BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019511
(340 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54P70|Y4757_DICDI OTU domain-containing protein DDB_G0284757 OS=Dictyostelium
discoideum GN=DDB_G0284757 PE=4 SV=2
Length = 766
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 103/190 (54%), Gaps = 13/190 (6%)
Query: 145 ELTDEYALDGEVGKRLNQMVPV--PHVPRINGEIPSIDEATLDHQRLLERLQVYDLVEHK 202
E+ L+G V K +N + +V +P E + QRL ERL++Y L K
Sbjct: 575 EIKTNLLLEGLVLKNMNHDASLISSNVLLNLHPLPQSKEVQIAQQRLNERLELYMLKNSK 634
Query: 203 -VQGDGNCQFRALSDQIYRTAEHHEFVRQQIVAQLKSNPD--------IYEGYVPMAYGD 253
+ GDGNCQ ALSDQ+Y H + VR+ IV L+ N D I + + D
Sbjct: 635 EIPGDGNCQMHALSDQLYGDLSHSQEVRKTIVDWLRKNKDFQLPNGATICQFVNTNNWDD 694
Query: 254 YLEKMSESGEWGDHVTLQAAADLYGVKIFVITSF--KDTCYIEILPNVERSIRVIYLSFW 311
Y MS++G WGDH+TL AAA+ +G KI +I+S + +IEI+P+ + +V+ LS +
Sbjct: 695 YCNDMSKNGNWGDHLTLLAAAEHFGSKISIISSVESQSNFFIEIIPSKILNDKVLLLSHY 754
Query: 312 AEVHYNSIYP 321
AE HY S+ P
Sbjct: 755 AEFHYGSLCP 764
>sp|Q96G74|OTUD5_HUMAN OTU domain-containing protein 5 OS=Homo sapiens GN=OTUD5 PE=1 SV=1
Length = 571
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 174 GEIPSIDEATLDHQRLLERLQVYD---LVEHKVQGDGNCQFRALSDQIYRTAEHHEFVRQ 230
I ++D AT++ Q + D + +++ DG C FRA++DQ+Y + HE VR+
Sbjct: 186 ARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRK 245
Query: 231 QIVAQLKSNPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVITSFKDT 290
+ L N D + YV + Y+ + ++ G+H+ +QA A++Y + V T
Sbjct: 246 HCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTGT 305
Query: 291 CYIE-------ILPNVERSIRVIYLSFWAEVHYNSI 319
+E I N + IRV S+ +HYNS+
Sbjct: 306 SAVEPINTFHGIHQNEDEPIRV---SYHRNIHYNSV 338
>sp|Q3U2S4|OTUD5_MOUSE OTU domain-containing protein 5 OS=Mus musculus GN=Otud5 PE=1 SV=2
Length = 566
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 174 GEIPSIDEATLDHQRLLERLQVYD---LVEHKVQGDGNCQFRALSDQIYRTAEHHEFVRQ 230
I ++D AT++ Q + D + +++ DG C FRA++DQ+Y + HE VR+
Sbjct: 186 ARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRK 245
Query: 231 QIVAQLKSNPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYG--VKIFVITSFK 288
+ L N D + YV + Y+ + ++ G+H+ +QA A++Y V+++ ++
Sbjct: 246 HCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEP 305
Query: 289 DTCYIEILPNVERSIRVIYLSFWAEVHYNSI 319
+ I N + IRV S+ +HYNS+
Sbjct: 306 INTFHGIHQNEDEPIRV---SYHRNIHYNSV 333
>sp|Q2YDU3|OTUD5_RAT OTU domain-containing protein 5 OS=Rattus norvegicus GN=Otud5 PE=2
SV=2
Length = 566
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 174 GEIPSIDEATLDHQRLLERLQVYD---LVEHKVQGDGNCQFRALSDQIYRTAEHHEFVRQ 230
I ++D AT++ Q + D + +++ DG C FRA++DQ+Y + HE VR+
Sbjct: 186 ARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRK 245
Query: 231 QIVAQLKSNPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYG--VKIFVITSFK 288
+ L N D + YV + Y+ + ++ G+H+ +QA A++Y V+++ ++
Sbjct: 246 HCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEP 305
Query: 289 DTCYIEILPNVERSIRVIYLSFWAEVHYNSI 319
+ I N + IRV S+ +HYNS+
Sbjct: 306 INTFHGIHQNEDEPIRV---SYHRNIHYNSV 333
>sp|Q08BW0|OTU5A_DANRE OTU domain-containing protein 5-A OS=Danio rerio GN=otud5a PE=2
SV=1
Length = 560
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 77/149 (51%), Gaps = 12/149 (8%)
Query: 178 SIDEATLDHQ-----RLLERLQVYDLVEHKVQGDGNCQFRALSDQIYRTAEHHEFVRQQI 232
S D AT++ Q + L+ + + V K++ DG C FRA++DQ+Y + HE VR+
Sbjct: 188 SEDPATVEQQEHWFEKALQEKKGF--VIKKMKEDGACLFRAVADQVYGDQDMHEVVRKHC 245
Query: 233 VAQLKSNPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVITSFKD--T 290
+ L N D + YV + Y+ + ++ G+H+ +QA A++Y + V S +
Sbjct: 246 MDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQSGTEPIN 305
Query: 291 CYIEILPNVERSIRVIYLSFWAEVHYNSI 319
+ I N + IRV S+ +HYNS+
Sbjct: 306 TFHGIHQNNDEPIRV---SYHRNIHYNSV 331
>sp|Q7ZX21|OTU5A_XENLA OTU domain-containing protein 5-A OS=Xenopus laevis GN=otud5-a PE=2
SV=1
Length = 513
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 179 IDEATLDHQRLLERLQVYD---LVEHKVQGDGNCQFRALSDQIYRTAEHHEFVRQQIVAQ 235
+D T + Q L + D + +++ DG C FRA++DQ+Y + HE VR+ +
Sbjct: 144 LDPDTAEQQELCFEKTLSDKKGFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDY 203
Query: 236 LKSNPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYG--VKIFVITSFKDTCYI 293
L N D + YV + Y+ + ++ G+H+ +QA A++Y V+++ + +
Sbjct: 204 LMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYGTEPINTFH 263
Query: 294 EILPNVERSIRVIYLSFWAEVHYNSI 319
I N + IRV S+ +HYNS+
Sbjct: 264 GIQKNEDEPIRV---SYHRNIHYNSV 286
>sp|Q6GL44|OTUD5_XENTR OTU domain-containing protein 5 OS=Xenopus tropicalis GN=otud5 PE=2
SV=1
Length = 518
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 5/120 (4%)
Query: 202 KVQGDGNCQFRALSDQIYRTAEHHEFVRQQIVAQLKSNPDIYEGYVPMAYGDYLEKMSES 261
+++ DG C FRA++DQ+Y + HE VR+ + L N D + YV + Y+ + ++
Sbjct: 175 QMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKN 234
Query: 262 GEWGDHVTLQAAADLYG--VKIFVITSFKDTCYIEILPNVERSIRVIYLSFWAEVHYNSI 319
G+H+ +QA A++Y V+++ + + I N + IRV S+ +HYNS+
Sbjct: 235 NCHGNHIEMQAMAEMYNRPVEVYQYGTEPINTFHGIQQNEDEPIRV---SYHRNIHYNSV 291
>sp|Q640H3|OTU5B_XENLA OTU domain-containing protein 5-B OS=Xenopus laevis GN=otud5-b PE=2
SV=1
Length = 518
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 5/120 (4%)
Query: 202 KVQGDGNCQFRALSDQIYRTAEHHEFVRQQIVAQLKSNPDIYEGYVPMAYGDYLEKMSES 261
+++ DG C FRA++DQ+Y + HE VR+ + L N D + YV + Y+ + ++
Sbjct: 175 QMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKN 234
Query: 262 GEWGDHVTLQAAADLYG--VKIFVITSFKDTCYIEILPNVERSIRVIYLSFWAEVHYNSI 319
G+H+ +QA A++Y V+++ + + I N + IRV S+ +HYNS+
Sbjct: 235 NCHGNHIEMQAMAEMYNRPVEVYQYGTEPINTFHGIQQNEDEPIRV---SYHRNIHYNSV 291
>sp|Q9D8C3|ALG13_MOUSE UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Mus
musculus GN=Alg13 PE=2 SV=2
Length = 1166
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 178 SIDEATLDHQRLLERLQVYDLVEHKVQGDGNCQFRALSDQIYRTAEHHEFVRQQIVAQLK 237
S++EA++D E L L V D +C FRA+S+Q++ + HH +R+ V+ +K
Sbjct: 210 SLNEASMD-----EYLGSLGLFRKVVAKDASCLFRAISEQLFHSQIHHLQIRRACVSYMK 264
Query: 238 SNPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVITSFKDTCYIEILP 297
N +E YV ++ YLE++ + E + L+A + +Y + F+I + ++
Sbjct: 265 ENQQAFESYVEGSFEKYLERLGDPKESAGQLELKALSLIYN-RDFIIYRYPGKPPTQVTD 323
Query: 298 NVERSIRVIYLSFWAEVHYNSIY 320
N I L + HY+S+Y
Sbjct: 324 NGFED--KIILCYSNNGHYDSVY 344
>sp|P22856|VL96_IRV1 Putative ubiquitin thioesterase L96 OS=Tipula iridescent virus
GN=L96 PE=3 SV=1
Length = 867
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 22/166 (13%)
Query: 189 LLERLQVYDLVEHKVQGDGNCQFRALSDQIYRTAE---HHEFVRQQIVAQLKSNPDIYEG 245
+L R + Y ++ V+GDGNC FRA+ + HE +R Q+V L S+ + E
Sbjct: 599 ILARRRGYKVIP--VKGDGNCLFRAVGKSLRLNQNIKYSHEDLRAQVVTYLTSHKEFLEP 656
Query: 246 YV----------PMAYGD----YLEKMSESGEWGDHVTLQAAADLYGVKIFVITSFKDTC 291
Y+ P Y Y++ +S+ G WGD + L+ +++ VK ++ +T
Sbjct: 657 YLEYVTESGDTTPQEYAKNVERYIKNISKPGTWGDFICLRVLSEILKVKFNLL--ILNTR 714
Query: 292 YIEILPNVERSIRVIYLSFWAEVHYNSIYPAGGKYPIFVFMDHTHS 337
+++ N + +I L F + HY ++ P + PI V + T +
Sbjct: 715 NFQVISNNDTFKPLIPLGFIDDYHYTALTPLYAE-PIAVLENETPT 759
>sp|Q9NP73|ALG13_HUMAN UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Homo
sapiens GN=ALG13 PE=1 SV=2
Length = 1137
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 178 SIDEATLDHQRLLERLQVYDLVEHKVQGDGNCQFRALSDQIYRTAEHHEFVRQQIVAQLK 237
S++EA++D E L L D +C FRA+S+Q++ + HH +R+ V+ ++
Sbjct: 216 SLNEASMD-----EYLGSLGLFRKLTAKDASCLFRAISEQLFCSQVHHLEIRKACVSYMR 270
Query: 238 SNPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVITSFKDTCYIEILP 297
N +E YV ++ YLE++ + E + ++A + +Y + F++ F +
Sbjct: 271 ENQQTFESYVEGSFEKYLERLGDPKESAGQLEIRALSLIYN-RDFILYRFPGKPPTYVTD 329
Query: 298 NVERSIRVIYLSFWAEVHYNSIY 320
N I L + + HY+S+Y
Sbjct: 330 NGYED--KILLCYSSSGHYDSVY 350
>sp|Q196X6|VF232_IIV3 Putative ubiquitin thioesterase 232R OS=Invertebrate iridescent
virus 3 GN=IIV3-084L PE=3 SV=1
Length = 844
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 27/172 (15%)
Query: 167 PHVPRINGEIPSIDEATLDHQRLLERL-QVYDLVEHKVQGDGNCQFRALSDQIYRTAEHH 225
P +P+ G P D LE+L Q +V GDGNC FR++ I R
Sbjct: 567 PELPKYKGRTPYTD---------LEQLAQSKGYTVKQVSGDGNCLFRSVCKSI-RALRGE 616
Query: 226 EF----VRQQIVAQLKSNPD---IYEGYVPMAYGD-------YLEKMSESGEWGDHVTLQ 271
+F +RQ +V L+ NP+ +Y YV + YL +MS+ G WGD + L+
Sbjct: 617 KFTHRQLRQMVVDYLRENPEFLQVYLEYVARQRDNSLPSTEQYLSEMSKCGTWGDLICLK 676
Query: 272 AAADLYGVKIFVITSFKDTCYIEILPNVERSIRVIYLSFWAEVHYNSIYPAG 323
+++ V+ ++ +T +++ + + VI L + HY S+ P G
Sbjct: 677 TLSEILKVQFNLL--ILNTKQFQMVSSQDDYPDVIPLGYIDNYHYTSLVPIG 726
>sp|B2RRE7|OTUD4_MOUSE OTU domain-containing protein 4 OS=Mus musculus GN=Otud4 PE=1 SV=1
Length = 1107
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 22/155 (14%)
Query: 174 GEIPSIDEATLDHQRLLERLQVYDLVEHKVQGDGNCQFRALSDQIYRTAEHHEFVRQQIV 233
G P DE +D L +L +Y + V DG+C FRA+++Q+ + H VR +
Sbjct: 15 GVGPLEDETPMDA--YLRKLGLYRKL---VAKDGSCLFRAVAEQVLHSQSRHVEVRMACI 69
Query: 234 AQLKSNPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVITSFKDTCYI 293
L+ N + +E ++ ++ +YL+++ EW V + A + +Y K FVI Y
Sbjct: 70 RYLRENREKFEAFIEGSFEEYLKRLENPQEWVGQVEISALSLMY-RKDFVI-------YQ 121
Query: 294 EILPNVERS-------IRVIYLSFWAEVHYNSIYP 321
E PNV S + L F HY+ +YP
Sbjct: 122 E--PNVSPSHVTENNFPEKVLLCFSNGNHYDIVYP 154
>sp|Q01804|OTUD4_HUMAN OTU domain-containing protein 4 OS=Homo sapiens GN=OTUD4 PE=1 SV=3
Length = 1113
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 8/148 (5%)
Query: 174 GEIPSIDEATLDHQRLLERLQVYDLVEHKVQGDGNCQFRALSDQIYRTAEHHEFVRQQIV 233
G P D +D L +L +Y + V DG+C FRA+++Q+ + H VR +
Sbjct: 15 GAGPREDATPMDA--YLRKLGLYRKL---VAKDGSCLFRAVAEQVLHSQSRHVEVRMACI 69
Query: 234 AQLKSNPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVITSFKDTCYI 293
L+ N + +E ++ ++ +YL+++ EW V + A + +Y K F+I +
Sbjct: 70 HYLRENREKFEAFIEGSFEEYLKRLENPQEWVGQVEISALSLMY-RKDFIIYREPNVSPS 128
Query: 294 EILPNVERSIRVIYLSFWAEVHYNSIYP 321
++ N + L F HY+ +YP
Sbjct: 129 QVTEN--NFPEKVLLCFSNGNHYDIVYP 154
>sp|Q7RTX8|HIN1L_HUMAN Putative HIN1-like protein OS=Homo sapiens GN=HIN1L PE=5 SV=1
Length = 443
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 22/165 (13%)
Query: 164 VPVPHVPRINGEIPSIDEATLDHQRLLERLQVYDLVEHKVQGDGNCQFRALSDQIYRTAE 223
V VP G P D +D L +L +Y + V DG+C FRA+++Q+ +
Sbjct: 5 VGVPDGEDQGGAGPREDATPMDA--YLRKLGLYRKL---VAKDGSCLFRAVAEQVLHSQS 59
Query: 224 HHEFVRQQIVAQLKSNPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFV 283
H VR + L+ N + +E + ++ YL+++ EW + + A + +Y K F+
Sbjct: 60 RHVEVRMACIHCLRENREKFEAIIGGSFEGYLKRLENPQEWVGQMEISALSLMYR-KDFI 118
Query: 284 ITSFKDTCYIEILPNVERS-------IRVIYLSFWAEVHYNSIYP 321
+ PNV S + L F HY+ +YP
Sbjct: 119 TN---------LEPNVSPSQVTENNFPEKVLLCFSNGNHYDIVYP 154
>sp|Q9CUB6|OTUD1_MOUSE OTU domain-containing protein 1 OS=Mus musculus GN=Otud1 PE=2 SV=2
Length = 454
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 206 DGNCQFRALSDQIYRTAEHHEFVRQQIVAQLKSNPDIYEGYVPMAYGDYLEKMSESGEWG 265
DGNC +RA+S +Y H +R+Q V + + D + + G+++ ++ G W
Sbjct: 290 DGNCLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLIEGDVGEFIIAAAQDGAWA 349
Query: 266 DHVTLQAAADLYGVKIFVIT-----SFKDTCYIEILPNVERSIR-VIYLSFWAEVHYNSI 319
+ L A + V I + T S + I L E S+R I+LS+ + HY+++
Sbjct: 350 GYPELLAMGQMLNVNIHLTTGGRLESPTVSTMIHYL-GPEDSLRPSIWLSWLSNGHYDAV 408
Query: 320 Y 320
+
Sbjct: 409 F 409
>sp|Q5VV17|OTUD1_HUMAN OTU domain-containing protein 1 OS=Homo sapiens GN=OTUD1 PE=2 SV=1
Length = 481
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 206 DGNCQFRALSDQIYRTAEHHEFVRQQIVAQLKSNPDIYEGYVPMAYGDYLEKMSESGEWG 265
DGNC +RA+S +Y H +R+Q V + + D + + G+++ ++ G W
Sbjct: 317 DGNCLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLIEGDVGEFIIAAAQDGAWA 376
Query: 266 DHVTLQAAADLYGVKIFVIT-----SFKDTCYIEILPNVERSIR-VIYLSFWAEVHYNSI 319
+ L A + V I + T S + I L E S+R I+LS+ + HY+++
Sbjct: 377 GYPELLAMGQMLNVNIHLTTGGRLESPTVSTMIHYL-GPEDSLRPSIWLSWLSNGHYDAV 435
Query: 320 Y 320
+
Sbjct: 436 F 436
>sp|P10383|OTU_DROME Protein ovarian tumor locus OS=Drosophila melanogaster GN=otu PE=2
SV=2
Length = 853
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Query: 193 LQVYDLVEHKVQGDGNCQFRALSDQIYRTAEHHEFVRQQIVAQLKSNPDIYEGYVPMAYG 252
L+ L D + FR +++Q+Y T H +R + V + I+E +P +
Sbjct: 24 LESRGLYRKHTARDASSLFRVIAEQMYDTQMLHYEIRLECVRFMTLKRRIFEKEIPGDFD 83
Query: 253 DYLEKMSESGEWGDHVTLQAAADLYGVKIFVITSFKDTCYIEILPNVERSIRVIYLSFWA 312
Y++ MS+ +G L+A + LY + + + + + RV F
Sbjct: 84 SYMQDMSKPKTYGTMTELRAMSCLYRRNVILYEPYNMGTSVVFNRRYAENFRVF---FNN 140
Query: 313 EVHYNSIY 320
E H++S+Y
Sbjct: 141 ENHFDSVY 148
>sp|Q7L8S5|OTU6A_HUMAN OTU domain-containing protein 6A OS=Homo sapiens GN=OTUD6A PE=2
SV=1
Length = 288
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 19/145 (13%)
Query: 203 VQGDGNCQFRALSDQIYRTAEHHEFVRQQIVAQLK----------SNPDIYEGYVPMAYG 252
+ DG+C +RA+ DQ+ + E +R + + +K SNP+ + + +
Sbjct: 146 IPADGHCMYRAIQDQLVFSVS-VEMLRCRTASYMKKHVDEFLPFFSNPETSDSFGYDDFM 204
Query: 253 DYLEKMSESGEWGDHVTLQAAADLYGVKIFVITSFKDTCYIEILPNVERSIRVIYLSFWA 312
Y + + + WG + L+A + + I VI + T I V++ I ++YL +
Sbjct: 205 IYCDNIVRTTAWGGQLELRALSHVLKTPIEVIQADSPTLIIG-EEYVKKPIILVYLRYAY 263
Query: 313 EV--HYNSIYP-----AGGKYPIFV 330
+ HYNS+ P AGG P +
Sbjct: 264 SLGEHYNSVTPLEAGAAGGVLPRLL 288
>sp|Q5T2D3|OTUD3_HUMAN OTU domain-containing protein 3 OS=Homo sapiens GN=OTUD3 PE=1 SV=1
Length = 398
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 193 LQVYDLVEHKVQGDGNCQFRALSDQIYRTAEHHEFVRQQIVAQLKSNPDIYEGYVP--MA 250
LQ L +V GDGNC FRAL DQ+ + +H RQ+ V + + +E +V +
Sbjct: 60 LQALGLKLREVPGDGNCLFRALGDQLEGHSRNHLKHRQETVDYMIKQREDFEPFVEDDIP 119
Query: 251 YGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVITSFKDTCYIEILPNVERSIRVIYLSF 310
+ ++ +++ G + + + A A + + + VI + +I + S+R +++++
Sbjct: 120 FEKHVASLAKPGTFAGNDAIVAFARNHQLNV-VIHQLNAPLW-QIRGTEKSSVRELHIAY 177
Query: 311 WAEVHYNSI 319
HY+S+
Sbjct: 178 RYGEHYDSV 186
>sp|O13974|OTU1_SCHPO Putative ubiquitin thioesterase otu1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=otu1 PE=1 SV=1
Length = 329
Score = 40.0 bits (92), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 12/90 (13%)
Query: 197 DLVEHKVQGDGNCQFRALSDQI-YRTAEHHEFVRQQIVAQLKSNPDIYE----GYVPMAY 251
D+ + D +C FRALS + + E E V Q++ SNPDIY G + Y
Sbjct: 134 DIALRVMPDDNSCLFRALSKPLGFSPYELREIVANQVL----SNPDIYSTAILGKPSIEY 189
Query: 252 GDYLEKMSESGEWGDHVTLQAAADLYGVKI 281
++ K + WG ++ L + +GV+I
Sbjct: 190 ASWIRKET---SWGGYIELSILSSHFGVEI 216
>sp|Q91FU0|VF232_IIV6 Putative ubiquitin thioesterase 232R OS=Invertebrate iridescent
virus 6 GN=IIV6-232R PE=3 SV=1
Length = 671
Score = 38.9 bits (89), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 72/173 (41%), Gaps = 20/173 (11%)
Query: 180 DEATLDHQRLLERLQVYDLVEHK------VQGDGNCQFRALSDQIYRTAEHHEFVRQQIV 233
D L R+ E Q+ L + V DGNC F + + + T+ +RQ V
Sbjct: 368 DLNNLPENRIAELKQLNVLAKQNGFRMINVPLDGNCMFSVIG-RAFNTSSS--VIRQHTV 424
Query: 234 AQLKSNPDIYEGYVP-------MAYGDYLEKMSESGEWGDHVTLQAA--ADLYGVKIFVI 284
L+ ++ ++P + + DY++++ E WGD+ L AA A + I +
Sbjct: 425 DYLRRCKGSFD-HIPANIDDPTINWNDYIDRLEEDACWGDNTALFAASLALNFQAHILQV 483
Query: 285 TSFKDTCYIEILPNVERSIRVIYLSFWAEVHYNSIYPAGGKYPIFVFMDHTHS 337
+ +I N R++ + + HY ++ P G+ I + THS
Sbjct: 484 AGGDEGSWIRFGVNETNMGRIVNMGYLDNFHYIALEPFSGRLDIL-SIPSTHS 535
>sp|Q7ZV00|OTU6B_DANRE OTU domain-containing protein 6B OS=Danio rerio GN=otud6b PE=2 SV=1
Length = 293
Score = 38.9 bits (89), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 72/152 (47%), Gaps = 23/152 (15%)
Query: 186 HQRLLER-LQVYDLVEHKVQGDGNCQFRALSDQIYRT--AEHHEFVRQQIVAQLKS---- 238
++L+ER LQ+ + + DG+C +RA+ Q+ A + +R Q ++S
Sbjct: 139 REKLVERHLQIKE-----ISSDGHCMYRAVEHQLTERGLALGLKELRDQTAQYMRSHADD 193
Query: 239 ------NPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVITSFKDTCY 292
NP+ + Y + Y ++++ WG + L+A + + + I VI + D+
Sbjct: 194 FMPFLTNPNTGDMYTAEEFEKYCSDVADTAAWGGQLELKALSQVLQLPIEVIQA--DSPC 251
Query: 293 IEILPNVER-SIRVIYL--SFWAEVHYNSIYP 321
I I ++ I +IY+ ++ HYNS+ P
Sbjct: 252 ITIGEEYDKPKITLIYMRHAYGLGEHYNSVEP 283
>sp|Q8K2H2|OTU6B_MOUSE OTU domain-containing protein 6B OS=Mus musculus GN=Otud6b PE=2
SV=1
Length = 294
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 53/116 (45%), Gaps = 14/116 (12%)
Query: 184 LDHQRLLERLQVYDLVEHKVQGDGNCQFRALSDQIY-------------RTAEHHEFVRQ 230
L+ ++L + L +L ++ DG+C + AL DQ+ +TAE+ +
Sbjct: 134 LESEKLAQILAARELEIKQIPSDGHCMYGALEDQLREQDCALTVASLRRQTAEYMQTHSD 193
Query: 231 QIVAQLKSNPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVITS 286
+ L +NP + Y P +G Y + + + WG + L+A + + I ++ +
Sbjct: 194 DFLPFL-TNPSTGDMYTPEEFGKYCDDIVNTAAWGGQLELRALSHILQTPIEILQA 248
>sp|Q6IE21|OTU6A_MOUSE OTU domain-containing protein 6A OS=Mus musculus GN=Otud6a PE=2
SV=1
Length = 290
Score = 36.6 bits (83), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 18/143 (12%)
Query: 193 LQVYDLVEHKVQGDGNCQFRALSDQI----------YRTAEHHEFVRQQIVAQLK--SNP 240
L +L + DG+C +RA+ DQ+ YRTA ++R+ I L + P
Sbjct: 137 LGAKNLEMKTIPADGHCMYRAIQDQLVFSVTIESLRYRTA---YYMRKHIDDFLPFFTEP 193
Query: 241 DIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVITSFKDTCYIEILPNVE 300
+ Y + Y + + + WG + L+A + + I V+ + T I
Sbjct: 194 EAGNFYTREDFLRYCDDIVHNASWGGQLELRALSHVLQTPIEVVQANSPTIVIG-EEYTR 252
Query: 301 RSIRVIYLSFWAEV--HYNSIYP 321
+ + ++YL + + HYNS+ P
Sbjct: 253 KPVTLVYLHYACDFGEHYNSVKP 275
>sp|Q8N6M0|OTU6B_HUMAN OTU domain-containing protein 6B OS=Homo sapiens GN=OTUD6B PE=1
SV=1
Length = 293
Score = 36.6 bits (83), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 184 LDHQRLLERLQVYDLVEHKVQGDGNCQFRALSDQIY-------------RTAEHHEFVRQ 230
++ ++L + L L ++ DG+C ++A+ DQ+ +TAE+ + +
Sbjct: 133 MESEKLAQILAARQLEIKQIPSDGHCMYKAIEDQLKEKDCALTVVALRSQTAEYMQSHVE 192
Query: 231 QIVAQLKSNPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVITS 286
+ L +NP+ + Y P + Y E + + WG + L+A + + I +I +
Sbjct: 193 DFLPFL-TNPNTGDMYTPEEFQKYCEDIVNTAAWGGQLELRALSHILQTPIEIIQA 247
>sp|Q5ZIP6|OTU6B_CHICK OTU domain-containing protein 6B OS=Gallus gallus GN=OTUD6B PE=2
SV=1
Length = 302
Score = 36.2 bits (82), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 18/116 (15%)
Query: 184 LDHQRLLERLQVYDLVEHKVQGDGNCQFRALSDQIYRTAEHHE-----FVRQQIVAQLKS 238
L+ Q+L L L ++ DG+C +RA+ DQ+ +HH +R Q + S
Sbjct: 142 LESQKLASLLAARHLEIKQIPSDGHCMYRAIEDQL---KDHHNSWTVATLRNQTAKYIHS 198
Query: 239 ----------NPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVI 284
NP+ + Y + Y + ++ + WG + L+A + + I V+
Sbjct: 199 HFDDFLPFLTNPNTGDMYSKEEFEKYCDDIANTAAWGGQLELRALSHILQTPIEVV 254
>sp|P21599|KPYK2_ECOLI Pyruvate kinase II OS=Escherichia coli (strain K12) GN=pykA PE=1
SV=3
Length = 480
Score = 35.8 bits (81), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 73 QLAVSEASESPHETEENLQGPVFQHGWVNHSVGGYYSGQETGQEEADDTQPSSLCSSHEE 132
QL V E TE + GP+ + +N GG + T +++AD + + +
Sbjct: 135 QLKVLEVQGMKVFTEVTVGGPLSNNKGINKLGGGLSAEALTEKDKADIKTAALIGVDYLA 194
Query: 133 VSY--CGEEWSYPQELTDEYALDGEV 156
VS+ CGE+ +Y + L + D ++
Sbjct: 195 VSFPRCGEDLNYARRLARDAGCDAKI 220
>sp|Q8ZNW0|KPYK2_SALTY Pyruvate kinase II OS=Salmonella typhimurium (strain LT2 / SGSC1412
/ ATCC 700720) GN=pykA PE=3 SV=3
Length = 480
Score = 35.4 bits (80), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 73 QLAVSEASESPHETEENLQGPVFQHGWVNHSVGGYYSGQETGQEEADDTQPSSLCSSHEE 132
QL V E TE + GP+ + +N GG + T +++AD + + +
Sbjct: 135 QLKVLEVQGMKVFTEVTVGGPLSNNKGINKLGGGLSAEALTEKDKADIQTAALIGVDYLA 194
Query: 133 VSY--CGEEWSYPQELTDEYALDGEV 156
VS+ CGE+ +Y + L + D ++
Sbjct: 195 VSFPRCGEDLNYARRLARDAGCDAKI 220
>sp|P36999|RLMA_ECOLI 23S rRNA (guanine(745)-N(1))-methyltransferase OS=Escherichia coli
(strain K12) GN=rlmA PE=1 SV=1
Length = 269
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 24/141 (17%)
Query: 199 VEHKVQGD-GNCQFRALSDQIYRTAEHHEFVRQQIVAQLKSNPD----------IYEGYV 247
V+HK D G+ + + + A H++ +R IVAQL+ D EGY
Sbjct: 40 VQHKRSRDPGDSAEMMQARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYY 99
Query: 248 PMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVITS-----FKDTCYIEILPNVERS 302
A+ D L +++ G V ++AAA Y F + S F DT +++
Sbjct: 100 THAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDT-------SMDAI 152
Query: 303 IRVIYLSFWAEVHYNSIYPAG 323
IR IY AE + P G
Sbjct: 153 IR-IYAPCKAEELARVVKPGG 172
>sp|Q6TQR6|L_CCHFI RNA-directed RNA polymerase L OS=Crimean-Congo hemorrhagic fever
virus (strain Nigeria/IbAr10200/1970) GN=L PE=1 SV=2
Length = 3945
Score = 32.3 bits (72), Expect = 5.7, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 192 RLQVYDLVEHKVQ-GDGNCQFRALSDQIY--RTAEHHEFVRQ--QIVAQLKSNPDIYEGY 246
R + D E Q GDGNC + ++++ +T + ++++ + A+ +
Sbjct: 22 RFNISDYFEIVRQPGDGNCFYHSIAELTMPNKTDHSYHYIKRLTESAARKYYQEEPEARL 81
Query: 247 VPMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVIT 285
V ++ DYL++M EWG + A G+ I + T
Sbjct: 82 VGLSLEDYLKRMLSDNEWGSTLEASMLAKEMGITIIIWT 120
>sp|Q9UUK3|OTU2_SCHPO Ubiquitin thioesterase otu2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=otu2 PE=4 SV=1
Length = 324
Score = 32.0 bits (71), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 198 LVEHKVQGDGNCQFRALSDQI---YRTAEHHEFVRQQIVAQLKSNPDIYEGYV------- 247
LV + DGNC F ++S Q+ + + + +R + + + + +EG++
Sbjct: 185 LVAVDIPADGNCLFASISHQLNYHHNVKLNSQALRNKSADYVLKHCEQFEGFLLDEESGE 244
Query: 248 PMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFV 283
+ DY ++ + +WG + +QA A+ V + V
Sbjct: 245 VLPVSDYCNEIRNNSKWGSDIEIQALANSLEVPVHV 280
>sp|P38747|OTU2_YEAST OTU domain-containing protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=OTU2 PE=1 SV=1
Length = 307
Score = 31.6 bits (70), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 175 EIPSIDEATLDHQRLLERLQVYDLVEHKVQGDGNCQFRALSDQIYRTAEHHEFVRQQIVA 234
++ +++ ++D L++L+ +D +Q DG+C F ++ DQ+ + + + V
Sbjct: 149 DLKKMEQESIDQLCELKKLKQFD-----IQPDGHCLFASILDQLKLRHDPKKLDQDMDVM 203
Query: 235 QLKSNPDIY-----EGYVP-------MAYGD---YLEKMSESGEWGDHVTLQAAADLYGV 279
+L+ Y + ++P M D Y ++M + +WG + + A + ++
Sbjct: 204 KLRWLSCNYVQEHRDDFIPYLFDEETMKMKDIDEYTKEMEHTAQWGGEIEILALSHVFDC 263
Query: 280 KIFVITSFKDT-CYIEILPNVERSIRVIYL--SFWAEVHYNSIYPA 322
I ++ S + Y E N E ++++Y S+ HYNS++ +
Sbjct: 264 PISILMSGRPIQVYNECGKNPE--LKLVYYKHSYALGEHYNSLHDS 307
>sp|A1IGV8|AAGAR_THASX Alpha-agarase OS=Thalassomonas agarivorans GN=agaA33 PE=1 SV=1
Length = 1463
Score = 31.6 bits (70), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 13/72 (18%)
Query: 223 EHHEFVRQQIVAQLKSNPDIYEGYVPMA----------YGDYLEKMSESGEWGDHVTLQA 272
E FV ++ S D EG+ P A YGDY+ E G +G ++T+ A
Sbjct: 704 ELESFVFTSTNGRVGS--DSVEGFSPTATGVNWVTNGDYGDYMVTFEEPGTYGAYITISA 761
Query: 273 AAD-LYGVKIFV 283
A D YG ++ V
Sbjct: 762 ANDGSYGARVDV 773
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.134 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 138,660,515
Number of Sequences: 539616
Number of extensions: 6090068
Number of successful extensions: 14820
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 14780
Number of HSP's gapped (non-prelim): 56
length of query: 340
length of database: 191,569,459
effective HSP length: 118
effective length of query: 222
effective length of database: 127,894,771
effective search space: 28392639162
effective search space used: 28392639162
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)