Query 019516
Match_columns 340
No_of_seqs 297 out of 2321
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 03:01:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019516.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019516hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2och_A Hypothetical protein DN 99.9 1.1E-21 3.8E-26 148.5 8.0 69 1-72 4-72 (73)
2 2dn9_A DNAJ homolog subfamily 99.8 1.4E-21 4.9E-26 149.9 8.0 72 3-74 5-76 (79)
3 1hdj_A Human HSP40, HDJ-1; mol 99.8 1.8E-21 6E-26 148.8 8.2 73 4-77 2-74 (77)
4 1bq0_A DNAJ, HSP40; chaperone, 99.8 5.8E-22 2E-26 159.9 5.0 74 4-77 2-75 (103)
5 2ej7_A HCG3 gene; HCG3 protein 99.8 6.7E-21 2.3E-25 147.2 8.1 72 4-75 8-80 (82)
6 2ctp_A DNAJ homolog subfamily 99.8 1.1E-20 3.9E-25 144.6 8.4 71 3-74 5-75 (78)
7 2ctq_A DNAJ homolog subfamily 99.8 3.9E-21 1.3E-25 157.4 5.9 75 2-76 17-91 (112)
8 2ctw_A DNAJ homolog subfamily 99.8 1.5E-20 5.2E-25 153.2 9.2 71 3-73 15-85 (109)
9 2cug_A Mkiaa0962 protein; DNAJ 99.8 1.6E-20 5.3E-25 147.3 8.1 71 3-74 15-85 (88)
10 2o37_A Protein SIS1; HSP40, J- 99.8 2.7E-20 9.2E-25 147.2 7.6 72 1-75 4-75 (92)
11 2dmx_A DNAJ homolog subfamily 99.8 2.7E-20 9.3E-25 147.0 7.2 74 4-77 8-82 (92)
12 2lgw_A DNAJ homolog subfamily 99.8 2.2E-20 7.6E-25 149.7 6.3 73 5-77 2-75 (99)
13 2yua_A Williams-beuren syndrom 99.8 5.1E-20 1.8E-24 147.5 8.3 70 3-72 15-84 (99)
14 2ctr_A DNAJ homolog subfamily 99.8 3.9E-20 1.3E-24 145.0 7.3 71 4-75 6-76 (88)
15 1wjz_A 1700030A21RIK protein; 99.8 4.4E-20 1.5E-24 146.1 6.8 71 3-73 14-90 (94)
16 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 2.8E-20 9.5E-25 151.5 4.5 72 2-73 12-87 (109)
17 3apq_A DNAJ homolog subfamily 99.8 1.3E-19 4.4E-24 162.2 8.5 73 5-77 2-74 (210)
18 3hho_A CO-chaperone protein HS 99.7 9.3E-18 3.2E-22 147.6 11.3 69 3-71 2-77 (174)
19 1fpo_A HSC20, chaperone protei 99.7 2.2E-17 7.4E-22 144.8 12.5 68 5-72 1-75 (171)
20 3lz8_A Putative chaperone DNAJ 99.7 2.7E-19 9.1E-24 172.0 0.0 70 3-73 26-95 (329)
21 2l6l_A DNAJ homolog subfamily 99.7 3.5E-18 1.2E-22 147.4 6.3 70 3-72 8-83 (155)
22 2ys8_A RAB-related GTP-binding 99.7 2.6E-18 9E-23 135.2 3.5 62 3-65 25-86 (90)
23 3bvo_A CO-chaperone protein HS 99.7 5E-17 1.7E-21 146.6 11.6 69 4-72 42-119 (207)
24 1gh6_A Large T antigen; tumor 99.7 6.6E-19 2.2E-23 144.5 -1.8 85 5-102 8-94 (114)
25 1faf_A Large T antigen; J doma 99.7 3.9E-17 1.3E-21 125.5 4.2 65 5-74 11-77 (79)
26 2pf4_E Small T antigen; PP2A, 99.6 7.9E-18 2.7E-22 147.4 -0.4 64 5-72 11-76 (174)
27 1iur_A KIAA0730 protein; DNAJ 99.6 5.7E-17 1.9E-21 127.1 2.4 60 5-64 16-76 (88)
28 3uo3_A J-type CO-chaperone JAC 99.6 4.7E-16 1.6E-20 137.4 7.4 64 4-70 10-80 (181)
29 2qwo_B Putative tyrosine-prote 99.6 1.5E-16 5.3E-21 125.3 2.4 56 5-60 33-91 (92)
30 3apo_A DNAJ homolog subfamily 99.6 7.8E-17 2.7E-21 170.1 0.9 75 3-77 19-93 (780)
31 1n4c_A Auxilin; four helix bun 99.6 1.3E-16 4.6E-21 140.5 1.6 63 5-67 117-182 (182)
32 3ag7_A Putative uncharacterize 99.6 5.3E-16 1.8E-20 125.6 3.2 59 3-62 39-104 (106)
33 2guz_A Mitochondrial import in 99.5 2.5E-15 8.4E-20 113.0 1.9 56 5-64 14-70 (71)
34 2y4t_A DNAJ homolog subfamily 98.9 4.8E-10 1.6E-14 107.4 4.7 65 5-69 382-449 (450)
35 2guz_B Mitochondrial import in 98.6 6.3E-08 2.1E-12 71.1 4.7 50 7-60 6-58 (65)
36 2qzg_A Conserved uncharacteriz 34.6 17 0.00058 27.9 1.8 41 268-308 4-47 (94)
37 1ny9_A Transcriptional activat 31.4 88 0.003 25.0 5.9 53 12-72 71-124 (143)
38 2cqn_A Formin-binding protein 30.7 1.1E+02 0.0036 22.3 5.6 53 17-70 6-61 (77)
39 1ceu_A Protein (HIV-1 regulato 29.1 74 0.0025 21.5 4.0 29 159-187 16-44 (51)
40 3cjl_A Domain of unknown funct 25.5 1.3E+02 0.0044 22.7 5.3 36 282-317 32-67 (88)
41 2b7e_A PRE-mRNA processing pro 21.4 1.7E+02 0.0057 20.3 4.8 49 20-71 3-56 (59)
42 1u5e_A SRC-associated adaptor 21.2 1.6E+02 0.0056 25.1 6.0 47 275-321 5-54 (211)
43 2qsb_A UPF0147 protein TA0600; 20.7 1.8E+02 0.0063 21.9 5.2 26 283-308 18-43 (89)
No 1
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.85 E-value=1.1e-21 Score=148.47 Aligned_cols=69 Identities=57% Similarity=0.883 Sum_probs=63.2
Q ss_pred CCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCC
Q 019516 1 MVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGK 72 (340)
Q Consensus 1 m~~~~~~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vLsd~~~R~~YD~~g~ 72 (340)
|+.+.+||++|||+++++.++||++|++++++||||++++. .+.|+.|++||++|+||.+|..||.+|.
T Consensus 4 m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 4 MVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp --CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 78899999999999999999999999999999999999754 4789999999999999999999999996
No 2
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.85 E-value=1.4e-21 Score=149.93 Aligned_cols=72 Identities=51% Similarity=0.779 Sum_probs=68.2
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCC
Q 019516 3 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEG 74 (340)
Q Consensus 3 ~~~~~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vLsd~~~R~~YD~~g~~~ 74 (340)
...+||+||||+++++.++||++||+++++||||++++++.+.+.|+.|++||++|+||.+|..||.+|..+
T Consensus 5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 357899999999999999999999999999999999987889999999999999999999999999999765
No 3
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.85 E-value=1.8e-21 Score=148.81 Aligned_cols=73 Identities=48% Similarity=0.793 Sum_probs=67.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCCC
Q 019516 4 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQ 77 (340)
Q Consensus 4 ~~~~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vLsd~~~R~~YD~~g~~~~~~ 77 (340)
..|||++|||+++++.++||++|++++++||||+++ ++.+.+.|+.|++||++|+||.+|..||.+|.+++..
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 74 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG 74 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCC-CTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccccc
Confidence 368999999999999999999999999999999997 4678899999999999999999999999999876543
No 4
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.84 E-value=5.8e-22 Score=159.91 Aligned_cols=74 Identities=45% Similarity=0.734 Sum_probs=69.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCCC
Q 019516 4 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQ 77 (340)
Q Consensus 4 ~~~~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vLsd~~~R~~YD~~g~~~~~~ 77 (340)
..+||+||||+++++.++||++||+++++||||++++++.+.++|+.|++||++|+||.+|..||.+|..++..
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~ 75 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQ 75 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcc
Confidence 46899999999999999999999999999999999877889999999999999999999999999999877654
No 5
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=6.7e-21 Score=147.22 Aligned_cols=72 Identities=46% Similarity=0.672 Sum_probs=66.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCC
Q 019516 4 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDP-KAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 75 (340)
Q Consensus 4 ~~~~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~-~a~~~f~~i~~Ay~vLsd~~~R~~YD~~g~~~~ 75 (340)
..+||+||||+++++.++||++|++++++||||++++.+ .+.+.|+.|++||++|+||.+|..||.+|..++
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 8 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp SCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 468999999999999999999999999999999998654 578899999999999999999999999997664
No 6
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=1.1e-20 Score=144.63 Aligned_cols=71 Identities=46% Similarity=0.770 Sum_probs=66.8
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCC
Q 019516 3 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEG 74 (340)
Q Consensus 3 ~~~~~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vLsd~~~R~~YD~~g~~~ 74 (340)
...+||+||||+++++.++||++|++++++||||+++ .+.+.+.|+.|++||++|+||.+|..||.+|..+
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNH-APGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCS-SHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 4679999999999999999999999999999999997 5788999999999999999999999999999765
No 7
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=3.9e-21 Score=157.41 Aligned_cols=75 Identities=32% Similarity=0.566 Sum_probs=69.8
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCC
Q 019516 2 VKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIP 76 (340)
Q Consensus 2 ~~~~~~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vLsd~~~R~~YD~~g~~~~~ 76 (340)
....|||+||||+++|+.++||+|||+++++||||++++++.+.++|+.|++||++|+||.+|..||.+|..++.
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~ 91 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS 91 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence 346899999999999999999999999999999999998888999999999999999999999999999976643
No 8
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.82 E-value=1.5e-20 Score=153.19 Aligned_cols=71 Identities=41% Similarity=0.679 Sum_probs=67.5
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCC
Q 019516 3 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKE 73 (340)
Q Consensus 3 ~~~~~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vLsd~~~R~~YD~~g~~ 73 (340)
...+||+||||+++|+.++||++||+++++||||++++++.+.++|+.|++||++|+||.+|..||.+|..
T Consensus 15 ~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~ 85 (109)
T 2ctw_A 15 SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSL 85 (109)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhccc
Confidence 46789999999999999999999999999999999998888999999999999999999999999999854
No 9
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.82 E-value=1.6e-20 Score=147.28 Aligned_cols=71 Identities=48% Similarity=0.649 Sum_probs=66.6
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCC
Q 019516 3 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEG 74 (340)
Q Consensus 3 ~~~~~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vLsd~~~R~~YD~~g~~~ 74 (340)
.+.|||+||||+++++.++||++||+++++||||++++ +.+.+.|+.|++||++|+||.+|..||.+|..+
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD-PGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS-TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 46799999999999999999999999999999999974 678899999999999999999999999999754
No 10
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.81 E-value=2.7e-20 Score=147.15 Aligned_cols=72 Identities=47% Similarity=0.782 Sum_probs=66.7
Q ss_pred CCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCC
Q 019516 1 MVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 75 (340)
Q Consensus 1 m~~~~~~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vLsd~~~R~~YD~~g~~~~ 75 (340)
|+.+.+||+||||+++++.++||++||+++++||||++++++ ++|+.|++||++|+||.+|..||.+|..++
T Consensus 4 m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~---~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 75 (92)
T 2o37_A 4 MVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDT---EKFKEISEAFEILNDPQKREIYDQYGLEAA 75 (92)
T ss_dssp CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCH---HHHHHHHHHHHHHTSHHHHHHHHHHCHHHH
T ss_pred cccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChH---HHHHHHHHHHHHHCCHHHHHHHHHHCHHHh
Confidence 778899999999999999999999999999999999998653 689999999999999999999999996543
No 11
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=2.7e-20 Score=146.98 Aligned_cols=74 Identities=49% Similarity=0.768 Sum_probs=67.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCCC
Q 019516 4 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGD-PKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQ 77 (340)
Q Consensus 4 ~~~~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~-~~a~~~f~~i~~Ay~vLsd~~~R~~YD~~g~~~~~~ 77 (340)
..+||+||||+++++.++||++||+++++||||+++.. +.+.++|+.|++||++|+||.+|..||.+|..++..
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 82 (92)
T 2dmx_A 8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRA 82 (92)
T ss_dssp CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCC
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 46899999999999999999999999999999999865 368899999999999999999999999999876544
No 12
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.81 E-value=2.2e-20 Score=149.70 Aligned_cols=73 Identities=51% Similarity=0.787 Sum_probs=65.0
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCCC
Q 019516 5 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGD-PKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQ 77 (340)
Q Consensus 5 ~~~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~-~~a~~~f~~i~~Ay~vLsd~~~R~~YD~~g~~~~~~ 77 (340)
.|||+||||+++++.++||++||+++++||||++++. +.+.+.|+.|++||++|+||.+|..||.+|..++..
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~ 75 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG 75 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 5899999999999999999999999999999999865 348899999999999999999999999999876543
No 13
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=5.1e-20 Score=147.46 Aligned_cols=70 Identities=41% Similarity=0.663 Sum_probs=65.8
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCC
Q 019516 3 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGK 72 (340)
Q Consensus 3 ~~~~~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vLsd~~~R~~YD~~g~ 72 (340)
...+||+||||+++++.++||++||+++++||||++++++.+.++|+.|++||+||+||.+|..||....
T Consensus 15 ~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 84 (99)
T 2yua_A 15 SRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLL 84 (99)
T ss_dssp CSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCC
T ss_pred CccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 3578999999999999999999999999999999998888899999999999999999999999998543
No 14
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=3.9e-20 Score=145.00 Aligned_cols=71 Identities=44% Similarity=0.713 Sum_probs=66.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCC
Q 019516 4 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 75 (340)
Q Consensus 4 ~~~~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vLsd~~~R~~YD~~g~~~~ 75 (340)
..+||+||||+++++.++||++||+++++||||+++ ++.+.++|+.|++||++|+||.+|..||.+|..++
T Consensus 6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 76 (88)
T 2ctr_A 6 SGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAF 76 (88)
T ss_dssp CCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCC-SHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHH
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 578999999999999999999999999999999997 67889999999999999999999999999986543
No 15
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.80 E-value=4.4e-20 Score=146.13 Aligned_cols=71 Identities=24% Similarity=0.519 Sum_probs=65.2
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------hHHHHHHHHHHHHHHHcCChhHHHHHhhcCCC
Q 019516 3 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGD------PKAAKNFQVLGEAYQVLSDPEKREAYDKHGKE 73 (340)
Q Consensus 3 ~~~~~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~------~~a~~~f~~i~~Ay~vLsd~~~R~~YD~~g~~ 73 (340)
...+||+||||+++++.++||++||+++++||||+++.+ +.+.+.|+.|++||++|+||.+|..||.+...
T Consensus 14 ~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 90 (94)
T 1wjz_A 14 LKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSG 90 (94)
T ss_dssp SCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSCC
T ss_pred CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHccC
Confidence 467999999999999999999999999999999999743 45789999999999999999999999998753
No 16
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.79 E-value=2.8e-20 Score=151.48 Aligned_cols=72 Identities=33% Similarity=0.462 Sum_probs=66.3
Q ss_pred CCCCCcccccCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC---ChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCC
Q 019516 2 VKDTAYYDVLGVNVDA-SPAEIKKAYYLKARIVHPDKNPG---DPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKE 73 (340)
Q Consensus 2 ~~~~~~Y~iLgv~~~a-s~~eIk~aYr~la~~~HPDk~~~---~~~a~~~f~~i~~Ay~vLsd~~~R~~YD~~g~~ 73 (340)
....+||++|||+++| +.++||+|||+++++||||++++ .+.+.+.|+.|++||++|+||.+|..||.+|..
T Consensus 12 ~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~ 87 (109)
T 2qsa_A 12 CGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDH 87 (109)
T ss_dssp TTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred cCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccC
Confidence 4578999999999999 99999999999999999999975 355889999999999999999999999999854
No 17
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.79 E-value=1.3e-19 Score=162.21 Aligned_cols=73 Identities=41% Similarity=0.737 Sum_probs=69.1
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCCC
Q 019516 5 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQ 77 (340)
Q Consensus 5 ~~~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vLsd~~~R~~YD~~g~~~~~~ 77 (340)
.|||++|||+++|+.++||+|||+++++||||++++++++.++|+.|++||++|+||.+|+.||.+|..++..
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~ 74 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 74 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccccc
Confidence 5899999999999999999999999999999999888889999999999999999999999999999877543
No 18
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.74 E-value=9.3e-18 Score=147.56 Aligned_cols=69 Identities=20% Similarity=0.398 Sum_probs=62.2
Q ss_pred CCCCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHHcCChhHHHHHhhcC
Q 019516 3 KDTAYYDVLGVNVDAS--PAEIKKAYYLKARIVHPDKNPGDPK-----AAKNFQVLGEAYQVLSDPEKREAYDKHG 71 (340)
Q Consensus 3 ~~~~~Y~iLgv~~~as--~~eIk~aYr~la~~~HPDk~~~~~~-----a~~~f~~i~~Ay~vLsd~~~R~~YD~~g 71 (340)
..+|||++|||+++++ ..+||++||+++++||||++++.+. +.+.|+.|++||+||+||.+|..||...
T Consensus 2 ~~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 77 (174)
T 3hho_A 2 NAMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSL 77 (174)
T ss_dssp --CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHc
Confidence 4679999999999998 9999999999999999999987654 6689999999999999999999999843
No 19
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.73 E-value=2.2e-17 Score=144.80 Aligned_cols=68 Identities=21% Similarity=0.331 Sum_probs=62.3
Q ss_pred CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHHcCChhHHHHHhhcCC
Q 019516 5 TAYYDVLGVNVDA--SPAEIKKAYYLKARIVHPDKNPGDPK-----AAKNFQVLGEAYQVLSDPEKREAYDKHGK 72 (340)
Q Consensus 5 ~~~Y~iLgv~~~a--s~~eIk~aYr~la~~~HPDk~~~~~~-----a~~~f~~i~~Ay~vLsd~~~R~~YD~~g~ 72 (340)
+|||++|||++++ +..+||++||+++++||||++++.+. +.++|+.|++||+||+||.+|..||....
T Consensus 1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 4899999999999 99999999999999999999987653 55799999999999999999999998654
No 20
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.73 E-value=2.7e-19 Score=172.05 Aligned_cols=70 Identities=36% Similarity=0.552 Sum_probs=0.0
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCC
Q 019516 3 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKE 73 (340)
Q Consensus 3 ~~~~~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vLsd~~~R~~YD~~g~~ 73 (340)
...|||++|||+++||.++||+|||+++++||||+++ ++.|.++|++|++||++|+||.+|+.||.++..
T Consensus 26 ~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~-~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 95 (329)
T 3lz8_A 26 ELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSK-ENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQH 95 (329)
T ss_dssp -----------------------------------------------------------------------
T ss_pred cccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCC-ChHHHHHHHHHHHHHHHhhhhhhhcccchhhcc
Confidence 3479999999999999999999999999999999997 457889999999999999999999999998543
No 21
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.72 E-value=3.5e-18 Score=147.37 Aligned_cols=70 Identities=24% Similarity=0.509 Sum_probs=63.7
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh------HHHHHHHHHHHHHHHcCChhHHHHHhhcCC
Q 019516 3 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDP------KAAKNFQVLGEAYQVLSDPEKREAYDKHGK 72 (340)
Q Consensus 3 ~~~~~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~------~a~~~f~~i~~Ay~vLsd~~~R~~YD~~g~ 72 (340)
...|||+||||+++++.++||+|||++++++|||++++.+ .+.+.|+.|++||++|+||.+|+.||..+.
T Consensus 8 ~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 8 PKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred CCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 3568999999999999999999999999999999998653 367899999999999999999999998653
No 22
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=2.6e-18 Score=135.19 Aligned_cols=62 Identities=32% Similarity=0.437 Sum_probs=57.8
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHH
Q 019516 3 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKRE 65 (340)
Q Consensus 3 ~~~~~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vLsd~~~R~ 65 (340)
...+||+||||+++++.++||++||+++++||||+++ ++.+.++|+.|++||++|+||.+|.
T Consensus 25 ~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~ 86 (90)
T 2ys8_A 25 NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCV-APGSEDAFKAVVNARTALLKNIKSG 86 (90)
T ss_dssp TCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCC-CTTHHHHHHHHHHHHHHHHHHHCCS
T ss_pred cCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCccccc
Confidence 4679999999999999999999999999999999997 4678899999999999999998875
No 23
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.70 E-value=5e-17 Score=146.57 Aligned_cols=69 Identities=26% Similarity=0.470 Sum_probs=61.5
Q ss_pred CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHHcCChhHHHHHhh--cCC
Q 019516 4 DTAYYDVLGVNVD--ASPAEIKKAYYLKARIVHPDKNPGDPK-----AAKNFQVLGEAYQVLSDPEKREAYDK--HGK 72 (340)
Q Consensus 4 ~~~~Y~iLgv~~~--as~~eIk~aYr~la~~~HPDk~~~~~~-----a~~~f~~i~~Ay~vLsd~~~R~~YD~--~g~ 72 (340)
..|||++|||+++ ++..+||++||+++++||||++++.+. +.++|+.|++||+||+||.+|..||. +|.
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l~G~ 119 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLHGI 119 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTTC
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhcCC
Confidence 5799999999986 789999999999999999999986543 56789999999999999999999985 454
No 24
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.69 E-value=6.6e-19 Score=144.53 Aligned_cols=85 Identities=21% Similarity=0.319 Sum_probs=69.7
Q ss_pred CCcccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCCCCCccc
Q 019516 5 TAYYDVLGVNVDASP--AEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQDSMVD 82 (340)
Q Consensus 5 ~~~Y~iLgv~~~as~--~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vLsd~~~R~~YD~~g~~~~~~~~~~d 82 (340)
.+||+||||+++|+. .+||+|||++++++|||++++ .++|++|++||+||+||.+|+.||.+|.......
T Consensus 8 ~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~~~~w~~~~---- 79 (114)
T 1gh6_A 8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGGFWDATE---- 79 (114)
T ss_dssp HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSCCCCCCC----
T ss_pred hhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhccccccccc----
Confidence 579999999999999 999999999999999999974 3689999999999999999999999885321111
Q ss_pred hhhhhhhcccCchHHhHHhH
Q 019516 83 AAAVFGMIFGSEYFEDYIGQ 102 (340)
Q Consensus 83 ~~~~f~~~fg~~~f~~~~g~ 102 (340)
...||...|.+|.+.
T Consensus 80 -----~~~~g~p~w~~w~~~ 94 (114)
T 1gh6_A 80 -----IPTYGTDEWEQWWNA 94 (114)
T ss_dssp -----CCCCSSSCHHHHHHH
T ss_pred -----CCCCCCchHHHHHhc
Confidence 134566667777433
No 25
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.66 E-value=3.9e-17 Score=125.46 Aligned_cols=65 Identities=17% Similarity=0.256 Sum_probs=58.0
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCC
Q 019516 5 TAYYDVLGVNVD--ASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEG 74 (340)
Q Consensus 5 ~~~Y~iLgv~~~--as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vLsd~~~R~~YD~~g~~~ 74 (340)
.++|++|||+++ ++.++||++||+++++||||+++ + .++|++|++||++|+||.+|.. +.||..+
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~-~---~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~ 77 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG-S---HALMQELNSLWGTFKTEVYNLR-MNLGGTG 77 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC-C---HHHHHHHHHHHHHHHHHHHHHT-TCCSSCC
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC-C---HHHHHHHHHHHHHHhhHHHHHH-HhcCCcc
Confidence 368999999999 99999999999999999999985 3 4789999999999999999988 5577654
No 26
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.65 E-value=7.9e-18 Score=147.40 Aligned_cols=64 Identities=25% Similarity=0.379 Sum_probs=57.3
Q ss_pred CCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCC
Q 019516 5 TAYYDVLGVNVDAS--PAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGK 72 (340)
Q Consensus 5 ~~~Y~iLgv~~~as--~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vLsd~~~R~~YD~~g~ 72 (340)
.+||++|||+++|+ .++||+|||++++++|||++++ .++|++|++||++|+||.+|+.||++|.
T Consensus 11 ~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 11 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 58999999999998 6999999999999999999974 2689999999999999999999999996
No 27
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.63 E-value=5.7e-17 Score=127.06 Aligned_cols=60 Identities=23% Similarity=0.160 Sum_probs=55.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHHHHHHHcCChhHH
Q 019516 5 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDP-KAAKNFQVLGEAYQVLSDPEKR 64 (340)
Q Consensus 5 ~~~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~-~a~~~f~~i~~Ay~vLsd~~~R 64 (340)
.++|+||||+++|+.++||+|||+++++||||++++++ .+.++|+.|++||++|+|+..|
T Consensus 16 ~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp HHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 47999999999999999999999999999999998764 4889999999999999998776
No 28
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.62 E-value=4.7e-16 Score=137.40 Aligned_cols=64 Identities=22% Similarity=0.469 Sum_probs=58.7
Q ss_pred CCCccccc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhc
Q 019516 4 DTAYYDVL------GVNV-DASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKH 70 (340)
Q Consensus 4 ~~~~Y~iL------gv~~-~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vLsd~~~R~~YD~~ 70 (340)
..|||++| |+++ +++..+||++||+++++||||++++ +.++|+.|++||+||+||.+|..||..
T Consensus 10 ~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~ 80 (181)
T 3uo3_A 10 TSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLK 80 (181)
T ss_dssp SCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 46999999 4665 8999999999999999999999985 567899999999999999999999983
No 29
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.60 E-value=1.5e-16 Score=125.34 Aligned_cols=56 Identities=27% Similarity=0.459 Sum_probs=51.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---HHHHHHHHHHHHHHHcCC
Q 019516 5 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDP---KAAKNFQVLGEAYQVLSD 60 (340)
Q Consensus 5 ~~~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~---~a~~~f~~i~~Ay~vLsd 60 (340)
.++|++|||+++||.++||+|||+++++|||||+++++ .|.++|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 48999999999999999999999999999999998765 378899999999999964
No 30
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.60 E-value=7.8e-17 Score=170.07 Aligned_cols=75 Identities=41% Similarity=0.740 Sum_probs=40.9
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCCC
Q 019516 3 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQ 77 (340)
Q Consensus 3 ~~~~~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vLsd~~~R~~YD~~g~~~~~~ 77 (340)
.+.|||++|||+++||.++||+|||+++++||||++++++.+.++|++|++||++|+||.+|+.||++|..+...
T Consensus 19 ~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~ 93 (780)
T 3apo_A 19 HDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 93 (780)
T ss_dssp ----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC-------
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhccccccc
Confidence 467999999999999999999999999999999999888889999999999999999999999999999877544
No 31
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.60 E-value=1.3e-16 Score=140.46 Aligned_cols=63 Identities=27% Similarity=0.499 Sum_probs=58.8
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChH---HHHHHHHHHHHHHHcCChhHHHHH
Q 019516 5 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPK---AAKNFQVLGEAYQVLSDPEKREAY 67 (340)
Q Consensus 5 ~~~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~---a~~~f~~i~~Ay~vLsd~~~R~~Y 67 (340)
.+||++|||+++|+.++||+|||+++++||||++++.+. +.+.|+.|++||++|+||.+|..|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 589999999999999999999999999999999986653 789999999999999999999876
No 32
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.58 E-value=5.3e-16 Score=125.63 Aligned_cols=59 Identities=24% Similarity=0.349 Sum_probs=52.4
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---Ch----HHHHHHHHHHHHHHHcCChh
Q 019516 3 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPG---DP----KAAKNFQVLGEAYQVLSDPE 62 (340)
Q Consensus 3 ~~~~~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~---~~----~a~~~f~~i~~Ay~vLsd~~ 62 (340)
.+.+||++||+++ ||.++||+|||+++++|||||+++ ++ .|.++|+.|++||++|+||.
T Consensus 39 ~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 39 SGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 3579999999996 999999999999999999999873 12 36889999999999999985
No 33
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.51 E-value=2.5e-15 Score=113.00 Aligned_cols=56 Identities=18% Similarity=0.164 Sum_probs=50.5
Q ss_pred CCcccccCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHH
Q 019516 5 TAYYDVLGVNV-DASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKR 64 (340)
Q Consensus 5 ~~~Y~iLgv~~-~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vLsd~~~R 64 (340)
.++|+||||++ +++.++||++||++++++|||+++ ++ +.|++|++||++|+|+..|
T Consensus 14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g-~~---~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGG-SP---FLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTC-CH---HHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CH---HHHHHHHHHHHHHhhhhhc
Confidence 47999999999 799999999999999999999974 44 5899999999999998655
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.93 E-value=4.8e-10 Score=107.37 Aligned_cols=65 Identities=43% Similarity=0.613 Sum_probs=55.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---HHHHHHHHHHHHHHHcCChhHHHHHhh
Q 019516 5 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDP---KAAKNFQVLGEAYQVLSDPEKREAYDK 69 (340)
Q Consensus 5 ~~~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~---~a~~~f~~i~~Ay~vLsd~~~R~~YD~ 69 (340)
.++|.+||++++++.++|+++|+++++++|||+.+..+ .+.+.|+.|++||++|+||++|..||.
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 48999999999999999999999999999999997542 378899999999999999999999997
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.55 E-value=6.3e-08 Score=71.15 Aligned_cols=50 Identities=10% Similarity=0.009 Sum_probs=43.9
Q ss_pred cccccCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCC
Q 019516 7 YYDVLGVNVD---ASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSD 60 (340)
Q Consensus 7 ~Y~iLgv~~~---as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vLsd 60 (340)
=|.||||+++ ++.++|+++||+|....|||+.. ++ -....|++|+++|..
T Consensus 6 A~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGG-S~---yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 6 SCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGG-SF---YLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTC-CH---HHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCC-CH---HHHHHHHHHHHHHHH
Confidence 4789999999 99999999999999999999974 44 567889999999864
No 36
>2qzg_A Conserved uncharacterized archaeal protein; unknown function protein, structu genomics, PSI-2, protein structure initiative; 2.09A {Methanococcus maripaludis S2} SCOP: a.29.14.1
Probab=34.63 E-value=17 Score=27.88 Aligned_cols=41 Identities=12% Similarity=0.278 Sum_probs=24.5
Q ss_pred HHHHhHHHHHHHHHHHH---HHhcCCCCCCHHHHHHHHHHHHHH
Q 019516 268 LWQINVVDIETTLSRVC---QAVLKDPSVSKETLKLRAKALKKL 308 (340)
Q Consensus 268 ~w~~~~~DIe~Tvr~Vc---~kVL~D~~V~~~~R~~RA~aL~~L 308 (340)
++..-+.+-+.++++++ +.+.+|.+||...|+.=-++...|
T Consensus 4 ~~~~~~~e~e~~ik~~~~~L~~I~~D~sVPRNIRraA~ea~~~L 47 (94)
T 2qzg_A 4 MFSAKKLSPADKLKNISSMLEEIVEDTTVPRNIRAAADNAKNAL 47 (94)
T ss_dssp ---CCCCCHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHT
T ss_pred chhhhhcchHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHH
Confidence 33334444555555544 455678888888888777766555
No 37
>1ny9_A Transcriptional activator TIPA-S; all alpha, globin like; NMR {Streptomyces lividans} SCOP: a.181.1.1
Probab=31.38 E-value=88 Score=25.01 Aligned_cols=53 Identities=23% Similarity=0.184 Sum_probs=30.6
Q ss_pred CCCCCCCHH-HHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCC
Q 019516 12 GVNVDASPA-EIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGK 72 (340)
Q Consensus 12 gv~~~as~~-eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vLsd~~~R~~YD~~g~ 72 (340)
|++|+.... +|-..++.....+.++.. + +.|..|.+-| +.||.-+..||++|.
T Consensus 71 g~~p~s~eaq~l~~~h~~~l~~~~~~~s---~---e~~~~L~~mY--v~D~rF~~~~d~~~~ 124 (143)
T 1ny9_A 71 GEPADSEGAMDAAEDHRQGIARNHYDCG---Y---EMHTCLGEMY--VSDERFTRNIDAAKP 124 (143)
T ss_dssp TCCTTCHHHHHHHHHHHHHHHHHSSCCC---H---HHHHHHHHHT--TSTHHHHHHHGGGST
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCCCCC---H---HHHHHHHHHH--hcCHHHHHhHcccCh
Confidence 455544322 344445555434344432 2 4577777776 478888888988753
No 38
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=30.70 E-value=1.1e+02 Score=22.34 Aligned_cols=53 Identities=9% Similarity=0.141 Sum_probs=37.9
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCh--HHHHHHHHHHHHHHHcCC-hhHHHHHhhc
Q 019516 17 ASPAEIKKAYYLKARIVHPDKNPGDP--KAAKNFQVLGEAYQVLSD-PEKREAYDKH 70 (340)
Q Consensus 17 as~~eIk~aYr~la~~~HPDk~~~~~--~a~~~f~~i~~Ay~vLsd-~~~R~~YD~~ 70 (340)
.-...++.+|+.+.+...|...+... .+...|..-. +|..+.+ ..++..|+.|
T Consensus 6 ~r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~eR~~lFeeY 61 (77)
T 2cqn_A 6 SGMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLESERKRIFKDF 61 (77)
T ss_dssp CSHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHHHHHHHHHHH
Confidence 34567889999999888787766442 4556666644 7999977 4677777765
No 39
>1ceu_A Protein (HIV-1 regulatory protein N-terminal domain VPR); helical domain, amphipaticity, viral protein; NMR {Synthetic} SCOP: j.11.1.1 PDB: 1fi0_A
Probab=29.06 E-value=74 Score=21.55 Aligned_cols=29 Identities=17% Similarity=0.233 Sum_probs=25.0
Q ss_pred hHHHHHHHHHHHHHhcCcchHHHHHHHHH
Q 019516 159 DEFVKWANAEARRLSGAAFGEAMLHTIGY 187 (340)
Q Consensus 159 ~~~~~~~~~E~~~L~~~sfG~~iL~~IG~ 187 (340)
+.|...+..|++.=+.-.|...+|+.+|.
T Consensus 16 ~eW~le~LeElk~EAvrHFpr~~L~~lgq 44 (51)
T 1ceu_A 16 NDWTLELLEELKNEAVRHFPRIWLHSLGQ 44 (51)
T ss_dssp SHHHHHHHHHHHHHTTTSCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 46777788888888889999999999985
No 40
>3cjl_A Domain of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Pectobacterium atrosepticum SCRI1043}
Probab=25.50 E-value=1.3e+02 Score=22.66 Aligned_cols=36 Identities=14% Similarity=0.183 Sum_probs=29.1
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhchh
Q 019516 282 RVCQAVLKDPSVSKETLKLRAKALKKLGTIFQGAKA 317 (340)
Q Consensus 282 ~Vc~kVL~D~~V~~~~R~~RA~aL~~LG~if~~~~~ 317 (340)
.+.++|=.+.+.+.++...=|-||+++|.+|.+-..
T Consensus 32 ~Ive~~~~~~~~~~~~a~af~vGLKLfgevml~~r~ 67 (88)
T 3cjl_A 32 KLLEKVDGKMDMTPEQTQAFMVGLKLFGEVMMQQRK 67 (88)
T ss_dssp HHHHHHTTTSSSCHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCcC
Confidence 344555566778999999999999999999987654
No 41
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=21.35 E-value=1.7e+02 Score=20.34 Aligned_cols=49 Identities=20% Similarity=0.257 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCChHHHHHHHHH---HHHHHHcCC-hh-HHHHHhhcC
Q 019516 20 AEIKKAYYLKARIVHPDKNPGDPKAAKNFQVL---GEAYQVLSD-PE-KREAYDKHG 71 (340)
Q Consensus 20 ~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i---~~Ay~vLsd-~~-~R~~YD~~g 71 (340)
+|-..+|.+|.+...=|..-. -++....| ..-|.+|.| |. ++..|+.|-
T Consensus 3 eEae~aF~~lL~~~~V~s~ws---weqamr~i~i~DPrY~al~d~~~eRK~~Fe~Y~ 56 (59)
T 2b7e_A 3 MEAEKEFITMLKENQVDSTWS---FSRIISELGTRDPRYWMVDDDPLWKKEMFEKYL 56 (59)
T ss_dssp THHHHHHHHHHHHTTCCSSCC---HHHHHHHHHHHCTHHHHSCCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCCc---HHHHHHHhccCCCccccccCCHHHHHHHHHHHH
Confidence 467889999988876554432 33444445 357999997 65 777888773
No 42
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=21.22 E-value=1.6e+02 Score=25.12 Aligned_cols=47 Identities=23% Similarity=0.271 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHhchhcccc
Q 019516 275 DIETTLSRVCQAV---LKDPSVSKETLKLRAKALKKLGTIFQGAKAAYSR 321 (340)
Q Consensus 275 DIe~Tvr~Vc~kV---L~D~~V~~~~R~~RA~aL~~LG~if~~~~~~~~~ 321 (340)
||...|.++|.=| |+.+.+++..|-+|-.-|..|+.+.....+..++
T Consensus 5 ~~~~l~~~~~~~~~~~l~~e~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~ 54 (211)
T 1u5e_A 5 EIRNLLADVETFVADTLKGENLSKKAKEKRESLIKKIKDVKSVYLQEFQD 54 (211)
T ss_dssp HHHHHHHHHHHHHHTTTTTCBCCHHHHHHHHHHHHHHHHHGGGGTGGGC-
T ss_pred HHHHHHHHHHHHHHHhhcchhcCHHHHHHHHHHHHHHHHHHHhccccccC
Confidence 6777777777766 8899999999999999999999998888776664
No 43
>2qsb_A UPF0147 protein TA0600; structural genomics, four-helix bundle, PSI-2, protein structure initiative; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728} SCOP: a.29.14.1
Probab=20.69 E-value=1.8e+02 Score=21.88 Aligned_cols=26 Identities=23% Similarity=0.286 Sum_probs=19.9
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHH
Q 019516 283 VCQAVLKDPSVSKETLKLRAKALKKL 308 (340)
Q Consensus 283 Vc~kVL~D~~V~~~~R~~RA~aL~~L 308 (340)
+-+.+.+|.+||...|+.=.++...|
T Consensus 18 ~L~~I~~D~sVPRNIRraA~ea~~~L 43 (89)
T 2qsb_A 18 LLDELSQDITVPKNVRKVAQDSKAKL 43 (89)
T ss_dssp HHHHHHTCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCChHHHHHHHHHHHHH
Confidence 45567788999998888777777665
Done!