Your job contains 1 sequence.
>019505
MQSHSGKASVRVEKEANEFLGSSLLSNLDESLHEPIDVPSSTSSSASEGQSDETVEGDDQ
INGDASKQLVLYDPTANGTSEIEPVPESFQYNRAPFGRYSGPNTQSRVLPSVGAFTVQCA
DCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRLWAIDKPN
IAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQ
FSFQIPKPLQENYVRKRVPKAHTSHDTPKALEPRAVSPLSWVSPDNFTDLQLGRPALPAP
PVEAPISDPNPRPAKQARRAPKQMYSGSPISSDHKFRAEE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019505
(340 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2182643 - symbol:MBD02 "methyl-CPG-binding dom... 719 4.8e-71 1
TAIR|locus:504954793 - symbol:MBD12 "methyl-CPG-binding d... 378 6.5e-35 1
TAIR|locus:2099187 - symbol:MBD4 "methyl-CPG-binding doma... 305 3.5e-27 1
TAIR|locus:505006513 - symbol:MBD1 "methyl-CPG-binding do... 290 1.4e-25 1
TAIR|locus:505006418 - symbol:MBD3 "methyl-CPG-binding do... 169 2.7e-12 1
RGD|1305980 - symbol:Mbd1 "methyl-CpG binding domain prot... 122 0.00016 1
UNIPROTKB|H7C092 - symbol:BAZ2B "Bromodomain adjacent to ... 108 0.00068 1
>TAIR|locus:2182643 [details] [associations]
symbol:MBD02 "methyl-CPG-binding domain protein 02"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0051747 "cytosine C-5 DNA demethylase
activity" evidence=IDA] [GO:0019899 "enzyme binding" evidence=IPI]
InterPro:IPR001739 InterPro:IPR011124 InterPro:IPR016177
Pfam:PF01429 Pfam:PF07496 PROSITE:PS50982 PROSITE:PS51050
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
SUPFAM:SSF54171 Gene3D:3.30.890.10 EMBL:AB025636 EMBL:AF058826
EMBL:AY088026 EMBL:BT025800 EMBL:BT005718 EMBL:AK228378
IPI:IPI00547921 PIR:T01176 RefSeq:NP_001190421.1 RefSeq:NP_198383.1
RefSeq:NP_974850.1 UniGene:At.24132 ProteinModelPortal:Q8LA53
SMR:Q8LA53 IntAct:Q8LA53 STRING:Q8LA53 PaxDb:Q8LA53 PRIDE:Q8LA53
DNASU:833487 EnsemblPlants:AT5G35330.1 EnsemblPlants:AT5G35330.2
EnsemblPlants:AT5G35330.3 GeneID:833487 KEGG:ath:AT5G35330
TAIR:At5g35330 eggNOG:NOG239994 HOGENOM:HOG000243216
InParanoid:Q8LA53 OMA:ADVYYVA PhylomeDB:Q8LA53
ProtClustDB:CLSN2716414 Genevestigator:Q8LA53 Uniprot:Q8LA53
Length = 272
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 145/280 (51%), Positives = 188/280 (67%)
Query: 55 VEGDDQINGDASK-QLVLYDPTANGTSEIEPVPESFQYNRAPFGRYSGPNTQSRVLPSVG 113
V+ N D + QLV+YD N +E E +P Q P TQ PS+G
Sbjct: 9 VQRSSSPNEDRGENQLVVYDLKGNDDTEEEVLPVQSQ----PLSS----RTQC---PSIG 57
Query: 114 AFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRL 173
AFTVQCA CFKWRL+P+ +KYEEIRE +LENPF C+ AREW+PD+SCD P DI QDG+RL
Sbjct: 58 AFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQDGTRL 117
Query: 174 WAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYAR 233
WAIDKPNI++PP GWQRLLRIRGEG T+FADVYY APSGKKLRS VE+QKY ++ EY
Sbjct: 118 WAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNSEYIG 177
Query: 234 AGVKMSQFSFQIPKPLQENYVRKRVPKAHTSHDTPKALEPRAVSPLSWVSPDNFTDLQLG 293
GVK+SQFSFQIPKPLQ++YVRKR + S D + +PL+W+SPD+ LQLG
Sbjct: 178 EGVKLSQFSFQIPKPLQDDYVRKRPARLLDSIDNTNTPVAKEANPLAWISPDDHISLQLG 237
Query: 294 RPALPAPPVEAPISDPNPRPAKQARRAPKQMYSGSPISSD 333
P E+ +++ + +P+K+ + + ++ + +D
Sbjct: 238 TPT------ESGLNNSHYQPSKKKKTSTLSIFGSNDELAD 271
>TAIR|locus:504954793 [details] [associations]
symbol:MBD12 "methyl-CPG-binding domain 12"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008327 "methyl-CpG binding" evidence=ISS]
InterPro:IPR001739 InterPro:IPR011124 InterPro:IPR016177
Pfam:PF01429 Pfam:PF07496 PROSITE:PS50982 PROSITE:PS51050
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 SUPFAM:SSF54171
Gene3D:3.30.890.10 GO:GO:0008327 EMBL:AB025636 EMBL:AF058826
IPI:IPI00521656 RefSeq:NP_974851.1 UniGene:At.51429
ProteinModelPortal:Q9FZP6 SMR:Q9FZP6 EnsemblPlants:AT5G35338.2
GeneID:833492 KEGG:ath:AT5G35338 TAIR:At5g35338 eggNOG:NOG276449
HOGENOM:HOG000152600 InParanoid:Q9FZP6 OMA:CKKWRLI PhylomeDB:Q9FZP6
ProtClustDB:CLSN2915218 Genevestigator:Q9FZP6 Uniprot:Q9FZP6
Length = 155
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 76/143 (53%), Positives = 92/143 (64%)
Query: 117 VQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRL--W 174
VQC DC KWRLIP+ + Y I+E L+ PF C W P++SC+ P QDG+ W
Sbjct: 2 VQCTDCKKWRLIPSMQHYNIIKETQLQTPFVCGTTSGWTPNMSCNVP----QDGTTCDTW 57
Query: 175 AIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
P+I P GW R + IR E STKFADVYY PSG++LRS E+Q + HPEY R
Sbjct: 58 ----PSIPPIPTGWSRSVHIRSE-STKFADVYYFPPSGERLRSSAEVQSFLDNHPEYVRE 112
Query: 235 GVKMSQFSFQIPKPLQENYVRKR 257
GV SQFSFQIPKPL +NYV+KR
Sbjct: 113 GVNRSQFSFQIPKPLDDNYVKKR 135
>TAIR|locus:2099187 [details] [associations]
symbol:MBD4 "methyl-CPG-binding domain 4" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008327 "methyl-CpG binding" evidence=ISS]
[GO:0051747 "cytosine C-5 DNA demethylase activity" evidence=IDA]
InterPro:IPR001739 InterPro:IPR011124 InterPro:IPR016177
Pfam:PF01429 Pfam:PF07496 PROSITE:PS50982 PROSITE:PS51050
SMART:SM00391 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
SUPFAM:SSF54171 Gene3D:3.30.890.10 EMBL:AL163816 GO:GO:0008327
HOGENOM:HOG000241427 EMBL:BT010516 EMBL:AK176600 IPI:IPI00524248
PIR:T48092 RefSeq:NP_191862.1 UniGene:At.66481 HSSP:Q9UNZ9
ProteinModelPortal:Q9LYB9 SMR:Q9LYB9 PaxDb:Q9LYB9 PRIDE:Q9LYB9
EnsemblPlants:AT3G63030.1 GeneID:825478 KEGG:ath:AT3G63030
TAIR:At3g63030 eggNOG:NOG329704 InParanoid:Q9LYB9 OMA:SCEEPAD
PhylomeDB:Q9LYB9 ProtClustDB:CLSN2914707 Genevestigator:Q9LYB9
Uniprot:Q9LYB9
Length = 186
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 60/157 (38%), Positives = 94/157 (59%)
Query: 97 GRYSGPNTQSRVLPS--VGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREW 154
G+ + P + V P + + QC +C KWR+I ++E+YE+IR +LE+PF C+K
Sbjct: 8 GKPAKPKAKKDVAPGRLIDTYAAQCDNCHKWRVIDSQEEYEDIRSKMLEDPFNCQK---- 63
Query: 155 RPDVSCDDPTDISQDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKK 214
+ +SC++P DI D SR W IDKP + + P G++R L +R + S D YY P+GKK
Sbjct: 64 KQGMSCEEPADIDYDSSRTWVIDKPGLPKTPKGFKRSLVLRKDYSKM--DTYYFTPTGKK 121
Query: 215 LRSMVEIQKYFLEHPEYARAGVKMSQFSFQIPKPLQE 251
LRS EI + +PE+ A + F+F +PK +++
Sbjct: 122 LRSRNEIAAFVEANPEFRNA--PLGDFNFTVPKVMED 156
>TAIR|locus:505006513 [details] [associations]
symbol:MBD1 "methyl-CPG-binding domain 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM] [GO:0008327
"methyl-CpG binding" evidence=ISS] [GO:0051747 "cytosine C-5 DNA
demethylase activity" evidence=IDA] InterPro:IPR001739
InterPro:IPR011124 InterPro:IPR016177 Pfam:PF01429 Pfam:PF07496
PROSITE:PS50982 PROSITE:PS51050 SMART:SM00391 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 SUPFAM:SSF54171 EMBL:AL161557
EMBL:AL021635 Gene3D:3.30.890.10 GO:GO:0008327 EMBL:BT015931
EMBL:BT020548 IPI:IPI00540903 PIR:T04569 RefSeq:NP_567667.2
UniGene:At.32504 HSSP:P51608 ProteinModelPortal:Q5XEN5 SMR:Q5XEN5
IntAct:Q5XEN5 PaxDb:Q5XEN5 PRIDE:Q5XEN5 EnsemblPlants:AT4G22745.1
GeneID:828371 KEGG:ath:AT4G22745 TAIR:At4g22745 eggNOG:NOG317091
HOGENOM:HOG000241427 InParanoid:Q5XEN5 OMA:DANQDYK PhylomeDB:Q5XEN5
ProtClustDB:CLSN2918164 Genevestigator:Q5XEN5 Uniprot:Q5XEN5
Length = 204
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 65/159 (40%), Positives = 91/159 (57%)
Query: 111 SVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDG 170
S+ F VQC C KWR I T+++YE+IR V E+PF C K +E VSC+D D++ D
Sbjct: 51 SIDVFAVQCEKCMKWRKIDTQDEYEDIRSRVQEDPFFC-KTKE---GVSCEDVGDLNYDS 106
Query: 171 SRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPE 230
SR W IDKP + + P G++R L +R + S D YY P+GKKL+S EI + + +
Sbjct: 107 SRTWVIDKPGLPRTPRGFKRSLILRKDYSKM--DAYYITPTGKKLKSRNEIAAFIDANQD 164
Query: 231 YARAGVKMSQFSFQIPKPLQENYVRKRVPKAHTSHDTPK 269
Y A + F+F +PK ++E VP S TPK
Sbjct: 165 YKYA--LLGDFNFTVPKVMEET-----VPSGILSDRTPK 196
>TAIR|locus:505006418 [details] [associations]
symbol:MBD3 "methyl-CPG-binding domain 3" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008327 "methyl-CpG binding" evidence=ISS]
InterPro:IPR001739 InterPro:IPR011124 InterPro:IPR016177
Pfam:PF01429 Pfam:PF07496 PROSITE:PS50982 PROSITE:PS51050
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 SUPFAM:SSF54171
EMBL:AF013293 EMBL:AF195115 EMBL:AL161471 Gene3D:3.30.890.10
GO:GO:0008327 HOGENOM:HOG000241427 EMBL:DQ056635 IPI:IPI00527503
RefSeq:NP_567177.1 UniGene:At.54061 ProteinModelPortal:Q4PSK1
SMR:Q4PSK1 EnsemblPlants:AT4G00416.1 GeneID:828069
KEGG:ath:AT4G00416 TAIR:At4g00416 eggNOG:NOG241580
InParanoid:Q4PSK1 OMA:TTLIDSY PhylomeDB:Q4PSK1
ProtClustDB:CLSN2917464 Genevestigator:Q4PSK1 Uniprot:Q4PSK1
Length = 163
Score = 169 (64.5 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 48/158 (30%), Positives = 81/158 (51%)
Query: 112 VGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGS 171
+ ++ QC C K R I ++E YEEIR LE F C++ C++P D+ +
Sbjct: 9 IDSYAAQCWKCLKVRSIESQEDYEEIRSKTLEKFFECKR---------CEEPGDMVMNFD 59
Query: 172 RL---WAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYE--APSGKKLRSMVEIQKYFL 226
L W D+ +I + P G +R+L +R K DVYYE AP K+ +S+ E+ +
Sbjct: 60 SLTMRWFQDEHSIPKTPQGLKRVLVVR-TNCVK-VDVYYESLAPRRKRFKSIKEVATFIE 117
Query: 227 EHPEYARAGVKMSQFSFQIPKPLQENYVRKRVPKAHTS 264
+ E+ + + + SF PK L+ ++K+ +H+S
Sbjct: 118 DKEEFK--DMTLEEVSFAAPKRLK---LKKKPVDSHSS 150
>RGD|1305980 [details] [associations]
symbol:Mbd1 "methyl-CpG binding domain protein 1" species:10116
"Rattus norvegicus" [GO:0000785 "chromatin" evidence=ISO]
[GO:0000792 "heterochromatin" evidence=IEA;ISO] [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001739
InterPro:IPR002857 InterPro:IPR016177 Pfam:PF01429 Pfam:PF02008
PROSITE:PS50982 PROSITE:PS51058 SMART:SM00391 RGD:1305980
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0008270
SUPFAM:SSF54171 GO:GO:0000792 Gene3D:3.30.890.10
GeneTree:ENSGT00530000063643 CTD:4152 eggNOG:NOG145219
HOVERGEN:HBG052416 KO:K11589 OrthoDB:EOG4ZPDVZ HOGENOM:HOG000069958
EMBL:BC081932 IPI:IPI00471843 RefSeq:NP_001011924.1 UniGene:Rn.3310
SMR:Q66HB8 STRING:Q66HB8 Ensembl:ENSRNOT00000032202 GeneID:291439
KEGG:rno:291439 NextBio:632587 Genevestigator:Q66HB8 Uniprot:Q66HB8
Length = 533
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 41/136 (30%), Positives = 60/136 (44%)
Query: 186 PGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQ 244
PGW+R R G S +D+YY +P+G+K+RS +E+ +Y + +
Sbjct: 13 PGWKRREAFRKSGASCGRSDIYYRSPTGEKIRSKIELTRYLGPACDLTLFDFRQGILCHP 72
Query: 245 IPK--PLQENYVRKRV---P-KAHTSHDTPKALEPRAVSPLSWVSPDNFTDLQLGRPALP 298
+PK PL +K+ P KA P+ E R +P T L + P
Sbjct: 73 VPKTHPLAVPSKKKKKTSKPAKAKKQQVGPQRSEVRKETPREGNKVAPATALLPVTASAP 132
Query: 299 APPVEAPISDPNPRPA 314
AP V P+S P P PA
Sbjct: 133 AP-VPVPVSAPAPAPA 147
>UNIPROTKB|H7C092 [details] [associations]
symbol:BAZ2B "Bromodomain adjacent to zinc finger domain
protein 2B" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001739 InterPro:IPR016177 Pfam:PF01429 PROSITE:PS50982
SMART:SM00391 GO:GO:0005634 GO:GO:0003677 SUPFAM:SSF54171
Gene3D:3.30.890.10 HGNC:HGNC:963 ChiTaRS:BAZ2B EMBL:AC008277
EMBL:AC009506 ProteinModelPortal:H7C092 Ensembl:ENST00000441143
Uniprot:H7C092
Length = 194
Score = 108 (43.1 bits), Expect = 0.00068, P = 0.00068
Identities = 29/67 (43%), Positives = 35/67 (52%)
Query: 161 DDPTDISQDGS--RLWAIDKPNIAQPPP-GWQRLLRIRGEGSTKFADVYYEAPSGKKLRS 217
DD +D SQ G+ R D+ + P GWQR RIR G +V Y AP GKKLR
Sbjct: 57 DDESDDSQSGTSKRRRVTDERELRIPLEYGWQRETRIRNFGGRLQGEVAYYAPCGKKLRQ 116
Query: 218 MVEIQKY 224
E+ KY
Sbjct: 117 YPEVIKY 123
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.132 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 340 328 0.00088 116 3 11 23 0.46 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 616 (65 KB)
Total size of DFA: 249 KB (2134 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.89u 0.14s 33.03t Elapsed: 00:00:01
Total cpu time: 32.89u 0.14s 33.03t Elapsed: 00:00:01
Start: Mon May 20 16:02:51 2013 End: Mon May 20 16:02:52 2013