEcCCceee-------cCCC-e---E
Confidence 122335555653 333332 231 1 223356666666654433211 112211 1111 1 1
Q ss_pred EEEeeccCCCCccceeecCCCcEEEEEeee
Q 019504 185 IQTDAAINPGNSGGPLLDSKGNLIGINTAI 214 (340)
Q Consensus 185 i~~d~~i~~G~SGGPl~d~~G~VVGi~~~~ 214 (340)
-.+.....+|.||+|++|.+|+|||+.-..
T Consensus 124 gaI~lD~p~GTSGSPIin~~G~vvGLYGNG 153 (185)
T 2fom_B 124 GAVSLDFSPGTSGSPIVDKKGKVVGLYGNG 153 (185)
T ss_dssp EEECCCSCGGGTTCEEECTTSCEEEETTCE
T ss_pred EEEECCCCCCCCCCceEccCCcEEEEecce
Confidence 223334457999999999999999995544
No 340
>3e90_B NS3 protease; trypsin-like serine protease, protease inhibitor, catalytic histidine, induced FIT, ATP-binding, capsid protein, helicase; HET: NKK; 2.45A {West nile virus} SCOP: b.47.1.3
Probab=92.72 E-value=0.067 Score=43.42 Aligned_cols=135 Identities=20% Similarity=0.217 Sum_probs=74.5
Q ss_pred HhCCCeEEEEeeeeccccccCCcccccCCceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEE
Q 019504 29 KNTYSVVNIFDVTLRPTLNVTGLVEIPEGNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEG 108 (340)
Q Consensus 29 ~~~~svV~I~~~~~~~~~~~~~~~~~~~~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a 108 (340)
.+...|-+|....... ... .|-|+.- +|-+=|-+||-.++. +.. +++ .+
T Consensus 21 ~l~dGVYRI~~~gl~G------~~Q----~GVGv~k--~GVFHTMWHVTrGa~------------l~~---~g~--~l-- 69 (198)
T 3e90_B 21 DTTTGVYRIMTRGLLG------SYQ----AGAGVMV--EGVFHTLWHTTKGAA------------LMS---GEG--RL-- 69 (198)
T ss_dssp CCCSEEEEEEEEETTE------EEE----EEEEEEE--TTEEEECHHHHTTCC------------EEE---TTE--EE--
T ss_pred cCCCceEEEEeccccc------cce----eeeEEee--CCEEEeeeeecCcce------------EEE---CCc--Ee--
Confidence 5667888887543322 211 3677665 489999999999874 221 232 11
Q ss_pred EEEEeCCCCcEEEEEEecCCCCccceeecCCCCCCCCCEEEEEecCCCCCCc---eeEEEEeeeccccccCCCceecceE
Q 019504 109 KLVGADRAKDLAVLKIEASEDLLKPINVGQSSFLKVGQQCLAIGNPFGFDHT---LTVGVISGLNRDIFSQAGVTIGGGI 185 (340)
Q Consensus 109 ~v~~~d~~~DlAlL~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~~~---~~~G~vs~~~~~~~~~~~~~~~~~i 185 (340)
....-|-..|++ .+-.+- +|. ....-.++|.++-++-+.... ...|+..- ..+ . ...+
T Consensus 70 ~P~WasV~~Dli--sYGG~W------kL~--~~W~g~~eVQl~Av~Pgk~~~~~Qt~PG~f~~-------~~g-~-iGaV 130 (198)
T 3e90_B 70 DPYWGSVKEDRL--CYGGPW------KLQ--HKWNGQDEVQMIVVEPGKNVKNVRTKPGVFKT-------PEG-E-IGAV 130 (198)
T ss_dssp CEEEEETTTTEE--EESSSC------CCC--CCCCSSSCEEEEECCTTSCCEEEEECCEEEEE-------TTE-E-EEEE
T ss_pred cceeehheecee--ecCCcc------cCC--cccCCCceEEEEEECCCCceEEEEeCCeEEEc-------CCC-e-EEEE
Confidence 222345556653 333332 231 122223778887776654332 22233221 011 1 1223
Q ss_pred EEeeccCCCCccceeecCCCcEEEEEeeee
Q 019504 186 QTDAAINPGNSGGPLLDSKGNLIGINTAII 215 (340)
Q Consensus 186 ~~d~~i~~G~SGGPl~d~~G~VVGi~~~~~ 215 (340)
..| ..+|.||+|++|.+|+|||+.-..+
T Consensus 131 ~lD--~p~GTSGSPIin~~G~VVGLYGNGv 158 (198)
T 3e90_B 131 TLD--FPTGTSGSPIVDKNGDVIGLYGNGV 158 (198)
T ss_dssp CCC--CCTTCTTCEEECTTCCEEEECCCEE
T ss_pred ECC--CCCCCCCCceecCCCcEEEEecceE
Confidence 333 4589999999999999999955444
No 341
>3u1j_B Serine protease NS3; serine protease, ER MEM hydrolase-hydrolase inhibitor complex; 1.80A {Dengue virus 3} SCOP: b.47.1.3 PDB: 3u1i_B
Probab=92.52 E-value=0.075 Score=42.97 Aligned_cols=136 Identities=21% Similarity=0.294 Sum_probs=74.3
Q ss_pred HhCCCeEEEEeeeeccccccCCcccccCCceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEE
Q 019504 29 KNTYSVVNIFDVTLRPTLNVTGLVEIPEGNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEG 108 (340)
Q Consensus 29 ~~~~svV~I~~~~~~~~~~~~~~~~~~~~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a 108 (340)
.+...|-||....... ... .|-|+.- +|-+=|-.||-.++. +.. +++ .+
T Consensus 26 ~~~dGVYRI~~~gl~G------~~Q----~GVGv~k--~GVFHTMWHVTrGa~------------l~~---~g~--~l-- 74 (191)
T 3u1j_B 26 ELEEGVYRIKQQGIFG------KTQ----VGVGVQK--EGVFHTMWHVTRGAV------------LTH---NGK--RL-- 74 (191)
T ss_dssp CCCSEEEEEEEEETTE------EEE----EEEEEEE--TTEEEEEHHHHTTCC------------EEE---TTE--EE--
T ss_pred cCCCceEEEEeccccc------cce----eeeEEee--CCEEEeeeeecCcce------------EEE---CCc--Ee--
Confidence 5667888887543322 211 3677665 489999999999874 221 222 11
Q ss_pred EEEEeCCCCcEEEEEEecCCCCccceeecCCCCCCCCCEEEEEecCCCCCCc---eeEEEEeeeccccccCCCceecceE
Q 019504 109 KLVGADRAKDLAVLKIEASEDLLKPINVGQSSFLKVGQQCLAIGNPFGFDHT---LTVGVISGLNRDIFSQAGVTIGGGI 185 (340)
Q Consensus 109 ~v~~~d~~~DlAlL~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~~~---~~~G~vs~~~~~~~~~~~~~~~~~i 185 (340)
....-|-..|++ .+-.+- +|. . .-.-.++|.++-++-+.... ...|+..- ..+ . ...+
T Consensus 75 ~P~wasV~~Dli--sYGG~W------kL~-~-~W~g~~eVQl~Av~Pgk~~~~~Qt~PG~f~~-------~~g-~-iGaV 135 (191)
T 3u1j_B 75 EPNWASVKKDLI--SYGGGW------RLS-A-QWQKGEEVQVIAVEPGKNPKNFQTMPGTFQT-------TTG-E-IGAI 135 (191)
T ss_dssp CEEEEETTTTEE--EESSSC------CCC-C-CCCTTCCEEEEECCTTSCCEEEEECCEEEEC-------SSC-E-EEEE
T ss_pred cceeecceecee--ecCCcc------cCC-c-ccCCCceEEEEEECCCCceEEEEeCCeEEEc-------CCC-e-EEEE
Confidence 222345556653 333332 231 1 11224677777776554332 22232211 111 1 1223
Q ss_pred EEeeccCCCCccceeecCCCcEEEEEeeeee
Q 019504 186 QTDAAINPGNSGGPLLDSKGNLIGINTAIIT 216 (340)
Q Consensus 186 ~~d~~i~~G~SGGPl~d~~G~VVGi~~~~~~ 216 (340)
.. ...+|.||+|++|.+|+|||+.-..+.
T Consensus 136 ~l--D~p~GTSGSPIin~~G~VVGLYGNG~~ 164 (191)
T 3u1j_B 136 AL--DFKPGTSGSPIINREGKVVGLYGNGVV 164 (191)
T ss_dssp CC--CCCTTCTTCEEECTTSCEEEECCBEEE
T ss_pred EC--CCCCCCCCCceecCCCcEEEEecCeEE
Confidence 33 345899999999999999999654443
No 342
>2ggv_B NS3, non-structural protein 3; beta barrel, serine protease, viral protease, flavivirus, hydrolase; 1.80A {West nile virus} PDB: 2ijo_B
Probab=92.32 E-value=0.11 Score=41.83 Aligned_cols=135 Identities=19% Similarity=0.172 Sum_probs=73.0
Q ss_pred HhCCCeEEEEeeeeccccccCCcccccCCceEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEE
Q 019504 29 KNTYSVVNIFDVTLRPTLNVTGLVEIPEGNGSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEG 108 (340)
Q Consensus 29 ~~~~svV~I~~~~~~~~~~~~~~~~~~~~~GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a 108 (340)
.+...|-+|...... +... .|-|+.- +|-+=|-.||-.++. +.. +++ .+
T Consensus 16 ~l~dGvYRI~~~gl~------G~~Q----~GVGv~~--~GVFHTmWHVTrGa~------------L~~---~g~--~l-- 64 (185)
T 2ggv_B 16 DTTTGVYRIMTRGLL------GSYQ----AGAGVMV--EGVFHTLWATTKGAA------------LMS---GEG--RL-- 64 (185)
T ss_dssp CCCSEEEEEEEECSS------SEEE----EEEEEEE--TTEEEECHHHHTTCC------------EEE---TTE--EE--
T ss_pred cCCCcEEEEEecccc------ccce----eeeEEee--CCEEEeeeeecCcce------------EEE---CCc--Ee--
Confidence 366778888753322 2222 3777766 489999999999874 221 232 11
Q ss_pred EEEEeCCCCcEEEEEEecCCCCccceeecCCCCCCCCCEEEEEecCCCCCCc---eeEEEEeeeccccccCCCceecceE
Q 019504 109 KLVGADRAKDLAVLKIEASEDLLKPINVGQSSFLKVGQQCLAIGNPFGFDHT---LTVGVISGLNRDIFSQAGVTIGGGI 185 (340)
Q Consensus 109 ~v~~~d~~~DlAlL~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~g~~~~---~~~G~vs~~~~~~~~~~~~~~~~~i 185 (340)
....-|-..|++ ..-.+- +|. ....-+++|.++-++-+.... ...|+..- ..+ . +-
T Consensus 65 ~P~wasV~~Dli--sYGG~W------kL~--~kW~g~~eVql~av~Pgk~~~nvQt~Pg~f~~-------~~G-e---ig 123 (185)
T 2ggv_B 65 DPYWGSVKEDRL--CYGGPW------QLQ--HKWNGQDEVQMIVVEPGRNVKNVQTKPGVFKT-------PEG-E---IG 123 (185)
T ss_dssp CEEEEETTTTEE--EESSSC------CCC--CCCCSSSCEEEEECCTTSCCEEEEECCEEEEE-------TTE-E---EE
T ss_pred cceeehhhccee--ecCCcc------cCc--cccCCCceEEEEEECCCCceEEEEccCceEec-------CCC-e---EE
Confidence 122345555653 333322 231 223345667666665543321 11122111 111 1 12
Q ss_pred EEeeccCCCCccceeecCCCcEEEEEeeee
Q 019504 186 QTDAAINPGNSGGPLLDSKGNLIGINTAII 215 (340)
Q Consensus 186 ~~d~~i~~G~SGGPl~d~~G~VVGi~~~~~ 215 (340)
.+......|.||+|++|.+|+|||+.-..+
T Consensus 124 AI~lD~p~GTSGSPIin~~G~vvGLYGNGv 153 (185)
T 2ggv_B 124 AVTLDFPTGTSGSPIVDKNGDVIGLYGNGV 153 (185)
T ss_dssp EECCCCCGGGTTCEEECTTSCEEEEEEEEE
T ss_pred EEECCCCCCCCCCceEcCCCcEEEEecceE
Confidence 223344579999999999999999976553
No 343
>3lkw_A Fusion protein of nonstructural protein 2B and nonstructural protein 3; viral protease, serine protease, NS3 protease, NS2B cofactor; 2.00A {Dengue virus 1} PDB: 3l6p_A
Probab=91.68 E-value=0.1 Score=43.56 Aligned_cols=115 Identities=23% Similarity=0.378 Sum_probs=62.8
Q ss_pred eEEEEEcCCCEEEeCccccCCCCCCCCCCCccEEEEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecCCCCccceeecC
Q 019504 59 GSGVVWDGKGHIVTNFHVIGSALSRKPAEGQVVARVNILASDGVQKNFEGKLVGADRAKDLAVLKIEASEDLLKPINVGQ 138 (340)
Q Consensus 59 GsGfiI~~~G~IlT~~Hvv~~~~~~~~~~~~~~~~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~~~~~~~~l~~ 138 (340)
|-|+.- +|-+=|-.||-.++. +.. +++ .+ ....-|-..|++ .+-.+- +|.
T Consensus 87 GVGv~~--~GVFHTmWHVTrGa~------------l~~---~g~--~~--~P~wa~V~~Dli--sYGG~W------kL~- 136 (236)
T 3lkw_A 87 GVGVFQ--EGVFHTMWHVTRGAV------------LMY---QGK--RL--EPSWASVKKDLI--SYGGGW------RFQ- 136 (236)
T ss_dssp EEEEEE--TTEEEECHHHHTTCC------------EEE---TTE--EE--CEEEEETTTTEE--EESSSC------CCC-
T ss_pred eeEEee--CCEEEEeeeecCcce------------EEE---CCc--Ee--cceeehheecee--ecCCCc------cCC-
Confidence 667665 589999999999874 221 232 11 122335555653 333332 231
Q ss_pred CCCCCCCCEEEEEecCCCCCCc---eeEEEEeeeccccccCCCceecceEEEeeccCCCCccceeecCCCcEEEEEeeee
Q 019504 139 SSFLKVGQQCLAIGNPFGFDHT---LTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSKGNLIGINTAII 215 (340)
Q Consensus 139 ~~~~~~G~~v~~iG~p~g~~~~---~~~G~vs~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~~~~ 215 (340)
. .-.-.+.|.++-++-+.... ...|+..- ..+ . ...+..| ..+|.||+|++|.+|+|||+.-.++
T Consensus 137 ~-~W~g~~eVqv~A~~Pg~~~~~~qt~PG~~~~-------~~g-~-igav~lD--~p~GTSGSPIin~~G~VvGLYGnG~ 204 (236)
T 3lkw_A 137 G-SWNAGEEVQVIAVEPGKNPKNVQTAPGTFKT-------PEG-E-VGAIALD--FKPGTAGSPIVNREGKIVGLYGNGV 204 (236)
T ss_dssp C-CCCTTCCEEEEECCTTSCCEEEEECCEEEEE-------TTE-E-EEEECCC--CCTTCTTCEEECTTSCEEEESCCEE
T ss_pred c-ccCCCceEEEEEECCCCceEEEEeCCeEEEc-------CCC-e-EEEEECC--CCCCCCCCceecCCCcEEEEecceE
Confidence 1 11224677777776554332 22233221 011 1 1223333 4589999999999999999954443
No 344
>1vcp_A Semliki forest virus capsid protein; virus coat protein, polyprotein, transmembrane, glycoprotein, nucleocapsid protein, viral protein; 3.00A {Semliki forest virus} SCOP: b.47.1.3 PDB: 1dyl_A 1vcq_A
Probab=91.06 E-value=0.29 Score=36.74 Aligned_cols=30 Identities=33% Similarity=0.609 Sum_probs=24.8
Q ss_pred eeccCCCCccceeecCCCcEEEEEeeeeeC
Q 019504 188 DAAINPGNSGGPLLDSKGNLIGINTAIITQ 217 (340)
Q Consensus 188 d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~ 217 (340)
...-.+|+||-|++|..|+||+|+-.+...
T Consensus 93 ~G~g~~GdSGrpI~Dn~GrVVaIVlGG~~e 122 (149)
T 1vcp_A 93 TGAGKPGDSGRPIFDNKGRVVAIVLGGANE 122 (149)
T ss_dssp TTSCCTTCTTCEEECTTSCEEEEEEEEEEC
T ss_pred ccCCCCCCCCCccCcCCCcEEEEEecCCCC
Confidence 344568999999999999999999876643
No 345
>2yew_A Capsid protein, coat protein; alphavirus, molecular dynamics; 5.00A {Barmah forest virus}
Probab=90.80 E-value=0.26 Score=41.01 Aligned_cols=30 Identities=27% Similarity=0.566 Sum_probs=24.9
Q ss_pred eeccCCCCccceeecCCCcEEEEEeeeeeC
Q 019504 188 DAAINPGNSGGPLLDSKGNLIGINTAIITQ 217 (340)
Q Consensus 188 d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~ 217 (340)
...--+|+||-|+||..|+||+|+-.+...
T Consensus 197 ~G~G~~GDSGRpI~DN~GrVVaIVLGGanE 226 (253)
T 2yew_A 197 TGSGKPGDSGRPIFDNTGKVVAIVLGGANE 226 (253)
T ss_dssp TTSCCSSCTTCEEECSSCBEEEEEEEEEEC
T ss_pred cCCCCCCCCCCccccCCCcEEEEEecCCCc
Confidence 334568999999999999999999887653
No 346
>4agk_A Capsid protein, coat protein, C; hydrolase, viral protein; 1.81A {Aura virus} PDB: 4agj_A 1kxa_A 2snw_A 1svp_A 1kxb_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=90.76 E-value=0.22 Score=37.85 Aligned_cols=30 Identities=33% Similarity=0.598 Sum_probs=24.8
Q ss_pred eeccCCCCccceeecCCCcEEEEEeeeeeC
Q 019504 188 DAAINPGNSGGPLLDSKGNLIGINTAIITQ 217 (340)
Q Consensus 188 d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~ 217 (340)
.....+|+||-|++|..|+||+|+-.+...
T Consensus 101 ~g~g~~GdSGrPi~Dn~GrVVaIVlGG~ne 130 (158)
T 4agk_A 101 TGAGGPGDSGRPILDNSGKVVAIVLGGANE 130 (158)
T ss_dssp TTSSCTTCTTCEEECTTSCEEEEEEEEEEC
T ss_pred cccCCCCCCCCccccCCCCEEEEEecCCCc
Confidence 334568999999999999999999876643
No 347
>1svp_A Sindbis virus capsid protein; chymotrypsin-like serine, mutant, coat protein, viral protein; 2.00A {Sindbis virus} SCOP: b.47.1.3 PDB: 1kxb_A 1kxa_A 2snw_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=90.73 E-value=0.31 Score=37.14 Aligned_cols=29 Identities=21% Similarity=0.457 Sum_probs=24.3
Q ss_pred eccCCCCccceeecCCCcEEEEEeeeeeC
Q 019504 189 AAINPGNSGGPLLDSKGNLIGINTAIITQ 217 (340)
Q Consensus 189 ~~i~~G~SGGPl~d~~G~VVGi~~~~~~~ 217 (340)
..--+|+||-|++|..|+||+|+-.+...
T Consensus 103 GvG~~GDSGRpI~DN~GrVVaivlgg~~e 131 (161)
T 1svp_A 103 GVGGRGDAGRPIMDNSGRVVAIVLGGADE 131 (161)
T ss_dssp TSCCTTCTTCEEECTTSCEEEEEEEEEEC
T ss_pred cCCCCCCCCCccCcCCCcEEEEEecCCCC
Confidence 34568999999999999999999876643
No 348
>3su6_A NS3 protease, NS4A protein; drug resistance, drug design, protease inhibitors, serine PR viral protein, hydrolase-inhibitor complex; HET: SU3; 1.10A {Hepatitis c virus} PDB: 3su2_A* 3sv9_A* 3m5l_A* 3m5m_A* 3m5n_A 3m5o_A 3rc4_A 3rc5_A 3rc6_A 3su3_A* 3su4_A* 3sv6_A* 3sv7_A* 3su1_A* 3su5_A* 3sv8_A* 3su0_A* 2p59_A* 2qv1_A 1a1q_A ...
Probab=90.37 E-value=0.38 Score=38.80 Aligned_cols=43 Identities=30% Similarity=0.519 Sum_probs=30.4
Q ss_pred cCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHH
Q 019504 191 INPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVL 234 (340)
Q Consensus 191 i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~ 234 (340)
...|.||||++-..|.+|||..+.....+-...+ .++|++.+.
T Consensus 155 ~lkGSSGgPvLC~~GHaVGmf~aav~trGvakai-~fvPve~l~ 197 (203)
T 3su6_A 155 YLKGSAGGPLLCPAGHAVGIFRTAVSTRGVAKAV-DFIPVESLE 197 (203)
T ss_dssp GTTTCTTCEEECTTSCEEEEEEEEEEETTEEEEE-EEEEHHHHH
T ss_pred eccCCCCCceecCCCCEEEEEEEEEEcCceeeeE-EEEEccccc
Confidence 3579999999988999999987655433322333 447887654
No 349
>1ep5_B Capsid protein C, coat protein C; beta barrel, hydrolase; 2.30A {Venezuelan equine encephalitis virus} SCOP: b.47.1.3 PDB: 1ep6_A 3j0c_C
Probab=90.18 E-value=0.45 Score=36.15 Aligned_cols=31 Identities=26% Similarity=0.517 Sum_probs=25.3
Q ss_pred EeeccCCCCccceeecCCCcEEEEEeeeeeC
Q 019504 187 TDAAINPGNSGGPLLDSKGNLIGINTAIITQ 217 (340)
Q Consensus 187 ~d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~ 217 (340)
-...-.+|+||-|++|..|+||+|+-.+...
T Consensus 99 p~G~g~~GdSGrpI~Dn~GrVVaIVlGGa~e 129 (157)
T 1ep5_B 99 PKGVGAKGDSGRPILDNQGRVVAIVLGGVNE 129 (157)
T ss_dssp ETTCCCTTCTTCEEECTTSCEEEEEEEEEEE
T ss_pred ccCCCCCCCCCCccCcCCCcEEEEEecCCCC
Confidence 3444568999999999999999998876543
No 350
>1kxf_A Sindbis virus capsid protein; chymotrypsin-like serine proteinase, wild type, viral protein; 2.38A {Sindbis virus} SCOP: b.47.1.3 PDB: 1ld4_A 3j0f_A
Probab=89.51 E-value=0.32 Score=40.79 Aligned_cols=30 Identities=23% Similarity=0.451 Sum_probs=24.8
Q ss_pred eeccCCCCccceeecCCCcEEEEEeeeeeC
Q 019504 188 DAAINPGNSGGPLLDSKGNLIGINTAIITQ 217 (340)
Q Consensus 188 d~~i~~G~SGGPl~d~~G~VVGi~~~~~~~ 217 (340)
...--+|+||-|++|..|+||+|+-.+...
T Consensus 207 ~G~G~~GDSGRpI~DN~GrVVaIVLGGane 236 (264)
T 1kxf_A 207 RGVGGRGDSGRPIMDNSGRVVAIVLGGADE 236 (264)
T ss_dssp TTSCCTTCTTCEEECTTSCEEEEEEEEEEE
T ss_pred ccCCCCCCCCCccccCCCcEEEEEecCCCc
Confidence 334568999999999999999999877653
No 351
>2o8m_A Protease; NS3, NS4A, viral protein; 2.00A {Hepatitis c virus} PDB: 3lon_A* 2a4g_A* 2a4q_A* 2fm2_A* 2obo_A* 2obq_A 2a4r_A* 2oc1_A* 2oc7_A* 2oc8_A* 3eyd_A* 3kf2_A 3kn2_A* 3knx_A* 2oc0_A* 3lox_A* 2oin_A 1rtl_A* 1rgq_A* 2f9v_A* ...
Probab=72.35 E-value=6.6 Score=32.04 Aligned_cols=44 Identities=32% Similarity=0.595 Sum_probs=31.6
Q ss_pred CCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHH
Q 019504 192 NPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKI 236 (340)
Q Consensus 192 ~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~ 236 (340)
..|.||+||+-+.|++|||.....-..+-...+-| +|.+.+..-
T Consensus 146 ykGssgaPllCe~gh~vGly~~~VC~rG~ik~~~f-~p~e~~~~~ 189 (200)
T 2o8m_A 146 LKGSAGGPLLCPAGHAVGLFRAAVCTRGVAKAVDF-IPVENLETT 189 (200)
T ss_dssp TTTCTTCEEECTTSCEEEEEEEEEEETTEEEEEEE-EEHHHHHHH
T ss_pred EeCCCCCceeccCCceeeEEEEEEecCCceeeeEe-eeccccccc
Confidence 46889999998899999997765443333345556 898776543
No 352
>1i4k_A Putative snRNP SM-like protein; core snRNP domain, RNA binding protein; HET: CIT; 2.50A {Archaeoglobus fulgidus} SCOP: b.38.1.1 PDB: 1i5l_A*
Probab=63.16 E-value=19 Score=24.41 Aligned_cols=60 Identities=23% Similarity=0.283 Sum_probs=40.1
Q ss_pred EEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecCCCCccceeecCCCCCCCCCEEEEEecCCC
Q 019504 93 RVNILASDGVQKNFEGKLVGADRAKDLAVLKIEASEDLLKPINVGQSSFLKVGQQCLAIGNPFG 156 (340)
Q Consensus 93 ~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~g 156 (340)
.+.|.+.+|+ .+.+++.++|...++.|=........-....++. -+-.|+.|..+..|.+
T Consensus 16 ~V~V~L~~g~--~~~G~L~~~D~~mNlvL~d~~e~~~~~~~~~lg~--v~iRG~~I~~i~~~d~ 75 (77)
T 1i4k_A 16 PVIVRLKGGR--EFRGTLDGYDIHMNLVLLDAEEIQNGEVVRKVGS--VVIRGDTVVFVSPAPG 75 (77)
T ss_dssp EEEEEETTSC--EEEEEEEEECTTCCEEEEEEEEEETTEEEEEEEE--EEECGGGEEEEEECC-
T ss_pred EEEEEEcCCC--EEEEEEEEEcCCCCeEEeeEEEEecCCcEeECCE--EEECCCEEEEEEeCCC
Confidence 7999999997 8999999999999999887764321112223321 1234667766665543
No 353
>1th7_A SnRNP-2, small nuclear riboprotein protein; archaea, SM protein, SM fold, SS-SM1, RNA binding protein; 1.68A {Sulfolobus solfataricus} SCOP: b.38.1.1
Probab=61.27 E-value=27 Score=23.98 Aligned_cols=57 Identities=16% Similarity=0.152 Sum_probs=38.4
Q ss_pred EEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecCCCCccceeecCCCCCCCCCEEEEEec
Q 019504 93 RVNILASDGVQKNFEGKLVGADRAKDLAVLKIEASEDLLKPINVGQSSFLKVGQQCLAIGN 153 (340)
Q Consensus 93 ~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~ 153 (340)
.+.|.+.+|+ .+.+++.++|...++.|=........-....++. -+-.|+.|..+..
T Consensus 21 ~V~V~l~~g~--~~~G~L~~~D~~mNlvL~d~~e~~~~~~~~~lg~--v~iRG~~I~~i~~ 77 (81)
T 1th7_A 21 LVLVKLKGNK--EVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGT--IVIRGDNVILISP 77 (81)
T ss_dssp EEEEEETTTE--EEEEEEEEECTTCCEEEEEEEEECSSSCEEEEEE--EEECGGGEEEEEE
T ss_pred eEEEEEcCCc--EEEEEEEEEcCCCCEEEccEEEEecCCceeECCE--EEECCCEEEEEEe
Confidence 7899999997 8999999999999999988765422112223321 1234666665543
No 354
>1d3b_B Protein (small nuclear ribonucleoprotein associat B); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_A 2y9b_A 2y9c_A 2y9d_A
Probab=58.64 E-value=17 Score=25.73 Aligned_cols=32 Identities=22% Similarity=0.379 Sum_probs=28.7
Q ss_pred EEEEEecCCceeEEEEEEEEeCCCCcEEEEEEec
Q 019504 93 RVNILASDGVQKNFEGKLVGADRAKDLAVLKIEA 126 (340)
Q Consensus 93 ~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~ 126 (340)
.+.|.+.+|+ .+.+++.++|...++.|=....
T Consensus 16 ~V~V~l~~gr--~~~G~L~~~D~~mNlvL~d~~E 47 (91)
T 1d3b_B 16 RMRCILQDGR--IFIGTFKAFDKHMNLILCDCDE 47 (91)
T ss_dssp EEEEEETTCC--EEEEEEEECCTTCCEEEEEEEE
T ss_pred cEEEEECCCe--EEEEEEEEECCCCeEEecCEEE
Confidence 7999999997 8999999999999999877654
No 355
>1h64_1 SnRNP SM-like protein; SM fold, spliceosome, snRNP core; 1.9A {Pyrococcus abyssi} SCOP: b.38.1.1 PDB: 1m8v_A*
Probab=57.39 E-value=19 Score=24.30 Aligned_cols=33 Identities=24% Similarity=0.467 Sum_probs=29.2
Q ss_pred EEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecC
Q 019504 93 RVNILASDGVQKNFEGKLVGADRAKDLAVLKIEAS 127 (340)
Q Consensus 93 ~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~ 127 (340)
.+.|.+.+|+ .+.+++.++|...++.|=.....
T Consensus 16 ~V~V~l~~g~--~~~G~L~~~D~~mNlvL~d~~e~ 48 (75)
T 1h64_1 16 DVLVILKKGF--EFRGRLIGYDIHLNVVLADAEMI 48 (75)
T ss_dssp EEEEEETTSE--EEEEEEEEECTTCCEEEEEEEEE
T ss_pred EEEEEECCCC--EEEEEEEEEeCCCCeEEeeEEEE
Confidence 7999999997 89999999999999998877543
No 356
>3s6n_G Small nuclear ribonucleoprotein G; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_G 2y9c_G 2y9d_G 3cw1_G 3pgw_G* 2y9a_G
Probab=57.07 E-value=20 Score=24.38 Aligned_cols=33 Identities=18% Similarity=0.270 Sum_probs=29.4
Q ss_pred EEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecC
Q 019504 93 RVNILASDGVQKNFEGKLVGADRAKDLAVLKIEAS 127 (340)
Q Consensus 93 ~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~ 127 (340)
.+.|.+.+|+ .+.+++.++|...++.|=.....
T Consensus 16 ~V~V~Lk~gr--~~~G~L~~~D~~mNlvL~~~~e~ 48 (76)
T 3s6n_G 16 KLSLKLNGGR--HVQGILRGFDPFMNLVIDECVEM 48 (76)
T ss_dssp EEEEEETTTE--EEEEEEEEECTTCCEEEEEEEEC
T ss_pred eEEEEECCCc--EEEEEEEEECCcceEEEeceEEE
Confidence 7999999997 89999999999999998877653
No 357
>4emk_B U6 snRNA-associated SM-like protein LSM6; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_B
Probab=53.46 E-value=23 Score=23.97 Aligned_cols=32 Identities=34% Similarity=0.445 Sum_probs=28.2
Q ss_pred EEEEEecCCceeEEEEEEEEeCCCCcEEEEEEec
Q 019504 93 RVNILASDGVQKNFEGKLVGADRAKDLAVLKIEA 126 (340)
Q Consensus 93 ~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~ 126 (340)
.+.|.+.+|+ .+.+++.++|...++.|=....
T Consensus 16 ~V~V~Lk~g~--~~~G~L~~~D~~mNlvL~d~~e 47 (75)
T 4emk_B 16 KVLIRLSSGV--DYKGILSCLDGYMNLALERTEE 47 (75)
T ss_dssp EEEEECTTSC--EEEEEEEEECTTCEEEEEEEEE
T ss_pred eEEEEEcCCc--EEEEEEEEEcCcceEEEccEEE
Confidence 7999999997 8999999999999998876643
No 358
>1mgq_A SM-like protein; LSM, RNA-binding, archea, RNA binding protein; 1.70A {Methanothermobacterthermautotrophicus} SCOP: b.38.1.1 PDB: 1i81_A 1loj_A* 1jbm_A 1jri_A
Probab=53.44 E-value=24 Score=24.43 Aligned_cols=33 Identities=24% Similarity=0.193 Sum_probs=29.1
Q ss_pred EEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecC
Q 019504 93 RVNILASDGVQKNFEGKLVGADRAKDLAVLKIEAS 127 (340)
Q Consensus 93 ~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~ 127 (340)
.+.|.+.+|+ .+.+++.++|...++.|=.....
T Consensus 27 ~V~V~Lk~g~--~~~G~L~~~D~~mNlvL~d~~e~ 59 (83)
T 1mgq_A 27 PVIIKLKGDR--EFRGVLKSFDLHMNLVLNDAEEL 59 (83)
T ss_dssp EEEEEETTTE--EEEEEEEEECTTCCEEEEEEEEE
T ss_pred EEEEEEcCCc--EEEEEEEEECCCceeEEccEEEE
Confidence 7999999997 89999999999999998877543
No 359
>1b34_A Protein (small nuclear ribonucleoprotein SM D1); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_B 2y9b_B 2y9c_B 2y9d_B 3cw1_B 3pgw_X* 3s6n_A
Probab=53.32 E-value=55 Score=24.41 Aligned_cols=60 Identities=15% Similarity=0.215 Sum_probs=42.5
Q ss_pred EEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecCCCCccceeecCCCCCCCCCEEEEEecCCC
Q 019504 93 RVNILASDGVQKNFEGKLVGADRAKDLAVLKIEASEDLLKPINVGQSSFLKVGQQCLAIGNPFG 156 (340)
Q Consensus 93 ~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~g 156 (340)
.|.|.+.+|. .+.+++..+|...++.|=.+......-....++. -+-.|+.|..+..|..
T Consensus 14 ~V~V~Lk~g~--~~~G~L~~~D~~MNlvL~d~~e~~~~~~~~~lg~--v~IRG~nI~~I~~pd~ 73 (119)
T 1b34_A 14 TVTIELKNGT--QVHGTITGVDVSMNTHLKAVKMTLKNREPVQLET--LSIRGNNIRYFILPDS 73 (119)
T ss_dssp EEEEEETTCC--EEEEEEEEECTTCCEEEEEEEEECTTSCCEEEEE--EEECGGGEEEEECCTT
T ss_pred EEEEEEcCCC--EEEEEEEEEcccceEEeccEEEecCCCceeEcce--EEEcCCeEEEEEeccc
Confidence 7899999997 8999999999999999887765322112334421 2335777877776655
No 360
>4emk_C U6 snRNA-associated SM-like protein LSM7; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_C
Probab=51.97 E-value=26 Score=26.02 Aligned_cols=32 Identities=25% Similarity=0.396 Sum_probs=28.7
Q ss_pred EEEEEecCCceeEEEEEEEEeCCCCcEEEEEEec
Q 019504 93 RVNILASDGVQKNFEGKLVGADRAKDLAVLKIEA 126 (340)
Q Consensus 93 ~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~ 126 (340)
.+.|.+.+|+ .+.+++.++|.+.+|.|=....
T Consensus 35 ~V~V~L~dGr--~~~G~L~~fD~~mNLVL~d~~E 66 (113)
T 4emk_C 35 RIQATFTGGR--QITGILKGFDQLMNLVLDDVEE 66 (113)
T ss_dssp EEEEEETTSC--EEEEEEEEECTTCCEEEEEEEE
T ss_pred cEEEEEeCCe--EEEEEEEEEcCcccEEEeeEEE
Confidence 7999999997 8999999999999999877654
No 361
>4emk_A U6 snRNA-associated SM-like protein LSM5; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_A
Probab=51.47 E-value=26 Score=25.07 Aligned_cols=32 Identities=19% Similarity=0.383 Sum_probs=28.3
Q ss_pred EEEEEecCCceeEEEEEEEEeCCCCcEEEEEEec
Q 019504 93 RVNILASDGVQKNFEGKLVGADRAKDLAVLKIEA 126 (340)
Q Consensus 93 ~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~ 126 (340)
.+.|.+.+|+ .+.+++.++|...++.|=....
T Consensus 32 ~V~V~Lk~gr--~~~G~L~gfD~~mNlvL~d~~E 63 (94)
T 4emk_A 32 NLWVIMKSER--EFAGTLVGFDDYVNIVLKDVTE 63 (94)
T ss_dssp EEEEEESSSE--EEEEEEEEECTTCCEEEEEEEE
T ss_pred eEEEEECCCc--EEEEEEEEEcccCCeEeeeEEE
Confidence 7999999997 8999999999999999876654
No 362
>1d3b_A Protein (small nuclear ribonucleoprotein SM D3); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1
Probab=51.41 E-value=31 Score=23.35 Aligned_cols=33 Identities=21% Similarity=0.331 Sum_probs=29.4
Q ss_pred EEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecC
Q 019504 93 RVNILASDGVQKNFEGKLVGADRAKDLAVLKIEAS 127 (340)
Q Consensus 93 ~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~ 127 (340)
.+.|.+.+|. .+.+++..+|...++.|=.+...
T Consensus 17 ~V~VeLk~g~--~~~G~L~~~D~~MNl~L~~~~e~ 49 (75)
T 1d3b_A 17 IVTCETNTGE--VYRGKLIEAEDNMNCQMSNITVT 49 (75)
T ss_dssp EEEEEETTSC--EEEEEEEEECTTCCEEEEEEEEE
T ss_pred EEEEEECCCc--EEEEEEEEEccceeEEEEeEEEE
Confidence 7899999997 89999999999999998877653
No 363
>4emg_A Probable U6 snRNA-associated SM-like protein LSM3; SM fold, mRNA decay, LSM proteins, RNA binding protein; 2.70A {Schizosaccharomyces pombe}
Probab=51.25 E-value=26 Score=24.90 Aligned_cols=32 Identities=16% Similarity=0.198 Sum_probs=28.5
Q ss_pred EEEEEecCCceeEEEEEEEEeCCCCcEEEEEEec
Q 019504 93 RVNILASDGVQKNFEGKLVGADRAKDLAVLKIEA 126 (340)
Q Consensus 93 ~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~ 126 (340)
.+.|.+.+|+ .+.+++.++|.+.++.|=....
T Consensus 21 ~V~V~l~~gr--~~~G~L~~~D~~mNlvL~d~~E 52 (93)
T 4emg_A 21 IVYVKLRGDR--ELNGRLHAYDEHLNMVLGDAEE 52 (93)
T ss_dssp EEEEEETTTE--EEEEEEEEECTTCCEEEEEEEE
T ss_pred EEEEEECCCc--EEEEEEEEECCcccEEeecEEE
Confidence 7999999996 8999999999999999877654
No 364
>1ljo_A Archaeal SM-like protein AF-SM2; snRNP, core snRNP domain, RNA binding protein, unknown F; 1.95A {Archaeoglobus fulgidus} SCOP: b.38.1.1
Probab=51.20 E-value=32 Score=23.35 Aligned_cols=32 Identities=19% Similarity=0.215 Sum_probs=28.6
Q ss_pred EEEEEecCC-ceeEEEEEEEEeCCCCcEEEEEEec
Q 019504 93 RVNILASDG-VQKNFEGKLVGADRAKDLAVLKIEA 126 (340)
Q Consensus 93 ~i~v~~~~g-~~~~~~a~v~~~d~~~DlAlL~v~~ 126 (340)
.+.|.+.+| + .+.+++.++|...++.|=....
T Consensus 17 ~v~V~lk~g~~--~~~G~L~~~D~~mNlvL~d~~e 49 (77)
T 1ljo_A 17 IIRVEMKGEEN--QLVGKLEGVDDYMNLYLTNAME 49 (77)
T ss_dssp EEEEEETTCSS--EEEEEEEEECTTCCEEEEEEEE
T ss_pred EEEEEEeCCCE--EEEEEEEEECCcceEEEeeEEE
Confidence 788999999 7 8999999999999999887754
No 365
>3s6n_F Small nuclear ribonucleoprotein F; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_F 2y9c_F 2y9d_F 3cw1_F 3pgw_F* 2y9a_F
Probab=51.07 E-value=30 Score=24.18 Aligned_cols=59 Identities=20% Similarity=0.166 Sum_probs=39.9
Q ss_pred EEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecCCCCccceeecCCCCCCCCCEEEEEecCC
Q 019504 93 RVNILASDGVQKNFEGKLVGADRAKDLAVLKIEASEDLLKPINVGQSSFLKVGQQCLAIGNPF 155 (340)
Q Consensus 93 ~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~ 155 (340)
.+.|.+.+|+ .+.+++.++|...++.|=........-....++ .-+-.|+.|..++-|.
T Consensus 18 ~V~V~Lk~g~--~~~G~L~~~D~~mNlvL~d~~e~~~g~~~~~lg--~v~IRG~nI~~i~~~d 76 (86)
T 3s6n_F 18 PVMVKLKWGM--EYKGYLVSVDGYMNMQLANTEEYIDGALSGHLG--EVLIRCNNVLYIRGVE 76 (86)
T ss_dssp EEEEEETTSC--EEEEEEEEECTTCCEEEEEEEEEETTEEEEEES--SEEECGGGEEEEEECC
T ss_pred eEEEEEcCCe--EEEEEEEEEcCceEEEEeeEEEEcCCceeeEcc--EEEEeCCeEEEEEeCC
Confidence 7999999997 899999999999999987776321111223332 1223467777766553
No 366
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=50.19 E-value=10 Score=29.84 Aligned_cols=21 Identities=33% Similarity=0.574 Sum_probs=18.9
Q ss_pred CCCccceeecCCCcEEEEEee
Q 019504 193 PGNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 193 ~G~SGGPl~d~~G~VVGi~~~ 213 (340)
.+.++-|++|.+|+++|+++.
T Consensus 47 ~~~~~~pVvd~~g~lvGiit~ 67 (170)
T 4esy_A 47 HQIGCAPVVDQNGHLVGIITE 67 (170)
T ss_dssp TTCSEEEEECTTSCEEEEEEG
T ss_pred cCCeEEEEEcCCccEEEEEEH
Confidence 678899999999999999874
No 367
>3bw1_A SMX4 protein, U6 snRNA-associated SM-like protein LSM3; RNA-binding protein, SM protein, ring, HOMO octamer, mRNA processing; 2.50A {Saccharomyces cerevisiae}
Probab=49.75 E-value=24 Score=25.30 Aligned_cols=32 Identities=19% Similarity=0.182 Sum_probs=28.6
Q ss_pred EEEEEecCCceeEEEEEEEEeCCCCcEEEEEEec
Q 019504 93 RVNILASDGVQKNFEGKLVGADRAKDLAVLKIEA 126 (340)
Q Consensus 93 ~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~ 126 (340)
++.|.+.+|+ .+.+++.++|+..++.|=....
T Consensus 22 ~V~V~Lk~gr--~~~G~L~~fD~~mNlVL~d~~E 53 (96)
T 3bw1_A 22 RVYIKLRGAR--TLVGTLQAFDSHCNIVLSDAVE 53 (96)
T ss_dssp EEEEEEGGGC--EEEEEEEEECTTCCEEEEEEEE
T ss_pred eEEEEECCCc--EEEEEEEEECCCCcEEEcCEEE
Confidence 7999999997 8999999999999999877653
No 368
>1i8f_A Putative snRNP SM-like protein; beta barrel-like SMAP monomers form 35-stranded beta-sheet I heptamer, structural genomics; 1.75A {Pyrobaculum aerophilum} SCOP: b.38.1.1 PDB: 1lnx_A*
Probab=49.72 E-value=23 Score=24.42 Aligned_cols=32 Identities=22% Similarity=0.236 Sum_probs=28.5
Q ss_pred EEEEEecCCceeEEEEEEEEeCCCCcEEEEEEec
Q 019504 93 RVNILASDGVQKNFEGKLVGADRAKDLAVLKIEA 126 (340)
Q Consensus 93 ~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~ 126 (340)
.+.|.+.+|+ .+.+++.++|...++.|=....
T Consensus 23 ~V~V~l~~g~--~~~G~L~~~D~~mNlvL~d~~e 54 (81)
T 1i8f_A 23 QVLVKLRDSH--EIRGILRSFDQHVNLLLEDAEE 54 (81)
T ss_dssp EEEEEEGGGE--EEEEEEEEECTTCCEEEEEEEE
T ss_pred eEEEEEcCCc--EEEEEEEEEcCCCeeEEccEEE
Confidence 7899999996 8999999999999999877654
No 369
>1b34_B Protein (small nuclear ribonucleoprotein SM D2); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_C 2y9b_C 2y9c_C 2y9d_C 3cw1_C 3pgw_Y* 3s6n_B
Probab=49.36 E-value=29 Score=25.88 Aligned_cols=33 Identities=15% Similarity=0.257 Sum_probs=29.3
Q ss_pred EEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecC
Q 019504 93 RVNILASDGVQKNFEGKLVGADRAKDLAVLKIEAS 127 (340)
Q Consensus 93 ~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~ 127 (340)
.+.|.+.+|+ .+.+++.++|.+.++.|=.....
T Consensus 41 ~V~V~Lk~gr--~~~G~L~~fD~~mNlvL~d~~E~ 73 (118)
T 1b34_B 41 QVLINCRNNK--KLLGRVKAFDRHCNMVLENVKEM 73 (118)
T ss_dssp EEEEEETTSC--EEEEEEEEECTTCCEEEEEEEEC
T ss_pred EEEEEECCCc--EEEEEEEEeCCceEEEEeCEEEE
Confidence 7999999997 79999999999999999877643
No 370
>1y96_A Gemin6, SIP2, GEM-associated protein 6; SM fold, protein complex, RNA binding protein; 2.00A {Homo sapiens}
Probab=43.56 E-value=68 Score=22.49 Aligned_cols=31 Identities=16% Similarity=0.371 Sum_probs=27.0
Q ss_pred EEEEEecCCceeEEEEEEEEeC-CCCcEEEEEEe
Q 019504 93 RVNILASDGVQKNFEGKLVGAD-RAKDLAVLKIE 125 (340)
Q Consensus 93 ~i~v~~~~g~~~~~~a~v~~~d-~~~DlAlL~v~ 125 (340)
++.|++.||+ .+.+.+..+| ....+.|+...
T Consensus 19 eV~V~l~dg~--~y~G~l~tvDp~s~sIvL~n~~ 50 (86)
T 1y96_A 19 EVRVTASEKN--EYKGWVLTTDPVSANIVLVNFL 50 (86)
T ss_dssp EEEEEETTTE--EEEEEEEEECTTTCCEEEEEEC
T ss_pred EEEEEEcCCC--EEEEEEEEECCCceEEEEeecc
Confidence 7999999997 8999999999 45689888873
No 371
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=43.12 E-value=24 Score=26.94 Aligned_cols=29 Identities=21% Similarity=0.365 Sum_probs=21.2
Q ss_pred ceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHH
Q 019504 198 GPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQ 239 (340)
Q Consensus 198 GPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~ 239 (340)
.|+.|.+|++||+++. .++.+.+...+.+
T Consensus 111 ~PV~~~~g~viGvv~v-------------g~~~~~~~~~~~~ 139 (142)
T 3by8_A 111 TPIYDENHKQIGVVAI-------------GLELSRVTQQIND 139 (142)
T ss_dssp EEEECTTSCEEEEEEE-------------EEEHHHHHHHHHC
T ss_pred EeEEcCCCCEEEEEEE-------------eEEHHHHHHHHHH
Confidence 5888878999999765 4666666665543
No 372
>4emh_A Probable U6 snRNA-associated SM-like protein LSM4; SM fold, mRNA decay, PRE-mRNA splicing, LSM proteins, RNA BI protein; 2.20A {Schizosaccharomyces pombe}
Probab=42.43 E-value=46 Score=24.27 Aligned_cols=60 Identities=15% Similarity=0.118 Sum_probs=39.0
Q ss_pred EEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecCC-CCccceeecCCCCCCCCCEEEEEecCCC
Q 019504 93 RVNILASDGVQKNFEGKLVGADRAKDLAVLKIEASE-DLLKPINVGQSSFLKVGQQCLAIGNPFG 156 (340)
Q Consensus 93 ~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~-~~~~~~~l~~~~~~~~G~~v~~iG~p~g 156 (340)
.+.|.+.+|+ .+.+++..+|...++.|=.+.... ..-....++ .-+-.|+.|..+..|..
T Consensus 28 ~V~V~Lk~G~--~~~G~L~~~D~~MNlvL~d~~e~~~dg~~~~~lg--~v~IRG~nI~~I~~pd~ 88 (105)
T 4emh_A 28 PILVELKNGE--TFNGHLENCDNYMNLTLREVIRTMPDGDKFFRLP--ECYIRGNNIKYLRIQDE 88 (105)
T ss_dssp EEEEEETTSC--EEEEEEEEECTTCCEEEEEEEEECTTSCEEEEEE--EEEECGGGEEEEEC---
T ss_pred EEEEEECCCC--EEEEEEEEEcCCceEEEEEEEEEccCCceeeEcC--eEEEeCCeEEEEecCHH
Confidence 7899999997 899999999999999988776421 111222332 12234677777766543
No 373
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=42.23 E-value=16 Score=28.40 Aligned_cols=22 Identities=9% Similarity=0.176 Sum_probs=18.5
Q ss_pred CCCCccceeecCCCcEEEEEee
Q 019504 192 NPGNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 192 ~~G~SGGPl~d~~G~VVGi~~~ 213 (340)
..|.|+=|++|.+|+++|+.+.
T Consensus 45 ~~~~s~~pVvd~~~~lvGiit~ 66 (156)
T 3k6e_A 45 QMTYTRVPVVTDEKQFVGTIGL 66 (156)
T ss_dssp TSSSSEEEEECC-CBEEEEEEH
T ss_pred HcCCcEEEEEcCCCcEEEEEEe
Confidence 4789999999999999999764
No 374
>3pgw_B SM B; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_A
Probab=41.94 E-value=29 Score=29.22 Aligned_cols=32 Identities=22% Similarity=0.379 Sum_probs=28.1
Q ss_pred EEEEEecCCceeEEEEEEEEeCCCCcEEEEEEec
Q 019504 93 RVNILASDGVQKNFEGKLVGADRAKDLAVLKIEA 126 (340)
Q Consensus 93 ~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~ 126 (340)
++.|++.||+ .+.+++..+|.+.+|.|=....
T Consensus 16 rV~V~LkdGR--el~GtLkgFDq~MNLVL~Da~E 47 (231)
T 3pgw_B 16 RMRCILQDGR--IFIGTFKAFDKHMNLILCDCDE 47 (231)
T ss_pred eEEEEECCCc--EEEEEEEEEcccccEEecCEEE
Confidence 7999999997 8999999999999998866544
No 375
>1n9r_A SMF, small nuclear ribonucleoprotein F, snRNP-F, SM protein F; heptamer, translation; 2.80A {Saccharomyces cerevisiae} SCOP: b.38.1.1 PDB: 1n9s_A
Probab=40.75 E-value=42 Score=23.83 Aligned_cols=32 Identities=25% Similarity=0.357 Sum_probs=28.6
Q ss_pred EEEEEecCC-ceeEEEEEEEEeCCCCcEEEEEEec
Q 019504 93 RVNILASDG-VQKNFEGKLVGADRAKDLAVLKIEA 126 (340)
Q Consensus 93 ~i~v~~~~g-~~~~~~a~v~~~d~~~DlAlL~v~~ 126 (340)
.+.|.+.+| + .+.+++.++|...++.|=....
T Consensus 33 ~V~V~Lk~g~~--~~~G~L~~~D~~MNlvL~d~~E 65 (93)
T 1n9r_A 33 RVGVKLKFNST--EYRGTLVSTDNYFNLQLNEAEE 65 (93)
T ss_dssp EEEEEESSTTE--EEEEEEEECCTTTCEEEEEEEE
T ss_pred EEEEEEcCCCE--EEEEEEEEEccccEEEEeeEEE
Confidence 799999999 6 8999999999999999877754
No 376
>3d3r_A Hydrogenase assembly chaperone HYPC/HUPF; small beta-barrel, structural genomics, PSI-2, protein struc initiative; 1.85A {Shewanella oneidensis} SCOP: b.40.14.1
Probab=38.32 E-value=52 Score=23.94 Aligned_cols=45 Identities=16% Similarity=0.262 Sum_probs=29.8
Q ss_pred EEEEEEEeCCCCcEEEEEEecCCCCccceeecCCC-CCCCCCEEEE-Eec
Q 019504 106 FEGKLVGADRAKDLAVLKIEASEDLLKPINVGQSS-FLKVGQQCLA-IGN 153 (340)
Q Consensus 106 ~~a~v~~~d~~~DlAlL~v~~~~~~~~~~~l~~~~-~~~~G~~v~~-iG~ 153 (340)
++++++..+...++|++.+.... ..+.+.--. .+++||+|++ +||
T Consensus 26 IP~kVveI~~~~~~A~Vd~~Gv~---reV~l~Lv~e~~~vGDyVLVHvGf 72 (103)
T 3d3r_A 26 IPSQVVAVDNERQSVTVDTLGVR---RDVSSHLMTEPLAIGDYVLIHIGF 72 (103)
T ss_dssp CCEEEEEEETTTTEEEEEETTEE---EEEECTTBSSCCCTTCEEEEEEEE
T ss_pred cCEEEEEEeCCCCEEEEEcCCEE---EEEEEEeecCCCCCCCEEEEeech
Confidence 58889888755579999886532 233332222 4688999987 554
No 377
>1z8r_A Coxsackievirus B4 polyprotein; beta barrel coordinated zinc ION, hydrolase; NMR {Human coxsackievirus B4}
Probab=38.07 E-value=59 Score=25.68 Aligned_cols=31 Identities=26% Similarity=0.377 Sum_probs=24.4
Q ss_pred ceEEEeeccCCCCccceeecCCCcEEEEEeee
Q 019504 183 GGIQTDAAINPGNSGGPLLDSKGNLIGINTAI 214 (340)
Q Consensus 183 ~~i~~d~~i~~G~SGGPl~d~~G~VVGi~~~~ 214 (340)
+++.-..+..||+=||.|. +..-||||++++
T Consensus 113 ~vl~~~G~~epGDCGG~L~-C~HGviGivTaG 143 (166)
T 1z8r_A 113 HVLLATGFSEPGDAGGILR-CEHGVIGLVTMG 143 (166)
T ss_dssp SEEEEECSSSCCCCBSEEE-CSSSEEEEEEEE
T ss_pred cEEEEecCCCCCCCCceee-eCCCceEEEecC
Confidence 3455556778999999998 567799999985
No 378
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=36.71 E-value=19 Score=27.96 Aligned_cols=16 Identities=38% Similarity=0.571 Sum_probs=14.1
Q ss_pred ceeecCCCcEEEEEee
Q 019504 198 GPLLDSKGNLIGINTA 213 (340)
Q Consensus 198 GPl~d~~G~VVGi~~~ 213 (340)
-|++|.+|+++||++.
T Consensus 118 lpVVd~~g~l~GiiT~ 133 (156)
T 3k6e_A 118 LPVVDAEGIFQGIITR 133 (156)
T ss_dssp EEEECTTSBEEEEEEH
T ss_pred eEEEecCCEEEEEEEH
Confidence 6999999999999764
No 379
>2fwk_A U6 snRNA-associated SM-like protein LSM5; structural genomics, structural genomics consortium, SGC, DNA binding protein; 2.14A {Cryptosporidium parvum} SCOP: b.38.1.1 PDB: 3pgg_A
Probab=36.24 E-value=28 Score=26.14 Aligned_cols=31 Identities=19% Similarity=0.409 Sum_probs=27.1
Q ss_pred EEEEEecCCceeEEEEEEEEeCCCCcEEEEEEe
Q 019504 93 RVNILASDGVQKNFEGKLVGADRAKDLAVLKIE 125 (340)
Q Consensus 93 ~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~ 125 (340)
.+.|.+.+|+ .+.+++.++|.+.++.|=...
T Consensus 40 ~V~V~Lk~Gr--~~~G~L~~fD~~mNlVL~d~~ 70 (121)
T 2fwk_A 40 RIYVVMKGDK--EFSGVLRGFDEYVNMVLDDVQ 70 (121)
T ss_dssp BCEEEETTTE--EECCEEEEECTTCCEEEESCC
T ss_pred eEEEEECCCc--EEEEEEEEEcccCCeEeceEE
Confidence 6899999997 899999999999999876553
No 380
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=35.83 E-value=20 Score=26.29 Aligned_cols=21 Identities=19% Similarity=0.219 Sum_probs=17.1
Q ss_pred CCCccceeecCCCcEEEEEee
Q 019504 193 PGNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 193 ~G~SGGPl~d~~G~VVGi~~~ 213 (340)
.+..--|++|.+|+++||++.
T Consensus 97 ~~~~~lpVvd~~g~~~Giit~ 117 (127)
T 3nqr_A 97 QRYHMAIVIDEFGGVSGLVTI 117 (127)
T ss_dssp TTCCEEEEECTTSCEEEEEEH
T ss_pred cCCeEEEEEeCCCCEEEEEEH
Confidence 355568999999999999774
No 381
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=34.69 E-value=22 Score=26.60 Aligned_cols=20 Identities=25% Similarity=0.350 Sum_probs=16.6
Q ss_pred CCccceeecCCCcEEEEEee
Q 019504 194 GNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 194 G~SGGPl~d~~G~VVGi~~~ 213 (340)
+..--|++|.+|+++||++.
T Consensus 99 ~~~~~~Vvd~~g~lvGiit~ 118 (136)
T 3lfr_A 99 HNHMAIVIDEYGGVAGLVTI 118 (136)
T ss_dssp TCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEEEH
Confidence 44568999999999999875
No 382
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=33.95 E-value=23 Score=26.26 Aligned_cols=20 Identities=25% Similarity=0.446 Sum_probs=16.3
Q ss_pred CCccceeecCCCcEEEEEee
Q 019504 194 GNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 194 G~SGGPl~d~~G~VVGi~~~ 213 (340)
+..--|++|.+|+++||.+.
T Consensus 99 ~~~~~~Vvd~~g~lvGiit~ 118 (130)
T 3hf7_A 99 KKKVGLVVDEYGDIQGLVTV 118 (130)
T ss_dssp CCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEcCCCCEEEEeeH
Confidence 44568999999999999774
No 383
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=33.70 E-value=23 Score=25.95 Aligned_cols=20 Identities=30% Similarity=0.353 Sum_probs=16.1
Q ss_pred CCccceeecCCCcEEEEEee
Q 019504 194 GNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 194 G~SGGPl~d~~G~VVGi~~~ 213 (340)
+...=|++|.+|+++|+.+.
T Consensus 98 ~~~~lpVvd~~g~~~Giit~ 117 (128)
T 3gby_A 98 KCSVVPLADEDGRYEGVVSR 117 (128)
T ss_dssp SSSEEEEECTTCBEEEEEEH
T ss_pred CCcEEEEECCCCCEEEEEEH
Confidence 44457999999999999764
No 384
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=33.55 E-value=57 Score=25.13 Aligned_cols=30 Identities=40% Similarity=0.586 Sum_probs=23.6
Q ss_pred eEEEeeccCCCCccceeecCCCcEEEEEeee
Q 019504 184 GIQTDAAINPGNSGGPLLDSKGNLIGINTAI 214 (340)
Q Consensus 184 ~i~~d~~i~~G~SGGPl~d~~G~VVGi~~~~ 214 (340)
++.-..+..||+=||.|. ...-||||++++
T Consensus 94 ~l~g~G~~epGDCGG~L~-C~HGviGivTaG 123 (142)
T 2hrv_A 94 LLIGEGPCEPGDCGGKLL-CKHGVIGIVTAG 123 (142)
T ss_dssp EEEEECCCCTTCTTCEEE-ETTEEEEEEEEE
T ss_pred EEEEEcCCCCCCCCceee-eCCCceEEEecC
Confidence 344455678999999998 567799999985
No 385
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=33.53 E-value=23 Score=26.08 Aligned_cols=20 Identities=20% Similarity=0.278 Sum_probs=16.4
Q ss_pred CCccceeecCCCcEEEEEee
Q 019504 194 GNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 194 G~SGGPl~d~~G~VVGi~~~ 213 (340)
+..--|++|.+|+++|+++.
T Consensus 101 ~~~~~~Vvd~~g~~vGivt~ 120 (130)
T 3i8n_A 101 RLQLALVVDEYGTVLGLVTL 120 (130)
T ss_dssp TCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEcCCCCEEEEEEH
Confidence 45567999999999999764
No 386
>2y9a_D Small nuclear ribonucleoprotein SM D3; splicing-RNA complex, PRE-mRNA splicing, spliceosome, snRNP biogenesis, SM site, SM fold, heteromeric heptameric ring; 3.60A {Homo sapiens} PDB: 2y9b_D 2y9c_D 2y9d_D 3pgw_Z* 3cw1_D
Probab=33.23 E-value=1.5e+02 Score=22.21 Aligned_cols=60 Identities=17% Similarity=0.109 Sum_probs=40.6
Q ss_pred EEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecCCCCccceeecCCCCCCCCCEEEEEecCCC
Q 019504 93 RVNILASDGVQKNFEGKLVGADRAKDLAVLKIEASEDLLKPINVGQSSFLKVGQQCLAIGNPFG 156 (340)
Q Consensus 93 ~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~g 156 (340)
.|.|.+.+|. .+.+++..+|...++.|=.+......-....++. -+-.|..|..+-.|..
T Consensus 17 ~V~VeLknG~--~~~G~L~~~D~~MNi~L~dv~e~~~~g~~~~l~~--v~IRGnnI~~I~lpd~ 76 (126)
T 2y9a_D 17 IVTCETNTGE--VYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQ--VYIRGSKIRFLILPDM 76 (126)
T ss_dssp EEEEEESSCC--EEEEEEEEECTTSCEEEEEEEEECTTSCCEEEEE--EEECGGGEEEEECCSS
T ss_pred EEEEEECCCc--EEEEEEEEEcCceEEEEeeEEEEcCCCcEeeccc--EEEeCCEEEEEEcccc
Confidence 7899999997 8999999999999999988864321112233321 1234666666665544
No 387
>1m5q_A SMAP3, small nuclear ribonucleoprotein homolog, SM-like P; OB-like fold, B-sheet toroid, 14-MER, cadmium-binding site, translation; 2.00A {Pyrobaculum aerophilum} SCOP: b.38.1.1
Probab=32.89 E-value=75 Score=24.13 Aligned_cols=56 Identities=13% Similarity=0.210 Sum_probs=39.6
Q ss_pred EEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecCCCCccceeecCCCCCCCCCEEEEEecCCC
Q 019504 93 RVNILASDGVQKNFEGKLVGADRAKDLAVLKIEASEDLLKPINVGQSSFLKVGQQCLAIGNPFG 156 (340)
Q Consensus 93 ~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~~~~~~~~l~~~~~~~~G~~v~~iG~p~g 156 (340)
.+.|.+.+|. .+.+++.++|...++.|=....... -.++. -+-.|+.|..+.-|..
T Consensus 12 ~V~V~Lk~G~--~~~G~L~~~D~~MNlvL~d~~E~~~----~~lg~--v~IRG~nI~~I~~~d~ 67 (130)
T 1m5q_A 12 EVQVVLSNGE--VYKGVLHAVDNQLNIVLANASNKAG----EKFNR--VFIMYRYIVHIDSTER 67 (130)
T ss_dssp EEEEEETTSC--EEEEEEEEECTTCCEEEEEEECTTC----CEEEE--EEECGGGEEEEEECCC
T ss_pred eEEEEECCCc--EEEEEEEEEcccceeEEeeEEEEcC----CEece--EEEeCCeEEEEEcCCc
Confidence 7899999997 8999999999999999888765421 12321 1234666666665533
No 388
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=32.58 E-value=23 Score=26.08 Aligned_cols=21 Identities=24% Similarity=0.376 Sum_probs=15.9
Q ss_pred CCCccceeecCCCcEEEEEee
Q 019504 193 PGNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 193 ~G~SGGPl~d~~G~VVGi~~~ 213 (340)
.+..--|++|.+|+++||++.
T Consensus 97 ~~~~~~pVvd~~g~~~Giit~ 117 (129)
T 3jtf_A 97 SRNHLAIVIDEHGGISGLVTM 117 (129)
T ss_dssp SSCCEEEEECC-CCEEEEEEH
T ss_pred cCCeEEEEEeCCCCEEEEEEH
Confidence 355567999989999999764
No 389
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=30.00 E-value=30 Score=24.92 Aligned_cols=21 Identities=33% Similarity=0.485 Sum_probs=16.8
Q ss_pred CCCccceeecCCCcEEEEEee
Q 019504 193 PGNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 193 ~G~SGGPl~d~~G~VVGi~~~ 213 (340)
.+.+--|++|.+|+++|+++.
T Consensus 91 ~~~~~l~Vvd~~g~~~Givt~ 111 (122)
T 3kpb_A 91 YNISGVPVVDDYRRVVGIVTS 111 (122)
T ss_dssp HTCSEEEEECTTCBEEEEEEH
T ss_pred hCCCeEEEECCCCCEEEEEeH
Confidence 355667999988999999764
No 390
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=29.92 E-value=28 Score=26.68 Aligned_cols=21 Identities=24% Similarity=0.248 Sum_probs=17.0
Q ss_pred CCCccceeecCCCcEEEEEee
Q 019504 193 PGNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 193 ~G~SGGPl~d~~G~VVGi~~~ 213 (340)
.+..--|++|.+|+++||++.
T Consensus 131 ~~~~~~~Vvd~~g~~~Givt~ 151 (156)
T 3oi8_A 131 QRNHMAIVIDEYGGTSGLVTF 151 (156)
T ss_dssp TTCCEEEEECTTSSEEEEEEH
T ss_pred cCCeEEEEECCCCCEEEEEEH
Confidence 355567999999999999874
No 391
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=29.88 E-value=29 Score=26.21 Aligned_cols=20 Identities=20% Similarity=0.154 Sum_probs=16.5
Q ss_pred CCccceeecCCCcEEEEEee
Q 019504 194 GNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 194 G~SGGPl~d~~G~VVGi~~~ 213 (340)
+..--|++|.+|+++||++.
T Consensus 117 ~~~~l~Vvd~~g~~~Giit~ 136 (148)
T 3lv9_A 117 KLQLAIVVDEYGGTSGVVTI 136 (148)
T ss_dssp TCSEEEEECTTSSEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEEEH
Confidence 55567999999999999764
No 392
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=29.38 E-value=27 Score=26.66 Aligned_cols=21 Identities=24% Similarity=0.189 Sum_probs=16.9
Q ss_pred CCCccceeecCCCcEEEEEee
Q 019504 193 PGNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 193 ~G~SGGPl~d~~G~VVGi~~~ 213 (340)
.+..--|++|.+|+++||++.
T Consensus 114 ~~~~~lpVvd~~g~~vGivt~ 134 (153)
T 3oco_A 114 HRVPMAIVIDEYGGTSGIITD 134 (153)
T ss_dssp TTCSCEEEECTTSCEEEEECH
T ss_pred cCCcEEEEEeCCCCEEEEeeH
Confidence 355567999999999999764
No 393
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=29.06 E-value=39 Score=25.19 Aligned_cols=19 Identities=37% Similarity=0.625 Sum_probs=15.4
Q ss_pred ceeecCCCcEEEEEeeeee
Q 019504 198 GPLLDSKGNLIGINTAIIT 216 (340)
Q Consensus 198 GPl~d~~G~VVGi~~~~~~ 216 (340)
.|+++.+|++||+++..+.
T Consensus 106 ~PV~~~~g~viGvv~vg~~ 124 (131)
T 1p0z_A 106 SPIQDATGKVIGIVSVGYT 124 (131)
T ss_dssp EEEECTTCCEEEEEEEEEE
T ss_pred EeEECCCCCEEEEEEEEEE
Confidence 5898888999999886543
No 394
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=28.64 E-value=36 Score=22.49 Aligned_cols=20 Identities=10% Similarity=0.335 Sum_probs=15.2
Q ss_pred CCCccceeecCCCcEEEEEee
Q 019504 193 PGNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 193 ~G~SGGPl~d~~G~VVGi~~~ 213 (340)
.+.++=|++| +|+++||.+.
T Consensus 21 ~~i~~~~V~d-~~~lvGIvT~ 40 (70)
T 3ghd_A 21 NKAGSAVVME-GDEILGVVTE 40 (70)
T ss_dssp TTCSEEEEEE-TTEEEEEEEH
T ss_pred cCCCEEEEEE-CCEEEEEEEH
Confidence 4556677776 7999999874
No 395
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=28.63 E-value=1.3e+02 Score=19.89 Aligned_cols=33 Identities=24% Similarity=0.227 Sum_probs=30.0
Q ss_pred EEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecC
Q 019504 93 RVNILASDGVQKNFEGKLVGADRAKDLAVLKIEAS 127 (340)
Q Consensus 93 ~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~ 127 (340)
.+..+..||. .|+|++...+....-+++++...
T Consensus 19 dVLA~wtDGl--~Y~gtI~~V~~~~gtC~V~F~D~ 51 (66)
T 2eqj_A 19 DVLARWSDGL--FYLGTIKKINILKQSCFIIFEDS 51 (66)
T ss_dssp EEEEECTTSC--EEEEEEEEEETTTTEEEEEETTT
T ss_pred EEEEEEccCc--EEEeEEEEEccCCcEEEEEEccC
Confidence 6788889997 89999999999999999999875
No 396
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=28.08 E-value=32 Score=25.89 Aligned_cols=16 Identities=25% Similarity=0.208 Sum_probs=13.9
Q ss_pred ceeecCCCcEEEEEee
Q 019504 198 GPLLDSKGNLIGINTA 213 (340)
Q Consensus 198 GPl~d~~G~VVGi~~~ 213 (340)
-|++|.+|+++|+++.
T Consensus 119 l~Vvd~~g~~~Giit~ 134 (150)
T 3lqn_A 119 ICAVNEDGYFEGILTR 134 (150)
T ss_dssp EEEECTTCBEEEEEEH
T ss_pred EEEECCCCcEEEEEEH
Confidence 7999989999999764
No 397
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=27.72 E-value=32 Score=28.12 Aligned_cols=21 Identities=33% Similarity=0.463 Sum_probs=16.9
Q ss_pred CCCccceeecCCCcEEEEEee
Q 019504 193 PGNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 193 ~G~SGGPl~d~~G~VVGi~~~ 213 (340)
.+..--|++|.+|+++||++.
T Consensus 145 ~~~~~lpVVD~~g~lvGiIT~ 165 (205)
T 3kxr_A 145 SREIELPVIDDAGELIGRVTL 165 (205)
T ss_dssp SSCSEEEEECTTSBEEEEEEH
T ss_pred cCCCEEEEEcCCCeEEEEEEH
Confidence 455668999999999999653
No 398
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=27.43 E-value=34 Score=25.34 Aligned_cols=20 Identities=25% Similarity=0.263 Sum_probs=16.1
Q ss_pred CCccceeecCCCcEEEEEee
Q 019504 194 GNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 194 G~SGGPl~d~~G~VVGi~~~ 213 (340)
+..--|++|.+|+++|+++.
T Consensus 113 ~~~~l~Vvd~~g~~~Giit~ 132 (144)
T 2nyc_A 113 RVHRFFVVDDVGRLVGVLTL 132 (144)
T ss_dssp TCSEEEEECTTSBEEEEEEH
T ss_pred CCCEEEEECCCCCEEEEEEH
Confidence 44567999989999999764
No 399
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=26.65 E-value=36 Score=24.93 Aligned_cols=20 Identities=40% Similarity=0.534 Sum_probs=16.1
Q ss_pred CCccceeecCCCcEEEEEee
Q 019504 194 GNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 194 G~SGGPl~d~~G~VVGi~~~ 213 (340)
+.+--|++|.+|+++|+++.
T Consensus 97 ~~~~l~Vvd~~g~~~Giit~ 116 (133)
T 2ef7_A 97 NIRHLPVVDDKGNLKGIISI 116 (133)
T ss_dssp TCSEEEEECTTSCEEEEEEH
T ss_pred CCCEEEEECCCCeEEEEEEH
Confidence 45567999989999999764
No 400
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=26.26 E-value=37 Score=25.82 Aligned_cols=17 Identities=35% Similarity=0.436 Sum_probs=14.3
Q ss_pred cceeecCCCcEEEEEee
Q 019504 197 GGPLLDSKGNLIGINTA 213 (340)
Q Consensus 197 GGPl~d~~G~VVGi~~~ 213 (340)
--|++|.+|+++|+++.
T Consensus 117 ~lpVvd~~g~~~Giit~ 133 (156)
T 3ctu_A 117 FLPVVDAEGIFQGIITR 133 (156)
T ss_dssp EEEEECTTSBEEEEEET
T ss_pred eEEEEcCCCeEEEEEEH
Confidence 37899989999999764
No 401
>3s6n_E Small nuclear ribonucleoprotein E; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_E 2y9c_E 2y9d_E 3cw1_E 3pgw_E* 2y9a_E
Probab=25.94 E-value=95 Score=21.91 Aligned_cols=31 Identities=23% Similarity=0.321 Sum_probs=24.8
Q ss_pred EEEEecCCceeEEEEEEEEeCCCCcEEEEEEec
Q 019504 94 VNILASDGVQKNFEGKLVGADRAKDLAVLKIEA 126 (340)
Q Consensus 94 i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~ 126 (340)
+++...+|+ .+.+++.++|...++.|=....
T Consensus 33 l~~~~~~gr--~~~G~L~gfD~~mNlvL~d~~E 63 (92)
T 3s6n_E 33 VWLYEQVNM--RIEGCIIGFDEYMNLVLDDAEE 63 (92)
T ss_dssp EEESSSCSS--EEEEEEEEECTTCCEEEEEEEE
T ss_pred EEEEecCCE--EEEEEEEEEcCcCcEEEeeeEE
Confidence 333348887 8999999999999999877754
No 402
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=25.61 E-value=37 Score=26.53 Aligned_cols=14 Identities=36% Similarity=0.548 Sum_probs=0.0
Q ss_pred eeecCCCcEEEEEe
Q 019504 199 PLLDSKGNLIGINT 212 (340)
Q Consensus 199 Pl~d~~G~VVGi~~ 212 (340)
|++|.+|+++||++
T Consensus 141 pVvd~~g~lvGiit 154 (172)
T 3lhh_A 141 FVVDEYGDLKGLVT 154 (172)
T ss_dssp EEECTTSCEEEEEE
T ss_pred EEEeCCCCEEEEee
No 403
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=25.61 E-value=53 Score=28.11 Aligned_cols=37 Identities=19% Similarity=0.328 Sum_probs=24.2
Q ss_pred ceeecCCCcEEEEEeeeeeCCC-CcCceEEEEehHhHH
Q 019504 198 GPLLDSKGNLIGINTAIITQTG-TSAGVGFAIPSSTVL 234 (340)
Q Consensus 198 GPl~d~~G~VVGi~~~~~~~~~-~~~~~~~aip~~~i~ 234 (340)
||+++.+|+|+|.++.....-. --.--+||+-+..+.
T Consensus 148 gPv~~~~gkVvGw~~~w~~~R~fpiDmAGFA~N~~lll 185 (253)
T 1v84_A 148 APRVNGAGKVVRWKTVFDPHRPFAIDMAGFAVNLRLIL 185 (253)
T ss_dssp EEEECTTSCEEEEECSSCTTSTTCCCGGGEEEEHHHHH
T ss_pred cCeECCCCCEeeeecccCCCCCccceeeeeEEEehhhh
Confidence 7999989999999886322110 012237888887554
No 404
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=25.55 E-value=38 Score=25.16 Aligned_cols=20 Identities=15% Similarity=0.328 Sum_probs=16.3
Q ss_pred CCccceeecCCCcEEEEEee
Q 019504 194 GNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 194 G~SGGPl~d~~G~VVGi~~~ 213 (340)
+.+--|++|.+|+++|+++.
T Consensus 100 ~~~~l~Vvd~~g~~~Giit~ 119 (141)
T 2rih_A 100 NIRHVVVVNKNGELVGVLSI 119 (141)
T ss_dssp TCSEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEcCCCcEEEEEEH
Confidence 44567999989999999775
No 405
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=25.00 E-value=47 Score=25.15 Aligned_cols=22 Identities=9% Similarity=0.176 Sum_probs=17.3
Q ss_pred CCCCccceeecCCCcEEEEEee
Q 019504 192 NPGNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 192 ~~G~SGGPl~d~~G~VVGi~~~ 213 (340)
..+.+.-|++|.+|+++|+++.
T Consensus 45 ~~~~~~~~Vvd~~~~~~Giit~ 66 (156)
T 3ctu_A 45 QMTYTRVPVVTDEKQFVGTIGL 66 (156)
T ss_dssp TCSSSEEEEECC-CBEEEEEEH
T ss_pred HCCCceEeEECCCCEEEEEEcH
Confidence 3567889999999999999663
No 406
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=24.86 E-value=45 Score=25.00 Aligned_cols=21 Identities=33% Similarity=0.449 Sum_probs=18.0
Q ss_pred CCCccceeecCCCcEEEEEee
Q 019504 193 PGNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 193 ~G~SGGPl~d~~G~VVGi~~~ 213 (340)
.+.+.-|++|.+|+++|+++.
T Consensus 46 ~~~~~~pVvd~~~~~~Givt~ 66 (150)
T 3lqn_A 46 SGYSAIPVLDPMYKLHGLIST 66 (150)
T ss_dssp HTCSEEEEECTTCBEEEEEEH
T ss_pred cCCcEEEEECCCCCEEEEEEH
Confidence 466788999999999999874
No 407
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=24.79 E-value=46 Score=25.14 Aligned_cols=21 Identities=29% Similarity=0.460 Sum_probs=17.5
Q ss_pred CCCccceeecCCCcEEEEEee
Q 019504 193 PGNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 193 ~G~SGGPl~d~~G~VVGi~~~ 213 (340)
.+.+.-|++|.+|+++|+++.
T Consensus 50 ~~~~~~pVvd~~~~~vGivt~ 70 (152)
T 2uv4_A 50 HRVSALPVVDEKGRVVDIYSK 70 (152)
T ss_dssp HCCSEEEEECTTSBEEEEEEH
T ss_pred cCCceEeEECCCCcEEEEEeH
Confidence 356788999989999999774
No 408
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=24.75 E-value=39 Score=26.20 Aligned_cols=14 Identities=57% Similarity=1.023 Sum_probs=0.0
Q ss_pred eeecCCCcEEEEEe
Q 019504 199 PLLDSKGNLIGINT 212 (340)
Q Consensus 199 Pl~d~~G~VVGi~~ 212 (340)
|++|.+|+++|+++
T Consensus 133 pVvd~~g~~vGiit 146 (180)
T 3sl7_A 133 PVVDADGKLIGILT 146 (180)
T ss_dssp EEECTTCBEEEEEE
T ss_pred EEECCCCeEEEEEE
No 409
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=24.53 E-value=47 Score=21.12 Aligned_cols=20 Identities=10% Similarity=0.360 Sum_probs=16.1
Q ss_pred CCCccceeecCCCcEEEEEee
Q 019504 193 PGNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 193 ~G~SGGPl~d~~G~VVGi~~~ 213 (340)
.+.+.-|++|. |+++|+++.
T Consensus 21 ~~~~~~pV~d~-~~l~Givt~ 40 (70)
T 3fio_A 21 NKAGSAVVMEG-DEILGVVTE 40 (70)
T ss_dssp TTCSEEEEEET-TEEEEEEEH
T ss_pred cCCCEEEEEEC-CEEEEEEEH
Confidence 46677899986 999999764
No 410
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=24.05 E-value=37 Score=26.74 Aligned_cols=14 Identities=29% Similarity=0.382 Sum_probs=0.0
Q ss_pred eeecCCCcEEEEEe
Q 019504 199 PLLDSKGNLIGINT 212 (340)
Q Consensus 199 Pl~d~~G~VVGi~~ 212 (340)
|++|.+|+++||++
T Consensus 134 ~Vvde~g~lvGiIT 147 (173)
T 3ocm_A 134 LVADEFGAIEGLVT 147 (173)
T ss_dssp EEECTTCCEEEEEC
T ss_pred EEEeCCCCEEEEEe
No 411
>4dah_A Sporulation kinase D; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology, PAS-like fold; 2.03A {Bacillus subtilis} PDB: 4dbj_A 4dbi_A 4dak_A 3fos_A
Probab=23.31 E-value=1e+02 Score=24.62 Aligned_cols=31 Identities=32% Similarity=0.347 Sum_probs=24.6
Q ss_pred ceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHHHHHHHHH
Q 019504 198 GPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVLKIVPQLI 241 (340)
Q Consensus 198 GPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~ 241 (340)
-|+.+.+|+++|+... .++.+.+.++++.+.
T Consensus 130 ~pi~~~~g~~~Gvl~~-------------~i~l~~l~~~~~~~~ 160 (217)
T 4dah_A 130 VPVLDSKRNVTDYLVA-------------AIQIDYLKNLINLLS 160 (217)
T ss_dssp EEEECTTSCEEEEEEE-------------EEEHHHHHHHHHHHC
T ss_pred EEEECCCCCEEEEEEE-------------EEcHHHHHHHHHhcC
Confidence 5788778999999654 578888888887763
No 412
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=23.23 E-value=1.5e+02 Score=18.94 Aligned_cols=34 Identities=21% Similarity=0.383 Sum_probs=30.7
Q ss_pred EEEEEecCCceeEEEEEEEEeCCCCcEEEEEEecCC
Q 019504 93 RVNILASDGVQKNFEGKLVGADRAKDLAVLKIEASE 128 (340)
Q Consensus 93 ~i~v~~~~g~~~~~~a~v~~~d~~~DlAlL~v~~~~ 128 (340)
++-++..||. .|.++++..+....-+++++....
T Consensus 9 dVLarwsDG~--fYlGtI~~V~~~~~~clV~F~D~s 42 (58)
T 4hcz_A 9 DVLARWTDGL--LYLGTIKKVDSAREVCLVQFEDDS 42 (58)
T ss_dssp EEEEECTTSC--EEEEEEEEEETTTTEEEEEETTSC
T ss_pred EEEEEecCCC--EEeEEEEEEecCCCEEEEEEcCCC
Confidence 7888999997 899999999999999999998764
No 413
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=23.02 E-value=51 Score=25.22 Aligned_cols=21 Identities=24% Similarity=0.400 Sum_probs=17.6
Q ss_pred CCCccceeecCCCcEEEEEee
Q 019504 193 PGNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 193 ~G~SGGPl~d~~G~VVGi~~~ 213 (340)
.+.++-|++|.+|+++|+++.
T Consensus 34 ~~~~~~pVvd~~~~lvGivt~ 54 (160)
T 2o16_A 34 LDIRHVPIVDANKKLLGIVSQ 54 (160)
T ss_dssp HTCSEEEEECTTCBEEEEEEH
T ss_pred cCCCEEEEEcCCCcEEEEEeH
Confidence 366788999989999999774
No 414
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=22.83 E-value=52 Score=25.01 Aligned_cols=21 Identities=29% Similarity=0.408 Sum_probs=17.8
Q ss_pred CCCccceeecCCCcEEEEEee
Q 019504 193 PGNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 193 ~G~SGGPl~d~~G~VVGi~~~ 213 (340)
.+.+.-|++|.+|+++|+++.
T Consensus 45 ~~~~~~pVvd~~~~lvGivt~ 65 (159)
T 1yav_A 45 TGYTAIPVLDPSYRLHGLIGT 65 (159)
T ss_dssp HCCSEEEEECTTCBEEEEEEH
T ss_pred CCCcEEEEECCCCCEEEEeEH
Confidence 467789999999999999874
No 415
>3o8b_A HCV NS3 protease/helicase; ntpase, RNA, translocation, protein-RNA compl protease/ntpase/helicase, hydrolase; 1.95A {Hepatitis c virus} PDB: 3o8c_A* 3o8d_A* 3o8r_A* 4b71_A* 4b73_A* 4b74_A* 4b76_A* 4b75_A* 4a92_A* 1cu1_A 4b6e_A* 4b6f_A* 2zjo_A* 1a1v_A* 1hei_A 3kqn_A* 3kql_A* 3kqu_A* 3kqh_A 3kqk_A ...
Probab=22.80 E-value=93 Score=30.71 Aligned_cols=44 Identities=34% Similarity=0.622 Sum_probs=31.0
Q ss_pred ccCCCCccceeecCCCcEEEEEeeeeeCCCCcCceEEEEehHhHH
Q 019504 190 AINPGNSGGPLLDSKGNLIGINTAIITQTGTSAGVGFAIPSSTVL 234 (340)
Q Consensus 190 ~i~~G~SGGPl~d~~G~VVGi~~~~~~~~~~~~~~~~aip~~~i~ 234 (340)
....|.||+|++-..|..+|+..+.....+....+.| .|++.+.
T Consensus 168 ~~~~~~sg~~~l~~~g~~~g~~~s~~~~rG~~~~~~f-~p~e~l~ 211 (666)
T 3o8b_A 168 SYLKGSSGGPLLCPSGHAVGIFRAAVCTRGVAKAVDF-VPVESME 211 (666)
T ss_dssp GGGTTCTTCEEECTTSCEEEEEEEEEEETTEEEEEEE-EEHHHHH
T ss_pred hhhhccCCCceeccCcccccceecccccccccccccc-cchHhhh
Confidence 3457999999998899999998876343333345556 7766543
No 416
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=22.63 E-value=54 Score=24.09 Aligned_cols=21 Identities=19% Similarity=0.294 Sum_probs=17.7
Q ss_pred CCCccceeecCCCcEEEEEee
Q 019504 193 PGNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 193 ~G~SGGPl~d~~G~VVGi~~~ 213 (340)
.+.+.-|++|.+|+++|+++.
T Consensus 36 ~~~~~~~Vvd~~~~~~Givt~ 56 (138)
T 2yzi_A 36 FDVGSLVVINDDGNVVGFFTK 56 (138)
T ss_dssp HTCSEEEEECTTSCEEEEEEH
T ss_pred cCCCEEEEEcCCCcEEEEEeH
Confidence 356788999989999999874
No 417
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=22.51 E-value=47 Score=25.29 Aligned_cols=20 Identities=25% Similarity=0.461 Sum_probs=16.1
Q ss_pred CCccceeecCCCcEEEEEee
Q 019504 194 GNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 194 G~SGGPl~d~~G~VVGi~~~ 213 (340)
+...-|++|.+|+++|+++.
T Consensus 125 ~~~~lpVvd~~g~~vGiit~ 144 (157)
T 1o50_A 125 NIQEMPVVDEKGEIVGDLNS 144 (157)
T ss_dssp TCSEEEEECTTSCEEEEEEH
T ss_pred CCcEEEEEcCCCEEEEEEEH
Confidence 44567999989999999764
No 418
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=22.03 E-value=57 Score=24.63 Aligned_cols=21 Identities=33% Similarity=0.464 Sum_probs=17.9
Q ss_pred CCCccceeecCCCcEEEEEee
Q 019504 193 PGNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 193 ~G~SGGPl~d~~G~VVGi~~~ 213 (340)
.+.+.-|++|.+|+++|+++.
T Consensus 42 ~~~~~~pVvd~~~~~~Givt~ 62 (157)
T 2emq_A 42 TGYSAIPVLDTSYKLHGLISM 62 (157)
T ss_dssp SSSSEEEEECTTCCEEEEEEH
T ss_pred CCceEEEEEcCCCCEEEEeeH
Confidence 466788999989999999874
No 419
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=21.39 E-value=61 Score=24.27 Aligned_cols=21 Identities=14% Similarity=0.336 Sum_probs=17.9
Q ss_pred CCCccceeecCC-CcEEEEEee
Q 019504 193 PGNSGGPLLDSK-GNLIGINTA 213 (340)
Q Consensus 193 ~G~SGGPl~d~~-G~VVGi~~~ 213 (340)
.+.+.-|++|.+ |+++|+++.
T Consensus 54 ~~~~~~pVvd~~~~~lvGivt~ 75 (148)
T 3lv9_A 54 EGVTRYPVCRKNKDDILGFVHI 75 (148)
T ss_dssp SCCSEEEEESSSTTSEEEEEEH
T ss_pred CCCCEEEEEcCCCCcEEEEEEH
Confidence 577889999987 899999874
No 420
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=21.30 E-value=48 Score=27.52 Aligned_cols=21 Identities=19% Similarity=0.355 Sum_probs=18.4
Q ss_pred CCCccceeecCCCcEEEEEee
Q 019504 193 PGNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 193 ~G~SGGPl~d~~G~VVGi~~~ 213 (340)
.+.+.=|++|.+|+++||++.
T Consensus 215 ~~~~~~pVvd~~~~~~Giit~ 235 (245)
T 3l2b_A 215 TRYSNYPVIDENNKVVGSIAR 235 (245)
T ss_dssp HCCSEEEEECTTCBEEEEEEC
T ss_pred cCCceEEEEcCCCeEEEEEEH
Confidence 567789999999999999875
No 421
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=21.26 E-value=62 Score=24.04 Aligned_cols=21 Identities=24% Similarity=0.447 Sum_probs=18.1
Q ss_pred CCCccceeecCCCcEEEEEee
Q 019504 193 PGNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 193 ~G~SGGPl~d~~G~VVGi~~~ 213 (340)
.+.+.-|++|.+|+++|+.+.
T Consensus 36 ~~~~~~~Vvd~~~~~~G~vt~ 56 (152)
T 4gqw_A 36 NRITGFPVIDEDWKLVGLVSD 56 (152)
T ss_dssp TTCSEEEEECTTCBEEEEEEH
T ss_pred cCCceEEEEeCCCeEEEEEEH
Confidence 467789999999999999884
No 422
>2l32_A Small archaeal modifier protein 2; protein BIN; NMR {Haloferax volcanii}
Probab=20.84 E-value=44 Score=22.54 Aligned_cols=29 Identities=21% Similarity=0.331 Sum_probs=20.8
Q ss_pred cCCcEEEEECCEEccCCCCCCCceeEEEeeCCCCceEEEEe
Q 019504 298 ILGDIIVAVNNKPVSFSCLSIPSRIYLICAEPNQDHLTCLK 338 (340)
Q Consensus 298 ~~GDvi~~i~g~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~ 338 (340)
.+..+++.+||+.+.-.. .. .+|+|+|++
T Consensus 33 ~~~~VvV~vNG~~v~~d~-----------~l-~GD~VeIv~ 61 (74)
T 2l32_A 33 SPHEVTVLVDGRPVPEDQ-----------SV-EVDRVKVLR 61 (74)
T ss_dssp CSSCCCEECCCCCCCTTS-----------SS-CCCCEEECS
T ss_pred CcceEEEEECCEECCHHH-----------CC-CCCEEEEEE
Confidence 678899999999885332 12 268888876
No 423
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=20.81 E-value=62 Score=23.68 Aligned_cols=21 Identities=33% Similarity=0.450 Sum_probs=17.6
Q ss_pred CCCccceeecCCCcEEEEEee
Q 019504 193 PGNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 193 ~G~SGGPl~d~~G~VVGi~~~ 213 (340)
.+.+.-|++|.+|+++|+.+.
T Consensus 37 ~~~~~~~Vvd~~~~~~Givt~ 57 (138)
T 2p9m_A 37 YKISSLPVIDDENKVIGIVTT 57 (138)
T ss_dssp HTCCEEEEECTTCBEEEEEEH
T ss_pred CCCcEEEEECCCCeEEEEEEH
Confidence 366788999989999999874
No 424
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=20.42 E-value=64 Score=24.22 Aligned_cols=21 Identities=29% Similarity=0.267 Sum_probs=17.7
Q ss_pred CCCccceeecCCCcEEEEEee
Q 019504 193 PGNSGGPLLDSKGNLIGINTA 213 (340)
Q Consensus 193 ~G~SGGPl~d~~G~VVGi~~~ 213 (340)
.+.+.-|++|.+|+++|+++.
T Consensus 59 ~~~~~~~Vvd~~~~~~Givt~ 79 (149)
T 3k2v_A 59 KNLGMTAICDDDMNIIGIFTD 79 (149)
T ss_dssp HTSSEEEEECTTCBEEEEEEH
T ss_pred CCCcEEEEECCCCcEEEEecH
Confidence 466788999999999999874
No 425
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=20.39 E-value=64 Score=23.82 Aligned_cols=21 Identities=19% Similarity=0.422 Sum_probs=17.9
Q ss_pred CCCccceeecCC-CcEEEEEee
Q 019504 193 PGNSGGPLLDSK-GNLIGINTA 213 (340)
Q Consensus 193 ~G~SGGPl~d~~-G~VVGi~~~ 213 (340)
.+.+.-|++|.+ |+++|+++.
T Consensus 34 ~~~~~~pVvd~~~~~~vGivt~ 55 (136)
T 3lfr_A 34 AAHSRYPVIGESHDDVLGVLLA 55 (136)
T ss_dssp HCCSEEEEESSSTTCEEEEEEG
T ss_pred CCCCEEEEEcCCCCcEEEEEEH
Confidence 467889999987 899999875
No 426
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=20.36 E-value=75 Score=30.71 Aligned_cols=19 Identities=26% Similarity=0.373 Sum_probs=17.0
Q ss_pred cCCcEEEEECCEEccCCCC
Q 019504 298 ILGDIIVAVNNKPVSFSCL 316 (340)
Q Consensus 298 ~~GDvi~~i~g~~v~~~~d 316 (340)
..||.|++|||+++...-+
T Consensus 111 ~vGdEIlsING~pv~e~Le 129 (583)
T 3dor_A 111 RVGDELLEVDGAPVQDVLA 129 (583)
T ss_dssp CTTCEEEEETTEEHHHHHH
T ss_pred CCCCEEEEECCccHHHHHH
Confidence 8999999999999987654
Done!