BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019518
(340 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q66HG4|GALM_RAT Aldose 1-epimerase OS=Rattus norvegicus GN=Galm PE=1 SV=1
Length = 342
Score = 301 bits (770), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 153/332 (46%), Positives = 214/332 (64%), Gaps = 11/332 (3%)
Query: 9 EVFELNNGSMQVKITNYGAIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAPFFGCIVGR 68
E F+L + + V I ++G IT+L V D+ G +DVVLGF +E Y++ P+FG +VGR
Sbjct: 20 EKFQLRSDQLNVDIISWGCTITALQVKDRQGKASDVVLGFAELEGYLQ-KQPYFGAVVGR 78
Query: 69 VANRIKDGKFSLDGVEYTLPINKPPNSLHGGFKGFDKVVWEVAEYKKGENPSITFKYRSR 128
VANRI G+F++DG EY LPIN+ PNSLHGGF+GFDKV+W G + F S
Sbjct: 79 VANRIAKGRFTVDGKEYHLPINREPNSLHGGFRGFDKVLWTPQVLSNG----VQFSRVSP 134
Query: 129 DGEEGYPGDVSVMATYTLTSSTTMRLDMEAVPENKPTPISLAQHTYWNLAGHHSGNILDH 188
DGEEGYPG++ V TYTL + ++ A ++ TP++L H+Y+NLAG S +I DH
Sbjct: 135 DGEEGYPGELKVWVTYTLDGG-ELVVNYRA-QASQTTPVNLTNHSYFNLAGQGSPDIYDH 192
Query: 189 SIQIWGSHITPVDQNTVPTGEIMPVKGTPFDFTTEKKIGASINEVPGLGYDHNYVLDCGE 248
+ I PVD+ +PTG I PV+GT FD ++G + G+DHN+ L +
Sbjct: 193 EVTIAADAYLPVDETLIPTGVIAPVEGTAFDLRKPVELGKHLQSYHIHGFDHNFCLKESK 252
Query: 249 EKSGLKHAAKLKEPSTSRVLNLWTNAPGMQFYTGNYVNGVV-GKGGAVYGKHSGVCLETQ 307
EK K A++ ++ R+L ++T PG+QFYTGN+++G + GK G VY KHSG CLETQ
Sbjct: 253 EK---KFCARVHHAASGRILEVYTTQPGVQFYTGNFLDGTLKGKSGEVYPKHSGFCLETQ 309
Query: 308 GFPNAINQPNFPSVVVRPGESYQHTMLFEFSV 339
+P+A+NQP FP +++RPGE Y HT F+FSV
Sbjct: 310 NWPDAVNQPQFPPILLRPGEEYNHTTWFKFSV 341
>sp|Q9GKX6|GALM_PIG Aldose 1-epimerase OS=Sus scrofa GN=GALM PE=2 SV=1
Length = 342
Score = 300 bits (769), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 157/332 (47%), Positives = 213/332 (64%), Gaps = 11/332 (3%)
Query: 9 EVFELNNGSMQVKITNYGAIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAPFFGCIVGR 68
E F+L + ++V I ++G IT+L V D+ G +DVVLGF ++ Y++ P+FG +VGR
Sbjct: 20 EKFQLQSDQLRVDIISWGCTITALEVKDRQGRASDVVLGFAELKEYLQ-KHPYFGAVVGR 78
Query: 69 VANRIKDGKFSLDGVEYTLPINKPPNSLHGGFKGFDKVVWEVAEYKKGENPSITFKYRSR 128
VANRI G F+LDG EY L IN PNSLHGG +GFDKV+W G I F S
Sbjct: 79 VANRIAKGTFTLDGKEYKLAINNGPNSLHGGVRGFDKVLWTPRVLSNG----IEFSRVSP 134
Query: 129 DGEEGYPGDVSVMATYTLTSSTTMRLDMEAVPENKPTPISLAQHTYWNLAGHHSGNILDH 188
DGEEGYPG++ V TYTL + ++ A ++ TP++L H+Y+NLAG S NI DH
Sbjct: 135 DGEEGYPGELKVWVTYTLDGGE-LVVNYRA-QASQTTPVNLTNHSYFNLAGQGSPNIYDH 192
Query: 189 SIQIWGSHITPVDQNTVPTGEIMPVKGTPFDFTTEKKIGASINEVPGLGYDHNYVLDCGE 248
+ I PVD+ +PTGEI PV+GT FD ++G + E G+DHN+ L +
Sbjct: 193 EVTIEADAFLPVDETLIPTGEIAPVQGTAFDLRKPVELGKHLQEFHINGFDHNFCLKRSK 252
Query: 249 EKSGLKHAAKLKEPSTSRVLNLWTNAPGMQFYTGNYVNGVV-GKGGAVYGKHSGVCLETQ 307
EK + A++ + RVL ++T PG+QFYTGN+++G + GK GAVY KHSG CLETQ
Sbjct: 253 EK---QFCARVHHAGSGRVLEVYTTQPGIQFYTGNFLDGTLKGKTGAVYPKHSGFCLETQ 309
Query: 308 GFPNAINQPNFPSVVVRPGESYQHTMLFEFSV 339
+PNA+NQP+FP V+++PGE Y HT F FSV
Sbjct: 310 NWPNAVNQPHFPPVLLKPGEEYNHTTWFVFSV 341
>sp|Q8K157|GALM_MOUSE Aldose 1-epimerase OS=Mus musculus GN=Galm PE=2 SV=1
Length = 342
Score = 300 bits (767), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 152/332 (45%), Positives = 215/332 (64%), Gaps = 11/332 (3%)
Query: 9 EVFELNNGSMQVKITNYGAIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAPFFGCIVGR 68
E F+L + + V I ++G IT+L V D+ G +DVVLGF +E Y++ P+FG +VGR
Sbjct: 20 EKFQLRSDQLSVDIISWGCTITALQVKDRQGKASDVVLGFAELEGYLQ-KQPYFGAVVGR 78
Query: 69 VANRIKDGKFSLDGVEYTLPINKPPNSLHGGFKGFDKVVWEVAEYKKGENPSITFKYRSR 128
VANRI G+F++ G EY LP+N+ PNSLHGGF GFDKV+W G + F S
Sbjct: 79 VANRIAKGRFTIGGKEYHLPVNREPNSLHGGFTGFDKVLWTPQVLTNG----VQFFRVSP 134
Query: 129 DGEEGYPGDVSVMATYTLTSSTTMRLDMEAVPENKPTPISLAQHTYWNLAGHHSGNILDH 188
DGEEGYPG++ V TYTL + ++ A ++ TP++L H+Y+NLAG S NI DH
Sbjct: 135 DGEEGYPGELKVWVTYTLDGG-ELVINYRA-QASQTTPVNLTNHSYFNLAGQGSPNIYDH 192
Query: 189 SIQIWGSHITPVDQNTVPTGEIMPVKGTPFDFTTEKKIGASINEVPGLGYDHNYVLDCGE 248
+ I PVD+ +PTG I PV+GT FD ++G + + G+DHN+ L +
Sbjct: 193 EVTIAADAYLPVDETLIPTGVIAPVEGTAFDLRKPVELGTHLQDYHIHGFDHNFCLKESK 252
Query: 249 EKSGLKHAAKLKEPSTSRVLNLWTNAPGMQFYTGNYVNGVV-GKGGAVYGKHSGVCLETQ 307
EK K A+++ ++ R+L ++T PG+QFYTGN+++G + GK GAVY KHSG+CLETQ
Sbjct: 253 EK---KFCARVRHAASGRILEVYTTQPGVQFYTGNFLDGTLKGKNGAVYPKHSGLCLETQ 309
Query: 308 GFPNAINQPNFPSVVVRPGESYQHTMLFEFSV 339
+P+++NQP FP ++RPGE Y HT F+FSV
Sbjct: 310 NWPDSVNQPQFPPALLRPGEEYNHTTWFKFSV 341
>sp|Q96C23|GALM_HUMAN Aldose 1-epimerase OS=Homo sapiens GN=GALM PE=1 SV=1
Length = 342
Score = 299 bits (765), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/332 (46%), Positives = 213/332 (64%), Gaps = 11/332 (3%)
Query: 9 EVFELNNGSMQVKITNYGAIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAPFFGCIVGR 68
E F+L + ++V I ++G IT+L V D+ G +DVVLGF +E Y++ P+FG ++GR
Sbjct: 20 EKFQLQSDLLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQ-KQPYFGAVIGR 78
Query: 69 VANRIKDGKFSLDGVEYTLPINKPPNSLHGGFKGFDKVVWEVAEYKKGENPSITFKYRSR 128
VANRI G F +DG EY L INK PNSLHGG +GFDKV+W G + F S
Sbjct: 79 VANRIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLWTPRVLSNG----VQFSRISP 134
Query: 129 DGEEGYPGDVSVMATYTLTSSTTMRLDMEAVPENKPTPISLAQHTYWNLAGHHSGNILDH 188
DGEEGYPG++ V TYTL + ++ A ++ TP++L H+Y+NLAG S NI DH
Sbjct: 135 DGEEGYPGELKVWVTYTLDGGELI-VNYRA-QASQATPVNLTNHSYFNLAGQASPNINDH 192
Query: 189 SIQIWGSHITPVDQNTVPTGEIMPVKGTPFDFTTEKKIGASINEVPGLGYDHNYVLDCGE 248
+ I PVD+ +PTGE+ PV+GT FD ++G + + G+DHN+ L +
Sbjct: 193 EVTIEADTYLPVDETLIPTGEVAPVQGTAFDLRKPVELGKHLQDFHLNGFDHNFCLKGSK 252
Query: 249 EKSGLKHAAKLKEPSTSRVLNLWTNAPGMQFYTGNYVNGVV-GKGGAVYGKHSGVCLETQ 307
EK A++ ++ RVL ++T PG+QFYTGN+++G + GK GAVY KHSG CLETQ
Sbjct: 253 EK---HFCARVHHAASGRVLEVYTTQPGVQFYTGNFLDGTLKGKNGAVYPKHSGFCLETQ 309
Query: 308 GFPNAINQPNFPSVVVRPGESYQHTMLFEFSV 339
+P+A+NQP FP V++RPGE Y HT F+FSV
Sbjct: 310 NWPDAVNQPRFPPVLLRPGEEYDHTTWFKFSV 341
>sp|Q5R8U1|GALM_PONAB Aldose 1-epimerase OS=Pongo abelii GN=GALM PE=2 SV=1
Length = 342
Score = 297 bits (761), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 154/332 (46%), Positives = 212/332 (63%), Gaps = 11/332 (3%)
Query: 9 EVFELNNGSMQVKITNYGAIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAPFFGCIVGR 68
E F+L + ++V I ++G IT+L V D+ G +DVVLGF +E Y++ P+FG ++GR
Sbjct: 20 EKFQLQSDLLRVDIISWGCTITALEVKDRQGRSSDVVLGFAELEGYLQ-KQPYFGAVIGR 78
Query: 69 VANRIKDGKFSLDGVEYTLPINKPPNSLHGGFKGFDKVVWEVAEYKKGENPSITFKYRSR 128
VANRI G F +DG EY L INK PNSLHGG +GFDKV+W G I F S
Sbjct: 79 VANRIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLWTPRVLSNG----IQFSRISP 134
Query: 129 DGEEGYPGDVSVMATYTLTSSTTMRLDMEAVPENKPTPISLAQHTYWNLAGHHSGNILDH 188
DGEEGYPG++ V TYTL + ++ A ++ TP++L H+Y+NLAG S NI DH
Sbjct: 135 DGEEGYPGELKVWVTYTLDGGELV-VNYRA-QASQATPVNLTNHSYFNLAGQGSPNIYDH 192
Query: 189 SIQIWGSHITPVDQNTVPTGEIMPVKGTPFDFTTEKKIGASINEVPGLGYDHNYVLDCGE 248
+ I PVD+ +PTGE+ PV+GT FD ++G + + G+DHN+ L +
Sbjct: 193 EVTIEADTYLPVDETLIPTGEVAPVQGTAFDLRKPVELGKHLQDFHLNGFDHNFCLKGSK 252
Query: 249 EKSGLKHAAKLKEPSTSRVLNLWTNAPGMQFYTGNYVNGVV-GKGGAVYGKHSGVCLETQ 307
EK A++ ++ RVL ++T PG+QFY GN+++G + GK GAVY KHSG CLETQ
Sbjct: 253 EK---HFCARVHHAASGRVLEVYTTQPGVQFYMGNFLDGTLKGKNGAVYPKHSGFCLETQ 309
Query: 308 GFPNAINQPNFPSVVVRPGESYQHTMLFEFSV 339
+P+A+NQP FP V++RPGE Y HT F+FSV
Sbjct: 310 NWPDAVNQPRFPPVLLRPGEEYDHTTWFKFSV 341
>sp|Q5EA79|GALM_BOVIN Aldose 1-epimerase OS=Bos taurus GN=GALM PE=2 SV=1
Length = 342
Score = 297 bits (760), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 155/332 (46%), Positives = 212/332 (63%), Gaps = 11/332 (3%)
Query: 9 EVFELNNGSMQVKITNYGAIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAPFFGCIVGR 68
E F+L + ++V I ++G IT+L V D+ G +DVVLGFD +E Y++ P+FG +VGR
Sbjct: 20 EKFQLQSDQLRVDIISWGCTITALEVKDRQGRASDVVLGFDELEGYLQ-KQPYFGAVVGR 78
Query: 69 VANRIKDGKFSLDGVEYTLPINKPPNSLHGGFKGFDKVVWEVAEYKKGENPSITFKYRSR 128
VANRI G F+LDG EY L IN PNSLHGG KGFDKV+W G + F S
Sbjct: 79 VANRIAKGTFTLDGKEYKLAINNGPNSLHGGVKGFDKVLWTPRVLSNG----VEFSRVSP 134
Query: 129 DGEEGYPGDVSVMATYTLTSSTTMRLDMEAVPENKPTPISLAQHTYWNLAGHHSGNILDH 188
DGEEGYPG++ V YTL + ++ A ++ TP++L H+Y+NLAG S NI DH
Sbjct: 135 DGEEGYPGELKVWVMYTLDGG-ELVVNYRA-QASQTTPVNLTNHSYFNLAGQGSPNIYDH 192
Query: 189 SIQIWGSHITPVDQNTVPTGEIMPVKGTPFDFTTEKKIGASINEVPGLGYDHNYVLDCGE 248
+ I PVD+ +PTGEI V+GT FD ++G + E G+DHN+ L +
Sbjct: 193 EVTIEADAFLPVDEVLIPTGEIASVQGTAFDLRKPVELGKHLQEFHVNGFDHNFCLKGSK 252
Query: 249 EKSGLKHAAKLKEPSTSRVLNLWTNAPGMQFYTGNYVNGVV-GKGGAVYGKHSGVCLETQ 307
EK + A++ + RVL ++T PG+QFYTGN+++G + GK GA Y KHSG CLETQ
Sbjct: 253 EK---RFCARVHHAGSGRVLEVYTTQPGVQFYTGNFLDGTLKGKSGAGYPKHSGFCLETQ 309
Query: 308 GFPNAINQPNFPSVVVRPGESYQHTMLFEFSV 339
+P+A+NQP+FP V+++PGE Y HT F+FSV
Sbjct: 310 SWPDAVNQPHFPPVLLKPGEEYDHTTWFKFSV 341
>sp|P05149|GALM_ACICA Aldose 1-epimerase OS=Acinetobacter calcoaceticus GN=mro PE=1 SV=1
Length = 381
Score = 230 bits (587), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/339 (37%), Positives = 191/339 (56%), Gaps = 14/339 (4%)
Query: 14 NNGSMQVKITNYGAIITSLSVPDKHGNWADVVLGFDSVEPYV---KGAAPFFGCIVGRVA 70
NN + V ++G +IT + PD G ++VLGFD ++ Y FG ++GR A
Sbjct: 44 NNNGVSVSFISFGGVITQILTPDAQGKQNNIVLGFDDLKGYEVTDTKEGIHFGGLIGRYA 103
Query: 71 NRIKDGKFSLDGVEYTLPINKPPNSLHGGFKGFDKVVWEVAEY-KKGENPSITFKYRSRD 129
NRI + KFSLDG Y L N PNSLH G GFDK VW+V KGE + K S +
Sbjct: 104 NRIGNAKFSLDGKTYNLEKNNGPNSLHSGNPGFDKRVWQVKPLVSKGETVKASLKLTSPN 163
Query: 130 GEEGYPGDVSVMATYTLTSSTTMRLDMEAVPENKPTPISLAQHTYWNL--AGHHSGNILD 187
G++G+PG + V Y+L+ +++ +A ++PT ++L H+Y+NL AG++ +LD
Sbjct: 164 GDQGFPGKLDVEVIYSLSDQNEFKIEYKA-KTDQPTVVNLTNHSYFNLSGAGNNPYGVLD 222
Query: 188 HSIQIWGSHITPVDQNTVPTGEIMPVKGTPFDFTTEKKIGASINE-----VPGLGYDHNY 242
H +Q+ I DQN++PTGEI V GTPFDF K I I G GYD +
Sbjct: 223 HVVQLNAGRILVTDQNSLPTGEIASVAGTPFDFRMPKAIVKDIRANNQQLAYGYGYDQTW 282
Query: 243 VLDCGEEKSGLKHAAKLKEPSTSRVLNLWTNAPGMQFYTGNYVNG-VVGKGGAVYGKHSG 301
V++ + + L AA + +P + R + + T P +Q YT +++ G +VG G +Y +
Sbjct: 283 VINQ-KSQGKLNLAAIVVDPKSKRTMQVLTTEPSVQMYTADHLLGNIVGANGVLYRQADA 341
Query: 302 VCLETQGFPNAINQPNFPSVVVRPGESYQHTMLFEFSVE 340
+ LETQ FP++ NQP FPS + P ++Y +F+F V+
Sbjct: 342 LALETQHFPDSPNQPTFPSTRLNPNQTYNSVTVFKFGVQ 380
>sp|P0A9C4|GALM_SHIFL Aldose 1-epimerase OS=Shigella flexneri GN=galM PE=3 SV=1
Length = 346
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 171/333 (51%), Gaps = 14/333 (4%)
Query: 14 NNGSMQVKITNYGAIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAPFFGCIVGRVANRI 73
NN M V + ++GA + S +P G+ + +LG S E Y AA F G +GR ANRI
Sbjct: 22 NNAGMVVTLMDWGATLLSARIPLSDGSVREALLGCASPECYQDQAA-FLGASIGRYANRI 80
Query: 74 KDGKFSLDGVEYTLPINKPPNSLHGGFKGFDKVVWEVAEYKKGENPSITFKYRSRDGEEG 133
+ +++ DG TL ++ N LHGG +GFDK W++ + + F S DG++G
Sbjct: 81 ANSRYTFDGETVTLSPSQGVNQLHGGPEGFDKRRWQIVNQNDRQ---VLFALSSDDGDQG 137
Query: 134 YPGDVSVMATYTLTSSTTMRLDMEAVPENKPTPISLAQHTYWNLAGHHSGNILDHSIQIW 193
+PG++ Y LT + + A + KP P+++ H Y+NL G S ++ +H +QI
Sbjct: 138 FPGNLGATVQYRLTDDNRISITYRATVD-KPCPVNMTNHVYFNLDGEQS-DVRNHKLQIL 195
Query: 194 GSHITPVDQNTVPTGEIMPVKGTPFDFTTEKKIG----ASINEVPGLGYDHNYVLDCGEE 249
PVD+ +P + V GT FDF + K I A ++ GYDH ++L +
Sbjct: 196 ADEYLPVDEGGIPHDGLKSVAGTSFDFRSAKIIASEFLADDDQRKVKGYDHAFLLQA--K 253
Query: 250 KSGLKHAAKLKEPSTSRVLNLWTNAPGMQFYTGNYVNGVVGKGGAVYGKHSGVCLETQGF 309
G K AA + L ++T AP +QFY+GN++ G +G Y G+ LE++
Sbjct: 254 GDGKKVAAHVWSADEKLQLKVYTTAPALQFYSGNFLGGTPSRGTEPYADWQGLALESEFL 313
Query: 310 PNAINQPNFPS--VVVRPGESYQHTMLFEFSVE 340
P++ N P +P +RPGE Y ++F E
Sbjct: 314 PDSPNHPEWPQPDCFLRPGEEYSSLTEYQFIAE 346
>sp|P0A9C3|GALM_ECOLI Aldose 1-epimerase OS=Escherichia coli (strain K12) GN=galM PE=1
SV=1
Length = 346
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 171/333 (51%), Gaps = 14/333 (4%)
Query: 14 NNGSMQVKITNYGAIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAPFFGCIVGRVANRI 73
NN M V + ++GA + S +P G+ + +LG S E Y AA F G +GR ANRI
Sbjct: 22 NNAGMVVTLMDWGATLLSARIPLSDGSVREALLGCASPECYQDQAA-FLGASIGRYANRI 80
Query: 74 KDGKFSLDGVEYTLPINKPPNSLHGGFKGFDKVVWEVAEYKKGENPSITFKYRSRDGEEG 133
+ +++ DG TL ++ N LHGG +GFDK W++ + + F S DG++G
Sbjct: 81 ANSRYTFDGETVTLSPSQGVNQLHGGPEGFDKRRWQIVNQNDRQ---VLFALSSDDGDQG 137
Query: 134 YPGDVSVMATYTLTSSTTMRLDMEAVPENKPTPISLAQHTYWNLAGHHSGNILDHSIQIW 193
+PG++ Y LT + + A + KP P+++ H Y+NL G S ++ +H +QI
Sbjct: 138 FPGNLGATVQYRLTDDNRISITYRATVD-KPCPVNMTNHVYFNLDGEQS-DVRNHKLQIL 195
Query: 194 GSHITPVDQNTVPTGEIMPVKGTPFDFTTEKKIG----ASINEVPGLGYDHNYVLDCGEE 249
PVD+ +P + V GT FDF + K I A ++ GYDH ++L +
Sbjct: 196 ADEYLPVDEGGIPHDGLKSVAGTSFDFRSAKIIASEFLADDDQRKVKGYDHAFLLQA--K 253
Query: 250 KSGLKHAAKLKEPSTSRVLNLWTNAPGMQFYTGNYVNGVVGKGGAVYGKHSGVCLETQGF 309
G K AA + L ++T AP +QFY+GN++ G +G Y G+ LE++
Sbjct: 254 GDGKKVAAHVWSADEKLQLKVYTTAPALQFYSGNFLGGTPSRGTEPYADWQGLALESEFL 313
Query: 310 PNAINQPNFPS--VVVRPGESYQHTMLFEFSVE 340
P++ N P +P +RPGE Y ++F E
Sbjct: 314 PDSPNHPEWPQPDCFLRPGEEYSSLTEYQFIAE 346
>sp|P31765|GALM_HAEIN Aldose 1-epimerase OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=galM PE=3 SV=2
Length = 340
Score = 158 bits (400), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/330 (32%), Positives = 169/330 (51%), Gaps = 18/330 (5%)
Query: 14 NNGSMQVKITNYGAIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAPFFGCIVGRVANRI 73
N M+V+ ++GA S VP + +V+LG V+ Y + + G VGR ANRI
Sbjct: 22 NENGMRVQFMDWGATWLSCKVP-VNDTLREVLLGC-KVDNYPTHQS-YLGASVGRYANRI 78
Query: 74 KDGKFSLDGVEYTLPINKPPNSLHGGFKGFDKVVWEVAEYKKGENPSITFKYRSRDGEEG 133
+ +F L+G L N+ + LHGG +GFDK W + E GEN + F S DG++G
Sbjct: 79 ANAQFELNGELIKLSSNQGKHQLHGG-EGFDKRRWNIQEC--GEN-FVCFSLHSVDGDQG 134
Query: 134 YPGDVSVMATYTLTSSTTMRLDMEAVPENKPTPISLAQHTYWNLAGHHSG-NILDHSIQI 192
+PG+V V TYTLT +++++ + + K T ++L HTY+NL G ++ +H++++
Sbjct: 135 FPGNVDVSVTYTLTGDNSVKIEYAGMCD-KDTALNLTNHTYFNLENAEQGSDVREHTLRL 193
Query: 193 WGSHITPVDQNTVPTGEIMPVKGTPFDFTTEKKIGASI---NEVPGLGYDHNYVLDCGEE 249
PVD +P + V T FDF K I ++ GYDH+++++
Sbjct: 194 NADFYLPVDNEGIPNSPLKHVVNTSFDFRIAKPIKQDFLQGDQQATKGYDHSFIVN---- 249
Query: 250 KSGLKHAAKLKEPSTSRVLNLWTNAPGMQFYTGNYVNGVVGKGGAVYGKHSGVCLETQGF 309
K+ K L P+ L + T+ +Q YTGNY+ G + G +Y SG+ LETQ
Sbjct: 250 KAWQKPCVLLTSPTGDLSLEVRTSQAALQVYTGNYLAGTPTRNGELYADFSGIALETQCL 309
Query: 310 PNAINQPNFPSV--VVRPGESYQHTMLFEF 337
P+ N P + + + + G Y F+F
Sbjct: 310 PDTPNHPEWQNYGGIQKAGGRYYQWTEFKF 339
>sp|Q9HDU3|GAL10_SCHPO Bifunctional protein gal10 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=gal10 PE=3 SV=1
Length = 713
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 160/328 (48%), Gaps = 39/328 (11%)
Query: 18 MQVKITNYGAIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAPFFGCIVGRVANRIKDGK 77
++V I NYGA++ ++ + ++V GF+ Y PFFG +GR ANRI +G+
Sbjct: 378 LEVSIANYGALVQAVRYKGR-----NLVNGFNDFSRYKLKENPFFGATIGRFANRIANGQ 432
Query: 78 FSLDGVEYTLPINK-PPNSLHGGFKGFDKVVWEVAEYKKGEN-PSITFKYRSRDGEEGYP 135
F +DG YTL N+ +LHGG GFDK + ++ E+ ++ F +DG G+P
Sbjct: 433 FEVDGHLYTLCKNENNKTTLHGGNNGFDKQFFLGPIARQYEDYNTLEFILVDKDGNNGFP 492
Query: 136 GDVSVMATYTLTSSTTMRLDMEAVPENKP---TPISLAQHTYWNLAGHH---SGNILDHS 189
D+ + YT+ +++ +PE T ++L H+YWNLA + G I+ +
Sbjct: 493 SDLETLVKYTIKNNSLEIEYKSVIPEYSKLNVTAVNLTNHSYWNLASPNKTIDGTIIKST 552
Query: 190 IQIWGSHITPVDQNTVPTGEIMPVKGTPFDFTTEKKIGASINEVPGLGYDHNYVLD---- 245
++ + + ++PTG+I+ + D T K+ P + +D+ +++D
Sbjct: 553 TNVY---LKVNSETSLPTGDIVEWQN---DITKPTKLD------PNISFDNCFIVDREAS 600
Query: 246 --CGE-EKSGLKHAAKLKEPSTSRVLNLWTNAPGMQFYTGNYVNGVVGKGGAVYGKHSGV 302
C + K LK+ ++ PS L + T P Q YTG+ G + SG
Sbjct: 601 KFCLDTRKYSLKNIVEVIHPSVPVKLVVSTTEPAFQLYTGD------GNDICEFQSRSGF 654
Query: 303 CLETQGFPNAINQPNFP-SVVVRPGESY 329
C+ET F NA+N + V++R GE Y
Sbjct: 655 CVETGRFINALNNEKWSKQVILRKGEVY 682
>sp|P21955|GALM_STRTR Aldose 1-epimerase OS=Streptococcus thermophilus GN=galM PE=3 SV=1
Length = 348
Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 147/328 (44%), Gaps = 11/328 (3%)
Query: 14 NNGSMQVKITNYGAIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAPFFGC-IVGRVANR 72
NN + + GA + VP + G ++VLGF E Y K C +GRVA R
Sbjct: 23 NNNGVVISTLTTGATLQEFLVPMETGALKNIVLGFSDFEDYYKN--NLCACQSIGRVAGR 80
Query: 73 IKDGKFSLDGVEYTLPINKPPNSLHGGFKGFDKVVWEVAEYKKGENPSITFKYRSRDGEE 132
I ++ + V Y+LP N+ N LHGG KG W + F R +
Sbjct: 81 IGKASYTHNMVLYSLPKNEGDNCLHGGPKGMQVQNWNYVTNLNDDYVETKFIRRLYSSVD 140
Query: 133 GYPGDVSVMATYTLTSSTTMRLDMEAVPENKPTPISLAQHTYWNLAGHHSGNILDHSIQI 192
G+PGDV+V +Y L ++ + + EA + T + H Y+NL+ ++ H +QI
Sbjct: 141 GFPGDVTVSISYRLNNNNRLTILFEAFDVTESTVFNPTNHVYFNLSDKQ--DLSSHELQI 198
Query: 193 WGSHITPVDQNTVPTGEIMPVKGTPFDFTTEKKIGASINEVPGLGYDHNYVLDCGEEKSG 252
+ + +D +PTG+ + V T +DF + I G+D +V+ G
Sbjct: 199 YSDYRLELDSELIPTGQKINVDETNYDFRKTTDLLPRIE--ANNGFDDAFVVGGG-TCDH 255
Query: 253 LKHAAKLKEPSTSRVLNLWTNAPGMQFYTGNYVNGVV---GKGGAVYGKHSGVCLETQGF 309
+K A L + + + +++N G+ +T + + + G + + + +E Q
Sbjct: 256 VKEVAILHDKESGDGIEIFSNRNGLVIFTMDDIEDNIYFARDKGKMAKRREAIAMEAQTL 315
Query: 310 PNAINQPNFPSVVVRPGESYQHTMLFEF 337
P+A+N F +++ G S + + F++
Sbjct: 316 PDAVNHKGFGDIILDKGHSVNYEIGFQY 343
>sp|P40801|GAL10_PACTA Bifunctional protein GAL10 OS=Pachysolen tannophilus GN=GAL10 PE=2
SV=1
Length = 689
Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 159/348 (45%), Gaps = 57/348 (16%)
Query: 15 NGSMQVKITNYGAIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAPFFGCIVGRVANRIK 74
NG +V I+N+GA I + + N + LGFD+++ Y++ PFFG +GRVANRI
Sbjct: 371 NGKFEVSISNHGATIVAAKL-----NGIKLNLGFDNLKGYLREDNPFFGATIGRVANRIS 425
Query: 75 DGKFSLDGVEYTLPINKP-PNSLHGGFKGFDKVVWE---VAEYKKGENPSITFKYRSRDG 130
G ++G Y + +N+ SLHGG G++K + V +K + ++ F DG
Sbjct: 426 KGDLLINGTHYQVGLNELHRTSLHGGTYGYNKRTFLGPIVKTNEKEKETTMEFVLIDLDG 485
Query: 131 EEGYPGDVSVMATYTLTSSTT-----MRLDMEAVPEN--KPTPISLAQHTYWNLAGHHSG 183
EGYPGDV YT+ + + + + + E+ T +SL H+YWN+ S
Sbjct: 486 TEGYPGDVETKVIYTVRDTGVGGELGIEYEAKLLEESGRDSTAVSLTNHSYWNIGNQPS- 544
Query: 184 NILDHSIQIWGSHITPVDQ--------NTVPTGEIMPVKGTPFDFTTEKKIGASINEVPG 235
I G+HI V ++ PTG+I V T D K+G G
Sbjct: 545 --------IEGTHIKLVSNKHLESNPLDSTPTGKI--VTSTDLDSQNSAKLGPD-----G 589
Query: 236 LGYDHNYV------LDCGEEKSGLKHAAKLKEPSTSRVLNLWTNAPGMQFYTGNYVNGVV 289
+D+ +V LD ++ L+ A P T T P QFYTG+ V+ V
Sbjct: 590 PVFDYCFVTKQQDKLDTRNDE--LRVVATATHPKTRIAFTTLTTEPAFQFYTGDGVD-VA 646
Query: 290 GKGGAVYGKHSGVCLETQGFPNAINQPNFPSVVVRPGESYQHTMLFEF 337
G V+ K SG CLE + I P + + + GE Y ++ F
Sbjct: 647 G----VFTKRSGFCLEASRY---IYNPKW-FIPLNKGEVYGSYTIYRF 686
>sp|P04397|GAL10_YEAST Bifunctional protein GAL10 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=GAL10 PE=1 SV=2
Length = 699
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 150/336 (44%), Gaps = 35/336 (10%)
Query: 18 MQVKITNYGAIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAPFFGCIVGRVANRIKDGK 77
Q N GA I L V N VVLG+++ E Y+ + + G +GR ANRI GK
Sbjct: 384 FQATFANLGASIVDLKV-----NGQSVVLGYENEEGYLNPDSAYIGATIGRYANRISKGK 438
Query: 78 FSLDGVEYTLPINKPPNSLHGGFKGFDKVVWEVAEYKKGENPSITFKYRSRDGEEG--YP 135
FSL +Y L +N N+ H F + + + T +Y D E+ +P
Sbjct: 439 FSLCNKDYQLTVNNGVNANHSSIGSFHRKRFLGPIIQNPSKDVFTAEYMLIDNEKDTEFP 498
Query: 136 GDVSVMATYTLTSSTTMRLDMEAVPENK-----PTPISLAQHTYWNLAGHHSGNILDHSI 190
GD+ V YT+ + + +E V + K TPI+L H+Y+NL + I I
Sbjct: 499 GDLLVTIQYTVNVA---QKSLEMVYKGKLTAGEATPINLTNHSYFNLNKPYGDTIEGTEI 555
Query: 191 QIWGSHITPVDQNTVPTGEIMPVKGTPFDFTTEKKIGASINEVPGLGYDHNYVLDCGEEK 250
+ VD+N +PTG I+ + F+ T +G + +D +V+D +
Sbjct: 556 MVRSKKSVDVDKNMIPTGNIVDREIATFNSTKPTVLGPKNPQ-----FDCCFVVDENAKP 610
Query: 251 SG-------LKHAAKLKEPSTSRVLNLWTNAPGMQFYTGNYVNGVVGKGGAVYGKHSGVC 303
S L K P ++ L + + P QFYTG++++ A Y G
Sbjct: 611 SQINTLNNELTLIVKAFHPDSNITLEVLSTEPTYQFYTGDFLS-------AGYEARQGFA 663
Query: 304 LETQGFPNAINQPNFPSVV-VRPGESYQHTMLFEFS 338
+E + +AINQ N+ V ++ GE+Y +++ FS
Sbjct: 664 IEPGRYIDAINQENWKDCVTLKNGETYGSKIVYRFS 699
>sp|P09609|GAL10_KLULA Bifunctional protein GAL10 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=GAL10 PE=2 SV=2
Length = 688
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 144/331 (43%), Gaps = 27/331 (8%)
Query: 17 SMQVKITNYGAIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAPFFGCIVGRVANRIKDG 76
S +VK+ N GA I + V N VV D+ Y + PFFG VG ANRI +G
Sbjct: 372 SFEVKLANLGATIVDIVV-----NGCSVVASLDNETEYKDQSNPFFGATVGPYANRIANG 426
Query: 77 KFSLDGVEYTLPINKPP-NSLHGGFKGFDKVVWEVAEYKKGENPSITFKYRSRDGEEGYP 135
F ++G L ++K N +H G + + K E T ++ D E +P
Sbjct: 427 TFEINGKRIQLTVSKEDGNVVHSGINSYHSKKFLGPIVKNPEAHIWTADFKYVDEETEFP 486
Query: 136 GDVSVMATYTLTS-STTMRLDMEA-VPENKPTPISLAQHTYWNLAGHHSGNILDHSIQIW 193
+S + Y + S T+ ++ E+ V T ++ HTY+NL + I +Q+
Sbjct: 487 ARLSTLVRYKVDSEKKTLTVEYESKVAGQGSTGANITNHTYFNLNKFNEATIKGSKVQLI 546
Query: 194 GSHITPVDQNTVPTG------EIMPVKGTPFDFTTEKKIGASINEVPGLGYDHNYVLDCG 247
+ V+ +PTG ++ +P + TEK+ V GL LD
Sbjct: 547 DNTGLEVNNKLLPTGNLKKYTQVATFNDSPTEI-TEKEPVLDFCFVSGLPAK----LD-- 599
Query: 248 EEKSGLKHAAKLKEPSTSRVLNLWTNAPGMQFYTGNYVNGVVGKGGAVYGKHSGVCLETQ 307
S L KL + + T P Q YTG+YV+ V K Y +G+C E
Sbjct: 600 TRSSPLTPVFKLSNEDAKLEVEVATTEPTFQVYTGDYVD-VKDK----YENRAGICCEPG 654
Query: 308 GFPNAINQPNFPSVVVRP-GESYQHTMLFEF 337
+ +A+N P + S VV P GE+Y H + + F
Sbjct: 655 RYIDAVNNPEWKSSVVLPAGETYGHKLSYTF 685
>sp|P38893|YH10_YEAST Uncharacterized isomerase YHR210C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YHR210C PE=3 SV=1
Length = 341
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 151/342 (44%), Gaps = 41/342 (11%)
Query: 18 MQVKITNYGAIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAPFFGCIVGRVANRIKDGK 77
+Q I+ GA + L V N +VLG+ + Y+ + G VGR ANRI G
Sbjct: 21 LQATISELGATLLDLKV-----NNESIVLGYPDIHGYISDGYNYIGATVGRYANRIYKGM 75
Query: 78 FSLDGVEYTLPINKPPNSLHGGFKGFDKVVWEVAEYKKGENPSITFKYRSRDGE---EGY 134
FS++ + L +N N+ H F ++ ++ + + ++ D +
Sbjct: 76 FSMEDGPHQLTVNNCGNTNHSSISSFHLKKYKASKVQNPLDDLYIVEFTLLDDRTLPNEF 135
Query: 135 PGDVSVMATYTL-TSSTTMRLDMEA-VPENKPTPISLAQHTYWNL-AGHHSGNILDHSIQ 191
PGD++V YTL + T+ L+ EA + + TPI++ HTY+NL +I ++
Sbjct: 136 PGDLAVNLKYTLNVADMTLDLEYEAKLVSGEATPINMTNHTYFNLNKTMDKKSISGTEVR 195
Query: 192 IWGSHITPVDQNT-VPTGEIMPVKGTPFDFTTEKKIGASINEVPGLGYDHNYVLDCGEEK 250
+ V + +PTG+I+ K FD + +I + G YD+ +++D E
Sbjct: 196 LCSDKSLEVSEGALIPTGKIVQRKIATFDSSK-----PTILQDDGPIYDYAFIVD---EN 247
Query: 251 SGLKH-----------AAKLKEPSTSRVLNLWTNAPGMQFYTG-NYVNGVVGKGGAVYGK 298
LK A K P++ L + T P + FYTG N +G +
Sbjct: 248 KNLKTTDSVSVNKLVPAFKAYHPASRLSLEVSTTEPTVLFYTGDNLCDG--------FTP 299
Query: 299 HSGVCLETQGFPNAINQPNF-PSVVVRPGESYQHTMLFEFSV 339
SG +E + +AIN+ + V++R GE Y + F+V
Sbjct: 300 RSGFAVEQGRYVDAINRDGWRDCVLLRRGEVYTSKTRYRFAV 341
>sp|P53757|YN9A_YEAST Uncharacterized isomerase YNR071C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YNR071C PE=1 SV=1
Length = 342
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 146/346 (42%), Gaps = 48/346 (13%)
Query: 18 MQVKITNYGAIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAPFFGCIVGRVANRIKDGK 77
Q I GA + L V N VV G+ +V+ Y+ G VGR ANRI G
Sbjct: 21 FQATIAPLGATLVDLKV-----NGQSVVQGYSNVQDYLTDGN-MMGATVGRYANRIAKGV 74
Query: 78 FSLDGVEYTLPINKPPNSLHGGFKGFDKVVWEVAEYKKG--ENPS-----ITFKY---RS 127
FSLD + L +N N+ H + + +YK ENPS + FK +
Sbjct: 75 FSLDDGPHKLTVNNCGNTNHSSISSLN-----LKQYKASPVENPSKGVYVVEFKLLDDHT 129
Query: 128 RDGEEGYPGDVSVMATYTLTSSTTMRLDME---AVPENKPTPISLAQHTYWNLAGHHS-G 183
+ +PGD+ V YTL + M LDME + TPI++ H+Y+NL S
Sbjct: 130 QPNPNEFPGDLEVTVKYTLNVA-EMTLDMEYQAQLVRGDATPINMTNHSYFNLNKVKSEK 188
Query: 184 NILDHSIQIWGSHITPVDQNT-VPTGEIMPVKGTPFDFTTEKKIGASINEVPGLGYDHNY 242
+I +++ + V + +PTG+I+ FD T K + P +D +
Sbjct: 189 SIRGTEVKVCSNKSLEVTEGALLPTGKIIERNIATFDST---KPTVLHEDTP--VFDCTF 243
Query: 243 VLDCGEEKSGLKHAA--------KLKEPSTSRVLNLWTNAPGMQFYTGNYVNGVVGKGGA 294
++D ++ + K P + + T P + YTG + + GK
Sbjct: 244 IIDANKDLKTTDSVSVNKLVPVFKAYHPESHIKFEVSTTEPTVHLYTG---DNLCGK--- 297
Query: 295 VYGKHSGVCLETQGFPNAINQPNFP-SVVVRPGESYQHTMLFEFSV 339
+ SG ++ + +AIN+ + V+++ GE Y ++F +
Sbjct: 298 -FVPRSGFAVQQGRYVDAINRDEWRGCVLLKRGEVYTSKTQYKFDI 342
>sp|Q00053|GALM_LACHE Aldose 1-epimerase (Fragment) OS=Lactobacillus helveticus GN=galM
PE=3 SV=1
Length = 129
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 9 EVFELNNGSMQVKITNYGAIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAPFFGCIVGR 68
E+ N+ M VK+ NYGA + + + D+ +++L +S Y + + G VGR
Sbjct: 18 EIVLENDHGMIVKVLNYGATLEKVLLNDE-----NMILSLNSPADYSQ-ERNYLGGTVGR 71
Query: 69 VANRIKDGKFSLDGVEYTLPINKPPNSLHGGFKGFDKVVWE 109
+A R++ G++ + LPIN N +HGG G D VW+
Sbjct: 72 IAGRVRKGQWRHGLETHQLPINDGENHIHGGI-GTDTEVWD 111
>sp|P32139|YIHR_ECOLI Uncharacterized protein YihR OS=Escherichia coli (strain K12)
GN=yihR PE=4 SV=1
Length = 308
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 18/164 (10%)
Query: 71 NRIKDGKFSLDGVEYTLPINKPPN--SLHGGFKGFDKVVWEVAEYKKGENPSITFKYRSR 128
NRI +G + G EY LPIN+ + ++HG D W+++E F S
Sbjct: 72 NRIANGCYRYQGQEYQLPINEHSSKAAIHGLLAWRD---WQISELTATSVTLTAFLPPSY 128
Query: 129 DGEEGYPGDVSVMATYTLTSSTTMRLDMEAVPENKPT---PISLAQHTYWNLAGHHSGNI 185
GYP ++ Y+L + T L +E +N T P + H Y + ++
Sbjct: 129 ----GYPFMLASQVVYSLNAHT--GLSVEIASQNIGTVAAPYGVGIHPYLTC---NLTSV 179
Query: 186 LDHSIQIWGSHITPVDQNTVPTGEIMPVKGTPFDFTTEKKIGAS 229
++ Q+ + + VD++ PT + V +FT KKI A+
Sbjct: 180 DEYLFQLPANQVYAVDEHANPT-TLHHVDELDLNFTQAKKIAAT 222
>sp|Q9FHB3|FBRL3_ARATH Putative rRNA 2'-O-methyltransferase fibrillarin 3 OS=Arabidopsis
thaliana GN=FIB3 PE=2 SV=1
Length = 292
Score = 35.8 bits (81), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 19/102 (18%)
Query: 220 FTTEKKIGASI--NEVPG-LGYDHNYVLDCGEEKSGLK------HAAKLKEPSTSRVLNL 270
F + K A + N VPG + Y+ + E++S ++ H +KL + T+ V N+
Sbjct: 70 FVAKSKADALVTKNLVPGEIIYNEKRIFVQNEDRSTVEYRVWNPHRSKLADAITTGVDNI 129
Query: 271 WTNAPGMQF--------YTGNYVNGVVGKGGAVYG-KHSGVC 303
W PG++ YT ++V+ +VG G VY +HS +C
Sbjct: 130 WIK-PGVKVLYLGASSGYTVSHVSDIVGPEGCVYAVEHSDIC 170
>sp|Q2RKX8|LEPA_MOOTA Elongation factor 4 OS=Moorella thermoacetica (strain ATCC 39073)
GN=lepA PE=3 SV=1
Length = 602
Score = 35.4 bits (80), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 27 AIITSLSVPDKHGNWADVVLGFDSVEPYVKGAAPFFGCIVGRV--ANRIK----DGKFSL 80
AII + P G L FDS+ +GA P+F + GRV +RI+ +F +
Sbjct: 179 AIIRRVPPPRGDGEAPLQALIFDSIFDSYRGAIPYFRVVQGRVRKGDRIRFMATGAEFEV 238
Query: 81 DGVEYTLPINKPPNSLHGGFKGF 103
+ V P +P SL G GF
Sbjct: 239 NEVGVFTPAPRPVESLAAGEVGF 261
>sp|Q9DE13|BAZ2B_CHICK Bromodomain adjacent to zinc finger domain protein 2B OS=Gallus
gallus GN=BAZ2B PE=2 SV=1
Length = 2130
Score = 33.9 bits (76), Expect = 1.6, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 62/161 (38%), Gaps = 19/161 (11%)
Query: 114 KKGENPSITFKYRSRDGEEGYPGDVSVMATYTLTSSTTMRLDMEAVPENKPTPISLAQHT 173
K SI R E Y SS ++ + ++ +KPT S A
Sbjct: 360 KNTSEESIPLISDVRSKREQYKQTFPAAQLKKQESSKNLKKVIASLSSSKPTSCSPAHQK 419
Query: 174 YWNLAGHHSGNILDHSIQIWGSHITPVDQNTVPTGEIMPV-KGTPFDFTTEKKIGASINE 232
+L +HS L ++ + G+H P G I V + P TT++K INE
Sbjct: 420 LTSLENNHSNPFLTNA--LLGNH--------QPNGVIQSVIQEVPLALTTKQKSQTKINE 469
Query: 233 VPGLGYDHNYVLD-----CGEEKSGLKHAAKLKEPSTSRVL 268
+ + L CG++ +G + L PSTS VL
Sbjct: 470 SVAIASSTPFSLPVNLSACGKKTTGNR---TLVVPSTSPVL 507
>sp|Q09683|RAD32_SCHPO DNA repair protein rad32 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rad32 PE=1 SV=1
Length = 649
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 118 NPSITFKYRSRDGEEGYPGDVSVMATYTLTSSTTMRLDMEAVPEN-KPTPISLAQHTYWN 176
N I + R EE ++S + STT R D E +PE T I++A+HT
Sbjct: 485 NKQINLLVKKRVTEENLEQEISSIINDLPKISTTKRKDYEELPEEVSETSINIAEHTP-- 542
Query: 177 LAGHHSGNILDH 188
H+ ++LDH
Sbjct: 543 -VLKHTSSLLDH 553
>sp|P39840|GALM_BACSU Aldose 1-epimerase OS=Bacillus subtilis (strain 168) GN=galM PE=1
SV=2
Length = 325
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 59/149 (39%), Gaps = 15/149 (10%)
Query: 71 NRIKDGKFSLDGVEYTLPINKPP--NSLHGGFKGFDKVVWEVAEYKKGENPSITFKYRSR 128
NRI DG FS G Y IN+ N LH GF +K W V K+ + I
Sbjct: 73 NRISDGTFSFRGRTYHFDINEKDKHNHLH-GFLYHEK--WNVVTTKQTDEGVIVETEIDL 129
Query: 129 DG----EEGYPGDVSVMATYTLTSSTTMRLDMEAVPENKPTPISLAQHTYWNLAGHHSGN 184
++ +P V TYT+ +T + + P + HT + S
Sbjct: 130 SELPHVQKQFPHHAVVRMTYTIKENTLFKHATVMNKGKEAFPWGIGYHTTFIFPAESSLF 189
Query: 185 ILDHSIQIWGSHITPVDQNTVPTGEIMPV 213
L + Q W +D+ +PTG++M V
Sbjct: 190 SLT-ADQQW-----ELDERLLPTGKLMDV 212
>sp|O34431|ATCL_BACSU Calcium-transporting ATPase OS=Bacillus subtilis (strain 168)
GN=yloB PE=1 SV=1
Length = 890
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 205 VPTGEIMPVKGTPFDFTTEKKIGASINEVPGLGYDHNYVLDCGEEKSGLKHAAKLKEPST 264
+P+ E++P G FT+ +IGA + V + GE +KHA KLK+P
Sbjct: 127 IPSKELVP--GDIVKFTSGDRIGADVRIVEARSLEIEESALTGESIPVVKHADKLKKPDV 184
Query: 265 S 265
S
Sbjct: 185 S 185
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.135 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 146,449,920
Number of Sequences: 539616
Number of extensions: 6814662
Number of successful extensions: 11312
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 11221
Number of HSP's gapped (non-prelim): 28
length of query: 340
length of database: 191,569,459
effective HSP length: 118
effective length of query: 222
effective length of database: 127,894,771
effective search space: 28392639162
effective search space used: 28392639162
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)