Query 019514
Match_columns 340
No_of_seqs 131 out of 1641
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 02:22:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019514.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019514hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00817 tpt Tpt phosphate/ph 100.0 1.4E-36 3E-41 272.9 29.3 290 12-305 2-296 (302)
2 PTZ00343 triose or hexose phos 100.0 5.6E-36 1.2E-40 272.7 31.4 291 10-303 47-349 (350)
3 KOG1441 Glucose-6-phosphate/ph 100.0 3.6E-36 7.9E-41 263.5 21.1 301 6-309 11-314 (316)
4 PLN00411 nodulin MtN21 family 100.0 2.6E-30 5.6E-35 234.6 30.5 291 10-307 11-333 (358)
5 KOG1444 Nucleotide-sugar trans 100.0 9.2E-31 2E-35 224.2 24.4 307 3-311 3-309 (314)
6 PF06027 DUF914: Eukaryotic pr 100.0 5.4E-30 1.2E-34 227.7 26.8 296 6-308 7-311 (334)
7 KOG1443 Predicted integral mem 100.0 1.5E-28 3.2E-33 207.6 21.0 293 7-301 11-314 (349)
8 PF08449 UAA: UAA transporter 100.0 1.9E-27 4.1E-32 213.4 28.2 278 26-307 14-302 (303)
9 PRK11689 aromatic amino acid e 100.0 2.3E-26 5E-31 205.6 29.6 271 8-304 4-289 (295)
10 PRK11272 putative DMT superfam 100.0 5E-26 1.1E-30 203.3 30.8 272 13-305 13-288 (292)
11 PRK15430 putative chlorampheni 100.0 2.1E-26 4.5E-31 206.0 27.6 283 6-307 6-290 (296)
12 PRK11453 O-acetylserine/cystei 100.0 1.4E-25 3E-30 201.1 30.0 279 8-304 4-289 (299)
13 PRK10532 threonine and homoser 100.0 2.7E-25 5.8E-30 198.6 31.2 278 2-304 2-283 (293)
14 TIGR00950 2A78 Carboxylate/Ami 99.9 3.5E-25 7.5E-30 194.9 25.6 251 29-297 6-259 (260)
15 KOG1442 GDP-fucose transporter 99.9 1E-27 2.2E-32 199.2 6.6 304 10-314 26-339 (347)
16 COG5070 VRG4 Nucleotide-sugar 99.9 8.2E-25 1.8E-29 176.8 16.8 286 15-308 9-302 (309)
17 KOG3912 Predicted integral mem 99.9 1.3E-22 2.8E-27 169.5 20.0 291 14-304 5-336 (372)
18 TIGR03340 phn_DUF6 phosphonate 99.9 2E-22 4.3E-27 179.1 20.3 263 27-299 16-280 (281)
19 TIGR00688 rarD rarD protein. T 99.9 1.4E-20 3.1E-25 165.1 25.6 248 9-277 3-255 (256)
20 KOG1581 UDP-galactose transpor 99.9 1.4E-19 3E-24 153.6 25.1 262 39-306 47-317 (327)
21 COG0697 RhaT Permeases of the 99.9 8.7E-19 1.9E-23 156.4 31.1 261 27-303 22-288 (292)
22 COG5006 rhtA Threonine/homoser 99.9 2.9E-19 6.2E-24 147.7 23.8 253 28-304 28-284 (292)
23 KOG2234 Predicted UDP-galactos 99.9 1.4E-18 3E-23 151.7 28.4 288 16-307 19-327 (345)
24 KOG1580 UDP-galactose transpor 99.8 1.6E-20 3.5E-25 153.2 10.9 257 39-302 49-313 (337)
25 PF04142 Nuc_sug_transp: Nucle 99.8 2.1E-19 4.6E-24 154.8 18.2 212 78-293 16-244 (244)
26 COG2962 RarD Predicted permeas 99.8 9.4E-18 2E-22 142.6 27.5 286 5-310 4-291 (293)
27 KOG2765 Predicted membrane pro 99.8 9.6E-19 2.1E-23 152.4 18.6 224 80-305 160-393 (416)
28 TIGR00776 RhaT RhaT L-rhamnose 99.8 1.3E-17 2.8E-22 148.4 26.0 264 11-302 4-288 (290)
29 KOG1582 UDP-galactose transpor 99.8 2.1E-18 4.5E-23 143.8 13.8 292 7-304 37-334 (367)
30 KOG4510 Permease of the drug/m 99.8 2.8E-20 6.1E-25 154.7 2.0 277 10-304 37-327 (346)
31 KOG2766 Predicted membrane pro 99.8 1.1E-18 2.3E-23 144.3 6.3 279 7-302 13-299 (336)
32 KOG1583 UDP-N-acetylglucosamin 99.7 4.3E-17 9.3E-22 136.5 11.7 269 29-307 20-319 (330)
33 PF03151 TPT: Triose-phosphate 99.7 1.1E-16 2.3E-21 129.3 13.7 143 160-302 1-153 (153)
34 KOG4314 Predicted carbohydrate 99.4 1.5E-12 3.3E-17 104.1 9.0 226 74-304 48-278 (290)
35 TIGR00803 nst UDP-galactose tr 99.4 4.3E-12 9.4E-17 108.8 10.0 193 104-300 3-222 (222)
36 PF00892 EamA: EamA-like trans 99.3 2.1E-11 4.5E-16 94.6 7.9 118 27-149 6-124 (126)
37 COG2510 Predicted membrane pro 99.2 1.1E-10 2.3E-15 87.1 10.8 132 13-151 8-139 (140)
38 COG2510 Predicted membrane pro 99.2 5.8E-11 1.3E-15 88.4 8.3 135 160-301 4-138 (140)
39 PF06800 Sugar_transport: Suga 99.2 7.3E-09 1.6E-13 89.3 19.6 209 77-299 43-268 (269)
40 PF13536 EmrE: Multidrug resis 99.1 1.1E-10 2.5E-15 88.8 7.1 107 48-155 2-110 (113)
41 PF00892 EamA: EamA-like trans 99.1 5.1E-10 1.1E-14 86.7 9.7 124 169-301 1-125 (126)
42 TIGR00688 rarD rarD protein. T 98.9 4.1E-08 8.8E-13 86.1 15.0 137 160-301 3-141 (256)
43 PRK15430 putative chlorampheni 98.9 4.9E-08 1.1E-12 87.5 14.7 142 154-301 3-144 (296)
44 TIGR00950 2A78 Carboxylate/Ami 98.9 1E-07 2.2E-12 83.7 15.0 129 11-147 131-260 (260)
45 TIGR03340 phn_DUF6 phosphonate 98.8 2.1E-07 4.6E-12 82.8 14.4 133 161-302 3-135 (281)
46 PLN00411 nodulin MtN21 family 98.7 7.1E-07 1.5E-11 81.6 15.0 138 159-302 13-156 (358)
47 PF05653 Mg_trans_NIPA: Magnes 98.6 2.6E-07 5.6E-12 82.3 8.8 207 87-304 58-294 (300)
48 PRK13499 rhamnose-proton sympo 98.6 3.4E-05 7.3E-10 69.5 22.0 224 77-302 71-341 (345)
49 PRK15051 4-amino-4-deoxy-L-ara 98.5 1.7E-06 3.6E-11 65.3 10.5 64 87-150 45-108 (111)
50 PF03151 TPT: Triose-phosphate 98.4 1.2E-05 2.5E-10 64.6 13.9 129 21-150 9-152 (153)
51 PRK11272 putative DMT superfam 98.4 6E-06 1.3E-10 73.9 13.1 109 43-152 177-286 (292)
52 PRK11689 aromatic amino acid e 98.3 1.8E-05 3.9E-10 70.9 13.7 129 159-301 4-136 (295)
53 PRK10532 threonine and homoser 98.2 2.9E-05 6.3E-10 69.5 14.0 118 26-150 162-280 (293)
54 PRK11453 O-acetylserine/cystei 98.2 4.2E-05 9.1E-10 68.7 14.3 124 161-301 6-131 (299)
55 COG2962 RarD Predicted permeas 98.2 3.3E-05 7.2E-10 66.6 12.3 141 157-303 5-145 (293)
56 PRK02971 4-amino-4-deoxy-L-ara 98.2 4.1E-05 8.9E-10 59.2 11.8 118 159-302 2-122 (129)
57 TIGR00817 tpt Tpt phosphate/ph 98.2 1.1E-05 2.3E-10 72.6 9.9 126 25-151 158-293 (302)
58 PTZ00343 triose or hexose phos 98.1 0.00011 2.3E-09 67.5 15.7 138 157-301 47-185 (350)
59 COG4975 GlcU Putative glucose 98.1 1.1E-06 2.3E-11 73.5 0.7 240 43-301 28-284 (288)
60 PF13536 EmrE: Multidrug resis 98.0 8.3E-05 1.8E-09 56.4 10.8 72 232-304 36-108 (113)
61 KOG2922 Uncharacterized conser 98.0 3.7E-05 7.9E-10 67.1 9.1 209 86-301 71-305 (335)
62 PRK02971 4-amino-4-deoxy-L-ara 97.9 4.1E-05 9E-10 59.2 6.7 72 81-152 50-123 (129)
63 PF06027 DUF914: Eukaryotic pr 97.9 0.00034 7.5E-09 63.1 13.1 140 159-304 13-153 (334)
64 PF08449 UAA: UAA transporter 97.9 0.0004 8.7E-09 62.4 13.6 129 170-307 11-141 (303)
65 PRK15051 4-amino-4-deoxy-L-ara 97.8 0.00039 8.5E-09 52.4 10.3 56 246-301 53-108 (111)
66 TIGR00776 RhaT RhaT L-rhamnose 97.8 0.00041 9E-09 61.9 12.1 127 12-150 152-287 (290)
67 PRK10452 multidrug efflux syst 97.7 0.00039 8.5E-09 52.8 9.5 71 82-152 33-104 (120)
68 PF04657 DUF606: Protein of un 97.7 0.0016 3.6E-08 51.0 13.1 132 160-299 2-138 (138)
69 COG0697 RhaT Permeases of the 97.7 0.0015 3.3E-08 57.8 14.8 140 157-304 5-145 (292)
70 PRK10452 multidrug efflux syst 97.7 0.00056 1.2E-08 52.0 9.6 55 249-303 49-104 (120)
71 PRK09541 emrE multidrug efflux 97.6 0.001 2.2E-08 49.9 9.6 69 84-152 35-104 (110)
72 COG2076 EmrE Membrane transpor 97.5 0.00088 1.9E-08 49.2 8.6 69 82-150 33-102 (106)
73 PRK11431 multidrug efflux syst 97.5 0.0013 2.9E-08 48.7 9.3 68 83-150 33-101 (105)
74 PRK10650 multidrug efflux syst 97.5 0.002 4.4E-08 48.0 10.1 68 82-149 38-106 (109)
75 PRK09541 emrE multidrug efflux 97.4 0.0016 3.4E-08 48.9 9.2 54 249-302 49-103 (110)
76 PRK10650 multidrug efflux syst 97.3 0.0068 1.5E-07 45.3 11.3 53 249-301 54-107 (109)
77 PRK11431 multidrug efflux syst 97.2 0.0034 7.3E-08 46.6 8.8 54 249-302 48-102 (105)
78 COG2076 EmrE Membrane transpor 97.2 0.0039 8.5E-08 45.9 8.9 55 249-303 49-104 (106)
79 PF07857 DUF1632: CEO family ( 97.2 0.001 2.2E-08 57.5 6.8 132 160-307 1-139 (254)
80 PF04142 Nuc_sug_transp: Nucle 97.1 0.0018 4E-08 56.0 7.6 75 231-305 18-92 (244)
81 COG3238 Uncharacterized protei 97.1 0.03 6.5E-07 44.1 13.0 138 157-301 3-145 (150)
82 PF00893 Multi_Drug_Res: Small 97.0 0.0076 1.7E-07 43.8 9.0 58 85-142 35-93 (93)
83 COG5006 rhtA Threonine/homoser 97.0 0.015 3.1E-07 49.5 11.2 101 44-147 177-278 (292)
84 PF04657 DUF606: Protein of un 97.0 0.037 8.1E-07 43.4 12.9 127 18-148 7-138 (138)
85 PRK13499 rhamnose-proton sympo 96.8 0.018 3.9E-07 52.2 11.2 143 157-307 5-158 (345)
86 PF06800 Sugar_transport: Suga 96.7 0.031 6.6E-07 48.7 11.8 71 76-147 193-267 (269)
87 PF05653 Mg_trans_NIPA: Magnes 96.7 0.01 2.2E-07 53.1 8.9 119 156-302 4-122 (300)
88 COG3238 Uncharacterized protei 96.4 0.12 2.6E-06 40.7 12.0 134 14-150 7-145 (150)
89 PF10639 UPF0546: Uncharacteri 96.4 0.01 2.2E-07 44.5 5.6 70 79-149 42-112 (113)
90 TIGR00803 nst UDP-galactose tr 96.3 0.087 1.9E-06 44.9 12.0 67 82-148 155-221 (222)
91 KOG4510 Permease of the drug/m 96.1 0.0018 3.9E-08 55.3 0.4 136 159-306 38-173 (346)
92 KOG2234 Predicted UDP-galactos 96.0 0.26 5.7E-06 44.2 13.6 138 161-301 17-163 (345)
93 KOG1580 UDP-galactose transpor 95.7 0.036 7.9E-07 46.6 6.5 64 244-307 99-162 (337)
94 PF00893 Multi_Drug_Res: Small 95.7 0.051 1.1E-06 39.5 6.5 46 248-293 47-93 (93)
95 KOG1441 Glucose-6-phosphate/ph 95.7 0.019 4.2E-07 51.3 5.1 141 10-151 161-307 (316)
96 COG4975 GlcU Putative glucose 95.2 0.0085 1.8E-07 50.7 1.3 129 160-302 3-136 (288)
97 KOG2765 Predicted membrane pro 95.0 0.19 4.1E-06 45.4 9.1 144 6-153 245-392 (416)
98 KOG1581 UDP-galactose transpor 94.6 0.54 1.2E-05 41.4 10.7 137 11-148 171-310 (327)
99 KOG1444 Nucleotide-sugar trans 92.3 4.9 0.00011 35.8 12.9 133 160-301 13-148 (314)
100 PF06379 RhaT: L-rhamnose-prot 92.0 4.9 0.00011 36.3 12.7 144 158-307 6-158 (344)
101 PF10639 UPF0546: Uncharacteri 89.5 0.71 1.5E-05 34.6 4.4 49 251-299 62-111 (113)
102 PF06379 RhaT: L-rhamnose-prot 88.8 18 0.00039 32.8 20.5 225 76-301 70-339 (344)
103 KOG2922 Uncharacterized conser 87.7 0.15 3.2E-06 45.2 -0.3 121 156-304 18-138 (335)
104 PF07168 Ureide_permease: Urei 87.5 0.96 2.1E-05 39.9 4.5 134 165-301 2-145 (336)
105 KOG4314 Predicted carbohydrate 84.6 0.42 9E-06 39.2 0.9 62 241-302 64-125 (290)
106 COG5070 VRG4 Nucleotide-sugar 83.9 13 0.00028 31.5 9.2 67 79-145 224-290 (309)
107 PRK02237 hypothetical protein; 83.0 15 0.00033 27.1 8.2 48 257-304 60-107 (109)
108 PF02694 UPF0060: Uncharacteri 82.3 8.4 0.00018 28.4 6.7 47 258-304 59-105 (107)
109 PF05977 MFS_3: Transmembrane 79.4 65 0.0014 31.4 22.2 49 252-300 342-390 (524)
110 PF05297 Herpes_LMP1: Herpesvi 79.3 0.6 1.3E-05 40.4 0.0 96 101-197 45-144 (381)
111 PF07857 DUF1632: CEO family ( 77.5 46 0.001 29.0 11.0 102 42-151 26-134 (254)
112 PF04342 DUF486: Protein of un 75.2 30 0.00066 25.5 8.1 55 95-149 51-106 (108)
113 KOG4831 Unnamed protein [Funct 74.2 4 8.6E-05 29.9 3.0 71 78-149 52-123 (125)
114 PF08507 COPI_assoc: COPI asso 69.8 50 0.0011 25.6 11.5 37 266-303 70-106 (136)
115 KOG3912 Predicted integral mem 69.2 8.8 0.00019 33.7 4.5 55 248-302 104-158 (372)
116 PF04342 DUF486: Protein of un 69.1 3 6.5E-05 30.6 1.4 29 271-299 77-105 (108)
117 KOG1442 GDP-fucose transporter 68.0 27 0.00058 30.7 7.1 120 29-149 202-325 (347)
118 KOG2766 Predicted membrane pro 62.7 2.1 4.5E-05 36.9 -0.4 61 243-303 91-151 (336)
119 PF11139 DUF2910: Protein of u 57.0 1.2E+02 0.0026 25.5 10.6 47 22-68 44-90 (214)
120 TIGR02865 spore_II_E stage II 55.2 2.6E+02 0.0056 28.9 13.2 44 106-149 11-54 (764)
121 PRK13108 prolipoprotein diacyl 55.1 1.2E+02 0.0026 29.1 9.7 24 282-305 254-277 (460)
122 PRK15432 autoinducer 2 ABC tra 52.9 28 0.00061 31.9 5.2 24 283-306 287-310 (344)
123 PF06609 TRI12: Fungal trichot 52.7 2.5E+02 0.0054 28.0 21.1 45 16-60 242-288 (599)
124 PRK02935 hypothetical protein; 50.3 69 0.0015 23.6 5.6 30 283-312 41-70 (110)
125 PF06679 DUF1180: Protein of u 47.6 28 0.00062 28.0 3.7 7 325-331 138-144 (163)
126 PRK02237 hypothetical protein; 46.2 94 0.002 23.1 5.9 44 108-151 62-105 (109)
127 PLN00028 nitrate transmembrane 45.2 2.8E+02 0.0061 26.4 12.9 20 257-276 383-402 (476)
128 PF02694 UPF0060: Uncharacteri 44.1 71 0.0015 23.6 5.0 45 108-152 60-104 (107)
129 COG1742 Uncharacterized conser 43.2 78 0.0017 23.3 5.0 45 259-303 61-105 (109)
130 KOG1582 UDP-galactose transpor 43.0 1.4E+02 0.0031 26.3 7.4 131 169-307 53-183 (367)
131 PRK09412 anaerobic C4-dicarbox 42.6 2.5E+02 0.0053 26.7 9.8 12 120-131 8-19 (433)
132 PF06570 DUF1129: Protein of u 41.8 2.1E+02 0.0045 23.9 12.0 10 124-133 194-203 (206)
133 COG5336 Uncharacterized protei 36.4 1.7E+02 0.0036 21.8 5.8 36 267-302 56-92 (116)
134 PRK06638 NADH:ubiquinone oxido 35.4 2.6E+02 0.0057 23.3 10.5 30 272-301 134-165 (198)
135 PF05961 Chordopox_A13L: Chord 35.3 50 0.0011 22.0 2.8 22 286-307 6-27 (68)
136 PF08627 CRT-like: CRT-like; 35.0 1.3E+02 0.0029 23.0 5.4 52 8-60 53-104 (130)
137 TIGR00892 2A0113 monocarboxyla 34.3 4.1E+02 0.0088 25.1 11.3 12 287-298 404-415 (455)
138 PF05977 MFS_3: Transmembrane 34.1 4.6E+02 0.0099 25.6 14.2 78 103-180 251-330 (524)
139 KOG1583 UDP-N-acetylglucosamin 34.1 20 0.00043 31.5 1.0 45 263-307 98-142 (330)
140 PF15102 TMEM154: TMEM154 prot 32.7 38 0.00082 26.6 2.3 22 289-310 68-89 (146)
141 PF07444 Ycf66_N: Ycf66 protei 31.8 43 0.00094 23.6 2.2 27 280-306 3-29 (84)
142 PF15345 TMEM51: Transmembrane 30.8 69 0.0015 27.3 3.6 22 289-310 68-89 (233)
143 PF13937 DUF4212: Domain of un 29.6 2E+02 0.0044 20.2 6.0 52 11-62 12-66 (81)
144 COG5522 Predicted integral mem 29.4 3.5E+02 0.0075 22.8 7.3 62 2-66 148-224 (236)
145 KOG1623 Multitransmembrane pro 29.0 1.7E+02 0.0036 25.4 5.7 20 282-301 186-205 (243)
146 PF10710 DUF2512: Protein of u 27.4 3E+02 0.0065 21.4 11.6 32 248-279 50-82 (136)
147 PHA03049 IMV membrane protein; 27.3 92 0.002 20.7 3.0 22 286-307 6-27 (68)
148 KOG1479 Nucleoside transporter 27.2 5.3E+02 0.012 24.3 13.5 41 263-303 161-203 (406)
149 COG2271 UhpC Sugar phosphate p 26.3 5.8E+02 0.012 24.3 10.1 49 258-307 161-210 (448)
150 PF11446 DUF2897: Protein of u 25.3 1.2E+02 0.0026 19.5 3.2 15 290-304 8-22 (55)
151 PRK09584 tppB putative tripept 25.0 6.2E+02 0.014 24.3 24.5 29 27-55 166-194 (500)
152 PF06123 CreD: Inner membrane 24.2 6.3E+02 0.014 24.1 12.3 56 127-184 319-376 (430)
153 TIGR03644 marine_trans_1 proba 24.1 6.1E+02 0.013 23.9 16.2 25 156-180 292-316 (404)
154 TIGR00770 Dcu anaerobic c4-dic 23.8 6.4E+02 0.014 24.0 9.9 12 120-131 4-15 (430)
155 PF11044 TMEMspv1-c74-12: Plec 23.6 27 0.00059 21.1 0.1 13 295-307 21-33 (49)
156 PF13038 DUF3899: Domain of un 22.9 59 0.0013 23.2 1.7 18 284-301 4-21 (92)
157 PF11027 DUF2615: Protein of u 22.4 2.2E+02 0.0049 21.0 4.6 20 286-305 56-75 (103)
158 COG1742 Uncharacterized conser 22.3 3.3E+02 0.0071 20.1 9.3 41 112-152 65-105 (109)
159 PF01528 Herpes_glycop: Herpes 21.7 6.6E+02 0.014 23.4 10.9 15 1-15 1-15 (374)
160 TIGR00939 2a57 Equilibrative N 21.7 7E+02 0.015 23.7 9.2 15 287-301 179-193 (437)
161 PF09948 DUF2182: Predicted me 21.6 4.7E+02 0.01 21.7 9.2 133 10-147 40-189 (191)
162 COG3086 RseC Positive regulato 21.6 1.7E+02 0.0036 23.1 4.0 27 252-278 70-96 (150)
163 KOG1623 Multitransmembrane pro 21.5 1.3E+02 0.0029 25.9 3.8 53 132-184 95-153 (243)
164 COG1971 Predicted membrane pro 21.5 1.2E+02 0.0026 25.2 3.3 44 256-299 40-84 (190)
165 PF09930 DUF2162: Predicted tr 21.4 5.2E+02 0.011 22.1 12.5 48 72-119 95-142 (224)
166 COG2323 Predicted membrane pro 21.0 5.3E+02 0.012 22.0 8.9 33 43-75 3-35 (224)
167 TIGR02587 putative integral me 20.7 5.9E+02 0.013 22.4 7.6 23 272-294 84-109 (271)
168 PF03547 Mem_trans: Membrane t 20.5 6.6E+02 0.014 23.0 12.6 6 204-209 41-46 (385)
169 PRK12437 prolipoprotein diacyl 20.1 93 0.002 27.4 2.7 21 282-302 235-255 (269)
No 1
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=1.4e-36 Score=272.87 Aligned_cols=290 Identities=26% Similarity=0.428 Sum_probs=239.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHHHHHHH
Q 019514 12 RSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCI 91 (340)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (340)
+.......|++.++..++.||++++ ++++|+++++.|+.++.+.+.+..+ .+.++.++. ++++++..++.|++++.
T Consensus 2 ~~~~~~~~w~~~~~~~~~~NK~~l~--~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~g~~~~~ 77 (302)
T TIGR00817 2 QTGLLFGLWYFLNVYFNIYNKKLLN--VFPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLKI-SSALLKLLLPVAIVHTI 77 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--hCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCC-CHHHHHHHHHHHHHHHH
Confidence 4577899999999999999999999 5888999999999999877665422 222223333 36689999999999999
Q ss_pred HHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeecccccchHHHHHHHHHHHHHH
Q 019514 92 NIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLAT 171 (340)
Q Consensus 92 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~~~~~~~G~~~~l~~~~~~ 171 (340)
...+.+.+++|++++.++++++++|+++++++++++|||++++++.+++++++|+.+...++.+.+..|+++++++++++
T Consensus 78 ~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~ 157 (302)
T TIGR00817 78 GHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITF 157 (302)
T ss_pred HHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999877666677788999999999999
Q ss_pred HHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchh--hhccc--CCCchHHHHHHHHHHH-HHHHHHHH
Q 019514 172 STKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIM--DWLST--HPSPWSAFIIIFSSGV-LAFCLNFS 246 (340)
Q Consensus 172 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~l~~~~~-~~~~~~~~ 246 (340)
+.|.++.|+..++++.|+.+++.|+...+.+.+.|.....|+.+.. ++... .......+...+..+. +...++..
T Consensus 158 a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (302)
T TIGR00817 158 VSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQV 237 (302)
T ss_pred HHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998875568999999999999999999988776653321 11111 0111122332333333 34445556
Q ss_pred HHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhhh
Q 019514 247 IFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRH 305 (340)
Q Consensus 247 ~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~~ 305 (340)
.+..+++++|++.++.++++|+.++++|++++||++|+.+++|.++++.|+.+|++.+.
T Consensus 238 ~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~ 296 (302)
T TIGR00817 238 AFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKA 296 (302)
T ss_pred HHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence 67889999999999999999999999999999999999999999999999999997543
No 2
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=5.6e-36 Score=272.74 Aligned_cols=291 Identities=24% Similarity=0.410 Sum_probs=248.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCC-cchhhHHhHHHHHH
Q 019514 10 VFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVE-PEDRWRRIFPMSFV 88 (340)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 88 (340)
+++...++.+|++.++.....||++++ ++|+|++++++|++++.+++..+.. .+.++.++.+ ++.+++..++.|++
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~--~~~~P~~l~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~llp~gl~ 123 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALN--MLPLPWTISSLQLFVGWLFALLYWA-TGFRKIPRIKSLKLFLKNFLPQGLC 123 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHH--hCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 789999999999999999999999999 5788999999999999877655432 2333333333 45688999999999
Q ss_pred HHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeecccccchHHHHHHHHHHH
Q 019514 89 FCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGC 168 (340)
Q Consensus 89 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~~~~~~~G~~~~l~~~ 168 (340)
+...+...+.|+++++++.+++++++.|+++++++++++|||++++++.+++++++|+.+.+.++.+.++.|++++++++
T Consensus 124 ~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~ 203 (350)
T PTZ00343 124 HLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSN 203 (350)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHH
Confidence 98778888899999999999999999999999999999999999999999999999999999888888889999999999
Q ss_pred HHHHHHHHHHHHHhccC-----CCChHHHHHHHHHHHHHHHHHHHHHhcccchh-hhc----ccCCC-chHHHHHHHHHH
Q 019514 169 LATSTKTILAESLLHSY-----KFDSINTVYYMAPFATMILSIPALLLEGSGIM-DWL----STHPS-PWSAFIIIFSSG 237 (340)
Q Consensus 169 ~~~a~~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~-~~~~~~~l~~~~ 237 (340)
+++|.++++.|+..++. +.++.++..+..+.+.++++|+....|..... .+. ..... ....+..++.++
T Consensus 204 ~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~ 283 (350)
T PTZ00343 204 LGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSG 283 (350)
T ss_pred HHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHH
Confidence 99999999999988753 35677788888899999999998877653221 111 01111 123445677788
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhh
Q 019514 238 VLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYI 303 (340)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~ 303 (340)
+..+++|...+.++++++|.+.++.++++|+++++.|++++||++|+.+++|.++++.|+++|+..
T Consensus 284 l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 284 VWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred HHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence 888888999999999999999999999999999999999999999999999999999999999864
No 3
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=3.6e-36 Score=263.52 Aligned_cols=301 Identities=40% Similarity=0.674 Sum_probs=266.9
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHH
Q 019514 6 CTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPM 85 (340)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (340)
..++..........|++.++.....||+++++++|++|++++..++..+.+..... +..|..+.++.+++.+++..+++
T Consensus 11 ~~~~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~-~~l~~~~~~~~~~~~~~~~llpl 89 (316)
T KOG1441|consen 11 QLKKILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVI-KVLKLVPPSKISSKLPLRTLLPL 89 (316)
T ss_pred ccchhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHH-HHhcCCCCCccccccchHHHHHH
Confidence 33456777888999999999999999999999999999999999888888776664 55666666666667899999999
Q ss_pred HHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeecccccchHHHHHHHH
Q 019514 86 SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAAL 165 (340)
Q Consensus 86 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~~~~~~~G~~~~l 165 (340)
|++++.+..+.+.++.++|++++|+++++.|+++.++++++.+|++++..+.+++.++.|+.+.+.+|.++|+.|++.++
T Consensus 90 ~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~ 169 (316)
T KOG1441|consen 90 GLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAM 169 (316)
T ss_pred HHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh--ccCCCChHHHHHHHHHHHHHHHH-HHHHHhcccchhhhcccCCCchHHHHHHHHHHHHHHH
Q 019514 166 FGCLATSTKTILAESLL--HSYKFDSINTVYYMAPFATMILS-IPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFC 242 (340)
Q Consensus 166 ~~~~~~a~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (340)
++.+..++++++.|+.+ |+++.|+.+++.|..+++...++ |.....|+... .......+....+..++.+ ++++.
T Consensus 170 ~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s-v~~f~ 247 (316)
T KOG1441|consen 170 ISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-VGFLTAPWFVTFLILLLNS-VLAFL 247 (316)
T ss_pred HHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-eeeeccccchhhHHHHHHH-HHHHH
Confidence 99999999999999999 46789999999999999999999 88777666543 1222223344444555555 99999
Q ss_pred HHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhhhhhhC
Q 019514 243 LNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQ 309 (340)
Q Consensus 243 ~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~~~~~~ 309 (340)
+|.+.|.++.+++|++.++.+.+|.+.++..|+++|+++.|+.+..|+++.+.|+.+|++.+.++++
T Consensus 248 ~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~ 314 (316)
T KOG1441|consen 248 LNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK 314 (316)
T ss_pred HHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence 9999999999999999999999999999999999999999999999999999999999988766543
No 4
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=2.6e-30 Score=234.64 Aligned_cols=291 Identities=12% Similarity=0.121 Sum_probs=221.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHHHHH
Q 019514 10 VFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVF 89 (340)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (340)
..+.....+.-.+...++....|..++. +.+ |..+.++|+.++.+++.++...+++++..+...++++......+++.
T Consensus 11 ~~~~~~~~~~~q~~~~~~~~~~k~a~~~-G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g 88 (358)
T PLN00411 11 EAVFLTAMLATETSVVGISTLFKVATSK-GLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG 88 (358)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHC-CCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH
Confidence 5667777778888888899999999975 787 89999999999998888776554432211111233556666677766
Q ss_pred HHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHH------hhcccchhhhhhhhhhhhhceeeecc-cc--------
Q 019514 90 CINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLV------WRKYFDWRIWASLVPIVGGILLTSVT-EL-------- 154 (340)
Q Consensus 90 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~------l~e~~~~~~~~~i~l~~~Gv~i~~~~-~~-------- 154 (340)
...+.+.+.|++|++++.++++.++.|+++.++++++ ++||++++++.|++++++|+.+.... +.
T Consensus 89 ~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~ 168 (358)
T PLN00411 89 SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSP 168 (358)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccc
Confidence 5566688999999999999999999999999999999 69999999999999999999875531 10
Q ss_pred ---------------cch-HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCh-HHHHHHHHHHHHHHHHHHHHHhcccchh
Q 019514 155 ---------------SFN-MFGFCAALFGCLATSTKTILAESLLHSYKFDS-INTVYYMAPFATMILSIPALLLEGSGIM 217 (340)
Q Consensus 155 ---------------~~~-~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (340)
+.+ ..|..+.++++++||.|+++.|+..++ +++ ....+++..++.....+.....+..+..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~--~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~ 246 (358)
T PLN00411 169 PYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSE--YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPS 246 (358)
T ss_pred ccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcc
Confidence 112 459999999999999999999998874 444 4556666666666666655555543222
Q ss_pred hhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhH
Q 019514 218 DWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGC 297 (340)
Q Consensus 218 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~ 297 (340)
.|.. ..+... ..++..++...+.+...++++++.+|.++++..+++|++++++|++++||++++.+++|+++++.|+
T Consensus 247 ~~~~--~~~~~~-~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv 323 (358)
T PLN00411 247 VWII--HFDITL-ITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGF 323 (358)
T ss_pred ccee--ccchHH-HHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHH
Confidence 2211 112222 2344455555455556778999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhh
Q 019514 298 TFYGYIRHLL 307 (340)
Q Consensus 298 ~~~~~~~~~~ 307 (340)
.+..+.++++
T Consensus 324 ~l~~~~~~~~ 333 (358)
T PLN00411 324 YAVMWGKANE 333 (358)
T ss_pred HHHHhhhhhh
Confidence 9988655444
No 5
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.2e-31 Score=224.23 Aligned_cols=307 Identities=21% Similarity=0.339 Sum_probs=266.0
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHh
Q 019514 3 ASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRI 82 (340)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 82 (340)
.+.........+..++.|..+++.+++.||+++++++||..+++...|++++.+.+... +..|..+.++++ ++..|++
T Consensus 3 ~~~~~~~~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~l-k~~~lv~~~~l~-~~~~kk~ 80 (314)
T KOG1444|consen 3 SDEGSKKQSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVL-KRLGLVNFRPLD-LRTAKKW 80 (314)
T ss_pred ccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH-HHhceeecCCcC-hHHHHHH
Confidence 33333445666889999999999999999999999888878888889999999877764 444544555555 4478889
Q ss_pred HHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeecccccchHHHHH
Q 019514 83 FPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFC 162 (340)
Q Consensus 83 ~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~~~~~~~G~~ 162 (340)
+|.++++.++.+....+++|++++++.++++.+|+++++.+..++|.|+++..|.++....+|......+|.+++..|+.
T Consensus 81 ~P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~ 160 (314)
T KOG1444|consen 81 FPVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYS 160 (314)
T ss_pred ccHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHHHHHH
Q 019514 163 AALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFC 242 (340)
Q Consensus 163 ~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (340)
|++..+++.+.+.++.|+..+..+.+.+.+++|+++.+...+.....+.++.+........+.....+..+.++|+++++
T Consensus 161 w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~ 240 (314)
T KOG1444|consen 161 WALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFG 240 (314)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHH
Confidence 99999999999999999999988899999999999999998888888877755222233334556678999999999999
Q ss_pred HHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhhhhhhCCC
Q 019514 243 LNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQP 311 (340)
Q Consensus 243 ~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~~~~~~~~ 311 (340)
.++..++|.+..++++.++++..+...+.+.+.+++|+++++..++|..+.+.|..+|+..+.++++.+
T Consensus 241 isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~ 309 (314)
T KOG1444|consen 241 ISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQP 309 (314)
T ss_pred HHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCC
Confidence 999999999999999999999666777777777777788999999999999999999998876654443
No 6
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.98 E-value=5.4e-30 Score=227.67 Aligned_cols=296 Identities=16% Similarity=0.188 Sum_probs=236.8
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHH
Q 019514 6 CTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPM 85 (340)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (340)
.+|+.++.++..-.-.....+....++++-++ +++.|.+.+++-++...++......+++..+......+.+|++.+..
T Consensus 7 ~~~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~ll 85 (334)
T PF06027_consen 7 FTRRFWIVLLLGQVLSLCITGTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLL 85 (334)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHH
Confidence 45666777776666666666777778888877 89999999999998777665554444333222111223456666777
Q ss_pred HHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeeccc---------ccc
Q 019514 86 SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE---------LSF 156 (340)
Q Consensus 86 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~---------~~~ 156 (340)
++++..++++.+.|++|++++.++++.+++.+++++++++++|+|+++.|++|++++++|+.+....| .+.
T Consensus 86 a~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~ 165 (334)
T PF06027_consen 86 ALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSN 165 (334)
T ss_pred HHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999998876543 223
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHH
Q 019514 157 NMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSS 236 (340)
Q Consensus 157 ~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 236 (340)
...|++++++++++||.++++.|+..+ +.+..+.+.+..+++.++..+.....|..+..+. .+++..+...+..
T Consensus 166 ~i~GDll~l~~a~lya~~nV~~E~~v~--~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~----~w~~~~~~~~v~~ 239 (334)
T PF06027_consen 166 PILGDLLALLGAILYAVSNVLEEKLVK--KAPRVEFLGMLGLFGFIISGIQLAILERSGIESI----HWTSQVIGLLVGY 239 (334)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHHheehhhhhcc----CCChhhHHHHHHH
Confidence 578999999999999999999999998 5588889999999999988888877776555432 1223334555555
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhhhhhh
Q 019514 237 GVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLS 308 (340)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~~~~~ 308 (340)
+++-+..+......+++.+|+..++-..+..+.+++++++++|+++++..++|.+++++|.++|+..+.+..
T Consensus 240 ~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~ 311 (334)
T PF06027_consen 240 ALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEE 311 (334)
T ss_pred HHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCccc
Confidence 555555555556779999999999988889999999999999999999999999999999999997665443
No 7
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.97 E-value=1.5e-28 Score=207.57 Aligned_cols=293 Identities=24% Similarity=0.395 Sum_probs=256.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCC---CcCCcchhhHHhH
Q 019514 7 TWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPL---ITVEPEDRWRRIF 83 (340)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~ 83 (340)
..+.+..++++..|++.++++++.+|+.-. +|++|++++..|+++-+++.....+..+++.. ....++.+.|+..
T Consensus 11 ~~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~--~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~a 88 (349)
T KOG1443|consen 11 LMNRVLTLALVLLYYFLSIGLTFYFKWLTK--NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLA 88 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhh
Confidence 345677788889999999999999999888 57789999999999988887776666554322 3456777888999
Q ss_pred HHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeecccccchHHHHHH
Q 019514 84 PMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCA 163 (340)
Q Consensus 84 ~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~~~~~~~G~~~ 163 (340)
|.++..++...+.|++++|++.+.+++.++..++|+.+++.++.-||+++.-..-++++.+|+.+....+.+++..|+.+
T Consensus 89 Ptalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~l 168 (349)
T KOG1443|consen 89 PTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFL 168 (349)
T ss_pred hhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccC---CCChHHHHHHHHHHHHHHHHHHHHHhcccchhhh---cccCCC--chHHHHHHHH
Q 019514 164 ALFGCLATSTKTILAESLLHSY---KFDSINTVYYMAPFATMILSIPALLLEGSGIMDW---LSTHPS--PWSAFIIIFS 235 (340)
Q Consensus 164 ~l~~~~~~a~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~l~~ 235 (340)
...++++.+++..+.++++++. +-+|...++...+...+.++|..+.+|++....+ ....+. .+.....+..
T Consensus 169 v~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l 248 (349)
T KOG1443|consen 169 VLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL 248 (349)
T ss_pred HHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH
Confidence 9999999999999999999763 3478899999999999999999999999754311 111122 3344566778
Q ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHH
Q 019514 236 SGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYG 301 (340)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~ 301 (340)
+|..+++.-.+-+.+..+++..+.++.+..+.+.+.+++..+.++++|..+|.|..++..|+..|.
T Consensus 249 ~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~ 314 (349)
T KOG1443|consen 249 GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR 314 (349)
T ss_pred HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence 888889888889999999999999999999999999999999999999999999999999999983
No 8
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.96 E-value=1.9e-27 Score=213.36 Aligned_cols=278 Identities=21% Similarity=0.341 Sum_probs=228.2
Q ss_pred HHHHHHHHhhhcCCC-CchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHHHHHHHHHHHhhhhhcccc
Q 019514 26 TVIITNKWIFQKLDF-KFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIP 104 (340)
Q Consensus 26 ~~~~~~k~~~~~~~~-~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~ 104 (340)
...+.++.+.+.... ++|+++++.|++.+.+.........+. +.+++.+++.+++.++++.++..+.+.+++|+|
T Consensus 14 ~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~ 89 (303)
T PF08449_consen 14 SYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKF----PKSRKIPLKKYAILSFLFFLASVLSNAALKYIS 89 (303)
T ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccc----cCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 344555666654333 479999999999999877765544341 123455788889999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeecccc----cc------hHHHHHHHHHHHHHHHHH
Q 019514 105 VSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL----SF------NMFGFCAALFGCLATSTK 174 (340)
Q Consensus 105 ~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~~----~~------~~~G~~~~l~~~~~~a~~ 174 (340)
.++.++++++.|+++++++.+++|||++++++.++++..+|+.+...++. +. +..|+++.+++.++.|.+
T Consensus 90 ~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~ 169 (303)
T PF08449_consen 90 YPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFT 169 (303)
T ss_pred hHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999876442 11 124999999999999999
Q ss_pred HHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 019514 175 TILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHST 254 (340)
Q Consensus 175 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 254 (340)
.+++|+..++++.++.+.++|.+.++.+..++.....+..+..+........+..+..++..++.+...+...+.++++.
T Consensus 170 ~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~ 249 (303)
T PF08449_consen 170 GVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKF 249 (303)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999998887777632111111111111233456777788888888888888899999
Q ss_pred chhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhhhhh
Q 019514 255 TAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLL 307 (340)
Q Consensus 255 ~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~~~~ 307 (340)
+|++.++...++.+.+++++++++|+++++.+|+|.++++.|..+|...++++
T Consensus 250 ~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 250 SALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred CchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 99999999999999999999999999999999999999999999999877654
No 9
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.96 E-value=2.3e-26 Score=205.65 Aligned_cols=271 Identities=14% Similarity=0.139 Sum_probs=200.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHHH
Q 019514 8 WSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSF 87 (340)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (340)
+.....+..+++|....... |...+ ++| |..+.++|+.++.+++.++. + +++ . ++++++..+..++
T Consensus 4 ~~~l~~l~a~~~Wg~~~~~~----k~~~~--~~~-P~~~~~~R~~~a~l~l~~~~---~-~~~--~-~~~~~~~~~~~~l 69 (295)
T PRK11689 4 KATLIGLIAILLWSTMVGLI----RGVSE--SLG-PVGGAAMIYSVSGLLLLLTV---G-FPR--L-RQFPKRYLLAGGL 69 (295)
T ss_pred chhHHHHHHHHHHHHHHHHH----HHHHc--cCC-hHHHHHHHHHHHHHHHHHHc---c-ccc--c-ccccHHHHHHHhH
Confidence 44556677788888766655 98888 577 99999999999988876642 1 111 1 2223444455455
Q ss_pred HHHHHHHHhhhhhcc----cchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeecccc---------
Q 019514 88 VFCINIVLGNVSLRY----IPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL--------- 154 (340)
Q Consensus 88 ~~~~~~~~~~~al~~----~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~~--------- 154 (340)
.+.....+.+.+++| .+++.++++.++.|+++.+++++++|||++++++.++.++++|+.+...++.
T Consensus 70 ~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~ 149 (295)
T PRK11689 70 LFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELIN 149 (295)
T ss_pred HHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhh
Confidence 556666666666654 5778889999999999999999999999999999999999999988765432
Q ss_pred --cchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHH
Q 019514 155 --SFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFII 232 (340)
Q Consensus 155 --~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (340)
+.+..|++++++++++||.|+++.|+..+ +.++.+... ..+.+.+.+.....+.+ . ...++..|..
T Consensus 150 ~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~--~~~~~~~~~---~~~~~~l~~~~~~~~~~-~------~~~~~~~~~~ 217 (295)
T PRK11689 150 NIASNPLSYGLAFIGAFIWAAYCNVTRKYAR--GKNGITLFF---ILTALALWIKYFLSPQP-A------MVFSLPAIIK 217 (295)
T ss_pred ccccChHHHHHHHHHHHHHHHHHHHHhhccC--CCCchhHHH---HHHHHHHHHHHHHhcCc-c------ccCCHHHHHH
Confidence 12356999999999999999999999876 456655432 22233333322222211 1 1122334555
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhh
Q 019514 233 IFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIR 304 (340)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~ 304 (340)
++..++.+...+...++.+++.++.+.+...+++|+++++++++++||++++.+++|+++++.|+.+....+
T Consensus 218 l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~ 289 (295)
T PRK11689 218 LLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT 289 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence 555666565666777899999999999999999999999999999999999999999999999988775433
No 10
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.96 E-value=5e-26 Score=203.26 Aligned_cols=272 Identities=13% Similarity=0.133 Sum_probs=207.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHHHHH-HH
Q 019514 13 SLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVF-CI 91 (340)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 91 (340)
.+...++|....+.. |...+ +.| |..++++|+..+.+++.++...+|++ . +++++++.....|.+. ..
T Consensus 13 ~~~~~~iWg~~~~~~----K~~~~--~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~---~-~~~~~~~~~~~~g~~~~~~ 81 (292)
T PRK11272 13 LFALYIIWGSTYLVI----RIGVE--SWP-PLMMAGVRFLIAGILLLAFLLLRGHP---L-PTLRQWLNAALIGLLLLAV 81 (292)
T ss_pred HHHHHHHHhhHHHHH----HHHhc--cCC-HHHHHHHHHHHHHHHHHHHHHHhCCC---C-CcHHHHHHHHHHHHHHHHH
Confidence 444555666655544 98887 577 99999999999998887765543322 1 2344666666667665 56
Q ss_pred HHHHhhhhh-cccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeecc-cccchHHHHHHHHHHHH
Q 019514 92 NIVLGNVSL-RYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT-ELSFNMFGFCAALFGCL 169 (340)
Q Consensus 92 ~~~~~~~al-~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~-~~~~~~~G~~~~l~~~~ 169 (340)
...+.+++. ++++++.++++.++.|+++++++.+ +|||++++++.++.++++|+.+...+ +.+.+..|+.+++++++
T Consensus 82 ~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~ 160 (292)
T PRK11272 82 GNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASA 160 (292)
T ss_pred HHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHH
Confidence 677888888 9999999999999999999999985 69999999999999999999887644 33455679999999999
Q ss_pred HHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHHHHH-HHHHHHH
Q 019514 170 ATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAF-CLNFSIF 248 (340)
Q Consensus 170 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~ 248 (340)
+||.+.+..|+..+ + ++.....++...+...+.+.....+... ....+...|..++..++.+. ..+...+
T Consensus 161 ~~a~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~i~~l~i~~s~~~~~l~~ 231 (292)
T PRK11272 161 SWAFGSVWSSRLPL--P-VGMMAGAAEMLAAGVVLLIASLLSGERL------TALPTLSGFLALGYLAVFGSIIAISAYM 231 (292)
T ss_pred HHHHHHHHHHhcCC--C-cchHHHHHHHHHHHHHHHHHHHHcCCcc------cccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999754 2 3455567777777777777655433210 00112233555555555543 4445667
Q ss_pred HHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhhh
Q 019514 249 YVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRH 305 (340)
Q Consensus 249 ~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~~ 305 (340)
+.+++.++.+.+...+++|+.+.+++++++||++|+.+++|+++++.|+.+.++.++
T Consensus 232 ~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~ 288 (292)
T PRK11272 232 YLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY 288 (292)
T ss_pred HHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 889999999999999999999999999999999999999999999999998766443
No 11
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.96 E-value=2.1e-26 Score=206.04 Aligned_cols=283 Identities=11% Similarity=0.078 Sum_probs=199.7
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCC--cCCcchhhHHhH
Q 019514 6 CTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLI--TVEPEDRWRRIF 83 (340)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~ 83 (340)
..++....+...++|...+... |.. . +.+ |..+.++|++++.+++.++...+++++.. +.+.++.+....
T Consensus 6 ~~~g~~~~l~a~~~wg~~~~~~----k~~-~--~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (296)
T PRK15430 6 TRQGVLLALAAYFIWGIAPAYF----KLI-Y--YVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLA 77 (296)
T ss_pred hhhHHHHHHHHHHHHHHHHHHH----HHh-c--CCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHH
Confidence 3445666667777777766555 764 4 466 99999999999988776655443321110 011122222233
Q ss_pred HHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeecccccchHHHHHH
Q 019514 84 PMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCA 163 (340)
Q Consensus 84 ~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~~~~~~~G~~~ 163 (340)
..++..+.++.++++|++++|++.++++..+.|+++.+++++++|||+++++|.+++++++|+.+...++.+.. .+
T Consensus 78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~~----~~ 153 (296)
T PRK15430 78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLP----II 153 (296)
T ss_pred HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCcc----HH
Confidence 44566678899999999999999999999999999999999999999999999999999999998764332222 46
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHHHHHHH
Q 019514 164 ALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCL 243 (340)
Q Consensus 164 ~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 243 (340)
+++++++||.|.++.|+..++...+......+..+.+.....+. .+. ....+ ...++..+..++..++.+...
T Consensus 154 ~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~---~~~~~~~~~~~~~~g~~t~i~ 226 (296)
T PRK15430 154 ALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADS-STSHM---GQNPMSLNLLLIAAGIVTTVP 226 (296)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccC-Ccccc---cCCcHHHHHHHHHHHHHHHHH
Confidence 88899999999999998754322222333334444443332211 111 11111 111222234444455556566
Q ss_pred HHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhhhhh
Q 019514 244 NFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLL 307 (340)
Q Consensus 244 ~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~~~~ 307 (340)
+...+..+++.+|.+.+...+++|+++.++|++++||++++.+++|+++++.|+.+........
T Consensus 227 ~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~~~ 290 (296)
T PRK15430 227 LLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYT 290 (296)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777889999999999999999999999999999999999999999999999888877655433
No 12
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.95 E-value=1.4e-25 Score=201.08 Aligned_cols=279 Identities=13% Similarity=0.203 Sum_probs=201.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHHH
Q 019514 8 WSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSF 87 (340)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (340)
++....+..+.+|....... |...+ +++ |..+.++|+.++.+.+..+.+ + + +.+++..+..++
T Consensus 4 ~~~l~~l~~~~~Wg~~~~~~----k~~~~--~~~-p~~~~~~R~~~a~~~l~~~~~--~--~------~~~~~~~~~~g~ 66 (299)
T PRK11453 4 KDGVLALLVVVVWGLNFVVI----KVGLH--NMP-PLMLAGLRFMLVAFPAIFFVA--R--P------KVPLNLLLGYGL 66 (299)
T ss_pred HHHHHHHHHHHHHhhhHHHH----HHHHh--cCC-HHHHHHHHHHHHHHHHHHHhc--C--C------CCchHHHHHHHH
Confidence 34456777788888877766 88777 577 999999999987765544321 1 1 111233444455
Q ss_pred HH-HHHHHHhhhhhcc-cchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeeccc---ccchHHHHH
Q 019514 88 VF-CINIVLGNVSLRY-IPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE---LSFNMFGFC 162 (340)
Q Consensus 88 ~~-~~~~~~~~~al~~-~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~---~~~~~~G~~ 162 (340)
+. .....+.+.+++| .|++.++++.++.|+++.+++++++|||++++++++++++++|+.+...++ .+.+..|+.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~ 146 (299)
T PRK11453 67 TISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFM 146 (299)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHH
Confidence 43 3444466778887 688999999999999999999999999999999999999999998876432 233457999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCC-CChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHHHHH
Q 019514 163 AALFGCLATSTKTILAESLLHSYK-FDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAF 241 (340)
Q Consensus 163 ~~l~~~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 241 (340)
++++++++|+.+.++.|+..++.+ .+......+....+.+.........+++.... ......++..|..++..++++.
T Consensus 147 l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~i~~t 225 (299)
T PRK11453 147 LTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMI-HSLVTIDMTTILSLMYLAFVAT 225 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhh-hhhccCCHHHHHHHHHHHHHHH
Confidence 999999999999999999765321 12233344444444443333333344322110 1111223445666777776666
Q ss_pred HHHH-HHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhh
Q 019514 242 CLNF-SIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIR 304 (340)
Q Consensus 242 ~~~~-~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~ 304 (340)
...+ ..++.+++.++.+.+....++|+.+.+++++++||++++.+++|.++++.|+.+..+.+
T Consensus 226 ~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~ 289 (299)
T PRK11453 226 IVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL 289 (299)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence 5544 55677899999999999999999999999999999999999999999999998776544
No 13
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.95 E-value=2.7e-25 Score=198.57 Aligned_cols=278 Identities=12% Similarity=0.056 Sum_probs=199.6
Q ss_pred CccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHH
Q 019514 2 EASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRR 81 (340)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 81 (340)
..+.++-++.+.....++-.+.........|+..+ ++| |..+.++|++++.+++.++.+..++ +.+ +++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~la~~~~~~~~~~~K~~~~--~~~-~~~~~~~R~~~a~l~l~~~~~~~~~----~~~-~~~~~~ 73 (293)
T PRK10532 2 PGSLRKLPVWLPILLLLIAMASIQSGASLAKSLFP--LVG-APGVTALRLALGTLILIAIFKPWRL----RFA-KEQRLP 73 (293)
T ss_pred CCcccccccchHHHHHHHHHHHHHhhHHHHHHHHH--HcC-HHHHHHHHHHHHHHHHHHHHhHHhc----cCC-HHHHHH
Confidence 33334444444444444444444444446799998 577 9999999999999887765432221 122 345666
Q ss_pred hHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeecc---cccchH
Q 019514 82 IFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT---ELSFNM 158 (340)
Q Consensus 82 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~---~~~~~~ 158 (340)
.+..+++.+..+.+.+++++++|++.+.++..+.|+++.+++. ||++.. .++.++++|+.+.... ..+.+.
T Consensus 74 ~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~~--~~~~i~~~Gv~li~~~~~~~~~~~~ 147 (293)
T PRK10532 74 LLFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVDF--VWVVLAVLGLWFLLPLGQDVSHVDL 147 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHHH--HHHHHHHHHHheeeecCCCcccCCh
Confidence 7777888888888899999999999999999999999988763 565544 4566778998776422 223456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHH
Q 019514 159 FGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGV 238 (340)
Q Consensus 159 ~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 238 (340)
.|++++++++++||.|.+..|+..+ +.++... .+...++.+.+.|.....+.. ...++..+..++..++
T Consensus 148 ~G~ll~l~aa~~~a~~~v~~r~~~~--~~~~~~~-~~~~~~~~~~l~~~~~~~~~~--------~~~~~~~~~~~l~lgv 216 (293)
T PRK10532 148 TGAALALGAGACWAIYILSGQRAGA--EHGPATV-AIGSLIAALIFVPIGALQAGE--------ALWHWSILPLGLAVAI 216 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc--cCCchHH-HHHHHHHHHHHHHHHHHccCc--------ccCCHHHHHHHHHHHH
Confidence 7999999999999999999999876 4466555 455566666666655543221 0112233433445555
Q ss_pred HHHHH-HHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhh
Q 019514 239 LAFCL-NFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIR 304 (340)
Q Consensus 239 ~~~~~-~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~ 304 (340)
++... +...++.+++.++.++++..+++|+++.++|++++||++++.+++|.++++.|++.+.+..
T Consensus 217 ~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~ 283 (293)
T PRK10532 217 LSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI 283 (293)
T ss_pred HHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence 54433 4456788999999999999999999999999999999999999999999999999987543
No 14
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.95 E-value=3.5e-25 Score=194.89 Aligned_cols=251 Identities=14% Similarity=0.096 Sum_probs=195.8
Q ss_pred HHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHH-HHHHHHHHHhhhhhcccchhH
Q 019514 29 ITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMS-FVFCINIVLGNVSLRYIPVSF 107 (340)
Q Consensus 29 ~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~al~~~~~~~ 107 (340)
...|+.+++ +.| |..+.+.|++.+.+.+.+..+. + .+++ ++++....+ +...+.+.+.+.|+++++++.
T Consensus 6 ~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~~-~------~~~~-~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~ 75 (260)
T TIGR00950 6 VVIGQYLEG-QVP-LYFAVFRRLIFALLLLLPLLRR-R------PPLK-RLLRLLLLGALQIGVFYVLYFVAVKRLPVGE 75 (260)
T ss_pred HHHHHHHhc-CCC-HHHHHHHHHHHHHHHHHHHHHh-c------cCHh-HHHHHHHHHHHHHHHHHHHHHHHHHhcChhh
Confidence 445888874 344 8899999999888877665432 2 1223 344444444 556888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeeccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 019514 108 MQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE-LSFNMFGFCAALFGCLATSTKTILAESLLHSYK 186 (340)
Q Consensus 108 ~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~-~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~ 186 (340)
++++.++.|+++++++.+++|||++++++.++.++++|+.+...++ .+.+..|+.++++++++|+.+.++.|+..++.+
T Consensus 76 ~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~ 155 (260)
T TIGR00950 76 AALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEG 155 (260)
T ss_pred hHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCC
Confidence 9999999999999999999999999999999999999998876443 455678999999999999999999999887443
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHHHH-HHHHHHHHHHHhccchhHHHHHhhh
Q 019514 187 FDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLA-FCLNFSIFYVIHSTTAVTFNVAGNL 265 (340)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~a~~~s~~~~~ 265 (340)
.++.....+....+.+++.|.....+.... . +...+..++..++++ ...+...++++++.++.+.+...++
T Consensus 156 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~ 227 (260)
T TIGR00950 156 PELLQFTGWVLLLGALLLLPFAWFLGPNPQ--A------LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALA 227 (260)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCCCCC--c------chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Confidence 334455556677777777777665432211 0 222344455555554 4455566788999999999999999
Q ss_pred hhHHHhhhhhhccCcccccchhhhhhHHhHhH
Q 019514 266 KVAVAVLVSWLIFRNPISGMNAVGCAITLIGC 297 (340)
Q Consensus 266 ~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~ 297 (340)
+|+++.+++++++||+++..+++|..+++.|+
T Consensus 228 ~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 228 EPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999885
No 15
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=1e-27 Score=199.23 Aligned_cols=304 Identities=17% Similarity=0.258 Sum_probs=259.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCCCchHHHHHHHHHHHHHHHHHHHHHhhcCC----CCcCCc-chhhHHh
Q 019514 10 VFRSLLAILQWWVFNVTVIITNKWIFQK--LDFKFPLSVSCIHFICSSIGAYLVIKVLKLKP----LITVEP-EDRWRRI 82 (340)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~----~~~~~~-~~~~~~~ 82 (340)
..+.-..+..+...++++.+.||++++. ...+.|.++++.|+++...+.+++-+..++.+ .++.+- -+..+..
T Consensus 26 ~~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~v 105 (347)
T KOG1442|consen 26 AKQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQV 105 (347)
T ss_pred hhchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhh
Confidence 3445567788999999999999999996 46778999999999999888777655543322 222221 2356778
Q ss_pred HHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeeccc---ccchHH
Q 019514 83 FPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE---LSFNMF 159 (340)
Q Consensus 83 ~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~---~~~~~~ 159 (340)
+|+++.+.++..+.++.++|++++.+++-++++.+|+.++++.++|+|-+.....+.++++.|..+.+..+ ...++.
T Consensus 106 lplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~ 185 (347)
T KOG1442|consen 106 LPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWI 185 (347)
T ss_pred cchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999998877 567899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHHH
Q 019514 160 GFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVL 239 (340)
Q Consensus 160 G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 239 (340)
|.++++.+.++-|+..+++|+.....+..-+.+.+|+++.+.++.+|...+.+..+-. +.....+.+.+|.++..+|++
T Consensus 186 GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v-~~~~~l~a~~Fw~~mtLsglf 264 (347)
T KOG1442|consen 186 GVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAV-VGFPHLPAIKFWILMTLSGLF 264 (347)
T ss_pred hhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHH-cCcccchHHHHHHHHHHHHHH
Confidence 9999999999999999999998876666778899999999999999988876543211 111233456788999999999
Q ss_pred HHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhhhhhhCCCCCC
Q 019514 240 AFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQPPPG 314 (340)
Q Consensus 240 ~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~~~~~~~~~~~ 314 (340)
+|..++.+.+-+|-++|.++.+-+..+.....++++.+++|.-+...|.|-++++.|...|++.+.+++++..++
T Consensus 265 gF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~~ 339 (347)
T KOG1442|consen 265 GFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASAQ 339 (347)
T ss_pred HHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhccC
Confidence 999999999999999999999999999999999999999999999999999999999999999888887765543
No 16
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.93 E-value=8.2e-25 Score=176.75 Aligned_cols=286 Identities=16% Similarity=0.311 Sum_probs=246.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHHHHHHHHHH
Q 019514 15 LAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIV 94 (340)
Q Consensus 15 ~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (340)
.....|..+++.+++.|||+++..+|+..+.+.+.|.+++.+.+... +..|.-+. +..+.+.++|.+++...+.+
T Consensus 9 ~~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iL-k~l~~~~f----R~t~aK~WfpiSfLLv~MIy 83 (309)
T COG5070 9 TASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLIL-KFLRLVEF----RLTKAKKWFPISFLLVVMIY 83 (309)
T ss_pred hHHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHH-HHHhHhhe----ehhhhhhhcCHHHHHHHHHH
Confidence 45567888999999999999999999999999999999998876663 44443322 13356778899999999999
Q ss_pred HhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeeccccc--------chHHHHHHHHH
Q 019514 95 LGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELS--------FNMFGFCAALF 166 (340)
Q Consensus 95 ~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~~~--------~~~~G~~~~l~ 166 (340)
....++||++++.+++.++++++.++.....++|.|.+..+..+.++.+..-+...++|.+ .+ .|++|+..
T Consensus 84 t~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~ 162 (309)
T COG5070 84 TSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFT 162 (309)
T ss_pred hcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEeh
Confidence 9999999999999999999999999999999999999999999999999888888777752 23 59999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHHHHHHHHHH
Q 019514 167 GCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFS 246 (340)
Q Consensus 167 ~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 246 (340)
.++..+.+....|+..+-.+......++|.++.+.++++.++..+|+++..+........ .+....++|+++++..++
T Consensus 163 NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d--~l~am~ISgl~svgiSy~ 240 (309)
T COG5070 163 NCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVD--SLMAMFISGLCSVGISYC 240 (309)
T ss_pred hhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChH--HHHHHHHHHHHHhhhhhc
Confidence 999999999999998887778889999999999999999999999987665432222222 356788999999999999
Q ss_pred HHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhhhhhh
Q 019514 247 IFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLS 308 (340)
Q Consensus 247 ~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~~~~~ 308 (340)
.-|+++.++.++.+.++.++.....+.|.++|||+.+...+..+.+-..+..+|...+.+++
T Consensus 241 saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~ 302 (309)
T COG5070 241 SAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQ 302 (309)
T ss_pred cceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998776543
No 17
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.91 E-value=1.3e-22 Score=169.51 Aligned_cols=291 Identities=15% Similarity=0.138 Sum_probs=224.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcC-----CCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCc-----------CCcch
Q 019514 14 LLAILQWWVFNVTVIITNKWIFQKL-----DFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLIT-----------VEPED 77 (340)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~k~~~~~~-----~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~-----------~~~~~ 77 (340)
+.+..+..++++..+++.||.=+.. +|++|...+...++.-+.++.++..++++...+. ..+.-
T Consensus 5 v~ls~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf 84 (372)
T KOG3912|consen 5 VFLSLIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPF 84 (372)
T ss_pred hhhhhhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCC
Confidence 3445566778888999999965522 5888988888888877777777655544322111 10011
Q ss_pred hhHHhHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeecccc---
Q 019514 78 RWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL--- 154 (340)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~~--- 154 (340)
.....++.++|..++..+.+.|+.+++++.+|+++....+|+.+++..+++++++.+||+++....+|++++...|.
T Consensus 85 ~p~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~ 164 (372)
T KOG3912|consen 85 NPVLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLV 164 (372)
T ss_pred CcceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccc
Confidence 23456778999999999999999999999999999999999999999999999999999999999999999765431
Q ss_pred -------cchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhccc-----------c-
Q 019514 155 -------SFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGS-----------G- 215 (340)
Q Consensus 155 -------~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~- 215 (340)
+.-..|+.+.+++-+.-|.+.++.+|..++++.+|.+...|...++.+.+..+....... +
T Consensus 165 ~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~ 244 (372)
T KOG3912|consen 165 TDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGV 244 (372)
T ss_pred cCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcc
Confidence 223579999999999999999999999999999999999999999977665555443111 0
Q ss_pred hhhhc---ccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhH
Q 019514 216 IMDWL---STHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAI 292 (340)
Q Consensus 216 ~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~l 292 (340)
..+|. ...+..+.....+....+...++|++.....|+.++++..++..++....++++..+..|.+...|+.|+++
T Consensus 245 ~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFli 324 (372)
T KOG3912|consen 245 LEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLI 324 (372)
T ss_pred hhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHH
Confidence 11111 111122222233333333344567777788999999999999999999999999999999999999999999
Q ss_pred HhHhHHHHHhhh
Q 019514 293 TLIGCTFYGYIR 304 (340)
Q Consensus 293 i~~g~~~~~~~~ 304 (340)
.+.|.++|+-.-
T Consensus 325 Li~Gi~lY~~il 336 (372)
T KOG3912|consen 325 LIMGIILYNQIL 336 (372)
T ss_pred HHHHHHHHHHHH
Confidence 999999998543
No 18
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.90 E-value=2e-22 Score=179.13 Aligned_cols=263 Identities=10% Similarity=0.028 Sum_probs=180.2
Q ss_pred HHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHHHHHHHHHHHhhhhhcccchh
Q 019514 27 VIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVS 106 (340)
Q Consensus 27 ~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~ 106 (340)
....+|...++ +.+ ..+.+.....+++.++...+..++..+.++++.+...+..++.......+.+.++++.|++
T Consensus 16 ~~~~~k~~~~~---~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 90 (281)
T TIGR03340 16 WNLMAKSHADK---EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADVG 90 (281)
T ss_pred HHHHHhhcCCc---hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCChh
Confidence 44455766553 223 3466666666666555443221222222234455556666667788888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeeccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 019514 107 FMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE-LSFNMFGFCAALFGCLATSTKTILAESLLHSY 185 (340)
Q Consensus 107 ~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~-~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~ 185 (340)
.++.+.++.|+++.+++++++|||+++++|.|+.++++|+.+...++ .+.+..|+.++++++++|+.|.+..|+..+
T Consensus 91 ~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~-- 168 (281)
T TIGR03340 91 LVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAAL-- 168 (281)
T ss_pred hhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhcccccc--
Confidence 99999999999999999999999999999999999999998876433 234456888999999999999999887644
Q ss_pred CCChHHHHHHHHHHHHHHH-HHHHHHhcccchhhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhh
Q 019514 186 KFDSINTVYYMAPFATMIL-SIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 264 (340)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~ 264 (340)
+.++..........+.+.. .|........+...+ .......+..+...++.+...+...++.+++.++.+.+...+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~ 245 (281)
T TIGR03340 169 GVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSM---FPYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRN 245 (281)
T ss_pred chhcccccHHHHHHHHHHHHHHHHHHHHHHhccch---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecc
Confidence 2232211111111122211 222221110000000 011112234455555556566667788899999999999999
Q ss_pred hhhHHHhhhhhhccCcccccchhhhhhHHhHhHHH
Q 019514 265 LKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTF 299 (340)
Q Consensus 265 ~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~ 299 (340)
++|+++.++|++++||++++.+++|+++++.|+.+
T Consensus 246 l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 246 TSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred cHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 99999999999999999999999999999999875
No 19
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.89 E-value=1.4e-20 Score=165.07 Aligned_cols=248 Identities=10% Similarity=0.060 Sum_probs=172.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCC----C-CcCCcchhhHHhH
Q 019514 9 SVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKP----L-ITVEPEDRWRRIF 83 (340)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~----~-~~~~~~~~~~~~~ 83 (340)
+....+..+++|...+... |. .. +.| |..+.++|++++.+++.++...+++++ . ++.++++.+....
T Consensus 3 g~~~~i~a~~~wg~~~~~~----k~-~~--~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (256)
T TIGR00688 3 GIIVSLLASFLFGYMYYYS----KL-LK--PLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLL 74 (256)
T ss_pred cHHHHHHHHHHHHHHHHHH----HH-hc--cCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHH
Confidence 4566777778888877766 87 44 466 999999999999887766543333211 1 1111222234456
Q ss_pred HHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeecccccchHHHHHH
Q 019514 84 PMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCA 163 (340)
Q Consensus 84 ~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~~~~~~~G~~~ 163 (340)
..+++.+.+..++++++++++++.++++.++.|+++++++++++|||++++++.+++++++|+.+...++.+.+ .+
T Consensus 75 ~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~ 150 (256)
T TIGR00688 75 LCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WE 150 (256)
T ss_pred HHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HH
Confidence 66777888999999999999999999999999999999999999999999999999999999987754433222 35
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHHHHHHH
Q 019514 164 ALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCL 243 (340)
Q Consensus 164 ~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 243 (340)
+++++++||.|.+..|+..++ +..+.... .........+.....+.... ........|..++..++.+...
T Consensus 151 ~l~aa~~~a~~~i~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~g~~t~i~ 221 (256)
T TIGR00688 151 ALVLAFSFTAYGLIRKALKNT---DLAGFCLE-TLSLMPVAIYYLLQTDFATV-----QQTNPFPIWLLLVLAGLITGTP 221 (256)
T ss_pred HHHHHHHHHHHHHHHhhcCCC---CcchHHHH-HHHHHHHHHHHHHHhccCcc-----cccCchhHHHHHHHHHHHHHHH
Confidence 788999999999999987542 22222211 11122222211111111100 0011112355556666666666
Q ss_pred HHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhc
Q 019514 244 NFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLI 277 (340)
Q Consensus 244 ~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~ 277 (340)
+......+++.++.+.+...+++|+.+.+++++.
T Consensus 222 ~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 222 LLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 7777899999999999999999999999998764
No 20
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.87 E-value=1.4e-19 Score=153.63 Aligned_cols=262 Identities=16% Similarity=0.169 Sum_probs=218.7
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHH
Q 019514 39 DFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPAT 118 (340)
Q Consensus 39 ~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~ 118 (340)
+|++|.++.+.|-+++.++....+.+++.. ...+.++......++.......+++.|++|++-++..+-+++.-+-
T Consensus 47 rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~----~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIP 122 (327)
T KOG1581|consen 47 RFEHSLFLVFCQRLVALLVSYAMLKWWKKE----LSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIP 122 (327)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhccccc----CCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhH
Confidence 588899999999999999887766554433 2345567777788999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccchhhhhhhhhhhhhceeeeccc--------c-cchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCh
Q 019514 119 TVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE--------L-SFNMFGFCAALFGCLATSTKTILAESLLHSYKFDS 189 (340)
Q Consensus 119 ~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~--------~-~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~ 189 (340)
+++...++.++|++..+++...++.+|+.+....+ . +.++.|+.+...+-++.++.+..++++.++.++++
T Consensus 123 Vmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~ 202 (327)
T KOG1581|consen 123 VMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSS 202 (327)
T ss_pred HHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccH
Confidence 99999999999999999999999999998865431 1 34589999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhhhhHH
Q 019514 190 INTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAV 269 (340)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~ 269 (340)
+.++++.++++++.-+...+ +.....+.......++..+.=++..+.++...+...+.-+++.++.+..+++..+.++
T Consensus 203 ~~mM~~vNLf~~i~~~~~li--~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~ 280 (327)
T KOG1581|consen 203 LHMMFGVNLFSAILNGTYLI--LQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMV 280 (327)
T ss_pred hHHHHHHHHHHHHHHHHhhh--cCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHH
Confidence 99999999998887665422 2222222233333444556777777788888888888889999999999999999999
Q ss_pred HhhhhhhccCcccccchhhhhhHHhHhHHHHHhhhhh
Q 019514 270 AVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHL 306 (340)
Q Consensus 270 ~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~~~ 306 (340)
++.++.+.+|++.++.|+.|..+++.|+.+-...+.+
T Consensus 281 si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 281 SIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred HHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 9999999999999999999999999988875554444
No 21
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.87 E-value=8.7e-19 Score=156.42 Aligned_cols=261 Identities=17% Similarity=0.223 Sum_probs=188.3
Q ss_pred HHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHHHHHHHHHHHhhhhhcccchh
Q 019514 27 VIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVS 106 (340)
Q Consensus 27 ~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~ 106 (340)
.....|...++ ...+....+.|...+.+......+ +++....+ ..+..+...+..++.......+++.++++++++
T Consensus 22 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (292)
T COG0697 22 SFIALKLAVES--LDPFLFAAALRFLIAALLLLPLLL-LEPRGLRP-ALRPWLLLLLLALLGLALPFLLLFLALKYTSAS 97 (292)
T ss_pred HHHHHHHHhcc--cCChHHHHHHHHHHHHHHHHHHHH-hhcccccc-cccchHHHHHHHHHHHHHHHHHHHHHHhhcchH
Confidence 33344666653 232556666699888877333222 11111111 112133455555666788889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-HHhhcccchhhhhhhhhhhhhceeeecccccch---HHHHHHHHHHHHHHHHHHHHHHHHh
Q 019514 107 FMQTIKSFTPATTVVLQW-LVWRKYFDWRIWASLVPIVGGILLTSVTELSFN---MFGFCAALFGCLATSTKTILAESLL 182 (340)
Q Consensus 107 ~~~~l~~~~pi~~~~l~~-~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~~~~~---~~G~~~~l~~~~~~a~~~v~~~~~~ 182 (340)
.++.+.++.|+++.++++ +++|||++++++.++.+++.|+.+....+...+ ..|+.+++.+++++|.+.+..|+..
T Consensus 98 ~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~ 177 (292)
T COG0697 98 VASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS 177 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999997 677999999999999999999999988765443 5899999999999999999999987
Q ss_pred ccCCCChHHHHH-HHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHHHHHH-HHHHHHHHHhccchhHHH
Q 019514 183 HSYKFDSINTVY-YMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFC-LNFSIFYVIHSTTAVTFN 260 (340)
Q Consensus 183 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~a~~~s 260 (340)
+.++..... +... ..............+ .+.....+..+...++.+.. .+...++.+++.++...+
T Consensus 178 ---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~ 245 (292)
T COG0697 178 ---RLGPVTLALLLQLL--LALLLLLLFFLSGFG-------APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVA 245 (292)
T ss_pred ---CCChHHHHHHHHHH--HHHHHHHHHHhcccc-------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHH
Confidence 335555555 3332 111221111111111 12222335566666666654 566677889999999999
Q ss_pred HHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhh
Q 019514 261 VAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYI 303 (340)
Q Consensus 261 ~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~ 303 (340)
....++|+.+.+++++++||+++..+++|..+++.|+.+....
T Consensus 246 ~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 246 LLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999987765
No 22
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.86 E-value=2.9e-19 Score=147.73 Aligned_cols=253 Identities=15% Similarity=0.120 Sum_probs=200.3
Q ss_pred HHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHHHHHHHHHHHhhhhhcccchhH
Q 019514 28 IITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSF 107 (340)
Q Consensus 28 ~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~ 107 (340)
.-..|.++. .+. |.-.+++|..++.+++.+++|-++++ ..+++++..+..|+..+.+|.++|.+++.+|.++
T Consensus 28 as~Ak~LFP--~vG-~~g~t~lRl~~aaLIll~l~RPwr~r-----~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGi 99 (292)
T COG5006 28 ASFAKSLFP--LVG-AAGVTALRLAIAALILLALFRPWRRR-----LSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGI 99 (292)
T ss_pred HHHHHHHcc--ccC-hhhHHHHHHHHHHHHHHHHhhHHHhc-----cChhhhHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 345688888 344 88999999999999999888776643 2456889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeecc---cccchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 019514 108 MQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT---ELSFNMFGFCAALFGCLATSTKTILAESLLHS 184 (340)
Q Consensus 108 ~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~---~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~ 184 (340)
+..+..+.|+.++.++ .||.+-.-|+ .+.+.|..+..-. ..+.|..|..+++.++.||+.|.+..||..+
T Consensus 100 AVAiEF~GPL~vA~~~----sRr~~d~vwv--aLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~- 172 (292)
T COG5006 100 AVAIEFTGPLAVALLS----SRRLRDFVWV--ALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGR- 172 (292)
T ss_pred hhhhhhccHHHHHHHh----ccchhhHHHH--HHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcc-
Confidence 9999999999886644 4666555555 4555666554432 2567899999999999999999999999886
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHHHHHHHHHH-HHHHHhccchhHHHHHh
Q 019514 185 YKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFS-IFYVIHSTTAVTFNVAG 263 (340)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~a~~~s~~~ 263 (340)
..+..+.+...+..+.++.+|+.....++...+ +..+...+..++++...-|+ -...+++.++.+.+++.
T Consensus 173 -~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~--------p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~Ll 243 (292)
T COG5006 173 -AEHGTAGVAVGMLVAALIVLPIGAAQAGPALFS--------PSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLL 243 (292)
T ss_pred -cCCCchHHHHHHHHHHHHHhhhhhhhcchhhcC--------hHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHH
Confidence 457777888888999999999887655443332 23344555555555554443 36679999999999999
Q ss_pred hhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhh
Q 019514 264 NLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIR 304 (340)
Q Consensus 264 ~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~ 304 (340)
.++|.++.+.|++++||.+|+.||.|++.++.+..-.....
T Consensus 244 SLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~ 284 (292)
T COG5006 244 SLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTA 284 (292)
T ss_pred HhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccccc
Confidence 99999999999999999999999999999999877555433
No 23
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.86 E-value=1.4e-18 Score=151.73 Aligned_cols=288 Identities=13% Similarity=0.193 Sum_probs=211.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCc-hHHHHHHHHHHHHHHHHHH-HHHh-h--cCCCCcCCc-----chhhHHhHHH
Q 019514 16 AILQWWVFNVTVIITNKWIFQKLDFKF-PLSVSCIHFICSSIGAYLV-IKVL-K--LKPLITVEP-----EDRWRRIFPM 85 (340)
Q Consensus 16 ~~~~~~~~~~~~~~~~k~~~~~~~~~~-p~~~~~~r~~~~~~~l~~~-~~~~-~--~~~~~~~~~-----~~~~~~~~~~ 85 (340)
..+...+-..+..+..+|.-++.+.++ |....+.-=++-.+++... ++-. + ++..+.+.+ +....+....
T Consensus 19 ~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vP 98 (345)
T KOG2234|consen 19 SLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVP 98 (345)
T ss_pred HHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHH
Confidence 334444555666677777776543332 4444443322222222222 1111 1 111111111 1123445555
Q ss_pred HHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeeccc-----------c
Q 019514 86 SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE-----------L 154 (340)
Q Consensus 86 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~-----------~ 154 (340)
+++|.+.+.+.+.++.+.|++++++..++.++.++++..++++||+++.||.++++..+|+.+...+. .
T Consensus 99 a~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~ 178 (345)
T KOG2234|consen 99 ALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSA 178 (345)
T ss_pred HHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcc
Confidence 88999999999999999999999999999999999999999999999999999999999999976211 2
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHH
Q 019514 155 SFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIF 234 (340)
Q Consensus 155 ~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 234 (340)
+..+.|....+.++++.++.+++.|+++|+.+.+.+-.......++.++.+......|+..........++++..|..++
T Consensus 179 ~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~vVl 258 (345)
T KOG2234|consen 179 QNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLVVL 258 (345)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHHHHH
Confidence 33578999999999999999999999999888777777777777777777766666666544422344566777788888
Q ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhhhhh
Q 019514 235 SSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLL 307 (340)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~~~~ 307 (340)
..++-+..... .+|+.+...-+....+..+++.+.++.++|.++|....+|..+++.++.+|...+.+.
T Consensus 259 ~~a~gGLlvs~----v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~ 327 (345)
T KOG2234|consen 259 LNAVGGLLVSL----VMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD 327 (345)
T ss_pred HHhccchhHHH----HHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 77777766544 4699999999999999999999999999999999999999999999999999555443
No 24
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.84 E-value=1.6e-20 Score=153.22 Aligned_cols=257 Identities=18% Similarity=0.254 Sum_probs=210.1
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHH
Q 019514 39 DFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPAT 118 (340)
Q Consensus 39 ~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~ 118 (340)
.|.+...+.+.|+....+..-+++.++++. +.. +..-+....+++.|.+.....|.++||+|-++..+-+++.|+-
T Consensus 49 ~FTfalaLVf~qC~~N~vfAkvl~~ir~~~---~~D-~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIP 124 (337)
T KOG1580|consen 49 KFTFALALVFFQCTANTVFAKVLFLIRKKT---EID-NTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIP 124 (337)
T ss_pred eehHHHHHHHHHHHHHHHHHHhheeecccc---ccc-CCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcc
Confidence 366789999999999998877765554322 222 2234556778999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccchhhhhhhhhhhhhceeeecccc-------cchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHH
Q 019514 119 TVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL-------SFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSIN 191 (340)
Q Consensus 119 ~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~~-------~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~ 191 (340)
+++++.++.+++++++++.+++.+++|+++.-..+. +.-.+|-++.+++--..++....++++.+.+..+...
T Consensus 125 VMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~ 204 (337)
T KOG1580|consen 125 VMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTS 204 (337)
T ss_pred eeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchh
Confidence 999999999999999999999999999999765431 2224688999999999999999999998877778888
Q ss_pred HHHHHHHHHHHHHHHHHHHh-cccchhhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhhhhHHH
Q 019514 192 TVYYMAPFATMILSIPALLL-EGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVA 270 (340)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~ 270 (340)
++++.++.+.+.+....++. |-+++..+... .+..|+-+...++.+.+.+...+..+...+|.+-|++...+..++
T Consensus 205 MM~~~NlwStL~Lg~g~lfTGElweF~yF~~R---hP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFT 281 (337)
T KOG1580|consen 205 MMFYTNLWSTLYLGAGLLFTGELWEFFYFVQR---HPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFT 281 (337)
T ss_pred hHHHHHHHHHHHhhhhheehhhHHHHHHHHHh---ccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHH
Confidence 99999999988776554443 22333333333 334466677777888788888888999999999999999999999
Q ss_pred hhhhhhccCcccccchhhhhhHHhHhHHHHHh
Q 019514 271 VLVSWLIFRNPISGMNAVGCAITLIGCTFYGY 302 (340)
Q Consensus 271 ~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~ 302 (340)
++.++++|+++++.+||+|.++++.|...-..
T Consensus 282 il~SVllf~npls~rQwlgtvlVF~aL~~D~~ 313 (337)
T KOG1580|consen 282 ILISVLLFNNPLSGRQWLGTVLVFSALTADVV 313 (337)
T ss_pred HHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence 99999999999999999999999998776443
No 25
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.84 E-value=2.1e-19 Score=154.78 Aligned_cols=212 Identities=19% Similarity=0.290 Sum_probs=171.6
Q ss_pred hhHHhHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeecccc---
Q 019514 78 RWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL--- 154 (340)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~~--- 154 (340)
+..+....+++|...+.+.+.++++++++++|+++++.++++++++++++|||++++||.++.+.++|+.+...++.
T Consensus 16 ~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~ 95 (244)
T PF04142_consen 16 DTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSS 95 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcccc
Confidence 34444555899999999999999999999999999999999999999999999999999999999999999754321
Q ss_pred --------------cchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhc
Q 019514 155 --------------SFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWL 220 (340)
Q Consensus 155 --------------~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (340)
+....|+.+.++++++.++..++.||.+|+.+.+.+.........+.++.++.....+..+..+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g 175 (244)
T PF04142_consen 96 DNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESG 175 (244)
T ss_pred ccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCC
Confidence 123589999999999999999999999998777777777777777777777665555443333322
Q ss_pred ccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHH
Q 019514 221 STHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAIT 293 (340)
Q Consensus 221 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li 293 (340)
...++++..|..++..++.+.... ..+|+.+...-+....+..+++.+.++++||.++|....+|..++
T Consensus 176 ~f~G~~~~~~~~i~~~a~gGllva----~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 176 FFHGYSWWVWIVIFLQAIGGLLVA----FVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred chhhcchHHHHHHHHHHHhhHHHH----HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 333445555666665555555443 447999999999999999999999999999999999999998753
No 26
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.84 E-value=9.4e-18 Score=142.56 Aligned_cols=286 Identities=15% Similarity=0.129 Sum_probs=213.4
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCC-c-CCcchhhHHh
Q 019514 5 LCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLI-T-VEPEDRWRRI 82 (340)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~-~-~~~~~~~~~~ 82 (340)
..+++....+..-.+|+..-... |.+-. .| +..+...|.+.+..++.+.....|+.+.. + .+..+.+..+
T Consensus 4 ~~~~Gil~~l~Ay~lwG~lp~y~----kll~~---~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~ 75 (293)
T COG2962 4 DSRKGILLALLAYLLWGLLPLYF----KLLEP---LP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLML 75 (293)
T ss_pred cccchhHHHHHHHHHHHHHHHHH----HHHcc---CC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHH
Confidence 34566777777778888766655 66553 56 88999999999888877766555543321 1 1111234445
Q ss_pred HHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeecccccchHHHHH
Q 019514 83 FPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFC 162 (340)
Q Consensus 83 ~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~~~~~~~G~~ 162 (340)
...++.-+.+...+.++.+.-.+=.++.=....|++..+++.+++|||+++.||++++++.+||..-.+...+.++.
T Consensus 76 ~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwv--- 152 (293)
T COG2962 76 ALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWV--- 152 (293)
T ss_pred HHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHH---
Confidence 55566667777788888888777778888899999999999999999999999999999999999988888888876
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHHHHHH
Q 019514 163 AALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFC 242 (340)
Q Consensus 163 ~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (340)
++.-+++|+.|...-|+. +.|+.+-.......-.+..+......+..+. ....++...+.+++.+|..+..
T Consensus 153 -al~la~sf~~Ygl~RK~~----~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~----~~~~~~~~~~~LLv~aG~vTav 223 (293)
T COG2962 153 -ALALALSFGLYGLLRKKL----KVDALTGLTLETLLLLPVALIYLLFLADSGQ----FLQQNANSLWLLLVLAGLVTAV 223 (293)
T ss_pred -HHHHHHHHHHHHHHHHhc----CCchHHhHHHHHHHHhHHHHHHHHHHhcCch----hhhcCCchHHHHHHHhhHHHHH
Confidence 455578899999887775 4577666655554444433333333333221 1111234457788888888776
Q ss_pred HHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhhhhhhCC
Q 019514 243 LNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQ 310 (340)
Q Consensus 243 ~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~~~~~~~ 310 (340)
--......-++.+-.+.++..+.+|.+..+++++++||+++..+.+..+++..|..+|.....++.+|
T Consensus 224 pL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~r~ 291 (293)
T COG2962 224 PLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTARK 291 (293)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 65555667899999999999999999999999999999999999999999999999999877655443
No 27
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.82 E-value=9.6e-19 Score=152.43 Aligned_cols=224 Identities=14% Similarity=0.194 Sum_probs=180.2
Q ss_pred HHhHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeeccc------
Q 019514 80 RRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE------ 153 (340)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~------ 153 (340)
+..+....+....++.++.|+.+++++...++.+++-+|+..++.++..||++..+.+++.+.++|+++++.++
T Consensus 160 k~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~ 239 (416)
T KOG2765|consen 160 KLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSD 239 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccccc
Confidence 33444456667888999999999999999999999999999999999999999999999999999999998763
Q ss_pred --ccchHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHH
Q 019514 154 --LSFNMFGFCAALFGCLATSTKTILAESLLHSY--KFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSA 229 (340)
Q Consensus 154 --~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (340)
.+....|.++++.++++||.|.++.|+-..++ +.|......+..++..+++.|...+.+......+ ..++..+.
T Consensus 240 ~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F--~lP~~~q~ 317 (416)
T KOG2765|consen 240 LPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERF--ELPSSTQF 317 (416)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcc--cCCCCcee
Confidence 33457899999999999999999999988765 5666667778888888888777776544322211 11222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhhh
Q 019514 230 FIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRH 305 (340)
Q Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~~ 305 (340)
-.++..+++..++.-+...+.+-.++|+.+.+...+..+++.+.+.++-|.++|+.+++|.+.+++|.+..+...+
T Consensus 318 ~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 318 SLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred EeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence 2344444455555567777888999999999999999999999999999999999999999999999999886543
No 28
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.82 E-value=1.3e-17 Score=148.40 Aligned_cols=264 Identities=16% Similarity=0.186 Sum_probs=193.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHHHHHH
Q 019514 11 FRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFC 90 (340)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (340)
...+..+.+|.+.+... |+.. +++.++.. |..++.+++..+....+. +. .+.++.+...+..|+..+
T Consensus 4 l~~lia~~~wGs~g~~~----k~~~---g~~~~~~~---~~~~g~l~~~~~~~~~~~-~~--~~~~~~~~~g~l~G~~w~ 70 (290)
T TIGR00776 4 LIALIPALFWGSFVLIN----VKIG---GGPYSQTL---GTTFGALILSIAIAIFVL-PE--FWALSIFLVGLLSGAFWA 70 (290)
T ss_pred HHHHHHHHHHhhhHHHH----hccC---CCHHHHHH---HHHHHHHHHHHHHHHHhC-Cc--ccccHHHHHHHHHHHHHH
Confidence 44566788888877766 6654 45534332 677777766655444442 21 122335555666677789
Q ss_pred HHHHHhhhhhcccchhHHHHHHH-HHHHHHHHHHHHHhhcccchhh----hhhhhhhhhhceeeeccccc-------ch-
Q 019514 91 INIVLGNVSLRYIPVSFMQTIKS-FTPATTVVLQWLVWRKYFDWRI----WASLVPIVGGILLTSVTELS-------FN- 157 (340)
Q Consensus 91 ~~~~~~~~al~~~~~~~~~~l~~-~~pi~~~~l~~~~l~e~~~~~~----~~~i~l~~~Gv~i~~~~~~~-------~~- 157 (340)
.++.+++.+.++++++.+..+.+ +.+++..+.+.+++||+.++++ +.|+++.++|+.+....+.+ .+
T Consensus 71 ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~ 150 (290)
T TIGR00776 71 LGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNF 150 (290)
T ss_pred hhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccch
Confidence 99999999999999999988887 8899999999999999999999 99999999999997653211 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHH---HHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHH
Q 019514 158 MFGFCAALFGCLATSTKTILAESLLHSYKFDSINT---VYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIF 234 (340)
Q Consensus 158 ~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 234 (340)
..|+.++++++++|+.|.+..|+. +.+|.+. +.+....+..+..+... +. .++ .+...+..+
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~---~~~-----~~~~~~~~~- 215 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKAF----GVDGLSVLLPQAIGMVIGGIIFNLGHI--LA---KPL-----KKYAILLNI- 215 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc----CCCcceehhHHHHHHHHHHHHHHHHHh--cc---cch-----HHHHHHHHH-
Confidence 679999999999999999999975 3577777 34434444443333220 00 001 111223333
Q ss_pred HHHHHHHHHHHHHHHHHh-ccchhHHHHHhhhhhHHHhhhhhhccCcccccchh----hhhhHHhHhHHHHHh
Q 019514 235 SSGVLAFCLNFSIFYVIH-STTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNA----VGCAITLIGCTFYGY 302 (340)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~-~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~----~G~~li~~g~~~~~~ 302 (340)
..|++....+..++...+ +.++.+.+++...+|+.+.+++++++||..+..++ +|+++++.|+.+...
T Consensus 216 ~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 216 LPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence 377776555556667778 99999999999999999999999999999999999 999999999987643
No 29
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.79 E-value=2.1e-18 Score=143.81 Aligned_cols=292 Identities=15% Similarity=0.204 Sum_probs=233.6
Q ss_pred chhhHHHHHHHH-HHHHHHHHHHHHHHHhhhcCCCC-chHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHH
Q 019514 7 TWSVFRSLLAIL-QWWVFNVTVIITNKWIFQKLDFK-FPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFP 84 (340)
Q Consensus 7 ~~~~~~~~~~~~-~~~~~~~~~~~~~k~~~~~~~~~-~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (340)
+.++|...+.+. -..+..+....+.+++++..+|. +.|.++..|+++-..+.+.-... ..++ ++..+||....
T Consensus 37 ~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~--~~~k---~r~iP~rtY~~ 111 (367)
T KOG1582|consen 37 DKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQL--IQTK---RRVIPWRTYVI 111 (367)
T ss_pred cCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEe--eccc---ceecchhHhhh
Confidence 445555544433 34445566678889999988887 89999999998775443332211 1221 24557888888
Q ss_pred HHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeeccc----ccchHHH
Q 019514 85 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE----LSFNMFG 160 (340)
Q Consensus 85 ~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~----~~~~~~G 160 (340)
++.+..+...+.+-++.|+.-++..+.+++..+-+++.+.++-++|+....+.+..+...|.++....| ++++..|
T Consensus 112 la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~G 191 (367)
T KOG1582|consen 112 LAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIG 191 (367)
T ss_pred hHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceee
Confidence 899889999999999999999999999999999999999999999999999999999999999877654 6788899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHHHH
Q 019514 161 FCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLA 240 (340)
Q Consensus 161 ~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (340)
++..-.+-++.|.-...+++.++..+-+..++++|...++.+.++......+. -...|.....+++......++-...+
T Consensus 192 v~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge-~f~a~~fcaehp~~tyGy~~~~s~~g 270 (367)
T KOG1582|consen 192 VMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGE-LFSAWTFCAEHPVRTYGYAFLFSLAG 270 (367)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhccc-chhhhHHHHhCcHhHHHHHHHHHHHh
Confidence 99999999999999999999999877788889999999999888766555433 22344444555654566666666666
Q ss_pred HHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhh
Q 019514 241 FCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIR 304 (340)
Q Consensus 241 ~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~ 304 (340)
++...+....++..+|..+..+...+...++++|+++|..++|.+..-|..+++.|+++-...+
T Consensus 271 ylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 271 YLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 6666666677999999999999999999999999999999999999999999999998755544
No 30
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.79 E-value=2.8e-20 Score=154.65 Aligned_cols=277 Identities=15% Similarity=0.218 Sum_probs=208.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHHHHH
Q 019514 10 VFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVF 89 (340)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (340)
+..+++..+- +.+++.+.+..|-+.. + |..+...|+++-.+...++..+++. +. ..++..++..++.++..
T Consensus 37 ~~gl~l~~vs-~ff~~~~vv~t~~~e~----~-p~e~a~~r~l~~mlit~pcliy~~~-~v--~gp~g~R~~LiLRg~mG 107 (346)
T KOG4510|consen 37 NLGLLLLTVS-YFFNSCMVVSTKVLEN----D-PMELASFRLLVRMLITYPCLIYYMQ-PV--IGPEGKRKWLILRGFMG 107 (346)
T ss_pred ccCceehhhH-HHHhhHHHhhhhhhcc----C-hhHhhhhhhhhehhhhheEEEEEee-ee--ecCCCcEEEEEeehhhh
Confidence 4444555555 5555556555555443 3 8888888877666655554433332 21 12233444455667888
Q ss_pred HHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeeccc--------------cc
Q 019514 90 CINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE--------------LS 155 (340)
Q Consensus 90 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~--------------~~ 155 (340)
..+....+++++|++.+.+.++...+|+++.+++|.++||++++.+.++..+.+.|++++..+. .+
T Consensus 108 ~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~ 187 (346)
T KOG4510|consen 108 FTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVE 187 (346)
T ss_pred hhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcccccccccc
Confidence 8888899999999999999999999999999999999999999999999999999999986532 12
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHH
Q 019514 156 FNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFS 235 (340)
Q Consensus 156 ~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 235 (340)
-+..|-..++.+++.-|-..++.|++.| +.|..-.+.|..+++.+..++.....+.. + ..+.+.. |++++.
T Consensus 188 ~~~~gt~aai~s~lf~asvyIilR~iGk--~~h~~msvsyf~~i~lV~s~I~~~~ig~~---~-lP~cgkd---r~l~~~ 258 (346)
T KOG4510|consen 188 YDIPGTVAAISSVLFGASVYIILRYIGK--NAHAIMSVSYFSLITLVVSLIGCASIGAV---Q-LPHCGKD---RWLFVN 258 (346)
T ss_pred ccCCchHHHHHhHhhhhhHHHHHHHhhc--cccEEEEehHHHHHHHHHHHHHHhhccce---e-cCccccc---eEEEEE
Confidence 2346788889999999999999999888 66777677777777777665554433321 1 2222223 567778
Q ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhh
Q 019514 236 SGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIR 304 (340)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~ 304 (340)
.|+.+++.+......+++--|...++..+...+++.++.+++|||.||++.++|+++++.+.++....+
T Consensus 259 lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k 327 (346)
T KOG4510|consen 259 LGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK 327 (346)
T ss_pred ehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence 889999988887788888888889999999999999999999999999999999999988877765444
No 31
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.75 E-value=1.1e-18 Score=144.34 Aligned_cols=279 Identities=13% Similarity=0.176 Sum_probs=215.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHH
Q 019514 7 TWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMS 86 (340)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (340)
.++.+..+.+.-.......+..+.+.++.++ +.|.|...+++.+..-+++-.++..+++ +. -+..|+..+.++
T Consensus 13 tkk~li~~~LGQiLSL~~t~~a~tss~la~k-~iN~Pt~QtFl~Y~LLalVY~~~~~fR~--~~----~~~~~~hYilla 85 (336)
T KOG2766|consen 13 TKKTLIGLGLGQILSLLITSTAFTSSELARK-GINAPTSQTFLNYVLLALVYGPIMLFRR--KY----IKAKWRHYILLA 85 (336)
T ss_pred chhhhheeeHHHHHHHHHHcchhhhHHHHhc-cCCCccHHHHHHHHHHHHHHhhHHHhhh--HH----HHHHHHHhhhee
Confidence 3445555556666666666677888888876 6889999999999888877777665544 11 234567788889
Q ss_pred HHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeeccc--------ccchH
Q 019514 87 FVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE--------LSFNM 158 (340)
Q Consensus 87 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~--------~~~~~ 158 (340)
+...-++++...|.||++....+.+.+-..+-+.+++|+++|.|++..++.|++++++|+++....| ++...
T Consensus 86 ~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~ 165 (336)
T KOG2766|consen 86 FVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPV 165 (336)
T ss_pred EEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCc
Confidence 9999999899999999999999999999999999999999999999999999999999999987654 23346
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHH
Q 019514 159 FGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGV 238 (340)
Q Consensus 159 ~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 238 (340)
.|+++.++++-+||..|+..+.+.| +.|-.+++....+++.++..+- ...|...... ..+++.. ...+...+
T Consensus 166 ~GD~lvi~GATlYaVSNv~EEflvk--n~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~t----l~w~~~i-~~yl~f~L 237 (336)
T KOG2766|consen 166 KGDFLVIAGATLYAVSNVSEEFLVK--NADRVELMGFLGLFGAIISAIQ-FIFERHHVST----LHWDSAI-FLYLRFAL 237 (336)
T ss_pred cCcEEEEecceeeeeccccHHHHHh--cCcHHHHHHHHHHHHHHHHHHH-Hhhhccceee----EeehHHH-HHHHHHHH
Confidence 7999999999999999999999999 7899999999999999888776 4444432221 1112111 12222333
Q ss_pred HHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHh
Q 019514 239 LAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGY 302 (340)
Q Consensus 239 ~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~ 302 (340)
.-++..-..-.++|..+++..++--......+.++ ..||-.++|...+.++.+..|.++|..
T Consensus 238 ~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~ 299 (336)
T KOG2766|consen 238 TMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST 299 (336)
T ss_pred HHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence 33333333446688899998888878888888887 667777999999999999999999953
No 32
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.73 E-value=4.3e-17 Score=136.47 Aligned_cols=269 Identities=16% Similarity=0.272 Sum_probs=207.0
Q ss_pred HHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHHHHHHHHHHHhhhhhcc-cchhH
Q 019514 29 ITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRY-IPVSF 107 (340)
Q Consensus 29 ~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~ 107 (340)
..-+.+.+. +-..-..+++.|++.-..--++.. .+ ....+++-+.+.++..-..+...+.+.|+++++ +|.+.
T Consensus 20 v~lE~L~~~-~pgsgNLITFaqFlFia~eGlif~--sk---f~~~k~kiplk~Y~i~V~mFF~vnv~NN~al~f~I~~Pl 93 (330)
T KOG1583|consen 20 VFLELLVRN-EPGSGNLITFAQFLFIATEGLIFT--SK---FFTVKPKIPLKDYAITVAMFFIVNVTNNYALKFNIPMPL 93 (330)
T ss_pred HHHHHHHHh-CCCCeeehHHHHHHHHHHhceeee--cc---ccccCCCCchhhhheehheeeeeeeeccceeeecccceE
Confidence 334555553 444578999999987665444332 22 112223445566666666677778899999988 79999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeecc---cc---------c---c--h--HHHHHHHHHHH
Q 019514 108 MQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT---EL---------S---F--N--MFGFCAALFGC 168 (340)
Q Consensus 108 ~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~---~~---------~---~--~--~~G~~~~l~~~ 168 (340)
..++++.+++.+++++++++|+|++.+|+.++.++.+|+++.... |. + . . ..|+.+..++.
T Consensus 94 HiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al 173 (330)
T KOG1583|consen 94 HIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFAL 173 (330)
T ss_pred EEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999997542 11 0 0 1 36889999999
Q ss_pred HHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhc-----------ccCCCchHHHHHHHHHH
Q 019514 169 LATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWL-----------STHPSPWSAFIIIFSSG 237 (340)
Q Consensus 169 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~l~~~~ 237 (340)
+..|....++|...++++-++-+.++|....+.+..+ +..+.-...|. .....-+..|+.++..+
T Consensus 174 ~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Fl----f~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~ 249 (330)
T KOG1583|consen 174 LLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFL----FMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNV 249 (330)
T ss_pred HHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHH----HhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHH
Confidence 9999999999999999999999999998877655433 22221111111 01112456788899999
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhhhhh
Q 019514 238 VLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLL 307 (340)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~~~~ 307 (340)
+.-+.+.-..+.+..++++.++++.-.++...+.++|.+.|++++|++.|+|..++..|.++|.....++
T Consensus 250 L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~~~ 319 (330)
T KOG1583|consen 250 LTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWNHP 319 (330)
T ss_pred HHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 9888887777888899999999999999999999999999999999999999999999999998655433
No 33
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.72 E-value=1.1e-16 Score=129.31 Aligned_cols=143 Identities=33% Similarity=0.596 Sum_probs=128.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc-----CCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccC-----CCchHH
Q 019514 160 GFCAALFGCLATSTKTILAESLLHS-----YKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTH-----PSPWSA 229 (340)
Q Consensus 160 G~~~~l~~~~~~a~~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 229 (340)
|+++++.++++.|+++++.|+.+++ .+.++.+++.+.++.+.+.++|.....|.+......... ......
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 7889999999999999999999987 589999999999999999999999998887643222211 124467
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHh
Q 019514 230 FIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGY 302 (340)
Q Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~ 302 (340)
+..++.+|+.++..|++.+.++++++|++.++.+.+|.+..++.|++++||++|+.++.|+++.+.|..+|++
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999874
No 34
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.40 E-value=1.5e-12 Score=104.12 Aligned_cols=226 Identities=15% Similarity=0.144 Sum_probs=169.1
Q ss_pred CcchhhHHhHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeeccc
Q 019514 74 EPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE 153 (340)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~ 153 (340)
+-|....+..|.+++..+.++.+..++..++++.++.+..+.--|+.+++++++|+|+...++++.++.+.|+++.+..|
T Consensus 48 nik~~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D 127 (290)
T KOG4314|consen 48 NIKLFFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD 127 (290)
T ss_pred eeeeeeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc
Confidence 33445667778889999999999999999999999999999999999999999999999999999999999999998543
Q ss_pred --ccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHH-HHHHHHHHHH-HHHHHH-HHhcccchhhhcccCCCchH
Q 019514 154 --LSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINT-VYYMAPFATM-ILSIPA-LLLEGSGIMDWLSTHPSPWS 228 (340)
Q Consensus 154 --~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~ 228 (340)
...++.|+.++++++...|+|.|..|...+..+...... +....++... ..+|.. +.+.+. ..|......+
T Consensus 128 N~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~V--E~~qsFA~~P-- 203 (290)
T KOG4314|consen 128 NEHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGV--EHLQSFAAAP-- 203 (290)
T ss_pred chhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhch--HHHHHHhhCC--
Confidence 557899999999999999999999999988655443332 1111111111 112222 222221 1121111222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhh
Q 019514 229 AFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIR 304 (340)
Q Consensus 229 ~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~ 304 (340)
|..+.....+....|+....-+....|...|+-.....+....++.++-+-.++...+.|..+++.|.++.-...
T Consensus 204 -WG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~ 278 (290)
T KOG4314|consen 204 -WGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE 278 (290)
T ss_pred -chhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence 455556666666666666667788888888888888888888888887666799999999999999998866543
No 35
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.35 E-value=4.3e-12 Score=108.83 Aligned_cols=193 Identities=16% Similarity=0.089 Sum_probs=119.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhcee--------------------eecccc-------cc
Q 019514 104 PVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILL--------------------TSVTEL-------SF 156 (340)
Q Consensus 104 ~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i--------------------~~~~~~-------~~ 156 (340)
+.+.....++..++++++..+.+.+||++..++++..+...|++. ...++. +.
T Consensus 3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~ 82 (222)
T TIGR00803 3 SVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGN 82 (222)
T ss_pred cccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccccccc
Confidence 445555556666666666666555666556666666555555543 332221 23
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHH
Q 019514 157 NMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSS 236 (340)
Q Consensus 157 ~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 236 (340)
...|....+.++++.+...++.|+..|+++.+.+.......+.+.+.........+.....++.....++...|..++..
T Consensus 83 ~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (222)
T TIGR00803 83 PVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGLLN 162 (222)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHHHHH
Confidence 46788888888899999999999987754433222222222222222111111111111112221223343334333333
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHH
Q 019514 237 GVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFY 300 (340)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~ 300 (340)
.+ .+....+.+|+.+++..++...++++++.++++++|||++|..++.|..+++.|+.+|
T Consensus 163 a~----~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 163 VG----GGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred Hh----cCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 22 2334567789999999999999999999999999999999999999999999998765
No 36
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.25 E-value=2.1e-11 Score=94.56 Aligned_cols=118 Identities=20% Similarity=0.471 Sum_probs=94.6
Q ss_pred HHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHHHH-HHHHHHHhhhhhcccch
Q 019514 27 VIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFV-FCINIVLGNVSLRYIPV 105 (340)
Q Consensus 27 ~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~ 105 (340)
....+|...+ +.| |...+++|+..+.+ +..+....++++....+ .+.+...+..+++ ...+..+++++++++++
T Consensus 6 ~~~~~k~~~~--~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 80 (126)
T PF00892_consen 6 YSVFSKKLLK--KIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLS-PRQWLWLLFLGLLGTALAYLLYFYALKYISA 80 (126)
T ss_pred HHHHHHHHhc--cCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCC-hhhhhhhhHhhccceehHHHHHHHHHHhcch
Confidence 3456688887 466 99999999999997 55554454444323333 3345555566666 58899999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceee
Q 019514 106 SFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLT 149 (340)
Q Consensus 106 ~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~ 149 (340)
+..+++..+.|+++.+++++++||+++++++.|+.+++.|+.+.
T Consensus 81 ~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 81 SIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998764
No 37
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.25 E-value=1.1e-10 Score=87.06 Aligned_cols=132 Identities=19% Similarity=0.110 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHHHHHHHH
Q 019514 13 SLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCIN 92 (340)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (340)
.++.+++|... ....|..++ +.| |.+-+..|-.+....+..+....++.+....-..+.|......|+..+.+
T Consensus 8 ALLsA~fa~L~----~iF~KIGl~--~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~gls 80 (140)
T COG2510 8 ALLSALFAGLT----PIFAKIGLE--GVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLS 80 (140)
T ss_pred HHHHHHHHHHH----HHHHHHhcc--ccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHH
Confidence 33444444443 345588888 567 99999999999888888776666654433111234677777778888999
Q ss_pred HHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeec
Q 019514 93 IVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV 151 (340)
Q Consensus 93 ~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~ 151 (340)
..+++.+++.-.++-..-+..++|+++.+++++++|||++..+|+|++++.+|+++.+.
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 99999999999999999999999999999999999999999999999999999998764
No 38
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.22 E-value=5.8e-11 Score=88.44 Aligned_cols=135 Identities=18% Similarity=0.140 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHHH
Q 019514 160 GFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVL 239 (340)
Q Consensus 160 G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 239 (340)
..++++++++++++..++.|--.+ +.||.......+.....++.......+.+. .....+...|..++.+|+.
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g~~~-----~~~~~~~k~~lflilSGla 76 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTGNWQ-----AGGEIGPKSWLFLILSGLA 76 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcCcee-----cccccCcceehhhhHHHHH
Confidence 357899999999999999998888 678888888888777777666666554432 1111233347788899988
Q ss_pred HHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHH
Q 019514 240 AFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYG 301 (340)
Q Consensus 240 ~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~ 301 (340)
+....+.+|+.++.-.+..+..++-..++++++++++++||++|..+++|++++..|.++..
T Consensus 77 ~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 77 GGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 88888899999999999999999999999999999999999999999999999999987643
No 39
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.16 E-value=7.3e-09 Score=89.28 Aligned_cols=209 Identities=15% Similarity=0.111 Sum_probs=157.2
Q ss_pred hhhHHhHHHHHHHHHHHHHhhhhhcccchhHHHHH-HHHHHHHHHHHHHHHhhcccchhhhh----hhhhhhhhceeeec
Q 019514 77 DRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVWRKYFDWRIWA----SLVPIVGGILLTSV 151 (340)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~~l~~~~l~e~~~~~~~~----~i~l~~~Gv~i~~~ 151 (340)
..+...+..|++...++..++.++++++++.+.-+ ...+.+.+.+.+.++++|.-+..++. +++++++|+.+.+.
T Consensus 43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~ 122 (269)
T PF06800_consen 43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY 122 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence 46677788899999999999999999999865555 57888889999999999998877754 88999999999886
Q ss_pred cccc--------chHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccC
Q 019514 152 TELS--------FNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTH 223 (340)
Q Consensus 152 ~~~~--------~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (340)
.|.+ ....|+...+++.+.|..|.+..|.. +.++++..+=+..-..+..+.+.... ..... .
T Consensus 123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~----~~~~~~~~lPqaiGm~i~a~i~~~~~-~~~~~-----~ 192 (269)
T PF06800_consen 123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF----HVSGWSAFLPQAIGMLIGAFIFNLFS-KKPFF-----E 192 (269)
T ss_pred ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc----CCChhHhHHHHHHHHHHHHHHHhhcc-ccccc-----c
Confidence 5422 22569999999999999999998773 56787776644432222222222222 11111 1
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccch----hhhhhHHhHhHHH
Q 019514 224 PSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMN----AVGCAITLIGCTF 299 (340)
Q Consensus 224 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~----~~G~~li~~g~~~ 299 (340)
.. -+.-+..|++....|+..+...++.+..+.-.+..+..+.+.+.|.++++|+-+.++ ++|+++++.|.++
T Consensus 193 k~----~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 193 KK----SWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred cc----hHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 11 134456777777778888888999999999999999999999999999999988664 4588888887654
No 40
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.15 E-value=1.1e-10 Score=88.83 Aligned_cols=107 Identities=18% Similarity=0.372 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCC-CcCCcchhhHHhHHHHHHHH-HHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 019514 48 CIHFICSSIGAYLVIKVLKLKPL-ITVEPEDRWRRIFPMSFVFC-INIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWL 125 (340)
Q Consensus 48 ~~r~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~ 125 (340)
.+|+..+.+++..+...+++.+. .+..+++.+..+...+++.. .+..++++|+++.| +....+.++.|+++++++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 57888888887776666443321 11112344555566566664 88999999999999 58889999999999999999
Q ss_pred Hhhcccchhhhhhhhhhhhhceeeeccccc
Q 019514 126 VWRKYFDWRIWASLVPIVGGILLTSVTELS 155 (340)
Q Consensus 126 ~l~e~~~~~~~~~i~l~~~Gv~i~~~~~~~ 155 (340)
++|||++++++.++.++++|+++...++.+
T Consensus 81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 81 FFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999999999998877654
No 41
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.12 E-value=5.1e-10 Score=86.66 Aligned_cols=124 Identities=17% Similarity=0.300 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHHH-HHHHHHHH
Q 019514 169 LATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVL-AFCLNFSI 247 (340)
Q Consensus 169 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~ 247 (340)
++||.+.+..|+..+ +.|+.....+....+.+ .++.....+..+.. ..+...+......+.+ ....+...
T Consensus 1 ~~~a~~~~~~k~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLK--KISPLSITFWRFLIAGI-LLILLLILGRKPFK------NLSPRQWLWLLFLGLLGTALAYLLY 71 (126)
T ss_pred ceeeeHHHHHHHHhc--cCCHHHHHHHHHHHHHH-HHHHHHhhcccccc------CCChhhhhhhhHhhccceehHHHHH
Confidence 468889999999998 58999999999999987 66666655443211 1111123334444444 45666677
Q ss_pred HHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHH
Q 019514 248 FYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYG 301 (340)
Q Consensus 248 ~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~ 301 (340)
+..+++.++...+....++|+++.++++++++|++++.+++|+++++.|+.+..
T Consensus 72 ~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 72 FYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999999999999999999998754
No 42
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.92 E-value=4.1e-08 Score=86.13 Aligned_cols=137 Identities=9% Similarity=0.114 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccch--hhhcccCCCchHHHHHHHHHH
Q 019514 160 GFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGI--MDWLSTHPSPWSAFIIIFSSG 237 (340)
Q Consensus 160 G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~ 237 (340)
|..+.++++++|+...+..|. .. +.+|.++.++...++.+++.+.......... ......... ..+..+...+
T Consensus 3 g~~~~i~a~~~wg~~~~~~k~-~~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g 77 (256)
T TIGR00688 3 GIIVSLLASFLFGYMYYYSKL-LK--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKR--PLILSLLLCG 77 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHH-hc--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccc--hHHHHHHHHH
Confidence 888999999999999999998 44 5899999999999998877665544322110 011000011 1234455666
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHH
Q 019514 238 VLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYG 301 (340)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~ 301 (340)
+.....+...+..++++++.++++..++.|+++.++++++++|+++.+++.|.++.++|+.+..
T Consensus 78 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 78 LLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 6666666777888999999999999999999999999999999999999999999999988653
No 43
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.90 E-value=4.9e-08 Score=87.49 Aligned_cols=142 Identities=6% Similarity=0.020 Sum_probs=107.5
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHH
Q 019514 154 LSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIII 233 (340)
Q Consensus 154 ~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 233 (340)
.+....|.++.+.++++|+...+..|.. . +.+|.++.++...++.+++.+............ .. ..++..+...
T Consensus 3 ~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~--~~-~~~~~~~~~~ 76 (296)
T PRK15430 3 AKQTRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQWSYLK--TL-IQTPQKIFML 76 (296)
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHH--HH-HcCHHHHHHH
Confidence 3445679999999999999999999764 4 589999999999998887776654332211100 00 0112222333
Q ss_pred HHHHHHHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHH
Q 019514 234 FSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYG 301 (340)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~ 301 (340)
+..+......+...++.+++.++.+.++..++.|+++.++++++++|+++.++++|.++.+.|+.+..
T Consensus 77 ~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 77 AVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 34444455556677888999999999999999999999999999999999999999999999988754
No 44
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.85 E-value=1e-07 Score=83.69 Aligned_cols=129 Identities=12% Similarity=0.123 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHHHHH-
Q 019514 11 FRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVF- 89 (340)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 89 (340)
...+..+.+|.. .....|+..++.+.+ +.....+++.++.+++.+.....++.+ .. ..+.+...+..+++.
T Consensus 131 ~~~l~a~~~~a~----~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~ 202 (260)
T TIGR00950 131 LLGLGSGISFAL----GTVLYKRLVKKEGPE-LLQFTGWVLLLGALLLLPFAWFLGPNP--QA-LSLQWGALLYLGLIGT 202 (260)
T ss_pred HHHHHHHHHHHH----HHHHHhHHhhcCCch-HHHHHHHHHHHHHHHHHHHHHhcCCCC--Cc-chHHHHHHHHHHHHHH
Confidence 333444444444 444568877643332 445555788888888777654433222 22 233454455555554
Q ss_pred HHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhce
Q 019514 90 CINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGIL 147 (340)
Q Consensus 90 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~ 147 (340)
.....++++++++.+++.++.+..+.|+++.++++++++|++++.++.|..+++.|+.
T Consensus 203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 6788899999999999999999999999999999999999999999999999999863
No 45
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.77 E-value=2.1e-07 Score=82.76 Aligned_cols=133 Identities=13% Similarity=0.189 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHHHH
Q 019514 161 FCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLA 240 (340)
Q Consensus 161 ~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (340)
+.+.+.+++++|...+..|+..++ .++. ..+....+.+++.|........ ..|.. .....+..++.++...
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~--~~~~--~~~~~~~~~~~l~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~ 73 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADK--EPDF--LWWALLAHSVLLTPYGLWYLAQ--VGWSR---LPATFWLLLAISAVAN 73 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc--hhHH--HHHHHHHHHHHHHHHHHHhccc--CCCCC---cchhhHHHHHHHHHHH
Confidence 578899999999999999987763 2333 3555555666666665532111 11111 1112345566677777
Q ss_pred HHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHh
Q 019514 241 FCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGY 302 (340)
Q Consensus 241 ~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~ 302 (340)
...+...+...++.++...+.+.+..|+++.++++++++|+++.++++|..+++.|+.+...
T Consensus 74 ~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 74 MVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 77777788889999999999999999999999999999999999999999999999987653
No 46
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.67 E-value=7.1e-07 Score=81.64 Aligned_cols=138 Identities=15% Similarity=0.135 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHH
Q 019514 159 FGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGV 238 (340)
Q Consensus 159 ~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 238 (340)
.-+..++..-++|+.+.++.|...+. +.++....++...++.++++|+....+..... ...++..+..+...|+
T Consensus 13 ~~~~~~~~~q~~~~~~~~~~k~a~~~-G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~-----~~~~~~~~~~l~l~g~ 86 (358)
T PLN00411 13 VFLTAMLATETSVVGISTLFKVATSK-GLNIYPFLGYSYLLASLLLLPSLFFTNRSRSL-----PPLSVSILSKIGLLGF 86 (358)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHC-CCCccHHHHHHHHHHHHHHHHHHHHHHHhccc-----CcchHHHHHHHHHHHH
Confidence 34567788889999999999999965 89999999999999999888887654321100 0112223455666666
Q ss_pred HHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhc------cCcccccchhhhhhHHhHhHHHHHh
Q 019514 239 LAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLI------FRNPISGMNAVGCAITLIGCTFYGY 302 (340)
Q Consensus 239 ~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~------~~e~~s~~~~~G~~li~~g~~~~~~ 302 (340)
++..++...+..++++++..++++.++.|+++.++++++ ++|+++..+++|.++.+.|+.+...
T Consensus 87 ~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~ 156 (358)
T PLN00411 87 LGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF 156 (358)
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence 665555567788999999999999999999999999999 6999999999999999999987654
No 47
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.57 E-value=2.6e-07 Score=82.34 Aligned_cols=207 Identities=10% Similarity=0.109 Sum_probs=119.9
Q ss_pred HHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeeccccc----c---h--
Q 019514 87 FVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELS----F---N-- 157 (340)
Q Consensus 87 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~~~----~---~-- 157 (340)
+.+..+..+.+.|+.+.|.+..+-+.+...++.++++..++|||++++.+.|+.+++.|..+.....++ . +
T Consensus 58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~ 137 (300)
T PF05653_consen 58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELI 137 (300)
T ss_pred HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHH
Confidence 455777888899999999999999999999999999999999999999999999999999876532111 0 0
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHH---H---HHHHHHH-HHhcccchhhhcccC
Q 019514 158 -------MFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFA---T---MILSIPA-LLLEGSGIMDWLSTH 223 (340)
Q Consensus 158 -------~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~-~~~~~~~~~~~~~~~ 223 (340)
...+...... +...+.....++..++ + +..|....+ . +..=... .+.+... .+..
T Consensus 138 ~~~~~~~fl~y~~~~~~-~~~~L~~~~~~r~g~~---~---i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~----g~~~ 206 (300)
T PF05653_consen 138 ALLSQPGFLVYFILVLV-LILILIFFIKPRYGRR---N---ILVYISICSLIGSFTVLSAKAISILIKLTFS----GDNQ 206 (300)
T ss_pred HHhcCcceehhHHHHHH-HHHHHHHhhcchhccc---c---eEEEEEEeccccchhhhHHHHHHHHHHHHhc----Cchh
Confidence 1111111111 1112222222221111 1 111111111 0 0000000 0011000 0011
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhh-hhHHHhhhhhhccCcc--cccc----hhhhhhHHhHh
Q 019514 224 PSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNL-KVAVAVLVSWLIFRNP--ISGM----NAVGCAITLIG 296 (340)
Q Consensus 224 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~-~~v~~~l~~~~~~~e~--~s~~----~~~G~~li~~g 296 (340)
-..+..|.+++....+........+..+++.++.......+. -...+++-|.++|+|- .+.. ...|+.+++.|
T Consensus 207 f~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~G 286 (300)
T PF05653_consen 207 FTYPLTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIG 286 (300)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHh
Confidence 123344555555555555555566788888887766655444 3667777888889875 4553 44577788888
Q ss_pred HHHHHhhh
Q 019514 297 CTFYGYIR 304 (340)
Q Consensus 297 ~~~~~~~~ 304 (340)
+.+.+..+
T Consensus 287 V~lL~~~~ 294 (300)
T PF05653_consen 287 VFLLSSSK 294 (300)
T ss_pred hheeeccC
Confidence 88765433
No 48
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.56 E-value=3.4e-05 Score=69.52 Aligned_cols=224 Identities=10% Similarity=0.067 Sum_probs=140.3
Q ss_pred hhhHHhHHHHHHHHHHHHHhhhhhcccchhHHHHH-HHHHHHHHHHHHHHHhhccc---ch----hhhhhhhhhhhhcee
Q 019514 77 DRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVWRKYF---DW----RIWASLVPIVGGILL 148 (340)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~~l~~~~l~e~~---~~----~~~~~i~l~~~Gv~i 148 (340)
..+...+..|++...++..+..++++++++...-+ ..++.+...+...++++|-. +. .-..+++++++|+++
T Consensus 71 ~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l 150 (345)
T PRK13499 71 STLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAI 150 (345)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHH
Confidence 35666777899999999999999999999976555 58888889999888888644 32 346788999999999
Q ss_pred eec----ccc---------cchHHHHHHHHHHHHHHHHHH-------HHHHHHhccCCCChHHHHHHHHH---HHHHHHH
Q 019514 149 TSV----TEL---------SFNMFGFCAALFGCLATSTKT-------ILAESLLHSYKFDSINTVYYMAP---FATMILS 205 (340)
Q Consensus 149 ~~~----~~~---------~~~~~G~~~~l~~~~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 205 (340)
.+. .|. .....|+++++++.+.++.++ ...+.... .+.++.....-+.. .+..+.-
T Consensus 151 ~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~-~g~~~~~~~lp~~~~~~~G~~~~n 229 (345)
T PRK13499 151 VGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAA-LGVDPLYAALPSYVVIMGGGAITN 229 (345)
T ss_pred HHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhh-cCCCchHHHHHHHHHHHHHHHHHH
Confidence 776 332 123579999999999999999 44433222 24455443332222 2222111
Q ss_pred -HHHHHh--cccchhhhcccCC--Cc-hHHHHHHHHHHHHHHHHHHHHHHHHhccchhH----HHHHhhhhhHHHhhhhh
Q 019514 206 -IPALLL--EGSGIMDWLSTHP--SP-WSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVT----FNVAGNLKVAVAVLVSW 275 (340)
Q Consensus 206 -~~~~~~--~~~~~~~~~~~~~--~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~----~s~~~~~~~v~~~l~~~ 275 (340)
...... ......+..+... .+ +.-.......|+.....+..+.....+.+... ..+-+.+..+++.+.|.
T Consensus 230 ~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi 309 (345)
T PRK13499 230 LGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL 309 (345)
T ss_pred HHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh
Confidence 111110 1111111111111 00 12234446666666666666655555553332 22444677789999999
Q ss_pred hccCcccc------cchhhhhhHHhHhHHHHHh
Q 019514 276 LIFRNPIS------GMNAVGCAITLIGCTFYGY 302 (340)
Q Consensus 276 ~~~~e~~s------~~~~~G~~li~~g~~~~~~ 302 (340)
+ ++|.-+ ...++|+++++.|..+...
T Consensus 310 ~-lkE~K~a~~k~~~~l~~G~vliI~g~~lig~ 341 (345)
T PRK13499 310 V-LKEWKGASRRPVRVLSLGCVVIILAANIVGL 341 (345)
T ss_pred h-hhhccCCCccchhHHHHHHHHHHHHHHHHhh
Confidence 5 899876 5568899999999887654
No 49
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.51 E-value=1.7e-06 Score=65.32 Aligned_cols=64 Identities=20% Similarity=0.360 Sum_probs=59.5
Q ss_pred HHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeee
Q 019514 87 FVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTS 150 (340)
Q Consensus 87 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~ 150 (340)
++++....+...+++.+|.+.+..+.++.++++.+.+++++|||+++++++|+.++++|+++..
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4567888899999999999999999999999999999999999999999999999999997754
No 50
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.41 E-value=1.2e-05 Score=64.59 Aligned_cols=129 Identities=12% Similarity=0.051 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHhhhc-----CCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCc----CC------cchhhHHhHHH
Q 019514 21 WVFNVTVIITNKWIFQK-----LDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLIT----VE------PEDRWRRIFPM 85 (340)
Q Consensus 21 ~~~~~~~~~~~k~~~~~-----~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~----~~------~~~~~~~~~~~ 85 (340)
.+....-....|..+++ .+.+ |+.+.......+.+++.+.....+..+..+ .. ..+.+...+..
T Consensus 9 ~~~~al~~v~~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (153)
T PF03151_consen 9 SLFSALRNVLIKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILS 87 (153)
T ss_pred HHHHHHHHHHHHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHH
Confidence 33444445566777776 4666 888888888888888887766655433111 00 12345555566
Q ss_pred HHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeee
Q 019514 86 SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTS 150 (340)
Q Consensus 86 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~ 150 (340)
+++....+...+..++++++-+.+++.....+.+.++++++++|+++..++.|+++.++|+.+.+
T Consensus 88 ~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys 152 (153)
T PF03151_consen 88 GLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS 152 (153)
T ss_pred HHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence 77778889999999999999999999999999999999999999999999999999999998754
No 51
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.40 E-value=6e-06 Score=73.87 Aligned_cols=109 Identities=11% Similarity=0.072 Sum_probs=82.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHHHH-HHHHHHHhhhhhcccchhHHHHHHHHHHHHHHH
Q 019514 43 PLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFV-FCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV 121 (340)
Q Consensus 43 p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~ 121 (340)
+...+.+++.++.+.+.++......... ..+..+.+...+..+++ ......++++++++.+++.++++..+.|++.++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i 255 (292)
T PRK11272 177 GMMAGAAEMLAAGVVLLIASLLSGERLT-ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVL 255 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHcCCccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence 4567788888888776665433222111 11122344455555555 357788999999999999999999999999999
Q ss_pred HHHHHhhcccchhhhhhhhhhhhhceeeecc
Q 019514 122 LQWLVWRKYFDWRIWASLVPIVGGILLTSVT 152 (340)
Q Consensus 122 l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~ 152 (340)
+++++++|++++.+++|..+++.|+.+....
T Consensus 256 ~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~ 286 (292)
T PRK11272 256 LGTGLGGETLSPIEWLALGVIVFAVVLVTLG 286 (292)
T ss_pred HHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999876543
No 52
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.29 E-value=1.8e-05 Score=70.91 Aligned_cols=129 Identities=12% Similarity=0.141 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHH
Q 019514 159 FGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGV 238 (340)
Q Consensus 159 ~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 238 (340)
.+++..+.++++|+......|...+ +.+|.....+....+.+++.++. ..+.. .... +..++.+++
T Consensus 4 ~~~l~~l~a~~~Wg~~~~~~k~~~~--~~~P~~~~~~R~~~a~l~l~~~~---~~~~~------~~~~---~~~~~~~~l 69 (295)
T PRK11689 4 KATLIGLIAILLWSTMVGLIRGVSE--SLGPVGGAAMIYSVSGLLLLLTV---GFPRL------RQFP---KRYLLAGGL 69 (295)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHc--cCChHHHHHHHHHHHHHHHHHHc---ccccc------cccc---HHHHHHHhH
Confidence 4677899999999999999999887 68999999999988888777642 11111 0111 112222333
Q ss_pred HHHHHHHHHHHHH----hccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHH
Q 019514 239 LAFCLNFSIFYVI----HSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYG 301 (340)
Q Consensus 239 ~~~~~~~~~~~~~----~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~ 301 (340)
....++...+... +..++.+.+++.++.|+++.++++++++|++++.+++|+++.+.|+.+..
T Consensus 70 ~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~ 136 (295)
T PRK11689 70 LFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVL 136 (295)
T ss_pred HHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhhee
Confidence 3223333333333 45677888999999999999999999999999999999999999988765
No 53
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.25 E-value=2.9e-05 Score=69.49 Aligned_cols=118 Identities=13% Similarity=0.118 Sum_probs=81.5
Q ss_pred HHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHHHHH-HHHHHHhhhhhcccc
Q 019514 26 TVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVF-CINIVLGNVSLRYIP 104 (340)
Q Consensus 26 ~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~~~ 104 (340)
...+..|+..+ +.+ |.... +..+++.+.+.++...... ....+ ...+...+..+++. .+...++++++++.+
T Consensus 162 ~~~v~~r~~~~--~~~-~~~~~-~~~~~~~~~l~~~~~~~~~--~~~~~-~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~ 234 (293)
T PRK10532 162 IYILSGQRAGA--EHG-PATVA-IGSLIAALIFVPIGALQAG--EALWH-WSILPLGLAVAILSTALPYSLEMIALTRLP 234 (293)
T ss_pred HHHHHHHHHhc--cCC-chHHH-HHHHHHHHHHHHHHHHccC--cccCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34455576655 333 55554 4455555555554433221 11111 12233334445554 567778999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeee
Q 019514 105 VSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTS 150 (340)
Q Consensus 105 ~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~ 150 (340)
++.++.+..++|++..++++++++|+++..+++|..++++|++...
T Consensus 235 a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~ 280 (293)
T PRK10532 235 TRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST 280 (293)
T ss_pred hhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999887764
No 54
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.21 E-value=4.2e-05 Score=68.66 Aligned_cols=124 Identities=11% Similarity=0.095 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHHHH
Q 019514 161 FCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLA 240 (340)
Q Consensus 161 ~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (340)
.++.++++++|+...+..|...+ +.+|....++...++.+.++++.. .. ... +..+...|+..
T Consensus 6 ~l~~l~~~~~Wg~~~~~~k~~~~--~~~p~~~~~~R~~~a~~~l~~~~~---~~---------~~~---~~~~~~~g~~~ 68 (299)
T PRK11453 6 GVLALLVVVVWGLNFVVIKVGLH--NMPPLMLAGLRFMLVAFPAIFFVA---RP---------KVP---LNLLLGYGLTI 68 (299)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHHhc---CC---------CCc---hHHHHHHHHHH
Confidence 35688999999999999998877 689999999998887665544321 10 001 11222233332
Q ss_pred HHHH-HHHHHHHhc-cchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHH
Q 019514 241 FCLN-FSIFYVIHS-TTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYG 301 (340)
Q Consensus 241 ~~~~-~~~~~~~~~-~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~ 301 (340)
...+ ...+...++ .++...+++..+.|+++.++++++++|+++..+++|.++.++|+.+..
T Consensus 69 ~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~ 131 (299)
T PRK11453 69 SFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLI 131 (299)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhc
Confidence 2222 233445565 577888999999999999999999999999999999999999988765
No 55
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.19 E-value=3.3e-05 Score=66.63 Aligned_cols=141 Identities=10% Similarity=0.099 Sum_probs=109.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHH
Q 019514 157 NMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSS 236 (340)
Q Consensus 157 ~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 236 (340)
+..|+++++.+-+.|+.--.+.|.+. +.++.++..+....+.+.++........+... .. ....+..+.....+
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll~---~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~--~~-~~~~p~~~~~~~l~ 78 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLLE---PLPATEILAHRVIWSFPFMLALLFLLRQWREL--KQ-LLKQPKTLLMLALT 78 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHH--HH-HHhCcHHHHHHHHH
Confidence 45799999999999999999988765 46999999999999998887766655443221 11 22233345566666
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhh
Q 019514 237 GVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYI 303 (340)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~ 303 (340)
+..-........+...+-...++|.-.+.+|.+.+++|.++++|++|..|++..++..+|+..-.+.
T Consensus 79 a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~ 145 (293)
T COG2962 79 ALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL 145 (293)
T ss_pred HHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 6655554445567788889999999999999999999999999999999999999999998875443
No 56
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.19 E-value=4.1e-05 Score=59.22 Aligned_cols=118 Identities=14% Similarity=0.113 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHH
Q 019514 159 FGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGV 238 (340)
Q Consensus 159 ~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 238 (340)
.|+++.+.+.++.+...++.|+-.++.+ +.+.... .. .. . . ...++ ...+..|+
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g--~~~~~~~-~~-~~---~-~-~~~~p-----------------~~~i~lgl 55 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLP--LLSHAWD-FI-AA---L-L-AFGLA-----------------LRAVLLGL 55 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCC--CccchhH-HH-HH---H-H-HHhcc-----------------HHHHHHHH
Confidence 3788899999999999999999887432 2211111 00 00 0 0 00110 01122223
Q ss_pred HHHHH-HHHHHHHHhccchhHHHHHhhhhhHHHhhhhhh--ccCcccccchhhhhhHHhHhHHHHHh
Q 019514 239 LAFCL-NFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWL--IFRNPISGMNAVGCAITLIGCTFYGY 302 (340)
Q Consensus 239 ~~~~~-~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~--~~~e~~s~~~~~G~~li~~g~~~~~~ 302 (340)
.++.. .+.....+++.+...+.......++...+.++. ++||++|+.+++|.++++.|+++.++
T Consensus 56 ~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~ 122 (129)
T PRK02971 56 AGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINL 122 (129)
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 32222 234456689999988888877777777777774 89999999999999999999999764
No 57
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.19 E-value=1.1e-05 Score=72.63 Aligned_cols=126 Identities=10% Similarity=0.003 Sum_probs=86.2
Q ss_pred HHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcC---------CcchhhHHhHHHHH-HHHHHHH
Q 019514 25 VTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITV---------EPEDRWRRIFPMSF-VFCINIV 94 (340)
Q Consensus 25 ~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-~~~~~~~ 94 (340)
.......|...++.+.+ |..++.+++..+.+.+.++.......+.... .....+...+..+. ++...+.
T Consensus 158 a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (302)
T TIGR00817 158 VSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQ 236 (302)
T ss_pred HHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHH
Confidence 33445667766532355 8889999999888877776544332111000 00001111222222 3333345
Q ss_pred HhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeec
Q 019514 95 LGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV 151 (340)
Q Consensus 95 ~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~ 151 (340)
+++.+++++++.++++.....|+++.++++++++|+++..+++|.+++++|+.+...
T Consensus 237 ~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 237 VAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence 667899999999999999999999999999999999999999999999999987654
No 58
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.15 E-value=0.00011 Score=67.53 Aligned_cols=138 Identities=8% Similarity=-0.083 Sum_probs=98.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC-hHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHH
Q 019514 157 NMFGFCAALFGCLATSTKTILAESLLHSYKFD-SINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFS 235 (340)
Q Consensus 157 ~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 235 (340)
++.-..+.++-=.+...++...|..++ ..+ |+++..++..++.++..+... .......+. ......+..++.
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~--~~~~P~~l~~~~~~~~~l~~~~~~~-~~~~~~~~~----~~~~~~~~~llp 119 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALN--MLPLPWTISSLQLFVGWLFALLYWA-TGFRKIPRI----KSLKLFLKNFLP 119 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHH--hCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCC----CCHHHHHHHHHH
Confidence 333334444444455667888999888 467 999999999988765544322 111100000 001123456666
Q ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHH
Q 019514 236 SGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYG 301 (340)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~ 301 (340)
.|++....+...+..++++++...+++..++|+++.++++++++|+++.+++.|+++++.|+.+..
T Consensus 120 ~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~ 185 (350)
T PTZ00343 120 QGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS 185 (350)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence 777766666666678899999999999999999999999999999999999999999999998754
No 59
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=98.06 E-value=1.1e-06 Score=73.51 Aligned_cols=240 Identities=15% Similarity=0.122 Sum_probs=158.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHHHHHHHHHHHhhhhhcccchhHHHHH-HHHHHHHHHH
Q 019514 43 PLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVV 121 (340)
Q Consensus 43 p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~~ 121 (340)
|...+..-.+-+.++....+.. ..| .++.+ .+..-+..|++...++..++.+.++++++.+.-+ ....-+-+.+
T Consensus 28 p~qQ~lGtT~GALifaiiv~~~--~~p--~~T~~-~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL 102 (288)
T COG4975 28 PYQQTLGTTLGALIFAIIVFLF--VSP--ELTLT-IFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSL 102 (288)
T ss_pred hhHhhhhccHHHHHHHHHHhee--ecC--ccchh-hHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhcee
Confidence 6665555555555444443332 122 22322 4555667788889999999999999998876655 4677888889
Q ss_pred HHHHHhhcccchhh----hhhhhhhhhhceeeecccc--------cchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCh
Q 019514 122 LQWLVWRKYFDWRI----WASLVPIVGGILLTSVTEL--------SFNMFGFCAALFGCLATSTKTILAESLLHSYKFDS 189 (340)
Q Consensus 122 l~~~~l~e~~~~~~----~~~i~l~~~Gv~i~~~~~~--------~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~ 189 (340)
++.+.++|-.++.+ ..++.+++.|+.+.+..|. +.-..|+...+.+.+.|-.|.+..+... .|.
T Consensus 103 ~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~----v~g 178 (288)
T COG4975 103 FGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFD----VDG 178 (288)
T ss_pred eeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeecccc----ccc
Confidence 99999999998877 4588999999999987653 1124688888889999999999887753 344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhhhhHH
Q 019514 190 INTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAV 269 (340)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~ 269 (340)
++...-+..-..+..+......+.....+ + -+.-...|+.....|...+...++.+..+.=.+..+..+.
T Consensus 179 ~saiLPqAiGMv~~ali~~~~~~~~~~~K---------~-t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgVii 248 (288)
T COG4975 179 LSAILPQAIGMVIGALILGFFKMEKRFNK---------Y-TWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVII 248 (288)
T ss_pred hhhhhHHHHHHHHHHHHHhhcccccchHH---------H-HHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeee
Confidence 44433333222222222222221111111 1 2344556666666677776666766655555556677888
Q ss_pred HhhhhhhccCcccccchh----hhhhHHhHhHHHHH
Q 019514 270 AVLVSWLIFRNPISGMNA----VGCAITLIGCTFYG 301 (340)
Q Consensus 270 ~~l~~~~~~~e~~s~~~~----~G~~li~~g~~~~~ 301 (340)
+++-|.++++|+-|..++ +|.+++++|.++..
T Consensus 249 sTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg 284 (288)
T COG4975 249 STIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG 284 (288)
T ss_pred eecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence 899999999999987765 47788888777644
No 60
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.04 E-value=8.3e-05 Score=56.42 Aligned_cols=72 Identities=22% Similarity=0.413 Sum_probs=58.0
Q ss_pred HHHHHHHHHH-HHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhh
Q 019514 232 IIFSSGVLAF-CLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIR 304 (340)
Q Consensus 232 ~l~~~~~~~~-~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~ 304 (340)
..+..|+++. ..+...+...++.++ ..+....+.|+++.++++++++|+++..+++|.+++++|+.+.....
T Consensus 36 ~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~ 108 (113)
T PF13536_consen 36 WLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSD 108 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence 3444444444 444555677888885 78889999999999999999999999999999999999999987644
No 61
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.01 E-value=3.7e-05 Score=67.14 Aligned_cols=209 Identities=8% Similarity=0.072 Sum_probs=125.4
Q ss_pred HHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeecccccc---------
Q 019514 86 SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSF--------- 156 (340)
Q Consensus 86 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~~~~--------- 156 (340)
-+.+..+-...+.|+.+-|++..+-+.+++.+..++++..+++||++..-.+|..++++|..+++...++.
T Consensus 71 ~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el 150 (335)
T KOG2922|consen 71 MLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEV 150 (335)
T ss_pred HHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHH
Confidence 34567888888899999999999999999999999999999999999999999999999998877543211
Q ss_pred -------hHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHh-cccchh-hh-cccCCCc
Q 019514 157 -------NMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLL-EGSGIM-DW-LSTHPSP 226 (340)
Q Consensus 157 -------~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~-~~~~~~~ 226 (340)
..+.+...+...++ .-....|. +....+++.|..+.+.+..+-..-+- -+.... .. .......
T Consensus 151 ~~~~~~~~Fliy~~~iil~~~--il~~~~~p-----~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ql~~ 223 (335)
T KOG2922|consen 151 WELATEPGFLVYVIIIILIVL--ILIFFYAP-----RYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQLFY 223 (335)
T ss_pred HHHhcCccHHHHHHHHHHHHH--HHheeecc-----cccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCccccc
Confidence 11111111111111 11111111 11233344555544444211000000 000000 00 0011112
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhhh-hHHHhhhhhhccCcc--cccc----hhhhhhHHhHhHHH
Q 019514 227 WSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLK-VAVAVLVSWLIFRNP--ISGM----NAVGCAITLIGCTF 299 (340)
Q Consensus 227 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~-~v~~~l~~~~~~~e~--~s~~----~~~G~~li~~g~~~ 299 (340)
+..|..++....+........+.+++..++..++...+.. ..++++.|.++|.|- .+.. ...|+..++.|+.+
T Consensus 224 ~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~fl 303 (335)
T KOG2922|consen 224 PLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFL 303 (335)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeE
Confidence 2445555555555555544567778888777777666654 788888899999874 4433 45688888888877
Q ss_pred HH
Q 019514 300 YG 301 (340)
Q Consensus 300 ~~ 301 (340)
..
T Consensus 304 L~ 305 (335)
T KOG2922|consen 304 LH 305 (335)
T ss_pred ee
Confidence 64
No 62
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.89 E-value=4.1e-05 Score=59.21 Aligned_cols=72 Identities=17% Similarity=0.217 Sum_probs=63.2
Q ss_pred HhHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHH--Hhhcccchhhhhhhhhhhhhceeeecc
Q 019514 81 RIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWL--VWRKYFDWRIWASLVPIVGGILLTSVT 152 (340)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~--~l~e~~~~~~~~~i~l~~~Gv~i~~~~ 152 (340)
.....-+++.+...+++++++..|++.+..+.+..+..+.+.++. ++||+++..+++|+.++++|+.+...+
T Consensus 50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 344545677899999999999999999999999999888888885 799999999999999999999987654
No 63
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.87 E-value=0.00034 Score=63.05 Aligned_cols=140 Identities=11% Similarity=0.212 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCC-hHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHH
Q 019514 159 FGFCAALFGCLATSTKTILAESLLHSYKFD-SINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSG 237 (340)
Q Consensus 159 ~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 237 (340)
.+.+++-.-+++-+..++....+.++ +.+ |....+++...-.++..+......+ ..++....... |+.-+..+
T Consensus 13 ~~~~lgQ~lsl~~~~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~--~~~~~~~~~~~---~w~y~lla 86 (334)
T PF06027_consen 13 IVLLLGQVLSLCITGTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRG--FKKWLKVLKRP---WWKYFLLA 86 (334)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccc--cccchhhcchh---HHHHHHHH
Confidence 34445555555555555555555543 333 5445555554444444444332221 11222222222 34444457
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhh
Q 019514 238 VLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIR 304 (340)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~ 304 (340)
++-+..|+......++++.+...++.....+++.+++++++++++++.+++|.++++.|+.+.....
T Consensus 87 ~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD 153 (334)
T PF06027_consen 87 LLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD 153 (334)
T ss_pred HHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence 8888899999999999999999999999999999999999999999999999999999998866544
No 64
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.86 E-value=0.0004 Score=62.45 Aligned_cols=129 Identities=13% Similarity=0.061 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHhccCCCC--hHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHHHHHHHHHHH
Q 019514 170 ATSTKTILAESLLHSYKFD--SINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSI 247 (340)
Q Consensus 170 ~~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 247 (340)
++..+.+..|++.++...+ +..+.+.+.....+...+....... ......+ +.-....+++..+.....
T Consensus 11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~------~~~~~~~---~~~~~~~~~~~~~~~~~~ 81 (303)
T PF08449_consen 11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKF------PKSRKIP---LKKYAILSFLFFLASVLS 81 (303)
T ss_pred HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccc------cCCCcCh---HHHHHHHHHHHHHHHHHH
Confidence 3445668888888765445 6667777776666655554443330 1111112 223334445555666677
Q ss_pred HHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhhhhh
Q 019514 248 FYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLL 307 (340)
Q Consensus 248 ~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~~~~ 307 (340)
+..+++.+..+..+....+++.+.++++++++++.+..++.+.+++.+|+.+....+.++
T Consensus 82 ~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~ 141 (303)
T PF08449_consen 82 NAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSS 141 (303)
T ss_pred HHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccc
Confidence 788899999999999999999999999999999999999999999999999988755433
No 65
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.78 E-value=0.00039 Score=52.39 Aligned_cols=56 Identities=16% Similarity=0.192 Sum_probs=49.8
Q ss_pred HHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHH
Q 019514 246 SIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYG 301 (340)
Q Consensus 246 ~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~ 301 (340)
.....+++.+...+...-.+.++.+.++|+++|||++|+.+++|..+++.|+.+..
T Consensus 53 ~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 53 LWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 34566788888888888889999999999999999999999999999999998754
No 66
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.77 E-value=0.00041 Score=61.90 Aligned_cols=127 Identities=12% Similarity=-0.008 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHH----HHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHHH
Q 019514 12 RSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFI----CSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSF 87 (340)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (340)
+-+....+-.+........+|.. +.+ |...++.+.. .+.++..+. + +.+ +...+..+. .+..|+
T Consensus 152 ~Gi~~~l~sg~~y~~~~~~~~~~----~~~-~~~~~~~~~~g~~~~~~~~~~~~-~--~~~---~~~~~~~~~-~~~~Gi 219 (290)
T TIGR00776 152 KGILLLLMSTIGYLVYVVVAKAF----GVD-GLSVLLPQAIGMVIGGIIFNLGH-I--LAK---PLKKYAILL-NILPGL 219 (290)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHc----CCC-cceehhHHHHHHHHHHHHHHHHH-h--ccc---chHHHHHHH-HHHHHH
Confidence 34444444444444555566754 233 6666555544 444333322 1 111 112233343 444788
Q ss_pred HHHHHHHHhhhhhc-ccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhh----hhhhhhhhhceeee
Q 019514 88 VFCINIVLGNVSLR-YIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIW----ASLVPIVGGILLTS 150 (340)
Q Consensus 88 ~~~~~~~~~~~al~-~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~----~~i~l~~~Gv~i~~ 150 (340)
+....+.+++.+.+ +.+++.+.++.+..|+...+.+++++||+.+++++ +|.++++.|+.+..
T Consensus 220 ~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 220 MWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 88888989999999 99999999999999999999999999999999999 99999999987754
No 67
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.72 E-value=0.00039 Score=52.82 Aligned_cols=71 Identities=13% Similarity=0.231 Sum_probs=62.6
Q ss_pred hHHHHHHHHHHHHHhhhhhcccchhHHHHH-HHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeecc
Q 019514 82 IFPMSFVFCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT 152 (340)
Q Consensus 82 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~ 152 (340)
.....++++.+.++...+++++|.+.+..+ .....+.+.+.++++++|+++..+++++.++++|++.....
T Consensus 33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 345567788899999999999999987777 57999999999999999999999999999999999887543
No 68
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.71 E-value=0.0016 Score=51.04 Aligned_cols=132 Identities=14% Similarity=0.169 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHHH
Q 019514 160 GFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVL 239 (340)
Q Consensus 160 G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 239 (340)
..++++.+.++-+.+..+..++.+..+ +|..-.+.....+.+.+.......+..+. ......+ ++....|++
T Consensus 2 ~~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~~~---~~~~~~p----~w~~lGG~l 73 (138)
T PF04657_consen 2 YILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRPSL---ASLSSVP----WWAYLGGLL 73 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccccc---chhccCC----hHHhccHHH
Confidence 356788889999999999888887433 58888888888888888777776665422 2222223 233348888
Q ss_pred HHHHHHHHHHHHhccchhHHHHHhhh-hhHHHhhhhhh----ccCcccccchhhhhhHHhHhHHH
Q 019514 240 AFCLNFSIFYVIHSTTAVTFNVAGNL-KVAVAVLVSWL----IFRNPISGMNAVGCAITLIGCTF 299 (340)
Q Consensus 240 ~~~~~~~~~~~~~~~~a~~~s~~~~~-~~v~~~l~~~~----~~~e~~s~~~~~G~~li~~g~~~ 299 (340)
+..+.......+++.++......... +.+.+.+++.+ .-.+++++.+++|.++++.|+.+
T Consensus 74 G~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 74 GVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 88887778888899999888887666 46677777775 23467999999999999999763
No 69
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.70 E-value=0.0015 Score=57.84 Aligned_cols=140 Identities=15% Similarity=0.071 Sum_probs=96.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHH
Q 019514 157 NMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSS 236 (340)
Q Consensus 157 ~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 236 (340)
...+....++.++.++......|+...+ ..+.................+.... +. ......... .+...+..
T Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~---~~~~~~~~ 76 (292)
T COG0697 5 LLLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLLL-EP---RGLRPALRP---WLLLLLLA 76 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHh-hc---ccccccccc---hHHHHHHH
Confidence 3457778888889999999999888774 3455555555655555542222211 11 000011111 13444555
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhh-hccCcccccchhhhhhHHhHhHHHHHhhh
Q 019514 237 GVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSW-LIFRNPISGMNAVGCAITLIGCTFYGYIR 304 (340)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~-~~~~e~~s~~~~~G~~li~~g~~~~~~~~ 304 (340)
++.........+..++++++..........|+++.++++ ++++|++++.++.|..+.+.|+.+.....
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~ 145 (292)
T COG0697 77 LLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGG 145 (292)
T ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCC
Confidence 555555556667779999999999999999999999997 77799999999999999999999876543
No 70
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.67 E-value=0.00056 Score=51.97 Aligned_cols=55 Identities=16% Similarity=0.274 Sum_probs=44.2
Q ss_pred HHHhccch-hHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhh
Q 019514 249 YVIHSTTA-VTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYI 303 (340)
Q Consensus 249 ~~~~~~~a-~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~ 303 (340)
..+++.+. .-.++...+..+.+.+.|+++|||++|+.+++|+.+++.|++..+..
T Consensus 49 ~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 49 FAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 44555543 33455567789999999999999999999999999999999887543
No 71
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.56 E-value=0.001 Score=49.88 Aligned_cols=69 Identities=19% Similarity=0.364 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHhhhhhcccchhHHHHH-HHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeecc
Q 019514 84 PMSFVFCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT 152 (340)
Q Consensus 84 ~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~ 152 (340)
..-+++.....+...+++.+|.+.+..+ .....+.+.+.++++++|+++..+++++.++++|++.....
T Consensus 35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 4456778888888999999999987777 67899999999999999999999999999999999887543
No 72
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.53 E-value=0.00088 Score=49.22 Aligned_cols=69 Identities=13% Similarity=0.162 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHHHhhhhhcccchhHHH-HHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeee
Q 019514 82 IFPMSFVFCINIVLGNVSLRYIPVSFMQ-TIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTS 150 (340)
Q Consensus 82 ~~~~~~~~~~~~~~~~~al~~~~~~~~~-~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~ 150 (340)
.....+++..+..+...+++.+|.+++. +-.....+.+.+.++++++|+.+..+++++.++++|++..-
T Consensus 33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk 102 (106)
T COG2076 33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence 3444567788888889999999999854 55789999999999999999999999999999999997654
No 73
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.49 E-value=0.0013 Score=48.73 Aligned_cols=68 Identities=13% Similarity=0.125 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHhhhhhcccchhHHHHH-HHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeee
Q 019514 83 FPMSFVFCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTS 150 (340)
Q Consensus 83 ~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~ 150 (340)
....+++..+.++...+++.+|.+++..+ .....+.+.+.+++++||++++.+++++.++++|++...
T Consensus 33 ~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 33 IITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 34467778888888999999999985555 679999999999999999999999999999999998764
No 74
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.47 E-value=0.002 Score=48.05 Aligned_cols=68 Identities=15% Similarity=0.257 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHHHHhhhhhcccchhHHHH-HHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceee
Q 019514 82 IFPMSFVFCINIVLGNVSLRYIPVSFMQT-IKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLT 149 (340)
Q Consensus 82 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~-l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~ 149 (340)
.....+++....++...+++.+|.+++.. -.....+.+.+.+++++||+++..+++++.++++|++..
T Consensus 38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 34445667788888889999999998554 467899999999999999999999999999999999764
No 75
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.43 E-value=0.0016 Score=48.86 Aligned_cols=54 Identities=11% Similarity=0.275 Sum_probs=44.4
Q ss_pred HHHhccch-hHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHh
Q 019514 249 YVIHSTTA-VTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGY 302 (340)
Q Consensus 249 ~~~~~~~a-~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~ 302 (340)
..+++.+. ...++...+..+.+.+.|+++|||++|+.+++|+.+++.|++..+.
T Consensus 49 ~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 49 QTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 44566543 3445557778999999999999999999999999999999998764
No 76
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.32 E-value=0.0068 Score=45.26 Aligned_cols=53 Identities=15% Similarity=0.425 Sum_probs=44.1
Q ss_pred HHHhccc-hhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHH
Q 019514 249 YVIHSTT-AVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYG 301 (340)
Q Consensus 249 ~~~~~~~-a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~ 301 (340)
..+|+.+ .+..++......+.+.+.|+++|||++|+.+++|+.+++.|++..+
T Consensus 54 ~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 54 QAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 3355554 3456777888899999999999999999999999999999998754
No 77
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.22 E-value=0.0034 Score=46.59 Aligned_cols=54 Identities=11% Similarity=0.161 Sum_probs=45.5
Q ss_pred HHHhccc-hhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHh
Q 019514 249 YVIHSTT-AVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGY 302 (340)
Q Consensus 249 ~~~~~~~-a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~ 302 (340)
..+|+.+ .+..++...+..+.+.+.|+++|||++|+.+++|+.+++.|++..+.
T Consensus 48 ~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 48 WAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 3345554 45577888899999999999999999999999999999999988653
No 78
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.22 E-value=0.0039 Score=45.86 Aligned_cols=55 Identities=18% Similarity=0.285 Sum_probs=46.1
Q ss_pred HHHhccc-hhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhh
Q 019514 249 YVIHSTT-AVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYI 303 (340)
Q Consensus 249 ~~~~~~~-a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~ 303 (340)
..+|+.+ .+..++....-.+.+.+.|+++|||++|..+++|+.+++.|++..+..
T Consensus 49 ~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 49 LALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 3356654 345678888899999999999999999999999999999999987653
No 79
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=97.22 E-value=0.001 Score=57.51 Aligned_cols=132 Identities=14% Similarity=0.173 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHHH
Q 019514 160 GFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVL 239 (340)
Q Consensus 160 G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 239 (340)
|++.+++|+++++...|=.|+.-. + |+.-.+.++.....+.-.......+.+. +..+..++|.+
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~--g-Dg~~fQw~~~~~i~~~g~~v~~~~~~p~-------------f~p~amlgG~l 64 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDT--G-DGFFFQWVMCSGIFLVGLVVNLILGFPP-------------FYPWAMLGGAL 64 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccC--C-CcHHHHHHHHHHHHHHHHHHHHhcCCCc-------------ceeHHHhhhhh
Confidence 677889999999999988887543 2 5554444433322222222222222211 12355566666
Q ss_pred HHHHHHHHHHHHhccc-hhHHHHHhhhhhHHHhhhhhh-ccCcc-----cccchhhhhhHHhHhHHHHHhhhhhh
Q 019514 240 AFCLNFSIFYVIHSTT-AVTFNVAGNLKVAVAVLVSWL-IFRNP-----ISGMNAVGCAITLIGCTFYGYIRHLL 307 (340)
Q Consensus 240 ~~~~~~~~~~~~~~~~-a~~~s~~~~~~~v~~~l~~~~-~~~e~-----~s~~~~~G~~li~~g~~~~~~~~~~~ 307 (340)
....|....-.++..+ +.-..+.+..+.+.....|-+ +||++ -.+..++|.+++++|..+|..-+..+
T Consensus 65 W~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 65 WATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred hhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 6666666666667665 333455566677777776644 55543 25789999999999999998755433
No 80
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.12 E-value=0.0018 Score=56.04 Aligned_cols=75 Identities=16% Similarity=0.169 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhhh
Q 019514 231 IIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRH 305 (340)
Q Consensus 231 ~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~~ 305 (340)
+...+-+++-...|...+..+++.+|.+..+....+.+.+.++++++++++++..||.+..+...|+.+......
T Consensus 18 ~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~ 92 (244)
T PF04142_consen 18 LKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS 92 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence 444455556666677888889999999999999999999999999999999999999999999999998765443
No 81
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.06 E-value=0.03 Score=44.08 Aligned_cols=138 Identities=13% Similarity=0.113 Sum_probs=94.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHH
Q 019514 157 NMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSS 236 (340)
Q Consensus 157 ~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 236 (340)
.+...+..+.+.++-..+..+..++.+..+ +|..-.......+.+.+..+....+...... .....+ ++..+.
T Consensus 3 ~~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~~a--~~~~~p----wW~~~G 75 (150)
T COG3238 3 MYLYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGHPGLA--AVASAP----WWAWIG 75 (150)
T ss_pred cHHHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCchh--hccCCc----hHHHHc
Confidence 346678889999999999999888887543 5776667777777777777766644432222 223333 234455
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHhhh-hhHHHhhhhhhccC----cccccchhhhhhHHhHhHHHHH
Q 019514 237 GVLAFCLNFSIFYVIHSTTAVTFNVAGNL-KVAVAVLVSWLIFR----NPISGMNAVGCAITLIGCTFYG 301 (340)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~a~~~s~~~~~-~~v~~~l~~~~~~~----e~~s~~~~~G~~li~~g~~~~~ 301 (340)
|+++..+-........+.++++...+-.. +.+.+.+++.+=+. .++++..+.|.++++.|+.+..
T Consensus 76 G~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 76 GLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred cchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 67777776666677788877766655444 56677777665443 4689999999999999955543
No 82
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.03 E-value=0.0076 Score=43.81 Aligned_cols=58 Identities=9% Similarity=0.201 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHhhhhhcccchhHHHH-HHHHHHHHHHHHHHHHhhcccchhhhhhhhhh
Q 019514 85 MSFVFCINIVLGNVSLRYIPVSFMQT-IKSFTPATTVVLQWLVWRKYFDWRIWASLVPI 142 (340)
Q Consensus 85 ~~~~~~~~~~~~~~al~~~~~~~~~~-l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~ 142 (340)
...+++.+..+...+++.+|.+.+.. ......+.+.+.+.+++||+++..++.++.++
T Consensus 35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 34577888899999999999998655 56799999999999999999999999998764
No 83
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=96.97 E-value=0.015 Score=49.51 Aligned_cols=101 Identities=9% Similarity=0.138 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHHHHH-HHHHHHhhhhhcccchhHHHHHHHHHHHHHHHH
Q 019514 44 LSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVF-CINIVLGNVSLRYIPVSFMQTIKSFTPATTVVL 122 (340)
Q Consensus 44 ~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l 122 (340)
-.-+..-+.++.++..++-...... .+..-......+..+++. .+...+-..++...|..++.++.++.|.+.++.
T Consensus 177 ~~g~a~gm~vAaviv~Pig~~~ag~---~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~ 253 (292)
T COG5006 177 TAGVAVGMLVAALIVLPIGAAQAGP---ALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALS 253 (292)
T ss_pred chHHHHHHHHHHHHHhhhhhhhcch---hhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHH
Confidence 3445556666666655553322211 111111222333334444 455667778999999999999999999999999
Q ss_pred HHHHhhcccchhhhhhhhhhhhhce
Q 019514 123 QWLVWRKYFDWRIWASLVPIVGGIL 147 (340)
Q Consensus 123 ~~~~l~e~~~~~~~~~i~l~~~Gv~ 147 (340)
++++++|++|..||.++..++.+..
T Consensus 254 G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 254 GLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 9999999999999999998887765
No 84
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.95 E-value=0.037 Score=43.39 Aligned_cols=127 Identities=12% Similarity=0.136 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHHHHHHHHHHHhh
Q 019514 18 LQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGN 97 (340)
Q Consensus 18 ~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (340)
++-......+...|-.+-+. ...|+.-++.-+..+.+.+..+....++++....+ +.+|+ ....|++......+..
T Consensus 7 ~~aG~~i~~q~~~N~~L~~~--~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~-~~p~w-~~lGG~lG~~~V~~~~ 82 (138)
T PF04657_consen 7 LLAGALIALQAAFNGQLGKA--LGSPLVASFISFGVGFILLLIILLITGRPSLASLS-SVPWW-AYLGGLLGVFFVLSNI 82 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHH--hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhc-cCChH-HhccHHHHHHHHHHHH
Confidence 33344444455566666653 33489999999999999888877666654322222 22333 3347888888888889
Q ss_pred hhhcccchhHHHHHH-HHHHHHHHHHHHH----Hhhcccchhhhhhhhhhhhhcee
Q 019514 98 VSLRYIPVSFMQTIK-SFTPATTVVLQWL----VWRKYFDWRIWASLVPIVGGILL 148 (340)
Q Consensus 98 ~al~~~~~~~~~~l~-~~~pi~~~~l~~~----~l~e~~~~~~~~~i~l~~~Gv~i 148 (340)
+....++++....+. .-+.+...++..+ .-++++++.+..++.+.++|+.+
T Consensus 83 ~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 83 ILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 999999988777665 4445566666664 25788999999999999999864
No 85
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.79 E-value=0.018 Score=52.17 Aligned_cols=143 Identities=15% Similarity=0.087 Sum_probs=92.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHH--HHHHHHHH-hcccchhhhcccCCCchHHHHHH
Q 019514 157 NMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATM--ILSIPALL-LEGSGIMDWLSTHPSPWSAFIII 233 (340)
Q Consensus 157 ~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l 233 (340)
...|+++.+++++|++...+=.|+ .|+ -+++.. |. ..+.. ++.|+... ...+...+ +..+.+...+...
T Consensus 5 ~~~G~~~~~i~~~~~GS~~~p~K~-~k~---w~wE~~-W~-v~gi~~wl~~~~~~g~~~~~~f~~--~~~~~~~~~~~~~ 76 (345)
T PRK13499 5 IILGIIWHLIGGASSGSFYAPFKK-VKK---WSWETM-WS-VGGIFSWLILPWLIAALLLPDFWA--YYSSFSGSTLLPV 76 (345)
T ss_pred hHHHHHHHHHHHHHhhcccccccc-cCC---CchhHH-HH-HHHHHHHHHHHHHHHHHHhhhHHH--HHHhcCHHHHHHH
Confidence 357999999999999999998888 442 333333 33 21221 12221111 11111111 1122345567788
Q ss_pred HHHHHHHHHHHHHHHHHHhccchhH-HHHHhhhhhHHHhhhhhhccCccc---c----cchhhhhhHHhHhHHHHHhhhh
Q 019514 234 FSSGVLAFCLNFSIFYVIHSTTAVT-FNVAGNLKVAVAVLVSWLIFRNPI---S----GMNAVGCAITLIGCTFYGYIRH 305 (340)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~a~~-~s~~~~~~~v~~~l~~~~~~~e~~---s----~~~~~G~~li~~g~~~~~~~~~ 305 (340)
+++|++....+...+..+++.+... ..+...+..+..++++.+++||-. + ...++|.+++++|+.+..+...
T Consensus 77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~ 156 (345)
T PRK13499 77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ 156 (345)
T ss_pred HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 8888888888888888888886544 444566788899999999998643 3 3467799999999999887544
Q ss_pred hh
Q 019514 306 LL 307 (340)
Q Consensus 306 ~~ 307 (340)
++
T Consensus 157 ~k 158 (345)
T PRK13499 157 LK 158 (345)
T ss_pred hc
Confidence 33
No 86
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=96.74 E-value=0.031 Score=48.73 Aligned_cols=71 Identities=13% Similarity=0.166 Sum_probs=58.1
Q ss_pred chhhHHhHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhh----hhhhhhhhce
Q 019514 76 EDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWA----SLVPIVGGIL 147 (340)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~----~i~l~~~Gv~ 147 (340)
+..++. ...|+++..++.++..+.+..+.+++-.+.++.++...+.+.+++||+=+++++. +++++++|.+
T Consensus 193 k~~~~n-il~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 193 KKSWKN-ILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred cchHHh-hHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 334444 5568999999999999999999999999999999999999999999998888764 4444445543
No 87
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=96.70 E-value=0.01 Score=53.08 Aligned_cols=119 Identities=16% Similarity=0.162 Sum_probs=80.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHH
Q 019514 156 FNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFS 235 (340)
Q Consensus 156 ~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 235 (340)
....|+.+++.++++.+....++|+...+.+.++..--. . +.....+ ..|+.-+.
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~--~--------~~~~l~~---------------~~W~~G~~ 58 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGS--G--------GRSYLRR---------------PLWWIGLL 58 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc--h--------hhHHHhh---------------HHHHHHHH
Confidence 346799999999999999999999987542211110000 0 0000000 01222222
Q ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHh
Q 019514 236 SGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGY 302 (340)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~ 302 (340)
....+...+ +......++...+.++.+..++..+++.++++|+++...+.|..+++.|..+...
T Consensus 59 ~~~~g~~~~---~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~ 122 (300)
T PF05653_consen 59 LMVLGEILN---FVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI 122 (300)
T ss_pred HHhcchHHH---HHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence 223333333 3346777888899999999999999999999999999999999999999887543
No 88
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.39 E-value=0.12 Score=40.72 Aligned_cols=134 Identities=12% Similarity=0.140 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHHHHHHHHH
Q 019514 14 LLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINI 93 (340)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (340)
++....-........-.|-.+-. ..+.|+.-.+.-+.++.+.+..+.....+.+.....++.+|+.+ ..|++.....
T Consensus 7 ll~~i~aG~~l~~Q~~iN~qL~~--~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~-~GG~lGa~~v 83 (150)
T COG3238 7 LLFAILAGALLPLQAAINGRLAR--YLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAW-IGGLLGAIFV 83 (150)
T ss_pred HHHHHHHhhhhhhHHHHHHHHHH--HcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHH-Hccchhhhhh
Confidence 33444444445555666666666 34469999999999998888877666443433332334344444 4456666666
Q ss_pred HHhhhhhcccchhHHHHH-HHHHHHHHHHHHHHHh----hcccchhhhhhhhhhhhhceeee
Q 019514 94 VLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVW----RKYFDWRIWASLVPIVGGILLTS 150 (340)
Q Consensus 94 ~~~~~al~~~~~~~~~~l-~~~~pi~~~~l~~~~l----~e~~~~~~~~~i~l~~~Gv~i~~ 150 (340)
.........++++..+.+ .+-+-+..+++..+=. +++++..++.++++.++|+.+..
T Consensus 84 t~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 84 TSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred hhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 666667777877765554 4555666666666433 47789999999999999955543
No 89
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.37 E-value=0.01 Score=44.45 Aligned_cols=70 Identities=23% Similarity=0.295 Sum_probs=58.7
Q ss_pred hHHhHHHHHHHHHHHHHhhhhhcccchhHHHHH-HHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceee
Q 019514 79 WRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLT 149 (340)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~ 149 (340)
+++.+| -+++..+...+++.+...|.+.+..+ ++++-+++++.++++.+|..+++.+.|+.+++.|+.+.
T Consensus 42 ~~y~ip-f~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 42 PKYIIP-FLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 455555 35667777888999999999987766 69999999999998888888999999999999999874
No 90
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.30 E-value=0.087 Score=44.95 Aligned_cols=67 Identities=4% Similarity=0.034 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhcee
Q 019514 82 IFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILL 148 (340)
Q Consensus 82 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i 148 (340)
.....+.......+..+.++|.+..+..+...+.++++.+++.++++++++..++.|+.+.+.|+.+
T Consensus 155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 3344455667777888899999999999999999999999999999999999999999999999865
No 91
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=96.09 E-value=0.0018 Score=55.29 Aligned_cols=136 Identities=13% Similarity=0.206 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHH
Q 019514 159 FGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGV 238 (340)
Q Consensus 159 ~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 238 (340)
.|..+...+ ..+....+..++... .+|..+-....+.-.+...|..+.... +.. .+..-. ..++.=|+
T Consensus 38 ~gl~l~~vs-~ff~~~~vv~t~~~e---~~p~e~a~~r~l~~mlit~pcliy~~~-----~v~-gp~g~R--~~LiLRg~ 105 (346)
T KOG4510|consen 38 LGLLLLTVS-YFFNSCMVVSTKVLE---NDPMELASFRLLVRMLITYPCLIYYMQ-----PVI-GPEGKR--KWLILRGF 105 (346)
T ss_pred cCceehhhH-HHHhhHHHhhhhhhc---cChhHhhhhhhhhehhhhheEEEEEee-----eee-cCCCcE--EEEEeehh
Confidence 566677777 666666666666654 355555444422222222222211111 110 011100 12333444
Q ss_pred HHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhhhh
Q 019514 239 LAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHL 306 (340)
Q Consensus 239 ~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~~~ 306 (340)
.++...+..|+..++.+-..+.++....|+++++++|.+++|++|.....|..+.+.|+++..+.+..
T Consensus 106 mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFl 173 (346)
T KOG4510|consen 106 MGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFL 173 (346)
T ss_pred hhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcc
Confidence 55544455667778888888889999999999999999999999999999999999999987765543
No 92
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.02 E-value=0.26 Score=44.24 Aligned_cols=138 Identities=14% Similarity=0.165 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccC--CCChHHHHHHHHHHHHHHHHHHHHHhccc-------chhhhcccCCCchHHHH
Q 019514 161 FCAALFGCLATSTKTILAESLLHSY--KFDSINTVYYMAPFATMILSIPALLLEGS-------GIMDWLSTHPSPWSAFI 231 (340)
Q Consensus 161 ~~~~l~~~~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 231 (340)
.+..+...+-++......|+..+.+ ++.|.+.++..=..-.++.+.....-+.. +...+....+. . ..
T Consensus 17 ~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~--~-~l 93 (345)
T KOG2234|consen 17 YLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPR--E-TL 93 (345)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChH--H-HH
Confidence 3344444555555555666655432 46677776665554444333333322211 11111111110 1 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHH
Q 019514 232 IIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYG 301 (340)
Q Consensus 232 ~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~ 301 (340)
.+.+-.++-..-|...+....+.+|.+..+...++...+.+++++++++++++.||...++...|+.+..
T Consensus 94 k~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ 163 (345)
T KOG2234|consen 94 KVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ 163 (345)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 3333333433445566788999999999999999999999999999999999999999999999999866
No 93
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.71 E-value=0.036 Score=46.57 Aligned_cols=64 Identities=9% Similarity=0.059 Sum_probs=54.9
Q ss_pred HHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhhhhh
Q 019514 244 NFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLL 307 (340)
Q Consensus 244 ~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~~~~ 307 (340)
..+++.++++.+--+.-+-...+|+...++|+++.+.+.+|....-...++.|+.++.+++++.
T Consensus 99 MVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv 162 (337)
T KOG1580|consen 99 MVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKV 162 (337)
T ss_pred HHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcccccc
Confidence 3456777888887777788899999999999999999999999999999999999988765544
No 94
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.66 E-value=0.051 Score=39.46 Aligned_cols=46 Identities=15% Similarity=0.138 Sum_probs=25.1
Q ss_pred HHHHhccchhHH-HHHhhhhhHHHhhhhhhccCcccccchhhhhhHH
Q 019514 248 FYVIHSTTAVTF-NVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAIT 293 (340)
Q Consensus 248 ~~~~~~~~a~~~-s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li 293 (340)
...+|+.+...+ .+...+..+.+.+.|+++|||++|+.+++|+.++
T Consensus 47 ~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 47 SLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 445677655544 5667788999999999999999999999998875
No 95
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=95.66 E-value=0.019 Score=51.30 Aligned_cols=141 Identities=9% Similarity=0.012 Sum_probs=98.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhh--cCCCCchHHHHHHHHHHHHHHHH-HHHHHhhcCCC---CcCCcchhhHHhH
Q 019514 10 VFRSLLAILQWWVFNVTVIITNKWIFQ--KLDFKFPLSVSCIHFICSSIGAY-LVIKVLKLKPL---ITVEPEDRWRRIF 83 (340)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~k~~~~--~~~~~~p~~~~~~r~~~~~~~l~-~~~~~~~~~~~---~~~~~~~~~~~~~ 83 (340)
++.-...+..+......-....|.+++ +.+.+ +..+...+--++.+.++ ++......... ...++.-......
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILL 239 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHH
Confidence 455566777777777778888888885 34566 77777777667777776 54333222111 1112222233333
Q ss_pred HHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeec
Q 019514 84 PMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV 151 (340)
Q Consensus 84 ~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~ 151 (340)
..+++..+.+...+..+..+++=++++.....=+.+...++++++++.++.+.+|..+.++|+.+.+.
T Consensus 240 ~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 240 LNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR 307 (316)
T ss_pred HHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence 44566677777888889999999999998888888888888888888899999999999999887653
No 96
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=95.23 E-value=0.0085 Score=50.66 Aligned_cols=129 Identities=14% Similarity=0.109 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHHH
Q 019514 160 GFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVL 239 (340)
Q Consensus 160 G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 239 (340)
+++++++=++.|+.--....|... +|.+...-..+-+.++.+...++. .+ -.++..+..-+.+|.+
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~GG----~p~qQ~lGtT~GALifaiiv~~~~-~p---------~~T~~~~iv~~isG~~ 68 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKFGG----KPYQQTLGTTLGALIFAIIVFLFV-SP---------ELTLTIFIVGFISGAF 68 (288)
T ss_pred hHHHHHHHHHHhcccceeeeecCC----ChhHhhhhccHHHHHHHHHHheee-cC---------ccchhhHHHHHHhhhH
Confidence 567788888888887766665443 444443332222222223222221 11 1233446677788888
Q ss_pred HHHHHHHHHHHHhccchhHHHHH-hhhhhHHHhhhhhhccCcccccchhh----hhhHHhHhHHHHHh
Q 019514 240 AFCLNFSIFYVIHSTTAVTFNVA-GNLKVAVAVLVSWLIFRNPISGMNAV----GCAITLIGCTFYGY 302 (340)
Q Consensus 240 ~~~~~~~~~~~~~~~~a~~~s~~-~~~~~v~~~l~~~~~~~e~~s~~~~~----G~~li~~g~~~~~~ 302 (340)
...-+...+..++..+...+..+ +..+.+-+.++|++.|||-.+..+++ ..++++.|+.+..+
T Consensus 69 Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~ 136 (288)
T COG4975 69 WSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSK 136 (288)
T ss_pred hhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeee
Confidence 88888888888888877766655 45678999999999999998877654 56667777766544
No 97
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=95.00 E-value=0.19 Score=45.38 Aligned_cols=144 Identities=11% Similarity=0.027 Sum_probs=99.8
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcC--CCCchHHHHHHHHHHHHHHHHHHHHHhh-cCCCCcCCcchhhHHh
Q 019514 6 CTWSVFRSLLAILQWWVFNVTVIITNKWIFQKL--DFKFPLSVSCIHFICSSIGAYLVIKVLK-LKPLITVEPEDRWRRI 82 (340)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~p~~~~~~r~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~ 82 (340)
+..++...++.+++|.+-.... |+-.++. +.+-|.++.+.-.+--.++...++.+.. ..++...|...+....
T Consensus 245 ~llG~llaL~sA~~YavY~vll----k~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~v 320 (416)
T KOG2765|consen 245 PLLGNLLALLSALLYAVYTVLL----KRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLV 320 (416)
T ss_pred hhHHHHHHHHHHHHHHHHHHHH----HhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEee
Confidence 3455666777777776654444 7766654 4666777776665433333222221111 2344444545555555
Q ss_pred HHHHHHH-HHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeeccc
Q 019514 83 FPMSFVF-CINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE 153 (340)
Q Consensus 83 ~~~~~~~-~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~~ 153 (340)
+..++.. ...-+++.+|.-.++.-++++-.++++...++...++.++++++..++|...+++|.+++...+
T Consensus 321 v~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~ 392 (416)
T KOG2765|consen 321 VFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS 392 (416)
T ss_pred eHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence 5556554 6788899999999999899999999999999999999899999999999999999999887543
No 98
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=94.62 E-value=0.54 Score=41.36 Aligned_cols=137 Identities=16% Similarity=0.178 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcC-CCCcC--CcchhhHHhHHHHH
Q 019514 11 FRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLK-PLITV--EPEDRWRRIFPMSF 87 (340)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~ 87 (340)
..-+.+++.+..+=.......+.++.+++.+ ++.+.+.--+...+.-.......+.. +...+ ...+.++..+..+.
T Consensus 171 ~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s-~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~ 249 (327)
T KOG1581|consen 171 PIGILLLFGYLLFDGFTNATQDSLFKKYKVS-SLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST 249 (327)
T ss_pred hHhHHHHHHHHHHHhhHHhHHHHHhccCCcc-HhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH
Confidence 3445556666665555566667788876666 55555555554444444332222211 11111 12346788899999
Q ss_pred HHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhcee
Q 019514 88 VFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILL 148 (340)
Q Consensus 88 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i 148 (340)
+.+.++.+.++-++.-++=+..++..+-=++...++.+..+++++..||.++.+.+.|...
T Consensus 250 ~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 250 CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 9999999999998888888888999999999999999999999999999999988877643
No 99
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=92.32 E-value=4.9 Score=35.79 Aligned_cols=133 Identities=18% Similarity=0.193 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCChH-HHHHHHHHHHHHHHHHHHHH--hcccchhhhcccCCCchHHHHHHHHH
Q 019514 160 GFCAALFGCLATSTKTILAESLLHSYKFDSI-NTVYYMAPFATMILSIPALL--LEGSGIMDWLSTHPSPWSAFIIIFSS 236 (340)
Q Consensus 160 G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~ 236 (340)
....++..+++..+..+..|.....++++.. .++.+|++.+.+.....-.. .+.++. ++... --..-.
T Consensus 13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l-~~~~~--------kk~~P~ 83 (314)
T KOG1444|consen 13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPL-DLRTA--------KKWFPV 83 (314)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCc-ChHHH--------HHHccH
Confidence 4566777777888888888888877666543 34457887777665544332 111111 11111 111111
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHH
Q 019514 237 GVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYG 301 (340)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~ 301 (340)
.++-++..+.....+++.+.....++....++++.+...++++.+++...+.....+++|...+.
T Consensus 84 ~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~ 148 (314)
T KOG1444|consen 84 SLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAA 148 (314)
T ss_pred HHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhc
Confidence 12222223334556899999999999999999999999999999999999999999999888764
No 100
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=92.04 E-value=4.9 Score=36.25 Aligned_cols=144 Identities=17% Similarity=0.157 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHH-HhcccchhhhcccCCCchHHHHHHHHH
Q 019514 158 MFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPAL-LLEGSGIMDWLSTHPSPWSAFIIIFSS 236 (340)
Q Consensus 158 ~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~ 236 (340)
..|+++..+++++.+...+=.||.. +-+..+....+.+++-++ .|... ...-++..+.....+. ..++.....
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkvk---~WsWEs~Wlv~gi~swli-~P~~~a~l~ip~~~~i~~~~~~--~~l~~~~l~ 79 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKVK---GWSWESYWLVQGIFSWLI-VPWLWALLAIPDFFSIYSATPA--STLFWTFLF 79 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhcC---CccHHHHHHHHHHHHHHH-HHHHHHHHhCCcHHHHHHhCCh--hHHHHHHHH
Confidence 4799999999999999998888863 344444445555554443 33333 2333333333222221 234444444
Q ss_pred HHHHHHHHHHHHHHHhccc-hhHHHHHhhhhhHHHhhhhhhccC-------cccccchhhhhhHHhHhHHHHHhhhhhh
Q 019514 237 GVLAFCLNFSIFYVIHSTT-AVTFNVAGNLKVAVAVLVSWLIFR-------NPISGMNAVGCAITLIGCTFYGYIRHLL 307 (340)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~-a~~~s~~~~~~~v~~~l~~~~~~~-------e~~s~~~~~G~~li~~g~~~~~~~~~~~ 307 (340)
|++.-.-+...-..+++.+ +...++.-.+-.++..++--++.| ++-....++|.+++++|+.+..+....+
T Consensus 80 G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~K 158 (344)
T PF06379_consen 80 GVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMK 158 (344)
T ss_pred HHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhh
Confidence 4443333332223345553 233334333344444444333322 2234567889999999999988765443
No 101
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=89.48 E-value=0.71 Score=34.64 Aligned_cols=49 Identities=24% Similarity=0.356 Sum_probs=38.4
Q ss_pred HhccchhHHH-HHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHH
Q 019514 251 IHSTTAVTFN-VAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTF 299 (340)
Q Consensus 251 ~~~~~a~~~s-~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~ 299 (340)
+.+.+-..+. +.+.+.-+++.+.++++.+|..+...++|+++++.|+.+
T Consensus 62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 4555444333 447888999999999988888899999999999999753
No 102
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=88.80 E-value=18 Score=32.78 Aligned_cols=225 Identities=12% Similarity=0.079 Sum_probs=123.4
Q ss_pred chhhHHhHHHHHHHHHHHHHhhhhhcccchhHHHH-HHHHHHHHHHHHHHHHhhc-------ccchhhhhhhhhhhhhce
Q 019514 76 EDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQT-IKSFTPATTVVLQWLVWRK-------YFDWRIWASLVPIVGGIL 147 (340)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~-l~~~~pi~~~~l~~~~l~e-------~~~~~~~~~i~l~~~Gv~ 147 (340)
.+........|++.+.+...+-.+.+|++.+..+- ...++.++-.++-.++.++ +-....++++++.++|+.
T Consensus 70 ~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIa 149 (344)
T PF06379_consen 70 ASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIA 149 (344)
T ss_pred hhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHH
Confidence 34566667778888888888889999998886443 3456655555555555432 223456889999999999
Q ss_pred eeeccc-----------ccch-HHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCChHHHHH--H--HHHHHHHHHH
Q 019514 148 LTSVTE-----------LSFN-MFGFCAALFGCLATSTKTILAESLLH------SYKFDSINTVY--Y--MAPFATMILS 205 (340)
Q Consensus 148 i~~~~~-----------~~~~-~~G~~~~l~~~~~~a~~~v~~~~~~~------~~~~~~~~~~~--~--~~~~~~~~~~ 205 (340)
+..... .+++ ..|.++++.+.+.+|..+.-.+.-.. ..+.++..... | ...-+++.-+
T Consensus 150 i~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~ 229 (344)
T PF06379_consen 150 ICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNL 229 (344)
T ss_pred HHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHH
Confidence 875321 1122 46999999999998888776554321 11223322110 1 0111112222
Q ss_pred HHHHHhcc--cchhhhcccC--CCc-hHHHHHHHHHHHHHHHHHHHHHHHHhc----cchhHHHHHhhhhhHHHhhhhhh
Q 019514 206 IPALLLEG--SGIMDWLSTH--PSP-WSAFIIIFSSGVLAFCLNFSIFYVIHS----TTAVTFNVAGNLKVAVAVLVSWL 276 (340)
Q Consensus 206 ~~~~~~~~--~~~~~~~~~~--~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~a~~~s~~~~~~~v~~~l~~~~ 276 (340)
...+.... .+...+.+.. ... ..-+...+..|+..+...+.+-..-.+ .+.....+.+.+..+++-+.|.+
T Consensus 230 ~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~ 309 (344)
T PF06379_consen 230 IYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLI 309 (344)
T ss_pred HHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHH
Confidence 22222110 0110001111 111 122344444555555443333222233 34566777788888888888877
Q ss_pred ccCcc------cccchhhhhhHHhHhHHHHH
Q 019514 277 IFRNP------ISGMNAVGCAITLIGCTFYG 301 (340)
Q Consensus 277 ~~~e~------~s~~~~~G~~li~~g~~~~~ 301 (340)
. +|- .-..-+.|+.+++.++.+..
T Consensus 310 l-kEWKg~s~kt~~vl~~G~~vlI~s~~ivG 339 (344)
T PF06379_consen 310 L-KEWKGASKKTIRVLVLGIAVLILSVVIVG 339 (344)
T ss_pred H-HHhccCCcccHHHHHHHHHHHHHHHHHHh
Confidence 4 552 22344678888888777654
No 103
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.73 E-value=0.15 Score=45.18 Aligned_cols=121 Identities=16% Similarity=0.227 Sum_probs=82.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHH
Q 019514 156 FNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFS 235 (340)
Q Consensus 156 ~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 235 (340)
.+..|..+++.+.+..+....+.||..++.. .. .- ..+.+...+.. . ..|+.-++
T Consensus 18 d~~~G~~LaissS~~Ig~sfilkKkgl~r~~--~~---~~---------------ra~~gg~~yl~----~-~~Ww~G~l 72 (335)
T KOG2922|consen 18 DNIIGLVLAISSSIFIGSSFILKKKGLKRAG--AS---GL---------------RAGEGGYGYLK----E-PLWWAGML 72 (335)
T ss_pred CceeeeeehhhccEEEeeehhhhHHHHHHHh--hh---cc---------------cccCCCcchhh----h-HHHHHHHH
Confidence 4457888888888888888888888776321 10 00 00111111110 1 23555555
Q ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhh
Q 019514 236 SGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIR 304 (340)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~ 304 (340)
....+=..|+.. ....++.-.+.++.+..+.+.+++..+++|++++...+|++++++|......+.
T Consensus 73 tm~vGei~NFaA---YaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ha 138 (335)
T KOG2922|consen 73 TMIVGEIANFAA---YAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHA 138 (335)
T ss_pred HHHHHhHhhHHH---HhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEec
Confidence 555555555544 566788888888999999999999999999999999999999999988765444
No 104
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=87.47 E-value=0.96 Score=39.85 Aligned_cols=134 Identities=13% Similarity=0.122 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHH-HHHHHhcccc-----hhh-hcccCCCchHHHHHHHHHH
Q 019514 165 LFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILS-IPALLLEGSG-----IMD-WLSTHPSPWSAFIIIFSSG 237 (340)
Q Consensus 165 l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~l~~~~ 237 (340)
+++.+|++..-...|-.-|+-+.+.. .++-..++.++.. ++++-.+..+ -.+ +.+..+.++..+...+.+|
T Consensus 2 ~itmlcwGSW~nt~kL~~r~gR~~qh--~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG 79 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRGRLPQH--FYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG 79 (336)
T ss_pred eeehhhhcChHHHHHHHHhcCCccce--ehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence 45667777777776666553233322 3333333333322 2222221111 111 1233445655667777777
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHH-hhhhhHHHhhhhhhccCcccc--cchhhhhhHHhHhHHHHH
Q 019514 238 VLAFCLNFSIFYVIHSTTAVTFNVA-GNLKVAVAVLVSWLIFRNPIS--GMNAVGCAITLIGCTFYG 301 (340)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~a~~~s~~-~~~~~v~~~l~~~~~~~e~~s--~~~~~G~~li~~g~~~~~ 301 (340)
++--+.|+...+.+...+-..+-++ ..+.-+..+.+.++. +.+.+ ..-+.|..++++++++-.
T Consensus 80 vvfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfl-d~~~n~a~iLF~GV~cf~iAI~lga 145 (336)
T PF07168_consen 80 VVFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFL-DPKINRAEILFPGVACFLIAIILGA 145 (336)
T ss_pred HhhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeec-cCCCCCceEEEccHHHHHHHHHHHH
Confidence 7777777776666555543221111 111223333333332 34443 355668888888877644
No 105
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=84.61 E-value=0.42 Score=39.25 Aligned_cols=62 Identities=10% Similarity=0.224 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHh
Q 019514 241 FCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGY 302 (340)
Q Consensus 241 ~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~ 302 (340)
.+.|+.+...+++.+|+.++-+...+..+..+++++.+++++....++..++.+.|+.+..+
T Consensus 64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay 125 (290)
T KOG4314|consen 64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAY 125 (290)
T ss_pred ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEe
Confidence 34566667778999999999999999999999999999999999999999999888876553
No 106
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=83.94 E-value=13 Score=31.51 Aligned_cols=67 Identities=4% Similarity=-0.053 Sum_probs=55.0
Q ss_pred hHHhHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhh
Q 019514 79 WRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGG 145 (340)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~G 145 (340)
....+..|++-.+-.++.-|.++-++..+++++.++.-...++-+.+++++..++..+.++.+++..
T Consensus 224 l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGfls 290 (309)
T COG5070 224 LMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLS 290 (309)
T ss_pred HHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHH
Confidence 4456677788888888888999999999999999999888889899999998888887776655443
No 107
>PRK02237 hypothetical protein; Provisional
Probab=82.98 E-value=15 Score=27.13 Aligned_cols=48 Identities=23% Similarity=0.339 Sum_probs=40.4
Q ss_pred hHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhh
Q 019514 257 VTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIR 304 (340)
Q Consensus 257 ~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~ 304 (340)
-..+..+..-.+.+.++++.+-|++|+...++|..++++|+.+....+
T Consensus 60 RvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 60 RVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 345666777889999999999999999999999999999998765433
No 108
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=82.26 E-value=8.4 Score=28.38 Aligned_cols=47 Identities=19% Similarity=0.378 Sum_probs=40.2
Q ss_pred HHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhh
Q 019514 258 TFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIR 304 (340)
Q Consensus 258 ~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~ 304 (340)
..+..+..-.+.+.++++.+-+++|+...++|..+++.|+.+....+
T Consensus 59 vYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 59 VYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred HHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 45666777899999999999999999999999999999998765433
No 109
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=79.38 E-value=65 Score=31.45 Aligned_cols=49 Identities=10% Similarity=-0.101 Sum_probs=23.5
Q ss_pred hccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHH
Q 019514 252 HSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFY 300 (340)
Q Consensus 252 ~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~ 300 (340)
.|..+....+.....++-+.+.|.+.-.-..+....++.++.+++..+.
T Consensus 342 GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 342 GRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 3334444455555567777777776533333323333333333443433
No 110
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=79.28 E-value=0.6 Score=40.43 Aligned_cols=96 Identities=9% Similarity=0.081 Sum_probs=0.0
Q ss_pred cccchhHHHHHHHHHHHHHHHHHH-HHhhcc-cchhhhhhhhhhhhhceeeeccc--ccchHHHHHHHHHHHHHHHHHHH
Q 019514 101 RYIPVSFMQTIKSFTPATTVVLQW-LVWRKY-FDWRIWASLVPIVGGILLTSVTE--LSFNMFGFCAALFGCLATSTKTI 176 (340)
Q Consensus 101 ~~~~~~~~~~l~~~~pi~~~~l~~-~~l~e~-~~~~~~~~i~l~~~Gv~i~~~~~--~~~~~~G~~~~l~~~~~~a~~~v 176 (340)
+-.+-+...++.++..+.+.++-. +++||| +-+.-.+|++++.+-..+...-. .+.-+.|+++.++++...-.-..
T Consensus 45 sd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l~l~~lLaL~vW~ 124 (381)
T PF05297_consen 45 SDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVILFLCCLLALGVWF 124 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 334445556677766655544443 335555 46888888888887777665543 33445676555444433322223
Q ss_pred HHHHHhccCCCChHHHHHHHH
Q 019514 177 LAESLLHSYKFDSINTVYYMA 197 (340)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~ 197 (340)
| -.++++++.+.++++.+..
T Consensus 125 Y-m~lLr~~GAs~WtiLaFcL 144 (381)
T PF05297_consen 125 Y-MWLLRELGASFWTILAFCL 144 (381)
T ss_dssp ---------------------
T ss_pred H-HHHHHHhhhHHHHHHHHHH
Confidence 3 2356666778888776543
No 111
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=77.46 E-value=46 Score=29.01 Aligned_cols=102 Identities=9% Similarity=0.005 Sum_probs=68.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCcchhhHHhHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHH-
Q 019514 42 FPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTV- 120 (340)
Q Consensus 42 ~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~- 120 (340)
.+++..+.......+.-++....++ .+ .......+.|.+.+.++.+..-..+.++.+....+-++.-+.+-
T Consensus 26 Dg~~fQw~~~~~i~~~g~~v~~~~~-~p-------~f~p~amlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw 97 (254)
T PF07857_consen 26 DGFFFQWVMCSGIFLVGLVVNLILG-FP-------PFYPWAMLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGW 97 (254)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhcC-CC-------cceeHHHhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHH
Confidence 3888888887777766666544322 21 12344566688899999999999999999999999777554443
Q ss_pred HHHHH-Hhh---ccc--chhhhhhhhhhhhhceeeec
Q 019514 121 VLQWL-VWR---KYF--DWRIWASLVPIVGGILLTSV 151 (340)
Q Consensus 121 ~l~~~-~l~---e~~--~~~~~~~i~l~~~Gv~i~~~ 151 (340)
..+.+ +++ |.+ +...++|+++.++|..+...
T Consensus 98 ~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~f 134 (254)
T PF07857_consen 98 ASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSF 134 (254)
T ss_pred HHhhceeccccccccchhHHHHHHHHHHHHHHHheee
Confidence 32322 232 222 35567888888888877543
No 112
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=75.21 E-value=30 Score=25.46 Aligned_cols=55 Identities=9% Similarity=0.232 Sum_probs=36.0
Q ss_pred HhhhhhcccchhHHHHHH-HHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceee
Q 019514 95 LGNVSLRYIPVSFMQTIK-SFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLT 149 (340)
Q Consensus 95 ~~~~al~~~~~~~~~~l~-~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~ 149 (340)
..-.|.+..+.+---+++ ..+...-+.++.+++||++++.+..|-+++++++..+
T Consensus 51 ANRiG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 51 ANRIGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred chhhhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 334455554544434443 2233334566788999999999999999988887553
No 113
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=74.23 E-value=4 Score=29.90 Aligned_cols=71 Identities=21% Similarity=0.190 Sum_probs=52.9
Q ss_pred hhHHhHHHHHHHHHHHHHhhhhhcccchhHHH-HHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceee
Q 019514 78 RWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQ-TIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLT 149 (340)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~ 149 (340)
.|++..|. ++.-.+...++.-++..|.+.+. +-++++-.|+++.+..+..|....+.+.+..+.+.|..+.
T Consensus 52 ~w~Y~iPF-llNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 52 NWEYLIPF-LLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred hHHHHHHH-HHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 35555564 44455566778888888887654 4467888999999998777777888899999999998654
No 114
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=69.84 E-value=50 Score=25.62 Aligned_cols=37 Identities=11% Similarity=0.071 Sum_probs=20.1
Q ss_pred hhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhh
Q 019514 266 KVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYI 303 (340)
Q Consensus 266 ~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~ 303 (340)
|-++-+++|.+.+++ --...++|..+...|+.....+
T Consensus 70 RGlfyif~G~l~~~~-~~~~~i~g~~~~~~G~~~i~l~ 106 (136)
T PF08507_consen 70 RGLFYIFLGTLCLGQ-SILSIIIGLLLFLVGVIYIILG 106 (136)
T ss_pred HHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHH
Confidence 344555566666665 2233445666666776644433
No 115
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=69.16 E-value=8.8 Score=33.67 Aligned_cols=55 Identities=18% Similarity=0.290 Sum_probs=47.8
Q ss_pred HHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHh
Q 019514 248 FYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGY 302 (340)
Q Consensus 248 ~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~ 302 (340)
+..+..++|.........-.+++-+++.-+++.+++..||.|+..+..|......
T Consensus 104 ~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~ 158 (372)
T KOG3912|consen 104 YVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGS 158 (372)
T ss_pred HHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeee
Confidence 4446777888888888888999999999999999999999999999999887543
No 116
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=69.07 E-value=3 Score=30.57 Aligned_cols=29 Identities=14% Similarity=0.022 Sum_probs=24.5
Q ss_pred hhhhhhccCcccccchhhhhhHHhHhHHH
Q 019514 271 VLVSWLIFRNPISGMNAVGCAITLIGCTF 299 (340)
Q Consensus 271 ~l~~~~~~~e~~s~~~~~G~~li~~g~~~ 299 (340)
..+++++++|++++.++.|.++++.++..
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 35678899999999999999999887653
No 117
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=68.05 E-value=27 Score=30.70 Aligned_cols=120 Identities=8% Similarity=-0.045 Sum_probs=76.1
Q ss_pred HHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCC----CcCCcchhhHHhHHHHHHHHHHHHHhhhhhcccc
Q 019514 29 ITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPL----ITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIP 104 (340)
Q Consensus 29 ~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~ 104 (340)
...|..+.. --+.-|.++++.-+.+.++.++...+.+..+. +..+..+.|....+.|++.....+...+=.+.++
T Consensus 202 iytkk~l~~-v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TS 280 (347)
T KOG1442|consen 202 IYTKKVLPP-VGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTS 280 (347)
T ss_pred Hhhheeccc-ccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEEEEecc
Confidence 344444432 23346788888888888888877666554322 2222333455555556666665655555566666
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceee
Q 019514 105 VSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLT 149 (340)
Q Consensus 105 ~~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~ 149 (340)
+=+..+-.+.--..=.+++..+++|.-+..+|-+-.+.++|....
T Consensus 281 plThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~Y 325 (347)
T KOG1442|consen 281 PLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAY 325 (347)
T ss_pred cceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHH
Confidence 555555555455555677888999999999999888887776543
No 118
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=62.75 E-value=2.1 Score=36.89 Aligned_cols=61 Identities=13% Similarity=0.329 Sum_probs=51.4
Q ss_pred HHHHHHHHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhh
Q 019514 243 LNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYI 303 (340)
Q Consensus 243 ~~~~~~~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~ 303 (340)
.|+....+.++++-+....+..-..+...+++|++++.+..+.++.|.++++.|+.+....
T Consensus 91 aNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~s 151 (336)
T KOG2766|consen 91 ANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFS 151 (336)
T ss_pred ccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEe
Confidence 3444445568888888899999999999999999999999999999999999998876543
No 119
>PF11139 DUF2910: Protein of unknown function (DUF2910); InterPro: IPR021315 Some members in this bacterial family annotate the proteins as cytochrome C biogenesis proteins however this cannot be confirmed. Currently no function for this family is known.
Probab=57.00 E-value=1.2e+02 Score=25.53 Aligned_cols=47 Identities=6% Similarity=0.075 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcC
Q 019514 22 VFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLK 68 (340)
Q Consensus 22 ~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~ 68 (340)
..+......-....++.+...+......|...+.+++..-.+..+++
T Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lGv~ll~~a~~~~~~~ 90 (214)
T PF11139_consen 44 AVGLVLLFGLDALPSGSSSAPSPVVGWLQLVLGVLLLLLAVRVWRRR 90 (214)
T ss_pred HHHHHHHHHHHhhccccccCCccHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 33333333444444322222367888888888887766555444433
No 120
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=55.22 E-value=2.6e+02 Score=28.89 Aligned_cols=44 Identities=11% Similarity=0.064 Sum_probs=31.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceee
Q 019514 106 SFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLT 149 (340)
Q Consensus 106 ~~~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~ 149 (340)
+-+.++..+.|+-++.++.....+|.+...+.+.+..++|.+-+
T Consensus 11 gRa~il~~l~PFg~af~~a~~~~~~~~~~~~~~~~~~~~G~~t~ 54 (764)
T TIGR02865 11 GRAVIVSPMAPFGIAFLAAVLLAKKGGDKAFFSALGVLLGAISI 54 (764)
T ss_pred hHHHHhcCCCchHHHHHHHHHHhhcccchHHHHHHHHHHHHHHh
Confidence 34467888899999999998877776555566666666666543
No 121
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=55.14 E-value=1.2e+02 Score=29.09 Aligned_cols=24 Identities=4% Similarity=-0.111 Sum_probs=19.4
Q ss_pred cccchhhhhhHHhHhHHHHHhhhh
Q 019514 282 ISGMNAVGCAITLIGCTFYGYIRH 305 (340)
Q Consensus 282 ~s~~~~~G~~li~~g~~~~~~~~~ 305 (340)
++..|++++.++++|++++.+.++
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~~~ 277 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILAPK 277 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhc
Confidence 788999999999999877755443
No 122
>PRK15432 autoinducer 2 ABC transporter permease LsrC; Provisional
Probab=52.93 E-value=28 Score=31.86 Aligned_cols=24 Identities=17% Similarity=0.020 Sum_probs=14.7
Q ss_pred ccchhhhhhHHhHhHHHHHhhhhh
Q 019514 283 SGMNAVGCAITLIGCTFYGYIRHL 306 (340)
Q Consensus 283 s~~~~~G~~li~~g~~~~~~~~~~ 306 (340)
.+..++..++++..+.+....+++
T Consensus 287 ~~~~ii~g~lll~vl~~~~~~~~~ 310 (344)
T PRK15432 287 WWNDFIAGLVLLGVLVFDGRLRCA 310 (344)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHh
Confidence 466677777776666665544433
No 123
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=52.66 E-value=2.5e+02 Score=28.00 Aligned_cols=45 Identities=4% Similarity=-0.037 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhc--CCCCchHHHHHHHHHHHHHHHHH
Q 019514 16 AILQWWVFNVTVIITNKWIFQK--LDFKFPLSVSCIHFICSSIGAYL 60 (340)
Q Consensus 16 ~~~~~~~~~~~~~~~~k~~~~~--~~~~~p~~~~~~r~~~~~~~l~~ 60 (340)
...+.++.+..+.++-=..-.+ +.++.|-.+..+-.....+..+.
T Consensus 242 IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~ 288 (599)
T PF06609_consen 242 IGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFV 288 (599)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHH
Confidence 4555555555555443333332 35666666654444444433333
No 124
>PRK02935 hypothetical protein; Provisional
Probab=50.32 E-value=69 Score=23.56 Aligned_cols=30 Identities=13% Similarity=0.156 Sum_probs=20.7
Q ss_pred ccchhhhhhHHhHhHHHHHhhhhhhhCCCC
Q 019514 283 SGMNAVGCAITLIGCTFYGYIRHLLSQQPP 312 (340)
Q Consensus 283 s~~~~~G~~li~~g~~~~~~~~~~~~~~~~ 312 (340)
+...++|.+.++.+..+|-|......+..+
T Consensus 41 ~ifm~~G~l~~l~S~vvYFwiGmlStkavq 70 (110)
T PRK02935 41 TIFMLLGFLAVIASTVVYFWIGMLSTKAVQ 70 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccee
Confidence 445567888888888888877655544443
No 125
>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=47.57 E-value=28 Score=28.00 Aligned_cols=7 Identities=43% Similarity=0.733 Sum_probs=3.2
Q ss_pred ccccccc
Q 019514 325 LMELLPL 331 (340)
Q Consensus 325 ~~~~~~~ 331 (340)
..|..|+
T Consensus 138 ~~Em~pL 144 (163)
T PF06679_consen 138 NVEMAPL 144 (163)
T ss_pred cceeccc
Confidence 3444444
No 126
>PRK02237 hypothetical protein; Provisional
Probab=46.24 E-value=94 Score=23.07 Aligned_cols=44 Identities=14% Similarity=0.131 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeec
Q 019514 108 MQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV 151 (340)
Q Consensus 108 ~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~ 151 (340)
+..=....++...+-.+.+.|+||++..+++..++++|+.++.+
T Consensus 62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 33444555666667788899999999999999999999977643
No 127
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=45.21 E-value=2.8e+02 Score=26.43 Aligned_cols=20 Identities=30% Similarity=0.194 Sum_probs=8.8
Q ss_pred hHHHHHhhhhhHHHhhhhhh
Q 019514 257 VTFNVAGNLKVAVAVLVSWL 276 (340)
Q Consensus 257 ~~~s~~~~~~~v~~~l~~~~ 276 (340)
...++.+....+...+.+++
T Consensus 383 ~~~g~~~~~g~lg~~i~~~l 402 (476)
T PLN00028 383 VISGLTGAGGNVGAVLTQLL 402 (476)
T ss_pred hhhhhhhccccHHHHHHHHH
Confidence 33444444444444444444
No 128
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=44.05 E-value=71 Score=23.64 Aligned_cols=45 Identities=13% Similarity=0.156 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeecc
Q 019514 108 MQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT 152 (340)
Q Consensus 108 ~~~l~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~ 152 (340)
+..=...-++...+-.+.+.|+||++..+++..++++|+.++.+.
T Consensus 60 YAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 60 YAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred HHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 334445556667777888999999999999999999999876543
No 129
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=43.20 E-value=78 Score=23.29 Aligned_cols=45 Identities=18% Similarity=0.297 Sum_probs=37.0
Q ss_pred HHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhh
Q 019514 259 FNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYI 303 (340)
Q Consensus 259 ~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~ 303 (340)
.+-.+..-.+.+.++.++.=+..|+...++|.++.+.|+.+....
T Consensus 61 YAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 61 YAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred HHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 445566778888899999989999999999999999997765544
No 130
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=43.03 E-value=1.4e+02 Score=26.31 Aligned_cols=131 Identities=13% Similarity=0.086 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccCCCchHHHHHHHHHHHHHHHHHHHHH
Q 019514 169 LATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIF 248 (340)
Q Consensus 169 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 248 (340)
+.|-.|..+++.+.+..+++|..= |..++.......+.+. |-..+.+-. --.+|.....+....+...+. +.
T Consensus 53 f~Yl~yGy~qElif~~~gfkp~GW--ylTlvQf~~Ysg~gli-e~~~~~~k~--r~iP~rtY~~la~~t~gtmGL---sn 124 (367)
T KOG1582|consen 53 FLYLVYGYLQELIFNVEGFKPFGW--YLTLVQFLVYSGFGLI-ELQLIQTKR--RVIPWRTYVILAFLTVGTMGL---SN 124 (367)
T ss_pred HHHHHHHHHHHHHhccccCcccch--HHHHHHHHHHHhhhhe-EEEeecccc--eecchhHhhhhHhhhhhcccc---Cc
Confidence 466778888999887767775431 1222333333333332 211111100 011222233222222222111 11
Q ss_pred HHHhccchhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhhhhh
Q 019514 249 YVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLL 307 (340)
Q Consensus 249 ~~~~~~~a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~~~~ 307 (340)
..+.+.+--+--+....+.+...+.|.++-|.+..+..++...++.+|.++++....+.
T Consensus 125 ~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~ 183 (367)
T KOG1582|consen 125 GSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQT 183 (367)
T ss_pred CccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhccccc
Confidence 12333333344566777888888999999999999999999999999999998765543
No 131
>PRK09412 anaerobic C4-dicarboxylate transporter; Reviewed
Probab=42.59 E-value=2.5e+02 Score=26.74 Aligned_cols=12 Identities=17% Similarity=0.177 Sum_probs=6.6
Q ss_pred HHHHHHHhhccc
Q 019514 120 VVLQWLVWRKYF 131 (340)
Q Consensus 120 ~~l~~~~l~e~~ 131 (340)
.+++.++.+-|.
T Consensus 8 ~~~~~~~~g~~~ 19 (433)
T PRK09412 8 IVLLAIFLGARL 19 (433)
T ss_pred HHHHHHHHhHhh
Confidence 345555666555
No 132
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=41.75 E-value=2.1e+02 Score=23.94 Aligned_cols=10 Identities=10% Similarity=0.265 Sum_probs=5.6
Q ss_pred HHHhhcccch
Q 019514 124 WLVWRKYFDW 133 (340)
Q Consensus 124 ~~~l~e~~~~ 133 (340)
..++++|++.
T Consensus 194 ~~~lkkk~~i 203 (206)
T PF06570_consen 194 RFYLKKKYNI 203 (206)
T ss_pred HHHHHHHhCC
Confidence 3456666653
No 133
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.36 E-value=1.7e+02 Score=21.84 Aligned_cols=36 Identities=14% Similarity=0.178 Sum_probs=17.3
Q ss_pred hHHHhhhhhhccCc-ccccchhhhhhHHhHhHHHHHh
Q 019514 267 VAVAVLVSWLIFRN-PISGMNAVGCAITLIGCTFYGY 302 (340)
Q Consensus 267 ~v~~~l~~~~~~~e-~~s~~~~~G~~li~~g~~~~~~ 302 (340)
.++...+||+.=+- .-+++.++++.++-.|.-..+.
T Consensus 56 ilVGa~iG~llD~~agTsPwglIv~lllGf~AG~lnv 92 (116)
T COG5336 56 ILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVLNV 92 (116)
T ss_pred HHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 34455566654221 1355555555555444444443
No 134
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=35.42 E-value=2.6e+02 Score=23.27 Aligned_cols=30 Identities=10% Similarity=0.252 Sum_probs=18.4
Q ss_pred hhhhhccCcccccchhhhhhHHhH--hHHHHH
Q 019514 272 LVSWLIFRNPISGMNAVGCAITLI--GCTFYG 301 (340)
Q Consensus 272 l~~~~~~~e~~s~~~~~G~~li~~--g~~~~~ 301 (340)
-+|..+|++..=+....|..+.+. |.+...
T Consensus 134 ~iG~~L~t~y~l~fe~~silLLvAmIGAI~La 165 (198)
T PRK06638 134 AIGILLFTDYLLPFELASVLLLVAMVGAIVLA 165 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 346667777766777777766543 444444
No 135
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=35.35 E-value=50 Score=22.04 Aligned_cols=22 Identities=18% Similarity=0.315 Sum_probs=16.2
Q ss_pred hhhhhhHHhHhHHHHHhhhhhh
Q 019514 286 NAVGCAITLIGCTFYGYIRHLL 307 (340)
Q Consensus 286 ~~~G~~li~~g~~~~~~~~~~~ 307 (340)
-++++.++++|.++|....+++
T Consensus 6 iLi~ICVaii~lIlY~iYnr~~ 27 (68)
T PF05961_consen 6 ILIIICVAIIGLILYGIYNRKK 27 (68)
T ss_pred HHHHHHHHHHHHHHHHHHhccc
Confidence 3567788888999998766544
No 136
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=35.01 E-value=1.3e+02 Score=22.96 Aligned_cols=52 Identities=12% Similarity=0.090 Sum_probs=37.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHH
Q 019514 8 WSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYL 60 (340)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~ 60 (340)
+..++++++++++.+++++..++-|.+...+ -+||+|++-+--.....+.+.
T Consensus 53 ke~~~L~v~~vv~V~s~v~N~VL~K~~~~~m-~NY~fFL~QlTt~gyvpIffa 104 (130)
T PF08627_consen 53 KENFKLLVYVVVYVVSGVINRVLYKKMTNPM-KNYPFFLNQLTTFGYVPIFFA 104 (130)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccchHHHHHhcccceehHHHH
Confidence 4578889999999999999999999888853 356888776654444444333
No 137
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=34.26 E-value=4.1e+02 Score=25.11 Aligned_cols=12 Identities=8% Similarity=-0.036 Sum_probs=4.9
Q ss_pred hhhhhHHhHhHH
Q 019514 287 AVGCAITLIGCT 298 (340)
Q Consensus 287 ~~G~~li~~g~~ 298 (340)
+++.++.+++.+
T Consensus 404 ~~~~~~~li~~~ 415 (455)
T TIGR00892 404 YASGSIVVSAGL 415 (455)
T ss_pred HHhhHHHHHHHH
Confidence 443344444433
No 138
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=34.07 E-value=4.6e+02 Score=25.64 Aligned_cols=78 Identities=10% Similarity=-0.039 Sum_probs=43.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHH--hhcccchhhhhhhhhhhhhceeeecccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 019514 103 IPVSFMQTIKSFTPATTVVLQWLV--WRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAES 180 (340)
Q Consensus 103 ~~~~~~~~l~~~~pi~~~~l~~~~--l~e~~~~~~~~~i~l~~~Gv~i~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~ 180 (340)
.++..+.++.++.-+-..+.+.+. ++++++..+++.......|+.+....-.+..+......++..+++...+....-
T Consensus 251 ~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t 330 (524)
T PF05977_consen 251 GGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLNT 330 (524)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356667777766666555555543 467777777766666666655444333333334444455555666655544433
No 139
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=34.06 E-value=20 Score=31.47 Aligned_cols=45 Identities=9% Similarity=0.141 Sum_probs=38.4
Q ss_pred hhhhhHHHhhhhhhccCcccccchhhhhhHHhHhHHHHHhhhhhh
Q 019514 263 GNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLL 307 (340)
Q Consensus 263 ~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~~~~ 307 (340)
..-.++.+..+|+++.|.+.|..|+...+++-+|+++-+..+.++
T Consensus 98 Rsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d 142 (330)
T KOG1583|consen 98 RSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKD 142 (330)
T ss_pred ecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcc
Confidence 444678888999999999999999999999999999887765544
No 140
>PF15102 TMEM154: TMEM154 protein family
Probab=32.75 E-value=38 Score=26.61 Aligned_cols=22 Identities=14% Similarity=0.040 Sum_probs=11.3
Q ss_pred hhhHHhHhHHHHHhhhhhhhCC
Q 019514 289 GCAITLIGCTFYGYIRHLLSQQ 310 (340)
Q Consensus 289 G~~li~~g~~~~~~~~~~~~~~ 310 (340)
+.++++..++++.+.++++.|+
T Consensus 68 LvlLLl~vV~lv~~~kRkr~K~ 89 (146)
T PF15102_consen 68 LVLLLLSVVCLVIYYKRKRTKQ 89 (146)
T ss_pred HHHHHHHHHHheeEEeecccCC
Confidence 3444555566665555544443
No 141
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=31.77 E-value=43 Score=23.64 Aligned_cols=27 Identities=15% Similarity=0.028 Sum_probs=21.5
Q ss_pred cccccchhhhhhHHhHhHHHHHhhhhh
Q 019514 280 NPISGMNAVGCAITLIGCTFYGYIRHL 306 (340)
Q Consensus 280 e~~s~~~~~G~~li~~g~~~~~~~~~~ 306 (340)
-.+++..++|.++++.|..+|..+..+
T Consensus 3 ~~~~~~~iLgi~l~~~~~~Ly~lr~~~ 29 (84)
T PF07444_consen 3 FGFGPSYILGIILILGGLALYFLRFFR 29 (84)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 357888999999999999999754433
No 142
>PF15345 TMEM51: Transmembrane protein 51
Probab=30.84 E-value=69 Score=27.30 Aligned_cols=22 Identities=18% Similarity=0.101 Sum_probs=13.7
Q ss_pred hhhHHhHhHHHHHhhhhhhhCC
Q 019514 289 GCAITLIGCTFYGYIRHLLSQQ 310 (340)
Q Consensus 289 G~~li~~g~~~~~~~~~~~~~~ 310 (340)
|.++.++.+++--+.++++.++
T Consensus 68 Gv~LLLLSICL~IR~KRr~rq~ 89 (233)
T PF15345_consen 68 GVALLLLSICLSIRDKRRRRQG 89 (233)
T ss_pred HHHHHHHHHHHHHHHHHHHhhc
Confidence 6666777777766655554433
No 143
>PF13937 DUF4212: Domain of unknown function (DUF4212)
Probab=29.62 E-value=2e+02 Score=20.15 Aligned_cols=52 Identities=15% Similarity=0.094 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHhhh--cCCCCchHHHHHHHHHHHHHHHHHHH
Q 019514 11 FRSLLAILQWWVFNVTV-IITNKWIFQ--KLDFKFPLSVSCIHFICSSIGAYLVI 62 (340)
Q Consensus 11 ~~~~~~~~~~~~~~~~~-~~~~k~~~~--~~~~~~p~~~~~~r~~~~~~~l~~~~ 62 (340)
-.+..+.++|.+.+... .+....+-+ -.++|...++..=-....++++..+.
T Consensus 12 rl~~~lL~iW~vvsfg~~~lfa~~Ln~~~~~GfPlgfw~aaQGsi~~fviLi~~Y 66 (81)
T PF13937_consen 12 RLIAILLAIWFVVSFGVGILFADELNQITFGGFPLGFWFAAQGSIIVFVILIFVY 66 (81)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCeeCCCChHHHHHHHhHHHHHHHHHHHH
Confidence 34455777888777766 454444422 23788777776666666666655543
No 144
>COG5522 Predicted integral membrane protein [Function unknown]
Probab=29.41 E-value=3.5e+02 Score=22.83 Aligned_cols=62 Identities=11% Similarity=0.078 Sum_probs=37.4
Q ss_pred CccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCC---------------CCchHHHHHHHHHHHHHHHHHHHHHhh
Q 019514 2 EASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLD---------------FKFPLSVSCIHFICSSIGAYLVIKVLK 66 (340)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~---------------~~~p~~~~~~r~~~~~~~l~~~~~~~~ 66 (340)
++++.+++.+..++....|.+ .+.+.|+++-+||. -|.|+-+...-.+.+.+.......+++
T Consensus 148 reRpgksgl~~svl~~~~lg~---~~lfinrrLGtNYlylsk~P~~~sildvlgpwp~Yivs~v~ilca~~f~lyllfr~ 224 (236)
T COG5522 148 RERPGKSGLVMSVLVAISLGI---MCLFINRRLGTNYLYLSKEPESASILDVLGPWPFYIVSEVLILCAVWFLLYLLFRK 224 (236)
T ss_pred ccCCCccchhHHHHHHHHHHH---HHHHHHHHhcCceeEeecCCCchhHHHHhcCccHHHHHHHHHHHHHHHHHHHhccc
Confidence 367777877777776666654 55677888877641 134555555555556555555444433
No 145
>KOG1623 consensus Multitransmembrane protein [General function prediction only]
Probab=29.03 E-value=1.7e+02 Score=25.40 Aligned_cols=20 Identities=30% Similarity=0.330 Sum_probs=14.1
Q ss_pred cccchhhhhhHHhHhHHHHH
Q 019514 282 ISGMNAVGCAITLIGCTFYG 301 (340)
Q Consensus 282 ~s~~~~~G~~li~~g~~~~~ 301 (340)
+-..+.+|+.+.+.=.++|-
T Consensus 186 IaipN~iG~~l~~~QL~Ly~ 205 (243)
T KOG1623|consen 186 IAIPNVLGFLLGLIQLILYF 205 (243)
T ss_pred EEcccHHHHHHHHHHHHHhh
Confidence 33455688888888888883
No 146
>PF10710 DUF2512: Protein of unknown function (DUF2512); InterPro: IPR019649 Proteins in this entry are predicted to be integral membrane proteins, and many of them are annotated as being YndM protein. They are all found in Firmicutes. The true function is not known.
Probab=27.45 E-value=3e+02 Score=21.44 Aligned_cols=32 Identities=13% Similarity=0.226 Sum_probs=20.2
Q ss_pred HHHHhccchhHHHHHhhhh-hHHHhhhhhhccC
Q 019514 248 FYVIHSTTAVTFNVAGNLK-VAVAVLVSWLIFR 279 (340)
Q Consensus 248 ~~~~~~~~a~~~s~~~~~~-~v~~~l~~~~~~~ 279 (340)
.+.+.+.+...+++.+..- -+...+.+..+.+
T Consensus 50 l~ILPr~gN~~AtiaD~~La~~~iW~~~~~~~~ 82 (136)
T PF10710_consen 50 LFILPRTGNIVATIADFGLAFLVIWLMGYILTG 82 (136)
T ss_pred HheeeCCCChhHHHHHHHHHHHHHHHHHHHHhc
Confidence 4557888888888876554 4444455555555
No 147
>PHA03049 IMV membrane protein; Provisional
Probab=27.29 E-value=92 Score=20.75 Aligned_cols=22 Identities=23% Similarity=0.294 Sum_probs=15.7
Q ss_pred hhhhhhHHhHhHHHHHhhhhhh
Q 019514 286 NAVGCAITLIGCTFYGYIRHLL 307 (340)
Q Consensus 286 ~~~G~~li~~g~~~~~~~~~~~ 307 (340)
-++++.++++|.++|....++.
T Consensus 6 ~l~iICVaIi~lIvYgiYnkk~ 27 (68)
T PHA03049 6 ILVIICVVIIGLIVYGIYNKKT 27 (68)
T ss_pred HHHHHHHHHHHHHHHHHHhccc
Confidence 3566777888999988766544
No 148
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=27.24 E-value=5.3e+02 Score=24.29 Aligned_cols=41 Identities=17% Similarity=0.143 Sum_probs=21.6
Q ss_pred hhhhhHHHhhhhhhccCcccc--cchhhhhhHHhHhHHHHHhh
Q 019514 263 GNLKVAVAVLVSWLIFRNPIS--GMNAVGCAITLIGCTFYGYI 303 (340)
Q Consensus 263 ~~~~~v~~~l~~~~~~~e~~s--~~~~~G~~li~~g~~~~~~~ 303 (340)
+.+..+..++.-...-+++-+ ....++.++++..++.|...
T Consensus 161 G~l~Sl~~i~tka~~~~~~~sA~~yF~~s~~~~llC~i~y~~l 203 (406)
T KOG1479|consen 161 GTLTSLLRILTKAAFSDSRTSALIYFITSTVILLLCFVLYLVL 203 (406)
T ss_pred hHHHHHHHHHHHHhcCCCCceeehhHHHHHHHHHHHHHHHHHh
Confidence 333333333333344444443 33455667777788888743
No 149
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=26.29 E-value=5.8e+02 Score=24.35 Aligned_cols=49 Identities=18% Similarity=0.292 Sum_probs=28.0
Q ss_pred HHHHHhhhhhHHHhhhhhhccCcc-cccchhhhhhHHhHhHHHHHhhhhhh
Q 019514 258 TFNVAGNLKVAVAVLVSWLIFRNP-ISGMNAVGCAITLIGCTFYGYIRHLL 307 (340)
Q Consensus 258 ~~s~~~~~~~v~~~l~~~~~~~e~-~s~~~~~G~~li~~g~~~~~~~~~~~ 307 (340)
.+++-+.+-|+++.+ +++.++-. -.-.-.-|++.+++|++.+...+.++
T Consensus 161 shNiGGal~~~~~~l-a~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~P 210 (448)
T COG2271 161 SHNIGGALAPLVALL-AFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRP 210 (448)
T ss_pred hhhcccchHHHHHHH-HHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 344555555555544 55554432 22233457778888888877666544
No 150
>PF11446 DUF2897: Protein of unknown function (DUF2897); InterPro: IPR021550 This is a bacterial family of uncharacterised proteins.
Probab=25.32 E-value=1.2e+02 Score=19.50 Aligned_cols=15 Identities=7% Similarity=0.146 Sum_probs=8.9
Q ss_pred hhHHhHhHHHHHhhh
Q 019514 290 CAITLIGCTFYGYIR 304 (340)
Q Consensus 290 ~~li~~g~~~~~~~~ 304 (340)
++++++|+++-+..-
T Consensus 8 IIviVlgvIigNia~ 22 (55)
T PF11446_consen 8 IIVIVLGVIIGNIAA 22 (55)
T ss_pred HHHHHHHHHHhHHHH
Confidence 455666777666443
No 151
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=25.04 E-value=6.2e+02 Score=24.33 Aligned_cols=29 Identities=10% Similarity=0.453 Sum_probs=14.2
Q ss_pred HHHHHHHhhhcCCCCchHHHHHHHHHHHH
Q 019514 27 VIITNKWIFQKLDFKFPLSVSCIHFICSS 55 (340)
Q Consensus 27 ~~~~~k~~~~~~~~~~p~~~~~~r~~~~~ 55 (340)
-....-++.+++++...+.+...-+.++.
T Consensus 166 gp~i~g~l~~~~g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 166 SMLATPWLAAKYGWSVAFALSVVGMLITV 194 (500)
T ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 33455566665555544444443334444
No 152
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=24.16 E-value=6.3e+02 Score=24.05 Aligned_cols=56 Identities=14% Similarity=0.016 Sum_probs=33.7
Q ss_pred hhcccchhhhhhhhhhhhhc--eeeecccccchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 019514 127 WRKYFDWRIWASLVPIVGGI--LLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHS 184 (340)
Q Consensus 127 l~e~~~~~~~~~i~l~~~Gv--~i~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~ 184 (340)
-|.|+.+.|++-++++++=. ++++..+. -.++....+.++.|-.+-..+.+..+|.
T Consensus 319 ~~~~iHpiQY~LVGlAl~lFYlLLLSlSEh--i~F~~AYliAa~a~i~Li~~Y~~~vl~~ 376 (430)
T PF06123_consen 319 SKLRIHPIQYLLVGLALVLFYLLLLSLSEH--IGFNLAYLIAALACIGLISLYLSSVLKS 376 (430)
T ss_pred hcCcccHHHHHHHHHHHHHHHHHHHHHHhh--hchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 46778888876544444333 33444332 1245555666777777777788888874
No 153
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=24.12 E-value=6.1e+02 Score=23.89 Aligned_cols=25 Identities=8% Similarity=0.040 Sum_probs=14.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHH
Q 019514 156 FNMFGFCAALFGCLATSTKTILAES 180 (340)
Q Consensus 156 ~~~~G~~~~l~~~~~~a~~~v~~~~ 180 (340)
..+..++.+.++++.+-....+.||
T Consensus 292 ~p~~A~iiG~iag~v~~~~~~~~~~ 316 (404)
T TIGR03644 292 SPLAATLIGAVGGVIVVFSIVLLDK 316 (404)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3455666676666655554444554
No 154
>TIGR00770 Dcu anaerobic c4-dicarboxylate membrane transporter family protein. These proteins are members of th C4-Dicarboxylate Uptake (Dcu) Family (TC 2.A.13). Most proteins in this family have 12 GES predicted transmembrane regions; however one member has 10 experimentally determined transmembrane regions with both the N- and C-termini localized to the periplasm. The two Escherichia coli proteins, DcuA and DcuB, transport aspartate, malate, fumarate and succinate, and function as antiporters with any two of these substrates. Since DcuA is encoded in an operon with the gene for aspartase, and DcuB is encoded in an operon with the gene for fumarase, their physiological functions may be to catalyze aspartate:fumarate and fumarate:malate exchange during the anaerobic utilization of aspartate and fumarate, respectively.
Probab=23.76 E-value=6.4e+02 Score=23.97 Aligned_cols=12 Identities=17% Similarity=0.249 Sum_probs=6.7
Q ss_pred HHHHHHHhhccc
Q 019514 120 VVLQWLVWRKYF 131 (340)
Q Consensus 120 ~~l~~~~l~e~~ 131 (340)
.+++.++.+-|.
T Consensus 4 ~~~~~~~~g~r~ 15 (430)
T TIGR00770 4 IVLLCIFLGARL 15 (430)
T ss_pred hHHHHHHHHHhh
Confidence 345556666555
No 155
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=23.63 E-value=27 Score=21.06 Aligned_cols=13 Identities=31% Similarity=0.636 Sum_probs=6.5
Q ss_pred HhHHHHHhhhhhh
Q 019514 295 IGCTFYGYIRHLL 307 (340)
Q Consensus 295 ~g~~~~~~~~~~~ 307 (340)
+|..+|...++.+
T Consensus 21 iGl~IyQkikqIr 33 (49)
T PF11044_consen 21 IGLSIYQKIKQIR 33 (49)
T ss_pred HHHHHHHHHHHHH
Confidence 4555565544433
No 156
>PF13038 DUF3899: Domain of unknown function (DUF3899)
Probab=22.91 E-value=59 Score=23.16 Aligned_cols=18 Identities=22% Similarity=0.301 Sum_probs=12.9
Q ss_pred cchhhhhhHHhHhHHHHH
Q 019514 284 GMNAVGCAITLIGCTFYG 301 (340)
Q Consensus 284 ~~~~~G~~li~~g~~~~~ 301 (340)
...++|.++.++|.+++.
T Consensus 4 ~~Fl~~l~lliig~~~~v 21 (92)
T PF13038_consen 4 ILFLVGLILLIIGGFLFV 21 (92)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 345678888888877764
No 157
>PF11027 DUF2615: Protein of unknown function (DUF2615); InterPro: IPR020309 This entry represents a group of uncharacterised protein from the Metazoa, including CD034 (or C4orf34) and YQF4 (or C34C12.4).
Probab=22.42 E-value=2.2e+02 Score=20.96 Aligned_cols=20 Identities=5% Similarity=-0.056 Sum_probs=13.1
Q ss_pred hhhhhhHHhHhHHHHHhhhh
Q 019514 286 NAVGCAITLIGCTFYGYIRH 305 (340)
Q Consensus 286 ~~~G~~li~~g~~~~~~~~~ 305 (340)
.++.++.+++++++|.....
T Consensus 56 ~~~~~~w~~~A~~ly~~RP~ 75 (103)
T PF11027_consen 56 FMMMMLWMVLAMALYLLRPS 75 (103)
T ss_pred HHHHHHHHHHHHHHHHcCch
Confidence 44556667777788876554
No 158
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=22.34 E-value=3.3e+02 Score=20.14 Aligned_cols=41 Identities=15% Similarity=0.167 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhceeeecc
Q 019514 112 KSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT 152 (340)
Q Consensus 112 ~~~~pi~~~~l~~~~l~e~~~~~~~~~i~l~~~Gv~i~~~~ 152 (340)
....++...+-.+.+.+.||++.-|.+..+.++|+.++...
T Consensus 65 GGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 65 GGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred cchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 34445555666778889999999999999999999887654
No 159
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=21.71 E-value=6.6e+02 Score=23.40 Aligned_cols=15 Identities=27% Similarity=0.242 Sum_probs=8.4
Q ss_pred CCccccchhhHHHHH
Q 019514 1 MEASLCTWSVFRSLL 15 (340)
Q Consensus 1 m~~~~~~~~~~~~~~ 15 (340)
|+.+..++=+++...
T Consensus 1 M~~S~~D~~~~r~W~ 15 (374)
T PF01528_consen 1 MKSSRVDRINWRIWL 15 (374)
T ss_pred CCcchhhHHHHHHHH
Confidence 555555555555554
No 160
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=21.70 E-value=7e+02 Score=23.69 Aligned_cols=15 Identities=27% Similarity=0.470 Sum_probs=7.4
Q ss_pred hhhhhHHhHhHHHHH
Q 019514 287 AVGCAITLIGCTFYG 301 (340)
Q Consensus 287 ~~G~~li~~g~~~~~ 301 (340)
.++.+++++.+..|.
T Consensus 179 ~~a~~v~l~~i~~~~ 193 (437)
T TIGR00939 179 GTPCVVQLICIVCYL 193 (437)
T ss_pred HHHHHHHHHHHHHHH
Confidence 344555555555553
No 161
>PF09948 DUF2182: Predicted metal-binding integral membrane protein (DUF2182); InterPro: IPR018688 This family of various hypothetical bacterial membrane proteins having predicted metal-binding properties has no known function.
Probab=21.65 E-value=4.7e+02 Score=21.70 Aligned_cols=133 Identities=15% Similarity=0.099 Sum_probs=66.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHH-HHHHHHhhc---------CCCC--cCCcch
Q 019514 10 VFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGA-YLVIKVLKL---------KPLI--TVEPED 77 (340)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l-~~~~~~~~~---------~~~~--~~~~~~ 77 (340)
......+...|..++...+...-.+.. .....|........+.+.+++ ...+.+... .|.. ...++.
T Consensus 40 ~~f~~GYl~vW~~~g~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~Ll~AG~yQ~sp~K~~cL~~Cr~p~~f~~~~wr~ 118 (191)
T PF09948_consen 40 ALFVAGYLAVWLAFGLVATALQWALHQ-LALLSPMMASASPWLAGAVLLAAGLYQFSPLKQACLNHCRSPLSFLAFHWRA 118 (191)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhchhhhhhhhHHHHHHHHHHHHHhccHHHHHHHHHCCCcchHhhcCCCc
Confidence 445555888898888876655544433 122224433233223222222 222222111 1110 012232
Q ss_pred hhHHhHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhhcccch-----hhhhhhhhhhhhce
Q 019514 78 RWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDW-----RIWASLVPIVGGIL 147 (340)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~l~~~~l~e~~~~-----~~~~~i~l~~~Gv~ 147 (340)
..+..+..|+-++.....-.+++-.+.. +...-+..+.+.++.+..-||..+ .+..+..++..|+.
T Consensus 119 g~~~alr~Gl~hG~~CvGCCWaLMllmf----v~G~mnl~wMa~lt~~~~~EK~~p~g~~l~r~~G~~l~~~g~~ 189 (191)
T PF09948_consen 119 GARGALRMGLRHGLYCVGCCWALMLLMF----VVGVMNLAWMAALTALMFAEKLLPWGRRLSRAVGVALIVWGVL 189 (191)
T ss_pred ccchHHHHHHHHccHHHHHHHHHHHHHH----HhccccHHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHH
Confidence 2455666777777777766666544322 122335667777777777788532 33556666665554
No 162
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=21.62 E-value=1.7e+02 Score=23.09 Aligned_cols=27 Identities=4% Similarity=0.025 Sum_probs=15.7
Q ss_pred hccchhHHHHHhhhhhHHHhhhhhhcc
Q 019514 252 HSTTAVTFNVAGNLKVAVAVLVSWLIF 278 (340)
Q Consensus 252 ~~~~a~~~s~~~~~~~v~~~l~~~~~~ 278 (340)
.+-+....+.+.|+-|.+..+++.+.+
T Consensus 70 ~EkslL~sA~LvYi~PL~~l~v~~~La 96 (150)
T COG3086 70 EEKSLLKSALLVYIFPLVGLFLGAILA 96 (150)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555566666666666666555543
No 163
>KOG1623 consensus Multitransmembrane protein [General function prediction only]
Probab=21.54 E-value=1.3e+02 Score=25.95 Aligned_cols=53 Identities=15% Similarity=0.199 Sum_probs=34.5
Q ss_pred chhhhhhhhhhhhhceeee-----ccccc-chHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 019514 132 DWRIWASLVPIVGGILLTS-----VTELS-FNMFGFCAALFGCLATSTKTILAESLLHS 184 (340)
Q Consensus 132 ~~~~~~~i~l~~~Gv~i~~-----~~~~~-~~~~G~~~~l~~~~~~a~~~v~~~~~~~~ 184 (340)
+...+..+.++..|+.+.. -++.. .+..|.+++.++.+.+|.-....++..|.
T Consensus 95 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lG~vc~~~nI~~~~sPL~~m~~VIkt 153 (243)
T KOG1623|consen 95 TVKIVLALVLGVIGLIILLTLLLFHDPERRVSVLGIVCAVFNISMFAAPLSVIRKVIKT 153 (243)
T ss_pred eeEeeehHHHHHHHHHHHHHHHhcCCcceeeeeeehhhhhhhHHhhhccHHhhhhheec
Confidence 3344445555555554432 12222 45789999999999999988888887764
No 164
>COG1971 Predicted membrane protein [Function unknown]
Probab=21.54 E-value=1.2e+02 Score=25.16 Aligned_cols=44 Identities=11% Similarity=0.180 Sum_probs=26.4
Q ss_pred hhHHHHHhhhhhHHHhhhhhhccCcccccchhhhhhHH-hHhHHH
Q 019514 256 AVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAIT-LIGCTF 299 (340)
Q Consensus 256 a~~~s~~~~~~~v~~~l~~~~~~~e~~s~~~~~G~~li-~~g~~~ 299 (340)
+...++.....|......+.++-+-.-.+.+|+|.++. +.|..+
T Consensus 40 a~~fG~f~~i~pliG~~~g~~~s~~i~~~~~wigf~lL~~lG~~m 84 (190)
T COG1971 40 ALIFGVFQAIMPLIGWFIGKFLSTFIAEWAHWIGFVLLIILGLKM 84 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555566777777776665445567787766554 445443
No 165
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=21.37 E-value=5.2e+02 Score=22.09 Aligned_cols=48 Identities=6% Similarity=-0.189 Sum_probs=30.9
Q ss_pred cCCcchhhHHhHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHH
Q 019514 72 TVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATT 119 (340)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~ 119 (340)
+.+++..+....|+-+|.+..........+.++.+...+-..+..++.
T Consensus 95 ~~s~~t~lal~~PCPvCl~Ai~~S~~l~a~~~~~s~~~ig~~~g~if~ 142 (224)
T PF09930_consen 95 DSSRRTFLALSLPCPVCLTAIFFSIMLLAPSIGLSGWEIGLVLGLIFF 142 (224)
T ss_pred CCcccchhhhhcCchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 334555677778888888777666666667777666665555544443
No 166
>COG2323 Predicted membrane protein [Function unknown]
Probab=21.03 E-value=5.3e+02 Score=22.05 Aligned_cols=33 Identities=9% Similarity=0.124 Sum_probs=26.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCc
Q 019514 43 PLSVSCIHFICSSIGAYLVIKVLKLKPLITVEP 75 (340)
Q Consensus 43 p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~ 75 (340)
+..-..+|.++..++++++.+..+++...+.+.
T Consensus 3 ~~~~~~ir~vi~~~~l~l~~ri~Gkr~isqmt~ 35 (224)
T COG2323 3 FLLEVAIRSVIGYLILLLLLRIMGKRSISQMTI 35 (224)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhCcCccccCCH
Confidence 356678999999999999999999887766653
No 167
>TIGR02587 putative integral membrane protein TIGR02587. Members of this family are found in Nostoc sp. PCC 7120, Agrobacterium tumefaciens, Sinorhizobium meliloti, and Gloeobacter violaceus in a conserved two-gene neighborhood. This family, as defined, includes some members of COG4711 but is narrower and strictly bacterial. Members appear to span the membrane seven times.
Probab=20.74 E-value=5.9e+02 Score=22.44 Aligned_cols=23 Identities=17% Similarity=0.005 Sum_probs=14.3
Q ss_pred hhhhhccCc---ccccchhhhhhHHh
Q 019514 272 LVSWLIFRN---PISGMNAVGCAITL 294 (340)
Q Consensus 272 l~~~~~~~e---~~s~~~~~G~~li~ 294 (340)
.+-.++||+ .-++.+++|-+++.
T Consensus 84 ~~~L~lfgri~~~~pl~e~Lg~vivl 109 (271)
T TIGR02587 84 AAMLWLFGIITPETSLKEIVGKVAFQ 109 (271)
T ss_pred HHHHHHHccCCCCCCHHHHHHHHHHH
Confidence 334455555 35677888877765
No 168
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=20.52 E-value=6.6e+02 Score=22.96 Aligned_cols=6 Identities=0% Similarity=-0.042 Sum_probs=2.4
Q ss_pred HHHHHH
Q 019514 204 LSIPAL 209 (340)
Q Consensus 204 ~~~~~~ 209 (340)
.+|..+
T Consensus 41 ~lP~li 46 (385)
T PF03547_consen 41 FLPALI 46 (385)
T ss_pred HHHHHH
Confidence 344433
No 169
>PRK12437 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=20.10 E-value=93 Score=27.39 Aligned_cols=21 Identities=14% Similarity=0.309 Sum_probs=17.8
Q ss_pred cccchhhhhhHHhHhHHHHHh
Q 019514 282 ISGMNAVGCAITLIGCTFYGY 302 (340)
Q Consensus 282 ~s~~~~~G~~li~~g~~~~~~ 302 (340)
+|..|+++..+++.|+.+...
T Consensus 235 ls~~Q~~sl~~i~~g~~~~~~ 255 (269)
T PRK12437 235 LRIAQVISIPLIIIGIILIIY 255 (269)
T ss_pred hhHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999877643
Done!