BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019505
(340 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225468218|ref|XP_002263085.1| PREDICTED: methyl-CpG-binding domain-containing protein 2 [Vitis
vinifera]
gi|297736061|emb|CBI24099.3| unnamed protein product [Vitis vinifera]
Length = 354
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/345 (60%), Positives = 238/345 (68%), Gaps = 12/345 (3%)
Query: 4 HSGKASVRVEKEANEFLGSSLLSNLDESLHEPIDVPSSTSSSASEGQSDETVEGDDQING 63
H GK + KE N+ GSSL LD +L PID+ SS ++ +
Sbjct: 3 HPGKIYRKANKEENDLTGSSLPRYLD-ALQVPIDLSSSEEEEEDFYAEEDDDNHSYE--- 58
Query: 64 DASKQLVLYDPTANGTSEIEPVPESFQYNRAPFGRYSGPNTQSRVLPSVGAFTVQCADCF 123
+ S QLV+YDP AN +E+EPVP+ QY F YS N SRVLPSVGAFTVQCA+CF
Sbjct: 59 NTSNQLVVYDPVANSATEVEPVPDPIQYRLPSFTGYSTTNAPSRVLPSVGAFTVQCANCF 118
Query: 124 KWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRLWAIDKPNIAQ 183
KWRLIPTKEKYEEIREH+LE PF CE AREWRP+VSCDDP DISQDGSRLWAIDKPNIAQ
Sbjct: 119 KWRLIPTKEKYEEIREHILEQPFVCETAREWRPNVSCDDPADISQDGSRLWAIDKPNIAQ 178
Query: 184 PPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PP GWQRLLRIRGEGSTKFADVYY APSGK+LRSMVE+QKY LEHPEY GV +SQFSF
Sbjct: 179 PPAGWQRLLRIRGEGSTKFADVYYVAPSGKRLRSMVEVQKYLLEHPEYMVHGVTLSQFSF 238
Query: 244 QIPKPLQENYVRKRVPKAH-------TSHDTPKALEPRAVSPLSWVSPDNFTDLQLGRPA 296
QIPKPLQENYVRKR + + TS + LEP V+PLSW P DLQL P
Sbjct: 239 QIPKPLQENYVRKRPARVNAGSYDDTTSSGMSRPLEPGEVNPLSWAGPAECIDLQLRTPG 298
Query: 297 LPAPPVEAPISDPNPRPAKQARRA-PKQMYSGSPISSDHKFRAEE 340
L AP EAP+ DP RP KQARR P+ MY + + + K + EE
Sbjct: 299 LSAPYFEAPVFDPVSRPTKQARRTLPRDMYDSNMVYNQQKVKVEE 343
>gi|224118772|ref|XP_002331442.1| methyl binding domain protein [Populus trichocarpa]
gi|222873656|gb|EEF10787.1| methyl binding domain protein [Populus trichocarpa]
Length = 343
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/342 (61%), Positives = 251/342 (73%), Gaps = 12/342 (3%)
Query: 1 MQSHSGKASVRVEKEANEFLGSSLLSNLDESLHEPIDVPSSTSSSASEGQSDETVEGDDQ 60
MQSH G+ ++KE ++ GS +L+ SL EPI+V SS++ S+ +T + DDQ
Sbjct: 1 MQSHPGETFHVLKKEGDDCTGSRYTGHLNSSLQEPIEVSSSSNEDNSD----DTWDIDDQ 56
Query: 61 INGDASKQLVLYDPTANGTSEIEPVPESFQYNRAPFGRYSGPNTQSRVLPSVGAFTVQCA 120
D+SKQLVLYDP AN EIEPVP+ + PF RYS N SRVLPSVGAFTVQCA
Sbjct: 57 SIEDSSKQLVLYDPLANDAGEIEPVPQPI-LSHHPFRRYSDLNVPSRVLPSVGAFTVQCA 115
Query: 121 DCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRLWAIDKPN 180
CFKWRLIPTK+KYEE+REH+LE PF CE AREWRPD+SCDDPTDI QDGSRLWAIDKPN
Sbjct: 116 KCFKWRLIPTKQKYEELREHILEEPFFCETAREWRPDISCDDPTDIDQDGSRLWAIDKPN 175
Query: 181 IAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQ 240
IAQPPPGWQRLLRIRGEGSTKFADVYY+APSGK+LRSMVEIQKY +EHPEY R G+ ++Q
Sbjct: 176 IAQPPPGWQRLLRIRGEGSTKFADVYYQAPSGKRLRSMVEIQKYLIEHPEYMRDGITLTQ 235
Query: 241 FSFQIPKPLQENYVRKRVPKAHTSHDTPKALEPRAVSPLSWVSPDNFTDLQLGRPA-LPA 299
FSFQIPKPLQENYVRK+ P+ S LEP +PL WV P + T+LQLGRPA LP
Sbjct: 236 FSFQIPKPLQENYVRKKRPRLSAS-----CLEPGEANPLKWVGPGDCTELQLGRPAILPP 290
Query: 300 PPVEAPISDPNPRPAKQARRAP-KQMYSGSPISSDHKFRAEE 340
P +++ P P K+ R P KQ + +P+ + + + EE
Sbjct: 291 PLIQSSAYLPFYWPVKKKARTPSKQSHRTNPVCNLDEPKVEE 332
>gi|224087333|ref|XP_002308125.1| methyl binding domain protein [Populus trichocarpa]
gi|222854101|gb|EEE91648.1| methyl binding domain protein [Populus trichocarpa]
Length = 328
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/341 (58%), Positives = 239/341 (70%), Gaps = 25/341 (7%)
Query: 1 MQSHSGKASVRVEKEANEFLGSSLLSNLDESLHEPIDVPSSTSSSASEGQSDETVEGDDQ 60
MQS + V+KEA+ S +L +L EPI+V SS++E S +T + DD
Sbjct: 1 MQSRPEETIRMVKKEADCCTDSCHTGHLQSTLQEPIEV-----SSSNEDNSHDTGDIDDP 55
Query: 61 INGDASKQLVLYDPTANGTSEIEPVPESFQYNRAPFGRYSGPNTQSRVLPSVGAFTVQCA 120
D+SKQLVLYDP NG +IEPVP+ Q+ R PF RYS PN SRVLPSVG FTVQCA
Sbjct: 56 SIEDSSKQLVLYDPVTNGAGQIEPVPQPIQFQR-PFRRYSDPNVPSRVLPSVGTFTVQCA 114
Query: 121 DCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRLWAIDKPN 180
CFKWRLIPTK+KYEE+REH+LE PF CE AR WRPD+SCDDPTDI+QDGSRLWAIDKPN
Sbjct: 115 KCFKWRLIPTKKKYEELREHILEEPFFCETARGWRPDISCDDPTDITQDGSRLWAIDKPN 174
Query: 181 IAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQ 240
IAQPPPGWQRLLRIRGEGS+KFADVYY++PSGK+LRSMVE+QKY +EHPEY GV +SQ
Sbjct: 175 IAQPPPGWQRLLRIRGEGSSKFADVYYQSPSGKRLRSMVEVQKYLIEHPEYMTYGVTLSQ 234
Query: 241 FSFQIPKPLQENYVRKRVPKAHTSHDTPKALEPRAVSPLSWVSPDNFTDLQLGRPALPAP 300
FSFQIPKPLQENYVRKR P S D + L+P +FT+LQLGRPA +P
Sbjct: 235 FSFQIPKPLQENYVRKRRPSISASCDYTRHLQP---------GEGDFTELQLGRPA--SP 283
Query: 301 PVEAPISDPNPRPAKQARRAPKQMY-SGSPISSDHKFRAEE 340
+ P+ K+A KQ Y + +P+ + + EE
Sbjct: 284 SFDRPVK-------KKAGTQSKQDYRTANPVCNQDGAKVEE 317
>gi|356520885|ref|XP_003529090.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like
[Glycine max]
Length = 309
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 180/298 (60%), Positives = 210/298 (70%), Gaps = 16/298 (5%)
Query: 4 HSGKASVRVEKEANEFLGSSLLSNLDESLHEPIDVPSSTSSSASEGQSDETVEGDDQING 63
H GK S+ + E + GSSL S SL +PIDV SS+ + +D N
Sbjct: 2 HRGKFSLTPKNEVKDLTGSSLTSYKHSSLLDPIDVSSSSD------------DENDLPND 49
Query: 64 DASKQLVLYDPTANGTSEIEPVPESFQYNRAPFGRYSGPNTQSRVLPSVGAFTVQCADCF 123
D S QLVLYDP ANG + IE P+ Q R ++ RVLPSVGAFTVQCA CF
Sbjct: 50 DVSNQLVLYDPVANGNNAIELAPDPLQCEHPLLPRSKPSHSVPRVLPSVGAFTVQCASCF 109
Query: 124 KWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRLWAIDKPNIAQ 183
KWRLIPTKEKYEEIREH+LE PF C+KAREWRP VSCDDP DISQDGSR+WAIDKPNIAQ
Sbjct: 110 KWRLIPTKEKYEEIREHILEQPFVCQKAREWRPHVSCDDPEDISQDGSRVWAIDKPNIAQ 169
Query: 184 PPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PP GW+RLLRIR EGS+KFAD+YY APSGK+LRSMVEIQK+ +EHPEY R GV +SQFSF
Sbjct: 170 PPAGWERLLRIRAEGSSKFADIYYIAPSGKRLRSMVEIQKFLMEHPEYTRDGVTLSQFSF 229
Query: 244 QIPKPLQENYVRKRVPKAHTSHDTPKALEPRAVSPLSWVSPDNFTDLQLGRPALPAPP 301
QIP+PLQENYVRKR + +S++ + +E VSPL+WV P+ R LPAPP
Sbjct: 230 QIPRPLQENYVRKRPARLTSSYEVSEPVEHEQVSPLAWVDPEGHG----RRLGLPAPP 283
>gi|449465348|ref|XP_004150390.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like
[Cucumis sativus]
Length = 342
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 174/273 (63%), Positives = 206/273 (75%), Gaps = 2/273 (0%)
Query: 60 QINGDASKQLVLYDPTANGTSEIEPVPESFQYNRAPFGRYSGPNTQSRVLPSVGAFTVQC 119
Q N + S++LV+YDP+A+ +PV + +P + PN+ SRVLPSVGAFTVQC
Sbjct: 55 QSNDNPSRELVIYDPSADDGHANDPVSTPVKQQPSPVLGHLTPNS-SRVLPSVGAFTVQC 113
Query: 120 ADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRLWAIDKP 179
A CFKWRLIPTKEKYEEIREH+LE PF CE AR WRPD+SCDDP DI+QDGSRLWAIDKP
Sbjct: 114 AGCFKWRLIPTKEKYEEIREHLLEKPFYCETARGWRPDISCDDPADITQDGSRLWAIDKP 173
Query: 180 NIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMS 239
NIAQPPPGWQRLL IRGEGSTKFADVYY APSGKKLRSMV+IQKY +EHPEY GV M+
Sbjct: 174 NIAQPPPGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMT 233
Query: 240 QFSFQIPKPLQENYVRKRVPKAHTSHDTPKALEPRAVSPLSWVSPDNFTDLQLGRPALPA 299
+FSFQIPKPL+E+YVRKR P + S D K LE V P+SW PD+ T LQLG+P L
Sbjct: 234 RFSFQIPKPLREDYVRKRRPNMNASCDASK-LESGEVRPISWARPDDSTALQLGKPGLTE 292
Query: 300 PPVEAPISDPNPRPAKQARRAPKQMYSGSPISS 332
+P+++P RPAK+ +RA Q S ++S
Sbjct: 293 LLSTSPVNNPVTRPAKKVKRALAQEMRRSSLTS 325
>gi|356496785|ref|XP_003517246.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like
[Glycine max]
Length = 312
Score = 344 bits (882), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 180/319 (56%), Positives = 217/319 (68%), Gaps = 22/319 (6%)
Query: 4 HSGKASVRVEKEANEFLGSSLLSNLDESLHEPIDVPSSTSSSASEGQSDETVEGDDQING 63
+ GK S+ + E + GSS S S +PIDV SS+ DE +D N
Sbjct: 2 YHGKFSLTPKNEVKDLTGSSFPSYKHSSQLDPIDVSSSSD--------DE----NDLPND 49
Query: 64 DASKQLVLYDPTANGTSEIEPVPESFQYNRAPFGRYSGPNTQSRVLPSVGAFTVQCADCF 123
D S QLVLYDP ANG + IE P+ Q R ++ R LPSVG FTVQCA C
Sbjct: 50 DVSNQLVLYDPVANGNNAIELAPDPLQCEPPLLPRSKPSHSVPRALPSVGVFTVQCASCL 109
Query: 124 KWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRLWAIDKPNIAQ 183
KWRLIPTKEKYEEIREH++E PF C+KAREWRPDVSCDDP DISQDGSR+WAIDKPNIAQ
Sbjct: 110 KWRLIPTKEKYEEIREHIIEQPFVCQKAREWRPDVSCDDPEDISQDGSRVWAIDKPNIAQ 169
Query: 184 PPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PP GW+RLLRIR EGS+KFAD+YY APSGK+LRSMVE+QK+ +EHPEY R GV +SQFSF
Sbjct: 170 PPAGWERLLRIRAEGSSKFADIYYIAPSGKRLRSMVEVQKFLMEHPEYTRDGVTLSQFSF 229
Query: 244 QIPKPLQENYVRKRVPKAHTSHDTPKALEPRAVSPLSWVSPDNFTDLQLGRPALPAPP-- 301
QIP+PLQENYVRKR + +S++ + +E + VSPL+WV P+ GR LP PP
Sbjct: 230 QIPRPLQENYVRKRSARLTSSYEVSEPVEHQQVSPLAWVDPEGCG----GRLGLPPPPFM 285
Query: 302 ----VEAPISDPNPRPAKQ 316
++ I+ RPAK+
Sbjct: 286 GSHDLDTTINMSISRPAKR 304
>gi|255570564|ref|XP_002526239.1| DNA binding protein, putative [Ricinus communis]
gi|223534433|gb|EEF36136.1| DNA binding protein, putative [Ricinus communis]
Length = 271
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/273 (64%), Positives = 207/273 (75%), Gaps = 6/273 (2%)
Query: 1 MQSHSGKASVRVEKEANEFLGSSLLSNLDESLHEPIDVPSSTSSSASEGQSDETVEGDDQ 60
MQS G+AS+ ++KEA ++ SS + H + P SSS+ E S ET + ++Q
Sbjct: 1 MQSPPGEASLSIKKEAIDYSSSSFAA------HSNLQSPVEVSSSSEEDNSHETEDANEQ 54
Query: 61 INGDASKQLVLYDPTANGTSEIEPVPESFQYNRAPFGRYSGPNTQSRVLPSVGAFTVQCA 120
+ASKQ+VLYDP ANG+ +IE VP+ Q P R G SRVLPSVGAFTVQCA
Sbjct: 55 STENASKQIVLYDPVANGSGQIEIVPQPLQCRPHPSARRPGFLMHSRVLPSVGAFTVQCA 114
Query: 121 DCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRLWAIDKPN 180
CFKWRLIPTKEKYEEIREH+LE PF CE AREWRPD+SC+DP DISQDGSRLWAIDKPN
Sbjct: 115 KCFKWRLIPTKEKYEEIREHILEQPFYCETAREWRPDISCNDPADISQDGSRLWAIDKPN 174
Query: 181 IAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQ 240
IAQPP GWQRLLRIRGEGS+KFADVYY+APSGK+LRSMVEI++Y + +PEY + GVK+SQ
Sbjct: 175 IAQPPRGWQRLLRIRGEGSSKFADVYYQAPSGKRLRSMVEIERYLMANPEYVQNGVKLSQ 234
Query: 241 FSFQIPKPLQENYVRKRVPKAHTSHDTPKALEP 273
FSFQIP+PLQENYVRKR + S D + LEP
Sbjct: 235 FSFQIPRPLQENYVRKRPARLTASCDNIRPLEP 267
>gi|449508228|ref|XP_004163256.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like,
partial [Cucumis sativus]
Length = 268
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 148/210 (70%), Positives = 169/210 (80%), Gaps = 1/210 (0%)
Query: 60 QINGDASKQLVLYDPTANGTSEIEPVPESFQYNRAPFGRYSGPNTQSRVLPSVGAFTVQC 119
Q N + S++LV+YDP+A+ +PV + +P + PN+ SRVLPSVGAFTVQC
Sbjct: 55 QSNDNPSRELVIYDPSADDGHANDPVSTPVKQQPSPVLGHLTPNS-SRVLPSVGAFTVQC 113
Query: 120 ADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRLWAIDKP 179
A CFKWRLIPTKEKYEEIREH+LE PF CE AR WRPD+SCDDP DI+QDGSRLWAIDKP
Sbjct: 114 AGCFKWRLIPTKEKYEEIREHLLEKPFYCETARGWRPDISCDDPADITQDGSRLWAIDKP 173
Query: 180 NIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMS 239
NIAQPPPGWQRLL IRGEGSTKFADVYY APSGKKLRSMV+IQKY +EHPEY GV M+
Sbjct: 174 NIAQPPPGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMT 233
Query: 240 QFSFQIPKPLQENYVRKRVPKAHTSHDTPK 269
+FSFQIPKPL+E+YVRKR P + S D K
Sbjct: 234 RFSFQIPKPLREDYVRKRRPNMNASCDASK 263
>gi|297805084|ref|XP_002870426.1| hypothetical protein ARALYDRAFT_915661 [Arabidopsis lyrata subsp.
lyrata]
gi|297316262|gb|EFH46685.1| hypothetical protein ARALYDRAFT_915661 [Arabidopsis lyrata subsp.
lyrata]
Length = 278
Score = 286 bits (733), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 141/261 (54%), Positives = 184/261 (70%), Gaps = 18/261 (6%)
Query: 68 QLVLYDPTANGTSEIEPVPESFQYNRAPFGRYSGPNTQSRVLPSVGAFTVQCADCFKWRL 127
QLV+YD N T E E +P Q P+++++ PS+GAFTVQCA CFKWRL
Sbjct: 30 QLVVYDLKGNDTEE-EVLPIQSQL----------PSSRTQC-PSIGAFTVQCASCFKWRL 77
Query: 128 IPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRLWAIDKPNIAQPPPG 187
+P+ +KYEEIRE +LENPF CE AREW+PD+SCD P DI QDG+R+WAIDKPNI++PP G
Sbjct: 78 MPSMQKYEEIREQLLENPFFCETAREWKPDISCDVPADIYQDGTRVWAIDKPNISRPPAG 137
Query: 188 WQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQIPK 247
WQRLLRIRGEG T+FADVYY APSGKKLRS VE+QKY ++PEY GVK+SQFSFQIPK
Sbjct: 138 WQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNPEYMSEGVKLSQFSFQIPK 197
Query: 248 PLQENYVRKRVPKAHTSHDTPKALEPRAVSPLSWVSPDNFTDLQLGRPALPAPPVEAPIS 307
PLQ++YVRKR + S D + +PL+W+SPD+ LQLG P E+ +
Sbjct: 198 PLQDDYVRKRPARLVDSIDNTNTHVAKEANPLAWISPDDHIALQLG------TPTESGLY 251
Query: 308 DPNPRPAKQARRAPKQMYSGS 328
+ + +P+K+ + + ++ +
Sbjct: 252 NSHDQPSKKRKTSKLSIFGAN 272
>gi|15238478|ref|NP_198383.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana]
gi|42573507|ref|NP_974850.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana]
gi|334188017|ref|NP_001190421.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana]
gi|75154716|sp|Q8LA53.1|MBD2_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 2;
Short=AtMBD2; Short=MBD02; AltName:
Full=Methyl-CpG-binding protein MBD2
gi|21593605|gb|AAM65572.1| unknown [Arabidopsis thaliana]
gi|107738396|gb|ABF83690.1| At5g35330 [Arabidopsis thaliana]
gi|332006569|gb|AED93952.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana]
gi|332006570|gb|AED93953.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana]
gi|332006571|gb|AED93954.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana]
Length = 272
Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 139/258 (53%), Positives = 179/258 (69%), Gaps = 17/258 (6%)
Query: 68 QLVLYDPTANGTSEIEPVPESFQYNRAPFGRYSGPNTQSRVLPSVGAFTVQCADCFKWRL 127
QLV+YD N +E E +P Q P + PS+GAFTVQCA CFKWRL
Sbjct: 23 QLVVYDLKGNDDTEEEVLPVQSQ-----------PLSSRTQCPSIGAFTVQCASCFKWRL 71
Query: 128 IPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRLWAIDKPNIAQPPPG 187
+P+ +KYEEIRE +LENPF C+ AREW+PD+SCD P DI QDG+RLWAIDKPNI++PP G
Sbjct: 72 MPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQDGTRLWAIDKPNISRPPAG 131
Query: 188 WQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQIPK 247
WQRLLRIRGEG T+FADVYY APSGKKLRS VE+QKY ++ EY GVK+SQFSFQIPK
Sbjct: 132 WQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNSEYIGEGVKLSQFSFQIPK 191
Query: 248 PLQENYVRKRVPKAHTSHDTPKALEPRAVSPLSWVSPDNFTDLQLGRPALPAPPVEAPIS 307
PLQ++YVRKR + S D + +PL+W+SPD+ LQLG P E+ ++
Sbjct: 192 PLQDDYVRKRPARLLDSIDNTNTPVAKEANPLAWISPDDHISLQLG------TPTESGLN 245
Query: 308 DPNPRPAKQARRAPKQMY 325
+ + +P+K+ + + ++
Sbjct: 246 NSHYQPSKKKKTSTLSIF 263
>gi|10178093|dbj|BAB11480.1| unnamed protein product [Arabidopsis thaliana]
Length = 270
Score = 286 bits (732), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 139/258 (53%), Positives = 179/258 (69%), Gaps = 17/258 (6%)
Query: 68 QLVLYDPTANGTSEIEPVPESFQYNRAPFGRYSGPNTQSRVLPSVGAFTVQCADCFKWRL 127
QLV+YD N +E E +P Q P + PS+GAFTVQCA CFKWRL
Sbjct: 21 QLVVYDLKGNDDTEEEVLPVQSQ-----------PLSSRTQCPSIGAFTVQCASCFKWRL 69
Query: 128 IPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRLWAIDKPNIAQPPPG 187
+P+ +KYEEIRE +LENPF C+ AREW+PD+SCD P DI QDG+RLWAIDKPNI++PP G
Sbjct: 70 MPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQDGTRLWAIDKPNISRPPAG 129
Query: 188 WQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQIPK 247
WQRLLRIRGEG T+FADVYY APSGKKLRS VE+QKY ++ EY GVK+SQFSFQIPK
Sbjct: 130 WQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNSEYIGEGVKLSQFSFQIPK 189
Query: 248 PLQENYVRKRVPKAHTSHDTPKALEPRAVSPLSWVSPDNFTDLQLGRPALPAPPVEAPIS 307
PLQ++YVRKR + S D + +PL+W+SPD+ LQLG P E+ ++
Sbjct: 190 PLQDDYVRKRPARLLDSIDNTNTPVAKEANPLAWISPDDHISLQLG------TPTESGLN 243
Query: 308 DPNPRPAKQARRAPKQMY 325
+ + +P+K+ + + ++
Sbjct: 244 NSHYQPSKKKKTSTLSIF 261
>gi|28973626|gb|AAO64137.1| unknown protein [Arabidopsis thaliana]
Length = 257
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 139/252 (55%), Positives = 177/252 (70%), Gaps = 17/252 (6%)
Query: 68 QLVLYDPTANGTSEIEPVPESFQYNRAPFGRYSGPNTQSRVLPSVGAFTVQCADCFKWRL 127
QLV+YD N +E E +P Q P + PS+GAFTVQCA CFKWRL
Sbjct: 23 QLVVYDLKGNDDTEEEVLPVQSQ-----------PLSSRTQCPSIGAFTVQCASCFKWRL 71
Query: 128 IPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRLWAIDKPNIAQPPPG 187
+P+ +KYEEIRE +LENPF C+ AREW+PD+SCD P DI QDG+RLWAIDKPNI++PP G
Sbjct: 72 MPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQDGTRLWAIDKPNISRPPAG 131
Query: 188 WQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQIPK 247
WQRLLRIRGEG T+FADVYY APSGKKLRS VE+QKY ++ EY GVK+SQFSFQIPK
Sbjct: 132 WQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNSEYIGEGVKLSQFSFQIPK 191
Query: 248 PLQENYVRKRVPKAHTSHDTPKALEPRAVSPLSWVSPDNFTDLQLGRPALPAPPVEAPIS 307
PLQ++YVRKR + S D + +PL+W+SPD+ LQLG P E+ ++
Sbjct: 192 PLQDDYVRKRPARLLDSIDNTNTPVAKEANPLAWISPDDHISLQLG------TPTESGLN 245
Query: 308 DPNPRPAKQARR 319
+ + +P+K+ ++
Sbjct: 246 NSHYQPSKKKKK 257
>gi|110736706|dbj|BAF00316.1| hypothetical protein [Arabidopsis thaliana]
Length = 252
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 136/229 (59%), Positives = 164/229 (71%), Gaps = 11/229 (4%)
Query: 68 QLVLYDPTANGTSEIEPVPESFQYNRAPFGRYSGPNTQSRVLPSVGAFTVQCADCFKWRL 127
QLV+YD N +E E +P Q P + PS+GAFTVQCA CFKWRL
Sbjct: 23 QLVVYDLKGNDDTEEEVLPVQSQ-----------PLSSRTQCPSIGAFTVQCASCFKWRL 71
Query: 128 IPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRLWAIDKPNIAQPPPG 187
+P+ +KYEEIRE +LENPF C+ AREW+PD+SCD P DI QDG+RLWAIDKPNI++PP G
Sbjct: 72 MPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQDGTRLWAIDKPNISRPPAG 131
Query: 188 WQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQIPK 247
WQRLLRIRGEG T+FADVYY APSGKKLRS VE+QKY ++ EY GVK+SQFSFQIPK
Sbjct: 132 WQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNSEYIGEGVKLSQFSFQIPK 191
Query: 248 PLQENYVRKRVPKAHTSHDTPKALEPRAVSPLSWVSPDNFTDLQLGRPA 296
PLQ++YVRKR + S D + +PL+W+SPD+ LQLG P
Sbjct: 192 PLQDDYVRKRPARLLDSIDNTNTPVAKEANPLAWISPDDHISLQLGTPT 240
>gi|115479913|ref|NP_001063550.1| Os09g0494300 [Oryza sativa Japonica Group]
gi|113631783|dbj|BAF25464.1| Os09g0494300 [Oryza sativa Japonica Group]
gi|215715253|dbj|BAG95004.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 315
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/248 (55%), Positives = 180/248 (72%), Gaps = 14/248 (5%)
Query: 55 VEGDDQINGDASKQLVLYDP--TANGTSEIEPVPESFQYNRAPFGRYSGPNTQSRVLPSV 112
++ D+ + AS Q+VL++P A G E+ N +P + S N +R +PS+
Sbjct: 25 LDNDEFSSESASNQMVLFNPETVAKGQDEL-------GENHSPSLQKSA-NNPNRGMPSI 76
Query: 113 GAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSR 172
GAFTVQCA CFKWRLIPTKEKYEEIRE +++ PF CE+AREWRPDV+C+DP DISQDGSR
Sbjct: 77 GAFTVQCAKCFKWRLIPTKEKYEEIRECIIQEPFECERAREWRPDVTCNDPEDISQDGSR 136
Query: 173 LWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYA 232
LWAIDKPNIA PPPGW+R +RIRGEG TKFADVYY +P+G+KLRS+VEI +Y LE+P+Y
Sbjct: 137 LWAIDKPNIALPPPGWERQIRIRGEGGTKFADVYYTSPTGRKLRSLVEIDRYLLENPDYV 196
Query: 233 RAGVKMSQFSFQIPKPLQENYVRKR----VPKAHTSHDTPKALEPRAVSPLSWVSPDNFT 288
GV ++QFSFQIP+PL+++YV+KR P S T K+++P VSP++W +P
Sbjct: 197 AQGVTLTQFSFQIPRPLRQDYVKKRPKIVNPNDEASVVTTKSVKPEEVSPIAWAAPSVHQ 256
Query: 289 DLQLGRPA 296
+ + G A
Sbjct: 257 EGEAGERA 264
>gi|125564222|gb|EAZ09602.1| hypothetical protein OsI_31886 [Oryza sativa Indica Group]
Length = 383
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/248 (55%), Positives = 181/248 (72%), Gaps = 14/248 (5%)
Query: 55 VEGDDQINGDASKQLVLYDP--TANGTSEIEPVPESFQYNRAPFGRYSGPNTQSRVLPSV 112
++ D+ + AS Q+VL++P A G E+ N +P + S N +R +PS+
Sbjct: 93 LDNDEFSSESASNQMVLFNPETVAKGQDEL-------GENHSPSLQKSA-NNPNRGMPSI 144
Query: 113 GAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSR 172
GAFTVQCA CFKWRLIPTKEKYEEIRE +++ PF CE+AREWRPDV+C+DP DISQDGSR
Sbjct: 145 GAFTVQCAKCFKWRLIPTKEKYEEIRECIIQEPFECERAREWRPDVTCNDPEDISQDGSR 204
Query: 173 LWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYA 232
LWAIDKPNIA PPPGW+R +RIRGEG TKFADVYY +P+G+KLRS+VEI +Y LE+P+Y
Sbjct: 205 LWAIDKPNIALPPPGWERQIRIRGEGGTKFADVYYTSPTGRKLRSLVEIDRYLLENPDYV 264
Query: 233 RAGVKMSQFSFQIPKPLQENYVRKR----VPKAHTSHDTPKALEPRAVSPLSWVSPDNFT 288
GV ++QFSFQIP+PL+++YV+KR P S T K+++P VSP++W +P
Sbjct: 265 AQGVTLTQFSFQIPRPLRQDYVKKRPKIVNPNDEASVVTTKSVKPEEVSPIAWAAPSVHQ 324
Query: 289 DLQLGRPA 296
+ + G+ A
Sbjct: 325 EGEAGKRA 332
>gi|357159152|ref|XP_003578356.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like
[Brachypodium distachyon]
Length = 316
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/232 (57%), Positives = 168/232 (72%), Gaps = 11/232 (4%)
Query: 87 ESFQYNRAPFGRYSGP-NTQSRVLPSVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENP 145
+ F N +P + S P NT +R P +GAFT+QCA CFKWRL+PTKEKYEEIREH+++ P
Sbjct: 52 DEFGENHSPSLQQSTPSNTPNRGSPCIGAFTIQCAKCFKWRLVPTKEKYEEIREHIIQEP 111
Query: 146 FTCEKAREWRPDVSCDDPTDISQDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADV 205
F CE+AREW+PDV+CDDP DISQDGSRLWAIDKPNIA+ P GW+R +RIRGEG TKFADV
Sbjct: 112 FECERAREWKPDVTCDDPEDISQDGSRLWAIDKPNIARAPNGWERQIRIRGEGGTKFADV 171
Query: 206 YYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQIPKPLQENYVR--KRVPKAHT 263
YY +PSG+KLRS VE+ KY E+PEY GVK +QFSFQIP+PL+ENYV+ K+ PK +
Sbjct: 172 YYTSPSGRKLRSQVEVDKYLKENPEYGEKGVKSTQFSFQIPRPLRENYVKHVKKRPKLAS 231
Query: 264 SHD-----TPKALEPRAVSPLSWVSP---DNFTDLQLGRPALPAPPVEAPIS 307
D T K L+P +P+SW +P + Q+ A P VEA ++
Sbjct: 232 PSDEANIITSKPLQPVEANPISWAAPPTHEGQASEQVSHAADPFGSVEAELT 283
>gi|134285526|gb|ABO69708.1| MBD2 [Triticum aestivum]
Length = 313
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 121/204 (59%), Positives = 157/204 (76%), Gaps = 1/204 (0%)
Query: 82 IEPVPESFQYNRAPFGRYSGPNTQSRVLPSVGAFTVQCADCFKWRLIPTKEKYEEIREHV 141
++ V + F + +P + + N R P +GAFT+QCA CFKWRLIPTKEKYEEIREH+
Sbjct: 47 VDKVQDEFGEDSSPLQQSAASNVSYRGSPCIGAFTIQCARCFKWRLIPTKEKYEEIREHI 106
Query: 142 LENPFTCEKAREWRPDVSCDDPTDISQDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTK 201
++ PF CE+AREW+PDV+CDD DISQDGSRLWAIDKPNIAQPP GW+R +RIRG G TK
Sbjct: 107 IQEPFDCERAREWKPDVTCDDQEDISQDGSRLWAIDKPNIAQPPAGWERQIRIRGGGGTK 166
Query: 202 FADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQIPKPLQENYVRKRVPKA 261
FADVYY +P+ +KLRS+VE+ +Y E+PEY GV ++QFSFQIP+PL++NYV+KR A
Sbjct: 167 FADVYYTSPTSRKLRSLVEVDRYLQENPEYGAQGVTLAQFSFQIPRPLRQNYVKKRPKNA 226
Query: 262 HTSHD-TPKALEPRAVSPLSWVSP 284
S + T K ++P V+P+SW +P
Sbjct: 227 SPSDEATTKPVQPVEVNPISWAAP 250
>gi|215741526|dbj|BAG98021.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 245
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 133/242 (54%), Positives = 172/242 (71%), Gaps = 11/242 (4%)
Query: 39 PSSTSSSASEGQSDETVEGDDQINGDASKQLVLYDP--TANGTSEIEPVPESFQYNRAPF 96
PS S ++ D+ + AS Q+VL++P A G E+ N +P
Sbjct: 9 PSKKSRIMLSDTDGHQLDNDEFSSESASNQMVLFNPETVAKGQDEL-------GENHSPS 61
Query: 97 GRYSGPNTQSRVLPSVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRP 156
+ S N +R +PS+GAFTVQCA CFKWRLIPTKEKYEEIRE +++ PF CE+AREWRP
Sbjct: 62 LQKSA-NNPNRGMPSIGAFTVQCAKCFKWRLIPTKEKYEEIRECIIQEPFECERAREWRP 120
Query: 157 DVSCDDPTDISQDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLR 216
DV+C+DP DISQDGSRLWAIDKPNIA PPPGW+R +RIRGEG TKFADVYY +P+G+KLR
Sbjct: 121 DVTCNDPEDISQDGSRLWAIDKPNIALPPPGWERQIRIRGEGGTKFADVYYTSPTGRKLR 180
Query: 217 SMVEIQKYFLEHPEYARAGVKMSQFSFQIPKPLQENYVRKRVPKAHTSHDTPKALEPRAV 276
S+VEI +Y LE+P+Y GV ++QFSFQIP+PL+++YV+KR PK +D + ++V
Sbjct: 181 SLVEIDRYLLENPDYVAQGVTLTQFSFQIPRPLRQDYVKKR-PKIVNPNDEASVVTTKSV 239
Query: 277 SP 278
P
Sbjct: 240 KP 241
>gi|162461941|ref|NP_001105176.1| uncharacterized protein LOC542070 [Zea mays]
gi|13936312|gb|AAK40309.1| putative methyl-binding domain protein MBD108 [Zea mays]
gi|194698040|gb|ACF83104.1| unknown [Zea mays]
gi|194706798|gb|ACF87483.1| unknown [Zea mays]
gi|414886083|tpg|DAA62097.1| TPA: hypothetical protein ZEAMMB73_724313 [Zea mays]
gi|414886084|tpg|DAA62098.1| TPA: hypothetical protein ZEAMMB73_724313 [Zea mays]
gi|414886085|tpg|DAA62099.1| TPA: hypothetical protein ZEAMMB73_724313 [Zea mays]
Length = 297
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 115/182 (63%), Positives = 149/182 (81%), Gaps = 6/182 (3%)
Query: 108 VLPSVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDIS 167
+ PS+GAFTVQCA CFKWRLIPTKEKYEEIRE +++ PF C++AREWRPD++C+DP DIS
Sbjct: 65 ISPSIGAFTVQCAKCFKWRLIPTKEKYEEIRERIIQEPFVCKRAREWRPDITCNDPEDIS 124
Query: 168 QDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLE 227
QDGSRLWAIDKPNIAQPP GW+R +RIRGEG TKFADVYY +P+G+KLRS+VE+ ++ E
Sbjct: 125 QDGSRLWAIDKPNIAQPPHGWERQIRIRGEGGTKFADVYYTSPTGRKLRSLVEVDRFLQE 184
Query: 228 HPEYARAGVKMSQFSFQIPKPLQENYVRKRVPKAHTSHD-----TPKALEPRAVSPLSWV 282
+PE+ GV ++QFSFQIP+PL+++YV+K+ PK + D T K+ EP V+P++W
Sbjct: 185 NPEHVAQGVTLAQFSFQIPRPLRQDYVKKK-PKLINASDEASTITSKSSEPEEVNPIAWA 243
Query: 283 SP 284
P
Sbjct: 244 VP 245
>gi|357123643|ref|XP_003563518.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like
[Brachypodium distachyon]
Length = 375
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 132/241 (54%), Positives = 166/241 (68%), Gaps = 13/241 (5%)
Query: 62 NGDASKQLVLYDPTA----NGTSEIEPVPESFQYN-RAPFGRYSGPNTQSRVLPSVGAFT 116
+ D SKQLVLY+ G EP+ +S R P RY + +LPS+GA+T
Sbjct: 40 DDDDSKQLVLYNAEIAQDKEGVEVTEPIHQSSPLQQRFPKARYG----HASILPSIGAYT 95
Query: 117 VQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRLWAI 176
VQCADCFKWR++PTKEKYEE+RE + E F C +A EW +SC+DP D+SQDGSR+WAI
Sbjct: 96 VQCADCFKWRIVPTKEKYEELRETICEELFVCARACEWNRVLSCNDPEDMSQDGSRVWAI 155
Query: 177 DKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGV 236
DKP+IAQPPPGW R +RIRGEGS+KFADVYY +PSGKKLRS+VEI +Y E+P Y + G
Sbjct: 156 DKPSIAQPPPGWDRDVRIRGEGSSKFADVYYTSPSGKKLRSLVEIGRYLAENPHYIQQGA 215
Query: 237 KMSQFSFQIPKPLQENYVRKRVPKAHTSHDTPKALEPRAVSPLSWVSPDNFTD-LQLGRP 295
+SQFSF IPKPLQE+YV+KR H +H P+ E +PL W +P + L+LG
Sbjct: 216 SLSQFSFAIPKPLQEDYVKKRT---HAAHGLPELPEVVEANPLCWAAPPTRKELLKLGTS 272
Query: 296 A 296
A
Sbjct: 273 A 273
>gi|297606456|ref|NP_001058488.2| Os06g0702100 [Oryza sativa Japonica Group]
gi|255677371|dbj|BAF20402.2| Os06g0702100 [Oryza sativa Japonica Group]
Length = 373
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/249 (52%), Positives = 169/249 (67%), Gaps = 15/249 (6%)
Query: 52 DETVEGDDQINGD-----ASKQLVLYDP--TANGTSEIE---PVPESFQYNRAPFGRYSG 101
D+ +GD I+ D SK LV+Y+P T + E+E P+ N+ G
Sbjct: 53 DDDSDGDANIHKDYSMEDTSKHLVMYNPEITYDKQGEVEVTEPIDNYTSLNQRYMKPRHG 112
Query: 102 PNTQSRVLPSVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCD 161
NT VLPS+GA+TVQCA CFKWR+IPTKEKYEEIRE++ ++ F CE+AREW +SC
Sbjct: 113 YNT---VLPSIGAYTVQCAHCFKWRIIPTKEKYEEIRENICQDVFVCERAREWNRVISCV 169
Query: 162 DPTDISQDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEI 221
DP DISQDGSR+WAIDK +I+Q PPGW R +RIRGEG +KFADVYY +P+GKKLRS+VE+
Sbjct: 170 DPEDISQDGSRVWAIDKASISQTPPGWDREVRIRGEGCSKFADVYYTSPTGKKLRSLVEV 229
Query: 222 QKYFLEHPEYARAGVKMSQFSFQIPKPLQENYVRKRVPKAHTSHDTPKALEPRAVSPLSW 281
+Y E+P Y R GV ++QFSF PKPLQE+YVRK A + + P+ LE V PL W
Sbjct: 230 GRYLAENPHYIRQGVNLTQFSFATPKPLQEDYVRKHTYAA--TPELPELLETAQVDPLCW 287
Query: 282 VSPDNFTDL 290
+P ++L
Sbjct: 288 AAPPTRSEL 296
>gi|125598409|gb|EAZ38189.1| hypothetical protein OsJ_22540 [Oryza sativa Japonica Group]
Length = 359
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/249 (52%), Positives = 169/249 (67%), Gaps = 15/249 (6%)
Query: 52 DETVEGDDQINGD-----ASKQLVLYDP--TANGTSEIE---PVPESFQYNRAPFGRYSG 101
D+ +GD I+ D SK LV+Y+P T + E+E P+ N+ G
Sbjct: 39 DDDSDGDANIHKDYSMEDTSKHLVMYNPEITYDKQGEVEVTEPIDNYTSLNQRYMKPRHG 98
Query: 102 PNTQSRVLPSVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCD 161
NT VLPS+GA+TVQCA CFKWR+IPTKEKYEEIRE++ ++ F CE+AREW +SC
Sbjct: 99 YNT---VLPSIGAYTVQCAHCFKWRIIPTKEKYEEIRENICQDVFVCERAREWNRVISCV 155
Query: 162 DPTDISQDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEI 221
DP DISQDGSR+WAIDK +I+Q PPGW R +RIRGEG +KFADVYY +P+GKKLRS+VE+
Sbjct: 156 DPEDISQDGSRVWAIDKASISQTPPGWDREVRIRGEGCSKFADVYYTSPTGKKLRSLVEV 215
Query: 222 QKYFLEHPEYARAGVKMSQFSFQIPKPLQENYVRKRVPKAHTSHDTPKALEPRAVSPLSW 281
+Y E+P Y R GV ++QFSF PKPLQE+YVRK A + + P+ LE V PL W
Sbjct: 216 GRYLAENPHYIRQGVNLTQFSFATPKPLQEDYVRKHTYAA--TPELPELLETAQVDPLCW 273
Query: 282 VSPDNFTDL 290
+P ++L
Sbjct: 274 AAPPTRSEL 282
>gi|218198840|gb|EEC81267.1| hypothetical protein OsI_24363 [Oryza sativa Indica Group]
Length = 334
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/243 (53%), Positives = 166/243 (68%), Gaps = 15/243 (6%)
Query: 52 DETVEGDDQINGD-----ASKQLVLYDP--TANGTSEIE---PVPESFQYNRAPFGRYSG 101
D+ +GD I+ D SK LV+Y+P T + E+E P+ N+ G
Sbjct: 28 DDDSDGDANIHKDYSMEDTSKHLVMYNPEITYDKQGEVEVTEPIDNYTSLNQRYMKPRHG 87
Query: 102 PNTQSRVLPSVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCD 161
NT VLPS+GA+TVQC CFKWR+IPTKEKYEEIRE++ ++ F CE+AREW +SC
Sbjct: 88 YNT---VLPSIGAYTVQCTHCFKWRIIPTKEKYEEIRENICQDVFVCERAREWNRVISCV 144
Query: 162 DPTDISQDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEI 221
DP DISQDGSR+WAIDK +I+Q PPGW R +RIRGEG +KFADVYY +P+GKKLRS+VE+
Sbjct: 145 DPEDISQDGSRVWAIDKASISQTPPGWDREVRIRGEGCSKFADVYYTSPTGKKLRSLVEV 204
Query: 222 QKYFLEHPEYARAGVKMSQFSFQIPKPLQENYVRKRVPKAHTSHDTPKALEPRAVSPLSW 281
+Y E+P Y R GV ++QFSF IPKPLQE+YVRK A + + P+ LE V PL W
Sbjct: 205 GRYLAENPHYIRQGVNLTQFSFAIPKPLQEDYVRKHTYAA--TPELPELLETAQVDPLCW 262
Query: 282 VSP 284
+P
Sbjct: 263 AAP 265
>gi|162462094|ref|NP_001105177.1| uncharacterized protein LOC542071 [Zea mays]
gi|13936314|gb|AAK40310.1| putative methyl-binding domain protein MBD111 [Zea mays]
gi|195635441|gb|ACG37189.1| methyl-binding domain protein MBD111 [Zea mays]
gi|223974361|gb|ACN31368.1| unknown [Zea mays]
gi|223974963|gb|ACN31669.1| unknown [Zea mays]
gi|414589848|tpg|DAA40419.1| TPA: hypothetical protein ZEAMMB73_683932 [Zea mays]
gi|414589849|tpg|DAA40420.1| TPA: hypothetical protein ZEAMMB73_683932 [Zea mays]
gi|414589850|tpg|DAA40421.1| TPA: hypothetical protein ZEAMMB73_683932 [Zea mays]
gi|414589851|tpg|DAA40422.1| TPA: hypothetical protein ZEAMMB73_683932 [Zea mays]
Length = 301
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 122/222 (54%), Positives = 158/222 (71%), Gaps = 14/222 (6%)
Query: 65 ASKQLVLYDPTANGTSEIEPVPESFQYNRAPFGRYSGPNTQSRVLPSVGAFTVQCADCFK 124
AS Q+V+++ A + E Q + G + PS+GAFTVQCA CFK
Sbjct: 36 ASNQMVVFNSEAGDKEQDELGENRLQKSIITRG----------ISPSIGAFTVQCAKCFK 85
Query: 125 WRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRLWAIDKPNIAQP 184
WRLIPTKEKYEEIRE ++E PF C++AREWRPDV+C+DP DISQDGSRLWAIDKPNIAQP
Sbjct: 86 WRLIPTKEKYEEIRERIIEEPFVCKRAREWRPDVTCNDPEDISQDGSRLWAIDKPNIAQP 145
Query: 185 PPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQ 244
P GW+R +RIRGEG TKFADVYY +P+G+KLRS+VE+ ++ E+PEY GV ++QFSFQ
Sbjct: 146 PRGWERQIRIRGEGGTKFADVYYTSPTGRKLRSLVEVDRFLQENPEYGAQGVTLAQFSFQ 205
Query: 245 IPKPLQENYVRKR----VPKAHTSHDTPKALEPRAVSPLSWV 282
IP+PL+++YV+K+ P S K+ +P V P++W
Sbjct: 206 IPRPLRQDYVKKKPKLINPSDEASMIASKSFQPEEVKPIAWA 247
>gi|414589852|tpg|DAA40423.1| TPA: hypothetical protein ZEAMMB73_683932 [Zea mays]
Length = 289
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 157/220 (71%), Gaps = 22/220 (10%)
Query: 65 ASKQLVLYDPTANGTSEIEPVPESFQYNRAPFGRYSGPNTQSRVLPSVGAFTVQCADCFK 124
AS Q+V+++ A + E Q + G + PS+GAFTVQCA CFK
Sbjct: 36 ASNQMVVFNSEAGDKEQDELGENRLQKSIITRG----------ISPSIGAFTVQCAKCFK 85
Query: 125 WRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRLWAIDKPNIAQP 184
WRLIPTKEKYEEIRE ++E PF C++AREWRPDV+C+DP DISQDGSRLWAIDKPNIAQP
Sbjct: 86 WRLIPTKEKYEEIRERIIEEPFVCKRAREWRPDVTCNDPEDISQDGSRLWAIDKPNIAQP 145
Query: 185 PPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQ 244
P GW+R +RIRGEG TKFADVYY +P+G+KLRS+VE+ ++ E+PEY GV ++QFSFQ
Sbjct: 146 PRGWERQIRIRGEGGTKFADVYYTSPTGRKLRSLVEVDRFLQENPEYGAQGVTLAQFSFQ 205
Query: 245 IPKPLQENYVRKRVPKAHTSHDTPKALEP--RAVSPLSWV 282
IP+PL+++YV+K+ PK + P A+ P++W
Sbjct: 206 IPRPLRQDYVKKK----------PKLINPSDEAMKPIAWA 235
>gi|242082197|ref|XP_002445867.1| hypothetical protein SORBIDRAFT_07g027130 [Sorghum bicolor]
gi|241942217|gb|EES15362.1| hypothetical protein SORBIDRAFT_07g027130 [Sorghum bicolor]
Length = 306
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/270 (47%), Positives = 171/270 (63%), Gaps = 18/270 (6%)
Query: 28 LDESLHEPIDVPSSTSSSASEGQSDETV-EGDDQINGDASKQLVLY--DPTANGTSE--- 81
+D + + P+ S S+ G+ +T+ + D + DAS+Q+V+Y D + G E
Sbjct: 1 MDSKPEKSMITPNENSVSSPSGKRQKTLYDKDGEQCDDASQQVVIYKNDKSDRGRDEQSA 60
Query: 82 ----IEPVPESFQYNRAPFGRYSGPNTQSRVLPSVGAFTVQCADCFKWRLIPTKEKYEEI 137
I P S + RA G + + +G F QCA C KWRL+ TKEKYEEI
Sbjct: 61 SHLPIVPAKPSKKRKRA-----LGKKRKRALGKQIGTFVSQCAKCQKWRLVSTKEKYEEI 115
Query: 138 REHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRLWAIDKPNIAQPPPGWQRLLRIRGE 197
RE LE+PF CEKAREW+PDV+CDDP+D+S+D LWAIDKPNI + P W+RL++IRGE
Sbjct: 116 REQALEDPFVCEKAREWKPDVTCDDPSDVSEDSGMLWAIDKPNIPRTPQEWERLIKIRGE 175
Query: 198 GSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQIPKPLQENYVRKR 257
GSTKFADVYY +P+G +LRS +++KY EHPEYA G+K+S FSF+ P PLQ++YVRKR
Sbjct: 176 GSTKFADVYYWSPTGTQLRSRKKLEKYLGEHPEYAAQGLKLSHFSFKSPAPLQKDYVRKR 235
Query: 258 VPKAH---TSHDTPKALEPRAVSPLSWVSP 284
+ T + K L+P V P+SW P
Sbjct: 236 SQTSQSGVTPKRSTKLLQPEEVQPISWAPP 265
>gi|53792746|dbj|BAD53782.1| methyl-binding domain protein-like [Oryza sativa Japonica Group]
Length = 399
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 133/294 (45%), Positives = 172/294 (58%), Gaps = 57/294 (19%)
Query: 52 DETVEGDDQINGD-----ASKQLVLYDP--TANGTSEIE---PVPESFQYNRAPFGRYSG 101
D+ +GD I+ D SK LV+Y+P T + E+E P+ N+ G
Sbjct: 39 DDDSDGDANIHKDYSMEDTSKHLVMYNPEITYDKQGEVEVTEPIDNYTSLNQRYMKPRHG 98
Query: 102 PNTQSRVLPSVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCD 161
NT VLPS+GA+TVQCA CFKWR+IPTKEKYEEIRE++ ++ F CE+AREW +SC
Sbjct: 99 YNT---VLPSIGAYTVQCAHCFKWRIIPTKEKYEEIRENICQDVFVCERAREWNRVISCV 155
Query: 162 DPTDISQDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADV---------------- 205
DP DISQDGSR+WAIDK +I+Q PPGW R +RIRGEG +KFADV
Sbjct: 156 DPEDISQDGSRVWAIDKASISQTPPGWDREVRIRGEGCSKFADVYVTVSFPGFAVVRDIW 215
Query: 206 ------------------------YYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQF 241
YY +P+GKKLRS+VE+ +Y E+P Y R GV ++QF
Sbjct: 216 YHIFGRFHIRISNFFLYVPNSIFMYYTSPTGKKLRSLVEVGRYLAENPHYIRQGVNLTQF 275
Query: 242 SFQIPKPLQENYVRKRVPKAHTSHDTPKALEPRAVSPLSWVSPDNFTDL--QLG 293
SF PKPLQE+YVRK A + + P+ LE V PL W +P ++L +LG
Sbjct: 276 SFATPKPLQEDYVRKHTYAA--TPELPELLETAQVDPLCWAAPPTRSELLGELG 327
>gi|242094104|ref|XP_002437542.1| hypothetical protein SORBIDRAFT_10g029100 [Sorghum bicolor]
gi|241915765|gb|EER88909.1| hypothetical protein SORBIDRAFT_10g029100 [Sorghum bicolor]
Length = 348
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 175/282 (62%), Gaps = 34/282 (12%)
Query: 64 DASKQLVLYDP--TANGTSEIEPVPESFQYNRAPFGRYSGPNTQSRVLPSVGAFTVQCAD 121
DASKQL +Y+P T + ++++ Q ++ P Y VLPS+G +TVQCA
Sbjct: 52 DASKQLAIYNPDITHDKQTDMDHYASPHQSSKKPRRGYGT------VLPSIGTYTVQCAK 105
Query: 122 CFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRLWAIDKPNI 181
C+KWR++PTKEKY+E+R + + F C +AREW ++SC + DISQDGSR+WAID+PNI
Sbjct: 106 CYKWRIVPTKEKYQELRGSISQELFVCARAREWNRELSCVELEDISQDGSRMWAIDRPNI 165
Query: 182 AQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQF 241
QPPPGW R +R+RG STKFADVYY +PSGKKLRS+VEI +Y ++P Y R GV +SQF
Sbjct: 166 VQPPPGWDREVRLRG-ASTKFADVYYTSPSGKKLRSLVEIGRYLEQNPHYIREGVNLSQF 224
Query: 242 SFQIPKPLQENYVRKRVPKAHTSHDTPKAL---EPRAVSPLSWVSPDNFTDL--QLGRPA 296
SF PKPLQE+YV+K HT D + L E V PL W P + +L +LG A
Sbjct: 225 SFATPKPLQEDYVQK-----HTFGDGHELLGLHEISQVDPLCWAGPPSRRELLGELGISA 279
Query: 297 LPAPPVEAP------------ISDPNPRPAKQARRAPKQMYS 326
L + P +S+P PA+ +R KQ+ S
Sbjct: 280 LGRVDTDQPEMSDSVSLHQLKVSEP---PAQHCKRTVKQVSS 318
>gi|242082195|ref|XP_002445866.1| hypothetical protein SORBIDRAFT_07g027120 [Sorghum bicolor]
gi|241942216|gb|EES15361.1| hypothetical protein SORBIDRAFT_07g027120 [Sorghum bicolor]
Length = 298
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/273 (48%), Positives = 169/273 (61%), Gaps = 28/273 (10%)
Query: 24 LLSNLDESLHEPIDVPSSTSSSASEGQSDETVEGDDQINGDASKQLVLY--DPTANGTSE 81
+ S + S+ PI+ +S S + + Q + + DQ + DAS+Q+V+Y D + G E
Sbjct: 1 MESKAENSMISPIE--NSVSPPSVKRQKTLSDKDSDQCD-DASQQVVIYKNDKSDRGRDE 57
Query: 82 -------IEPVPESFQYNRAPFGRYSGPNTQSRVLPSVGAFTVQCADCFKWRLIPTKEKY 134
I P S + RA G+ +GAF QCA C KWRLI TKEKY
Sbjct: 58 QSGSHLPIVPAKPSKKQKRA-LGK------------QIGAFAAQCAKCQKWRLISTKEKY 104
Query: 135 EEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRLWAIDKPNIAQPPPGWQRLLRI 194
EEIRE LE+PF CEKA EW+PDV+CDDP+D+SQD LWAIDKPNI + P W+RL++I
Sbjct: 105 EEIREQALEDPFVCEKACEWKPDVTCDDPSDVSQDNGMLWAIDKPNIPRTPQEWERLVKI 164
Query: 195 RGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQIPKPLQENYV 254
RGEGSTKFADVYY +P+G +LRS E++KY EHPE A GVK+S FSFQ P PLQ++YV
Sbjct: 165 RGEGSTKFADVYYWSPTGTQLRSSKEVEKYLEEHPECAAQGVKLSHFSFQSPAPLQKDYV 224
Query: 255 RKRVPKAH---TSHDTPKALEPRAVSPLSWVSP 284
RKR + T + L P V P+SW P
Sbjct: 225 RKRSQTSQSVVTPTRSTMLLPPEEVQPISWEPP 257
>gi|3047090|gb|AAC13602.1| T26D22.18 gene product [Arabidopsis thaliana]
Length = 151
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 86/139 (61%), Positives = 102/139 (73%), Gaps = 11/139 (7%)
Query: 68 QLVLYDPTANGTSEIEPVPESFQYNRAPFGRYSGPNTQSRVLPSVGAFTVQCADCFKWRL 127
QLV+YD N +E E +P Q P + PS+GAFTVQCA CFKWRL
Sbjct: 21 QLVVYDLKGNDDTEEEVLPVQSQ-----------PLSSRTQCPSIGAFTVQCASCFKWRL 69
Query: 128 IPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRLWAIDKPNIAQPPPG 187
+P+ +KYEEIRE +LENPF C+ AREW+PD+SCD P DI QDG+RLWAIDKPNI++PP G
Sbjct: 70 MPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQDGTRLWAIDKPNISRPPAG 129
Query: 188 WQRLLRIRGEGSTKFADVY 206
WQRLLRIRGEG T+FADVY
Sbjct: 130 WQRLLRIRGEGGTRFADVY 148
>gi|357141750|ref|XP_003572334.1| PREDICTED: uncharacterized protein LOC100823889 [Brachypodium
distachyon]
Length = 357
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 87/154 (56%), Positives = 107/154 (69%), Gaps = 4/154 (2%)
Query: 104 TQSRVLPSVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDP 163
TQ R L + ++ QC C KWR+IPTK KYEEIRE + PF+CE A EWRP V+CDDP
Sbjct: 188 TQKRRL-IIDTYSAQCNKCQKWRIIPTKRKYEEIREKLRSGPFSCEHASEWRPGVTCDDP 246
Query: 164 TDISQDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQK 223
TD SQD + WAIDKP IA+ P GW R + IR EGST+FADVYY P+GK LRS V++ +
Sbjct: 247 TDASQDDGKFWAIDKPGIARTPLGWDRTISIRSEGSTRFADVYYTTPTGKVLRSKVDVGR 306
Query: 224 YFLEHPEYARAGVKMSQFSFQIPKPLQENYVRKR 257
Y E+P+ A A + QFSF P PLQ Y++KR
Sbjct: 307 YLKENPQCAAA---IEQFSFATPVPLQWEYIKKR 337
>gi|222641845|gb|EEE69977.1| hypothetical protein OsJ_29872 [Oryza sativa Japonica Group]
Length = 533
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 113/167 (67%), Gaps = 10/167 (5%)
Query: 39 PSSTSSSASEGQSDETVEGDDQINGDASKQLVLYDP--TANGTSEIEPVPESFQYNRAPF 96
PS S ++ D+ + AS Q+VL++P A G E+ N +P
Sbjct: 375 PSKKSRIMLSDTDGHQLDNDEFSSESASNQMVLFNPETVAKGQDEL-------GENHSPS 427
Query: 97 GRYSGPNTQSRVLPSVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRP 156
+ S N +R +PS+GAFTVQCA CFKWRLIPTKEKYEEIRE +++ PF CE+AREWRP
Sbjct: 428 LQKSA-NNPNRGMPSIGAFTVQCAKCFKWRLIPTKEKYEEIRECIIQEPFECERAREWRP 486
Query: 157 DVSCDDPTDISQDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFA 203
DV+C+DP DISQDGSRLWAIDKPNIA P PGW+R +RIRGEG TK
Sbjct: 487 DVTCNDPEDISQDGSRLWAIDKPNIALPTPGWERQIRIRGEGGTKIC 533
>gi|86438778|emb|CAJ75638.1| putative methyl-binding domain (MBD108) protein [Brachypodium
sylvaticum]
Length = 171
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 85/150 (56%), Positives = 103/150 (68%), Gaps = 4/150 (2%)
Query: 104 TQSRVLPSVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDP 163
TQ R L + ++ QC C KWR+IPTK KYEEIRE + PF+CE A EW+P V+CDDP
Sbjct: 26 TQKRRL-IIDTYSAQCNKCRKWRIIPTKRKYEEIREKLRSGPFSCEHASEWKPGVTCDDP 84
Query: 164 TDISQDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQK 223
TD SQD + WAIDKP IAQ P GW R + IR EGST+FADVYY P+GK LRS V++ +
Sbjct: 85 TDASQDDGKFWAIDKPGIAQTPLGWDRTISIRSEGSTRFADVYYITPTGKNLRSKVDVGR 144
Query: 224 YFLEHPEYARAGVKMSQFSFQIPKPLQENY 253
Y E+P+ A A + QFSF P PLQ Y
Sbjct: 145 YLKENPQCAAA---IEQFSFAKPVPLQREY 171
>gi|302819820|ref|XP_002991579.1| hypothetical protein SELMODRAFT_429893 [Selaginella moellendorffii]
gi|300140612|gb|EFJ07333.1| hypothetical protein SELMODRAFT_429893 [Selaginella moellendorffii]
Length = 335
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 113/181 (62%), Gaps = 13/181 (7%)
Query: 75 TANGTSEIEPVPESFQYNRAPFGRYSGPNTQSRVLPSVGAFTVQCADCFKWRLIPTKEKY 134
TA I P E R F R GP P V A+TVQC+ C +WRL+P++E Y
Sbjct: 22 TAEDGRSIVPAAEV----RRCFTRRKGPR------PEVQAYTVQCSRCGQWRLVPSEEVY 71
Query: 135 EEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGS-RLWAIDKPNIAQPPPGWQRLLR 193
E IR VLENP+ CE AR WRPD CD DI Q+G RLWA+DKPN+ + P GW+R
Sbjct: 72 ESIRARVLENPWVCEDARIWRPDACCDIKGDIQQEGDDRLWALDKPNLPKTPAGWKRDFV 131
Query: 194 IRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQIPKPLQENY 253
IR EG ++F D+YY +P GKKLRSMVE+ K+ +HPEY + + QF + IP+P ++Y
Sbjct: 132 IRSEGCSRFGDIYYISPCGKKLRSMVEVAKFLEDHPEY--YDLSVDQFCYTIPQPADKSY 189
Query: 254 V 254
V
Sbjct: 190 V 190
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 178 KPNIAQPPP---GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
KP++ PPP GW R + +RG GS++ DVYY +P ++RS+ ++ ++ ++P Y
Sbjct: 236 KPSLKLPPPVPRGWIREIILRGSGSSRLCDVYYLSPCQARIRSLPDMNEFLHQNPSYLHH 295
Query: 235 GVKMSQFSFQIPKPLQENY 253
GV++ QF F P +E +
Sbjct: 296 GVRLEQFDFGAPASEREIF 314
>gi|326488565|dbj|BAJ93951.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326498931|dbj|BAK02451.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 272
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 71/138 (51%), Positives = 106/138 (76%), Gaps = 1/138 (0%)
Query: 111 SVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDG 170
++ + V+C+ C KWR+IP+K KYE+IRE+++ PF+C+ W+P+V+C DPTDIS+
Sbjct: 75 TIDTYAVECSTCQKWRIIPSKLKYEQIRENIIHVPFSCKYVHGWKPEVTCHDPTDISEGN 134
Query: 171 SRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPE 230
+WAIDKP I Q PPGW+R + +R E T+FADVYY P+G+KLRSM E+++ F ++P+
Sbjct: 135 GMVWAIDKPAIPQTPPGWERKITLRSEQGTRFADVYYICPAGRKLRSMKEVERCFEDNPD 194
Query: 231 YARAGVKMSQFSFQIPKP 248
YA A +++SQFSF++PKP
Sbjct: 195 YA-AVLQLSQFSFKVPKP 211
>gi|168056347|ref|XP_001780182.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668415|gb|EDQ55023.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 417
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 99/138 (71%), Gaps = 4/138 (2%)
Query: 111 SVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDG 170
+V + +QC CFKWR+IPTKEKYE +REH+LE PF C +A+EWR + +CDDP DI D
Sbjct: 69 AVEIYAIQCNACFKWRIIPTKEKYEALREHILEQPFICVQAQEWRENSNCDDPADIDNDE 128
Query: 171 -SRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHP 229
+ LWAIDK +I +PP G+ R + +R E + KFADVYY P GK LRS+ ++QKY EHP
Sbjct: 129 PTVLWAIDKHDIPRPPEGFSRRVVLRAENAKKFADVYYSTPCGKTLRSLPQVQKYLDEHP 188
Query: 230 EYARAGVKMSQFSFQIPK 247
E+ G +++QFSF PK
Sbjct: 189 EH---GAQITQFSFTSPK 203
>gi|302779886|ref|XP_002971718.1| hypothetical protein SELMODRAFT_38000 [Selaginella moellendorffii]
gi|300160850|gb|EFJ27467.1| hypothetical protein SELMODRAFT_38000 [Selaginella moellendorffii]
Length = 141
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/143 (53%), Positives = 100/143 (69%), Gaps = 3/143 (2%)
Query: 112 VGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGS 171
V A+TVQC+ C +WRL+P++E YE IR VLENP+ CE A+ WRPD CD DI Q+G
Sbjct: 1 VQAYTVQCSRCGQWRLVPSEEVYESIRARVLENPWVCEDAKIWRPDACCDIKGDIQQEGD 60
Query: 172 -RLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPE 230
RLWA+DKPN+ + P GW+R IR EG ++F D+YY +P GKKLRSMVE+ K+ +HPE
Sbjct: 61 DRLWALDKPNLPKTPAGWKRDFVIRSEGCSRFGDIYYISPCGKKLRSMVEVAKFLEDHPE 120
Query: 231 YARAGVKMSQFSFQIPKPLQENY 253
Y V QF + IP+P ++Y
Sbjct: 121 YYDLSV--DQFCYTIPQPADKSY 141
>gi|297805086|ref|XP_002870427.1| methyl-CpG-binding domain 12 [Arabidopsis lyrata subsp. lyrata]
gi|297316263|gb|EFH46686.1| methyl-CpG-binding domain 12 [Arabidopsis lyrata subsp. lyrata]
Length = 155
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/144 (53%), Positives = 98/144 (68%), Gaps = 11/144 (7%)
Query: 117 VQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRL--W 174
VQCADC KWRLIP+ + Y+ I+E L+ PF CE+A W P++SC+ P QDG+ W
Sbjct: 2 VQCADCKKWRLIPSMQHYKTIKETQLQTPFVCERACAWTPNMSCNVP----QDGTTCDTW 57
Query: 175 AIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+ NI P GW R + IR + STKFADVYY PSG++LRS +++ + HPEY RA
Sbjct: 58 S----NIPPIPTGWSRSVYIRSD-STKFADVYYFPPSGERLRSSADVRSFLDNHPEYVRA 112
Query: 235 GVKMSQFSFQIPKPLQENYVRKRV 258
GV SQFSFQ+PKPL ENYV+KR
Sbjct: 113 GVNPSQFSFQLPKPLDENYVKKRT 136
>gi|42573509|ref|NP_974851.1| methyl-CPG-binding domain 12 protein [Arabidopsis thaliana]
gi|75173466|sp|Q9FZP6.1|MBD12_ARATH RecName: Full=Putative methyl-CpG-binding domain protein 12;
Short=AtMBD12; Short=MBD12; AltName:
Full=Methyl-CpG-binding protein MBD12
gi|10178095|dbj|BAB11482.1| unnamed protein product [Arabidopsis thaliana]
gi|332006572|gb|AED93955.1| methyl-CPG-binding domain 12 protein [Arabidopsis thaliana]
Length = 155
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 76/144 (52%), Positives = 92/144 (63%), Gaps = 11/144 (7%)
Query: 117 VQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRL--W 174
VQC DC KWRLIP+ + Y I+E L+ PF C W P++SC+ P QDG+ W
Sbjct: 2 VQCTDCKKWRLIPSMQHYNIIKETQLQTPFVCGTTSGWTPNMSCNVP----QDGTTCDTW 57
Query: 175 AIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
P+I P GW R + IR E STKFADVYY PSG++LRS E+Q + HPEY R
Sbjct: 58 ----PSIPPIPTGWSRSVHIRSE-STKFADVYYFPPSGERLRSSAEVQSFLDNHPEYVRE 112
Query: 235 GVKMSQFSFQIPKPLQENYVRKRV 258
GV SQFSFQIPKPL +NYV+KR
Sbjct: 113 GVNRSQFSFQIPKPLDDNYVKKRT 136
>gi|255637085|gb|ACU18874.1| unknown [Glycine max]
Length = 139
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/150 (52%), Positives = 93/150 (62%), Gaps = 12/150 (8%)
Query: 4 HSGKASVRVEKEANEFLGSSLLSNLDESLHEPIDVPSSTSSSASEGQSDETVEGDDQING 63
H GK S+ + E + GSSL S SL +PIDV SS++ + +D N
Sbjct: 2 HRGKFSLTPKNEVKDLTGSSLTSYKHSSLLDPIDVSSSSN------------DENDLPND 49
Query: 64 DASKQLVLYDPTANGTSEIEPVPESFQYNRAPFGRYSGPNTQSRVLPSVGAFTVQCADCF 123
D S QLVLYDP ANG + IE P+ Q R ++ RVLPSVGAFTVQCA CF
Sbjct: 50 DVSNQLVLYDPVANGNNAIELAPDPLQCEHPLLPRSKPSHSVPRVLPSVGAFTVQCASCF 109
Query: 124 KWRLIPTKEKYEEIREHVLENPFTCEKARE 153
KWRLIPTKEKYEEIREH+LE PF C+KARE
Sbjct: 110 KWRLIPTKEKYEEIREHILEQPFVCQKARE 139
>gi|388522195|gb|AFK49159.1| unknown [Lotus japonicus]
Length = 219
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 104/173 (60%), Gaps = 16/173 (9%)
Query: 2 QSHSGKASVRVEKEANEFLGSSLLSNLDESLHEPIDVPSSTSSSASEGQSDETVEGDDQI 61
+ H K + + + + GSS S+ L +PI V SS+S ++ +D+
Sbjct: 18 EMHPRKFFLSPKNQVEDLTGSSCTSHQQSCLPDPIYVSSSSSDDENDLPNDD-------- 69
Query: 62 NGDASKQLVLYDPTANGTSEIE--PVPESFQYNRAPFGRYSGPNTQSR----VLPSVGAF 115
D SKQLVLYDP +N ++IE P P Q P + SR VLPSVGAF
Sbjct: 70 --DVSKQLVLYDPASNENNKIELAPGPLPLQCEPPPLLDLLPRSKPSRSVPKVLPSVGAF 127
Query: 116 TVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQ 168
T QCA CFKWRLIPTKEKYEEIREH+LE PF C++A EWRPDVSCDDP DISQ
Sbjct: 128 TAQCASCFKWRLIPTKEKYEEIREHILEQPFVCQRALEWRPDVSCDDPEDISQ 180
>gi|449462288|ref|XP_004148873.1| PREDICTED: methyl-CpG-binding domain-containing protein 4-like
[Cucumis sativus]
gi|449491535|ref|XP_004158929.1| PREDICTED: methyl-CpG-binding domain-containing protein 4-like
[Cucumis sativus]
Length = 181
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 95/149 (63%), Gaps = 9/149 (6%)
Query: 104 TQSRVLPSVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDP 163
T+S LP VG F QC +CFKWRLI T+E+YE IR ++E PFTC++ + D SC+DP
Sbjct: 13 TKSTRLP-VGLFAAQCEECFKWRLISTQEEYEGIRSKIIEEPFTCQR----KTDTSCEDP 67
Query: 164 TDISQDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQK 223
DI D +R W IDKPNI + P G+ R L +R + TKF D YY P+GK +RS E+
Sbjct: 68 PDIDYDTTRTWGIDKPNIPKTPEGFTRRLVLR-KNFTKF-DAYYVTPTGKTVRSSTEVLA 125
Query: 224 YFLEHPEYARAGVKMSQFSFQIPKPLQEN 252
+ +P+Y + +S FSF +PK ++E
Sbjct: 126 FVEANPQY--KDIALSNFSFAVPKIMEET 152
>gi|222631548|gb|EEE63680.1| hypothetical protein OsJ_18498 [Oryza sativa Japonica Group]
Length = 267
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 94/151 (62%), Gaps = 7/151 (4%)
Query: 111 SVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDG 170
S+G + VQC +C KWR +PTK+++E IRE+ E P+ C + RPD SC+DP DI D
Sbjct: 108 SIGMYAVQCCECHKWRKVPTKDEFETIRENFTEEPWHCSR----RPDCSCEDPADIEYDS 163
Query: 171 SRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPE 230
SR+W +DKPNI +PP G +RL+ +RG+ S D YY P+GK++R E+ K+ +P+
Sbjct: 164 SRIWVLDKPNIPKPPAGTERLVIMRGDLSK--MDTYYVMPNGKRVRCTAEVDKFLEANPQ 221
Query: 231 YARAGVKMSQFSFQIPKPLQENYVRKRVPKA 261
Y + + FSF PK ++E V K+
Sbjct: 222 Y-KDRFSVESFSFTTPKIVEETVSHNSVWKS 251
>gi|125552295|gb|EAY98004.1| hypothetical protein OsI_19918 [Oryza sativa Indica Group]
Length = 271
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 94/151 (62%), Gaps = 7/151 (4%)
Query: 111 SVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDG 170
S+G + VQC +C KWR +PTK+++E IRE+ E P+ C + RPD SC+DP DI D
Sbjct: 112 SIGMYAVQCCECHKWRKVPTKDEFETIRENFTEEPWHCSR----RPDCSCEDPADIEYDS 167
Query: 171 SRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPE 230
SR+W +DKPNI +PP G +RL+ +RG+ S D YY P+GK++R E+ K+ +P+
Sbjct: 168 SRIWVLDKPNIPKPPAGTERLVIMRGDLSK--MDTYYVMPNGKRVRCTAEVDKFLEANPQ 225
Query: 231 YARAGVKMSQFSFQIPKPLQENYVRKRVPKA 261
Y + + FSF PK ++E V K+
Sbjct: 226 Y-KDRFSVESFSFTTPKIVEETVSHNSVWKS 255
>gi|147788831|emb|CAN77824.1| hypothetical protein VITISV_015457 [Vitis vinifera]
Length = 200
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 96/159 (60%), Gaps = 9/159 (5%)
Query: 95 PFGRYSGPNTQSRVL-PSVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKARE 153
P + G +S ++ S+GA+ VQC C KWRLI T+E+YEEIR +E PF C K
Sbjct: 24 PMEKTKGKKRKSALVRSSIGAYAVQCEACLKWRLIDTEEEYEEIRSRFIEEPFVCSK--- 80
Query: 154 WRPDVSCDDPTDISQDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGK 213
+ DVSC+DPTDI D +R WA DKPN+ + P G+QR L +R + S D YY P+GK
Sbjct: 81 -KADVSCEDPTDIEYDATRTWAADKPNVPKTPKGFQRDLVLRKDFSK--MDAYYITPTGK 137
Query: 214 KLRSMVEIQKYFLEHPEYARAGVKMSQFSFQIPKPLQEN 252
K+R++ EI Y +P+ + S F+F +PK + +
Sbjct: 138 KVRALSEIAAYLSSNPDC--KDLSPSDFNFMVPKIMADT 174
>gi|297604484|ref|NP_001055505.2| Os05g0404600 [Oryza sativa Japonica Group]
gi|255676354|dbj|BAF17419.2| Os05g0404600, partial [Oryza sativa Japonica Group]
Length = 168
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 94/151 (62%), Gaps = 7/151 (4%)
Query: 111 SVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDG 170
S+G + VQC +C KWR +PTK+++E IRE+ E P+ C + RPD SC+DP DI D
Sbjct: 9 SIGMYAVQCCECHKWRKVPTKDEFETIRENFTEEPWHCSR----RPDCSCEDPADIEYDS 64
Query: 171 SRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPE 230
SR+W +DKPNI +PP G +RL+ +RG+ S D YY P+GK++R E+ K+ +P+
Sbjct: 65 SRIWVLDKPNIPKPPAGTERLVIMRGDLSK--MDTYYVMPNGKRVRCTAEVDKFLEANPQ 122
Query: 231 YARAGVKMSQFSFQIPKPLQENYVRKRVPKA 261
Y + + FSF PK ++E V K+
Sbjct: 123 Y-KDRFSVESFSFTTPKIVEETVSHNSVWKS 152
>gi|357141925|ref|XP_003572396.1| PREDICTED: uncharacterized protein LOC100846314 [Brachypodium
distachyon]
Length = 371
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 81/125 (64%), Gaps = 3/125 (2%)
Query: 133 KYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRLWAIDKPNIAQPPPGWQRLL 192
KYEEIRE + PF+CE A EW+P V+CDDPTD S D + WAIDK I Q P W R +
Sbjct: 200 KYEEIREKLPSGPFSCEHASEWKPGVTCDDPTDASLDDGKFWAIDKQGIPQTPLEWDRTI 259
Query: 193 RIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQIPKPLQEN 252
IR EG +FADVYY P+G LRS +++ +Y E+P+ + QFSF P PL+ +
Sbjct: 260 SIRSEGCIRFADVYYFTPTGLMLRSKLDVGRYLDENPQ---CDAVIEQFSFATPVPLKGD 316
Query: 253 YVRKR 257
YVRKR
Sbjct: 317 YVRKR 321
>gi|225436873|ref|XP_002273070.1| PREDICTED: methyl-CpG-binding domain-containing protein 4-like
isoform 1 [Vitis vinifera]
Length = 179
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 96/159 (60%), Gaps = 9/159 (5%)
Query: 95 PFGRYSGPNTQSRVL-PSVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKARE 153
P + G +S ++ S+GA+ VQC C KWRLI T+E+YEEIR +E PF C K
Sbjct: 3 PMEKTKGKKRKSALVRSSIGAYAVQCEACLKWRLIDTEEEYEEIRSRFIEEPFVCSK--- 59
Query: 154 WRPDVSCDDPTDISQDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGK 213
+ DVSC+DPTDI D +R WA DKPN+ + P G+QR L +R + S D YY P+GK
Sbjct: 60 -KADVSCEDPTDIEYDATRTWAADKPNVPKTPKGFQRDLVLRKDFSK--MDAYYITPTGK 116
Query: 214 KLRSMVEIQKYFLEHPEYARAGVKMSQFSFQIPKPLQEN 252
K+R++ EI Y +P+ + S F+F +PK + +
Sbjct: 117 KVRALSEIAAYLSSNPDC--KDLSPSDFNFMVPKIMADT 153
>gi|296086678|emb|CBI32313.3| unnamed protein product [Vitis vinifera]
Length = 176
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 90/145 (62%), Gaps = 8/145 (5%)
Query: 108 VLPSVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDIS 167
V S+GA+ VQC C KWRLI T+E+YEEIR +E PF C K + DVSC+DPTDI
Sbjct: 14 VRSSIGAYAVQCEACLKWRLIDTEEEYEEIRSRFIEEPFVCSK----KADVSCEDPTDIE 69
Query: 168 QDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLE 227
D +R WA DKPN+ + P G+QR L +R + S D YY P+GKK+R++ EI Y
Sbjct: 70 YDATRTWAADKPNVPKTPKGFQRDLVLRKDFSK--MDAYYITPTGKKVRALSEIAAYLSS 127
Query: 228 HPEYARAGVKMSQFSFQIPKPLQEN 252
+P+ + S F+F +PK + +
Sbjct: 128 NPDC--KDLSPSDFNFMVPKIMADT 150
>gi|50878306|gb|AAT85081.1| putative methyl-binding domain protein [Oryza sativa Japonica
Group]
gi|215740483|dbj|BAG97139.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 157
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 91/147 (61%), Gaps = 7/147 (4%)
Query: 115 FTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGSRLW 174
+ VQC +C KWR +PTK+++E IRE+ E P+ C + RPD SC+DP DI D SR+W
Sbjct: 2 YAVQCCECHKWRKVPTKDEFETIRENFTEEPWHCSR----RPDCSCEDPADIEYDSSRIW 57
Query: 175 AIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+DKPNI +PP G +RL+ +RG+ S D YY P+GK++R E+ K+ +P+Y +
Sbjct: 58 VLDKPNIPKPPAGTERLVIMRGDLSK--MDTYYVMPNGKRVRCTAEVDKFLEANPQY-KD 114
Query: 235 GVKMSQFSFQIPKPLQENYVRKRVPKA 261
+ FSF PK ++E V K+
Sbjct: 115 RFSVESFSFTTPKIVEETVSHNSVWKS 141
>gi|224117174|ref|XP_002331766.1| methyl binding domain protein [Populus trichocarpa]
gi|224117178|ref|XP_002331767.1| hypothetical protein POPTRDRAFT_585558 [Populus trichocarpa]
gi|222874359|gb|EEF11490.1| methyl binding domain protein [Populus trichocarpa]
gi|222874360|gb|EEF11491.1| hypothetical protein POPTRDRAFT_585558 [Populus trichocarpa]
Length = 182
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 98/168 (58%), Gaps = 12/168 (7%)
Query: 93 RAPFGRYSGPNTQSRVLPSVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAR 152
R+P + P + S+ + QC C KWR+IPT+E+YEEIR + ENP+ C++
Sbjct: 6 RSPETPKTSPKNPRVAVRSIDTYAAQCDKCLKWRVIPTEEEYEEIRSKMEENPYVCDR-- 63
Query: 153 EWRPDVSCDDPTDISQDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSG 212
+P VSCDDP DI + +R W ID+P + + P G++R L +R + S D YY P+G
Sbjct: 64 --KPGVSCDDPADIEYNATRTWVIDRPGVPKTPEGFKRSLVLRRDFSK--MDAYYITPTG 119
Query: 213 KKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQIPKPLQ----ENYVRK 256
KKLR+ EI + +P+Y V +S F+F PK ++ E+ VRK
Sbjct: 120 KKLRTRNEIAAFIEANPKY--KDVNLSAFNFTSPKVMEDTIPEDAVRK 165
>gi|357442669|ref|XP_003591612.1| hypothetical protein MTR_1g089750 [Medicago truncatula]
gi|355480660|gb|AES61863.1| hypothetical protein MTR_1g089750 [Medicago truncatula]
gi|388499614|gb|AFK37873.1| unknown [Medicago truncatula]
Length = 176
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 87/142 (61%), Gaps = 8/142 (5%)
Query: 111 SVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDG 170
SV + QC C KWR+I T+E++EEIR ++ +PF C K + + SCDDP DI D
Sbjct: 20 SVDIYAAQCKLCMKWRVIDTQEEFEEIRHKIIRDPFDCSK----KANRSCDDPADIEYDS 75
Query: 171 SRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPE 230
SR W IDKPNI + P G++++L +R + S D YY P+GKKLR+ EI Y +HP+
Sbjct: 76 SRTWVIDKPNIPKTPQGFKKILVLRKDYSK--LDSYYITPTGKKLRTRNEIAAYLKDHPQ 133
Query: 231 YARAGVKMSQFSFQIPKPLQEN 252
+GV + F F PK +Q+
Sbjct: 134 --PSGVSAADFDFSSPKIMQDT 153
>gi|388503158|gb|AFK39645.1| unknown [Lotus japonicus]
Length = 176
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 82/142 (57%), Gaps = 8/142 (5%)
Query: 111 SVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDG 170
SV + QC C KWR++ T+E++EE R+ E PF C + + + SCDDP DI D
Sbjct: 24 SVDIYATQCIKCLKWRVVDTQEEFEEFRQKANEEPFDCSR----KANCSCDDPADIEYDS 79
Query: 171 SRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPE 230
SR W IDKPN+ + P G++R L +R + S D YY P+GKKLR+ EI + EHPE
Sbjct: 80 SRTWVIDKPNVPKTPQGFRRSLVLRKDYSK--LDAYYITPTGKKLRTRNEIAAFLKEHPE 137
Query: 231 YARAGVKMSQFSFQIPKPLQEN 252
+ G+ F F PK + E
Sbjct: 138 F--EGISAQDFDFSSPKVMHET 157
>gi|356535711|ref|XP_003536387.1| PREDICTED: methyl-CpG-binding domain-containing protein 4-like
[Glycine max]
Length = 193
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 90/152 (59%), Gaps = 10/152 (6%)
Query: 102 PNTQSRVLP--SVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVS 159
P++ R L SV + QC +C KWR I T+E++EEIR V E PF C + + + S
Sbjct: 27 PSSSKRTLSQGSVDIYAAQCKNCLKWREIDTQEEFEEIRSKVAEEPFLCSR----KANSS 82
Query: 160 CDDPTDISQDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMV 219
CD+P DI D SR W IDKPN+ + P G++R L +R + S D YY P+GKKLR+
Sbjct: 83 CDEPGDIKYDSSRTWVIDKPNLPKTPQGFKRSLVLRKDYSK--LDAYYITPAGKKLRTRN 140
Query: 220 EIQKYFLEHPEYARAGVKMSQFSFQIPKPLQE 251
EI + ++PE+ GV S F F PK +Q+
Sbjct: 141 EIAAFLKDNPEF--KGVSASDFDFSSPKIMQD 170
>gi|358248398|ref|NP_001239875.1| uncharacterized protein LOC100802350 [Glycine max]
gi|255641529|gb|ACU21038.1| unknown [Glycine max]
Length = 177
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 90/153 (58%), Gaps = 10/153 (6%)
Query: 102 PNTQSRVLP--SVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVS 159
P++ R L SV + QC +C KWR I T+E++EEIR V E PF C + + + S
Sbjct: 11 PSSSKRTLSQGSVDIYAAQCKNCLKWREIDTQEEFEEIRSKVTEEPFLCSR----KANSS 66
Query: 160 CDDPTDISQDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMV 219
CD+P DI D +R W IDKPN+ + P G++R L +R + S D YY P+GKKLR+
Sbjct: 67 CDEPGDIEYDSTRTWVIDKPNLPKTPQGFKRSLVLRKDYSK--LDAYYITPAGKKLRTRN 124
Query: 220 EIQKYFLEHPEYARAGVKMSQFSFQIPKPLQEN 252
EI + ++PE+ GV S F F PK +Q+
Sbjct: 125 EIAAFLKDNPEF--KGVSASDFDFSSPKIMQDT 155
>gi|224128656|ref|XP_002320386.1| methyl binding domain protein [Populus trichocarpa]
gi|118485542|gb|ABK94623.1| unknown [Populus trichocarpa]
gi|222861159|gb|EEE98701.1| methyl binding domain protein [Populus trichocarpa]
Length = 182
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 90/150 (60%), Gaps = 12/150 (8%)
Query: 111 SVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDG 170
S+ + QC C KWR+I T+E+YEEIR + E+PF C + +P VSCDDP DI +
Sbjct: 24 SIDTYAAQCDKCLKWRVIATEEEYEEIRSKMEESPFVCNR----KPGVSCDDPADIEYNA 79
Query: 171 SRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPE 230
+R W ID+P I + P G++R L +R + S D YY P+GKKLR+ EI + +P+
Sbjct: 80 TRTWVIDRPGIPKTPEGFKRSLVLRRDFSK--MDAYYITPTGKKLRTRNEIAAFIDANPK 137
Query: 231 YARAGVKMSQFSFQIPKPLQ----ENYVRK 256
Y V +S F+F PK ++ E+ VRK
Sbjct: 138 Y--KDVNLSDFNFTSPKVMEDTIPEDAVRK 165
>gi|388511439|gb|AFK43781.1| unknown [Lotus japonicus]
Length = 180
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 82/142 (57%), Gaps = 8/142 (5%)
Query: 111 SVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDG 170
S+ + QC C KWR+I T++++EEIR V + PF C + + + SCDDP DI D
Sbjct: 25 SIDVYAAQCIKCLKWRVIDTQQEFEEIRHKVSQEPFDCSR----KANCSCDDPADIEYDS 80
Query: 171 SRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPE 230
SR W IDKPN+ + P G++R L +R + S D YY P+GKKLR+ E + +HPE
Sbjct: 81 SRTWVIDKPNLPKTPEGFKRSLVLRKDYSK--LDAYYITPTGKKLRTRNEAAAFLKDHPE 138
Query: 231 YARAGVKMSQFSFQIPKPLQEN 252
G+ F F PK +Q+
Sbjct: 139 L--QGISAQDFDFSCPKIMQDT 158
>gi|297604486|ref|NP_001055506.2| Os05g0404700 [Oryza sativa Japonica Group]
gi|125552290|gb|EAY97999.1| hypothetical protein OsI_19913 [Oryza sativa Indica Group]
gi|222631549|gb|EEE63681.1| hypothetical protein OsJ_18499 [Oryza sativa Japonica Group]
gi|255676355|dbj|BAF17420.2| Os05g0404700 [Oryza sativa Japonica Group]
Length = 175
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 87/141 (61%), Gaps = 7/141 (4%)
Query: 112 VGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGS 171
+ + + C C KWR IPTKE++E IRE+ P+ C K R D SC+ P DI D S
Sbjct: 10 ITMYAITCCKCEKWRTIPTKEEFEVIRENYPAKPWFCSKKR----DCSCEHPEDIQYDTS 65
Query: 172 RLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEY 231
R+WAID+PNI +PPP +RLL +R + S D YY P+GK+ + +I ++ E+PEY
Sbjct: 66 RIWAIDRPNIPKPPPKTERLLIMRNDLSK--MDAYYVLPNGKRAKGKPDIDRFLKENPEY 123
Query: 232 ARAGVKMSQFSFQIPKPLQEN 252
A A + +S F+F PK ++E
Sbjct: 124 A-ATLPLSSFNFSTPKIVKET 143
>gi|125552296|gb|EAY98005.1| hypothetical protein OsI_19919 [Oryza sativa Indica Group]
Length = 175
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 87/141 (61%), Gaps = 7/141 (4%)
Query: 112 VGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGS 171
+ + + C C KWR IPTKE++E IRE+ P+ C K R D SC+ P DI D S
Sbjct: 10 ITMYAITCCKCEKWRTIPTKEEFEVIRENYPAKPWFCSKKR----DCSCEHPEDIQYDTS 65
Query: 172 RLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEY 231
R+WAID+PNI +PPP +RLL +R + S D YY P+GK+ + +I ++ E+PEY
Sbjct: 66 RIWAIDRPNIPKPPPKTERLLIMRNDLSK--MDAYYVLPNGKRAKGKPDIDRFLKENPEY 123
Query: 232 ARAGVKMSQFSFQIPKPLQEN 252
A A + +S F+F PK ++E
Sbjct: 124 A-ATLPLSSFNFSTPKIVKET 143
>gi|242090489|ref|XP_002441077.1| hypothetical protein SORBIDRAFT_09g019910 [Sorghum bicolor]
gi|241946362|gb|EES19507.1| hypothetical protein SORBIDRAFT_09g019910 [Sorghum bicolor]
Length = 180
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 88/142 (61%), Gaps = 8/142 (5%)
Query: 111 SVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDG 170
SV + VQC C+KW +P KE++E +RE+ ++P+ C + RPD SC D DI D
Sbjct: 25 SVALYAVQCYKCYKWSTVP-KEEFETLRENFTKDPWFCSR----RPDCSCADDADIEYDS 79
Query: 171 SRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPE 230
SR+W +DKPNI +PPPG +RL+ +R + S D YY P+GK+ R ++ K+ +PE
Sbjct: 80 SRIWVLDKPNIPKPPPGTERLVILRSDYSK--MDTYYVMPNGKRARCAGDVDKFLEANPE 137
Query: 231 YARAGVKMSQFSFQIPKPLQEN 252
Y + + +S FSF PK ++E
Sbjct: 138 Y-KNSISVSDFSFAPPKVVEET 158
>gi|297799740|ref|XP_002867754.1| hypothetical protein ARALYDRAFT_914336 [Arabidopsis lyrata subsp.
lyrata]
gi|297313590|gb|EFH44013.1| hypothetical protein ARALYDRAFT_914336 [Arabidopsis lyrata subsp.
lyrata]
Length = 176
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 91/160 (56%), Gaps = 13/160 (8%)
Query: 111 SVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDG 170
S+ F VQC C KWR I T+++YEEIR + E+P+ CEK + +SC+D D++ D
Sbjct: 25 SIDVFAVQCEKCLKWRQIGTQDEYEEIRSRIQEDPYVCEK----KEGISCEDAGDLNYDS 80
Query: 171 SRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPE 230
SR W IDKP + + P G++R L +R + S D YY P+GKKL+S EI + + +
Sbjct: 81 SRTWVIDKPGLPKTPRGFKRSLILRKDYSK--MDAYYITPTGKKLKSRNEIAAFIDANQD 138
Query: 231 YARAGVKMSQFSFQIPKPLQENYVRKRVPKAHTSHDTPKA 270
Y A + F+F +PK ++E VP S TPK
Sbjct: 139 YKYA--LLGDFNFTVPKVMEET-----VPNGIISDRTPKT 171
>gi|326519819|dbj|BAK00282.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 193
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 101/161 (62%), Gaps = 9/161 (5%)
Query: 94 APFGRYSGPNTQSR--VLPSVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKA 151
AP G ++Q + S+G + VQC +C KWR + TK+++E IRE+ E+P+ C K
Sbjct: 5 APVSASPGSSSQKKRGATESIGLYAVQCCECHKWRTVSTKDEFETIRENFTEDPWFCNK- 63
Query: 152 REWRPDVSCDDPTDISQDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPS 211
RP+ SC+DP DI D SR+W IDKPNI +PPP +RL+ +RG+ S D+YY P+
Sbjct: 64 ---RPECSCEDPPDIEYDSSRIWVIDKPNIPKPPPKTERLVIMRGDLSK--MDIYYVLPN 118
Query: 212 GKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQIPKPLQEN 252
GK+ R + ++QK+ +PEY + + FSF +PK ++E
Sbjct: 119 GKRARGIGDVQKFLDTNPEY-KDQISAESFSFTVPKIVEET 158
>gi|162461333|ref|NP_001105172.1| methyl-binding domain protein MBD101 [Zea mays]
gi|13936238|gb|AAK40305.1| methyl-binding domain protein MBD101 [Zea mays]
gi|195658397|gb|ACG48666.1| methyl-binding domain protein MBD101 [Zea mays]
gi|224032853|gb|ACN35502.1| unknown [Zea mays]
gi|413949329|gb|AFW81978.1| methyl-binding domain protein MBD101 [Zea mays]
Length = 177
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 88/142 (61%), Gaps = 8/142 (5%)
Query: 111 SVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDG 170
SV + VQC C+KW +P KE++E +RE+ ++P+ C + RPD SC+D DI D
Sbjct: 22 SVALYAVQCYKCYKWSTVP-KEEFETLRENFTKDPWFCSR----RPDSSCEDDADIEYDS 76
Query: 171 SRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPE 230
SR+W +DKPNI +PPP +RL+ +RG+ S D YY P+GK+ R ++ K+ +PE
Sbjct: 77 SRIWVLDKPNIPKPPPETERLVVMRGDYSK--MDTYYVMPNGKRARCAGDVDKFLEANPE 134
Query: 231 YARAGVKMSQFSFQIPKPLQEN 252
Y + + S FSF PK ++E
Sbjct: 135 Y-KDRISASDFSFAPPKVVEET 155
>gi|414870394|tpg|DAA48951.1| TPA: hypothetical protein ZEAMMB73_965630 [Zea mays]
Length = 165
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 88/141 (62%), Gaps = 8/141 (5%)
Query: 111 SVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDG 170
SV + VQC C+KW +P KE++E +RE+ ++P+ C + RPD SC+D DI D
Sbjct: 10 SVALYAVQCYKCYKWSTVP-KEEFETLRENFTKDPWFCSR----RPDSSCEDDADIEYDS 64
Query: 171 SRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPE 230
SR+W +DKPNI +PPP +RL+ +RG+ S D YY P+GK+ R ++ K+ +PE
Sbjct: 65 SRIWVLDKPNIPKPPPETERLVVMRGDYSK--MDTYYVMPNGKRARCAGDVDKFLEANPE 122
Query: 231 YARAGVKMSQFSFQIPKPLQE 251
Y + + S FSF PK ++E
Sbjct: 123 Y-KDRISASDFSFAPPKVVEE 142
>gi|134285524|gb|ABO69707.1| MBD1 [Triticum aestivum]
Length = 193
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 95/142 (66%), Gaps = 7/142 (4%)
Query: 111 SVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDG 170
S+G + VQC +C KWR + TK+++E IRE+ E+P++C K RP+ SC+DP DI D
Sbjct: 24 SIGLYAVQCCECHKWRTVSTKDEFETIRENFTEDPWSCSK----RPECSCEDPPDIEYDS 79
Query: 171 SRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPE 230
SR+W IDKPNI +PPP +RL+ +RG+ S D+YY P+GK+ R + ++QK+ +PE
Sbjct: 80 SRIWVIDKPNIPKPPPKTERLVIMRGDLSK--MDIYYVLPNGKRARGIGDVQKFLDTNPE 137
Query: 231 YARAGVKMSQFSFQIPKPLQEN 252
Y + + FSF +PK +++
Sbjct: 138 Y-KDRISAESFSFTVPKIVEKT 158
>gi|255567630|ref|XP_002524794.1| DNA binding protein, putative [Ricinus communis]
gi|223535978|gb|EEF37637.1| DNA binding protein, putative [Ricinus communis]
Length = 160
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 96/162 (59%), Gaps = 9/162 (5%)
Query: 109 LPSVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQ 168
+ SV + QC C KWR+I T+E+YEEIR ++ENPF C + +P +SC+DP DI
Sbjct: 1 MRSVDTYAAQCEKCMKWRVIETEEEYEEIRSKIVENPFYCNR----KPGISCEDPADIEC 56
Query: 169 DGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEH 228
D SR W IDKP + + P G++R L +R + S D YY P+GKKLR+ EI + +
Sbjct: 57 DASRTWVIDKPGLPKTPGGFKRSLVLRRDFSK--MDAYYITPTGKKLRTRNEIAAFLEAN 114
Query: 229 PEYARAGVKMSQFSFQIPKPLQENYVRKRVPKAHTSHDTPKA 270
P+Y GV + F+F PK ++E V + V KA S + K
Sbjct: 115 PKY--KGVSIEDFNFTSPKVMEET-VPEDVKKATASASSKKV 153
>gi|2827551|emb|CAA16559.1| predicted protein [Arabidopsis thaliana]
gi|7269120|emb|CAB79229.1| predicted protein [Arabidopsis thaliana]
Length = 566
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 91/159 (57%), Gaps = 13/159 (8%)
Query: 111 SVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDG 170
S+ F VQC C KWR I T+++YE+IR V E+PF C K +E VSC+D D++ D
Sbjct: 45 SIDVFAVQCEKCMKWRKIDTQDEYEDIRSRVQEDPFFC-KTKE---GVSCEDVGDLNYDS 100
Query: 171 SRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPE 230
SR W IDKP + + P G++R L +R + S D YY P+GKKL+S EI + + +
Sbjct: 101 SRTWVIDKPGLPRTPRGFKRSLILRKDYSK--MDAYYITPTGKKLKSRNEIAAFIDANQD 158
Query: 231 YARAGVKMSQFSFQIPKPLQENYVRKRVPKAHTSHDTPK 269
Y A + F+F +PK ++E VP S TPK
Sbjct: 159 YKYA--LLGDFNFTVPKVMEET-----VPSGILSDRTPK 190
>gi|15229373|ref|NP_191862.1| methyl-CPG-binding domain 4 protein [Arabidopsis thaliana]
gi|75181050|sp|Q9LYB9.1|MBD4_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 4;
Short=AtMBD4; Short=MBD04; AltName:
Full=Methyl-CpG-binding protein MBD4
gi|7573432|emb|CAB87748.1| putative protein [Arabidopsis thaliana]
gi|34365655|gb|AAQ65139.1| At3g63030 [Arabidopsis thaliana]
gi|51971397|dbj|BAD44363.1| unknown protein [Arabidopsis thaliana]
gi|332646905|gb|AEE80426.1| methyl-CPG-binding domain 4 protein [Arabidopsis thaliana]
Length = 186
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 87/140 (62%), Gaps = 8/140 (5%)
Query: 112 VGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGS 171
+ + QC +C KWR+I ++E+YE+IR +LE+PF C+K + +SC++P DI D S
Sbjct: 25 IDTYAAQCDNCHKWRVIDSQEEYEDIRSKMLEDPFNCQK----KQGMSCEEPADIDYDSS 80
Query: 172 RLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEY 231
R W IDKP + + P G++R L +R + S D YY P+GKKLRS EI + +PE+
Sbjct: 81 RTWVIDKPGLPKTPKGFKRSLVLRKDYSK--MDTYYFTPTGKKLRSRNEIAAFVEANPEF 138
Query: 232 ARAGVKMSQFSFQIPKPLQE 251
A + F+F +PK +++
Sbjct: 139 RNA--PLGDFNFTVPKVMED 156
>gi|326494492|dbj|BAJ90515.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 193
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 100/161 (62%), Gaps = 9/161 (5%)
Query: 94 APFGRYSGPNTQSR--VLPSVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKA 151
AP G ++Q + S+G + VQC +C KWR + TK+++E IRE+ E+P+ C K
Sbjct: 5 APVSASPGSSSQKKRGATESIGLYAVQCCECHKWRTVSTKDEFETIRENFTEDPWFCNK- 63
Query: 152 REWRPDVSCDDPTDISQDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPS 211
RP+ SC+DP DI D SR+W IDKPNI +PPP +RL+ +RG+ S D+YY P+
Sbjct: 64 ---RPECSCEDPPDIEYDSSRIWVIDKPNIPKPPPKTERLVIMRGDLSK--MDIYYVLPN 118
Query: 212 GKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQIPKPLQEN 252
GK+ R + ++ K+ +PEY + + FSF +PK ++E
Sbjct: 119 GKRARGIGDVLKFLDTNPEY-KDQISAESFSFTVPKIVEET 158
>gi|297817640|ref|XP_002876703.1| methyl-CpG-binding domain 4 [Arabidopsis lyrata subsp. lyrata]
gi|297322541|gb|EFH52962.1| methyl-CpG-binding domain 4 [Arabidopsis lyrata subsp. lyrata]
Length = 182
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 87/141 (61%), Gaps = 8/141 (5%)
Query: 112 VGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGS 171
+ + QC +C KWR+I ++E+YE+IR +LE+PF C+K + +SC++P D+ D S
Sbjct: 24 IDTYAAQCENCHKWRVIDSQEEYEDIRSKMLEDPFNCQK----KQGMSCEEPADLDYDSS 79
Query: 172 RLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEY 231
R W IDKP + + P G++R L +R + S D YY P+GKKLRS EI + +PE+
Sbjct: 80 RTWVIDKPGLPKTPQGFRRSLVLRKDYSK--MDTYYFTPTGKKLRSRNEIAAFVEANPEF 137
Query: 232 ARAGVKMSQFSFQIPKPLQEN 252
A + F+F +PK +++
Sbjct: 138 KNA--PLGDFNFTVPKVMEDT 156
>gi|30685914|ref|NP_567667.2| methyl-CPG-binding domain 1 [Arabidopsis thaliana]
gi|75110947|sp|Q5XEN5.1|MBD1_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 1;
Short=AtMBD1; Short=MBD01; AltName:
Full=Methyl-CpG-binding protein MBD1
gi|54261715|gb|AAV31161.1| At4g22745 [Arabidopsis thaliana]
gi|58331793|gb|AAW70394.1| At4g22745 [Arabidopsis thaliana]
gi|332659248|gb|AEE84648.1| methyl-CPG-binding domain 1 [Arabidopsis thaliana]
Length = 204
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 91/159 (57%), Gaps = 13/159 (8%)
Query: 111 SVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDG 170
S+ F VQC C KWR I T+++YE+IR V E+PF C K +E VSC+D D++ D
Sbjct: 51 SIDVFAVQCEKCMKWRKIDTQDEYEDIRSRVQEDPFFC-KTKE---GVSCEDVGDLNYDS 106
Query: 171 SRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPE 230
SR W IDKP + + P G++R L +R + S D YY P+GKKL+S EI + + +
Sbjct: 107 SRTWVIDKPGLPRTPRGFKRSLILRKDYSK--MDAYYITPTGKKLKSRNEIAAFIDANQD 164
Query: 231 YARAGVKMSQFSFQIPKPLQENYVRKRVPKAHTSHDTPK 269
Y A + F+F +PK ++E VP S TPK
Sbjct: 165 YKYA--LLGDFNFTVPKVMEET-----VPSGILSDRTPK 196
>gi|357133777|ref|XP_003568500.1| PREDICTED: methyl-CpG-binding domain-containing protein 1-like
[Brachypodium distachyon]
Length = 184
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 90/142 (63%), Gaps = 7/142 (4%)
Query: 111 SVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDG 170
++G + VQC +C KWR +PTKE++E +RE+ ++P+ C K R D SC DP DI D
Sbjct: 25 TIGLYAVQCCECHKWRTVPTKEEFETLRENFTDDPWVCTK----RLDCSCKDPGDIEYDS 80
Query: 171 SRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPE 230
SR+W IDKPNI +PPP RL +RG+ S D+YY P+GK+ R ++QK+ +P+
Sbjct: 81 SRIWVIDKPNIPKPPPKTDRLAVMRGDLSK--LDIYYVMPNGKRARCTGDVQKFLDANPD 138
Query: 231 YARAGVKMSQFSFQIPKPLQEN 252
Y + + + FSF PK ++E
Sbjct: 139 Y-KDRISVESFSFATPKIVEET 159
>gi|413945315|gb|AFW77964.1| hypothetical protein ZEAMMB73_721408 [Zea mays]
Length = 193
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 87/144 (60%), Gaps = 8/144 (5%)
Query: 111 SVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDG 170
SV + VQC C+KWR +P KE++E +RE+ ++P+ C + RPD SC+D DI D
Sbjct: 25 SVALYAVQCYKCYKWRTVP-KEEFETLRENFTKDPWFCSR----RPDCSCEDDADIEYDS 79
Query: 171 SRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPE 230
SR+W +D PNI +PPP +RL+ I G T+ D YY P+GK+ R ++ K+ +P
Sbjct: 80 SRIWVLDTPNIPKPPPETERLV-IMGGDYTRM-DTYYVMPNGKRARCAGDVDKFLEANPA 137
Query: 231 YARAGVKMSQFSFQIPKPLQENYV 254
Y ++ + S F F P+ ++E V
Sbjct: 138 Y-KSRISASDFDFAPPEVVEETVV 160
>gi|242090487|ref|XP_002441076.1| hypothetical protein SORBIDRAFT_09g019900 [Sorghum bicolor]
gi|241946361|gb|EES19506.1| hypothetical protein SORBIDRAFT_09g019900 [Sorghum bicolor]
Length = 180
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 85/145 (58%), Gaps = 8/145 (5%)
Query: 111 SVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDG 170
SVG + VQC C+KW +P KE++E +RE+ ++P+ C + RPD SC+D DI D
Sbjct: 25 SVGLYAVQCHKCYKWSTVP-KEEFETLRENFTKDPWFCSR----RPDCSCEDDADIEYDN 79
Query: 171 SRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPE 230
S +W D PNI +PPPG +RL+ +R + S D YY P+GK + ++ K+ +PE
Sbjct: 80 SHIWVFDNPNIPKPPPGTERLVIMRSDYSE--MDPYYVMPNGKHAKCAGDVDKFLEANPE 137
Query: 231 YARAGVKMSQFSFQIPKPLQENYVR 255
Y + + S FSF K ++E R
Sbjct: 138 Y-KNRMSASDFSFAPLKVVEETVPR 161
>gi|357498447|ref|XP_003619512.1| hypothetical protein MTR_6g055750 [Medicago truncatula]
gi|355494527|gb|AES75730.1| hypothetical protein MTR_6g055750 [Medicago truncatula]
Length = 174
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 79/145 (54%), Gaps = 8/145 (5%)
Query: 108 VLPSVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDIS 167
V+ + QC C K+R I T+E++EEI + + PF C K + + SCDDP DI
Sbjct: 15 VISQNDIYVAQCKLCMKFREIDTQEEFEEILHKIKQEPFDCSK----KANCSCDDPADIE 70
Query: 168 QDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLE 227
D SR W KPNI + P G++R+ +R + S D YY P+GK+LRS EI Y +
Sbjct: 71 YDSSRTWVKYKPNIPKTPKGFKRISVLRDDYSK--LDSYYITPTGKQLRSRNEIASYLKD 128
Query: 228 HPEYARAGVKMSQFSFQIPKPLQEN 252
P+ +GV F F PK +Q+
Sbjct: 129 LPQ--PSGVSTLDFDFSSPKVMQDT 151
>gi|125606191|gb|EAZ45227.1| hypothetical protein OsJ_29871 [Oryza sativa Japonica Group]
Length = 169
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 75/115 (65%), Gaps = 9/115 (7%)
Query: 190 RLLRIRGEGST--KFADV-YYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQIP 246
+ LR+R G FA YY +P+G+KLRS+VEI +Y LE+P+Y GV ++QFSFQIP
Sbjct: 5 KFLRLRSIGWNLGHFAVCWYYTSPTGRKLRSLVEIDRYLLENPDYVAQGVTLTQFSFQIP 64
Query: 247 KPLQENYVRKRVPKAHTSHD-----TPKALEPRAVSPLSWVSPDNFTDLQLGRPA 296
+PL+++YV+KR PK +D T K+++P VSP++W +P + + G A
Sbjct: 65 RPLRQDYVKKR-PKIVNPNDEASVVTTKSVKPEEVSPIAWAAPSVHQEGEAGERA 118
>gi|312283175|dbj|BAJ34453.1| unnamed protein product [Thellungiella halophila]
Length = 106
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 9/112 (8%)
Query: 141 VLENPFTCEKAREWRPDVSCDDPTDISQDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGST 200
+LE+PF+C+K VSC DP D+ D SR W IDKP + + P G++R L +R + S
Sbjct: 1 MLEDPFSCDKKH-----VSCQDPADLDYDSSRTWVIDKPGLPKTPKGFKRSLVLRKDYSK 55
Query: 201 KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQIPKPLQEN 252
D YY P+GKKLRS E+ Y +PE+ A + F+F +PK +++
Sbjct: 56 --MDTYYITPTGKKLRSRNEVASYVEANPEFKNA--PLGDFTFTVPKVMEDT 103
>gi|297832688|ref|XP_002884226.1| hypothetical protein ARALYDRAFT_900454 [Arabidopsis lyrata subsp.
lyrata]
gi|297330066|gb|EFH60485.1| hypothetical protein ARALYDRAFT_900454 [Arabidopsis lyrata subsp.
lyrata]
Length = 139
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 18/148 (12%)
Query: 112 VGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDG- 170
+ ++ QC C K R + ++EKYE+IR F C SC++P D+ +
Sbjct: 5 IDSYAAQCWKCLKVRYVESQEKYEDIRSETPNKSFECR---------SCEEPGDVDMNFD 55
Query: 171 --SRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYY--EAPSGKKLRSMVEIQKYFL 226
+ W D+ I + P G +R+L +R G ADVYY EAP K+L+ ++ K+
Sbjct: 56 SPAVRWFQDRHGIPKTPQGLKRILVVRRSGEK--ADVYYQTEAPKRKRLKCFKDVTKFIE 113
Query: 227 EHPEYARAGVKMSQFSFQIPKPLQENYV 254
++ ++ +K+ + SF PK +++ V
Sbjct: 114 DNEQF--KDMKIEEVSFAAPKRMKKKKV 139
>gi|18411327|ref|NP_567177.1| methyl-CPG-binding domain 3 protein [Arabidopsis thaliana]
gi|75339279|sp|Q4PSK1.1|MBD3_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 3;
Short=AtMBD3; Short=MBD03; AltName:
Full=Methyl-CpG-binding protein MBD3
gi|67633718|gb|AAY78783.1| methyl-CpG-binding domain-containing protein [Arabidopsis thaliana]
gi|332656474|gb|AEE81874.1| methyl-CPG-binding domain 3 protein [Arabidopsis thaliana]
Length = 163
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 16/136 (11%)
Query: 112 VGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKAREWRPDVSCDDPTDISQDGS 171
+ ++ QC C K R I ++E YEEIR LE F C++ C++P D+ +
Sbjct: 9 IDSYAAQCWKCLKVRSIESQEDYEEIRSKTLEKFFECKR---------CEEPGDMVMNFD 59
Query: 172 RL---WAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYE--APSGKKLRSMVEIQKYFL 226
L W D+ +I + P G +R+L +R DVYYE AP K+ +S+ E+ +
Sbjct: 60 SLTMRWFQDEHSIPKTPQGLKRVLVVRTNCVK--VDVYYESLAPRRKRFKSIKEVATFIE 117
Query: 227 EHPEYARAGVKMSQFS 242
+ E+ ++ F+
Sbjct: 118 DKEEFKDMTLEEVSFA 133
>gi|223946381|gb|ACN27274.1| unknown [Zea mays]
gi|414875793|tpg|DAA52924.1| TPA: hypothetical protein ZEAMMB73_400686 [Zea mays]
Length = 247
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 6/67 (8%)
Query: 223 KYFLEHPEYARAGVKMSQFSFQIPKPLQENYVRKRVPKAHTSHD-----TPKALEPRAVS 277
++ E+PEY GV ++QFSFQIP PL+++YV+K+ PK + D T K+ EP V+
Sbjct: 130 RFLQENPEYVAQGVTLAQFSFQIPIPLRQDYVKKK-PKLINASDEASTITSKSSEPDEVN 188
Query: 278 PLSWVSP 284
P++W P
Sbjct: 189 PIAWAVP 195
>gi|134285530|gb|ABO69710.1| MBD4 [Triticum aestivum]
Length = 99
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAG 235
+DKP I +PPP +RL+ +R + S D YY P+GK+ RS +++K+ E+PEY RA
Sbjct: 1 MDKPGIPRPPPATKRLVIMRRDLSK--MDTYYLLPNGKRARSGNDVEKFLQENPEY-RAN 57
Query: 236 VKMSQFSFQIPK 247
+ S+FSF PK
Sbjct: 58 LPASKFSFATPK 69
>gi|91940124|gb|ABE66398.1| DNA binding protein [Striga asiatica]
Length = 102
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 235 GVKMSQFSFQIPKPLQENYVRKRVPKAHTSHDTPKALEPRAVSPLSWVSPDNFTDLQLGR 294
GV +S+FSFQ PKPL++NY+RKR + ++DT A V P+SWV P+ DLQL
Sbjct: 2 GVSLSRFSFQTPKPLRDNYLRKRPAQDALNNDT-GANGISQVQPISWVGPEVGKDLQLSG 60
Query: 295 PA 296
P
Sbjct: 61 PG 62
>gi|134285532|gb|ABO69711.1| MBD5 [Triticum aestivum]
Length = 90
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAG 235
+DK I PPP +RL+ +R + S D YY P+GK++RS +++K+ E+PEY R
Sbjct: 1 MDKAGIPCPPPVTERLVIMRRDLSK--MDTYYLLPNGKRVRSGGDVEKFLQENPEY-RVN 57
Query: 236 VKMSQFSFQIPKPLQENYVR---KRVPKAH 262
+ S+FSF +PK + V +RV KA
Sbjct: 58 LPASKFSFAMPKTVPATVVESSLRRVAKAE 87
>gi|303275850|ref|XP_003057219.1| methyl binding domain protein [Micromonas pusilla CCMP1545]
gi|226461571|gb|EEH58864.1| methyl binding domain protein [Micromonas pusilla CCMP1545]
Length = 293
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 21/124 (16%)
Query: 104 TQSRVLPSVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEK-AREWRPDVSCDD 162
T+ R G +QC C KWR P E + + +TC++ A RP + C
Sbjct: 69 TKFRTTERDGYGWLQCDSCQKWRYAP---------ETCVTDKWTCDQMADPRRPGIDCAS 119
Query: 163 PTDIS-QDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEI 221
P D G+ + PP GW+R + R ST AD YY +P GK++RS ++
Sbjct: 120 PEDAPPHVGA--------GVPAPPEGWRREVIPRR--STLGADAYYYSPCGKRMRSKPDV 169
Query: 222 QKYF 225
Q++
Sbjct: 170 QRFL 173
>gi|195999462|ref|XP_002109599.1| hypothetical protein TRIADDRAFT_53787 [Trichoplax adhaerens]
gi|190587723|gb|EDV27765.1| hypothetical protein TRIADDRAFT_53787 [Trichoplax adhaerens]
Length = 1866
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 172 RLWAIDKPNIAQP-PPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPE 230
RL ++D+ +I P GW+R R+R G DVYY AP GKKLR ++ KY ++
Sbjct: 438 RLQSVDEDDIQLPLDQGWRRQTRLRRVGRNLRGDVYYFAPCGKKLRIYPDVTKYLRKN-- 495
Query: 231 YARAGVKMSQFSF 243
+ + + + FSF
Sbjct: 496 -SISDLNLENFSF 507
>gi|51703367|gb|AAH80900.1| mbd1 protein [Xenopus (Silurana) tropicalis]
Length = 640
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Query: 186 PGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQ 244
PGW+R + +R G S D YY++P+G+K+RS +E+ KYF + + V ++ F F+
Sbjct: 21 PGWKRRIAVRKSGVSCGHTDTYYKSPTGEKIRSRIELAKYF----DALGSSVDLTLFDFR 76
>gi|340381059|ref|XP_003389039.1| PREDICTED: methyl-CpG-binding domain protein 2-like [Amphimedon
queenslandica]
Length = 319
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
P GW+R + +R G S DVYY +P GKK RS +I ++ +H + ++ F F
Sbjct: 17 PSGWRREIVVRKNGMSAGKTDVYYYSPCGKKFRSKPQIARFLGDHAD-------LTCFDF 69
Query: 244 QIPKPLQENYVRK---RVPKAHTSHDTPKALEPRAVSPLSW 281
L + R+ R P+ P+ + P++V PLS
Sbjct: 70 SRAGSLGDGTRRRARDRNPQGTVKRFDPRHIVPQSVRPLSL 110
>gi|301628286|ref|XP_002943288.1| PREDICTED: methyl-CpG-binding domain protein 1 [Xenopus (Silurana)
tropicalis]
Length = 601
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 186 PGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQ 244
PGW+R + +R G S D YY++P+G+K+RS +E+ KYF + V ++ F F+
Sbjct: 13 PGWKRRIAVRKSGVSCGHTDTYYKSPTGEKIRSRIELAKYF----NALGSSVDLTLFDFR 68
>gi|113205660|ref|NP_001037916.1| methyl-CpG binding domain protein 4 [Xenopus (Silurana) tropicalis]
gi|89272695|emb|CAJ81414.1| methyl-CpG binding domain protein 4 [Xenopus (Silurana) tropicalis]
Length = 472
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 181 IAQPPPGWQRLLRIRGEGSTKFA-DVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMS 239
I P GW+R+++ R G T DVY+ +P G LRS + + KY + E +K+
Sbjct: 49 IRSLPHGWKRIVKQRQSGKTSGKYDVYFVSPQGTTLRSRISLAKYLNNNKE---INLKLE 105
Query: 240 QFSFQIPKPLQENYVRKRVPKAHT-SHDTPKALE 272
F F +P Q+ +K + D +A+E
Sbjct: 106 DFDFSVPDQSQKQRTKKETYRGRNEGRDQKEAIE 139
>gi|89271297|emb|CAJ82703.1| l-CpG binding domain protein 1 [Xenopus (Silurana) tropicalis]
Length = 380
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 186 PGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYF 225
PGW+R + +R G S D YY++P+G+K+RS +E+ KYF
Sbjct: 13 PGWKRRIAVRKSGVSCGHTDTYYKSPTGEKIRSRIELAKYF 53
>gi|60097955|ref|NP_001012403.1| methyl-CpG-binding domain protein 2 [Gallus gallus]
gi|58450101|gb|AAW78400.1| methyl-CpG-binding domain protein 2 [Gallus gallus]
Length = 257
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 12/89 (13%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 13 PPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGN-------AVDLSCFDF 65
Query: 244 Q----IPKPLQENYVRKRVPKAHTSHDTP 268
+ +P LQ+N R R H + P
Sbjct: 66 RTGKMMPSKLQKNKQRLRNESLHPNKGKP 94
>gi|116487716|gb|AAI26018.1| LOC779091 protein [Xenopus laevis]
Length = 612
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 8/60 (13%)
Query: 186 PGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQ 244
PGW+R + +R G S D+YY +P+G+++RS +E+ KY + V +S F F+
Sbjct: 52 PGWKRRISVRKSGASCGHIDIYYRSPTGEQMRSKIELAKYL-------GSSVDLSLFDFR 104
>gi|169234846|ref|NP_001108497.1| methyl-CpG-binding domain protein 2 [Rattus norvegicus]
gi|165970773|gb|AAI58878.1| Mbd2 protein [Rattus norvegicus]
Length = 412
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 157 PPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGN-------AVDLSSFDF 209
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 210 RTGKMMPSKLQKNKQRLR 227
>gi|3800795|gb|AAC68872.1| methyl-CpG binding protein MBD2 [Mus musculus]
gi|5739188|gb|AAD50372.1| methyl-CpG binding protein 2 [Mus musculus]
gi|37572285|gb|AAH46607.2| Methyl-CpG binding domain protein 2 [Mus musculus]
gi|148677619|gb|EDL09566.1| methyl-CpG binding domain protein 2, isoform CRA_b [Mus musculus]
Length = 414
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 159 PPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGN-------AVDLSSFDF 211
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 212 RTGKMMPSKLQKNKQRLR 229
>gi|218931229|ref|NP_034903.2| methyl-CpG-binding domain protein 2 [Mus musculus]
gi|341940941|sp|Q9Z2E1.2|MBD2_MOUSE RecName: Full=Methyl-CpG-binding domain protein 2; AltName:
Full=Methyl-CpG-binding protein MBD2
Length = 414
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 159 PPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGN-------AVDLSSFDF 211
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 212 RTGKMMPSKLQKNKQRLR 229
>gi|149064588|gb|EDM14791.1| rCG46680, isoform CRA_b [Rattus norvegicus]
Length = 447
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 192 PPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGN-------AVDLSSFDF 244
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 245 RTGKMMPSKLQKNKQRLR 262
>gi|160420127|ref|NP_001104183.1| methyl-CpG binding domain protein 1 [Xenopus laevis]
gi|159155455|gb|AAI54959.1| LOC779091 protein [Xenopus laevis]
Length = 626
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 8/60 (13%)
Query: 186 PGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQ 244
PGW+R + +R G S D+YY +P+G+++RS +E+ KY + V +S F F+
Sbjct: 13 PGWKRRISVRKSGASCGHIDIYYRSPTGEQMRSKIELAKYL-------GSSVDLSLFDFR 65
>gi|301757743|ref|XP_002914722.1| PREDICTED: methyl-CpG-binding domain protein 2-like [Ailuropoda
melanoleuca]
Length = 330
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 74 PPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNT-------VDLSSFDF 126
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 127 RTGKMMPSKLQKNKQRLR 144
>gi|402903150|ref|XP_003914441.1| PREDICTED: methyl-CpG-binding domain protein 2 [Papio anubis]
Length = 412
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 157 PPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNT-------VDLSSFDF 209
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 210 RTGKMMPSKLQKNKQRLR 227
>gi|109122247|ref|XP_001082249.1| PREDICTED: methyl-CpG-binding domain protein 2 [Macaca mulatta]
Length = 412
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 157 PPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNT-------VDLSSFDF 209
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 210 RTGKMMPSKLQKNKQRLR 227
>gi|426386009|ref|XP_004059488.1| PREDICTED: methyl-CpG-binding domain protein 2 [Gorilla gorilla
gorilla]
Length = 411
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 156 PPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNT-------VDLSSFDF 208
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 209 RTGKMMPSKLQKNKQRLR 226
>gi|4505117|ref|NP_003918.1| methyl-CpG-binding domain protein 2 isoform 1 [Homo sapiens]
gi|50401198|sp|Q9UBB5.1|MBD2_HUMAN RecName: Full=Methyl-CpG-binding domain protein 2; AltName:
Full=Demethylase; Short=DMTase; AltName:
Full=Methyl-CpG-binding protein MBD2
gi|3800793|gb|AAC68871.1| methyl-CpG binding protein MBD2 [Homo sapiens]
gi|5929756|gb|AAD56597.1| methyl-CpG binding protein 2 [Homo sapiens]
gi|21595776|gb|AAH32638.1| Methyl-CpG binding domain protein 2 [Homo sapiens]
gi|119583401|gb|EAW62997.1| methyl-CpG binding domain protein 2, isoform CRA_a [Homo sapiens]
Length = 411
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 156 PPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNT-------VDLSSFDF 208
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 209 RTGKMMPSKLQKNKQRLR 226
>gi|281351227|gb|EFB26811.1| hypothetical protein PANDA_002637 [Ailuropoda melanoleuca]
Length = 287
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 31 PPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNT-------VDLSSFDF 83
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 84 RTGKMMPSKLQKNKQRLR 101
>gi|148225943|ref|NP_001080512.1| methyl-CpG binding domain protein 1 [Xenopus laevis]
gi|27694795|gb|AAH43835.1| Mbd1-prov protein [Xenopus laevis]
Length = 321
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 8/60 (13%)
Query: 186 PGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQ 244
PGW+R +R G+T +D YY +P+GKK+RS +E+ KY + V +S F F+
Sbjct: 13 PGWKRRNVVRKSGATCGHSDTYYRSPAGKKIRSRIELAKYL-------GSAVDLSFFDFR 65
>gi|126320765|ref|XP_001362190.1| PREDICTED: methyl-CpG-binding domain protein 2-like [Monodelphis
domestica]
Length = 416
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 161 PPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNT-------VDLSSFDF 213
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 214 RTGKMMPSKLQKNKQRLR 231
>gi|403268200|ref|XP_003926168.1| PREDICTED: methyl-CpG-binding domain protein 2, partial [Saimiri
boliviensis boliviensis]
Length = 283
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 28 PPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNT-------VDLSSFDF 80
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 81 RTGKMMPSKLQKNKQRLR 98
>gi|380798437|gb|AFE71094.1| methyl-CpG-binding domain protein 2 isoform 1, partial [Macaca
mulatta]
Length = 276
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 21 PPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNT-------VDLSSFDF 73
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 74 RTGKMMPSKLQKNKQRLR 91
>gi|431896183|gb|ELK05599.1| Methyl-CpG-binding domain protein 2 [Pteropus alecto]
Length = 262
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 7 PPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNT-------VDLSSFDF 59
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 60 RTGKMMPSKLQKNKQRLR 77
>gi|397514153|ref|XP_003827361.1| PREDICTED: methyl-CpG-binding domain protein 2 [Pan paniscus]
Length = 376
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 121 PPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNT-------VDLSSFDF 173
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 174 RTGKMMPSKLQKNKQRLR 191
>gi|395830852|ref|XP_003788528.1| PREDICTED: methyl-CpG-binding domain protein 2 [Otolemur garnettii]
Length = 405
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 150 PPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNT-------VDLSSFDF 202
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 203 RTGKMMPSKLQKNKQRLR 220
>gi|344269858|ref|XP_003406764.1| PREDICTED: methyl-CpG-binding domain protein 2-like [Loxodonta
africana]
Length = 348
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 93 PPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNT-------VDLSSFDF 145
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 146 RTGKMMPSKLQKNKQRLR 163
>gi|410052700|ref|XP_512139.4| PREDICTED: methyl-CpG-binding domain protein 2 isoform 3 [Pan
troglodytes]
Length = 487
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 232 PPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNT-------VDLSSFDF 284
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 285 RTGKMMPSKLQKNKQRLR 302
>gi|291394391|ref|XP_002713528.1| PREDICTED: methyl-CpG binding domain protein 2 [Oryctolagus
cuniculus]
Length = 310
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 55 PPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNT-------VDLSSFDF 107
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 108 RTGKMMPSKLQKNKQRLR 125
>gi|194214687|ref|XP_001499825.2| PREDICTED: methyl-CpG-binding domain protein 2-like [Equus
caballus]
Length = 337
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 82 PPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYL-------GNTVDLSSFDF 134
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 135 RTGKMMPSKLQKNKQRLR 152
>gi|327280386|ref|XP_003224933.1| PREDICTED: methyl-CpG-binding domain protein 4-like [Anolis
carolinensis]
Length = 530
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 185 PPGWQRLLRIRGEGSTKFA-DVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
P GW+R+++ R G T D+Y+ +P GKKLRS + YF ++ E G+K+ F F
Sbjct: 66 PEGWERIVKQRQAGKTAGKYDIYFVSPQGKKLRSKHALLDYFKKNRE---TGLKLEDFDF 122
>gi|357502293|ref|XP_003621435.1| hypothetical protein MTR_7g013320 [Medicago truncatula]
gi|355496450|gb|AES77653.1| hypothetical protein MTR_7g013320 [Medicago truncatula]
Length = 123
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 14/77 (18%)
Query: 175 AIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
IDKPNI++ P G++R L +R + S D YY P+G+KLR+ E +
Sbjct: 58 VIDKPNISKTPQGFKRTLVLRNDYSK--LDSYYITPTGEKLRARNE------------PS 103
Query: 235 GVKMSQFSFQIPKPLQE 251
GV S F F K +Q+
Sbjct: 104 GVSASDFDFSSQKIMQD 120
>gi|149064587|gb|EDM14790.1| rCG46680, isoform CRA_a [Rattus norvegicus]
Length = 278
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 192 PPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGN-------AVDLSSFDF 244
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 245 RTGKMMPSKLQKNKQRLR 262
>gi|296222685|ref|XP_002757298.1| PREDICTED: methyl-CpG-binding domain protein 2, partial [Callithrix
jacchus]
Length = 299
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 44 PPGWKKEEVIRKFGLSVGKSDVYYFSPSGKKFRSKPQLARYLGNT-------VDLSSFDF 96
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 97 RTGKMMPSKLQKNKQRLR 114
>gi|3800799|gb|AAC68874.1| testis specific methyl-CpG binding protein MBD2 [Mus musculus]
gi|5739189|gb|AAD50373.1| testis-specific methyl-CpG binding protein 2 [Mus musculus]
gi|148677618|gb|EDL09565.1| methyl-CpG binding domain protein 2, isoform CRA_a [Mus musculus]
Length = 249
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 159 PPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGN-------AVDLSSFDF 211
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 212 RTGKMMPSKLQKNKQRLR 229
>gi|7710145|ref|NP_056647.1| methyl-CpG-binding domain protein 2 testis-specific isoform [Homo
sapiens]
gi|5929755|gb|AAD56596.1| testis-specific methyl-CpG binding protein 2 [Homo sapiens]
gi|119583402|gb|EAW62998.1| methyl-CpG binding domain protein 2, isoform CRA_b [Homo sapiens]
gi|119583403|gb|EAW62999.1| methyl-CpG binding domain protein 2, isoform CRA_b [Homo sapiens]
Length = 302
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 156 PPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNT-------VDLSSFDF 208
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 209 RTGKMMPSKLQKNKQRLR 226
>gi|440799087|gb|ELR20148.1| MethylCpG binding domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 691
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 187 GWQRLLRIRGEGSTK--FADVYYEAPSGKKLRSMVEIQKYFLE 227
GW R + R G+T DVYY AP GKKLRS VE+ +Y ++
Sbjct: 228 GWTREVVTRQSGATAKIRKDVYYHAPDGKKLRSRVEVGRYLVQ 270
>gi|255088019|ref|XP_002505932.1| methyl binding domain protein [Micromonas sp. RCC299]
gi|226521203|gb|ACO67190.1| methyl binding domain protein [Micromonas sp. RCC299]
Length = 232
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 181 IAQPPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF-LEHPEYARAGVKMS 239
+ PP GW+R + R S + AD YY +P GK++RS ++Q++ + PE V +
Sbjct: 76 VVPPPEGWRREVIPRK--SVQGADAYYYSPCGKRMRSKPDVQRFLDKKRPEGKYTDVTID 133
Query: 240 QFSF 243
QF F
Sbjct: 134 QFDF 137
>gi|410903269|ref|XP_003965116.1| PREDICTED: methyl-CpG-binding domain protein 2-like [Takifugu
rubripes]
Length = 265
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 70/168 (41%), Gaps = 37/168 (22%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V + F F
Sbjct: 12 PPGWKKEEVIRKSGLSAGKSDVYYYSPSGKKFRSKPQLSRYLGN-------AVDLGCFDF 64
Query: 244 Q----IPKPLQENYVRKRVPKAHTSHDTPKALEPRAVSPLSWV---SPDNFTDLQLGRPA 296
+ +P LQ+N R R HD PLS PD T L + + A
Sbjct: 65 RTGKMMPGKLQKNKQRFR-------HD-----------PLSLAKGGKPDLNTALPIRQTA 106
Query: 297 -LPAPPVEAPISDPNPRPAKQARRA---PKQMYSGSPISSDHKFRAEE 340
+ PV S P + ++RA PKQ++ + H E
Sbjct: 107 SIFKQPVTKVTSHPGNKVKMDSQRAFDQPKQLFWERRLKGLHSLDVTE 154
>gi|323450793|gb|EGB06672.1| hypothetical protein AURANDRAFT_65286 [Aureococcus anophagefferens]
Length = 1993
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 184 PPPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAG---VKMSQ 240
P PGW R L R G D YY P G +LRS ++++YF +P+ + G + SQ
Sbjct: 998 PAPGWYRELVPRRSGDK--VDAYYYPPDGTQLRSRPDVRRYFEGNPDAVKVGDVVLDTSQ 1055
Query: 241 FSFQIPK 247
F F K
Sbjct: 1056 FQFAYSK 1062
>gi|281348710|gb|EFB24294.1| hypothetical protein PANDA_020519 [Ailuropoda melanoleuca]
Length = 576
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPKP 248
K + PKP
Sbjct: 63 DFKQGILCYPAPKP 76
>gi|440902692|gb|ELR53450.1| Methyl-CpG-binding domain protein 2, partial [Bos grunniens mutus]
Length = 255
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 12/77 (15%)
Query: 186 PGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQ 244
PGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F+
Sbjct: 1 PGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNT-------VDLSSFDFR 53
Query: 245 ----IPKPLQENYVRKR 257
+P LQ+N R R
Sbjct: 54 TGKMMPSKLQKNKQRLR 70
>gi|348505486|ref|XP_003440292.1| PREDICTED: methyl-CpG-binding domain protein 2-like [Oreochromis
niloticus]
Length = 265
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V ++ F F
Sbjct: 12 PPGWKKEEVIRKSGLSAGKSDVYYYSPSGKKFRSKPQLSRYLGNT-------VDLACFDF 64
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 65 RTGKMMPGKLQKNKQRFR 82
>gi|297793491|ref|XP_002864630.1| hypothetical protein ARALYDRAFT_919168 [Arabidopsis lyrata subsp.
lyrata]
gi|297310465|gb|EFH40889.1| hypothetical protein ARALYDRAFT_919168 [Arabidopsis lyrata subsp.
lyrata]
Length = 233
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 185 PPGWQRLLRIRGEGSTKFA--DVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVK 237
PPGW+ +IR G+T + YYE +G+K RS E+ Y+LEH R G K
Sbjct: 89 PPGWRVEDKIRTSGATAGSVDKYYYEPNTGRKFRSRTEVL-YYLEHGTSKRGGTK 142
>gi|349605676|gb|AEQ00832.1| Methyl-CpG-binding domain protein 2-like protein, partial [Equus
caballus]
Length = 255
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 12/77 (15%)
Query: 186 PGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQ 244
PGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F+
Sbjct: 1 PGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNT-------VDLSSFDFR 53
Query: 245 ----IPKPLQENYVRKR 257
+P LQ+N R R
Sbjct: 54 TGKMMPSKLQKNKQRLR 70
>gi|301789485|ref|XP_002930161.1| PREDICTED: methyl-CpG-binding domain protein 1-like [Ailuropoda
melanoleuca]
Length = 643
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPKP 248
K + PKP
Sbjct: 63 DFKQGILCYPAPKP 76
>gi|47210325|emb|CAF91173.1| unnamed protein product [Tetraodon nigroviridis]
Length = 290
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V ++ F F
Sbjct: 12 PPGWKKEEVIRKSGLSAGKSDVYYYSPSGKKFRSKPQLSRYLGN-------AVDLACFDF 64
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ++ R R
Sbjct: 65 RTGKMMPGKLQKSKQRLR 82
>gi|198433790|ref|XP_002126130.1| PREDICTED: similar to Bromodomain adjacent to zinc finger domain
protein 2B (hWALp4) [Ciona intestinalis]
Length = 2355
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
GW+R +RI+ GS DV Y KKLR + ++ KY E G+ ++ FSF
Sbjct: 703 GWKREIRIKYSGSEWQGDVVYVNQETKKLRCLADVSKYL---EETGGHGLSINNFSF 756
>gi|432950889|ref|XP_004084660.1| PREDICTED: methyl-CpG-binding domain protein 2-like [Oryzias
latipes]
Length = 261
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +P+GKK RS ++ +Y V ++ F F
Sbjct: 13 PPGWKKEEVIRKSGLSAGKSDVYYYSPTGKKFRSKPQLARYLGNT-------VDLACFDF 65
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 66 RTGKMMPGKLQKNKQRLR 83
>gi|449670049|ref|XP_002168970.2| PREDICTED: uncharacterized protein LOC100214210 [Hydra
magnipapillata]
Length = 1465
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 9/63 (14%)
Query: 187 GWQRLLRIR----GEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFS 242
GW+R R+R GEG DVYY +P GKKLR+ EI Y +++ +++ FS
Sbjct: 963 GWRRQTRLRPVNNGEGLR--GDVYYYSPCGKKLRTYPEINSYMIKN---EITDLQLDYFS 1017
Query: 243 FQI 245
F +
Sbjct: 1018 FSM 1020
>gi|148677585|gb|EDL09532.1| methyl-CpG binding domain protein 1, isoform CRA_c [Mus musculus]
Length = 569
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 186 PGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQ 244
PGW+R R G++ +D+YY++P+G+K+RS VE+ +Y + +
Sbjct: 13 PGWKRRESFRKSGASFGRSDIYYQSPTGEKIRSKVELTRYLGPACDLTLFDFRQGTLCHP 72
Query: 245 IPK 247
IPK
Sbjct: 73 IPK 75
>gi|148677584|gb|EDL09531.1| methyl-CpG binding domain protein 1, isoform CRA_b [Mus musculus]
Length = 556
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 186 PGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQ 244
PGW+R R G++ +D+YY++P+G+K+RS VE+ +Y + +
Sbjct: 13 PGWKRRESFRKSGASFGRSDIYYQSPTGEKIRSKVELTRYLGPACDLTLFDFRQGTLCHP 72
Query: 245 IPK 247
IPK
Sbjct: 73 IPK 75
>gi|358418734|ref|XP_003584033.1| PREDICTED: methyl-CpG-binding domain protein 2 [Bos taurus]
Length = 149
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW+ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 7 PPGWKIEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGN-------TVDLSSFDF 59
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 60 RTGKMMPSKLQKNKQRLR 77
>gi|148677586|gb|EDL09533.1| methyl-CpG binding domain protein 1, isoform CRA_d [Mus musculus]
Length = 520
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 186 PGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQ 244
PGW+R R G++ +D+YY++P+G+K+RS VE+ +Y + +
Sbjct: 13 PGWKRRESFRKSGASFGRSDIYYQSPTGEKIRSKVELTRYLGPACDLTLFDFRQGTLCHP 72
Query: 245 IPK 247
IPK
Sbjct: 73 IPK 75
>gi|157817372|ref|NP_038622.2| methyl-CpG-binding domain protein 1 [Mus musculus]
gi|12835923|dbj|BAB23419.1| unnamed protein product [Mus musculus]
Length = 588
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 186 PGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQ 244
PGW+R R G++ +D+YY++P+G+K+RS VE+ +Y + +
Sbjct: 13 PGWKRRESFRKSGASFGRSDIYYQSPTGEKIRSKVELTRYLGPACDLTLFDFRQGTLCHP 72
Query: 245 IPK 247
IPK
Sbjct: 73 IPK 75
>gi|74224160|dbj|BAE33700.1| unnamed protein product [Mus musculus]
Length = 580
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 186 PGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQ 244
PGW+R R G++ +D+YY++P+G+K+RS VE+ +Y + +
Sbjct: 13 PGWKRRESFRKSGASFGRSDIYYQSPTGEKIRSKVELTRYLGPACDLTLFDFRQGTLCHP 72
Query: 245 IPK 247
IPK
Sbjct: 73 IPK 75
>gi|148677583|gb|EDL09530.1| methyl-CpG binding domain protein 1, isoform CRA_a [Mus musculus]
Length = 572
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 186 PGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQ 244
PGW+R R G++ +D+YY++P+G+K+RS VE+ +Y + +
Sbjct: 13 PGWKRRESFRKSGASFGRSDIYYQSPTGEKIRSKVELTRYLGPACDLTLFDFRQGTLCHP 72
Query: 245 IPK 247
IPK
Sbjct: 73 IPK 75
>gi|158523333|sp|Q9Z2E2.2|MBD1_MOUSE RecName: Full=Methyl-CpG-binding domain protein 1; AltName:
Full=Methyl-CpG-binding protein MBD1
Length = 636
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 186 PGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQ 244
PGW+R R G++ +D+YY++P+G+K+RS VE+ +Y + +
Sbjct: 13 PGWKRRESFRKSGASFGRSDIYYQSPTGEKIRSKVELTRYLGPACDLTLFDFRQGTLCHP 72
Query: 245 IPK 247
IPK
Sbjct: 73 IPK 75
>gi|47122682|gb|AAH69837.1| Mbd1 protein [Mus musculus]
Length = 588
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 186 PGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQ 244
PGW+R R G++ +D+YY++P+G+K+RS VE+ +Y + +
Sbjct: 13 PGWKRRESFRKSGASFGRSDIYYQSPTGEKIRSKVELTRYLGPACDLTLFDFRQGTLCHP 72
Query: 245 IPK 247
IPK
Sbjct: 73 IPK 75
>gi|148677588|gb|EDL09535.1| methyl-CpG binding domain protein 1, isoform CRA_f [Mus musculus]
Length = 636
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 186 PGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
PGW+R R G++ +D+YY++P+G+K+RS VE+ +Y
Sbjct: 13 PGWKRRESFRKSGASFGRSDIYYQSPTGEKIRSKVELTRYL 53
>gi|148677587|gb|EDL09534.1| methyl-CpG binding domain protein 1, isoform CRA_e [Mus musculus]
Length = 628
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 186 PGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
PGW+R R G++ +D+YY++P+G+K+RS VE+ +Y
Sbjct: 13 PGWKRRESFRKSGASFGRSDIYYQSPTGEKIRSKVELTRYL 53
>gi|115644418|ref|XP_792656.2| PREDICTED: methyl-CpG-binding domain protein 2-like
[Strongylocentrotus purpuratus]
gi|192759055|gb|ACF05485.1| methyl-CpG-binding domain type 2/3 [Hemicentrotus pulcherrimus]
Length = 274
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 15/103 (14%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
P GW+R IR G S DVYY +P GKKLRS ++ ++ + + +S F F
Sbjct: 28 PAGWKREEVIRKSGLSAGKTDVYYYSPCGKKLRSKPQLARFIGD-------AIDLSAFDF 80
Query: 244 QIPKPLQENYVR-KRVPKAH------TSHDTPKALEPRAVSPL 279
+ K L + KR+ H T HD L R + +
Sbjct: 81 RTGKLLSSGVRKSKRLKNIHFDYSRGTKHDASLVLPIRQTASI 123
>gi|5731990|gb|AAD48908.1|AF120978_1 methyl-CpG binding protein 1 [Mus musculus domesticus]
gi|3800789|gb|AAC68869.1| methyl-CpG binding protein MBD1 [Mus musculus]
Length = 636
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 186 PGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQ 244
PGW+R R G++ +D+YY++P+G+K+RS VE+ +Y + +
Sbjct: 13 PGWKRRESFRKSGASFGRSDIYYQSPTGEKIRSKVELTRYLGPACDLTLFDFRQGTLCHP 72
Query: 245 IPK 247
IPK
Sbjct: 73 IPK 75
>gi|260799457|ref|XP_002594712.1| hypothetical protein BRAFLDRAFT_122791 [Branchiostoma floridae]
gi|229279948|gb|EEN50723.1| hypothetical protein BRAFLDRAFT_122791 [Branchiostoma floridae]
Length = 1962
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 187 GWQRLLRIR--GEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GW+R RIR G G DV Y AP GKKLR+ E+Q+Y
Sbjct: 557 GWRRETRIRAIGPGGGIKGDVCYLAPCGKKLRTYPEVQRYL 597
>gi|52545889|emb|CAD39044.2| hypothetical protein [Homo sapiens]
Length = 967
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 752 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 790
>gi|291236887|ref|XP_002738372.1| PREDICTED: methyl-CpG binding domain protein 4-like [Saccoglossus
kowalevskii]
Length = 862
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 185 PPGWQR--LLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFS 242
P GW R + R G+ + K+ DVY +P GKK RS +E+ F++ + +K SQF
Sbjct: 331 PEGWTRKVVQRKSGKSAGKY-DVYILSPEGKKYRSRIELAALFMK----TNSDLKCSQFD 385
Query: 243 FQI 245
F I
Sbjct: 386 FTI 388
>gi|380015244|ref|XP_003691617.1| PREDICTED: uncharacterized protein LOC100870097 [Apis florea]
Length = 1199
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 170 GSRLWAIDKPNIAQPPP---GWQRLLRIRGEGST---KFADVYYEAPSGKKLRSMVEIQK 223
G + A+D N A P GW+R L R T + AD+YY P GKK+RS E+ +
Sbjct: 236 GKQKIAVDMSNPAFKEPFKYGWKRELVFRASTDTNLKRMADIYYYTPKGKKVRSFREVAE 295
Query: 224 YF 225
+
Sbjct: 296 FL 297
>gi|350593515|ref|XP_003133470.3| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Sus scrofa]
Length = 1986
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 751 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 789
>gi|149027169|gb|EDL82893.1| rCG41735, isoform CRA_b [Rattus norvegicus]
gi|149027171|gb|EDL82895.1| rCG41735, isoform CRA_b [Rattus norvegicus]
Length = 322
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 186 PGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYF 225
PGW+R R G S +D+YY +P+G+K+RS +E+ +Y
Sbjct: 13 PGWKRREAFRKSGASCGRSDIYYRSPTGEKIRSKIELTRYL 53
>gi|58865426|ref|NP_001011924.1| methyl-CpG-binding domain protein 1 [Rattus norvegicus]
gi|51859293|gb|AAH81932.1| Methyl-CpG binding domain protein 1 [Rattus norvegicus]
Length = 533
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 186 PGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYF 225
PGW+R R G S +D+YY +P+G+K+RS +E+ +Y
Sbjct: 13 PGWKRREAFRKSGASCGRSDIYYRSPTGEKIRSKIELTRYL 53
>gi|440898818|gb|ELR50241.1| Bromodomain adjacent to zinc finger domain protein 2B [Bos
grunniens mutus]
Length = 2166
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 750 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 788
>gi|329664076|ref|NP_001192347.1| bromodomain adjacent to zinc finger domain protein 2B [Bos taurus]
gi|296490606|tpg|DAA32719.1| TPA: bromodomain adjacent to zinc finger domain, 2B [Bos taurus]
Length = 2167
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 751 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 789
>gi|432098345|gb|ELK28145.1| Bromodomain adjacent to zinc finger domain protein 2B [Myotis
davidii]
Length = 2206
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 753 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 791
>gi|301779808|ref|XP_002925321.1| PREDICTED: bromodomain adjacent to zinc finger domain protein
2B-like [Ailuropoda melanoleuca]
Length = 2169
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 751 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 789
>gi|281337460|gb|EFB13044.1| hypothetical protein PANDA_014792 [Ailuropoda melanoleuca]
Length = 2122
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 704 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 742
>gi|426221047|ref|XP_004004723.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Ovis aries]
Length = 2167
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 751 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 789
>gi|417411861|gb|JAA52351.1| Putative methyl-cpg binding transcription regulator, partial
[Desmodus rotundus]
Length = 598
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 16/133 (12%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 23 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 79
Query: 235 GVKMSQFSFQIPKPLQENY-VRKRVP-----KAHTSHDTPKALEPRAVSPLSWVSPDNFT 288
K + PK E RKR KA P+ +E R +P D T
Sbjct: 80 DFKQGILCYPAPKAHSEAVPSRKRKKPSKPVKAGKCQVGPQRVEVRKEAPRDETKADANT 139
Query: 289 DLQLGRPA-LPAP 300
PA LPAP
Sbjct: 140 A-----PASLPAP 147
>gi|410968711|ref|XP_003990845.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B [Felis catus]
Length = 2171
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 753 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 791
>gi|351711943|gb|EHB14862.1| Bromodomain adjacent to zinc finger domain protein 2B
[Heterocephalus glaber]
Length = 2168
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 751 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 789
>gi|348585935|ref|XP_003478726.1| PREDICTED: bromodomain adjacent to zinc finger domain protein
2B-like isoform 1 [Cavia porcellus]
Length = 2170
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 753 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 791
>gi|345797221|ref|XP_856450.2| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
isoform 2 [Canis lupus familiaris]
Length = 2169
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 752 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 790
>gi|15214874|gb|AAH12576.1| BAZ2B protein [Homo sapiens]
Length = 643
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 458 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 496
>gi|297264141|ref|XP_002808049.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B-like [Macaca mulatta]
Length = 2188
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 753 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 791
>gi|431894841|gb|ELK04634.1| Bromodomain adjacent to zinc finger domain protein 2B [Pteropus
alecto]
Length = 2135
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 683 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 721
>gi|3800801|gb|AAC68875.1| testis specific methyl-CpG binding protein MBD2, partial [Homo
sapiens]
Length = 146
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 12/77 (15%)
Query: 186 PGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQ 244
PGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F+
Sbjct: 1 PGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGN-------TVDLSSFDFR 53
Query: 245 ----IPKPLQENYVRKR 257
+P LQ+N R R
Sbjct: 54 TGKMMPSKLQKNKQRLR 70
>gi|119631811|gb|EAX11406.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_c [Homo
sapiens]
Length = 2231
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 752 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 790
>gi|338728001|ref|XP_003365598.1| PREDICTED: methyl-CpG-binding domain protein 1 [Equus caballus]
Length = 652
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGVLCYPAPK 75
>gi|395846680|ref|XP_003796028.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Otolemur garnettii]
Length = 2146
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 753 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 791
>gi|332234004|ref|XP_003266198.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Nomascus leucogenys]
Length = 2167
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 751 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 789
>gi|291394371|ref|XP_002713578.1| PREDICTED: methyl-CpG binding domain protein 1 isoform 1
[Oryctolagus cuniculus]
Length = 606
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 186 PGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
PGW+R R G+T +D+YY++P+G ++RS VE+ +Y
Sbjct: 13 PGWKRREVFRKSGATCGRSDIYYQSPTGDRIRSKVELTRYL 53
>gi|344268059|ref|XP_003405881.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Loxodonta africana]
Length = 2169
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 750 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 788
>gi|291391605|ref|XP_002712247.1| PREDICTED: bromodomain adjacent to zinc finger domain, 2B
[Oryctolagus cuniculus]
Length = 2168
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 751 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 789
>gi|431896198|gb|ELK05614.1| Methyl-CpG-binding domain protein 1 [Pteropus alecto]
Length = 639
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y + +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPSCDLSLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|403258938|ref|XP_003921998.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Saimiri boliviensis boliviensis]
Length = 2170
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 753 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 791
>gi|291394375|ref|XP_002713580.1| PREDICTED: methyl-CpG binding domain protein 1 isoform 3
[Oryctolagus cuniculus]
Length = 550
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 186 PGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
PGW+R R G+T +D+YY++P+G ++RS VE+ +Y
Sbjct: 13 PGWKRREVFRKSGATCGRSDIYYQSPTGDRIRSKVELTRYL 53
>gi|194222248|ref|XP_001916271.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Equus caballus]
Length = 2170
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 752 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 790
>gi|149027168|gb|EDL82892.1| rCG41735, isoform CRA_a [Rattus norvegicus]
gi|149027170|gb|EDL82894.1| rCG41735, isoform CRA_a [Rattus norvegicus]
gi|149027172|gb|EDL82896.1| rCG41735, isoform CRA_a [Rattus norvegicus]
gi|149027173|gb|EDL82897.1| rCG41735, isoform CRA_a [Rattus norvegicus]
Length = 330
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 186 PGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYF 225
PGW+R R G S +D+YY +P+G+K+RS +E+ +Y
Sbjct: 13 PGWKRREAFRKSGASCGRSDIYYRSPTGEKIRSKIELTRYL 53
>gi|395822931|ref|XP_003784756.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 2 [Otolemur
garnettii]
Length = 593
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPECDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|390464478|ref|XP_002806959.2| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B [Callithrix jacchus]
Length = 2178
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 753 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 791
>gi|383418411|gb|AFH32419.1| methyl-CpG-binding domain protein 1 isoform 6 [Macaca mulatta]
Length = 599
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|291394373|ref|XP_002713579.1| PREDICTED: methyl-CpG binding domain protein 1 isoform 2
[Oryctolagus cuniculus]
Length = 557
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 186 PGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
PGW+R R G+T +D+YY++P+G ++RS VE+ +Y
Sbjct: 13 PGWKRREVFRKSGATCGRSDIYYQSPTGDRIRSKVELTRYL 53
>gi|149720935|ref|XP_001499360.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 1 [Equus
caballus]
Length = 546
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGVLCYPAPK 75
>gi|397500603|ref|XP_003820998.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Pan paniscus]
Length = 2168
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 752 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 790
>gi|94681063|ref|NP_038478.2| bromodomain adjacent to zinc finger domain protein 2B [Homo
sapiens]
gi|229462995|sp|Q9UIF8.3|BAZ2B_HUMAN RecName: Full=Bromodomain adjacent to zinc finger domain protein
2B; AltName: Full=hWALp4
gi|119631809|gb|EAX11404.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_b [Homo
sapiens]
gi|119631810|gb|EAX11405.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_b [Homo
sapiens]
gi|119631812|gb|EAX11407.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_b [Homo
sapiens]
gi|162319380|gb|AAI56488.1| Bromodomain adjacent to zinc finger domain, 2B [synthetic
construct]
Length = 2168
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 752 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 790
>gi|410035848|ref|XP_525949.4| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Pan troglodytes]
Length = 2198
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 749 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 787
>gi|417411980|gb|JAA52407.1| Putative methyl-cpg binding transcription regulator, partial
[Desmodus rotundus]
Length = 621
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 16/133 (12%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 23 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 79
Query: 235 GVKMSQFSFQIPKPLQENY-VRKRVP-----KAHTSHDTPKALEPRAVSPLSWVSPDNFT 288
K + PK E RKR KA P+ +E R +P D T
Sbjct: 80 DFKQGILCYPAPKAHSEAVPSRKRKKPSKPVKAGKCQVGPQRVEVRKEAPRDETKADANT 139
Query: 289 DLQLGRPA-LPAP 300
PA LPAP
Sbjct: 140 A-----PASLPAP 147
>gi|345328056|ref|XP_001512551.2| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
isoform 1 [Ornithorhynchus anatinus]
Length = 2183
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 761 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 799
>gi|410348356|gb|JAA40782.1| bromodomain adjacent to zinc finger domain, 2B [Pan troglodytes]
Length = 2176
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 751 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 789
>gi|351710467|gb|EHB13386.1| Methyl-CpG-binding domain protein 1 [Heterocephalus glaber]
Length = 622
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y + +
Sbjct: 6 LDCPALG---PGWKRREVYRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLSLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYSAPK 75
>gi|402888433|ref|XP_003907566.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B [Papio anubis]
Length = 2131
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 753 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 791
>gi|149720931|ref|XP_001499371.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 2 [Equus
caballus]
Length = 602
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGVLCYPAPK 75
>gi|6683500|dbj|BAA89212.1| bromodomain adjacent to zinc finger domain 2B [Homo sapiens]
Length = 1972
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 556 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 594
>gi|338728011|ref|XP_003365603.1| PREDICTED: methyl-CpG-binding domain protein 1 [Equus caballus]
Length = 500
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGVLCYPAPK 75
>gi|149720937|ref|XP_001499413.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 5 [Equus
caballus]
Length = 583
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGVLCYPAPK 75
>gi|126326221|ref|XP_001366439.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Monodelphis domestica]
Length = 2180
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 762 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 800
>gi|417412028|gb|JAA52430.1| Putative methyl-cpg binding transcription regulator, partial
[Desmodus rotundus]
Length = 629
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 14/132 (10%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 23 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 79
Query: 235 GVKMSQFSFQIPKPLQENY-VRKRVP-----KAHTSHDTPKALEPRAVSPLSWVSPDNFT 288
K + PK E RKR KA P+ +E R +P +
Sbjct: 80 DFKQGILCYPAPKAHSEAVPSRKRKKPSKPVKAGKCQVGPQRVEVRKEAPRD----ETKA 135
Query: 289 DLQLGRPALPAP 300
D +LPAP
Sbjct: 136 DANTAPASLPAP 147
>gi|395732421|ref|XP_002812584.2| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B [Pongo abelii]
Length = 2004
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y AP GKKLR E+ KY
Sbjct: 654 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYL 692
>gi|338728005|ref|XP_003365600.1| PREDICTED: methyl-CpG-binding domain protein 1 [Equus caballus]
Length = 571
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGVLCYPAPK 75
>gi|332236729|ref|XP_003267552.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 9 [Nomascus
leucogenys]
Length = 574
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|335279477|ref|XP_003121489.2| PREDICTED: methyl-CpG-binding domain protein 1 [Sus scrofa]
Length = 536
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y + +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLSLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|338728009|ref|XP_003365602.1| PREDICTED: methyl-CpG-binding domain protein 1 [Equus caballus]
Length = 532
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGVLCYPAPK 75
>gi|348502661|ref|XP_003438886.1| PREDICTED: methyl-CpG-binding domain protein 4-like [Oreochromis
niloticus]
Length = 385
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 185 PPGWQRLLRIRGEGSTKFA-DVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW R +R R G T DVY+ +P G++ RS ++ + LE + +S F F
Sbjct: 19 PPGWIREVRQRKAGKTAGKLDVYFTSPEGQRFRSRASLRTFLLES---GSGNLDISLFDF 75
Query: 244 QIPK 247
K
Sbjct: 76 TTSK 79
>gi|338728003|ref|XP_003365599.1| PREDICTED: methyl-CpG-binding domain protein 1 [Equus caballus]
Length = 627
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGVLCYPAPK 75
>gi|332849910|ref|XP_003315950.1| PREDICTED: uncharacterized protein LOC455418 isoform 1 [Pan
troglodytes]
gi|410221324|gb|JAA07881.1| methyl-CpG binding domain protein 1 [Pan troglodytes]
gi|410267102|gb|JAA21517.1| methyl-CpG binding domain protein 1 [Pan troglodytes]
gi|410294438|gb|JAA25819.1| methyl-CpG binding domain protein 1 [Pan troglodytes]
gi|410335985|gb|JAA36939.1| methyl-CpG binding domain protein 1 [Pan troglodytes]
Length = 655
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|323462147|ref|NP_001191065.1| methyl-CpG-binding domain protein 1 isoform 6 [Homo sapiens]
Length = 655
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|149720933|ref|XP_001499382.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 3 [Equus
caballus]
Length = 553
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGVLCYPAPK 75
>gi|383418415|gb|AFH32421.1| methyl-CpG-binding domain protein 1 isoform 6 [Macaca mulatta]
gi|384947076|gb|AFI37143.1| methyl-CpG-binding domain protein 1 isoform 6 [Macaca mulatta]
Length = 655
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|67968403|dbj|BAE00563.1| unnamed protein product [Macaca fascicularis]
Length = 566
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|403268207|ref|XP_003926170.1| PREDICTED: methyl-CpG-binding domain protein 1 [Saimiri boliviensis
boliviensis]
Length = 940
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y + +
Sbjct: 304 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLSLF 360
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 361 DFKQGILCYPAPK 373
>gi|402903118|ref|XP_003914426.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 2 [Papio
anubis]
Length = 574
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|383418417|gb|AFH32422.1| methyl-CpG-binding domain protein 1 isoform 6 [Macaca mulatta]
Length = 606
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|332849918|ref|XP_003315953.1| PREDICTED: uncharacterized protein LOC455418 isoform 4 [Pan
troglodytes]
gi|397513941|ref|XP_003827263.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 4 [Pan
paniscus]
gi|343958670|dbj|BAK63190.1| methyl-CpG-binding domain protein 1 [Pan troglodytes]
Length = 574
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|332236715|ref|XP_003267545.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 2 [Nomascus
leucogenys]
Length = 655
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|323462155|ref|NP_001191069.1| methyl-CpG-binding domain protein 1 isoform 9 [Homo sapiens]
Length = 574
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|395749868|ref|XP_003779018.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 2 [Pongo
abelii]
Length = 655
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|338728007|ref|XP_003365601.1| PREDICTED: methyl-CpG-binding domain protein 1 [Equus caballus]
Length = 557
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGVLCYPAPK 75
>gi|297275298|ref|XP_001098362.2| PREDICTED: methyl-CpG-binding domain protein 1-like isoform 1
[Macaca mulatta]
Length = 630
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|397513935|ref|XP_003827260.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 1 [Pan
paniscus]
Length = 655
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|332849916|ref|XP_512130.3| PREDICTED: uncharacterized protein LOC455418 isoform 9 [Pan
troglodytes]
gi|397513939|ref|XP_003827262.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 3 [Pan
paniscus]
Length = 630
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|323462151|ref|NP_001191067.1| methyl-CpG-binding domain protein 1 isoform 8 [Homo sapiens]
Length = 629
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|323462149|ref|NP_001191066.1| methyl-CpG-binding domain protein 1 isoform 7 [Homo sapiens]
gi|194378484|dbj|BAG63407.1| unnamed protein product [Homo sapiens]
gi|261858622|dbj|BAI45833.1| methyl-CpG binding domain protein 1 [synthetic construct]
Length = 630
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|5777946|gb|AAD51443.1|AF078831_1 methyl-CpG binding protein splice variant 2 [Homo sapiens]
Length = 586
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|410977688|ref|XP_003995233.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 2 [Felis
catus]
Length = 551
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|332236719|ref|XP_003267547.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 4 [Nomascus
leucogenys]
Length = 549
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|426385960|ref|XP_004059464.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 7 [Gorilla
gorilla gorilla]
Length = 574
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|338727999|ref|XP_003365597.1| PREDICTED: methyl-CpG-binding domain protein 1 [Equus caballus]
Length = 638
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGVLCYPAPK 75
>gi|338727997|ref|XP_003365596.1| PREDICTED: methyl-CpG-binding domain protein 1 [Equus caballus]
Length = 533
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGVLCYPAPK 75
>gi|402903116|ref|XP_003914425.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 1 [Papio
anubis]
Length = 630
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|395822929|ref|XP_003784755.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 1 [Otolemur
garnettii]
Length = 543
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPECDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|395749879|ref|XP_003779023.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 7 [Pongo
abelii]
Length = 574
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|332236727|ref|XP_003267551.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 8 [Nomascus
leucogenys]
Length = 630
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|426385952|ref|XP_004059460.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 3 [Gorilla
gorilla gorilla]
Length = 549
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|194374621|dbj|BAG62425.1| unnamed protein product [Homo sapiens]
Length = 535
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|426385950|ref|XP_004059459.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 2 [Gorilla
gorilla gorilla]
Length = 655
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|383418413|gb|AFH32420.1| methyl-CpG-binding domain protein 1 isoform 6 [Macaca mulatta]
Length = 609
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|21464115|ref|NP_056670.2| methyl-CpG-binding domain protein 1 isoform 2 [Homo sapiens]
gi|119583370|gb|EAW62966.1| methyl-CpG binding domain protein 1, isoform CRA_e [Homo sapiens]
Length = 586
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|156105673|ref|NP_056669.2| methyl-CpG-binding domain protein 1 isoform 3 [Homo sapiens]
gi|21620082|gb|AAH33242.1| Methyl-CpG binding domain protein 1 [Homo sapiens]
gi|119583366|gb|EAW62962.1| methyl-CpG binding domain protein 1, isoform CRA_a [Homo sapiens]
Length = 549
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|390473975|ref|XP_002757279.2| PREDICTED: methyl-CpG-binding domain protein 1 isoform 1
[Callithrix jacchus]
Length = 642
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|332236717|ref|XP_003267546.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 3 [Nomascus
leucogenys]
Length = 550
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|395749875|ref|XP_003779021.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 5 [Pongo
abelii]
Length = 630
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|332849922|ref|XP_003315955.1| PREDICTED: uncharacterized protein LOC455418 isoform 6 [Pan
troglodytes]
Length = 535
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|323462161|ref|NP_001191072.1| methyl-CpG-binding domain protein 1 isoform 12 [Homo sapiens]
Length = 535
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|323462163|ref|NP_001191080.1| methyl-CpG-binding domain protein 1 isoform 13 [Homo sapiens]
Length = 536
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|426385958|ref|XP_004059463.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 6 [Gorilla
gorilla gorilla]
gi|426385966|ref|XP_004059467.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 10 [Gorilla
gorilla gorilla]
Length = 630
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|5739181|gb|AAD50371.1| methyl-CpG binding protein 1 [Homo sapiens]
Length = 605
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|5777948|gb|AAD51444.1|AF078832_1 methyl-CpG binding protein splice variant 3 [Homo sapiens]
Length = 549
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|21464117|ref|NP_056671.2| methyl-CpG-binding domain protein 1 isoform 1 [Homo sapiens]
gi|323462153|ref|NP_001191068.1| methyl-CpG-binding domain protein 1 isoform 1 [Homo sapiens]
gi|50401200|sp|Q9UIS9.2|MBD1_HUMAN RecName: Full=Methyl-CpG-binding domain protein 1; AltName:
Full=CXXC-type zinc finger protein 3; AltName:
Full=Methyl-CpG-binding protein MBD1; AltName:
Full=Protein containing methyl-CpG-binding domain 1
gi|119583369|gb|EAW62965.1| methyl-CpG binding domain protein 1, isoform CRA_d [Homo sapiens]
Length = 605
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|410977692|ref|XP_003995235.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 4 [Felis
catus]
Length = 663
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|348576643|ref|XP_003474096.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein
1-like [Cavia porcellus]
Length = 633
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y + +
Sbjct: 6 LDCPALG---PGWKRREVYRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPSCDLSLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYSSPK 75
>gi|332849920|ref|XP_003315954.1| PREDICTED: uncharacterized protein LOC455418 isoform 5 [Pan
troglodytes]
gi|410221322|gb|JAA07880.1| methyl-CpG binding domain protein 1 [Pan troglodytes]
gi|410267100|gb|JAA21516.1| methyl-CpG binding domain protein 1 [Pan troglodytes]
gi|410294436|gb|JAA25818.1| methyl-CpG binding domain protein 1 [Pan troglodytes]
gi|410335983|gb|JAA36938.1| methyl-CpG binding domain protein 1 [Pan troglodytes]
Length = 605
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|332236737|ref|XP_003267556.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 13 [Nomascus
leucogenys]
Length = 656
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 32 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 88
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 89 DFKQGILCYPAPK 101
>gi|410977700|ref|XP_003995239.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 8 [Felis
catus]
Length = 576
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|297702598|ref|XP_002828265.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 1 [Pongo
abelii]
Length = 605
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|144704702|gb|ABP02056.1| methyl-CpG binding domain protein 1 variant 8 [Homo sapiens]
Length = 536
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|395749872|ref|XP_003779020.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 4 [Pongo
abelii]
Length = 586
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|332849926|ref|XP_003315957.1| PREDICTED: uncharacterized protein LOC455418 isoform 8 [Pan
troglodytes]
Length = 656
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 32 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 79
>gi|241631815|ref|XP_002410284.1| conserved hypothetical protein [Ixodes scapularis]
gi|215503366|gb|EEC12860.1| conserved hypothetical protein [Ixodes scapularis]
Length = 686
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 10/72 (13%)
Query: 176 IDKPNIAQPPPGWQRLLRIR--GEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYAR 233
D PN+ PPGW R + R G + KF DVY +P GKK RS E+Q H E
Sbjct: 25 FDDPNL---PPGWYRKVTQRQAGRSAGKF-DVYIFSPEGKKFRSRNELQA----HLEKVG 76
Query: 234 AGVKMSQFSFQI 245
+ + +S F F +
Sbjct: 77 SPLPLSNFDFTV 88
>gi|194380002|dbj|BAG58353.1| unnamed protein product [Homo sapiens]
Length = 656
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 32 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 79
>gi|124111383|gb|ABM92100.1| MBD1 [Pan troglodytes]
Length = 592
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|124054431|gb|ABM89443.1| MBD1 [Pongo pygmaeus]
Length = 592
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|55727757|emb|CAH90629.1| hypothetical protein [Pongo abelii]
Length = 605
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|5777944|gb|AAD51442.1|AF078830_1 methyl-CpG binding protein splice variant 1 [Homo sapiens]
Length = 605
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|323462159|ref|NP_001191071.1| methyl-CpG-binding domain protein 1 isoform 11 [Homo sapiens]
gi|31414478|emb|CAD92308.1| methyl-CpG binding domain protein 1, splice form 6 [Homo sapiens]
gi|119583367|gb|EAW62963.1| methyl-CpG binding domain protein 1, isoform CRA_b [Homo sapiens]
Length = 550
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|410977696|ref|XP_003995237.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 6 [Felis
catus]
Length = 505
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|357610614|gb|EHJ67065.1| putative methyl-CpG binding transcription regulator [Danaus
plexippus]
Length = 251
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
P GWQR +R G S DVYY +P+GKK RS E+ +Y + V +S F +
Sbjct: 16 PKGWQREEVVRKTGLSAGKVDVYYYSPTGKKCRSKSELVRYLGDS-------VNLSYFDY 68
Query: 244 Q 244
Q
Sbjct: 69 Q 69
>gi|332849912|ref|XP_003315951.1| PREDICTED: uncharacterized protein LOC455418 isoform 2 [Pan
troglodytes]
gi|397513937|ref|XP_003827261.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 2 [Pan
paniscus]
Length = 550
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|426385948|ref|XP_004059458.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 1 [Gorilla
gorilla gorilla]
gi|426385962|ref|XP_004059465.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 8 [Gorilla
gorilla gorilla]
Length = 605
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|7710143|ref|NP_002375.1| methyl-CpG-binding domain protein 1 isoform 4 [Homo sapiens]
gi|5777950|gb|AAD51445.1|AF078833_1 methyl-CpG binding protein splice variant 4 [Homo sapiens]
gi|119583371|gb|EAW62967.1| methyl-CpG binding domain protein 1, isoform CRA_f [Homo sapiens]
Length = 503
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|332236713|ref|XP_003267544.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 1 [Nomascus
leucogenys]
gi|332236731|ref|XP_003267553.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 10 [Nomascus
leucogenys]
Length = 605
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|297275300|ref|XP_002800978.1| PREDICTED: methyl-CpG-binding domain protein 1-like isoform 2
[Macaca mulatta]
Length = 550
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|426253820|ref|XP_004020589.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 1 [Ovis
aries]
Length = 575
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|395749877|ref|XP_003779022.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 6 [Pongo
abelii]
Length = 536
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|355701946|gb|EHH29299.1| hypothetical protein EGK_09681 [Macaca mulatta]
gi|355755028|gb|EHH58895.1| hypothetical protein EGM_08857 [Macaca fascicularis]
gi|380812826|gb|AFE78287.1| methyl-CpG-binding domain protein 1 isoform 1 [Macaca mulatta]
gi|380812830|gb|AFE78289.1| methyl-CpG-binding domain protein 1 isoform 6 [Macaca mulatta]
gi|383410407|gb|AFH28417.1| methyl-CpG-binding domain protein 1 isoform 6 [Macaca mulatta]
gi|384947074|gb|AFI37142.1| methyl-CpG-binding domain protein 1 isoform 1 [Macaca mulatta]
Length = 605
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|332236725|ref|XP_003267550.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 7 [Nomascus
leucogenys]
Length = 556
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|296222659|ref|XP_002757280.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 2
[Callithrix jacchus]
Length = 668
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 32 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 79
>gi|444728934|gb|ELW69368.1| Methyl-CpG-binding domain protein 1 [Tupaia chinensis]
Length = 598
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|410977694|ref|XP_003995236.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 5 [Felis
catus]
Length = 558
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|410977690|ref|XP_003995234.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 3 [Felis
catus]
Length = 594
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|380812828|gb|AFE78288.1| methyl-CpG-binding domain protein 1 isoform 6 [Macaca mulatta]
Length = 559
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|426385954|ref|XP_004059461.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 4 [Gorilla
gorilla gorilla]
Length = 550
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|426253822|ref|XP_004020590.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 2 [Ovis
aries]
Length = 557
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|410977686|ref|XP_003995232.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 1 [Felis
catus]
gi|410977698|ref|XP_003995238.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 7 [Felis
catus]
Length = 607
Score = 40.8 bits (94), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|332236733|ref|XP_003267554.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 11 [Nomascus
leucogenys]
Length = 567
Score = 40.8 bits (94), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|395749870|ref|XP_003779019.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 3 [Pongo
abelii]
Length = 550
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|426385956|ref|XP_004059462.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 5 [Gorilla
gorilla gorilla]
Length = 556
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|410977702|ref|XP_003995240.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 9 [Felis
catus]
gi|410977704|ref|XP_003995241.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 10 [Felis
catus]
Length = 632
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|380812832|gb|AFE78290.1| methyl-CpG-binding domain protein 1 isoform 6 [Macaca mulatta]
Length = 556
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|114050963|ref|NP_001039946.1| methyl-CpG-binding domain protein 1 [Bos taurus]
gi|86437962|gb|AAI12459.1| Methyl-CpG binding domain protein 1 [Bos taurus]
gi|296473709|tpg|DAA15824.1| TPA: methyl-CpG binding domain protein 1 [Bos taurus]
Length = 642
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|74184170|dbj|BAE37086.1| unnamed protein product [Mus musculus]
Length = 298
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 186 PGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
PGW+R R G++ +D+YY++P+G+K+RS VE+ +Y
Sbjct: 13 PGWKRRESFRKSGASFGRSDIYYQSPTGEKIRSKVELTRYL 53
>gi|21464119|ref|NP_056723.2| methyl-CpG-binding domain protein 1 isoform 5 [Homo sapiens]
gi|119583368|gb|EAW62964.1| methyl-CpG binding domain protein 1, isoform CRA_c [Homo sapiens]
Length = 556
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|2239126|emb|CAA71735.1| methyl-CpG binding protein [Homo sapiens]
Length = 556
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|440895457|gb|ELR47635.1| Methyl-CpG-binding domain protein 1 [Bos grunniens mutus]
Length = 644
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|332849924|ref|XP_003315956.1| PREDICTED: uncharacterized protein LOC455418 isoform 7 [Pan
troglodytes]
Length = 567
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|323462157|ref|NP_001191070.1| methyl-CpG-binding domain protein 1 isoform 10 [Homo sapiens]
Length = 567
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|426385964|ref|XP_004059466.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 9 [Gorilla
gorilla gorilla]
Length = 567
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|345803421|ref|XP_537343.3| PREDICTED: methyl-CpG-binding domain protein 1 [Canis lupus
familiaris]
Length = 634
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 9 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 56
>gi|443694004|gb|ELT95247.1| hypothetical protein CAPTEDRAFT_180602 [Capitella teleta]
Length = 119
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 18/100 (18%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PPGW+R +R G S DVYY +P G ++RS P+ R
Sbjct: 9 LDIPGL---PPGWRREENVRKSGLSAGKTDVYYISPDGTRVRS----------KPQLCRM 55
Query: 235 ---GVKMSQFSFQIPKPLQENYVRKRVPKAHTSHDTPKAL 271
V ++ F F+ K LQ + +RK +S+D + L
Sbjct: 56 VGDAVDLNSFDFRTGKILQSS-IRKSKRMRGSSYDFARGL 94
>gi|148223675|ref|NP_001083787.1| methyl-CpG binding domain protein 2 [Xenopus laevis]
gi|24898897|dbj|BAC23079.1| methyl-CpG binding protein MBD2 [Xenopus laevis]
Length = 267
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 12/78 (15%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
P GW++ IR G S +DVYY +P+GKK RS ++ +Y V ++ F F
Sbjct: 12 PAGWKKEEVIRKSGLSAGKSDVYYYSPNGKKFRSKPQLARYL-------GNSVDLNSFDF 64
Query: 244 Q----IPKPLQENYVRKR 257
+ +P LQ+N R R
Sbjct: 65 RTGKMMPSKLQKNKQRLR 82
>gi|405960128|gb|EKC26075.1| Methyl-CpG-binding domain protein 4 [Crassostrea gigas]
Length = 826
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 183 QPPPGWQR--LLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLE 227
Q P GW R + R+ G+ + K+ DVY +PSG+KLRS ++ +Y E
Sbjct: 188 QLPKGWTRKVVQRLSGKSAGKY-DVYIYSPSGRKLRSKTDLARYLEE 233
>gi|124013742|gb|ABM88148.1| MBD1 [Macaca nemestrina]
Length = 142
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|410899989|ref|XP_003963479.1| PREDICTED: bromodomain adjacent to zinc finger domain protein
2A-like [Takifugu rubripes]
Length = 2283
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQIP 246
GW+R +R++ + A+ +Y P G++++ EI KY +H A + V FSF
Sbjct: 890 GWKREIRVKKIENRMKAETWYYTPCGRRMKQFPEIIKYLKKH---ADSLVSREHFSFSPR 946
Query: 247 KPLQENYVRKRVPKA 261
P+ + Y + P+
Sbjct: 947 MPVGDFYEERESPEG 961
>gi|426249701|ref|XP_004018588.1| PREDICTED: methyl-CpG-binding domain protein 4 [Ovis aries]
Length = 554
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 21/148 (14%)
Query: 185 PPGWQRLLRIRGEGSTKFA-DVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
P GW+R+++ R G T DVY+ +P G+K RS V + Y + E +K F F
Sbjct: 82 PCGWERVVKQRASGKTAGKYDVYFISPQGQKFRSRVSLVNYLHQSGE---TSLKPEDFDF 138
Query: 244 QI-PKPLQENYVRKRVPKA------HTSHDTPKALEPRA-----VSPLSWVSPDNFTDLQ 291
+ PK ++ + R A H S+ + + L R+ V PL P +LQ
Sbjct: 139 SVRPKGSIKSGCKGRNTAALTFQLQHQSNSSNRNLRTRSRWKKDVFPL----PSACLELQ 194
Query: 292 LGRPALPAPPVEAPISDPNPRPAKQARR 319
+ LP + + D R ++++R
Sbjct: 195 VS-GELPNLKEDEGVHDIASRKVRKSKR 221
>gi|417406766|gb|JAA50027.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 1831
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y +P GKKLR E+ KY
Sbjct: 753 GWQRETRIRNFGGRLQGEVAYYSPCGKKLRQYPEVIKYL 791
>gi|158256470|dbj|BAF84208.1| unnamed protein product [Homo sapiens]
Length = 605
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYF 225
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y
Sbjct: 6 LDCPALG---PGWKRREVFRKPGATCGRSDTYYQSPTGDRIRSKVELTRYL 53
>gi|344249764|gb|EGW05868.1| Methyl-CpG-binding domain protein 1 [Cricetulus griseus]
Length = 330
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 186 PGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYF 225
PGW+R R G S +D+YY +P+G K+RS VE+ +Y
Sbjct: 25 PGWKRREAFRKSGASCGRSDIYYLSPTGDKIRSKVELTRYL 65
>gi|417406727|gb|JAA50008.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 1768
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y +P GKKLR E+ KY
Sbjct: 690 GWQRETRIRNFGGRLQGEVAYYSPCGKKLRQYPEVIKYL 728
>gi|417406931|gb|JAA50104.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2206
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y +P GKKLR E+ KY
Sbjct: 753 GWQRETRIRNFGGRLQGEVAYYSPCGKKLRQYPEVIKYL 791
>gi|417406362|gb|JAA49842.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 1347
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y +P GKKLR E+ KY
Sbjct: 753 GWQRETRIRNFGGRLQGEVAYYSPCGKKLRQYPEVIKYL 791
>gi|432102921|gb|ELK30351.1| Methyl-CpG-binding domain protein 1 [Myotis davidii]
Length = 589
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELIRYLGPSCDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|356508368|ref|XP_003522929.1| PREDICTED: uncharacterized protein LOC100800976 [Glycine max]
Length = 287
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 185 PPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++L + G+ K ++ + AP+G+++ + +++KY HP G +S+F +
Sbjct: 23 PPGWKKLFIPKKAGTPKKNEIVFTAPTGEEINNRKQLEKYLKAHP----GGPAVSEFDW 77
>gi|417406914|gb|JAA50097.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2143
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y +P GKKLR E+ KY
Sbjct: 690 GWQRETRIRNFGGRLQGEVAYYSPCGKKLRQYPEVIKYL 728
>gi|417406286|gb|JAA49807.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 1284
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y +P GKKLR E+ KY
Sbjct: 690 GWQRETRIRNFGGRLQGEVAYYSPCGKKLRQYPEVIKYL 728
>gi|417406900|gb|JAA50090.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2108
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y +P GKKLR E+ KY
Sbjct: 655 GWQRETRIRNFGGRLQGEVAYYSPCGKKLRQYPEVIKYL 693
>gi|417406880|gb|JAA50080.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2045
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y +P GKKLR E+ KY
Sbjct: 592 GWQRETRIRNFGGRLQGEVAYYSPCGKKLRQYPEVIKYL 630
>gi|424920765|ref|ZP_18344126.1| hypothetical protein I1A_000190 [Pseudomonas fluorescens R124]
gi|404301925|gb|EJZ55887.1| hypothetical protein I1A_000190 [Pseudomonas fluorescens R124]
Length = 531
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 157 DVSCDDPTDISQDGSRLWAI---DKP-NIAQPPPGWQRLLRIRGEGSTKFADVYYEAPSG 212
DV D D+S+ G+R+W I D+P + A P GWQR + G+ FA +Y APS
Sbjct: 469 DVYLDQLGDLSKVGARVWLIGTLDEPTDFAALPEGWQRQSDVHAGGA--FARLYVMAPSA 526
Query: 213 KK 214
K
Sbjct: 527 DK 528
>gi|333360981|pdb|2KY8|A Chain A, Solution Structure And Dynamic Analysis Of Chicken Mbd2
Methyl Binding Domain Bound To A Target Methylated Dna
Sequence
Length = 72
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ IR G S +DVYY +PSGKK RS ++ +Y V +S F F
Sbjct: 14 PPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGN-------AVDLSCFDF 66
Query: 244 QIPKPL 249
+ K +
Sbjct: 67 RTGKMM 72
>gi|327283518|ref|XP_003226488.1| PREDICTED: bromodomain adjacent to zinc finger domain protein
2B-like [Anolis carolinensis]
Length = 2184
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 21/39 (53%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y P GKKLR E+ KY
Sbjct: 761 GWQRETRIRNFGGRLQGEVAYYTPCGKKLRQYPEVVKYL 799
>gi|328782619|ref|XP_396062.3| PREDICTED: hypothetical protein LOC412607 [Apis mellifera]
Length = 1173
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 67/164 (40%), Gaps = 29/164 (17%)
Query: 170 GSRLWAIDKPNIAQPPP---GWQRLLRIRGEGST---KFADVYYEAPSGKKLRSMVEIQK 223
G + A+D N A P GW+R L R + + AD+YY P GKK+RS E+ +
Sbjct: 211 GKQKIAVDMSNPAFKEPFKYGWKRELVFRASTDSSLKRMADIYYYTPKGKKVRSFREVAE 270
Query: 224 YFLEHPEYARAGVKMSQFSFQIPKPLQENYVRKRVPKAHTSHDTPKALEPRAVSPLSWVS 283
FL E + F+F +P+ + K + + K + V+P
Sbjct: 271 -FLNTKELT-----IDNFTF-FKEPIGLDDPEKEIIR------DAKRIRGSGVTP----- 312
Query: 284 PDNFTDLQLGRPALPAPPVEAPISDPNPRPAKQARRAPKQMYSG 327
P + G P A I +P P P K ++PK M G
Sbjct: 313 PRRGVGYKKGTPGR-----RAIIEEPAPVPTKTPAKSPKSMSVG 351
>gi|119593164|gb|EAW72758.1| methyl CpG binding protein 2 (Rett syndrome), isoform CRA_b [Homo
sapiens]
Length = 154
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAG 235
P GW R L+ R G S DVY P GK RS VE+ YF + E A AG
Sbjct: 101 PEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELIAYFEKLQELAEAG 152
>gi|417406231|gb|JAA49780.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 1249
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y +P GKKLR E+ KY
Sbjct: 655 GWQRETRIRNFGGRLQGEVAYYSPCGKKLRQYPEVIKYL 693
>gi|417406075|gb|JAA49714.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 1186
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 22/39 (56%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
GWQR RIR G +V Y +P GKKLR E+ KY
Sbjct: 592 GWQRETRIRNFGGRLQGEVAYYSPCGKKLRQYPEVIKYL 630
>gi|348502593|ref|XP_003438852.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2A-like
[Oreochromis niloticus]
Length = 2360
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQIP 246
GW+R +R++ + + +Y P G++++ EI KY +H + V FSF
Sbjct: 931 GWKREIRVKKMENRMKGETWYYTPCGRRMKQFPEIVKYLKKHTDSV---VTREHFSFSPR 987
Query: 247 KPLQENYVRKRVPKA 261
P+ + Y + P+
Sbjct: 988 MPVGDFYEERETPEG 1002
>gi|15238389|ref|NP_200746.1| methyl-CPG-binding domain 6 protein [Arabidopsis thaliana]
gi|75180469|sp|Q9LTJ1.1|MBD6_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 6;
Short=AtMBD6; Short=MBD06; AltName:
Full=Methyl-CpG-binding protein MBD6
gi|8885544|dbj|BAA97474.1| unnamed protein product [Arabidopsis thaliana]
gi|28416643|gb|AAO42852.1| At5g59380 [Arabidopsis thaliana]
gi|110743343|dbj|BAE99559.1| hypothetical protein [Arabidopsis thaliana]
gi|332009795|gb|AED97178.1| methyl-CPG-binding domain 6 protein [Arabidopsis thaliana]
Length = 225
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 185 PPGWQRLLRIRGEGSTKFA--DVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFS 242
PPGW+ +IR G+T + YYE +G+K RS E+ Y+LEH R G K ++ +
Sbjct: 82 PPGWRVEDKIRTSGATAGSVDKYYYEPNTGRKFRSRTEVL-YYLEHGTSKR-GTKKAENT 139
Query: 243 FQIPKPLQ 250
+ P +
Sbjct: 140 YFNPDHFE 147
>gi|126323490|ref|XP_001363695.1| PREDICTED: methyl-CpG-binding domain protein 3-like [Monodelphis
domestica]
Length = 289
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
P GW+R R G S +DVYY +PSGKK RS ++ +Y + + +S F F
Sbjct: 12 PQGWKREEVTRKSGLSAGKSDVYYYSPSGKKFRSKPQLARYL-------GSSMDLSTFDF 64
Query: 244 QIPKPLQENYVRKR 257
+ K L + R
Sbjct: 65 RTGKMLMSKMNKNR 78
>gi|355701339|gb|AES01651.1| methyl-CpG binding domain protein 1 [Mustela putorius furo]
Length = 341
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 186 PGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQ 244
PGW+R R G+T +D YY++P+G ++RS VE+ +E Y +S F F+
Sbjct: 45 PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELT---VELTRYLGPACDLSLFDFK 101
>gi|240976669|ref|XP_002402466.1| hypothetical protein IscW_ISCW000867 [Ixodes scapularis]
gi|215491187|gb|EEC00828.1| hypothetical protein IscW_ISCW000867 [Ixodes scapularis]
Length = 928
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 187 GWQRLLRIRGEGSTKFA-DVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQI 245
G++R L R + K A DVYY +G K+RS+ ++ Y +HPE A S I
Sbjct: 16 GFKRELVHRATSNQKVAADVYYYDSAGLKMRSIPDVVTYLGKHPEINLAAANFSFRRVTI 75
Query: 246 PKPLQENYVRKRVPKAHTSHDTP 268
KP E VR+ T+ TP
Sbjct: 76 HKPPHE-VVRQAKAGVRTAPVTP 97
>gi|321478353|gb|EFX89310.1| hypothetical protein DAPPUDRAFT_310291 [Daphnia pulex]
Length = 496
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 187 GWQRLLRIRGEGSTK-FADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF-- 243
GW+R + R +TK DVYY +P GKKLRS EI + E + + + F+F
Sbjct: 171 GWKREIVYRTNPNTKILCDVYYHSPEGKKLRSGPEISNHLNE----ISSRLTLEHFTFCK 226
Query: 244 -QIPKPLQENYVRKRVPKAH 262
I QE VRK PK++
Sbjct: 227 DLIGVGTQE-IVRKANPKSY 245
>gi|345320312|ref|XP_003430271.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein
1-like [Ornithorhynchus anatinus]
Length = 595
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYA-- 232
+D P + PGW+R R G+T D YY++P+G++ RS +E+ ++ + +
Sbjct: 6 MDCPALG---PGWKRRESFRKSGATCGRTDTYYQSPTGERFRSKIELTRFLGPDQDLSLF 62
Query: 233 --RAGVKMSQFSFQIPKPLQE---NYVRKRVPKA 261
+ GV +S P P Q+ +KR+PKA
Sbjct: 63 DFKNGVVLSPDVKAQPSPAQDPPSRKGKKRLPKA 96
>gi|395546804|ref|XP_003775127.1| PREDICTED: uncharacterized protein LOC100923299 [Sarcophilus
harrisii]
Length = 488
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G+++RS VE++++ + +R
Sbjct: 6 LDCPVLG---PGWKRRESFRKSGATCGRSDTYYQSPTGERIRSKVELRRFLGPDCDLSRF 62
Query: 235 GVKMSQFSF 243
K +
Sbjct: 63 DFKRGVLQY 71
>gi|47086513|ref|NP_997933.1| methyl-CpG-binding domain protein 2 [Danio rerio]
gi|29692019|gb|AAO91661.1| methyl-CpG binding protein 2 [Danio rerio]
gi|62204526|gb|AAH93117.1| Mbd2 protein [Danio rerio]
gi|157422758|gb|AAI53556.1| Methyl-CpG binding domain protein 2 [Danio rerio]
gi|182888962|gb|AAI64452.1| Mbd2 protein [Danio rerio]
Length = 256
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYF 225
PPGW++ IR G S +DVYY +P GKK RS ++ +Y
Sbjct: 12 PPGWKKEEVIRKSGLSAGKSDVYYYSPKGKKFRSKPQLSRYL 53
>gi|339773549|gb|AEK05181.1| methyl-binding protein [Schistocerca gregaria]
Length = 182
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 157 DVSCDDPTDISQDGSRLWAIDKPN--IAQPPPGWQRLLRIRGEG-STKFADVYYEAPSGK 213
DV+ D+ D +R A++K + P GWQR IR G S DVYY +P+GK
Sbjct: 3 DVTRSSMQDVIGD-TRTMALEKRKYECSALPKGWQREEVIRKSGLSAGKVDVYYYSPNGK 61
Query: 214 KLRSMVEIQKYF 225
K RS ++ +Y
Sbjct: 62 KFRSKPQLARYL 73
>gi|115725067|ref|XP_783908.2| PREDICTED: uncharacterized protein LOC578658 [Strongylocentrotus
purpuratus]
Length = 550
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 185 PPGWQRLL--RIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFS 242
P GW R + R+ G + KF DVY +P GK+LRSM E+ +H E + + F
Sbjct: 138 PTGWTRKITERMSGASAGKF-DVYLTSPEGKRLRSMKEVA----DHLEKTNSTYTSADFI 192
Query: 243 FQIPKPLQ 250
F+ PK L+
Sbjct: 193 FK-PKNLK 199
>gi|47229311|emb|CAG04063.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1464
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQIP 246
GW+R +R++ + A+ +Y P G++++ EI KY +H + + V FSF
Sbjct: 24 GWKREIRVKKLENRMKAETWYYTPCGRRMKQFPEIIKYLKKHTD---SLVSREHFSFSPR 80
Query: 247 KPLQENYVRKRVPKA 261
P+ + Y + P+
Sbjct: 81 MPVGDFYEERESPEG 95
>gi|260829803|ref|XP_002609851.1| hypothetical protein BRAFLDRAFT_126023 [Branchiostoma floridae]
gi|229295213|gb|EEN65861.1| hypothetical protein BRAFLDRAFT_126023 [Branchiostoma floridae]
Length = 298
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Query: 185 PPGWQRLLRIRGEG-STKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
P GW+R R G S +DVYY +PSGKK RS ++ +Y + +S F F
Sbjct: 12 PKGWKREEVTRKSGLSAGKSDVYYYSPSGKKFRSKPQLARYLGDT-------FDLSCFDF 64
Query: 244 QIPKPLQENYVRKRVPKAHTSHDTPKALEPRAVSPL 279
+ K L V K A + D+ K + V P+
Sbjct: 65 RTGKMLSSK-VNKNKKVATRALDSNKKYDASLVLPI 99
>gi|11514253|pdb|1D9N|A Chain A, Solution Structure Of The Methyl-Cpg-Binding Domain Of The
Methylation-Dependent Transcriptional Repressor Mbd1PCM1
gi|14488681|pdb|1IG4|A Chain A, Solution Structure Of The Methyl-Cpg-Binding Domain Of
Human Mbd1 In Complex With Methylated Dna
Length = 75
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 176 IDKPNIAQPPPGWQRLLRIRGEGST-KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
+D P + PGW+R R G+T +D YY++P+G ++RS VE+ +Y +
Sbjct: 6 LDCPALG---PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLF 62
Query: 235 GVKMSQFSFQIPK 247
K + PK
Sbjct: 63 DFKQGILCYPAPK 75
>gi|432866392|ref|XP_004070828.1| PREDICTED: methyl-CpG-binding domain protein 4-like [Oryzias
latipes]
Length = 440
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 177 DKPNIAQ-PPPGWQRLLRIRGEGSTKFA-DVYYEAPSGKKLRSMVEIQKYFLEHPEYARA 234
DKP + PPGW ++++ R G T DVY +PSG RS +Q + + E
Sbjct: 6 DKPCCSSLMPPGWNKVVKQRKTGKTAGKLDVYITSPSGLTFRSKASLQAFLVNSEE---E 62
Query: 235 GVKMSQFSFQIPK 247
+ +S F F K
Sbjct: 63 NLNLSLFEFTSAK 75
>gi|339232878|ref|XP_003381556.1| putative methyl-CpG binding domain protein [Trichinella spiralis]
gi|316979627|gb|EFV62390.1| putative methyl-CpG binding domain protein [Trichinella spiralis]
Length = 201
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 187 GWQRLLRIRGEGS-TKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQ 244
GW+R L +R S + ADVYY +PSG K RS E++++ + +P+ + G+ F+F+
Sbjct: 94 GWKRELVLRALPSKSTSADVYYISPSGIKFRSSKEVERFAIMNPQ-SMNGLGPENFTFR 151
>gi|348516624|ref|XP_003445838.1| PREDICTED: bromodomain adjacent to zinc finger domain protein
2B-like [Oreochromis niloticus]
Length = 2378
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 170 GSRLWAIDKPNIAQPPP-GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEH 228
G R +D+ + P GW+R RI+ +V Y AP GKKLR ++ KY +
Sbjct: 871 GKRKRVMDEKELMIPLELGWRRETRIKSVAGRPQGEVAYYAPCGKKLRQYPDVMKYLSRN 930
Query: 229 PEYARAGVKMSQFSF 243
+G+ FSF
Sbjct: 931 ---GISGITRDNFSF 942
>gi|355750561|gb|EHH54888.1| hypothetical protein EGM_03990 [Macaca fascicularis]
Length = 2371
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQIP 246
GWQR RIR G +V Y AP GKKLR E+ K +AR + + +Q
Sbjct: 966 GWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKL------WARMDTENMKDQYQKS 1019
Query: 247 KPLQENYV 254
K L E YV
Sbjct: 1020 KSL-EIYV 1026
>gi|412988901|emb|CCO15492.1| predicted protein [Bathycoccus prasinos]
Length = 872
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 186 PGWQRLLRIRGEGSTKFA-DVYYEAPSGKKLRSMVEIQKYF 225
PGW+ + R G+TK D YY +P G+KLRS E+ ++
Sbjct: 25 PGWRVAIETRKSGATKGGTDKYYFSPDGRKLRSKTEVMRFL 65
>gi|303281052|ref|XP_003059818.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458473|gb|EEH55770.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 660
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 185 PPGWQRLLRIRGEGSTKFA------DVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKM 238
P GW+R + R G+ K D +Y +P GK L+S E+ KY +P A GV +
Sbjct: 392 PEGWKRTVVKRPAGTLKKNTPDADRDTFYRSPDGKTLKSKHEVTKYLGSNPS-ASHGVTV 450
Query: 239 SQFSFQ 244
F F+
Sbjct: 451 KDFFFE 456
>gi|410899959|ref|XP_003963464.1| PREDICTED: methyl-CpG-binding domain protein 4-like [Takifugu
rubripes]
Length = 257
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 185 PPGWQRLLRIRGEGSTKF-ADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW R +R R G T DVY +P G K RS +Q + L++ R + ++ F+F
Sbjct: 25 PPGWIREVRQRKTGKTAGKLDVYIISPQGLKFRSKTSLQAFLLKN---GREDLNINLFNF 81
Query: 244 QIPK 247
K
Sbjct: 82 SASK 85
>gi|348519885|ref|XP_003447460.1| PREDICTED: bromodomain adjacent to zinc finger domain protein
2B-like [Oreochromis niloticus]
Length = 2035
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEH 228
GWQR RIR +V Y AP GKKLR ++ KY + +
Sbjct: 608 GWQRETRIRTVAGRLQGEVAYFAPCGKKLRQYPDVVKYLIRN 649
>gi|354488133|ref|XP_003506225.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2A
[Cricetulus griseus]
Length = 1872
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQIP 246
GW+R +RI+ G + +Y P GK+++ E+ KY + ++ V+ FSF
Sbjct: 526 GWRREVRIKKGGHRWQGETWYYGPCGKRMKQFPEVIKYLSRNVVHS---VRREHFSFSPR 582
Query: 247 KPLQENYVRKRVPKA 261
P+ + + + P+
Sbjct: 583 MPVGDFFEERDTPEG 597
>gi|344256387|gb|EGW12491.1| Bromodomain adjacent to zinc finger domain protein 2A [Cricetulus
griseus]
Length = 1874
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 187 GWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQIP 246
GW+R +RI+ G + +Y P GK+++ E+ KY + ++ V+ FSF
Sbjct: 528 GWRREVRIKKGGHRWQGETWYYGPCGKRMKQFPEVIKYLSRNVVHS---VRREHFSFSPR 584
Query: 247 KPLQENYVRKRVPKA 261
P+ + + + P+
Sbjct: 585 MPVGDFFEERDTPEG 599
>gi|350408186|ref|XP_003488331.1| PREDICTED: hypothetical protein LOC100740617 [Bombus impatiens]
Length = 1180
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 21/144 (14%)
Query: 187 GWQRLLRIRGEGST---KFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
GW+R L R + + AD+YY P GKK+RS E+ + FL E + F+F
Sbjct: 232 GWRRELVFRASNDSSLKRMADIYYYTPKGKKVRSFREVAE-FLNTKELT-----IDNFTF 285
Query: 244 QIPKPLQENYVRKRVPKAHTSHDTPKALEPRAVSPLSWVSPDNFTDLQLGRPALPAPPVE 303
+ +P+ + P+ D + P +S P + G P VE
Sbjct: 286 -LKEPIGPDD-----PEKEIIRDAKRMRGP----GISVTPPRKSIGHKRGTPGKRV--VE 333
Query: 304 APISDPNPRPAKQARRAPKQMYSG 327
P S P P K A ++PK +G
Sbjct: 334 EPASVPPPVATKAATKSPKATSTG 357
>gi|390334106|ref|XP_783177.3| PREDICTED: bromodomain adjacent to zinc finger domain protein
2B-like isoform 4 [Strongylocentrotus purpuratus]
Length = 2272
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 15/89 (16%)
Query: 172 RLWAIDKPNIAQP-PPGWQR--LLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF--- 225
RL D+ + P GW+R ++R G G DV Y AP GKKLR+ E+ +Y
Sbjct: 579 RLRVTDERAVRWPLANGWRRQTIIRQLGPGDRIKGDVIYYAPCGKKLRTYPEVVRYIERR 638
Query: 226 ------LEHPEYARAGVKMSQFSFQIPKP 248
EH Y+ KM F PKP
Sbjct: 639 GITSVAREHFSYS---AKMRIGEFLNPKP 664
>gi|357145156|ref|XP_003573545.1| PREDICTED: uncharacterized protein LOC100834821 [Brachypodium
distachyon]
Length = 1048
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 154 WRPDVSCDDPTDISQDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYEAP-SG 212
W+ D+S + + SQ + D+ Q P GW+R R R GST D YY P +G
Sbjct: 293 WKEDISRKNKS--SQKSDLVKNKDEHIKRQLPDGWRREDRPRRNGSTNKTDPYYIDPVNG 350
Query: 213 KKLRSMVEIQKYF 225
+ RSM ++ +Y
Sbjct: 351 YEFRSMKDVHRYI 363
>gi|390334108|ref|XP_003723850.1| PREDICTED: bromodomain adjacent to zinc finger domain protein
2B-like isoform 2 [Strongylocentrotus purpuratus]
Length = 2303
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 15/89 (16%)
Query: 172 RLWAIDKPNIAQP-PPGWQR--LLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF--- 225
RL D+ + P GW+R ++R G G DV Y AP GKKLR+ E+ +Y
Sbjct: 579 RLRVTDERAVRWPLANGWRRQTIIRQLGPGDRIKGDVIYYAPCGKKLRTYPEVVRYIERR 638
Query: 226 ------LEHPEYARAGVKMSQFSFQIPKP 248
EH Y+ KM F PKP
Sbjct: 639 GITSVAREHFSYS---AKMRIGEFLNPKP 664
>gi|390334110|ref|XP_003723851.1| PREDICTED: bromodomain adjacent to zinc finger domain protein
2B-like isoform 3 [Strongylocentrotus purpuratus]
Length = 2266
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 15/89 (16%)
Query: 172 RLWAIDKPNIAQP-PPGWQR--LLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF--- 225
RL D+ + P GW+R ++R G G DV Y AP GKKLR+ E+ +Y
Sbjct: 579 RLRVTDERAVRWPLANGWRRQTIIRQLGPGDRIKGDVIYYAPCGKKLRTYPEVVRYIERR 638
Query: 226 ------LEHPEYARAGVKMSQFSFQIPKP 248
EH Y+ KM F PKP
Sbjct: 639 GITSVAREHFSYS---AKMRIGEFLNPKP 664
>gi|115530686|emb|CAL49326.1| bromodomain adjacent to zinc finger domain, 2A [Xenopus (Silurana)
tropicalis]
Length = 603
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 187 GWQRLLRIRGEGSTKF-ADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSFQI 245
GW+R +RIR +GS ++ + +Y AP GK+++ E+ KY ++ A V+ FSF
Sbjct: 432 GWKREVRIR-KGSHRWQGETWYYAPCGKRMKQFPEVIKYLSKN---AGPYVRREHFSFSP 487
Query: 246 PKPLQENY 253
P+ + Y
Sbjct: 488 RMPVGDFY 495
>gi|390334104|ref|XP_003723849.1| PREDICTED: bromodomain adjacent to zinc finger domain protein
2B-like isoform 1 [Strongylocentrotus purpuratus]
Length = 2186
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 15/89 (16%)
Query: 172 RLWAIDKPNIAQP-PPGWQR--LLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYF--- 225
RL D+ + P GW+R ++R G G DV Y AP GKKLR+ E+ +Y
Sbjct: 579 RLRVTDERAVRWPLANGWRRQTIIRQLGPGDRIKGDVIYYAPCGKKLRTYPEVVRYIERR 638
Query: 226 ------LEHPEYARAGVKMSQFSFQIPKP 248
EH Y+ KM F PKP
Sbjct: 639 GITSVAREHFSYS---AKMRIGEFLNPKP 664
>gi|147907162|ref|NP_001081854.1| methyl CpG binding protein 2 (Rett syndrome) [Xenopus laevis]
gi|4105999|gb|AAD02651.1| methyl-CpG-binding protein 2 [Xenopus laevis]
gi|4139226|gb|AAD03736.1| methyl-CpG-binding protein MeCP2 [Xenopus laevis]
Length = 467
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 185 PPGWQRLLRIR--GEGSTKFADVYYEAPSGKKLRSMVEIQKYF 225
P GW R L+ R G + KF DVY P+GK RS VE+ YF
Sbjct: 102 PEGWTRKLKQRKSGRSAGKF-DVYLINPNGKAFRSKVELIAYF 143
>gi|363814368|ref|NP_001242823.1| uncharacterized protein LOC100801517 [Glycine max]
gi|255647122|gb|ACU24029.1| unknown [Glycine max]
Length = 292
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 185 PPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ + G+ K ++ + AP+G+++ + +++KY HP G +S+F +
Sbjct: 23 PPGWKKQFIPKKAGTPKKNEIVFTAPTGEEINNRKQLEKYLKAHP----GGPAVSEFDW 77
>gi|356516967|ref|XP_003527162.1| PREDICTED: uncharacterized protein LOC100796239 [Glycine max]
Length = 305
Score = 37.4 bits (85), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 185 PPGWQRLLRIRGEGSTKFADVYYEAPSGKKLRSMVEIQKYFLEHPEYARAGVKMSQFSF 243
PPGW++ + G+ K ++ + AP+G+++ + +++KY HP G +S+F +
Sbjct: 23 PPGWKKQFIPKKAGTPKKNEIVFTAPTGEEINNRKQLEKYLKAHP----GGPAVSEFDW 77
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.130 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,052,212,622
Number of Sequences: 23463169
Number of extensions: 282445033
Number of successful extensions: 784842
Number of sequences better than 100.0: 405
Number of HSP's better than 100.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 274
Number of HSP's that attempted gapping in prelim test: 784424
Number of HSP's gapped (non-prelim): 513
length of query: 340
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 197
effective length of database: 9,003,962,200
effective search space: 1773780553400
effective search space used: 1773780553400
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 77 (34.3 bits)