Query 019519
Match_columns 340
No_of_seqs 170 out of 1276
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 02:24:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019519.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019519hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01772 MDH_euk_gproteo mala 100.0 9.9E-68 2.1E-72 497.3 31.8 309 30-339 1-311 (312)
2 COG0039 Mdh Malate/lactate deh 100.0 1.1E-67 2.5E-72 490.9 31.0 297 29-339 1-312 (313)
3 cd01337 MDH_glyoxysomal_mitoch 100.0 2.4E-67 5.2E-72 493.9 31.9 308 29-338 1-310 (310)
4 PTZ00325 malate dehydrogenase; 100.0 3.4E-64 7.4E-69 474.7 34.6 310 27-340 7-319 (321)
5 PLN00106 malate dehydrogenase 100.0 4.8E-64 1E-68 474.0 33.2 300 29-332 19-322 (323)
6 cd05290 LDH_3 A subgroup of L- 100.0 2.6E-64 5.6E-69 474.2 30.9 286 30-331 1-306 (307)
7 KOG1495 Lactate dehydrogenase 100.0 2.9E-63 6.3E-68 441.3 28.5 290 28-335 20-330 (332)
8 cd05293 LDH_1 A subgroup of L- 100.0 8.2E-63 1.8E-67 465.3 31.6 288 28-332 3-311 (312)
9 TIGR01759 MalateDH-SF1 malate 100.0 5.7E-63 1.2E-67 467.5 30.0 296 26-334 1-323 (323)
10 PRK05086 malate dehydrogenase; 100.0 7.8E-62 1.7E-66 459.2 33.7 309 29-340 1-312 (312)
11 PLN02602 lactate dehydrogenase 100.0 4.7E-62 1E-66 465.2 32.1 291 29-334 38-348 (350)
12 PRK05442 malate dehydrogenase; 100.0 1.6E-61 3.4E-66 458.2 30.6 298 27-337 3-325 (326)
13 PRK00066 ldh L-lactate dehydro 100.0 4.4E-61 9.4E-66 454.6 33.0 292 27-334 5-313 (315)
14 TIGR01771 L-LDH-NAD L-lactate 100.0 1.5E-61 3.2E-66 454.5 27.3 281 33-329 1-299 (299)
15 PLN00112 malate dehydrogenase 100.0 1.1E-60 2.4E-65 464.8 31.2 301 26-339 98-425 (444)
16 TIGR01757 Malate-DH_plant mala 100.0 2.3E-60 4.9E-65 456.4 31.3 300 26-338 42-368 (387)
17 KOG1494 NAD-dependent malate d 100.0 2.7E-60 5.9E-65 424.2 29.1 324 16-339 16-340 (345)
18 cd00704 MDH Malate dehydrogena 100.0 2.3E-60 5E-65 450.4 29.4 295 29-335 1-323 (323)
19 cd01338 MDH_choloroplast_like 100.0 7E-60 1.5E-64 446.9 30.9 297 27-335 1-321 (322)
20 cd05291 HicDH_like L-2-hydroxy 100.0 3E-59 6.4E-64 441.6 31.6 288 29-332 1-305 (306)
21 cd00300 LDH_like L-lactate deh 100.0 2.3E-59 4.9E-64 440.9 29.8 286 31-331 1-299 (300)
22 PTZ00117 malate dehydrogenase; 100.0 7.8E-59 1.7E-63 440.4 33.5 297 27-337 4-317 (319)
23 PTZ00082 L-lactate dehydrogena 100.0 1.4E-58 3.1E-63 438.3 32.9 290 27-332 5-318 (321)
24 TIGR01763 MalateDH_bact malate 100.0 1.6E-58 3.5E-63 435.5 30.9 288 29-332 2-303 (305)
25 TIGR01758 MDH_euk_cyt malate d 100.0 1.1E-57 2.4E-62 432.2 30.1 294 30-335 1-323 (324)
26 cd05292 LDH_2 A subgroup of L- 100.0 2.2E-57 4.9E-62 428.8 31.8 288 29-332 1-306 (308)
27 cd01336 MDH_cytoplasmic_cytoso 100.0 9.4E-58 2E-62 433.4 28.4 297 27-335 1-325 (325)
28 PRK06223 malate dehydrogenase; 100.0 1.9E-55 4.2E-60 416.0 32.1 290 28-333 2-305 (307)
29 cd05295 MDH_like Malate dehydr 100.0 1.4E-55 3.1E-60 428.8 30.0 294 27-335 122-451 (452)
30 cd05294 LDH-like_MDH_nadp A la 100.0 2.2E-55 4.8E-60 415.1 30.0 288 29-332 1-307 (309)
31 cd01339 LDH-like_MDH L-lactate 100.0 3.4E-55 7.4E-60 413.0 30.4 285 31-331 1-299 (300)
32 PLN00135 malate dehydrogenase 100.0 3.7E-55 8E-60 411.2 28.9 271 56-338 15-308 (309)
33 TIGR01756 LDH_protist lactate 100.0 7.4E-54 1.6E-58 403.4 27.8 271 56-338 17-312 (313)
34 cd00650 LDH_MDH_like NAD-depen 100.0 7.6E-51 1.6E-55 376.7 29.1 254 31-331 1-262 (263)
35 KOG1496 Malate dehydrogenase [ 100.0 2.9E-46 6.3E-51 327.6 21.2 304 27-339 3-331 (332)
36 cd05197 GH4_glycoside_hydrolas 100.0 6.4E-32 1.4E-36 264.4 25.5 280 29-334 1-391 (425)
37 PF00056 Ldh_1_N: lactate/mala 100.0 3.5E-33 7.6E-38 234.8 13.2 137 29-172 1-141 (141)
38 PF02866 Ldh_1_C: lactate/mala 100.0 8.9E-33 1.9E-37 240.6 14.9 159 174-338 1-174 (174)
39 PRK15076 alpha-galactosidase; 100.0 1.3E-31 2.9E-36 262.9 24.5 286 28-334 1-385 (431)
40 cd05296 GH4_P_beta_glucosidase 100.0 4.4E-31 9.5E-36 258.1 25.6 288 29-334 1-380 (419)
41 cd05298 GH4_GlvA_pagL_like Gly 100.0 3E-29 6.5E-34 246.0 27.6 288 29-334 1-394 (437)
42 COG1486 CelF Alpha-galactosida 100.0 4.2E-28 9E-33 233.4 23.5 292 26-334 1-397 (442)
43 cd05297 GH4_alpha_glucosidase_ 100.0 3.8E-27 8.3E-32 231.6 27.3 286 29-334 1-388 (423)
44 PF02056 Glyco_hydro_4: Family 99.9 3.2E-21 7E-26 167.4 14.6 151 30-191 1-183 (183)
45 PF02737 3HCDH_N: 3-hydroxyacy 98.9 1E-08 2.2E-13 89.7 8.9 117 30-175 1-137 (180)
46 COG1250 FadB 3-hydroxyacyl-CoA 98.8 2.9E-08 6.3E-13 93.2 11.0 119 27-174 2-140 (307)
47 COG1004 Ugd Predicted UDP-gluc 98.8 9E-08 2E-12 91.6 12.1 115 29-155 1-131 (414)
48 PRK07066 3-hydroxybutyryl-CoA 98.7 1.2E-07 2.6E-12 90.2 10.7 119 29-174 8-141 (321)
49 PRK08293 3-hydroxybutyryl-CoA 98.6 3.1E-07 6.6E-12 86.2 11.5 120 27-174 2-142 (287)
50 PRK07819 3-hydroxybutyryl-CoA 98.6 6.2E-07 1.3E-11 84.2 13.3 122 28-177 5-146 (286)
51 TIGR02437 FadB fatty oxidation 98.6 3.5E-07 7.6E-12 95.9 12.2 119 27-174 312-450 (714)
52 PRK11730 fadB multifunctional 98.6 5.7E-07 1.2E-11 94.5 13.6 119 27-174 312-450 (715)
53 TIGR02441 fa_ox_alpha_mit fatt 98.6 3.4E-07 7.3E-12 96.3 11.5 119 27-174 334-472 (737)
54 PRK11154 fadJ multifunctional 98.6 4.7E-07 1E-11 95.0 12.4 118 28-174 309-447 (708)
55 TIGR02440 FadJ fatty oxidation 98.6 7E-07 1.5E-11 93.5 13.0 119 27-174 303-442 (699)
56 KOG2304 3-hydroxyacyl-CoA dehy 98.5 3.6E-08 7.9E-13 87.2 2.7 122 27-175 10-155 (298)
57 PLN02166 dTDP-glucose 4,6-dehy 98.5 1.6E-06 3.5E-11 86.1 14.0 119 21-145 113-233 (436)
58 PRK05808 3-hydroxybutyryl-CoA 98.5 2E-06 4.2E-11 80.5 13.1 119 28-174 3-140 (282)
59 PF03721 UDPG_MGDP_dh_N: UDP-g 98.5 9.1E-07 2E-11 77.7 9.1 121 29-163 1-139 (185)
60 PF01073 3Beta_HSD: 3-beta hyd 98.4 1.3E-06 2.9E-11 81.7 10.3 117 32-150 1-119 (280)
61 PRK06035 3-hydroxyacyl-CoA deh 98.4 2.7E-06 5.9E-11 79.9 12.2 119 28-175 3-144 (291)
62 PLN02206 UDP-glucuronate decar 98.4 5.2E-06 1.1E-10 82.6 13.4 121 18-146 109-233 (442)
63 PF02719 Polysacc_synt_2: Poly 98.3 4.8E-07 1E-11 84.4 4.6 114 31-145 1-128 (293)
64 PRK07530 3-hydroxybutyryl-CoA 98.3 1E-05 2.3E-10 76.0 13.2 122 27-177 3-144 (292)
65 PF01210 NAD_Gly3P_dh_N: NAD-d 98.3 1.6E-06 3.5E-11 74.1 6.9 93 30-144 1-102 (157)
66 TIGR02279 PaaC-3OHAcCoADH 3-hy 98.3 6.8E-06 1.5E-10 82.9 12.1 122 28-177 5-145 (503)
67 PLN02427 UDP-apiose/xylose syn 98.3 7E-06 1.5E-10 80.0 11.9 114 27-146 13-136 (386)
68 PRK08268 3-hydroxy-acyl-CoA de 98.3 8.3E-06 1.8E-10 82.5 11.9 120 29-177 8-147 (507)
69 PLN00198 anthocyanidin reducta 98.2 2.1E-05 4.6E-10 75.1 14.0 174 28-204 9-202 (338)
70 COG1086 Predicted nucleoside-d 98.2 2.3E-05 5E-10 78.4 14.4 118 27-145 249-376 (588)
71 PLN02353 probable UDP-glucose 98.2 2.2E-05 4.8E-10 78.6 14.0 123 28-155 1-138 (473)
72 PRK09260 3-hydroxybutyryl-CoA 98.2 9.7E-06 2.1E-10 76.1 10.4 119 29-174 2-139 (288)
73 PRK15181 Vi polysaccharide bio 98.2 2E-05 4.4E-10 75.7 12.6 169 26-204 13-199 (348)
74 TIGR01915 npdG NADPH-dependent 98.2 9.7E-06 2.1E-10 73.1 9.6 100 29-150 1-106 (219)
75 KOG1502 Flavonol reductase/cin 98.2 1.9E-05 4E-10 74.7 11.6 120 27-151 5-133 (327)
76 PRK06129 3-hydroxyacyl-CoA deh 98.2 2.5E-05 5.4E-10 74.1 12.7 121 28-174 2-140 (308)
77 PRK06130 3-hydroxybutyryl-CoA 98.2 1.7E-05 3.8E-10 75.1 11.6 120 28-174 4-137 (311)
78 COG2085 Predicted dinucleotide 98.2 3E-05 6.5E-10 68.7 12.0 93 28-148 1-96 (211)
79 PRK07531 bifunctional 3-hydrox 98.1 2.2E-05 4.7E-10 79.3 12.0 103 29-152 5-121 (495)
80 PLN02650 dihydroflavonol-4-red 98.1 4.9E-05 1.1E-09 73.0 13.7 115 29-145 6-127 (351)
81 PLN02545 3-hydroxybutyryl-CoA 98.1 2.3E-05 5.1E-10 73.7 11.2 119 28-175 4-142 (295)
82 PLN02662 cinnamyl-alcohol dehy 98.1 4.6E-05 1E-09 71.9 13.3 114 28-144 4-125 (322)
83 PRK11908 NAD-dependent epimera 98.1 2.7E-05 5.7E-10 74.7 10.6 110 28-146 1-118 (347)
84 TIGR03589 PseB UDP-N-acetylglu 98.0 4.5E-05 9.7E-10 72.7 11.5 113 28-145 4-124 (324)
85 CHL00194 ycf39 Ycf39; Provisio 98.0 3.1E-05 6.8E-10 73.4 10.0 108 29-145 1-109 (317)
86 PRK08125 bifunctional UDP-gluc 98.0 6.6E-05 1.4E-09 78.5 13.3 168 25-204 312-497 (660)
87 PLN03209 translocon at the inn 98.0 7.9E-05 1.7E-09 75.7 12.0 137 6-145 48-207 (576)
88 PLN02214 cinnamoyl-CoA reducta 97.9 0.00014 2.9E-09 69.9 13.0 110 28-145 10-126 (342)
89 PLN02572 UDP-sulfoquinovose sy 97.9 7.6E-05 1.6E-09 74.4 11.3 175 27-204 46-262 (442)
90 PRK10217 dTDP-glucose 4,6-dehy 97.9 0.00015 3.2E-09 69.6 12.9 168 28-204 1-194 (355)
91 COG0240 GpsA Glycerol-3-phosph 97.9 7.6E-05 1.6E-09 70.6 10.2 104 28-155 1-120 (329)
92 COG1087 GalE UDP-glucose 4-epi 97.9 0.00026 5.7E-09 65.8 13.5 155 29-196 1-167 (329)
93 TIGR03466 HpnA hopanoid-associ 97.9 9.9E-05 2.1E-09 69.6 10.8 112 29-146 1-113 (328)
94 TIGR02622 CDP_4_6_dhtase CDP-g 97.9 0.00017 3.7E-09 69.2 12.3 117 28-146 4-127 (349)
95 PLN02989 cinnamyl-alcohol dehy 97.9 0.00035 7.6E-09 66.2 14.1 116 28-145 5-128 (325)
96 TIGR01181 dTDP_gluc_dehyt dTDP 97.9 0.00012 2.6E-09 68.4 10.8 166 30-203 1-183 (317)
97 PRK00094 gpsA NAD(P)H-dependen 97.9 0.00011 2.3E-09 69.8 10.4 101 28-150 1-110 (325)
98 PLN02778 3,5-epimerase/4-reduc 97.8 0.00029 6.2E-09 66.4 13.1 89 28-138 9-104 (298)
99 PRK10084 dTDP-glucose 4,6 dehy 97.8 0.00022 4.8E-09 68.3 12.1 170 29-204 1-201 (352)
100 COG0451 WcaG Nucleoside-diphos 97.8 0.00012 2.5E-09 68.5 10.0 166 29-206 1-178 (314)
101 PLN02695 GDP-D-mannose-3',5'-e 97.8 5.5E-05 1.2E-09 73.5 8.0 166 28-205 21-202 (370)
102 TIGR03026 NDP-sugDHase nucleot 97.8 0.00017 3.6E-09 71.2 11.4 113 29-155 1-131 (411)
103 PRK10675 UDP-galactose-4-epime 97.8 0.00025 5.4E-09 67.5 11.6 114 29-145 1-123 (338)
104 PLN02896 cinnamyl-alcohol dehy 97.8 0.00023 5E-09 68.4 11.5 113 28-145 10-137 (353)
105 PF03807 F420_oxidored: NADP o 97.8 6.3E-05 1.4E-09 58.3 5.9 94 30-147 1-96 (96)
106 PLN02986 cinnamyl-alcohol dehy 97.7 0.00068 1.5E-08 64.2 13.9 105 29-135 6-117 (322)
107 PF03446 NAD_binding_2: NAD bi 97.7 0.00017 3.6E-09 61.9 8.7 88 28-142 1-91 (163)
108 TIGR01777 yfcH conserved hypot 97.7 0.00019 4.2E-09 66.4 9.4 99 31-138 1-103 (292)
109 PLN02260 probable rhamnose bio 97.7 0.00058 1.3E-08 71.5 13.8 119 27-145 5-131 (668)
110 PRK12439 NAD(P)H-dependent gly 97.7 0.0003 6.5E-09 67.7 10.7 100 26-150 5-116 (341)
111 PRK06522 2-dehydropantoate 2-r 97.7 0.00061 1.3E-08 64.0 12.6 106 29-154 1-109 (304)
112 PRK11064 wecC UDP-N-acetyl-D-m 97.7 0.00044 9.6E-09 68.3 12.0 114 26-155 1-130 (415)
113 TIGR01472 gmd GDP-mannose 4,6- 97.7 0.00029 6.3E-09 67.4 10.5 155 29-192 1-177 (343)
114 PRK08229 2-dehydropantoate 2-r 97.7 0.00035 7.6E-09 66.9 11.0 100 28-153 2-115 (341)
115 PLN02583 cinnamoyl-CoA reducta 97.7 0.0011 2.4E-08 62.2 14.1 113 29-145 7-127 (297)
116 PRK12921 2-dehydropantoate 2-r 97.7 0.00046 1E-08 64.9 11.5 118 29-175 1-126 (305)
117 PRK15057 UDP-glucose 6-dehydro 97.7 0.00047 1E-08 67.5 11.6 113 29-155 1-128 (388)
118 PRK06194 hypothetical protein; 97.6 0.0013 2.9E-08 61.0 14.1 160 27-202 5-192 (287)
119 PRK09987 dTDP-4-dehydrorhamnos 97.6 0.0002 4.4E-09 67.4 8.5 99 29-145 1-103 (299)
120 PRK14620 NAD(P)H-dependent gly 97.6 0.00035 7.5E-09 66.7 10.1 100 29-150 1-111 (326)
121 PF13460 NAD_binding_10: NADH( 97.6 0.00059 1.3E-08 58.9 10.6 93 31-145 1-97 (183)
122 PRK14619 NAD(P)H-dependent gly 97.6 0.00037 8.1E-09 66.0 9.6 79 28-147 4-84 (308)
123 PRK14618 NAD(P)H-dependent gly 97.6 0.00043 9.3E-09 66.1 10.0 97 28-149 4-108 (328)
124 PTZ00345 glycerol-3-phosphate 97.6 0.00063 1.4E-08 66.0 11.2 98 27-144 10-128 (365)
125 PLN02240 UDP-glucose 4-epimera 97.6 0.0011 2.4E-08 63.3 12.8 116 27-145 4-131 (352)
126 PRK07201 short chain dehydroge 97.6 0.0011 2.4E-08 69.0 13.4 109 29-140 1-120 (657)
127 PF11975 Glyco_hydro_4C: Famil 97.5 0.00057 1.2E-08 62.2 9.9 78 248-334 133-214 (232)
128 TIGR03376 glycerol3P_DH glycer 97.5 0.00058 1.3E-08 65.7 10.2 95 30-144 1-115 (342)
129 PLN02653 GDP-mannose 4,6-dehyd 97.5 0.0005 1.1E-08 65.7 9.3 108 28-137 6-126 (340)
130 PRK11150 rfaD ADP-L-glycero-D- 97.5 0.0007 1.5E-08 63.6 10.1 108 31-145 2-115 (308)
131 KOG1430 C-3 sterol dehydrogena 97.5 0.00066 1.4E-08 65.4 9.7 110 27-138 3-119 (361)
132 KOG1429 dTDP-glucose 4-6-dehyd 97.5 0.00019 4.2E-09 66.1 5.5 112 27-144 26-139 (350)
133 COG1748 LYS9 Saccharopine dehy 97.4 0.0014 3E-08 63.8 11.4 76 28-106 1-78 (389)
134 PRK12320 hypothetical protein; 97.4 0.0006 1.3E-08 71.2 9.3 101 29-145 1-101 (699)
135 PLN02686 cinnamoyl-CoA reducta 97.4 0.00078 1.7E-08 65.4 9.6 108 26-135 51-169 (367)
136 PLN02657 3,8-divinyl protochlo 97.4 0.0019 4.1E-08 63.3 12.1 114 26-145 58-181 (390)
137 TIGR01214 rmlD dTDP-4-dehydror 97.4 0.00074 1.6E-08 62.6 8.6 95 30-145 1-99 (287)
138 PRK06249 2-dehydropantoate 2-r 97.4 0.00081 1.8E-08 63.8 8.8 117 27-173 4-127 (313)
139 PRK08269 3-hydroxybutyryl-CoA 97.3 0.0012 2.6E-08 62.8 9.8 112 40-175 1-138 (314)
140 TIGR02197 heptose_epim ADP-L-g 97.3 0.0012 2.7E-08 61.8 9.6 109 31-145 1-113 (314)
141 PLN02253 xanthoxin dehydrogena 97.3 0.0055 1.2E-07 56.6 13.8 148 26-190 16-187 (280)
142 PRK13394 3-hydroxybutyrate deh 97.3 0.0017 3.8E-08 59.0 9.9 116 27-146 6-144 (262)
143 PF01370 Epimerase: NAD depend 97.3 0.00035 7.7E-09 62.4 5.1 166 31-204 1-174 (236)
144 PRK05875 short chain dehydroge 97.3 0.0076 1.6E-07 55.5 14.2 119 26-146 5-146 (276)
145 PRK15182 Vi polysaccharide bio 97.3 0.0034 7.3E-08 62.3 12.5 111 27-153 5-129 (425)
146 PRK07634 pyrroline-5-carboxyla 97.3 0.0026 5.6E-08 57.9 10.9 70 27-104 3-74 (245)
147 COG1088 RfbB dTDP-D-glucose 4, 97.3 0.0023 5E-08 59.6 10.3 161 29-193 1-174 (340)
148 PRK05865 hypothetical protein; 97.3 0.0016 3.4E-08 69.6 10.5 104 29-148 1-105 (854)
149 PRK08267 short chain dehydroge 97.2 0.0028 6E-08 57.9 10.7 116 29-147 2-137 (260)
150 PRK07680 late competence prote 97.2 0.003 6.5E-08 58.7 10.3 97 29-149 1-100 (273)
151 PRK11880 pyrroline-5-carboxyla 97.2 0.0023 5E-08 59.1 9.4 96 28-149 2-98 (267)
152 TIGR00872 gnd_rel 6-phosphoglu 97.2 0.0037 8E-08 59.0 10.7 95 29-148 1-96 (298)
153 PRK05717 oxidoreductase; Valid 97.2 0.0033 7.1E-08 57.3 10.1 154 28-201 10-184 (255)
154 PRK14982 acyl-ACP reductase; P 97.1 0.0026 5.6E-08 61.0 9.6 97 28-152 155-253 (340)
155 TIGR02354 thiF_fam2 thiamine b 97.1 0.0046 9.9E-08 55.0 10.6 35 27-63 20-54 (200)
156 PRK07523 gluconate 5-dehydroge 97.1 0.01 2.2E-07 53.9 13.3 116 28-147 10-147 (255)
157 TIGR01179 galE UDP-glucose-4-e 97.1 0.0031 6.8E-08 59.1 9.9 106 30-140 1-116 (328)
158 PRK07679 pyrroline-5-carboxyla 97.1 0.0047 1E-07 57.6 10.9 71 26-104 1-73 (279)
159 PRK07326 short chain dehydroge 97.1 0.0064 1.4E-07 54.5 11.4 115 28-147 6-141 (237)
160 PRK07069 short chain dehydroge 97.1 0.026 5.7E-07 50.9 15.4 115 30-147 1-139 (251)
161 PRK12829 short chain dehydroge 97.1 0.0064 1.4E-07 55.3 11.4 36 27-64 10-45 (264)
162 PRK07102 short chain dehydroge 97.1 0.0088 1.9E-07 54.0 12.1 117 28-147 1-136 (243)
163 PRK12429 3-hydroxybutyrate deh 97.1 0.0062 1.4E-07 55.2 11.1 114 28-146 4-140 (258)
164 PLN02688 pyrroline-5-carboxyla 97.1 0.0033 7.2E-08 58.0 9.4 66 29-104 1-69 (266)
165 PRK07417 arogenate dehydrogena 97.1 0.0027 5.9E-08 59.3 8.9 64 29-104 1-65 (279)
166 PRK07806 short chain dehydroge 97.1 0.0034 7.4E-08 56.8 9.3 115 28-146 6-135 (248)
167 PRK07502 cyclohexadienyl dehyd 97.1 0.0059 1.3E-07 57.8 11.1 68 28-104 6-74 (307)
168 PF01118 Semialdhyde_dh: Semia 97.0 0.0011 2.4E-08 53.9 5.2 72 30-104 1-74 (121)
169 PRK07231 fabG 3-ketoacyl-(acyl 97.0 0.015 3.2E-07 52.4 13.2 114 27-146 4-141 (251)
170 PRK06182 short chain dehydroge 97.0 0.0065 1.4E-07 56.0 11.0 114 27-146 2-133 (273)
171 PRK12384 sorbitol-6-phosphate 97.0 0.016 3.5E-07 52.7 13.3 118 29-148 3-143 (259)
172 PRK09135 pteridine reductase; 97.0 0.014 3.1E-07 52.4 12.8 104 29-135 7-130 (249)
173 PRK06180 short chain dehydroge 97.0 0.015 3.2E-07 53.8 13.1 114 28-146 4-137 (277)
174 PRK12828 short chain dehydroge 97.0 0.0061 1.3E-07 54.4 10.2 116 28-146 7-141 (239)
175 PF10727 Rossmann-like: Rossma 97.0 0.0024 5.1E-08 52.6 6.7 102 27-154 9-115 (127)
176 PRK12549 shikimate 5-dehydroge 97.0 0.0036 7.7E-08 58.8 8.8 74 29-107 128-205 (284)
177 PRK06482 short chain dehydroge 97.0 0.014 3.1E-07 53.7 12.8 113 29-146 3-135 (276)
178 PRK06545 prephenate dehydrogen 97.0 0.0043 9.3E-08 60.2 9.6 68 29-104 1-68 (359)
179 PRK08655 prephenate dehydrogen 97.0 0.0045 9.9E-08 61.6 9.9 64 29-104 1-66 (437)
180 PRK07067 sorbitol dehydrogenas 97.0 0.011 2.4E-07 53.7 11.9 115 29-147 7-141 (257)
181 PRK08643 acetoin reductase; Va 97.0 0.061 1.3E-06 48.8 16.7 116 29-148 3-141 (256)
182 PLN00141 Tic62-NAD(P)-related 96.9 0.0039 8.4E-08 56.9 8.6 112 26-144 15-130 (251)
183 PRK08278 short chain dehydroge 96.9 0.031 6.7E-07 51.6 14.7 159 28-202 6-193 (273)
184 TIGR03206 benzo_BadH 2-hydroxy 96.9 0.01 2.2E-07 53.5 11.3 116 27-146 2-139 (250)
185 PLN02996 fatty acyl-CoA reduct 96.9 0.014 3.1E-07 59.0 13.3 107 28-135 11-150 (491)
186 PRK08340 glucose-1-dehydrogena 96.9 0.019 4.1E-07 52.5 13.1 114 29-147 1-139 (259)
187 PTZ00142 6-phosphogluconate de 96.9 0.0069 1.5E-07 60.8 10.8 98 28-148 1-104 (470)
188 PRK12939 short chain dehydroge 96.9 0.022 4.8E-07 51.2 13.3 117 26-146 5-143 (250)
189 TIGR01746 Thioester-redct thio 96.9 0.0088 1.9E-07 56.9 11.2 114 30-145 1-135 (367)
190 COG0300 DltE Short-chain dehyd 96.9 0.018 3.9E-07 53.3 12.6 119 27-148 5-145 (265)
191 TIGR01832 kduD 2-deoxy-D-gluco 96.9 0.021 4.6E-07 51.5 13.1 116 27-146 4-140 (248)
192 PRK06914 short chain dehydroge 96.9 0.014 3E-07 53.9 11.9 116 28-146 3-140 (280)
193 PRK10538 malonic semialdehyde 96.9 0.0091 2E-07 54.2 10.5 111 29-147 1-135 (248)
194 PRK05653 fabG 3-ketoacyl-(acyl 96.9 0.0061 1.3E-07 54.6 9.2 115 27-145 4-140 (246)
195 PRK06172 short chain dehydroge 96.9 0.023 4.9E-07 51.5 13.1 115 28-147 7-145 (253)
196 PRK06924 short chain dehydroge 96.9 0.0083 1.8E-07 54.3 10.2 34 29-64 2-35 (251)
197 PRK12367 short chain dehydroge 96.9 0.013 2.8E-07 53.6 11.4 103 26-132 12-118 (245)
198 PRK08213 gluconate 5-dehydroge 96.9 0.018 3.8E-07 52.5 12.3 116 28-147 12-150 (259)
199 PRK08219 short chain dehydroge 96.9 0.01 2.3E-07 52.6 10.5 75 28-107 3-82 (227)
200 COG1090 Predicted nucleoside-d 96.9 0.0084 1.8E-07 55.4 9.8 98 31-139 1-103 (297)
201 PRK12826 3-ketoacyl-(acyl-carr 96.9 0.011 2.4E-07 53.2 10.7 114 28-146 6-142 (251)
202 PLN02256 arogenate dehydrogena 96.9 0.008 1.7E-07 57.0 10.0 66 26-104 34-100 (304)
203 PLN02260 probable rhamnose bio 96.8 0.01 2.3E-07 62.1 11.9 89 27-137 379-474 (668)
204 PRK11559 garR tartronate semia 96.8 0.0052 1.1E-07 57.7 8.7 65 28-104 2-66 (296)
205 PRK12823 benD 1,6-dihydroxycyc 96.8 0.02 4.4E-07 52.1 12.2 116 26-146 6-144 (260)
206 PRK01438 murD UDP-N-acetylmura 96.8 0.014 3E-07 58.7 12.0 140 13-163 2-148 (480)
207 PLN00016 RNA-binding protein; 96.8 0.0071 1.5E-07 58.8 9.7 35 28-64 52-90 (378)
208 PRK07666 fabG 3-ketoacyl-(acyl 96.8 0.023 4.9E-07 51.1 12.4 118 27-148 6-145 (239)
209 PRK07063 short chain dehydroge 96.8 0.086 1.9E-06 48.0 16.4 118 27-147 6-146 (260)
210 PRK06928 pyrroline-5-carboxyla 96.8 0.011 2.3E-07 55.3 10.5 99 28-149 1-102 (277)
211 PRK06701 short chain dehydroge 96.8 0.012 2.6E-07 55.1 10.9 118 26-147 44-183 (290)
212 PRK11199 tyrA bifunctional cho 96.8 0.0052 1.1E-07 59.9 8.6 53 28-104 98-150 (374)
213 PRK07814 short chain dehydroge 96.8 0.019 4.1E-07 52.6 11.9 117 27-147 9-148 (263)
214 PRK05876 short chain dehydroge 96.8 0.016 3.4E-07 53.8 11.3 115 28-146 6-143 (275)
215 TIGR02632 RhaD_aldol-ADH rhamn 96.8 0.024 5.2E-07 59.6 13.8 118 27-146 413-553 (676)
216 TIGR01505 tartro_sem_red 2-hyd 96.8 0.0057 1.2E-07 57.3 8.3 63 30-104 1-63 (291)
217 PRK07832 short chain dehydroge 96.8 0.11 2.3E-06 47.8 16.7 116 29-148 1-140 (272)
218 PRK07424 bifunctional sterol d 96.7 0.022 4.8E-07 56.1 12.5 102 27-131 177-283 (406)
219 COG0569 TrkA K+ transport syst 96.7 0.0027 5.7E-08 57.6 5.6 72 29-105 1-75 (225)
220 PRK12480 D-lactate dehydrogena 96.7 0.0092 2E-07 57.2 9.5 94 26-148 144-237 (330)
221 PRK12936 3-ketoacyl-(acyl-carr 96.7 0.014 3.1E-07 52.3 10.4 115 27-148 5-141 (245)
222 PRK12491 pyrroline-5-carboxyla 96.7 0.016 3.5E-07 54.0 10.6 67 29-104 3-71 (272)
223 PRK07576 short chain dehydroge 96.7 0.026 5.6E-07 51.8 12.0 117 28-148 9-146 (264)
224 PRK07024 short chain dehydroge 96.7 0.038 8.2E-07 50.4 13.0 34 29-64 3-36 (257)
225 PRK07774 short chain dehydroge 96.7 0.031 6.7E-07 50.4 12.3 115 28-146 6-145 (250)
226 PRK15461 NADH-dependent gamma- 96.7 0.0078 1.7E-07 56.7 8.5 64 29-104 2-65 (296)
227 PRK12825 fabG 3-ketoacyl-(acyl 96.7 0.014 3.1E-07 52.2 9.9 115 26-145 4-142 (249)
228 PLN02725 GDP-4-keto-6-deoxyman 96.7 0.0045 9.8E-08 57.7 6.8 91 33-141 2-97 (306)
229 PLN02712 arogenate dehydrogena 96.6 0.012 2.6E-07 61.6 10.4 66 26-104 50-116 (667)
230 PTZ00431 pyrroline carboxylate 96.6 0.011 2.4E-07 54.6 9.2 91 27-149 2-94 (260)
231 PRK06841 short chain dehydroge 96.6 0.017 3.6E-07 52.4 10.2 114 27-146 14-148 (255)
232 KOG2305 3-hydroxyacyl-CoA dehy 96.6 0.0024 5.3E-08 57.1 4.4 105 29-152 4-125 (313)
233 PRK08251 short chain dehydroge 96.6 0.083 1.8E-06 47.6 14.8 115 29-146 3-140 (248)
234 PRK08945 putative oxoacyl-(acy 96.6 0.037 8E-07 50.0 12.4 117 27-146 11-152 (247)
235 PRK08263 short chain dehydroge 96.6 0.0098 2.1E-07 54.9 8.8 111 29-145 4-135 (275)
236 COG2084 MmsB 3-hydroxyisobutyr 96.6 0.015 3.2E-07 54.5 9.8 65 29-104 1-65 (286)
237 PRK15469 ghrA bifunctional gly 96.6 0.022 4.8E-07 54.1 11.2 94 26-146 134-227 (312)
238 PRK05993 short chain dehydroge 96.6 0.017 3.7E-07 53.4 10.2 112 29-146 5-135 (277)
239 COG0677 WecC UDP-N-acetyl-D-ma 96.6 0.029 6.3E-07 54.3 11.7 113 29-155 10-139 (436)
240 PRK07060 short chain dehydroge 96.6 0.015 3.2E-07 52.3 9.5 117 26-146 7-137 (245)
241 PRK12481 2-deoxy-D-gluconate 3 96.6 0.04 8.6E-07 50.2 12.5 117 28-148 8-145 (251)
242 PRK12937 short chain dehydroge 96.6 0.034 7.4E-07 49.9 11.9 115 28-146 5-140 (245)
243 PRK09599 6-phosphogluconate de 96.6 0.015 3.3E-07 54.8 9.9 64 29-104 1-67 (301)
244 PRK07856 short chain dehydroge 96.6 0.031 6.8E-07 50.7 11.7 111 27-147 5-136 (252)
245 PRK08085 gluconate 5-dehydroge 96.6 0.019 4.1E-07 52.2 10.2 115 28-146 9-145 (254)
246 PRK05708 2-dehydropantoate 2-r 96.6 0.045 9.8E-07 51.8 13.1 119 28-173 2-125 (305)
247 PRK07890 short chain dehydroge 96.6 0.046 9.9E-07 49.6 12.7 115 28-146 5-141 (258)
248 TIGR01963 PHB_DH 3-hydroxybuty 96.6 0.034 7.4E-07 50.2 11.8 113 29-146 2-137 (255)
249 PRK12827 short chain dehydroge 96.6 0.05 1.1E-06 48.8 12.8 117 27-147 5-148 (249)
250 cd01487 E1_ThiF_like E1_ThiF_l 96.6 0.026 5.6E-07 49.0 10.4 33 30-64 1-33 (174)
251 PRK06181 short chain dehydroge 96.6 0.033 7.2E-07 50.8 11.7 116 29-148 2-139 (263)
252 PRK05866 short chain dehydroge 96.6 0.044 9.6E-07 51.3 12.7 36 27-64 39-74 (293)
253 PRK08265 short chain dehydroge 96.5 0.015 3.2E-07 53.3 9.3 112 28-146 6-137 (261)
254 PRK08628 short chain dehydroge 96.5 0.05 1.1E-06 49.4 12.8 117 25-145 4-139 (258)
255 PF02558 ApbA: Ketopantoate re 96.5 0.0077 1.7E-07 50.5 6.8 118 31-175 1-125 (151)
256 PRK05557 fabG 3-ketoacyl-(acyl 96.5 0.036 7.8E-07 49.6 11.6 117 27-147 4-143 (248)
257 PRK09291 short chain dehydroge 96.5 0.055 1.2E-06 49.0 12.9 113 29-146 3-132 (257)
258 PF04321 RmlD_sub_bind: RmlD s 96.5 0.0013 2.9E-08 61.5 2.3 98 29-145 1-100 (286)
259 PRK12746 short chain dehydroge 96.5 0.046 9.9E-07 49.5 12.3 115 28-146 6-147 (254)
260 PRK05650 short chain dehydroge 96.5 0.039 8.5E-07 50.6 11.8 114 29-147 1-137 (270)
261 PRK09134 short chain dehydroge 96.5 0.038 8.1E-07 50.4 11.6 114 28-145 9-145 (258)
262 PRK08589 short chain dehydroge 96.5 0.17 3.6E-06 46.6 16.0 116 27-148 5-143 (272)
263 PF01488 Shikimate_DH: Shikima 96.5 0.0095 2.1E-07 49.4 6.9 73 28-107 12-86 (135)
264 PRK06057 short chain dehydroge 96.5 0.013 2.9E-07 53.2 8.5 37 26-64 5-41 (255)
265 TIGR02356 adenyl_thiF thiazole 96.5 0.02 4.4E-07 50.9 9.3 37 26-64 19-55 (202)
266 PRK08507 prephenate dehydrogen 96.5 0.013 2.7E-07 54.6 8.4 66 29-104 1-66 (275)
267 PRK06197 short chain dehydroge 96.5 0.057 1.2E-06 50.7 13.0 117 27-146 15-152 (306)
268 PRK12935 acetoacetyl-CoA reduc 96.5 0.037 8E-07 49.9 11.3 115 28-146 6-143 (247)
269 PRK06101 short chain dehydroge 96.5 0.06 1.3E-06 48.5 12.6 114 29-146 2-128 (240)
270 PRK06124 gluconate 5-dehydroge 96.4 0.019 4.1E-07 52.2 9.3 118 27-148 10-149 (256)
271 COG4221 Short-chain alcohol de 96.4 0.14 3E-06 46.7 14.4 156 29-201 7-181 (246)
272 PRK12490 6-phosphogluconate de 96.4 0.023 5E-07 53.6 10.1 64 29-104 1-67 (299)
273 PRK07453 protochlorophyllide o 96.4 0.03 6.4E-07 53.1 10.8 114 28-145 6-144 (322)
274 PRK06138 short chain dehydroge 96.4 0.061 1.3E-06 48.5 12.4 113 28-146 5-140 (252)
275 PRK07074 short chain dehydroge 96.4 0.037 7.9E-07 50.3 11.0 112 29-146 3-136 (257)
276 PRK06500 short chain dehydroge 96.4 0.024 5.3E-07 51.0 9.6 111 28-145 6-136 (249)
277 PRK05867 short chain dehydroge 96.4 0.054 1.2E-06 49.2 11.9 114 28-145 9-145 (253)
278 cd05213 NAD_bind_Glutamyl_tRNA 96.4 0.022 4.8E-07 54.1 9.6 101 28-153 178-281 (311)
279 PRK09186 flagellin modificatio 96.4 0.037 8E-07 50.1 10.8 35 28-64 4-38 (256)
280 PRK05854 short chain dehydroge 96.4 0.091 2E-06 49.7 13.8 171 27-201 13-205 (313)
281 PF00899 ThiF: ThiF family; I 96.4 0.012 2.6E-07 48.7 6.8 35 28-64 2-36 (135)
282 PRK06128 oxidoreductase; Provi 96.4 0.081 1.8E-06 49.6 13.3 116 28-147 55-193 (300)
283 COG2910 Putative NADH-flavin r 96.4 0.025 5.5E-07 49.2 8.8 105 29-146 1-105 (211)
284 PRK12745 3-ketoacyl-(acyl-carr 96.4 0.082 1.8E-06 47.8 12.9 34 29-64 3-36 (256)
285 PLN02780 ketoreductase/ oxidor 96.3 0.046 1E-06 52.0 11.6 116 28-146 53-193 (320)
286 PRK06198 short chain dehydroge 96.3 0.081 1.8E-06 48.0 12.9 117 27-147 5-145 (260)
287 cd01065 NAD_bind_Shikimate_DH 96.3 0.019 4E-07 48.2 8.0 72 28-107 19-92 (155)
288 COG1893 ApbA Ketopantoate redu 96.3 0.016 3.4E-07 55.0 8.2 119 29-175 1-125 (307)
289 PRK08993 2-deoxy-D-gluconate 3 96.3 0.065 1.4E-06 48.7 12.1 117 27-147 9-146 (253)
290 PRK08644 thiamine biosynthesis 96.3 0.038 8.2E-07 49.6 10.2 35 27-63 27-61 (212)
291 PRK06463 fabG 3-ketoacyl-(acyl 96.3 0.068 1.5E-06 48.5 12.2 114 28-146 7-138 (255)
292 PRK12742 oxidoreductase; Provi 96.3 0.051 1.1E-06 48.5 11.1 155 28-201 6-174 (237)
293 PRK08642 fabG 3-ketoacyl-(acyl 96.3 0.042 9.1E-07 49.6 10.6 33 29-63 6-38 (253)
294 PRK05693 short chain dehydroge 96.3 0.037 8E-07 50.9 10.4 34 29-64 2-35 (274)
295 PRK05565 fabG 3-ketoacyl-(acyl 96.3 0.046 1E-06 49.0 10.8 115 28-146 5-142 (247)
296 COG0287 TyrA Prephenate dehydr 96.3 0.082 1.8E-06 49.5 12.6 67 28-104 3-72 (279)
297 PLN02712 arogenate dehydrogena 96.3 0.031 6.6E-07 58.6 10.8 66 26-104 367-433 (667)
298 PRK09242 tropinone reductase; 96.3 0.073 1.6E-06 48.3 12.2 117 28-147 9-148 (257)
299 PLN02503 fatty acyl-CoA reduct 96.3 0.056 1.2E-06 55.9 12.5 110 26-136 117-258 (605)
300 PRK13243 glyoxylate reductase; 96.3 0.022 4.8E-07 54.6 9.1 92 27-145 149-240 (333)
301 PRK08226 short chain dehydroge 96.3 0.094 2E-06 47.7 12.9 115 28-146 6-141 (263)
302 TIGR03325 BphB_TodD cis-2,3-di 96.3 0.034 7.3E-07 50.8 9.9 35 28-64 5-39 (262)
303 PRK07097 gluconate 5-dehydroge 96.3 0.2 4.4E-06 45.7 15.1 117 27-148 9-148 (265)
304 PRK08936 glucose-1-dehydrogena 96.3 0.12 2.6E-06 47.1 13.5 117 26-146 5-145 (261)
305 PRK07062 short chain dehydroge 96.2 0.15 3.2E-06 46.5 14.2 117 28-147 8-147 (265)
306 PRK08818 prephenate dehydrogen 96.2 0.027 5.9E-07 54.7 9.5 56 28-104 4-59 (370)
307 PRK07109 short chain dehydroge 96.2 0.23 5E-06 47.5 15.8 115 27-146 7-144 (334)
308 PRK08277 D-mannonate oxidoredu 96.2 0.24 5.2E-06 45.6 15.5 76 27-106 9-97 (278)
309 PRK07831 short chain dehydroge 96.2 0.47 1E-05 43.2 17.3 37 26-64 15-52 (262)
310 PRK06196 oxidoreductase; Provi 96.2 0.041 8.9E-07 52.0 10.5 112 27-146 25-156 (315)
311 PRK08063 enoyl-(acyl carrier p 96.2 0.11 2.4E-06 46.7 13.0 115 28-146 4-141 (250)
312 cd01483 E1_enzyme_family Super 96.2 0.047 1E-06 45.4 9.7 33 30-64 1-33 (143)
313 PLN02928 oxidoreductase family 96.2 0.022 4.9E-07 54.9 8.7 106 26-147 157-264 (347)
314 PF05368 NmrA: NmrA-like famil 96.2 0.014 3.1E-07 52.5 6.9 95 31-138 1-96 (233)
315 PF03949 Malic_M: Malic enzyme 96.2 0.0092 2E-07 54.8 5.6 101 29-149 26-145 (255)
316 cd01078 NAD_bind_H4MPT_DH NADP 96.2 0.016 3.4E-07 50.9 7.0 76 28-106 28-107 (194)
317 PRK06523 short chain dehydroge 96.2 0.009 2E-07 54.4 5.6 111 26-148 7-140 (260)
318 PRK12744 short chain dehydroge 96.2 0.21 4.5E-06 45.4 14.7 156 27-201 7-187 (257)
319 PRK07574 formate dehydrogenase 96.2 0.031 6.8E-07 54.6 9.6 95 26-145 190-284 (385)
320 PRK06179 short chain dehydroge 96.2 0.048 1E-06 49.9 10.5 111 29-147 5-133 (270)
321 PRK14106 murD UDP-N-acetylmura 96.2 0.041 9E-07 54.7 10.7 126 27-163 4-134 (450)
322 PRK05884 short chain dehydroge 96.2 0.022 4.7E-07 51.1 7.9 34 29-64 1-34 (223)
323 TIGR00873 gnd 6-phosphoglucona 96.2 0.022 4.7E-07 57.2 8.6 98 30-147 1-100 (467)
324 cd05312 NAD_bind_1_malic_enz N 96.1 0.024 5.1E-07 52.8 8.2 100 29-149 26-144 (279)
325 PRK07023 short chain dehydroge 96.1 0.017 3.8E-07 52.0 7.3 35 28-64 1-35 (243)
326 PRK03659 glutathione-regulated 96.1 0.057 1.2E-06 56.0 11.9 138 28-197 400-542 (601)
327 PRK06476 pyrroline-5-carboxyla 96.1 0.037 8.1E-07 50.9 9.5 68 29-104 1-69 (258)
328 PRK07454 short chain dehydroge 96.1 0.058 1.3E-06 48.5 10.6 115 28-147 6-143 (241)
329 PRK06953 short chain dehydroge 96.1 0.08 1.7E-06 47.1 11.4 114 29-147 2-131 (222)
330 PRK08703 short chain dehydroge 96.1 0.33 7.3E-06 43.4 15.6 36 27-64 5-40 (239)
331 PRK07792 fabG 3-ketoacyl-(acyl 96.1 0.094 2E-06 49.4 12.3 82 23-108 7-101 (306)
332 PRK09072 short chain dehydroge 96.1 0.14 3E-06 46.7 13.2 115 28-147 5-140 (263)
333 PF02826 2-Hacid_dh_C: D-isome 96.1 0.046 1E-06 47.5 9.4 100 21-147 29-129 (178)
334 PRK08264 short chain dehydroge 96.1 0.051 1.1E-06 48.6 10.1 116 28-148 6-135 (238)
335 PRK05872 short chain dehydroge 96.1 0.17 3.7E-06 47.3 14.0 115 27-146 8-143 (296)
336 COG1712 Predicted dinucleotide 96.1 0.055 1.2E-06 48.6 9.8 96 29-149 1-97 (255)
337 PRK05855 short chain dehydroge 96.1 0.12 2.7E-06 52.4 14.0 117 27-147 314-453 (582)
338 PRK06113 7-alpha-hydroxysteroi 96.1 0.2 4.4E-06 45.4 14.1 116 27-146 10-146 (255)
339 PRK08416 7-alpha-hydroxysteroi 96.1 0.36 7.8E-06 44.0 15.8 36 26-63 6-41 (260)
340 PRK06949 short chain dehydroge 96.1 0.057 1.2E-06 48.9 10.4 36 27-64 8-43 (258)
341 PRK07478 short chain dehydroge 96.1 0.11 2.3E-06 47.2 12.2 156 28-201 6-185 (254)
342 PRK07035 short chain dehydroge 96.1 0.088 1.9E-06 47.6 11.6 115 28-146 8-145 (252)
343 PRK07577 short chain dehydroge 96.1 0.052 1.1E-06 48.4 9.9 35 28-64 3-37 (234)
344 PRK00048 dihydrodipicolinate r 96.1 0.24 5.2E-06 45.7 14.5 144 28-206 1-148 (257)
345 PRK06935 2-deoxy-D-gluconate 3 96.0 0.071 1.5E-06 48.5 10.9 115 28-147 15-151 (258)
346 PRK15059 tartronate semialdehy 96.0 0.022 4.7E-07 53.7 7.5 63 29-104 1-63 (292)
347 KOG2666 UDP-glucose/GDP-mannos 96.0 0.018 3.9E-07 54.1 6.7 78 28-109 1-91 (481)
348 KOG1371 UDP-glucose 4-epimeras 96.0 0.067 1.5E-06 50.6 10.5 104 29-136 3-119 (343)
349 TIGR01830 3oxo_ACP_reduc 3-oxo 96.0 0.045 9.7E-07 48.8 9.3 114 31-148 1-137 (239)
350 COG1091 RfbD dTDP-4-dehydrorha 96.0 0.035 7.5E-07 51.8 8.6 95 29-145 1-99 (281)
351 PRK07825 short chain dehydroge 96.0 0.14 3E-06 47.0 12.7 112 28-147 5-138 (273)
352 PRK07677 short chain dehydroge 96.0 0.19 4E-06 45.6 13.3 114 29-146 2-138 (252)
353 TIGR02415 23BDH acetoin reduct 96.0 0.077 1.7E-06 47.9 10.7 112 30-145 2-136 (254)
354 PRK05479 ketol-acid reductoiso 96.0 0.048 1E-06 52.2 9.6 66 27-104 16-81 (330)
355 PF03435 Saccharop_dh: Sacchar 96.0 0.009 1.9E-07 58.3 4.8 73 31-106 1-77 (386)
356 COG0345 ProC Pyrroline-5-carbo 96.0 0.041 8.9E-07 51.0 8.8 96 28-148 1-98 (266)
357 PRK12747 short chain dehydroge 96.0 0.33 7.2E-06 43.8 14.8 34 28-63 4-37 (252)
358 PRK07985 oxidoreductase; Provi 95.9 0.48 1E-05 44.3 16.3 117 27-147 48-187 (294)
359 PRK13304 L-aspartate dehydroge 95.9 0.058 1.3E-06 50.0 9.8 68 28-104 1-69 (265)
360 PRK06139 short chain dehydroge 95.9 0.1 2.3E-06 49.9 11.8 114 28-146 7-143 (330)
361 PRK06077 fabG 3-ketoacyl-(acyl 95.9 0.23 4.9E-06 44.7 13.5 33 28-62 6-38 (252)
362 PRK08324 short chain dehydroge 95.9 0.069 1.5E-06 56.2 11.4 114 28-146 422-558 (681)
363 KOG1205 Predicted dehydrogenas 95.9 0.11 2.5E-06 48.5 11.4 121 27-151 11-155 (282)
364 PRK08339 short chain dehydroge 95.9 0.31 6.7E-06 44.7 14.5 116 29-148 9-146 (263)
365 PRK13302 putative L-aspartate 95.9 0.024 5.1E-07 52.8 7.0 71 26-105 4-76 (271)
366 PRK06114 short chain dehydroge 95.9 0.12 2.5E-06 47.1 11.5 114 28-146 8-145 (254)
367 PRK08220 2,3-dihydroxybenzoate 95.9 0.051 1.1E-06 49.1 9.1 36 27-64 7-42 (252)
368 PRK07688 thiamine/molybdopteri 95.9 0.058 1.3E-06 51.9 9.8 37 26-64 22-58 (339)
369 PRK08306 dipicolinate synthase 95.9 0.036 7.9E-07 52.3 8.2 66 28-104 152-218 (296)
370 PRK06398 aldose dehydrogenase; 95.8 0.056 1.2E-06 49.4 9.3 149 27-201 5-171 (258)
371 PRK12475 thiamine/molybdopteri 95.8 0.032 7E-07 53.6 7.9 77 26-104 22-124 (338)
372 PRK12743 oxidoreductase; Provi 95.8 0.33 7.2E-06 44.1 14.3 115 29-147 3-141 (256)
373 PRK08605 D-lactate dehydrogena 95.8 0.031 6.7E-07 53.6 7.6 65 26-104 144-208 (332)
374 TIGR02685 pter_reduc_Leis pter 95.8 0.53 1.1E-05 43.1 15.6 32 30-63 3-34 (267)
375 PLN03139 formate dehydrogenase 95.8 0.048 1E-06 53.3 8.9 95 26-145 197-291 (386)
376 PRK12824 acetoacetyl-CoA reduc 95.8 0.16 3.6E-06 45.4 12.0 114 29-147 3-140 (245)
377 PRK08217 fabG 3-ketoacyl-(acyl 95.7 0.077 1.7E-06 47.7 9.7 35 28-64 5-39 (253)
378 PRK08177 short chain dehydroge 95.7 0.057 1.2E-06 48.1 8.7 34 29-64 2-35 (225)
379 PRK07904 short chain dehydroge 95.7 0.14 3.1E-06 46.7 11.5 115 28-146 8-146 (253)
380 TIGR01745 asd_gamma aspartate- 95.7 0.043 9.3E-07 53.1 8.2 71 29-105 1-73 (366)
381 TIGR03649 ergot_EASG ergot alk 95.7 0.047 1E-06 50.6 8.3 33 30-64 1-33 (285)
382 cd00757 ThiF_MoeB_HesA_family 95.7 0.068 1.5E-06 48.4 9.2 37 26-64 19-55 (228)
383 PRK09009 C factor cell-cell si 95.7 0.35 7.7E-06 43.1 13.8 71 29-107 1-78 (235)
384 KOG1201 Hydroxysteroid 17-beta 95.7 0.23 5E-06 46.5 12.6 117 27-149 37-176 (300)
385 TIGR02371 ala_DH_arch alanine 95.7 0.042 9.1E-07 52.5 8.0 70 29-104 129-200 (325)
386 cd00762 NAD_bind_malic_enz NAD 95.7 0.027 5.9E-07 51.7 6.4 120 29-174 26-167 (254)
387 KOG0409 Predicted dehydrogenas 95.7 0.035 7.6E-07 51.9 7.1 68 28-107 35-102 (327)
388 PRK06125 short chain dehydroge 95.6 0.62 1.3E-05 42.3 15.3 115 28-146 7-140 (259)
389 PF01113 DapB_N: Dihydrodipico 95.6 0.035 7.7E-07 45.3 6.3 71 29-103 1-74 (124)
390 PRK05786 fabG 3-ketoacyl-(acyl 95.6 0.1 2.2E-06 46.6 9.9 35 28-64 5-39 (238)
391 PRK06947 glucose-1-dehydrogena 95.6 0.34 7.5E-06 43.5 13.4 32 29-62 3-34 (248)
392 PRK06200 2,3-dihydroxy-2,3-dih 95.6 0.049 1.1E-06 49.7 7.9 35 28-64 6-40 (263)
393 PRK00421 murC UDP-N-acetylmura 95.6 0.11 2.5E-06 51.9 11.0 127 28-167 7-136 (461)
394 COG0136 Asd Aspartate-semialde 95.6 0.058 1.3E-06 51.4 8.3 73 28-105 1-75 (334)
395 PRK14806 bifunctional cyclohex 95.6 0.067 1.5E-06 56.8 9.8 92 29-145 4-97 (735)
396 PRK08291 ectoine utilization p 95.6 0.048 1E-06 52.2 7.9 71 29-104 133-205 (330)
397 PRK06940 short chain dehydroge 95.5 0.24 5.2E-06 45.8 12.4 112 30-148 4-128 (275)
398 PRK06598 aspartate-semialdehyd 95.5 0.064 1.4E-06 52.0 8.7 72 28-105 1-74 (369)
399 cd05311 NAD_bind_2_malic_enz N 95.5 0.085 1.8E-06 47.8 9.0 97 28-149 25-132 (226)
400 TIGR02355 moeB molybdopterin s 95.5 0.087 1.9E-06 48.2 9.1 36 27-64 23-58 (240)
401 cd01079 NAD_bind_m-THF_DH NAD 95.5 0.051 1.1E-06 47.9 7.2 83 19-107 53-137 (197)
402 PRK08223 hypothetical protein; 95.5 0.057 1.2E-06 50.6 7.9 36 27-64 26-61 (287)
403 PF02423 OCD_Mu_crystall: Orni 95.5 0.035 7.5E-07 52.9 6.6 68 29-103 129-199 (313)
404 PRK09496 trkA potassium transp 95.5 0.066 1.4E-06 53.2 8.9 70 29-104 1-73 (453)
405 PRK07775 short chain dehydroge 95.5 0.35 7.6E-06 44.5 13.2 35 28-64 10-44 (274)
406 TIGR02853 spore_dpaA dipicolin 95.5 0.064 1.4E-06 50.4 8.3 95 28-150 151-246 (287)
407 PLN02350 phosphogluconate dehy 95.5 0.1 2.2E-06 52.7 10.2 98 27-148 5-110 (493)
408 TIGR00465 ilvC ketol-acid redu 95.5 0.09 1.9E-06 50.1 9.3 65 28-104 3-67 (314)
409 PRK09424 pntA NAD(P) transhydr 95.4 0.1 2.3E-06 52.8 10.1 106 25-147 162-287 (509)
410 PRK08618 ornithine cyclodeamin 95.4 0.049 1.1E-06 52.0 7.5 71 29-104 128-200 (325)
411 PRK12938 acetyacetyl-CoA reduc 95.4 0.19 4.2E-06 45.1 11.1 114 28-146 3-140 (246)
412 PRK06718 precorrin-2 dehydroge 95.4 0.094 2E-06 46.7 8.7 73 27-107 9-81 (202)
413 cd01485 E1-1_like Ubiquitin ac 95.4 0.11 2.5E-06 45.9 9.2 35 28-64 19-53 (198)
414 TIGR01082 murC UDP-N-acetylmur 95.4 0.11 2.3E-06 51.9 10.0 129 30-171 1-132 (448)
415 PRK08261 fabG 3-ketoacyl-(acyl 95.4 0.2 4.4E-06 49.8 12.0 117 28-146 210-343 (450)
416 PRK14874 aspartate-semialdehyd 95.4 0.035 7.7E-07 53.3 6.3 71 28-105 1-72 (334)
417 PRK06407 ornithine cyclodeamin 95.4 0.055 1.2E-06 51.2 7.5 70 29-103 118-189 (301)
418 PLN02383 aspartate semialdehyd 95.3 0.035 7.6E-07 53.5 6.1 72 27-105 6-78 (344)
419 PRK06123 short chain dehydroge 95.3 0.29 6.3E-06 43.9 11.9 115 30-148 4-145 (248)
420 PRK05690 molybdopterin biosynt 95.3 0.15 3.4E-06 46.7 10.0 37 26-64 30-66 (245)
421 TIGR01327 PGDH D-3-phosphoglyc 95.3 0.082 1.8E-06 53.9 8.9 66 26-104 136-201 (525)
422 PLN02494 adenosylhomocysteinas 95.3 0.095 2E-06 52.4 9.0 90 29-149 255-345 (477)
423 PRK06484 short chain dehydroge 95.3 0.16 3.5E-06 51.3 11.0 156 28-201 269-442 (520)
424 PRK06171 sorbitol-6-phosphate 95.2 0.029 6.4E-07 51.2 5.2 36 27-64 8-43 (266)
425 PRK06550 fabG 3-ketoacyl-(acyl 95.2 0.54 1.2E-05 41.9 13.2 107 29-146 6-127 (235)
426 PRK05671 aspartate-semialdehyd 95.2 0.036 7.7E-07 53.3 5.7 72 27-105 3-75 (336)
427 PRK06079 enoyl-(acyl carrier p 95.2 0.19 4.1E-06 45.7 10.4 37 26-64 5-43 (252)
428 PRK07340 ornithine cyclodeamin 95.2 0.062 1.3E-06 50.9 7.3 69 29-104 126-196 (304)
429 PRK03562 glutathione-regulated 95.2 0.22 4.8E-06 51.9 11.9 137 29-196 401-541 (621)
430 PRK06436 glycerate dehydrogena 95.1 0.1 2.2E-06 49.5 8.5 95 25-149 119-215 (303)
431 TIGR01724 hmd_rel H2-forming N 95.1 0.15 3.2E-06 48.4 9.4 66 29-104 1-89 (341)
432 PRK05599 hypothetical protein; 95.1 1.9 4.1E-05 39.0 16.7 116 29-148 1-139 (246)
433 PRK07201 short chain dehydroge 95.1 0.2 4.4E-06 52.1 11.5 115 27-146 370-509 (657)
434 TIGR01850 argC N-acetyl-gamma- 95.1 0.045 9.7E-07 52.8 6.1 73 29-104 1-76 (346)
435 PRK06141 ornithine cyclodeamin 95.1 0.088 1.9E-06 50.1 8.0 71 28-104 125-197 (314)
436 TIGR02992 ectoine_eutC ectoine 95.0 0.082 1.8E-06 50.6 7.6 71 29-104 130-202 (326)
437 TIGR01035 hemA glutamyl-tRNA r 95.0 0.097 2.1E-06 51.8 8.2 102 28-152 180-284 (417)
438 PRK06728 aspartate-semialdehyd 95.0 0.038 8.3E-07 53.2 5.1 71 28-105 5-77 (347)
439 PRK13581 D-3-phosphoglycerate 94.9 0.11 2.5E-06 52.9 8.8 65 26-104 138-202 (526)
440 PRK07589 ornithine cyclodeamin 94.9 0.086 1.9E-06 50.9 7.5 70 29-104 130-201 (346)
441 PLN02968 Probable N-acetyl-gam 94.9 0.062 1.3E-06 52.6 6.5 75 27-104 37-112 (381)
442 cd01075 NAD_bind_Leu_Phe_Val_D 94.9 0.13 2.9E-06 45.5 8.1 39 23-64 23-61 (200)
443 PF02882 THF_DHG_CYH_C: Tetrah 94.9 0.1 2.2E-06 44.7 7.0 56 27-107 35-90 (160)
444 TIGR01831 fabG_rel 3-oxoacyl-( 94.9 0.75 1.6E-05 41.0 13.2 114 31-148 1-138 (239)
445 PRK06719 precorrin-2 dehydroge 94.9 0.23 5E-06 42.3 9.2 68 26-104 11-78 (157)
446 PRK02006 murD UDP-N-acetylmura 94.9 0.65 1.4E-05 47.0 14.1 130 28-163 7-147 (498)
447 PRK08017 oxidoreductase; Provi 94.9 0.19 4E-06 45.5 9.3 34 29-64 3-36 (256)
448 PRK14194 bifunctional 5,10-met 94.8 0.074 1.6E-06 50.1 6.6 56 27-107 158-213 (301)
449 cd01492 Aos1_SUMO Ubiquitin ac 94.8 0.25 5.5E-06 43.7 9.8 36 27-64 20-55 (197)
450 cd00401 AdoHcyase S-adenosyl-L 94.8 0.17 3.8E-06 49.9 9.5 89 28-147 202-291 (413)
451 PF07993 NAD_binding_4: Male s 94.8 0.066 1.4E-06 48.9 6.2 112 33-146 1-135 (249)
452 PRK06823 ornithine cyclodeamin 94.8 0.11 2.5E-06 49.4 7.9 70 29-104 129-200 (315)
453 PRK07578 short chain dehydroge 94.8 0.26 5.7E-06 42.9 9.8 104 29-145 1-111 (199)
454 PRK04690 murD UDP-N-acetylmura 94.8 0.23 4.9E-06 49.9 10.5 126 28-163 8-141 (468)
455 PRK00141 murD UDP-N-acetylmura 94.8 0.29 6.2E-06 49.3 11.2 125 28-163 15-147 (473)
456 COG1064 AdhP Zn-dependent alco 94.8 0.69 1.5E-05 44.4 13.1 113 28-173 167-284 (339)
457 TIGR01829 AcAcCoA_reduct aceto 94.8 0.52 1.1E-05 42.0 11.8 113 30-147 2-138 (242)
458 PRK06484 short chain dehydroge 94.8 0.23 5E-06 50.2 10.5 115 29-147 6-142 (520)
459 TIGR00518 alaDH alanine dehydr 94.7 0.095 2.1E-06 51.1 7.3 75 27-107 166-241 (370)
460 PRK06901 aspartate-semialdehyd 94.7 0.022 4.7E-07 54.0 2.7 70 27-105 2-73 (322)
461 PRK08040 putative semialdehyde 94.7 0.053 1.1E-06 52.1 5.4 72 27-105 3-75 (336)
462 COG0771 MurD UDP-N-acetylmuram 94.7 0.16 3.4E-06 50.6 8.7 128 28-163 7-136 (448)
463 PRK00436 argC N-acetyl-gamma-g 94.7 0.072 1.6E-06 51.3 6.2 34 28-61 2-35 (343)
464 smart00859 Semialdhyde_dh Semi 94.6 0.29 6.2E-06 39.5 8.9 33 30-63 1-34 (122)
465 PRK00045 hemA glutamyl-tRNA re 94.6 0.15 3.3E-06 50.5 8.6 103 28-152 182-287 (423)
466 PRK07877 hypothetical protein; 94.6 0.14 3.1E-06 53.9 8.8 76 27-104 106-204 (722)
467 PRK01710 murD UDP-N-acetylmura 94.6 0.21 4.6E-06 49.9 9.7 124 29-163 15-143 (458)
468 TIGR01692 HIBADH 3-hydroxyisob 94.6 0.12 2.7E-06 48.3 7.5 60 33-104 1-60 (288)
469 PRK04308 murD UDP-N-acetylmura 94.6 0.2 4.2E-06 49.9 9.3 128 28-163 5-136 (445)
470 PTZ00075 Adenosylhomocysteinas 94.5 0.17 3.8E-06 50.6 8.7 90 27-147 253-343 (476)
471 PRK06483 dihydromonapterin red 94.5 0.42 9.1E-06 42.7 10.6 34 29-64 3-36 (236)
472 COG0002 ArgC Acetylglutamate s 94.5 0.07 1.5E-06 50.9 5.6 73 28-103 2-77 (349)
473 cd01080 NAD_bind_m-THF_DH_Cycl 94.5 0.096 2.1E-06 45.2 6.1 55 27-107 43-98 (168)
474 PRK08862 short chain dehydroge 94.5 1.1 2.4E-05 40.2 13.2 115 28-146 5-144 (227)
475 TIGR01470 cysG_Nterm siroheme 94.5 0.3 6.6E-06 43.5 9.3 71 28-106 9-79 (205)
476 COG0111 SerA Phosphoglycerate 94.4 0.13 2.8E-06 49.2 7.3 71 21-104 135-205 (324)
477 PRK02705 murD UDP-N-acetylmura 94.4 0.21 4.7E-06 49.7 9.2 124 30-163 2-135 (459)
478 PRK08762 molybdopterin biosynt 94.4 0.13 2.8E-06 50.2 7.4 35 27-63 134-168 (376)
479 PRK05476 S-adenosyl-L-homocyst 94.4 0.3 6.5E-06 48.4 9.9 93 27-149 211-303 (425)
480 PRK15116 sulfur acceptor prote 94.4 0.45 9.7E-06 44.3 10.5 35 28-64 30-64 (268)
481 PRK05600 thiamine biosynthesis 94.3 0.25 5.4E-06 48.2 9.2 37 26-64 39-75 (370)
482 TIGR01087 murD UDP-N-acetylmur 94.3 0.18 4E-06 49.9 8.5 123 30-163 1-128 (433)
483 PRK07984 enoyl-(acyl carrier p 94.3 2.2 4.8E-05 39.2 15.1 156 28-201 6-187 (262)
484 PF02254 TrkA_N: TrkA-N domain 94.3 0.23 5E-06 39.4 7.5 93 31-146 1-97 (116)
485 cd01491 Ube1_repeat1 Ubiquitin 94.3 0.33 7.1E-06 45.6 9.5 75 27-104 18-113 (286)
486 PRK06199 ornithine cyclodeamin 94.3 0.15 3.4E-06 49.7 7.6 71 29-103 156-230 (379)
487 PRK05597 molybdopterin biosynt 94.2 0.33 7.2E-06 47.0 9.8 37 26-64 26-62 (355)
488 PRK07041 short chain dehydroge 94.2 0.45 9.8E-06 42.2 10.1 107 33-145 2-123 (230)
489 TIGR03736 PRTRC_ThiF PRTRC sys 94.2 0.57 1.2E-05 43.0 10.7 37 27-64 10-55 (244)
490 PF03059 NAS: Nicotianamine sy 94.2 0.25 5.3E-06 46.1 8.4 77 28-105 121-201 (276)
491 PRK08303 short chain dehydroge 94.2 2.3 5E-05 40.0 15.2 36 26-63 6-41 (305)
492 PRK09730 putative NAD(P)-bindi 94.2 0.79 1.7E-05 40.9 11.6 30 29-60 2-31 (247)
493 PF13241 NAD_binding_7: Putati 94.1 0.49 1.1E-05 37.2 8.9 64 27-105 6-69 (103)
494 COG1052 LdhA Lactate dehydroge 94.1 0.34 7.3E-06 46.3 9.4 98 21-145 139-236 (324)
495 COG2423 Predicted ornithine cy 94.1 0.13 2.8E-06 49.2 6.6 70 29-103 131-202 (330)
496 PLN02306 hydroxypyruvate reduc 94.1 0.35 7.6E-06 47.4 9.6 102 26-146 163-273 (386)
497 COG0702 Predicted nucleoside-d 94.1 0.11 2.4E-06 47.3 5.9 74 29-107 1-74 (275)
498 TIGR00936 ahcY adenosylhomocys 94.0 0.37 8E-06 47.5 9.7 91 27-147 194-284 (406)
499 PRK06046 alanine dehydrogenase 94.0 0.18 4E-06 48.2 7.5 70 29-104 130-201 (326)
500 PRK07878 molybdopterin biosynt 94.0 0.35 7.6E-06 47.5 9.6 36 27-64 41-76 (392)
No 1
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=100.00 E-value=9.9e-68 Score=497.34 Aligned_cols=309 Identities=60% Similarity=0.929 Sum_probs=275.9
Q ss_pred eEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCCCCC
Q 019519 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRK 109 (340)
Q Consensus 30 KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~~~~ 109 (340)
||+||||+|+||+++++.|+.+++++||+|+|++++.|+++||+|.....++..+++.+|++++++|||+||+++|.|++
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~~~~~~~~~~~daDivvitaG~~~~ 80 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFSGEEGLENALKGADVVVIPAGVPRK 80 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEecCCCchHHHcCCCCEEEEeCCCCCC
Confidence 79999988999999999999999999999999998889999999987544566433223567899999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHH-HHHHhCCCCCCceEeccchhHHHHHHHHHHH
Q 019519 110 PGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAE-VFKKAGTYNEKKLFGVTTLDVVRAKTFYAGK 188 (340)
Q Consensus 110 ~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~-~~~~sg~~~~~kviG~~~ld~~R~~~~la~~ 188 (340)
+|++|.+++..|.++++++++.|.+++|++++|++|||+|++++++++ +++.+| +|++||||+|.||++||++++|++
T Consensus 81 ~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsNPvDv~~~i~t~~~~~~sg-~p~~rViG~g~LDsaR~r~~la~~ 159 (312)
T TIGR01772 81 PGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITNPVNSTVPIAAEVLKKKGV-YDPNKLFGVTTLDIVRANTFVAEL 159 (312)
T ss_pred CCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecCchhhHHHHHHHHHHHhcC-CChHHEEeeecchHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999995553332 366777 999999999889999999999999
Q ss_pred cCCCCCCCceeEEEecCCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhcCCCCccchHHHHHHHHHHHHHc
Q 019519 189 ANVNVAEVNVPVVGGHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLK 268 (340)
Q Consensus 189 l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~l~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~li~ai~~ 268 (340)
+++++++|+++||||||+++++|+||++++...+++++++++.+++++++++|++.++|||+|+||+|.++++++++|++
T Consensus 160 l~v~~~~v~~~ViGeHg~~s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~gkg~t~~~ia~a~~~iv~ail~ 239 (312)
T TIGR01772 160 KGKDPMEVNVPVIGGHSGETIIPLISQCPGKVLFTEDQLEALIHRIQNAGTEVVKAKAGAGSATLSMAFAGARFVLSLVR 239 (312)
T ss_pred hCCCHHHeEEEEEEecCCCccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCccCCCChhHHHHHHHHHHHHHHHH
Confidence 99999999999999998668999999998643455666899999999999999997667899999999999999999997
Q ss_pred CCCCCCcEEEeeeeeCCC-CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 019519 269 GLNGVPDVVECSFVQSTV-TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEKLKPELKASIEKGVKFAN 339 (340)
Q Consensus 269 ~~~~~~~v~~~~~~~g~~-~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~ 339 (340)
+..+++.++|+++++|+| ++|+|||+||++|++|+++++++++|+++|+++|++|++.|++.++++++|++
T Consensus 240 ~~~d~~~v~~~s~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~S~~~i~~~~~~g~~~~~ 311 (312)
T TIGR01772 240 GLKGEEGVVECAYVESDGVTEATFFATPLLLGKNGVEKRLGIGKLSSFEEKMLNGALPELKKNIKKGEEFVA 311 (312)
T ss_pred hhCCCccEEEEEEEccCCCcCceEEEEEEEEcCCeeEEEEccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 533344688888888888 78999999999999999999887579999999999999999999999999975
No 2
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=100.00 E-value=1.1e-67 Score=490.91 Aligned_cols=297 Identities=43% Similarity=0.608 Sum_probs=270.4
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCC--ceEEEEecCCccccccCCCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTR--SEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~--~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
+||+|||| |+||+++++.|+..++..|++|+|+++ ++|.++||.|+... ....... +.| +++++|||+||++|
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~-~~~-y~~~~~aDiVvitA 77 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITG-DGD-YEDLKGADIVVITA 77 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEec-CCC-hhhhcCCCEEEEeC
Confidence 59999998 999999999998777777999999996 79999999999742 2333332 245 58899999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec-cchhHHHHHH
Q 019519 105 GVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDVVRAKT 183 (340)
Q Consensus 105 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~-~~ld~~R~~~ 183 (340)
|.||||||+|+|++..|++|+++++++|.++|||++++++|||+|+|||++ |+.+| +|++||||+ |.||++||++
T Consensus 78 G~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvtNPvD~~ty~~---~k~sg-~p~~rvig~gt~LDsaR~~~ 153 (313)
T COG0039 78 GVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVTNPVDILTYIA---MKFSG-FPKNRVIGSGTVLDSARFRT 153 (313)
T ss_pred CCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEecCcHHHHHHHH---HHhcC-CCccceecccchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998 89999 999999999 8999999999
Q ss_pred HHHHHcCCCCCCCceeEEEecCCCccccccccCCCCC-C-------CChHHHHHHHHHHhcchhhhhhhhcCCCCccchH
Q 019519 184 FYAGKANVNVAEVNVPVVGGHAGITILPLFSQATPKA-N-------LADEDIKALTKRTQDGGTEVVEAKAGKGSATLSM 255 (340)
Q Consensus 184 ~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~-------~~~~~~~~l~~~v~~~~~~i~~~~~~kg~~~~s~ 255 (340)
++|+++++++++|+++|+|+||+ ++||+||++++++ + .++++++++.++|+++|++|++.| |.| ++||+
T Consensus 154 ~lae~~~v~~~~V~~~ViGeHGd-t~vp~~S~a~v~G~pl~~~~~~~~~~~~~~i~~~v~~~g~eII~~k-G~~-t~~~~ 230 (313)
T COG0039 154 FLAEKLGVSPKDVHAYVIGEHGD-TMVPLWSQATVGGKPLEELLKEDTEEDLEELIERVRNAGAEIIEAK-GAG-TYYGP 230 (313)
T ss_pred HHHHHhCCChhHceeeEeccCCC-ceEEeeeeeeECCEEHHHHhhcccHhHHHHHHHHHHhhHHHHHHcc-Ccc-chhhH
Confidence 99999999999999999999999 9999999999975 2 223567899999999999999976 444 99999
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEee-eeeCCC-CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 019519 256 AYAGAIFADACLKGLNGVPDVVECS-FVQSTV-TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEKLKPELKASIEK 333 (340)
Q Consensus 256 A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~~~ 333 (340)
|.++++++++|++|++ +++|++ +++|+| ++|+|||+||++|++|+++++++ +|+++|+++|++|++.||+.++.
T Consensus 231 A~a~a~~~~ail~d~~---~vl~~s~~l~G~yg~~dv~~gvP~~lg~~Gv~~iie~-~l~~~E~~~l~~s~~~lk~~i~~ 306 (313)
T COG0039 231 AAALARMVEAILRDEK---RVLPVSVYLDGEYGVEDVYFGVPAVLGKNGVEEILEL-LLSDDEQEKLDKSAEELKKNIEL 306 (313)
T ss_pred HHHHHHHHHHHHcCCC---ceEEEEEeecCccCcCCeEEEeeEEEcCCCcEEEecC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999973 578886 689999 89999999999999999999998 99999999999999999999999
Q ss_pred Hhhhhh
Q 019519 334 GVKFAN 339 (340)
Q Consensus 334 ~~~~~~ 339 (340)
..++++
T Consensus 307 ~~~~~~ 312 (313)
T COG0039 307 VKELVL 312 (313)
T ss_pred HHHhhc
Confidence 988765
No 3
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=2.4e-67 Score=493.91 Aligned_cols=308 Identities=67% Similarity=1.023 Sum_probs=274.8
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPR 108 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~~~ 108 (340)
|||+||||+|+||+++++.|+.+++++||+|+|++.++|+++||+|+..+.++....+++|++++++|||+||+|||.||
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~~~~~~y~~~~daDivvitaG~~~ 80 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYLGPEELKKALKGADVVVIPAGVPR 80 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEEecCCCchHHhcCCCCEEEEeCCCCC
Confidence 69999998899999999999999999999999998678999999999754566653233466799999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHH-HHHhCCCCCCceEeccchhHHHHHHHHHH
Q 019519 109 KPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEV-FKKAGTYNEKKLFGVTTLDVVRAKTFYAG 187 (340)
Q Consensus 109 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~-~~~sg~~~~~kviG~~~ld~~R~~~~la~ 187 (340)
++|++|+|++..|.++++++++.|.+++|++|+|++|||+|+||++++++ ++.+| +|++||||+|.||++|+++++|+
T Consensus 81 k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t~~~~~~s~-~p~~rviG~~~LDs~R~~~~la~ 159 (310)
T cd01337 81 KPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPVNSTVPIAAEVLKKAGV-YDPKRLFGVTTLDVVRANTFVAE 159 (310)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchhhHHHHHHHHHHHhcC-CCHHHEEeeechHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999985544332 67777 99999999988999999999999
Q ss_pred HcCCCCCCCceeEEEec-CCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhcCCCCccchHHHHHHHHHHHH
Q 019519 188 KANVNVAEVNVPVVGGH-AGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADAC 266 (340)
Q Consensus 188 ~l~v~~~~v~~~v~G~h-g~~~~vp~~s~~~v~~~~~~~~~~~l~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~li~ai 266 (340)
++|+++++|++++|||| |+ +++|+||++.+...+++++++++.+++++++++|++.+.|||+|+||+|.++++++++|
T Consensus 160 ~l~v~~~~V~~~v~GeHsGd-s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~gkg~t~~~~a~a~~~iv~aI 238 (310)
T cd01337 160 LLGLDPAKVNVPVIGGHSGV-TILPLLSQCQPPFTFDQEEIEALTHRIQFGGDEVVKAKAGAGSATLSMAYAGARFANSL 238 (310)
T ss_pred HhCcCHHHEEEEEEecCCCC-ceecccccccccccCCHHHHHHHHHHHHHHHHHHHhCccCCCCcchhHHHHHHHHHHHH
Confidence 99999999999999999 77 99999999987545666668999999999999999976678999999999999999999
Q ss_pred HcCCCCCCcEEEeeeeeCCCCCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 019519 267 LKGLNGVPDVVECSFVQSTVTELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEKLKPELKASIEKGVKFA 338 (340)
Q Consensus 267 ~~~~~~~~~v~~~~~~~g~~~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~ 338 (340)
++|..+++.++++++++++-.+|+|+|+||++|++|+++++++++|+++|+++|++|++.|++.++++++|+
T Consensus 239 l~~~~~~~~~~~~s~~~~~g~~~v~~s~P~~ig~~Gv~~i~~l~~L~~~E~~~l~~S~~~i~~~~~~g~~~~ 310 (310)
T cd01337 239 LRGLKGEKGVIECAYVESDVTEAPFFATPVELGKNGVEKNLGLGKLNDYEKKLLEAALPELKKNIEKGVDFV 310 (310)
T ss_pred HHhcCCCcceEEEEEEeccCCCceEEEEEEEEeCCeEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhhhcccC
Confidence 987555455777776665435789999999999999999988734999999999999999999999999884
No 4
>PTZ00325 malate dehydrogenase; Provisional
Probab=100.00 E-value=3.4e-64 Score=474.67 Aligned_cols=310 Identities=58% Similarity=0.891 Sum_probs=278.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~ 106 (340)
+|.||+||||+|+||+++++.|+..+..+||+|+|++.++++++||.|......+...++..+++++++|||+||+++|.
T Consensus 7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVitaG~ 86 (321)
T PTZ00325 7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICAGV 86 (321)
T ss_pred CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECCCC
Confidence 35699999988999999999999888899999999955889999999987644555443223446899999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHH-HHHHHhCCCCCCceEeccchhHHHHHHHH
Q 019519 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAA-EVFKKAGTYNEKKLFGVTTLDVVRAKTFY 185 (340)
Q Consensus 107 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~-~~~~~sg~~~~~kviG~~~ld~~R~~~~l 185 (340)
|++++++|.+++..|+++++++++.|++++|+++++++|||+|+++++++ .+++.+| +||+||||++.||++||++++
T Consensus 87 ~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg-~p~~~viG~g~LDs~R~r~~l 165 (321)
T PTZ00325 87 PRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGV-YDPRKLFGVTTLDVVRARKFV 165 (321)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccC-CChhheeechhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999974 2246777 999999999779999999999
Q ss_pred HHHcCCCCCCCceeEEEecCCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhcCCCCccchHHHHHHHHHHH
Q 019519 186 AGKANVNVAEVNVPVVGGHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADA 265 (340)
Q Consensus 186 a~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~l~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~li~a 265 (340)
|+++|++|++|+++||||||++++||+||++ +.++++++++++.+++++++++|++.|.+||+|+||+|.++++++++
T Consensus 166 a~~l~v~~~~V~~~VlGeHGd~s~v~~~S~~--g~~l~~~~~~~i~~~v~~~g~~Ii~~k~~kg~t~~g~a~a~~~i~~a 243 (321)
T PTZ00325 166 AEALGMNPYDVNVPVVGGHSGVTIVPLLSQT--GLSLPEEQVEQITHRVQVGGDEVVKAKEGAGSATLSMAYAAAEWSTS 243 (321)
T ss_pred HHHhCcChhheEEEEEeecCCcccccchhcc--CCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHH
Confidence 9999999999999999999984699999999 44677777999999999999999998667799999999999999999
Q ss_pred HHcCCCCCCcEEEeeeeeCCC-CCccEEEEeEEEcCCceEEEec-CCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhC
Q 019519 266 CLKGLNGVPDVVECSFVQSTV-TELPFFASKVRLGKNGVEEVLG-LGPLSDFEQEGLEKLKPELKASIEKGVKFANA 340 (340)
Q Consensus 266 i~~~~~~~~~v~~~~~~~g~~-~~~~~~svP~~ig~~Gv~~i~~-~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~~ 340 (340)
|+++..+++.++++++++|+| .+|+|+|+||++|++|++++++ + +|+++|+++|++|++.|++.++++++|+++
T Consensus 244 il~~~~~~~~v~~~~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~~-~L~~~E~~~l~~S~~~i~~~~~~~~~~~~~ 319 (321)
T PTZ00325 244 VLKALRGDKGIVECAFVESDMRPECPFFSSPVELGKEGVERVLPIG-PLNAYEEELLEAAVPDLKKNIEKGLEFARK 319 (321)
T ss_pred HHhhcCCCCCeEEEEEEecCCCCCCeEEEEEEEEcCCeeEEEcCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 998744445678888889988 6899999999999999999998 6 999999999999999999999999999875
No 5
>PLN00106 malate dehydrogenase
Probab=100.00 E-value=4.8e-64 Score=474.03 Aligned_cols=300 Identities=77% Similarity=1.164 Sum_probs=271.8
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPR 108 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~~~ 108 (340)
.||+||||+|+||+++++.|+.+++++||+|+|+++++++++||.|+.....+..+++++|++++++|||+||++||.|+
T Consensus 19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~~~ 98 (323)
T PLN00106 19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGVPR 98 (323)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCCCC
Confidence 49999998899999999999999999999999999888999999999865566654456778899999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCC----ccHHHHHHHHHHhCCCCCCceEeccchhHHHHHHH
Q 019519 109 KPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVN----STVPIAAEVFKKAGTYNEKKLFGVTTLDVVRAKTF 184 (340)
Q Consensus 109 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d----~~t~~~~~~~~~sg~~~~~kviG~~~ld~~R~~~~ 184 (340)
++|++|.+++..|.++++++++.+++++|+++++++|||+| ++++.+ ++.+| +||+|+||+|.||++||+++
T Consensus 99 ~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~---~~~s~-~p~~~viG~~~LDs~Rl~~~ 174 (323)
T PLN00106 99 KPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVL---KKAGV-YDPKKLFGVTTLDVVRANTF 174 (323)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHH---HHcCC-CCcceEEEEecchHHHHHHH
Confidence 99999999999999999999999999999999999999999 677654 67787 99999999988999999999
Q ss_pred HHHHcCCCCCCCceeEEEecCCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhcCCCCccchHHHHHHHHHH
Q 019519 185 YAGKANVNVAEVNVPVVGGHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFAD 264 (340)
Q Consensus 185 la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~l~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~li~ 264 (340)
+|+++|+++.+|+++|+||||++++||+||++.+...+++++++++.+++++++++|++.+.|||+++||+|.+++++++
T Consensus 175 lA~~lgv~~~~V~~~ViGeHg~~s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~~kg~t~~~~a~a~~~ii~ 254 (323)
T PLN00106 175 VAEKKGLDPADVDVPVVGGHAGITILPLLSQATPKVSFTDEEIEALTKRIQNGGTEVVEAKAGAGSATLSMAYAAARFAD 254 (323)
T ss_pred HHHHhCCChhheEEEEEEeCCCccEeeehhcceecccCCHHHHHHHHHHHHHHHHHHHhCccCCCCchHHHHHHHHHHHH
Confidence 99999999999999999999766999999999765446666789999999999999999754689999999999999999
Q ss_pred HHHcCCCCCCcEEEeeeeeCCCCCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 019519 265 ACLKGLNGVPDVVECSFVQSTVTELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEKLKPELKASIE 332 (340)
Q Consensus 265 ai~~~~~~~~~v~~~~~~~g~~~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~~ 332 (340)
+|+.++++++.++||++++++|.+++|||+||+||++|+++++++++|+++|+++|++|++.|++.++
T Consensus 255 ail~~~~~~~~v~~~s~~~~~~~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~S~~~i~~~~~ 322 (323)
T PLN00106 255 ACLRGLNGEADVVECSYVQSEVTELPFFASKVRLGRNGVEEVLGLGPLSEYEQKGLEALKPELKASIE 322 (323)
T ss_pred HHHhccCCCceEEEEEEECcccCCceEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHHHHHHHhh
Confidence 99998765667899988777664349999999999999999998768999999999999999998875
No 6
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=2.6e-64 Score=474.18 Aligned_cols=286 Identities=26% Similarity=0.383 Sum_probs=260.2
Q ss_pred eEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCC-C--ceEEEEecCCccccccCCCCEEEEcC
Q 019519 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINT-R--SEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 30 KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~-~--~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
||+|||+ |+||+++|+.|+..++++||+|+|+++ ++|+++||+|... . ..+..++ +| +++++|||+||+||
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~--~~-y~~~~~aDivvita 76 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA--GD-YDDCADADIIVITA 76 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE--CC-HHHhCCCCEEEECC
Confidence 8999998 999999999999999999999999987 7899999999753 2 2455543 45 58899999999999
Q ss_pred CCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec-cchhHHHH
Q 019519 105 GVPRKPGMT--RDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDVVRA 181 (340)
Q Consensus 105 g~~~~~g~~--r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~-~~ld~~R~ 181 (340)
|.|+++|++ |+|++..|++|++++++.+.+++|++++|++|||+|+||+++ ++.+| ||++|+||+ |.||++||
T Consensus 77 G~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsNPvDv~t~~~---~k~sg-~p~~rviG~gt~LDs~R~ 152 (307)
T cd05290 77 GPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITNPLDIAVYIA---ATEFD-YPANKVIGTGTMLDTARL 152 (307)
T ss_pred CCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCcHHHHHHHH---HHHhC-cChhheecccchHHHHHH
Confidence 999999999 699999999999999999999999999999999999999998 78999 999999999 89999999
Q ss_pred HHHHHHHcCCCCCCCceeEEEecCCCccccccccCCCCC-C---C------ChHHHHHHHHHHhcchhhhhhhhcCCCCc
Q 019519 182 KTFYAGKANVNVAEVNVPVVGGHAGITILPLFSQATPKA-N---L------ADEDIKALTKRTQDGGTEVVEAKAGKGSA 251 (340)
Q Consensus 182 ~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~---~------~~~~~~~l~~~v~~~~~~i~~~~~~kg~~ 251 (340)
++++|+++|+++++|+++||||||+ +++|+||++++++ + + ++.+++++.+++++++++|++ +||+|
T Consensus 153 ~~~la~~l~v~~~~V~~~ViGeHGd-s~vp~wS~~~v~g~~l~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~---~KG~t 228 (307)
T cd05290 153 RRIVADKYGVDPKNVTGYVLGEHGS-HAFPVWSLVNIAGLPLDELEALFGKEPIDKDELLEEVVQAAYDVFN---RKGWT 228 (307)
T ss_pred HHHHHHHhCCCcccEEEEEEecCCC-ceEEeeeeeEECCEEHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHH---ccCee
Confidence 9999999999999999999999998 9999999999864 1 1 122478999999999999999 57899
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEee-eeeCCC-CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHHHHHHHHH
Q 019519 252 TLSMAYAGAIFADACLKGLNGVPDVVECS-FVQSTV-TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEKLKPELKA 329 (340)
Q Consensus 252 ~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~ 329 (340)
+|++|.++++++++|++|.+ .++|++ +++|+| ++|+|+|+||++|++|+++++++ +|+++|+++|++|++.|++
T Consensus 229 ~~~ia~a~~~ii~ail~d~~---~v~~vsv~~~G~yg~~~v~~svP~~ig~~Gv~~i~~l-~L~~~E~~~l~~s~~~i~~ 304 (307)
T cd05290 229 NAGIAKSASRLIKAILLDER---SILPVCTLLSGEYGLSDVALSLPTVIGAKGIERVLEI-PLDEWELEKLHKSAKAIRE 304 (307)
T ss_pred hHHHHHHHHHHHHHHHhCCC---eEEEEEEeeCCccCCCCEEEEEEEEEeCCCceEecCC-CCCHHHHHHHHHHHHHHHH
Confidence 99999999999999998853 578886 578888 78999999999999999999998 9999999999999999997
Q ss_pred HH
Q 019519 330 SI 331 (340)
Q Consensus 330 ~~ 331 (340)
.+
T Consensus 305 ~~ 306 (307)
T cd05290 305 TI 306 (307)
T ss_pred Hh
Confidence 65
No 7
>KOG1495 consensus Lactate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=2.9e-63 Score=441.32 Aligned_cols=290 Identities=26% Similarity=0.415 Sum_probs=266.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCC---CceEEEEecCCccccccCCCCEEEE
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINT---RSEVAGYMGNDQLGQALEDSDVVII 102 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~---~~~v~~~~~~~d~~~al~~aDiVi~ 102 (340)
..||+|+|+ |+||.++++.++.+++.+|++|+|.++ ++|++|||+|... .+++... .|+ .+.+|+|+||+
T Consensus 20 ~~KItVVG~-G~VGmAca~siL~k~Ladel~lvDv~~dklkGE~MDLqH~s~f~~~~~V~~~---~Dy-~~sa~S~lvIi 94 (332)
T KOG1495|consen 20 HNKITVVGV-GQVGMACAISILLKGLADELVLVDVNEDKLKGEMMDLQHGSAFLSTPNVVAS---KDY-SVSANSKLVII 94 (332)
T ss_pred CceEEEEcc-chHHHHHHHHHHHhhhhhceEEEecCcchhhhhhhhhccccccccCCceEec---Ccc-cccCCCcEEEE
Confidence 469999998 999999999999999999999999998 7999999999863 4666653 574 77899999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec-cchhHHHH
Q 019519 103 PAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDVVRA 181 (340)
Q Consensus 103 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~-~~ld~~R~ 181 (340)
|||..+++|++|++++++|+.|++.+.+++.+|.||++++++|||+|+|||++ ||.+| ||++||||. |+||++||
T Consensus 95 TAGarq~~gesRL~lvQrNV~ifK~iip~lv~ySpd~~llvvSNPVDilTYv~---wKLSg-fP~nRViGsGcnLDsaRF 170 (332)
T KOG1495|consen 95 TAGARQSEGESRLDLVQRNVDIFKAIIPALVKYSPDCILLVVSNPVDILTYVT---WKLSG-FPKNRVIGSGCNLDSARF 170 (332)
T ss_pred ecCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecCchHHHHHHH---HHHcC-CcccceeccCcCccHHHH
Confidence 99999999999999999999999999999999999999999999999999997 89999 999999999 99999999
Q ss_pred HHHHHHHcCCCCCCCceeEEEecCCCccccccccCCCCC------------CCChHHHHHHHHHHhcchhhhhhhhcCCC
Q 019519 182 KTFYAGKANVNVAEVNVPVVGGHAGITILPLFSQATPKA------------NLADEDIKALTKRTQDGGTEVVEAKAGKG 249 (340)
Q Consensus 182 ~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~------------~~~~~~~~~l~~~v~~~~~~i~~~~~~kg 249 (340)
|+.++++||++|+++++|++||||+ +.||.||..++.+ ..+++.|+++.++|.+.+++|+++ ||
T Consensus 171 ryLi~~~Lg~~pss~hgwIiGEHGd-SsV~vWSgvniAGv~l~~l~~~~~t~~d~e~w~eihK~v~~sayevikl---KG 246 (332)
T KOG1495|consen 171 RYLIGNRLGVHPSSCHGWIIGEHGD-SSVPVWSGVNIAGVSLKDLNPDLGTDYDPENWKEIHKQVVDSAYEVIKL---KG 246 (332)
T ss_pred HHHHHHHhCCCcccceEEEeeccCC-ccceecccccccceEHhHhChhhcCCCCHHHHHHHHHHHHHHHHHHHHh---cC
Confidence 9999999999999999999999999 8999999998853 256778999999999999999996 59
Q ss_pred CccchHHHHHHHHHHHHHcCCCCCCcEEEeee-eeCCC--CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHHHHHH
Q 019519 250 SATLSMAYAGAIFADACLKGLNGVPDVVECSF-VQSTV--TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEKLKPE 326 (340)
Q Consensus 250 ~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~~-~~g~~--~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~ 326 (340)
+|.|++|.++++++++|+.|.+ .++|++. ++|.| .+|+|+|+||++|++|+..++.. +|+++|.++|.+|++.
T Consensus 247 yTswaIglsva~l~~ail~n~~---~i~~Vst~~kg~~gI~~dVflSlPc~l~~~Gi~~vv~~-~Lt~~E~akL~kSa~t 322 (332)
T KOG1495|consen 247 YTSWAIGLSVADLAQAILRNLR---RIHPVSTMVKGLYGIDDDVFLSLPCLLGANGITHVVKQ-KLTDEEVAKLKKSAKT 322 (332)
T ss_pred chHHHHHHHHHHHHHHHHhCcC---ceeeeeeccccccCCCCceEEecceeecCCchhhhhcc-cCCHHHHHHHHHHHHH
Confidence 9999999999999999999976 4778874 78887 67999999999999999999998 9999999999999999
Q ss_pred HHHHHHHHh
Q 019519 327 LKASIEKGV 335 (340)
Q Consensus 327 l~~~~~~~~ 335 (340)
|. ++|+.+
T Consensus 323 l~-~~q~~l 330 (332)
T KOG1495|consen 323 LL-EAQKSL 330 (332)
T ss_pred HH-HHHHhc
Confidence 95 555544
No 8
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=8.2e-63 Score=465.30 Aligned_cols=288 Identities=28% Similarity=0.421 Sum_probs=261.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCC-C--ceEEEEecCCccccccCCCCEEEE
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINT-R--SEVAGYMGNDQLGQALEDSDVVII 102 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~-~--~~v~~~~~~~d~~~al~~aDiVi~ 102 (340)
.+||+|||| |+||+++++.|+..++++||+|+|+++ ++|+++||+|+.. . ..+.. ++|+ ++++|||+||+
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~---~~dy-~~~~~adivvi 77 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEA---DKDY-SVTANSKVVIV 77 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEE---CCCH-HHhCCCCEEEE
Confidence 469999997 999999999999999999999999987 6899999999972 2 23432 3565 67999999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec-cchhHHHH
Q 019519 103 PAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDVVRA 181 (340)
Q Consensus 103 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~-~~ld~~R~ 181 (340)
++|.|+++||+|.|++.+|+++++++++.|++++|++++|++|||+|++|+++ ++++| +|++||||+ |.||++|+
T Consensus 78 taG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d~~t~~~---~k~sg-~p~~~viG~gt~Ld~~R~ 153 (312)
T cd05293 78 TAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSNPVDIMTYVA---WKLSG-LPKHRVIGSGCNLDSARF 153 (312)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccChHHHHHHHH---HHHhC-CCHHHEEecCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999997 78888 999999999 99999999
Q ss_pred HHHHHHHcCCCCCCCceeEEEecCCCccccccccCCCCC-C-----------CChHHHHHHHHHHhcchhhhhhhhcCCC
Q 019519 182 KTFYAGKANVNVAEVNVPVVGGHAGITILPLFSQATPKA-N-----------LADEDIKALTKRTQDGGTEVVEAKAGKG 249 (340)
Q Consensus 182 ~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~-----------~~~~~~~~l~~~v~~~~~~i~~~~~~kg 249 (340)
++++|+++++++++|++++|||||+ +++|+||++++++ + .++++++++.+++++++++|++ +||
T Consensus 154 ~~~la~~l~v~~~~v~~~v~GeHG~-s~vp~~S~~~i~g~~l~~~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~---~kg 229 (312)
T cd05293 154 RYLIAERLGVAPSSVHGWIIGEHGD-SSVPVWSGVNVAGVRLQDLNPDIGTDKDPEKWKEVHKQVVDSAYEVIK---LKG 229 (312)
T ss_pred HHHHHHHhCCChhhEEEEEeecCCC-CccccceeceECCEEHHHHhhhccccccHHHHHHHHHHHHHHHHHHHH---hcC
Confidence 9999999999999999999999998 8999999999864 1 1234578999999999999998 578
Q ss_pred CccchHHHHHHHHHHHHHcCCCCCCcEEEee-eeeCCC--CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHHHHHH
Q 019519 250 SATLSMAYAGAIFADACLKGLNGVPDVVECS-FVQSTV--TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEKLKPE 326 (340)
Q Consensus 250 ~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~ 326 (340)
+|+|++|.++++++++|+.+.+ .++|++ +++|.| |+|++||+||++|++|+++++++ +|+++|+++|++|++.
T Consensus 230 ~t~~~~a~a~~~ii~ail~d~~---~~~~vsv~~~g~yg~~~d~~~svP~~ig~~Gi~~i~~l-~L~~~E~~~l~~s~~~ 305 (312)
T cd05293 230 YTSWAIGLSVADLVDAILRNTG---RVHSVSTLVKGLHGIEDEVFLSLPCILGENGITHVIKQ-PLTEEEQEKLQKSADT 305 (312)
T ss_pred CchHHHHHHHHHHHHHHHcCCC---eEEEEEEEeCCccCCCCCeEEEEeEEEeCCceEEEecC-CCCHHHHHHHHHHHHH
Confidence 9999999999999999998864 477776 578877 68999999999999999999998 9999999999999999
Q ss_pred HHHHHH
Q 019519 327 LKASIE 332 (340)
Q Consensus 327 l~~~~~ 332 (340)
|++.++
T Consensus 306 i~~~~~ 311 (312)
T cd05293 306 LWEVQK 311 (312)
T ss_pred HHHHhh
Confidence 998764
No 9
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=100.00 E-value=5.7e-63 Score=467.48 Aligned_cols=296 Identities=31% Similarity=0.407 Sum_probs=263.6
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcc-----eEEEEeCCC----cHHHHHHHhcCCC--CceEEEEecCCcccccc
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVS-----RLALYDIAN----TPGVAADVGHINT--RSEVAGYMGNDQLGQAL 94 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~-----el~L~D~~~----~~~~~~dl~~~~~--~~~v~~~~~~~d~~~al 94 (340)
++|.||+||||+|+||+++++.|+..++++ ||+|+|+++ ++|+++||+|+.. ...+... .+| ++++
T Consensus 1 ~~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~-~~~~ 77 (323)
T TIGR01759 1 KKPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT--TDP-EEAF 77 (323)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe--cCh-HHHh
Confidence 367899999987999999999999999999 999999964 6999999999973 1223332 234 6889
Q ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEecCCCCccHHHHHHHHHHh-CCCCCCceEe
Q 019519 95 EDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCP-NAIVNMISNPVNSTVPIAAEVFKKA-GTYNEKKLFG 172 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNP~d~~t~~~~~~~~~s-g~~~~~kviG 172 (340)
+|||+||+|||.|+++||+|.|++..|++++++++++|.+++| ++++|++|||+|+||+++ ++.+ | ||++||||
T Consensus 78 ~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~---~k~s~g-~p~~rViG 153 (323)
T TIGR01759 78 KDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNALIA---SKNAPD-IPPKNFSA 153 (323)
T ss_pred CCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHH---HHHcCC-CCHHHEEE
Confidence 9999999999999999999999999999999999999999998 999999999999999998 7889 8 99999999
Q ss_pred ccchhHHHHHHHHHHHcCCCCCCCc-eeEEEecCCCccccccccCCCCC-C----CChHH--HHHHHHHHhcchhhhhhh
Q 019519 173 VTTLDVVRAKTFYAGKANVNVAEVN-VPVVGGHAGITILPLFSQATPKA-N----LADED--IKALTKRTQDGGTEVVEA 244 (340)
Q Consensus 173 ~~~ld~~R~~~~la~~l~v~~~~v~-~~v~G~hg~~~~vp~~s~~~v~~-~----~~~~~--~~~l~~~v~~~~~~i~~~ 244 (340)
+|.||++||++++|+++|+++++|+ .+||||||+ +++|+||++++++ + ++++. +++|.+++++++++|++
T Consensus 154 ~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~- 231 (323)
T TIGR01759 154 MTRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHSN-TQVPDFTHATVDGRPVKEVIKDDKWLEGEFIPTVQQRGAAVIE- 231 (323)
T ss_pred eeHHHHHHHHHHHHHHhCcChHHeEEeEEEecCCC-ceeeccccCEECCccHHHHhcchhhHHHHHHHHHHhhHHHHHh-
Confidence 9999999999999999999999995 569999998 9999999999864 2 23332 68999999999999999
Q ss_pred hcCCCCccc-hHHHHHHHHHHHHHcCCCCCCcEEEee-eeeC-CC--CCccEEEEeEEEcCCceEEEec-CCCCCHHHHH
Q 019519 245 KAGKGSATL-SMAYAGAIFADACLKGLNGVPDVVECS-FVQS-TV--TELPFFASKVRLGKNGVEEVLG-LGPLSDFEQE 318 (340)
Q Consensus 245 ~~~kg~~~~-s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g-~~--~~~~~~svP~~ig~~Gv~~i~~-~~~L~~~E~~ 318 (340)
+||+++| ++|.++++++++|++|++. +.++|++ +++| +| |+|+|||+||++|++|++++++ + +|+++|++
T Consensus 232 --~kG~t~~~~~a~a~~~iv~ail~~~~~-~~v~~~s~~~~g~~Yg~~~~v~~s~P~~lg~~Gv~~iv~~l-~L~~~E~~ 307 (323)
T TIGR01759 232 --ARGASSAASAANAAIDHVRDWVTGTPE-GDWVSMGVYSDGNPYGIPEGIIFSFPVTCKGDGEWEIVEGL-PLDDFVRG 307 (323)
T ss_pred --ccCCcchHHHHHHHHHHHHHHHcCCCC-CcEEEEEEEeCCcccCCCCCeEEEEEEEEcCCeeEEEcCCC-CCCHHHHH
Confidence 4688999 5779999999999999732 2488997 6899 88 5899999999999999999999 7 99999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 019519 319 GLEKLKPELKASIEKG 334 (340)
Q Consensus 319 ~l~~s~~~l~~~~~~~ 334 (340)
+|++|++.|++++++|
T Consensus 308 ~l~~sa~~lk~~~~~~ 323 (323)
T TIGR01759 308 KLDATEDELLEEKEEA 323 (323)
T ss_pred HHHHHHHHHHHHHhcC
Confidence 9999999999999764
No 10
>PRK05086 malate dehydrogenase; Provisional
Probab=100.00 E-value=7.8e-62 Score=459.16 Aligned_cols=309 Identities=56% Similarity=0.841 Sum_probs=273.7
Q ss_pred CeEEEEcCCCChHHHHHHHHHh-CCCcceEEEEeCCC-cHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKL-NPLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~-~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~ 106 (340)
|||+||||+|.||+++++.+.. .+...+++|+|+++ ..++++|+.|......+..+ ..+|++++++|+|+||+++|.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~-~~~d~~~~l~~~DiVIitaG~ 79 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF-SGEDPTPALEGADVVLISAGV 79 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEe-CCCCHHHHcCCCCEEEEcCCC
Confidence 6999999989999999998865 56678999999877 56788999986422344432 235667899999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHH-HHhCCCCCCceEeccchhHHHHHHHH
Q 019519 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVF-KKAGTYNEKKLFGVTTLDVVRAKTFY 185 (340)
Q Consensus 107 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~-~~sg~~~~~kviG~~~ld~~R~~~~l 185 (340)
+++++++|.+++..|+++++++++.|++++|+++++++|||+|+||+++++.. +.+| +|++||||+|.||++|+++++
T Consensus 80 ~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP~D~~t~~~~~~~~~~sg-~p~~rvig~~~Lds~R~~~~i 158 (312)
T PRK05086 80 ARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGV-YDKNKLFGVTTLDVIRSETFV 158 (312)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchHHHHHHHHHHHHHhcC-CCHHHEEeeecHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999975433 6777 999999999889999999999
Q ss_pred HHHcCCCCCCCceeEEEecCCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhcCCCCccchHHHHHHHHHHH
Q 019519 186 AGKANVNVAEVNVPVVGGHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADA 265 (340)
Q Consensus 186 a~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~l~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~li~a 265 (340)
|+++|+++++|++++|||||++++||+||++ -+.++++++++++.+++++++++|++.|.|+|+|+||+|.++++++++
T Consensus 159 a~~l~~~~~~v~~~v~GeHg~~s~~p~~S~~-~g~~l~~~~~~~i~~~v~~~g~~ii~~k~~~g~t~~~~a~a~~~~v~a 237 (312)
T PRK05086 159 AELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLS 237 (312)
T ss_pred HHHhCCChhheEEEEEEecCCCceecccccc-CCccCCHHHHHHHHHHHHHHHHHHHhcccCCCCchhhHHHHHHHHHHH
Confidence 9999999999999999999776899999999 334677777999999999999999997656799999999999999999
Q ss_pred HHcCCCCCCcEEEeeeeeCCCCCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhC
Q 019519 266 CLKGLNGVPDVVECSFVQSTVTELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEKLKPELKASIEKGVKFANA 340 (340)
Q Consensus 266 i~~~~~~~~~v~~~~~~~g~~~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~~ 340 (340)
|+.++++++.++|+++++|+-.+++|||+||++|++|+++++++++|+++|+++|++|++.|++.++++++|+++
T Consensus 238 i~~~~~~~~~v~~~~~~~~~g~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~~~~g~~~~~~ 312 (312)
T PRK05086 238 LVRALQGEQGVVECAYVEGDGKYARFFAQPVLLGKNGVEERLPIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK 312 (312)
T ss_pred HHhcCCCCCcEEEEEEEeccCCcceEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 998865556688887766643468999999999999999999977999999999999999999999999999875
No 11
>PLN02602 lactate dehydrogenase
Probab=100.00 E-value=4.7e-62 Score=465.16 Aligned_cols=291 Identities=26% Similarity=0.406 Sum_probs=262.9
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCC-CceEEEEecCCccccccCCCCEEEEcCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINT-RSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~-~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
+||+|||+ |+||+++++.|+..++++||+|+|+++ ++|+++||+|+.. ....... .++|+ ++++|||+||++||
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~-~~~dy-~~~~daDiVVitAG 114 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKIL-ASTDY-AVTAGSDLCIVTAG 114 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEE-eCCCH-HHhCCCCEEEECCC
Confidence 69999997 999999999999999999999999987 6899999999863 2223332 22464 67999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec-cchhHHHHHHH
Q 019519 106 VPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDVVRAKTF 184 (340)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~-~~ld~~R~~~~ 184 (340)
.|+++|++|.|++.+|+++++++++.|+++||++|+|++|||+|++|+++ ++.+| +|++||||+ |.||++|++++
T Consensus 115 ~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvtNPvdv~t~~~---~k~sg-~p~~rviG~gt~LDs~R~r~~ 190 (350)
T PLN02602 115 ARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVSNPVDVLTYVA---WKLSG-FPANRVIGSGTNLDSSRFRFL 190 (350)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHH---HHHhC-CCHHHEEeecchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997 78899 999999999 69999999999
Q ss_pred HHHHcCCCCCCCceeEEEecCCCccccccccCCCCC-C-----------CChHHHHHHHHHHhcchhhhhhhhcCCCCcc
Q 019519 185 YAGKANVNVAEVNVPVVGGHAGITILPLFSQATPKA-N-----------LADEDIKALTKRTQDGGTEVVEAKAGKGSAT 252 (340)
Q Consensus 185 la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~-----------~~~~~~~~l~~~v~~~~~~i~~~~~~kg~~~ 252 (340)
+|+++|+++++|+++||||||+ +++|+||.+++++ + +++++++++.+++++++++|++ +||+|+
T Consensus 191 lA~~l~v~~~~V~~~ViGeHGd-s~vp~wS~~~i~G~pl~~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~---~KG~t~ 266 (350)
T PLN02602 191 IADHLDVNAQDVQAYIVGEHGD-SSVALWSSVSVGGVPVLSFLEKQQIAYEKETLEEIHRAVVDSAYEVIK---LKGYTS 266 (350)
T ss_pred HHHHhCCCccceeeeEEecCCC-ceEeeeeeeeECCEEHHHHhhccCCccCHHHHHHHHHHHHHHHHHHHh---cCCccH
Confidence 9999999999999999999998 9999999998853 1 3345588999999999999999 578999
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEeee-eeCCC-C--CccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHHHHHHHH
Q 019519 253 LSMAYAGAIFADACLKGLNGVPDVVECSF-VQSTV-T--ELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEKLKPELK 328 (340)
Q Consensus 253 ~s~A~a~~~li~ai~~~~~~~~~v~~~~~-~~g~~-~--~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~ 328 (340)
|++|.++++++++|++|.+ .++|++. ++|+| . +++|+|+||++|++|+++++++ +|+++|+++|++|++.|+
T Consensus 267 ~gia~a~a~ii~ail~d~~---~v~~vsv~~~g~Yg~~~~~v~~s~P~~ig~~Gi~~i~~l-~L~~~E~~~l~~sa~~l~ 342 (350)
T PLN02602 267 WAIGYSVASLVRSLLRDQR---RIHPVSVLAKGFHGIDEGDVFLSLPAQLGRNGVLGVVNV-HLTDEEAERLRKSAKTLW 342 (350)
T ss_pred HHHHHHHHHHHHHHHhcCC---CeEEEEEecccccCCCCCCcEEEEEEEEeCCeeEEEecC-CCCHHHHHHHHHHHHHHH
Confidence 9999999999999999874 5888875 68888 3 7999999999999999999998 999999999999999999
Q ss_pred HHHHHH
Q 019519 329 ASIEKG 334 (340)
Q Consensus 329 ~~~~~~ 334 (340)
+.++..
T Consensus 343 ~~~~~~ 348 (350)
T PLN02602 343 EVQSQL 348 (350)
T ss_pred HHHHHh
Confidence 887654
No 12
>PRK05442 malate dehydrogenase; Provisional
Probab=100.00 E-value=1.6e-61 Score=458.17 Aligned_cols=298 Identities=27% Similarity=0.362 Sum_probs=263.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcc-----eEEEEeCCC----cHHHHHHHhcCCC--CceEEEEecCCccccccC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVS-----RLALYDIAN----TPGVAADVGHINT--RSEVAGYMGNDQLGQALE 95 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~-----el~L~D~~~----~~~~~~dl~~~~~--~~~v~~~~~~~d~~~al~ 95 (340)
.|+||+||||+|+||+++++.|+..++++ ||+|+|+++ ++|+++||+|+.. ...+..+ +++ +++++
T Consensus 3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~-y~~~~ 79 (326)
T PRK05442 3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT--DDP-NVAFK 79 (326)
T ss_pred CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe--cCh-HHHhC
Confidence 46899999987999999999999999888 999999954 6899999999862 2234443 234 68899
Q ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEecc
Q 019519 96 DSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGVT 174 (340)
Q Consensus 96 ~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~~ 174 (340)
|||+||++||.|+++|++|.|++..|++++++++++|.+++ |++++|++|||+|+||+++ ++.+|+||++||||+|
T Consensus 80 daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~---~k~s~g~p~~rViG~t 156 (326)
T PRK05442 80 DADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALIA---MKNAPDLPAENFTAMT 156 (326)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHHH---HHHcCCCCHHHEEeee
Confidence 99999999999999999999999999999999999999988 7999999999999999998 7899349999999999
Q ss_pred chhHHHHHHHHHHHcCCCCCCCceeE-EEecCCCccccccccCCCCC-C----CChHH--HHHHHHHHhcchhhhhhhhc
Q 019519 175 TLDVVRAKTFYAGKANVNVAEVNVPV-VGGHAGITILPLFSQATPKA-N----LADED--IKALTKRTQDGGTEVVEAKA 246 (340)
Q Consensus 175 ~ld~~R~~~~la~~l~v~~~~v~~~v-~G~hg~~~~vp~~s~~~v~~-~----~~~~~--~~~l~~~v~~~~~~i~~~~~ 246 (340)
.||++||++++|+++++++++|++++ |||||+ +++|+||++++++ + +++++ ++++.+++++++++|++
T Consensus 157 ~LDs~R~r~~la~~l~v~~~~V~~~vV~GeHG~-s~~~~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~--- 232 (326)
T PRK05442 157 RLDHNRALSQLAAKAGVPVADIKKMTVWGNHSA-TQYPDFRHATIDGKPAAEVINDQAWLEDTFIPTVQKRGAAIIE--- 232 (326)
T ss_pred HHHHHHHHHHHHHHhCcChHHeEEeEEEECCcC-ceeeccccCEECCEEHHHHccchhhHHHHHHHHHHhhHHHHHh---
Confidence 99999999999999999999999965 899998 9999999999975 1 33332 67899999999999999
Q ss_pred CCCCccchHHHH-HHHHHHHHHcCCCCCCcEEEeee-eeCCC--CCccEEEEeEEEcCCceEEEec-CCCCCHHHHHHHH
Q 019519 247 GKGSATLSMAYA-GAIFADACLKGLNGVPDVVECSF-VQSTV--TELPFFASKVRLGKNGVEEVLG-LGPLSDFEQEGLE 321 (340)
Q Consensus 247 ~kg~~~~s~A~a-~~~li~ai~~~~~~~~~v~~~~~-~~g~~--~~~~~~svP~~ig~~Gv~~i~~-~~~L~~~E~~~l~ 321 (340)
+||+++|++|.+ +++++++|+++.+. +.++|+++ ++|+| |+++|||+||++| +|+++++. + +|+++|+++|+
T Consensus 233 ~kG~t~~~~a~~~~~~iv~ail~~~~~-~~i~~~sv~~~g~ygi~~~v~~s~P~~ig-~Gv~~iv~~l-~L~~~E~~~l~ 309 (326)
T PRK05442 233 ARGASSAASAANAAIDHVRDWVLGTPE-GDWVSMGVPSDGSYGIPEGLIFGFPVTCE-NGEYEIVQGL-EIDDFSREKID 309 (326)
T ss_pred CcCCccHHHHHHHHHHHHHHHHhCCCC-CeEEEEEEEecCccCCcCCeEEEEEEEEc-CcEEEEeCCC-CCCHHHHHHHH
Confidence 578999999999 59999999998521 35888875 68888 5899999999999 99999866 6 99999999999
Q ss_pred HHHHHHHHHHHHHhhh
Q 019519 322 KLKPELKASIEKGVKF 337 (340)
Q Consensus 322 ~s~~~l~~~~~~~~~~ 337 (340)
+|++.|+++.+.++..
T Consensus 310 ~s~~~l~~~~~~~~~~ 325 (326)
T PRK05442 310 ATLAELEEERDAVKHL 325 (326)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999887654
No 13
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=100.00 E-value=4.4e-61 Score=454.64 Aligned_cols=292 Identities=27% Similarity=0.438 Sum_probs=264.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCC-CceEEEEecCCccccccCCCCEEEEc
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINT-RSEVAGYMGNDQLGQALEDSDVVIIP 103 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~-~~~v~~~~~~~d~~~al~~aDiVi~~ 103 (340)
+.+||+|||| |.||+++++.|+..++++||+|+|+++ ++++++||.|+.. ..++...+ +| +++++|||+||++
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~--~~-~~~~~~adivIit 80 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA--GD-YSDCKDADLVVIT 80 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe--CC-HHHhCCCCEEEEe
Confidence 4579999998 999999999999999999999999987 6899999999863 23444442 45 5789999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec-cchhHHHHH
Q 019519 104 AGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDVVRAK 182 (340)
Q Consensus 104 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~-~~ld~~R~~ 182 (340)
+|.|+++|++|.|++..|+++++++++.+++++|++|+|++|||+|++|+++ ++++| +|++||||+ |.||+.|++
T Consensus 81 ag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvsNP~d~~~~~~---~k~sg-~p~~~viG~gt~LDs~R~~ 156 (315)
T PRK00066 81 AGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASNPVDILTYAT---WKLSG-FPKERVIGSGTSLDSARFR 156 (315)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCcHHHHHHHH---HHHhC-CCHHHEeecCchHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999987 78888 999999999 799999999
Q ss_pred HHHHHHcCCCCCCCceeEEEecCCCccccccccCCCCC-C----------CChHHHHHHHHHHhcchhhhhhhhcCCCCc
Q 019519 183 TFYAGKANVNVAEVNVPVVGGHAGITILPLFSQATPKA-N----------LADEDIKALTKRTQDGGTEVVEAKAGKGSA 251 (340)
Q Consensus 183 ~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~----------~~~~~~~~l~~~v~~~~~~i~~~~~~kg~~ 251 (340)
+++|+++|+++++|+++|||+||+ +++|+||++++++ + +++++++++.+++++++++|++ +||++
T Consensus 157 ~~la~~l~v~~~~V~~~viGeHG~-s~v~~~S~~~v~g~~l~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~---~kg~t 232 (315)
T PRK00066 157 YMLSEKLDVDPRSVHAYIIGEHGD-TEFPVWSHANVAGVPLEEYLEENEQYDEEDLDEIFENVRDAAYEIIE---KKGAT 232 (315)
T ss_pred HHHHHHhCCCcccEEEEEEecCCC-cceecceeceECCEEHHHHhhhccCcCHHHHHHHHHHHHHHHHHHHh---cCCee
Confidence 999999999999999999999998 8999999999864 1 3445688899999999999999 56899
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEee-eeeCCC-CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHHHHHHHHH
Q 019519 252 TLSMAYAGAIFADACLKGLNGVPDVVECS-FVQSTV-TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEKLKPELKA 329 (340)
Q Consensus 252 ~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~ 329 (340)
+|++|.++++++++|+++.+ .++|++ +++|+| ++++|||+||++|++|+++++++ +|+++|+++|++|+++|++
T Consensus 233 ~~~~a~~~~~i~~ail~~~~---~v~~~sv~~~g~yg~~~v~~S~Pv~ig~~Gv~~i~~l-~L~~~E~~~L~~s~~~l~~ 308 (315)
T PRK00066 233 YYGIAMALARITKAILNNEN---AVLPVSAYLEGQYGEEDVYIGVPAVVNRNGIREIVEL-PLNDDEKQKFAHSADVLKE 308 (315)
T ss_pred hHHHHHHHHHHHHHHHcCCC---eEEEEEEEeccccCCCCEEEEeEEEEeCCcEEEEcCC-CCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999753 578887 478888 78999999999999999999998 9999999999999999999
Q ss_pred HHHHH
Q 019519 330 SIEKG 334 (340)
Q Consensus 330 ~~~~~ 334 (340)
.++..
T Consensus 309 ~~~~~ 313 (315)
T PRK00066 309 IMDEA 313 (315)
T ss_pred HHHHh
Confidence 88754
No 14
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=100.00 E-value=1.5e-61 Score=454.50 Aligned_cols=281 Identities=29% Similarity=0.467 Sum_probs=254.9
Q ss_pred EEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCC--CceEEEEecCCccccccCCCCEEEEcCCCCC
Q 019519 33 VLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINT--RSEVAGYMGNDQLGQALEDSDVVIIPAGVPR 108 (340)
Q Consensus 33 IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~--~~~v~~~~~~~d~~~al~~aDiVi~~ag~~~ 108 (340)
|||+ |+||+++++.|+..++++||+|+|+++ ++++++||+|+.. ...+.... +| +++++|||+||+++|.||
T Consensus 1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~--~~-~~~~~daDivVitag~~r 76 (299)
T TIGR01771 1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRS--GD-YSDCKDADLVVITAGAPQ 76 (299)
T ss_pred CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEec--CC-HHHHCCCCEEEECCCCCC
Confidence 6897 999999999999999999999999987 7999999999863 22344432 45 588999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec-cchhHHHHHHHHHH
Q 019519 109 KPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDVVRAKTFYAG 187 (340)
Q Consensus 109 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~-~~ld~~R~~~~la~ 187 (340)
++||+|.|++..|+++++++++.|++++|++++|++|||+|++|+++ ++++| +|++||||+ |.||++|+++++|+
T Consensus 77 k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d~~t~~~---~~~sg-~p~~~viG~gt~LDs~R~~~~la~ 152 (299)
T TIGR01771 77 KPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATNPVDILTYVA---WKLSG-FPKNRVIGSGTVLDTARLRYLLAE 152 (299)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH---HHHhC-CCHHHEEeccchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999997 78888 999999999 79999999999999
Q ss_pred HcCCCCCCCceeEEEecCCCccccccccCCCCC-C---C-------ChHHHHHHHHHHhcchhhhhhhhcCCCCccchHH
Q 019519 188 KANVNVAEVNVPVVGGHAGITILPLFSQATPKA-N---L-------ADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMA 256 (340)
Q Consensus 188 ~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~---~-------~~~~~~~l~~~v~~~~~~i~~~~~~kg~~~~s~A 256 (340)
++++++++|+++|||+||+ +++|+||++++++ + + ++.+++++.+++++++++|++ +||+|+|++|
T Consensus 153 ~l~v~~~~V~~~v~GeHG~-s~vp~~S~~~v~g~pl~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~---~kG~t~~~~a 228 (299)
T TIGR01771 153 KLGVDPQSVHAYIIGEHGD-SEVPVWSSATIGGVPLLDYLKAKGTETDLDLEEIEKEVRDAAYEIIN---RKGATYYGIG 228 (299)
T ss_pred HhCcCcCeEEEEEEecCCC-ceeeceeeeEECCEEHHHHhhhcccccHHHHHHHHHHHHHHHHHHhh---cCCeeeHHHH
Confidence 9999999999999999998 9999999999864 2 2 123477999999999999999 5789999999
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEee-eeeCCC-CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHHHHHHHHH
Q 019519 257 YAGAIFADACLKGLNGVPDVVECS-FVQSTV-TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEKLKPELKA 329 (340)
Q Consensus 257 ~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~ 329 (340)
.++++++++|+.|.+ .++||+ +++|+| .+|+|||+||+||++|+++++++ +|+++|+++|++|++.||+
T Consensus 229 ~a~~~~i~ail~d~~---~v~~~s~~~~g~yg~~~~~~s~P~~ig~~Gv~~i~~l-~L~~~E~~~l~~s~~~ik~ 299 (299)
T TIGR01771 229 MAVARIVEAILHDEN---RVLPVSAYLDGEYGIKDVYIGVPAVLGRNGVEEIIEL-PLSDEEKEAFQKSAETLKK 299 (299)
T ss_pred HHHHHHHHHHHcCCC---cEEEEEEEecccCCCCCEEEEEEEEEeCCeeEEEccC-CCCHHHHHHHHHHHHHHhC
Confidence 999999999999863 588996 678888 67899999999999999999998 9999999999999999973
No 15
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=100.00 E-value=1.1e-60 Score=464.79 Aligned_cols=301 Identities=26% Similarity=0.301 Sum_probs=265.7
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhC-------CCcceEEEEeCCC--cHHHHHHHhcCCC--CceEEEEecCCcccccc
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLN-------PLVSRLALYDIAN--TPGVAADVGHINT--RSEVAGYMGNDQLGQAL 94 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~-------~~~~el~L~D~~~--~~~~~~dl~~~~~--~~~v~~~~~~~d~~~al 94 (340)
+++.||+||||+|+||+++++.|+.+ +++.||+|+|+++ ++|+++||+|+.+ ..++...+ +| ++++
T Consensus 98 ~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~--~~-ye~~ 174 (444)
T PLN00112 98 KKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGI--DP-YEVF 174 (444)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEec--CC-HHHh
Confidence 45789999998899999999999988 6777999999988 7999999999873 22454332 34 6889
Q ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec
Q 019519 95 EDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAK-YCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV 173 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~-~~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~ 173 (340)
+|||+||+++|.|+++||+|.|++..|.+|++++++.|.+ ++|++++|++|||+|+||+++ ++.+| ++++|+||+
T Consensus 175 kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv~t~v~---~k~sg-~~~~rViGt 250 (444)
T PLN00112 175 QDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNTNALIC---LKNAP-NIPAKNFHA 250 (444)
T ss_pred CcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHHHHHHH---HHHcC-CCCcceEEe
Confidence 9999999999999999999999999999999999999999 589999999999999999998 78999 889999999
Q ss_pred -cchhHHHHHHHHHHHcCCCCCCC-ceeEEEecCCCccccccccCCCCC-C----CChHH--HHHHHHHHhcchhhhhhh
Q 019519 174 -TTLDVVRAKTFYAGKANVNVAEV-NVPVVGGHAGITILPLFSQATPKA-N----LADED--IKALTKRTQDGGTEVVEA 244 (340)
Q Consensus 174 -~~ld~~R~~~~la~~l~v~~~~v-~~~v~G~hg~~~~vp~~s~~~v~~-~----~~~~~--~~~l~~~v~~~~~~i~~~ 244 (340)
|.||++||+++||+++|+++++| +++||||||+ ++||+||++++++ + +++.+ +++|.+++++++++|++
T Consensus 251 gT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGd-sqvp~wS~a~V~G~pl~e~i~~~~~~~~ei~~~v~~~g~~Ii~- 328 (444)
T PLN00112 251 LTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST-TQVPDFLNAKINGLPVKEVITDHKWLEEEFTPKVQKRGGVLIK- 328 (444)
T ss_pred eccHHHHHHHHHHHHHhCcCHHHcccceEEecCCC-ceeeccceeEECCccHHHhhccccchHHHHHHHHHHHHHHHHh-
Confidence 89999999999999999999999 5699999999 9999999999965 2 22222 67999999999999998
Q ss_pred hcCCCCccc-hHHHHHHHHHHHHHcCCCCCCcEEEee-eeeC-CC--CCccEEEEeEEEcCCceEEEe-cCCCCCHHHHH
Q 019519 245 KAGKGSATL-SMAYAGAIFADACLKGLNGVPDVVECS-FVQS-TV--TELPFFASKVRLGKNGVEEVL-GLGPLSDFEQE 318 (340)
Q Consensus 245 ~~~kg~~~~-s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g-~~--~~~~~~svP~~ig~~Gv~~i~-~~~~L~~~E~~ 318 (340)
+||+++| ++|.++++++++|+.+.+ ++.++|++ +++| +| ++|+|||+||++|++|+++++ ++ +|+++|++
T Consensus 329 --~kG~t~~~s~a~ai~~~I~ail~~~d-~~~vlpvsv~l~G~~YGi~~dv~~SvPvvig~~Gv~~Iv~el-~L~~~E~~ 404 (444)
T PLN00112 329 --KWGRSSAASTAVSIADAIKSLVTPTP-EGDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYEIVKDV-EIDDYLRE 404 (444)
T ss_pred --ccCchhHHHHHHHHHHHHHHHHcCCC-CCeEEEEEEEeCCcccCCCCCeEEEeEEEEeCCeeEEECCCC-CCCHHHHH
Confidence 4676766 999999999999995443 24689997 5788 48 589999999999999999999 67 99999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhh
Q 019519 319 GLEKLKPELKASIEKGVKFAN 339 (340)
Q Consensus 319 ~l~~s~~~l~~~~~~~~~~~~ 339 (340)
+|++|+++|+++.+.+...++
T Consensus 405 ~l~~Sa~~L~~e~~~~~~~~~ 425 (444)
T PLN00112 405 RIKKSEAELLAEKRCVAHLTG 425 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999988876553
No 16
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=100.00 E-value=2.3e-60 Score=456.41 Aligned_cols=300 Identities=27% Similarity=0.285 Sum_probs=262.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcc-----eEEEE--eCCC--cHHHHHHHhcCCC--CceEEEEecCCcccccc
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVS-----RLALY--DIAN--TPGVAADVGHINT--RSEVAGYMGNDQLGQAL 94 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~-----el~L~--D~~~--~~~~~~dl~~~~~--~~~v~~~~~~~d~~~al 94 (340)
+++.||+||||+|+||+++++.|+.+++++ +|+|+ |+++ ++|+++||.|+.+ ...+... ++| ++++
T Consensus 42 ~~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~--~~~-y~~~ 118 (387)
T TIGR01757 42 KKTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIG--IDP-YEVF 118 (387)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEe--cCC-HHHh
Confidence 346899999988999999999999999988 57777 5555 6999999999872 2244433 234 6889
Q ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec
Q 019519 95 EDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV 173 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~ 173 (340)
+|||+||++||.||++|++|.|++..|+++++++++.|.+++ |++++|++|||+|+||+++ ++.+| ++|+|+||+
T Consensus 119 kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvDv~t~v~---~k~sg-~~~~rviG~ 194 (387)
T TIGR01757 119 EDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPCNTNALIA---MKNAP-NIPRKNFHA 194 (387)
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHHHHHHHH---HHHcC-CCcccEEEe
Confidence 999999999999999999999999999999999999999988 9999999999999999998 78898 899999999
Q ss_pred -cchhHHHHHHHHHHHcCCCCCCCc-eeEEEecCCCccccccccCCCCC-CC----ChH--HHHHHHHHHhcchhhhhhh
Q 019519 174 -TTLDVVRAKTFYAGKANVNVAEVN-VPVVGGHAGITILPLFSQATPKA-NL----ADE--DIKALTKRTQDGGTEVVEA 244 (340)
Q Consensus 174 -~~ld~~R~~~~la~~l~v~~~~v~-~~v~G~hg~~~~vp~~s~~~v~~-~~----~~~--~~~~l~~~v~~~~~~i~~~ 244 (340)
|.||++||+++||+++++++++|+ ++||||||+ +++|+||++++++ ++ ++. .+++|.+.+++++++|++
T Consensus 195 gT~LDsaR~r~~LA~~l~v~~~~V~~~~V~GeHGd-s~vp~~S~a~V~G~pl~~~~~~~~~~~~ei~~~v~~~g~eIi~- 272 (387)
T TIGR01757 195 LTRLDENRAKCQLALKSGKFYTSVSNVTIWGNHST-TQVPDFVNAKIGGRPAKEVIKDTKWLEEEFTPTVQKRGGALIK- 272 (387)
T ss_pred cchhHHHHHHHHHHHHHCcChhHcceeEEEecCCC-cEEecceeeEECCEEhHHhcccccchHHHHHHHHHHHHHHHHh-
Confidence 899999999999999999999995 999999998 9999999999864 22 222 268999999999999998
Q ss_pred hcCCCCccc-hHHHHHHHHHHHHHcCCCCCCcEEEeee-eeCC-C--CCccEEEEeEEEcCCceEEEe-cCCCCCHHHHH
Q 019519 245 KAGKGSATL-SMAYAGAIFADACLKGLNGVPDVVECSF-VQST-V--TELPFFASKVRLGKNGVEEVL-GLGPLSDFEQE 318 (340)
Q Consensus 245 ~~~kg~~~~-s~A~a~~~li~ai~~~~~~~~~v~~~~~-~~g~-~--~~~~~~svP~~ig~~Gv~~i~-~~~~L~~~E~~ 318 (340)
+||.+.| ++|.++++++++|+++.+. +.++|++. ++|+ | ++|+|||+||++|++|+++++ ++ +|+++|++
T Consensus 273 --~KG~t~~~s~a~ai~~~i~ai~~g~d~-~~il~vsv~~~Ge~YGi~~gv~~S~Pvvig~~Gv~~Iv~~l-~L~~~E~~ 348 (387)
T TIGR01757 273 --KWGRSSAASTAVSIADAIKSLVVPTPE-GDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYELATDV-SMDDFLRE 348 (387)
T ss_pred --ccCchhHHHHHHHHHHHHHHHhcCCCC-CeEEEEEEEeCCcccCCCCCEEEEEEEEEeCCEEEEECCCC-CCCHHHHH
Confidence 4676666 9999999999999954432 35888875 6885 8 589999999999999999996 77 99999999
Q ss_pred HHHHHHHHHHHHHHHHhhhh
Q 019519 319 GLEKLKPELKASIEKGVKFA 338 (340)
Q Consensus 319 ~l~~s~~~l~~~~~~~~~~~ 338 (340)
+|++|+++|+++.+.+++.+
T Consensus 349 ~l~~Sa~~L~~e~~~~~~~~ 368 (387)
T TIGR01757 349 RIRKSEDELLKEKECVAHLI 368 (387)
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999887754
No 17
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=2.7e-60 Score=424.25 Aligned_cols=324 Identities=71% Similarity=1.063 Sum_probs=305.3
Q ss_pred ccccCCCCCCCCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccC
Q 019519 16 AGARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALE 95 (340)
Q Consensus 16 ~~~~~~~~~~~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~ 95 (340)
..++.|++...+..||+|+||+|-+|+.+..+|.+.++++++.|||+....|.+.||+|......+.++++...++++++
T Consensus 16 ~~~~~~~~~~~~~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~ 95 (345)
T KOG1494|consen 16 GPKRVFSSGSQRGLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALK 95 (345)
T ss_pred CCcccccccccCcceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhc
Confidence 44566777776889999999999999999999999999999999999989999999999998889999987788999999
Q ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEeccc
Q 019519 96 DSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGVTT 175 (340)
Q Consensus 96 ~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~~~ 175 (340)
+||+||+.||+||||||+|.|++..|+.|+++++..+.++||+|.+.++|||+|...++++++++..|.|+|+|+||+|.
T Consensus 96 ~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsNPVNstVPIaaevlKk~G~ydpkklfGVTt 175 (345)
T KOG1494|consen 96 GADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTT 175 (345)
T ss_pred CCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeecCcccccchHHHHHHHHcCCCCccceeceeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHcCCCC-CCCceeEEEecCCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhcCCCCccch
Q 019519 176 LDVVRAKTFYAGKANVNV-AEVNVPVVGGHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLS 254 (340)
Q Consensus 176 ld~~R~~~~la~~l~v~~-~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~l~~~v~~~~~~i~~~~~~kg~~~~s 254 (340)
||..|.+.++++.++++| .+++++|+|+|.+.+++|++|+..+...+++++++.++.+++..|.|+.+.|.|+|++.+|
T Consensus 176 LDvVRA~tFv~~~~~~~p~~~v~VPVIGGHaG~TIlPLlSQ~~p~~~~~~~~~~~Lt~RiQ~gGtEVV~AKaGaGSATLS 255 (345)
T KOG1494|consen 176 LDVVRANTFVAEVLNLDPAEDVDVPVIGGHAGITIIPLLSQCKPPFRFTDDEIEALTHRIQNGGTEVVKAKAGAGSATLS 255 (345)
T ss_pred hhhhhHHHHHHHHhCCCchhcCCcceecCcCCceEeeecccCCCcccCCHHHHHHHHHHHHhCCceEEEeccCCCchhhh
Confidence 999999999999999999 5599999999988899999999988667899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeeeeeCCCCCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 019519 255 MAYAGAIFADACLKGLNGVPDVVECSFVQSTVTELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEKLKPELKASIEKG 334 (340)
Q Consensus 255 ~A~a~~~li~ai~~~~~~~~~v~~~~~~~g~~~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~~~~ 334 (340)
+|+|.++++.+++.+..++..++-|+|+....-+-.||+.|+++|++|++++..+++|+++|++.|+.+..+|++.|+++
T Consensus 256 MAyAga~fa~s~lrgl~G~~~v~ecafV~s~~~~~~fFaspv~Lg~~Gv~~v~~l~~lsd~E~~~l~~~~~eLk~sI~KG 335 (345)
T KOG1494|consen 256 MAYAGAKFADSLLRGLNGDEDVVECAFVASPVTELPFFATPVTLGKKGVEEVLGLGKLSDYEEKALEAAKPELKKSIEKG 335 (345)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEeEEeccccCccceeceEEecCCceeeecCCCccCHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999988766678889887664356799999999999999999999999999999999999999999999
Q ss_pred hhhhh
Q 019519 335 VKFAN 339 (340)
Q Consensus 335 ~~~~~ 339 (340)
++|++
T Consensus 336 v~F~~ 340 (345)
T KOG1494|consen 336 VTFVK 340 (345)
T ss_pred HHHHh
Confidence 99986
No 18
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=2.3e-60 Score=450.35 Aligned_cols=295 Identities=30% Similarity=0.365 Sum_probs=261.6
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcc-----eEEEEeCCC----cHHHHHHHhcCCC--CceEEEEecCCccccccCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVS-----RLALYDIAN----TPGVAADVGHINT--RSEVAGYMGNDQLGQALEDS 97 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~-----el~L~D~~~----~~~~~~dl~~~~~--~~~v~~~~~~~d~~~al~~a 97 (340)
.||+||||+|+||+++++.|+.+++++ +|+|+|+++ ++++++||.|+.. ....... ++.+++++||
T Consensus 1 ~KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~---~~~~~~~~~a 77 (323)
T cd00704 1 LHVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVIT---TDPEEAFKDV 77 (323)
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEe---cChHHHhCCC
Confidence 389999988999999999999988888 499999985 6899999999852 2223332 2336999999
Q ss_pred CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEeccch
Q 019519 98 DVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGVTTL 176 (340)
Q Consensus 98 DiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~~~l 176 (340)
|+||++||.|+++|++|.+++..|+++++++++.|+++| |++++|++|||+|+||+++ ++.+|.+|++||||+|.|
T Consensus 78 DiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~---~k~sg~~p~~~vig~t~L 154 (323)
T cd00704 78 DVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPANTNALIA---LKNAPNLPPKNFTALTRL 154 (323)
T ss_pred CEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHH---HHHcCCCCHHHEEEeeHH
Confidence 999999999999999999999999999999999999996 9999999999999999997 789984499999999999
Q ss_pred hHHHHHHHHHHHcCCCCCCC-ceeEEEecCCCccccccccCCCCCC---------CChH-HHHHHHHHHhcchhhhhhhh
Q 019519 177 DVVRAKTFYAGKANVNVAEV-NVPVVGGHAGITILPLFSQATPKAN---------LADE-DIKALTKRTQDGGTEVVEAK 245 (340)
Q Consensus 177 d~~R~~~~la~~l~v~~~~v-~~~v~G~hg~~~~vp~~s~~~v~~~---------~~~~-~~~~l~~~v~~~~~~i~~~~ 245 (340)
|++||++++|++++++|++| .++||||||+ +++|+||++++++. ++++ ..++|.+++++++++|++
T Consensus 155 Ds~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~g~~~~~~~~~~~~~~~~~~~i~~~v~~~~~~Ii~-- 231 (323)
T cd00704 155 DHNRAKAQVARKLGVRVSDVKNVIIWGNHSN-TQVPDLSNAVVYGPGGTEWVLDLLDEEWLNDEFVKTVQKRGAAIIK-- 231 (323)
T ss_pred HHHHHHHHHHHHhCcCHHHceeeeEEecccC-ceeeccccceecCccHHHhcccccChHHHHHHHHHHHHhhHHHHHh--
Confidence 99999999999999999999 5689999999 89999999998642 3333 267899999999999999
Q ss_pred cCCCCccch-HHHHHHHHHHHHHcCCCCCCcEEEee-eeeCCC---CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHH
Q 019519 246 AGKGSATLS-MAYAGAIFADACLKGLNGVPDVVECS-FVQSTV---TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGL 320 (340)
Q Consensus 246 ~~kg~~~~s-~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l 320 (340)
+||+++|+ +|.++++++++|++|.+++ .++||+ +++|+| |+|+|||+||+||++||++++++ +|+++|+++|
T Consensus 232 -~kg~t~~~~~a~a~~~iv~ail~~~~~~-~v~~~s~~~~g~y~gi~~~v~~s~P~~ig~~Gv~~v~~l-~L~~~E~~~l 308 (323)
T cd00704 232 -KRGASSAASAAKAIADHVKDWLFGTPPG-EIVSMGVYSPGNPYGIPPGIVFSFPCTCKGGGWHVVEDL-KLNDWLREKL 308 (323)
T ss_pred -ccCcchhHHHHHHHHHHHHHHHhCCCCC-cEEEEEEEeCCccCCCCCceEEEEEEEEcCCEEEEecCC-CCCHHHHHHH
Confidence 46889896 6999999999999998633 589997 678887 58999999999999999999998 9999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 019519 321 EKLKPELKASIEKGV 335 (340)
Q Consensus 321 ~~s~~~l~~~~~~~~ 335 (340)
++|++.|+++-+.++
T Consensus 309 ~~s~~~l~~~~~~~~ 323 (323)
T cd00704 309 KATEEELIEEKEIAL 323 (323)
T ss_pred HHHHHHHHHHHHhhC
Confidence 999999999988764
No 19
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=7e-60 Score=446.87 Aligned_cols=297 Identities=27% Similarity=0.349 Sum_probs=264.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcc-----eEEEEeCCC----cHHHHHHHhcCCC--CceEEEEecCCccccccC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVS-----RLALYDIAN----TPGVAADVGHINT--RSEVAGYMGNDQLGQALE 95 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~-----el~L~D~~~----~~~~~~dl~~~~~--~~~v~~~~~~~d~~~al~ 95 (340)
+++||+||||+|+||+++++.|+..++++ ||+|+|+++ ++|+++||+|+.. ...+... ++| +++++
T Consensus 1 ~p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~-~~~~~ 77 (322)
T cd01338 1 KPVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT--DDP-NVAFK 77 (322)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe--cCc-HHHhC
Confidence 46799999988999999999999999999 999999954 6899999999873 2234443 234 68899
Q ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEecc
Q 019519 96 DSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGVT 174 (340)
Q Consensus 96 ~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~~ 174 (340)
|||+||+|||.|+++|++|.+++..|+++++++++.|.+++ |++++|++|||+|+||+++ ++.+|++|++||||+|
T Consensus 78 daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~---~k~sg~~p~~~ViG~t 154 (322)
T cd01338 78 DADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIA---MKNAPDIPPDNFTAMT 154 (322)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHH---HHHcCCCChHheEEeh
Confidence 99999999999999999999999999999999999999999 5999999999999999998 7888559999999999
Q ss_pred chhHHHHHHHHHHHcCCCCCCCce-eEEEecCCCccccccccCCCCC-C----CChH--HHHHHHHHHhcchhhhhhhhc
Q 019519 175 TLDVVRAKTFYAGKANVNVAEVNV-PVVGGHAGITILPLFSQATPKA-N----LADE--DIKALTKRTQDGGTEVVEAKA 246 (340)
Q Consensus 175 ~ld~~R~~~~la~~l~v~~~~v~~-~v~G~hg~~~~vp~~s~~~v~~-~----~~~~--~~~~l~~~v~~~~~~i~~~~~ 246 (340)
.||++||++.+|+++|+++++|++ +|||+||+ +++|+||.+++++ + +.+. .++++.+++++++++|++
T Consensus 155 ~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~-s~vp~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~--- 230 (322)
T cd01338 155 RLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP-TQYPDFTNATIGGKPAAEVINDRAWLEDEFIPTVQKRGAAIIK--- 230 (322)
T ss_pred HHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc-cEEEehhhcEECCEeHHHhcChHhhHHHHHHHHHHhhHHHHHh---
Confidence 999999999999999999999998 56999998 9999999998864 2 3343 267999999999999999
Q ss_pred CCCCccchHH-HHHHHHHHHHHcCCCCCCcEEEeee-eeCCC--CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHH
Q 019519 247 GKGSATLSMA-YAGAIFADACLKGLNGVPDVVECSF-VQSTV--TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEK 322 (340)
Q Consensus 247 ~kg~~~~s~A-~a~~~li~ai~~~~~~~~~v~~~~~-~~g~~--~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~ 322 (340)
+||+++|++| .++++++++|++|.+. ..++|+++ ++|+| |+++|||+||++|++||++++++ +|+++|+++|++
T Consensus 231 ~kG~t~~~~~a~a~~~iv~ail~~~~~-~~i~~~sv~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~l-~L~~~E~~~l~~ 308 (322)
T cd01338 231 ARGASSAASAANAAIDHMRDWVLGTPE-GDWFSMAVPSDGSYGIPEGLIFSFPVRSKGGGYEIVEGL-EIDDFAREKIDA 308 (322)
T ss_pred CcCCccHHHHHHHHHHHHHHHhcCCCC-CeEEEEEEEccCccCCCCCeEEEEEEEEeCCEEEEEeCC-CCCHHHHHHHHH
Confidence 5689999999 5999999999998751 25888874 68988 58999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHHHh
Q 019519 323 LKPELKASIEKGV 335 (340)
Q Consensus 323 s~~~l~~~~~~~~ 335 (340)
|++.|+++-++.+
T Consensus 309 s~~~l~~~~~~~~ 321 (322)
T cd01338 309 TLAELLEEREAVK 321 (322)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999987654
No 20
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=100.00 E-value=3e-59 Score=441.65 Aligned_cols=288 Identities=31% Similarity=0.442 Sum_probs=259.2
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCC--CceEEEEecCCccccccCCCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINT--RSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~--~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
+||+|||+ |.||+++++.|+..++..+|+|+|+++ +++.++||.|... ........ .+ ++++++||+||+++
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~--~~-~~~l~~aDIVIita 76 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA--GD-YSDCKDADIVVITA 76 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc--CC-HHHhCCCCEEEEcc
Confidence 38999998 999999999999999888999999987 6888999998753 22233332 34 46799999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec-cchhHHHHHH
Q 019519 105 GVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDVVRAKT 183 (340)
Q Consensus 105 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~-~~ld~~R~~~ 183 (340)
|.|+++|++|.+++.+|+++++++++.|+++||++++|++|||+|++|+++ ++++| +|++||||+ |.||++|+++
T Consensus 77 g~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsNP~d~~~~~~---~~~~g-~p~~~v~g~gt~LDs~R~~~ 152 (306)
T cd05291 77 GAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNPVDVITYVV---QKLSG-LPKNRVIGTGTSLDTARLRR 152 (306)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecChHHHHHHHH---HHHhC-cCHHHEeeccchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999997 77888 999999999 7999999999
Q ss_pred HHHHHcCCCCCCCceeEEEecCCCccccccccCCCCC-C---------CChHHHHHHHHHHhcchhhhhhhhcCCCCccc
Q 019519 184 FYAGKANVNVAEVNVPVVGGHAGITILPLFSQATPKA-N---------LADEDIKALTKRTQDGGTEVVEAKAGKGSATL 253 (340)
Q Consensus 184 ~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~---------~~~~~~~~l~~~v~~~~~~i~~~~~~kg~~~~ 253 (340)
++|+++++++++|+++|||+||+ +++|+||++++++ + +.+++++++.+++++++++|++ +||+++|
T Consensus 153 ~la~~l~v~~~~v~~~V~G~Hg~-s~~~~~S~~~v~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~ii~---~kg~t~~ 228 (306)
T cd05291 153 ALAEKLNVDPRSVHAYVLGEHGD-SQFVAWSTVTVGGKPLLDLLKEGKLSELDLDEIEEDVRKAGYEIIN---GKGATYY 228 (306)
T ss_pred HHHHHHCCCcccceEEEEecCCC-ceeecceeeEEcCEEHHHHhhccccChHHHHHHHHHHHHHHHHHHH---ccCccHH
Confidence 99999999999999999999998 8999999999864 2 2245588999999999999999 5789999
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEee-eeeCCC-CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 019519 254 SMAYAGAIFADACLKGLNGVPDVVECS-FVQSTV-TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEKLKPELKASI 331 (340)
Q Consensus 254 s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~ 331 (340)
++|.++++++++|+++.+ .++|++ +++|+| ++|+|||+||++|++|+++++++ +|+++|+++|++|+++|++.+
T Consensus 229 ~~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~-~l~~~E~~~l~~s~~~l~~~~ 304 (306)
T cd05291 229 GIATALARIVKAILNDEN---AILPVSAYLDGEYGEKDVYIGVPAIIGRNGVEEVIEL-DLTEEEQEKFEKSADIIKENI 304 (306)
T ss_pred HHHHHHHHHHHHHHcCCC---EEEEEEEEeccccCCCCEEEEEEEEEeCCCEEEEECC-CCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999753 578887 578888 78999999999999999999998 999999999999999999876
Q ss_pred H
Q 019519 332 E 332 (340)
Q Consensus 332 ~ 332 (340)
+
T Consensus 305 ~ 305 (306)
T cd05291 305 K 305 (306)
T ss_pred h
Confidence 4
No 21
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=100.00 E-value=2.3e-59 Score=440.90 Aligned_cols=286 Identities=30% Similarity=0.440 Sum_probs=258.6
Q ss_pred EEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCC-ceEEEEecCCccccccCCCCEEEEcCCCC
Q 019519 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTR-SEVAGYMGNDQLGQALEDSDVVIIPAGVP 107 (340)
Q Consensus 31 I~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~-~~v~~~~~~~d~~~al~~aDiVi~~ag~~ 107 (340)
|+|||+ |.||+++++.|+..+++.||+|+|+++ +.++++||.|.... .....+. ++| +++++|||+||+++|.|
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~-~~~-~~~l~~aDiVIitag~p 77 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVR-GGD-YADAADADIVVITAGAP 77 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEE-CCC-HHHhCCCCEEEEcCCCC
Confidence 689998 999999999999999999999999987 68999999998742 2223222 245 47899999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec-cchhHHHHHHHHH
Q 019519 108 RKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDVVRAKTFYA 186 (340)
Q Consensus 108 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~-~~ld~~R~~~~la 186 (340)
+++|++|.+++.+|+++++++++.|+++||++|+|++|||+|++|+++ ++++| +|++||||+ |.||+.|+++++|
T Consensus 78 ~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sNP~d~~~~~~---~~~sg-~~~~kviG~gt~lDs~r~~~~la 153 (300)
T cd00300 78 RKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVSNPVDILTYVA---QKLSG-LPKNRVIGSGTLLDSARFRSLLA 153 (300)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccChHHHHHHHH---HHHhC-cCHHHEEecCCcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999987 78899 999999999 6999999999999
Q ss_pred HHcCCCCCCCceeEEEecCCCccccccccCCCCC-CC------ChHHHHHHHHHHhcchhhhhhhhcCCCCccchHHHHH
Q 019519 187 GKANVNVAEVNVPVVGGHAGITILPLFSQATPKA-NL------ADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAG 259 (340)
Q Consensus 187 ~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~~------~~~~~~~l~~~v~~~~~~i~~~~~~kg~~~~s~A~a~ 259 (340)
+++++++++|+++++|+||+ +++|+||++++++ ++ +++.++++.+++++++++|++ +||+++|++|.++
T Consensus 154 ~~l~v~~~~v~~~viGeHg~-s~v~~~S~~~v~g~p~~~~~~~~~~~~~~l~~~v~~~~~~ii~---~kg~t~~~~a~a~ 229 (300)
T cd00300 154 EKLDVDPQSVHAYVLGEHGD-SQVVAWSTATVGGLPLEELAPFTKLDLEAIEEEVRTSGYEIIR---LKGATNYGIATAI 229 (300)
T ss_pred HHhCCCcccEEEEEEeccCC-ceeeeeeeeEECCEEHHHhhcccHHHHHHHHHHHHHHHHHHHH---ccCcchHHHHHHH
Confidence 99999999999999999998 8999999999864 21 234578999999999999998 5789999999999
Q ss_pred HHHHHHHHcCCCCCCcEEEeee-eeCCC-CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 019519 260 AIFADACLKGLNGVPDVVECSF-VQSTV-TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEKLKPELKASI 331 (340)
Q Consensus 260 ~~li~ai~~~~~~~~~v~~~~~-~~g~~-~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~ 331 (340)
++++++|+++.+ .++|+++ ++|+| ++++|||+||++|++|+++++++ +|+++|+++|++|+++|++.+
T Consensus 230 ~~~~~ai~~~~~---~v~~~s~~~~g~yg~~~~~~s~Pv~ig~~Gi~~i~~l-~L~~~E~~~l~~s~~~l~~~~ 299 (300)
T cd00300 230 ADIVKSILLDER---RVLPVSAVQEGQYGIEDVALSVPAVVGREGVVRILEI-PLTEDEEAKLQKSAEALKEVL 299 (300)
T ss_pred HHHHHHHHcCCC---eEEEEEEEecCccCCCCEEEEEEEEEeCCCeEEEecC-CCCHHHHHHHHHHHHHHHHHh
Confidence 999999999853 5888874 68888 78999999999999999999987 999999999999999999765
No 22
>PTZ00117 malate dehydrogenase; Provisional
Probab=100.00 E-value=7.8e-59 Score=440.44 Aligned_cols=297 Identities=33% Similarity=0.537 Sum_probs=264.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCC--ceEEEEecCCccccccCCCCEEEE
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTR--SEVAGYMGNDQLGQALEDSDVVII 102 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~--~~v~~~~~~~d~~~al~~aDiVi~ 102 (340)
+.+||+|||| |+||+++++.++..++ .+|+|+|+++ +++.++|+.|.... ...... .++|+ ++++|||+||+
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~-~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~-~~~d~-~~l~~ADiVVi 79 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNL-GDVVLYDVIKGVPQGKALDLKHFSTLVGSNINIL-GTNNY-EDIKDSDVVVI 79 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCC-CeEEEEECCCccchhHHHHHhhhccccCCCeEEE-eCCCH-HHhCCCCEEEE
Confidence 4579999998 9999999999998886 6899999987 57889999988531 122222 23576 58999999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEecc-chhHHHH
Q 019519 103 PAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGVT-TLDVVRA 181 (340)
Q Consensus 103 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~~-~ld~~R~ 181 (340)
++|.|+++|++|.|++..|.++++++++.|+++||++|+|++|||+|++|+++ ++.++ +|++||+|+| .||++|+
T Consensus 80 tag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsNP~di~t~~~---~~~s~-~p~~rviG~gt~lds~R~ 155 (319)
T PTZ00117 80 TAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTNPLDCMVKVF---QEKSG-IPSNKICGMAGVLDSSRF 155 (319)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChHHHHHHHH---HHhhC-CCcccEEEecchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987 67787 9999999995 8999999
Q ss_pred HHHHHHHcCCCCCCCceeEEEecCCCccccccccCCCCC-C---------CChHHHHHHHHHHhcchhhhhhhhcCCCCc
Q 019519 182 KTFYAGKANVNVAEVNVPVVGGHAGITILPLFSQATPKA-N---------LADEDIKALTKRTQDGGTEVVEAKAGKGSA 251 (340)
Q Consensus 182 ~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~---------~~~~~~~~l~~~v~~~~~~i~~~~~~kg~~ 251 (340)
++.+|+++++++++|+++++||||+ +++|+||++++++ + +++++++++.+++++++++|++.+ |||++
T Consensus 156 ~~~la~~l~v~~~~v~~~viGeHg~-~~v~~~s~~~v~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~~-~kg~t 233 (319)
T PTZ00117 156 RCNLAEKLGVSPGDVSAVVIGGHGD-LMVPLPRYCTVNGIPLSDFVKKGAITEKEINEIIKKTRNMGGEIVKLL-KKGSA 233 (319)
T ss_pred HHHHHHHhCCCcccceEEEeecCCC-cEEeceeeceECCEEHHHHhhccccCHHHHHHHHHHHHHHHHHHHhhc-CCCCh
Confidence 9999999999999999999999998 8999999998864 1 445568899999999999999975 78999
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEee-eeeCCC-CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHHHHHHHHH
Q 019519 252 TLSMAYAGAIFADACLKGLNGVPDVVECS-FVQSTV-TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEKLKPELKA 329 (340)
Q Consensus 252 ~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~ 329 (340)
+||+|.++++++++|++|.+ .++|++ +++|+| .+|+|||+||++|++|+++++++ +|+++|+++|++|++.|++
T Consensus 234 ~~~~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~~~~s~P~~ig~~Gv~~i~~l-~l~~~E~~~l~~s~~~l~~ 309 (319)
T PTZ00117 234 FFAPAAAIVAMIEAYLKDEK---RVLVCSVYLNGQYNCKNLFVGVPVVIGGKGIEKVIEL-ELNAEEKELFDKSIESIQE 309 (319)
T ss_pred HHHHHHHHHHHHHHHhcCCC---eEEEEEEEeccccCCCCeEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999863 588997 578888 46899999999999999999998 9999999999999999999
Q ss_pred HHHHHhhh
Q 019519 330 SIEKGVKF 337 (340)
Q Consensus 330 ~~~~~~~~ 337 (340)
.++.....
T Consensus 310 ~~~~~~~~ 317 (319)
T PTZ00117 310 LTQKAKAL 317 (319)
T ss_pred HHHHHHHh
Confidence 99876543
No 23
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=100.00 E-value=1.4e-58 Score=438.29 Aligned_cols=290 Identities=34% Similarity=0.590 Sum_probs=261.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCC----CceEEEEecCCccccccCCCCEE
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINT----RSEVAGYMGNDQLGQALEDSDVV 100 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~----~~~v~~~~~~~d~~~al~~aDiV 100 (340)
+++||+|||| |+||+++++.++..++ .+|+|+|+++ +.+.++|+.|... ..++.. ++|+ ++++|||+|
T Consensus 5 ~~~KI~IIGa-G~vG~~ia~~la~~gl-~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~---~~d~-~~l~~aDiV 78 (321)
T PTZ00082 5 KRRKISLIGS-GNIGGVMAYLIVLKNL-GDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG---TNNY-EDIAGSDVV 78 (321)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE---CCCH-HHhCCCCEE
Confidence 3469999997 9999999999998887 4699999988 5788999998742 234443 3575 789999999
Q ss_pred EEcCCCCCCCCC-----CHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEecc-
Q 019519 101 IIPAGVPRKPGM-----TRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGVT- 174 (340)
Q Consensus 101 i~~ag~~~~~g~-----~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~~- 174 (340)
|+++|.|+++|+ +|.+++..|+++++++++.|+++||++|+|++|||+|++++.+ ++.+| +|++||||+|
T Consensus 79 I~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sNP~di~t~~~---~~~sg-~p~~rviGlgt 154 (321)
T PTZ00082 79 IVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITNPLDVMVKLL---QEHSG-LPKNKVCGMAG 154 (321)
T ss_pred EECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH---HHhcC-CChhhEEEecC
Confidence 999999999999 9999999999999999999999999999999999999999987 67888 9999999995
Q ss_pred chhHHHHHHHHHHHcCCCCCCCceeEEEecCCCccccccccCCCCC-C---------CChHHHHHHHHHHhcchhhhhhh
Q 019519 175 TLDVVRAKTFYAGKANVNVAEVNVPVVGGHAGITILPLFSQATPKA-N---------LADEDIKALTKRTQDGGTEVVEA 244 (340)
Q Consensus 175 ~ld~~R~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~---------~~~~~~~~l~~~v~~~~~~i~~~ 244 (340)
.||+.|+++.+|+++++++++|+++++||||+ ++||+||++++++ + +++++++++.+++++++++|++.
T Consensus 155 ~lds~R~~~~la~~l~v~~~~v~~~viGeHg~-s~v~~~S~~~i~g~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~i~~~ 233 (321)
T PTZ00082 155 VLDSSRLRTYIAEKLGVNPRDVHASVIGAHGD-KMVPLPRYVTVGGIPLSEFIKKGLITQEEIDEIVERTRNTGKEIVDL 233 (321)
T ss_pred cccHHHHHHHHHHHhCCCcccceeeEEecCCC-ceEecceeeEECCEEHHHhhhcccCCHHHHHHHHHHHHHHHHHHHhh
Confidence 89999999999999999999999999999998 9999999999864 1 34556889999999999999997
Q ss_pred hcCCCCccchHHHHHHHHHHHHHcCCCCCCcEEEee-eeeCCC-CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHH
Q 019519 245 KAGKGSATLSMAYAGAIFADACLKGLNGVPDVVECS-FVQSTV-TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEK 322 (340)
Q Consensus 245 ~~~kg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~ 322 (340)
+ |||+|+||+|.++++++++|++|.+ .++|++ +++|+| .+|+|+|+||+||++|+++++++ +|+++|+++|++
T Consensus 234 ~-gkg~t~~~ia~a~~~i~~ail~d~~---~v~~vs~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~-~l~~~E~~~l~~ 308 (321)
T PTZ00082 234 L-GTGSAYFAPAAAAIEMAEAYLKDKK---RVLPCSAYLEGQYGHKDIYMGTPAVIGANGVEKIIEL-DLTPEEQKKFDE 308 (321)
T ss_pred c-CCCccHHHHHHHHHHHHHHHHcCCC---cEEEEEEEecccCCCCCeEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHH
Confidence 5 7899999999999999999999864 588997 578888 67999999999999999999998 999999999999
Q ss_pred HHHHHHHHHH
Q 019519 323 LKPELKASIE 332 (340)
Q Consensus 323 s~~~l~~~~~ 332 (340)
|++.|++.++
T Consensus 309 sa~~i~~~~~ 318 (321)
T PTZ00082 309 SIKEVKRLEA 318 (321)
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 24
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=100.00 E-value=1.6e-58 Score=435.48 Aligned_cols=288 Identities=32% Similarity=0.551 Sum_probs=259.9
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCC----CceEEEEecCCccccccCCCCEEEE
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINT----RSEVAGYMGNDQLGQALEDSDVVII 102 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~----~~~v~~~~~~~d~~~al~~aDiVi~ 102 (340)
|||+|||+ |.||+.+|+.++..++. +++|+|+++ ..+.++|+.|... ..+++. ++|+ +++++||+||+
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~-~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~---t~d~-~~~~~aDiVIi 75 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELA-DLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTG---TNNY-ADTANSDIVVI 75 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCC-eEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEe---cCCH-HHhCCCCEEEE
Confidence 69999998 99999999999998876 899999987 4677888877642 234543 3566 45899999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEecc-chhHHHH
Q 019519 103 PAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGVT-TLDVVRA 181 (340)
Q Consensus 103 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~~-~ld~~R~ 181 (340)
++|.|+++|++|.+++..|.+++++++++|.+++|++++|++|||+|+||+++ ++.+| +|++||||+| .||++|+
T Consensus 76 tag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tNP~di~t~~~---~~~sg-~~~~rviG~g~~lds~R~ 151 (305)
T TIGR01763 76 TAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSNPLDAMTYVA---WQKSG-FPKERVIGQAGVLDSARF 151 (305)
T ss_pred cCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH---HHHHC-cCHHHEEEeccchHHHHH
Confidence 99999999999999999999999999999999999999999999999999997 78998 9999999995 8999999
Q ss_pred HHHHHHHcCCCCCCCceeEEEecCCCccccccccCCCCC-C----CChHHHHHHHHHHhcchhhhhhhhcCCCCccchHH
Q 019519 182 KTFYAGKANVNVAEVNVPVVGGHAGITILPLFSQATPKA-N----LADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMA 256 (340)
Q Consensus 182 ~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~----~~~~~~~~l~~~v~~~~~~i~~~~~~kg~~~~s~A 256 (340)
++++|+++++++++|++++|||||+ +++|+||++++++ + +++++++++.+++++++++|++.+ |||+++|++|
T Consensus 152 ~~~la~~l~v~~~~v~~~v~GeHg~-s~~~~wS~~~i~g~~~~~~~~~~~~~~l~~~v~~~g~~ii~~~-~kg~t~~~~a 229 (305)
T TIGR01763 152 RTFIAMELGVSVQDVTACVLGGHGD-AMVPLVRYSTVAGIPVADLISAERIAEIVERTRKGGGEIVNLL-KQGSAYYAPA 229 (305)
T ss_pred HHHHHHHhCcCHHHeeeeEEecCCC-cEEeeeeeeEECCEEHHHhcCHHHHHHHHHHHHHHHHHHHHhc-CCCChHHHHH
Confidence 9999999999999999999999998 8999999999865 2 344458899999999999999975 6899999999
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEee-eeeCCC-CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 019519 257 YAGAIFADACLKGLNGVPDVVECS-FVQSTV-TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEKLKPELKASIE 332 (340)
Q Consensus 257 ~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~~ 332 (340)
.++++++++|+.|.+ .++|++ +++|+| .+++|+|+||++|++|+++++++ +|+++|+++|++|++.|++.++
T Consensus 230 ~~~~~i~~ai~~~~~---~v~~~s~~~~~~yg~~~v~~s~P~~ig~~Gv~~i~~~-~l~~~E~~~l~~s~~~i~~~~~ 303 (305)
T TIGR01763 230 ASVVEMVEAILKDRK---RVLPCAAYLDGQYGIDGIYVGVPVILGKNGVEHIYEL-KLDQSELALLNKSAKIVDENCK 303 (305)
T ss_pred HHHHHHHHHHhCCCC---eEEEEEEEecccCCCCceEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999864 488887 578888 68999999999999999999998 9999999999999999998775
No 25
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=100.00 E-value=1.1e-57 Score=432.24 Aligned_cols=294 Identities=27% Similarity=0.317 Sum_probs=255.1
Q ss_pred eEEEEcCCCChHHHHHHHHHhCCCcc-----eEEEEeCCC----cHHHHHHHhcCCCC--ceEEEEecCCccccccCCCC
Q 019519 30 KVAVLGAAGGIGQPLALLMKLNPLVS-----RLALYDIAN----TPGVAADVGHINTR--SEVAGYMGNDQLGQALEDSD 98 (340)
Q Consensus 30 KI~IiGaaG~VG~~~a~~l~~~~~~~-----el~L~D~~~----~~~~~~dl~~~~~~--~~v~~~~~~~d~~~al~~aD 98 (340)
||+||||+|+||+++++.|+..++++ ||+|+|+++ ++++++||.|+... ..+. .+++.+++++|||
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~~~~~---~~~~~~~~~~~aD 77 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLLDGVV---PTHDPAVAFTDVD 77 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhcCcee---ccCChHHHhCCCC
Confidence 69999988999999999999988875 799999954 57899999999732 2222 1234468999999
Q ss_pred EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec-cch
Q 019519 99 VVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTL 176 (340)
Q Consensus 99 iVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~-~~l 176 (340)
+||++||.|+++|++|.+++..|++++++++++|.+++ |++++|++|||+|+||+++ ++.+| ++|.++||+ |.|
T Consensus 78 iVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v~---~~~sg-~~~~~vig~gt~L 153 (324)
T TIGR01758 78 VAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALVL---SNYAP-SIPPKNFSALTRL 153 (324)
T ss_pred EEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHH---HHHcC-CCCcceEEEeeeh
Confidence 99999999999999999999999999999999999996 9999999999999999997 78898 666679999 899
Q ss_pred hHHHHHHHHHHHcCCCCCCCc-eeEEEecCCCccccccccCCCC-C----CC----ChHH--HHHHHHHHhcchhhhhhh
Q 019519 177 DVVRAKTFYAGKANVNVAEVN-VPVVGGHAGITILPLFSQATPK-A----NL----ADED--IKALTKRTQDGGTEVVEA 244 (340)
Q Consensus 177 d~~R~~~~la~~l~v~~~~v~-~~v~G~hg~~~~vp~~s~~~v~-~----~~----~~~~--~~~l~~~v~~~~~~i~~~ 244 (340)
|++||++++|+++++++++|+ ++||||||+ +++|+||+++++ + ++ +++. ++++.+++++++++|++.
T Consensus 154 Ds~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~~g~~~~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~ 232 (324)
T TIGR01758 154 DHNRALAQVAERAGVPVSDVKNVIIWGNHSS-TQYPDVNHATVTKGGKQKPVREAIKDDAYLDGEFITTVQQRGAAIIRA 232 (324)
T ss_pred HHHHHHHHHHHHhCCChhhceEeEEEECCCC-CcccccccceecCCCCccCHHHHhcchhhHHHHHHHHHHhCHHHHHhc
Confidence 999999999999999999996 699999999 999999999997 5 22 2222 578999999999999996
Q ss_pred hcCCCCccchHHHHHHHHHHHHHcCCCCCCcEEEee-eeeCC-C--CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHH
Q 019519 245 KAGKGSATLSMAYAGAIFADACLKGLNGVPDVVECS-FVQST-V--TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGL 320 (340)
Q Consensus 245 ~~~kg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~-~--~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l 320 (340)
+ +|++.|++|.++++++++|+++.. .+.++|++ +++|+ | |+|+|||+||++|++|++.+.++ +|+++|+++|
T Consensus 233 k--~~~t~~~ia~~~~~i~~ai~~~~~-~~~i~~vs~~~~g~~yg~~~~v~~s~P~~ig~g~~~~i~el-~L~~~E~~~l 308 (324)
T TIGR01758 233 R--KLSSALSAAKAAVDQMHDWVLGTP-EGTFVSMGVYSDGSPYGVPKGLIFSFPVTCKNGEWKIVEGL-CVDDSSRKKL 308 (324)
T ss_pred c--CCCHHHHHHHHHHHHHHHHhcCCC-CCeEEEEEeecCCcccCCCCceEEEEEEEEcCCeEEEecCC-CCCHHHHHHH
Confidence 3 358999999999999999995432 23589997 47888 8 58999999999997777776667 9999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 019519 321 EKLKPELKASIEKGV 335 (340)
Q Consensus 321 ~~s~~~l~~~~~~~~ 335 (340)
++|++.|+++++.++
T Consensus 309 ~~s~~~lk~~~~~~~ 323 (324)
T TIGR01758 309 ALTAKELEEERDEAL 323 (324)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998764
No 26
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=2.2e-57 Score=428.82 Aligned_cols=288 Identities=30% Similarity=0.451 Sum_probs=260.2
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCC-CceEEEEecCCccccccCCCCEEEEcCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINT-RSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~-~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
|||+|||+ |.||+++++.|+..++..|++|+|+++ ..+.++|+.|... ......++ +|+ +++++||+||+++|
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~--~d~-~~l~~aDiViita~ 76 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA--GDY-ADCKGADVVVITAG 76 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee--CCH-HHhCCCCEEEEccC
Confidence 69999998 999999999999999888999999987 5789999998852 12233332 454 78999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec-cchhHHHHHHH
Q 019519 106 VPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDVVRAKTF 184 (340)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~-~~ld~~R~~~~ 184 (340)
.|++++++|.+++..|+++++++++.+++++|+++++++|||+|++|+++ ++.+| +|++||||+ |.||++|++++
T Consensus 77 ~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~tNP~d~~~~~~---~~~sg-~p~~~viG~gt~LDs~R~~~~ 152 (308)
T cd05292 77 ANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVTNPVDVLTYVA---YKLSG-LPPNRVIGSGTVLDTARFRYL 152 (308)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH---HHHHC-cCHHHeecccchhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997 78898 999999999 89999999999
Q ss_pred HHHHcCCCCCCCceeEEEecCCCccccccccCCCCC------------CCChHHHHHHHHHHhcchhhhhhhhcCCCCcc
Q 019519 185 YAGKANVNVAEVNVPVVGGHAGITILPLFSQATPKA------------NLADEDIKALTKRTQDGGTEVVEAKAGKGSAT 252 (340)
Q Consensus 185 la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~------------~~~~~~~~~l~~~v~~~~~~i~~~~~~kg~~~ 252 (340)
+|+++++++++|+++|+|+||+ +++|+||++++++ .+++++++++.+++++++++|++ +||+|+
T Consensus 153 la~~~~v~~~~v~~~viGeHg~-~~~~~~S~~~v~g~~~~~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~---~kg~t~ 228 (308)
T cd05292 153 LGEHLGVDPRSVHAYIIGEHGD-SEVAVWSSANIGGVPLDEFCKLCGRPFDEEVREEIFEEVRNAAYEIIE---RKGATY 228 (308)
T ss_pred HHHHhCCCccceeceeeccCCC-cEEecceeeeECCEEHHHHhhhcccccCHHHHHHHHHHHHHHHHHHHH---cCCccH
Confidence 9999999999999999999998 8999999998864 13335588999999999999999 468999
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEee-eeeCCC-CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 019519 253 LSMAYAGAIFADACLKGLNGVPDVVECS-FVQSTV-TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEKLKPELKAS 330 (340)
Q Consensus 253 ~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~ 330 (340)
|++|.++++++++|+.|.+ .++|++ +++|+| .+++|+|+||+||++|+++++++ +|+++|+++|++|++.|++.
T Consensus 229 ~~~a~a~~~i~~ail~~~~---~v~~~s~~~~g~yg~~~~~~s~P~~ig~~Gv~~i~~~-~L~~~E~~~l~~s~~~i~~~ 304 (308)
T cd05292 229 YAIGLALARIVEAILRDEN---SVLTVSSLLDGQYGIKDVALSLPCIVGRSGVERVLPP-PLSEEEEEALRASAEVLKEA 304 (308)
T ss_pred HHHHHHHHHHHHHHHcCCC---cEEEEEEEEcccCCCCCEEEEEEEEEeCCceEEecCC-CCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999854 588887 578888 57899999999999999999998 99999999999999999988
Q ss_pred HH
Q 019519 331 IE 332 (340)
Q Consensus 331 ~~ 332 (340)
++
T Consensus 305 ~~ 306 (308)
T cd05292 305 IE 306 (308)
T ss_pred Hh
Confidence 75
No 27
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=9.4e-58 Score=433.39 Aligned_cols=297 Identities=28% Similarity=0.338 Sum_probs=260.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcc-----eEEEEeCCC----cHHHHHHHhcCCC--CceEEEEecCCccccccC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVS-----RLALYDIAN----TPGVAADVGHINT--RSEVAGYMGNDQLGQALE 95 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~-----el~L~D~~~----~~~~~~dl~~~~~--~~~v~~~~~~~d~~~al~ 95 (340)
+|.||+||||+|+||+++++.|+..++++ ||+|+|+++ ++++++|+.|+.. ...+.. +++++++++
T Consensus 1 ~~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~---~~~~~~~l~ 77 (325)
T cd01336 1 EPIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVA---TTDPEEAFK 77 (325)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCcee---cCCHHHHhC
Confidence 36799999988999999999999888764 999999954 5788899999752 223332 256679999
Q ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec-
Q 019519 96 DSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV- 173 (340)
Q Consensus 96 ~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~- 173 (340)
|||+||++||.|++++++|.+++..|+++++++++.|++++ |++++|++|||+|+||+++ ++.++.+|+++ ||+
T Consensus 78 ~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~---~k~~~~~~~~~-ig~g 153 (325)
T cd01336 78 DVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALIL---LKYAPSIPKEN-FTAL 153 (325)
T ss_pred CCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHH---HHHcCCCCHHH-EEee
Confidence 99999999999999999999999999999999999999997 7999999999999999997 77865488877 888
Q ss_pred cchhHHHHHHHHHHHcCCCCCCCce-eEEEecCCCccccccccCCCC----C-CC----ChH--HHHHHHHHHhcchhhh
Q 019519 174 TTLDVVRAKTFYAGKANVNVAEVNV-PVVGGHAGITILPLFSQATPK----A-NL----ADE--DIKALTKRTQDGGTEV 241 (340)
Q Consensus 174 ~~ld~~R~~~~la~~l~v~~~~v~~-~v~G~hg~~~~vp~~s~~~v~----~-~~----~~~--~~~~l~~~v~~~~~~i 241 (340)
|.||++||++++|+++++++++|+. +||||||+ +++|+||+++++ + ++ +++ .+++|.+++++++++|
T Consensus 154 t~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG~-s~~~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~i~~~v~~~g~~I 232 (325)
T cd01336 154 TRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHSS-TQYPDVNHATVELNGKGKPAREAVKDDAWLNGEFISTVQKRGAAV 232 (325)
T ss_pred ehHHHHHHHHHHHHHhCcChhhceEeEEEEcCCC-CeeeccccceeecCCCCccHHHHhcccchhHHHHHHHHHhhHHHH
Confidence 8999999999999999999999975 59999999 999999999986 4 22 222 2689999999999999
Q ss_pred hhhhcCCCCccchHHHHHHHHHHHHHcCCCCCCcEEEeee-eeCCC--CCccEEEEeEEEcCCceEEEecCCCCCHHHHH
Q 019519 242 VEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDVVECSF-VQSTV--TELPFFASKVRLGKNGVEEVLGLGPLSDFEQE 318 (340)
Q Consensus 242 ~~~~~~kg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~~-~~g~~--~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~ 318 (340)
++. ++|+++||+|.++++++++|++|.+. +.++|++. ++|+| ++|+|||+||++|++||++++++ +|+++|++
T Consensus 233 i~~--~~g~t~~~~a~~~~~i~~ail~~~~~-~~v~~vs~~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~~-~L~~~E~~ 308 (325)
T cd01336 233 IKA--RKLSSAMSAAKAICDHVHDWWFGTPE-GEFVSMGVYSDGSYGVPEGLIFSFPVTCKNGKWKIVQGL-SIDDFSRE 308 (325)
T ss_pred HHc--cccchHHHHHHHHHHHHHHHHcCCCC-CeEEEEEEecCCCcCCCCceEEEEEEEEeCCEEEEecCC-CCCHHHHH
Confidence 996 35799999999999999999998531 35889874 78998 58999999999999999999998 99999999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 019519 319 GLEKLKPELKASIEKGV 335 (340)
Q Consensus 319 ~l~~s~~~l~~~~~~~~ 335 (340)
+|++|++.|+++++.++
T Consensus 309 ~l~~s~~~l~~e~~~~~ 325 (325)
T cd01336 309 KIDATAKELVEEKETAL 325 (325)
T ss_pred HHHHHHHHHHHHHHhhC
Confidence 99999999999998764
No 28
>PRK06223 malate dehydrogenase; Reviewed
Probab=100.00 E-value=1.9e-55 Score=416.04 Aligned_cols=290 Identities=37% Similarity=0.637 Sum_probs=260.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCC----CceEEEEecCCccccccCCCCEEE
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINT----RSEVAGYMGNDQLGQALEDSDVVI 101 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~----~~~v~~~~~~~d~~~al~~aDiVi 101 (340)
|+||+|||| |.||+++++.++..++. ||+|+|+++ .++.++|+.|... ..+++. ++|+ +++++||+||
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~-ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~---~~d~-~~~~~aDiVi 75 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELG-DVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITG---TNDY-EDIAGSDVVV 75 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCe-EEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEe---CCCH-HHHCCCCEEE
Confidence 579999998 99999999999988877 999999987 5788888887642 234442 3565 6799999999
Q ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec-cchhHHH
Q 019519 102 IPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDVVR 180 (340)
Q Consensus 102 ~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~-~~ld~~R 180 (340)
+++|.|+++|++|.+++.+|+++++++++.|++++|++++|++|||+|++|+++ ++++| +|++||||+ |.||++|
T Consensus 76 i~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~d~~~~~~---~~~s~-~~~~~viG~gt~lds~r 151 (307)
T PRK06223 76 ITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTNPVDAMTYVA---LKESG-FPKNRVIGMAGVLDSAR 151 (307)
T ss_pred ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH---HHHhC-CCcccEEEeCCCcHHHH
Confidence 999999999999999999999999999999999999999999999999999997 78888 999999999 5899999
Q ss_pred HHHHHHHHcCCCCCCCceeEEEecCCCccccccccCCCCC-C----CChHHHHHHHHHHhcchhhhhhhhcCCCCccchH
Q 019519 181 AKTFYAGKANVNVAEVNVPVVGGHAGITILPLFSQATPKA-N----LADEDIKALTKRTQDGGTEVVEAKAGKGSATLSM 255 (340)
Q Consensus 181 ~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~----~~~~~~~~l~~~v~~~~~~i~~~~~~kg~~~~s~ 255 (340)
++++||+++++++++|+++++|+||+ +++|+||++++++ + +++++++++.+.+++++++|++.. +|++++|++
T Consensus 152 ~~~~la~~l~v~~~~v~~~viGehg~-s~~p~~S~~~v~g~~~~~~~~~~~~~~l~~~v~~~~~~ii~~~-~kg~t~~~~ 229 (307)
T PRK06223 152 FRTFIAEELNVSVKDVTAFVLGGHGD-SMVPLVRYSTVGGIPLEDLLSKEKLDEIVERTRKGGAEIVGLL-KTGSAYYAP 229 (307)
T ss_pred HHHHHHHHhCcChhhCcccEEcCCCC-cceEchhhCEECCEEHHHhCChHHHHHHHHHHHHHHHHHHhhc-ccCChhHHH
Confidence 99999999999999999999999998 9999999998864 2 455568899999999999999864 578999999
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEee-eeeCCC-CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 019519 256 AYAGAIFADACLKGLNGVPDVVECS-FVQSTV-TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEKLKPELKASIEK 333 (340)
Q Consensus 256 A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~~~ 333 (340)
|.++++++++++.|.+ .++|++ +++|.| .+|++||+||++|++|+++++++ +|+++|+++|++|+++|++.++.
T Consensus 230 A~~~~~ii~ail~~~~---~~~~~~v~~~g~yg~~~~~~s~P~~i~~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~ 305 (307)
T PRK06223 230 AASIAEMVEAILKDKK---RVLPCSAYLEGEYGVKDVYVGVPVKLGKNGVEKIIEL-ELDDEEKAAFDKSVEAVKKLIEA 305 (307)
T ss_pred HHHHHHHHHHHHcCCC---cEEEEEEEecCcCCCCCeEEEeEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999998754 478886 578887 68999999999999999999998 99999999999999999988764
No 29
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.4e-55 Score=428.76 Aligned_cols=294 Identities=19% Similarity=0.169 Sum_probs=256.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcc-----eEEEEeCC--C--cHHHHHHHhcCCCC--ceEEEEecCCccccccC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVS-----RLALYDIA--N--TPGVAADVGHINTR--SEVAGYMGNDQLGQALE 95 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~-----el~L~D~~--~--~~~~~~dl~~~~~~--~~v~~~~~~~d~~~al~ 95 (340)
++.+|+|+||||++|+++.+.++.+..++ .|+|+|++ + ++|+++||+|+.++ ..+..++ +.+++++
T Consensus 122 ~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~---~~~ea~~ 198 (452)
T cd05295 122 NPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTT---DLDVAFK 198 (452)
T ss_pred CceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEE---CCHHHhC
Confidence 46799999999999999999999876442 69999994 3 69999999998731 2344442 3369999
Q ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC--CcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec
Q 019519 96 DSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCP--NAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV 173 (340)
Q Consensus 96 ~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p--~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~ 173 (340)
|||+||+++|.||++||+|.|++..|.+|++++++.|.+++| ++++|++|||+|++|+++ +++++++|++||+|+
T Consensus 199 daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t~i~---~k~apgiP~~rVig~ 275 (452)
T cd05295 199 DAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSIL---IKYAPSIPRKNIIAV 275 (452)
T ss_pred CCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHH---HHHcCCCCHHHEEEe
Confidence 999999999999999999999999999999999999999999 899999999999999997 788934999999999
Q ss_pred cchhHHHHHHHHHHHcCCCCCCC-ceeEEEecCCCccccccccCCCCC-------------C----CChHH--HHHHHHH
Q 019519 174 TTLDVVRAKTFYAGKANVNVAEV-NVPVVGGHAGITILPLFSQATPKA-------------N----LADED--IKALTKR 233 (340)
Q Consensus 174 ~~ld~~R~~~~la~~l~v~~~~v-~~~v~G~hg~~~~vp~~s~~~v~~-------------~----~~~~~--~~~l~~~ 233 (340)
+.+|++|++++||+++|+++++| +++||||||+ ++||+||++++++ + +.+++ .+++.+.
T Consensus 276 gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~-sqvpd~S~a~V~G~~~a~~~p~~~~~pl~e~i~d~~w~~~~~~~~ 354 (452)
T cd05295 276 ARLQENRAKALLARKLNVNSAGIKDVIVWGNIGG-NTYIDLSKARVYRYDSAIWGPPNYSRPVLELVHDSKWINGEFVAT 354 (452)
T ss_pred cchHHHHHHHHHHHHhCcCHHHceeeEEEEccCC-ceeeeeeEEEEcccccccccccccCccHHHHhcchhhhHHHHHHH
Confidence 77889999999999999999999 6799999999 9999999999853 1 12222 3567778
Q ss_pred HhcchhhhhhhhcCCCCccchHHHHHHHHHHHHHcCCCCCCcEEEee-eeeCCC--CCccEEEEeEEEcCCceEEEecCC
Q 019519 234 TQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDVVECS-FVQSTV--TELPFFASKVRLGKNGVEEVLGLG 310 (340)
Q Consensus 234 v~~~~~~i~~~~~~kg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svP~~ig~~Gv~~i~~~~ 310 (340)
+++++. . +||+++||+|.|+++++++|++|++. ..++|++ +++|+| |+|++||+||+++++|++.+.++
T Consensus 355 v~~rg~---~---rkgsT~~siA~A~~~iv~ail~~t~~-~~ilsvsv~sdG~YGip~gv~~S~Pviig~~Gve~V~~L- 426 (452)
T cd05295 355 LKSLSS---S---LNHEAAISPAHAIATTLSYWYHGSPP-GEIFSLGVISEGWYGIPEGIVFSMPVKFQNGSWEVVTDL- 426 (452)
T ss_pred HHHHHH---h---ccCChHHHHHHHHHHHHHHHHhCCCC-CeEEEEEEeeccccCCcCCEEEEEEEEEeCCeEEEEeCC-
Confidence 888777 2 57899999999999999999999752 2588987 479998 69999999999999999999998
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHh
Q 019519 311 PLSDFEQEGLEKLKPELKASIEKGV 335 (340)
Q Consensus 311 ~L~~~E~~~l~~s~~~l~~~~~~~~ 335 (340)
+|+++|+++|++|+++|+++.+.++
T Consensus 427 ~L~e~E~~kL~~S~~eL~~E~~~~~ 451 (452)
T cd05295 427 ELSEILREVLKRITSDLIQEKLVAL 451 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999987663
No 30
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=100.00 E-value=2.2e-55 Score=415.11 Aligned_cols=288 Identities=28% Similarity=0.477 Sum_probs=257.2
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC----cHHHHHHHhcCCC--C--ceEEEEecCCccccccCCCCEE
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN----TPGVAADVGHINT--R--SEVAGYMGNDQLGQALEDSDVV 100 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~----~~~~~~dl~~~~~--~--~~v~~~~~~~d~~~al~~aDiV 100 (340)
|||+|+||+|.+|+++++.|+..++.+||+|+|+++ +++.++|+.|... . .++.. ++| ++++++||+|
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~---~~d-~~~l~~aDiV 76 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKI---SSD-LSDVAGSDIV 76 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEE---CCC-HHHhCCCCEE
Confidence 699999988999999999999999988999999954 5788899988742 1 23332 346 4679999999
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec-cchhHH
Q 019519 101 IIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDVV 179 (340)
Q Consensus 101 i~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~-~~ld~~ 179 (340)
|+++|.|+++|++|.+++..|+++++++++.|.+++|++++|+++||+|++|+++ ++.+| +|++|+||+ |.||++
T Consensus 77 iitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~npvd~~t~~~---~~~~g-~~~~~viG~gt~LDs~ 152 (309)
T cd05294 77 IITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNPVDVMTYKA---LKESG-FDKNRVFGLGTHLDSL 152 (309)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH---HHhcC-CCHHHEeeccchHHHH
Confidence 9999999999999999999999999999999999999999999999999999987 78999 999999999 689999
Q ss_pred HHHHHHHHHcCCCCCCCceeEEEecCCCccccccccCCCCC-C------CChHHHHHHHHHHhcchhhhhhhhcCCCCcc
Q 019519 180 RAKTFYAGKANVNVAEVNVPVVGGHAGITILPLFSQATPKA-N------LADEDIKALTKRTQDGGTEVVEAKAGKGSAT 252 (340)
Q Consensus 180 R~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~------~~~~~~~~l~~~v~~~~~~i~~~~~~kg~~~ 252 (340)
|+++.||+++++++++|+++++||||+ +++|+||++++++ + +.+..++++.+++++++++|++. ||+++
T Consensus 153 R~~~~la~~l~v~~~~v~~~viGeHg~-s~~~~~S~~~i~g~~~~~~~~~~~~~~~~i~~~v~~~g~~i~~~---kg~t~ 228 (309)
T cd05294 153 RFKVAIAKHFNVHISEVHTRIIGEHGD-SMVPLISSTSIGGIPIKRFPEYKDFDVEKIVETVKNAGQNIISL---KGGSE 228 (309)
T ss_pred HHHHHHHHHHCcChHHeEEEEEecCCC-ceEeeeeecEECCEEHHHhhcccHHHHHHHHHHHHHHHHHHHHh---cCCch
Confidence 999999999999999999999999998 8999999999864 2 12345788999999999999994 57899
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEee-eeeCCC--CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHHHHHHHHH
Q 019519 253 LSMAYAGAIFADACLKGLNGVPDVVECS-FVQSTV--TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEKLKPELKA 329 (340)
Q Consensus 253 ~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~ 329 (340)
||+|.++++++++|++|++ .++|++ +++|+| .+|+++|+||++|++|+++++++ +|+++|+++|++|++.|++
T Consensus 229 ~~~a~~~~~ii~ail~~~~---~v~~vsv~~~g~~~~~~~~~~svP~~ig~~Gv~~i~~l-~l~~~E~~~l~~s~~~i~~ 304 (309)
T cd05294 229 YGPASAISNLVRTIANDER---RILTVSTYLEGEIDGIRDVCIGVPVKLGKNGIEEIVPI-EMDDDEREAFRKSAEIVKK 304 (309)
T ss_pred hhHHHHHHHHHHHHHCCCC---eEEEEEEEECCccCCCCCeEEEeEEEEcCCccEEEeCC-CCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999864 478886 478876 34899999999999999999998 9999999999999999998
Q ss_pred HHH
Q 019519 330 SIE 332 (340)
Q Consensus 330 ~~~ 332 (340)
.++
T Consensus 305 ~~~ 307 (309)
T cd05294 305 YTR 307 (309)
T ss_pred HHh
Confidence 764
No 31
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=100.00 E-value=3.4e-55 Score=413.04 Aligned_cols=285 Identities=37% Similarity=0.625 Sum_probs=256.1
Q ss_pred EEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCC----CceEEEEecCCccccccCCCCEEEEcC
Q 019519 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINT----RSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 31 I~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~----~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
|+|||| |.||+++++.++..++. ||+|+|+++ +.+.++|+.|... ..+++. ++|+ ++++|||+||+++
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~-eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~---t~d~-~~l~dADiVIit~ 74 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELG-DVVLLDIVEGLPQGKALDISQAAPILGSDTKVTG---TNDY-EDIAGSDVVVITA 74 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCc-EEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEE---cCCH-HHhCCCCEEEEec
Confidence 689998 99999999999988877 999999987 5677888887642 224443 2564 7799999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEecc-chhHHHHHH
Q 019519 105 GVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGVT-TLDVVRAKT 183 (340)
Q Consensus 105 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~~-~ld~~R~~~ 183 (340)
|.|+++|++|.+.+.+|++++++++++|+++||++++|++|||+|++|+++ ++++| +|++||||+| .||++|+++
T Consensus 75 g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~sNP~di~t~~~---~~~s~-~~~~rviGlgt~lds~r~~~ 150 (300)
T cd01339 75 GIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVTNPLDVMTYVA---YKASG-FPRNRVIGMAGVLDSARFRY 150 (300)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH---HHHhC-CCHHHEEEecchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999997 68888 9999999995 899999999
Q ss_pred HHHHHcCCCCCCCceeEEEecCCCccccccccCCCCC-C----CChHHHHHHHHHHhcchhhhhhhhcCCCCccchHHHH
Q 019519 184 FYAGKANVNVAEVNVPVVGGHAGITILPLFSQATPKA-N----LADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYA 258 (340)
Q Consensus 184 ~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~----~~~~~~~~l~~~v~~~~~~i~~~~~~kg~~~~s~A~a 258 (340)
++|+++++++++|+++++|+||+ +++|+||++++++ + +++++++++.+++++++++|++.+ |||+++|++|.+
T Consensus 151 ~la~~l~v~~~~v~~~v~G~hg~-~~~~~~s~~~v~g~~~~~~~~~~~~~~~~~~v~~~~~~ii~~k-~~g~t~~~~a~~ 228 (300)
T cd01339 151 FIAEELGVSVKDVQAMVLGGHGD-TMVPLPRYSTVGGIPLTELITKEEIDEIVERTRNGGAEIVNLL-KTGSAYYAPAAA 228 (300)
T ss_pred HHHHHhCCCccceEEEEEeCCCC-cceecceecEECCEEHHHhcChHHHHHHHHHHHHHHHHHHhhc-CCCchhHHHHHH
Confidence 99999999999999999999998 8999999999864 2 344558899999999999999976 679999999999
Q ss_pred HHHHHHHHHcCCCCCCcEEEee-eeeCCC-CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 019519 259 GAIFADACLKGLNGVPDVVECS-FVQSTV-TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEKLKPELKASI 331 (340)
Q Consensus 259 ~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~ 331 (340)
+++++++|+.|.+ .++|++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|++.+
T Consensus 229 ~~~i~~ail~~~~---~i~~~s~~~~g~yg~~~~~~s~P~~ig~~G~~~~~~l-~l~~~E~~~l~~s~~~l~~~~ 299 (300)
T cd01339 229 IAEMVEAILKDKK---RVLPCSAYLEGEYGIKDIFVGVPVVLGKNGVEKIIEL-DLTDEEKEAFDKSVESVKELI 299 (300)
T ss_pred HHHHHHHHHcCCC---cEEEEEEEeccccCCCCeEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999863 588887 578888 56999999999999999999998 999999999999999999765
No 32
>PLN00135 malate dehydrogenase
Probab=100.00 E-value=3.7e-55 Score=411.23 Aligned_cols=271 Identities=25% Similarity=0.295 Sum_probs=241.2
Q ss_pred eEEEEeCCC----cHHHHHHHhcCCC--CceEEEEecCCccccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 019519 56 RLALYDIAN----TPGVAADVGHINT--RSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLC 129 (340)
Q Consensus 56 el~L~D~~~----~~~~~~dl~~~~~--~~~v~~~~~~~d~~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~ 129 (340)
.|+|+|+++ ++|+++||.|+.. ...+.. ++|.+++++|||+||++||.|+++|++|.+++..|++++++++
T Consensus 15 ~l~L~D~~~~~~~a~g~~~Dl~da~~~~~~~i~~---~~~~y~~~~daDiVVitAG~~~k~g~sR~dll~~N~~I~~~i~ 91 (309)
T PLN00135 15 ILHMLDIPPAAEALNGVKMELIDAAFPLLKGVVA---TTDVVEACKGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQA 91 (309)
T ss_pred EEEEecCcccccchhhHHHHHHhhhHHhcCCcEe---cCCHHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 899999976 5899999999872 223432 2454688999999999999999999999999999999999999
Q ss_pred HHHHHh-CCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec-cchhHHHHHHHHHHHcCCCCCCC-ceeEEEecCC
Q 019519 130 SAIAKY-CPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDVVRAKTFYAGKANVNVAEV-NVPVVGGHAG 206 (340)
Q Consensus 130 ~~i~~~-~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~-~~ld~~R~~~~la~~l~v~~~~v-~~~v~G~hg~ 206 (340)
+.|.++ +|++++|++|||+|+||+++ ++.+| +|++|+||+ |.||++||++++|+++++++++| +++||||||+
T Consensus 92 ~~i~~~~~p~aivivvsNPvDv~t~~~---~~~sg-~~~~~vig~gt~LDsaR~r~~la~~l~v~~~~V~~~~VlGeHG~ 167 (309)
T PLN00135 92 SALEKHAAPDCKVLVVANPANTNALIL---KEFAP-SIPEKNITCLTRLDHNRALGQISERLGVPVSDVKNVIIWGNHSS 167 (309)
T ss_pred HHHHHhcCCCeEEEEeCCcHHHHHHHH---HHHcC-CCCccEEEeeehHHHHHHHHHHHHHhCcChhhceeeEEEEcCCC
Confidence 999996 89999999999999999997 78899 999999999 89999999999999999999999 6899999999
Q ss_pred CccccccccCCC----CC-C----CChHH--HHHHHHHHhcchhhhhhhhcCCCCccchHHHHHHHHHHHHHcCCCCCCc
Q 019519 207 ITILPLFSQATP----KA-N----LADED--IKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPD 275 (340)
Q Consensus 207 ~~~vp~~s~~~v----~~-~----~~~~~--~~~l~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~li~ai~~~~~~~~~ 275 (340)
++||+||++++ ++ + +.+++ .+++.+++++++++|++. +||+|+||+|.++++++++|+++++ .+.
T Consensus 168 -s~v~~~S~a~v~~~~~g~p~~e~~~~~~~~~~~i~~~v~~~g~~Ii~~--~kg~t~~~ia~a~~~iv~ai~~~~~-~~~ 243 (309)
T PLN00135 168 -TQYPDVNHATVKTPSGEKPVRELVADDAWLNGEFITTVQQRGAAIIKA--RKLSSALSAASSACDHIRDWVLGTP-EGT 243 (309)
T ss_pred -ceeeccccceEecCCCCcCHHHHhCchhhHHHHHHHHHHHHHHHHHHc--cCccHHHHHHHHHHHHHHHHHhCCc-CCe
Confidence 99999999999 54 2 22333 678999999999999996 3689999999999999999998532 235
Q ss_pred EEEee-eeeCCC--CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 019519 276 VVECS-FVQSTV--TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEKLKPELKASIEKGVKFA 338 (340)
Q Consensus 276 v~~~~-~~~g~~--~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~ 338 (340)
++|++ +++|+| |+|+|||+||++|++|++.++++ +|+++|+++|++|+++|+++.+++++.|
T Consensus 244 v~~vsv~~~g~YGi~~~v~~s~P~vlg~~gve~v~~l-~L~~~E~~~l~~S~~~lk~~~~~~~~~~ 308 (309)
T PLN00135 244 WVSMGVYSDGSYGVPPGLIYSFPVTCEKGEWSIVQGL-SIDEFSRKKMDATAKELKEEKELAYSCL 308 (309)
T ss_pred EEEEEEEecCccCCcCCeEEEEEEEEECCEEEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88987 479998 58999999999999999999898 9999999999999999999999998765
No 33
>TIGR01756 LDH_protist lactate dehydrogenase. This model represents a family of protist lactate dehydrogenases which have aparrently evolved from a recent protist malate dehydrogenase ancestor. Lactate dehydrogenase converts the hydroxyl at C-2 of lactate to a carbonyl in the product, pyruvate. The preference of this enzyme for NAD or NADP has not been determined. A critical residue in malate dehydrogenase, arginine-91 (T. vaginalis numbering) has been mutated to a leucine, eliminating the positive charge which complemeted the carboxylate in malate which is absent in lactate. Several other more subtle changes are proposed to make the active site smaller to accomadate the less bulky lactate molecule.
Probab=100.00 E-value=7.4e-54 Score=403.41 Aligned_cols=271 Identities=22% Similarity=0.269 Sum_probs=236.9
Q ss_pred eEEEEeCCC----cHHHHHHHhcCCC-CceEEEEecCCccccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 019519 56 RLALYDIAN----TPGVAADVGHINT-RSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCS 130 (340)
Q Consensus 56 el~L~D~~~----~~~~~~dl~~~~~-~~~v~~~~~~~d~~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~ 130 (340)
.|+|+|+++ ++|+++||.|+.+ ..+.... ++|++++++|||+||+|||.|+++|++|.+++..|+++++++++
T Consensus 17 ~l~L~D~~~~~~~a~g~a~Dl~d~~~~~~~~~i~--~~~~~~~~~daDiVVitaG~~~k~g~tR~dll~~N~~I~~~i~~ 94 (313)
T TIGR01756 17 CLHLLEIPPALNRLEALAMELEDCAFPNLAGTIV--TTKLEEAFKDIDCAFLVASVPLKPGEVRADLLTKNTPIFKATGE 94 (313)
T ss_pred EEEEecCCCccchhHhHHHHHHHhccccCCceEe--cCCHHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHH
Confidence 899999976 5899999999972 1122222 35666899999999999999999999999999999999999999
Q ss_pred HHHHhCC-CcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec-cchhHHHHHHHHHHHcCCCCCCCcee-EEEecCCC
Q 019519 131 AIAKYCP-NAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDVVRAKTFYAGKANVNVAEVNVP-VVGGHAGI 207 (340)
Q Consensus 131 ~i~~~~p-~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~-~~ld~~R~~~~la~~l~v~~~~v~~~-v~G~hg~~ 207 (340)
.|++++| ++++|++|||+|+||++++ ++.+| +|++ +||+ |.||++||++++|++++++|++|+.+ ||||||+
T Consensus 95 ~i~~~a~~~~ivivvtNPvDv~t~v~~--~~~sg-~p~~-vig~gt~LDsaR~r~~la~~l~v~~~~V~~~~V~GeHG~- 169 (313)
T TIGR01756 95 ALSEYAKPTVKVLVIGNPVNTNCLVAM--LHAPK-LSAE-NFSSLCMLDHNRAVSRIASKLKVPVDHIYHVVVWGNHAE- 169 (313)
T ss_pred HHHhhCCCCeEEEEeCCchHHHHHHHH--HHcCC-CCHH-HEEecccHHHHHHHHHHHHHhCcChhheeeeEEEECCCC-
Confidence 9999995 5889999999999999872 36677 9998 9999 89999999999999999999999655 9999999
Q ss_pred ccccccccCCC--CC-C------CChH-HHHHHHHHHhcchhhhhhhhcCCCCccchHH-HHHHHHHHHHHcCCCCCCcE
Q 019519 208 TILPLFSQATP--KA-N------LADE-DIKALTKRTQDGGTEVVEAKAGKGSATLSMA-YAGAIFADACLKGLNGVPDV 276 (340)
Q Consensus 208 ~~vp~~s~~~v--~~-~------~~~~-~~~~l~~~v~~~~~~i~~~~~~kg~~~~s~A-~a~~~li~ai~~~~~~~~~v 276 (340)
+++|+||++++ ++ + ++++ .++++.+++++++++|++ +||+|+|++| .++++++++|+++++. +.+
T Consensus 170 s~vp~~S~~~V~~~G~~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~---~kg~t~~~~~a~ai~~iv~ail~~~~~-~~i 245 (313)
T TIGR01756 170 SMVADLTHAEFTKNGKHQKVFDELCRDYPEPDFFEVIAQRAWKILE---MRGFTSAASPVKASLQHMKAWLFGTRP-GEV 245 (313)
T ss_pred ceeecccccEEecCCeehhHhhhcCcHhHHHHHHHHHHHHHHHHHh---CcCCcchHHHHHHHHHHHHHHhcCCCC-CeE
Confidence 99999999999 54 2 2332 367899999999999999 5789999977 6999999999996543 368
Q ss_pred EEeee-ee-C-CC--CCccEEEEeEEEcCCceEEEec-CCCCCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 019519 277 VECSF-VQ-S-TV--TELPFFASKVRLGKNGVEEVLG-LGPLSDFEQEGLEKLKPELKASIEKGVKFA 338 (340)
Q Consensus 277 ~~~~~-~~-g-~~--~~~~~~svP~~ig~~Gv~~i~~-~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~ 338 (340)
+|++. ++ + +| ++|+|+|+||++|++|++++++ + +|+++|+++|++|+++|+++.+.+++.|
T Consensus 246 ~pvsv~l~~~g~YGi~~~v~~s~P~vig~~Gv~~ive~l-~L~~~E~~~l~~Sa~~l~~e~~~~~~~~ 312 (313)
T TIGR01756 246 LSMGIPVPEGNPYGIKPGVIFSFPCTVDEDGKVHVVENF-ELNPWLKTKLAQTEKDLFEERETALKAL 312 (313)
T ss_pred EEEEEEecCCCccCCCCCEEEEEEEEEeCCceEEEcCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99975 64 3 78 4799999999999999999999 8 9999999999999999999999998866
No 34
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=100.00 E-value=7.6e-51 Score=376.66 Aligned_cols=254 Identities=34% Similarity=0.503 Sum_probs=228.8
Q ss_pred EEEEcCCCChHHHHHHHHHhCC--CcceEEEEeCCC--cHHHHHHHhcCCCCc-eEEEEecCCccccccCCCCEEEEcCC
Q 019519 31 VAVLGAAGGIGQPLALLMKLNP--LVSRLALYDIAN--TPGVAADVGHINTRS-EVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 31 I~IiGaaG~VG~~~a~~l~~~~--~~~el~L~D~~~--~~~~~~dl~~~~~~~-~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
|+||||+|.+|+++++.|+..+ ...||+|+|+++ +++.++|++|..... ..+.. .++|++++++|||+||+++|
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~-~~~d~~~~~~~aDiVv~t~~ 79 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVS-ITDDPYEAFKDADVVIITAG 79 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEE-ECCchHHHhCCCCEEEECCC
Confidence 6899987999999999999988 778999999987 688999999886321 22322 24677899999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEeccchhHHHHHHHH
Q 019519 106 VPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGVTTLDVVRAKTFY 185 (340)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~~~ld~~R~~~~l 185 (340)
.|+++|++|.+++.+|++++++++++|+++||++|+|++|||+|++|+++ ++++| +|++|+||+|.+|+.|+++++
T Consensus 80 ~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~tNP~d~~t~~~---~~~sg-~~~~kviG~~~ld~~r~~~~l 155 (263)
T cd00650 80 VGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVSNPVDIITYLV---WRYSG-LPKEKVIGLGTLDPIRFRRIL 155 (263)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH---HHHhC-CCchhEEEeecchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997 78888 999999999659999999999
Q ss_pred HHHcCCCCCCCceeEEEecCCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhcCCCCccchHHHHHHHHHHH
Q 019519 186 AGKANVNVAEVNVPVVGGHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADA 265 (340)
Q Consensus 186 a~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~l~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~li~a 265 (340)
|+++++++++|++++||+||+ +++|+||+++ +|.++++++++
T Consensus 156 a~~l~v~~~~v~~~v~G~hg~-~~~~~~s~~~-------------------------------------~a~~~~~ii~a 197 (263)
T cd00650 156 AEKLGVDPDDVKVYILGEHGG-SQVPDWSTVR-------------------------------------IATSIADLIRS 197 (263)
T ss_pred HHHhCCCccceEEEEEEcCCC-ceEeccccch-------------------------------------HHHHHHHHHHH
Confidence 999999999999999999999 8999999763 66889999999
Q ss_pred HHcCCCCCCcEEEee-eeeCCC--CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 019519 266 CLKGLNGVPDVVECS-FVQSTV--TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEKLKPELKASI 331 (340)
Q Consensus 266 i~~~~~~~~~v~~~~-~~~g~~--~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~ 331 (340)
|++|.+ .++|++ +++|+| ++|++||+||++|++|+++++++ +|+++|+++|+++++.++..+
T Consensus 198 i~~~~~---~~~~v~v~~~g~ygi~~~~~~s~P~~i~~~Gi~~~~~~-~l~~~e~~~l~~s~~~~~~~~ 262 (263)
T cd00650 198 LLNDEG---EILPVGVRNNGQIGIPDDVVVSVPCIVGKNGVEEPIEV-GLTDFELEKLQKSADTLKKEL 262 (263)
T ss_pred HHcCCC---EEEEEEEEeCCccCCcCCEEEEEEEEEeCCceEEEecC-CCCHHHHHHHHHHHHHHHHHh
Confidence 999853 578886 478887 68999999999999999888887 999999999999999998765
No 35
>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=2.9e-46 Score=327.65 Aligned_cols=304 Identities=29% Similarity=0.352 Sum_probs=266.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCC-----cceEEEEeCCC----cHHHHHHHhcCCCCceEEEEecCCccccccCCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPL-----VSRLALYDIAN----TPGVAADVGHINTRSEVAGYMGNDQLGQALEDS 97 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~-----~~el~L~D~~~----~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~a 97 (340)
.+.+|.|+||+|++|+++.+.++.+.. -..++|+|+.+ ++|..|+|+|+.++ .+.....++|..++|+|.
T Consensus 3 epirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mELqD~a~P-lL~~Vvattd~~~afkdv 81 (332)
T KOG1496|consen 3 EPIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMELQDCALP-LLKGVVATTDEVEAFKDV 81 (332)
T ss_pred CceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHHHHHHHHHHHHHhhhhh-HHHhhhcccChhhhhccC
Confidence 468999999999999999999986422 23899999987 58999999999864 333333456778999999
Q ss_pred CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEeccch
Q 019519 98 DVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGVTTL 176 (340)
Q Consensus 98 DiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~~~l 176 (340)
|+.|+.+++||++||+|.|++..|.+|++..+..+++|+ |+++++++.||++..+-++ .++++++|.++|-.+|.|
T Consensus 82 ~~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPaNTNali~---~k~ApsIP~kNfs~lTRL 158 (332)
T KOG1496|consen 82 DVAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPANTNALIL---KKFAPSIPEKNFSALTRL 158 (332)
T ss_pred cEEEEeccccCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEEecCccccchhHH---hhhCCCCchhcchhhhhh
Confidence 999999999999999999999999999999999999998 8999999999999999887 678888999999999999
Q ss_pred hHHHHHHHHHHHcCCCCCCC-ceeEEEecCCCccccccccCCCCC---C------CChH-HH-HHHHHHHhcchhhhhhh
Q 019519 177 DVVRAKTFYAGKANVNVAEV-NVPVVGGHAGITILPLFSQATPKA---N------LADE-DI-KALTKRTQDGGTEVVEA 244 (340)
Q Consensus 177 d~~R~~~~la~~l~v~~~~v-~~~v~G~hg~~~~vp~~s~~~v~~---~------~~~~-~~-~~l~~~v~~~~~~i~~~ 244 (340)
|++|+..++|.++|++.++| +..+||+|+. +|+|+..++++.. . ..|. ++ .++.+.|++||..+++.
T Consensus 159 DhNRA~~QlA~klgv~~~~VkNviIWGNHSs-TQyPD~~hA~V~~~~~~~~v~e~v~d~~wL~g~Fi~tVQkRGaavi~a 237 (332)
T KOG1496|consen 159 DHNRALAQLALKLGVPVSDVKNVIIWGNHSS-TQYPDVNHATVNTNGGEKPVKEAVKDDAWLQGEFIETVQKRGAAVIKA 237 (332)
T ss_pred chhhHHHHHHHhhCCchhhcceeEEeccccc-ccCCCccceeeeccCCcccHHHHhccchhhccchhhHHHhcchHhhhh
Confidence 99999999999999999999 6899999998 9999999999852 1 2233 33 58999999999999986
Q ss_pred hcCCCCccchHHHHHHHHHHHHHcCCCCCCcEEEee-eeeCCC--CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHH
Q 019519 245 KAGKGSATLSMAYAGAIFADACLKGLNGVPDVVECS-FVQSTV--TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLE 321 (340)
Q Consensus 245 ~~~kg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~ 321 (340)
.|.++.+|.|.++++++++|+.+++.. .++++. +.+|.| |+|..||+||++ ++|-|+++.-.+++++-++++.
T Consensus 238 --rk~SSA~SaA~aacDhi~dw~~gTpeG-~fvSmgV~sDGsYgip~gli~SfPv~~-k~g~wkiVqgl~iddf~r~km~ 313 (332)
T KOG1496|consen 238 --RKLSSAMSAAKAACDHIRDWWFGTPEG-TFVSMGVYSDGSYGIPDGLIFSFPVTI-KNGDWKIVQGLPIDDFSREKMD 313 (332)
T ss_pred --hhhhhhhhHHHhHhhhhhheecCCCCc-cEEEEeeecCCCCCCCCCeEEEcceEe-cCCceEEEcCcchhHHHHHhhh
Confidence 357899999999999999999999865 356665 579988 999999999999 6799998884499999999999
Q ss_pred HHHHHHHHHHHHHhhhhh
Q 019519 322 KLKPELKASIEKGVKFAN 339 (340)
Q Consensus 322 ~s~~~l~~~~~~~~~~~~ 339 (340)
.++++|+++.+.+..+|+
T Consensus 314 ~t~~EL~eEkd~a~~~l~ 331 (332)
T KOG1496|consen 314 LTAKELKEEKDLAYSCLS 331 (332)
T ss_pred hhHHHHHHhHHHHHHhhc
Confidence 999999999999988775
No 36
>cd05197 GH4_glycoside_hydrolases Glycoside Hydrases Family 4. Glycoside hydrolases cleave glycosidic bonds to release smaller sugars from oligo- or polysaccharides. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by GH4 glycoside hydrolases. Other organisms (such as archaea and Thermotoga maritima) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. GH4 family members include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. They require two cofactors, NAD+ and a divalent metal (Mn2+, Ni2+, Mg2+), for activity. Some also require reducing conditions. GH4 glycoside hydrolases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families in
Probab=100.00 E-value=6.4e-32 Score=264.38 Aligned_cols=280 Identities=20% Similarity=0.191 Sum_probs=191.9
Q ss_pred CeEEEEcCCCChHHHHHH----HHHhCC--C-cceEEEEeCCC-cH----HHHHHHhcCC-CCceEEEEecCCccccccC
Q 019519 29 RKVAVLGAAGGIGQPLAL----LMKLNP--L-VSRLALYDIAN-TP----GVAADVGHIN-TRSEVAGYMGNDQLGQALE 95 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~----~l~~~~--~-~~el~L~D~~~-~~----~~~~dl~~~~-~~~~v~~~~~~~d~~~al~ 95 (340)
|||+|||| |+ ++++ .|+... + .+||+|+|+++ .. ..+..+.+.. ...++.. ++|+++|++
T Consensus 1 ~KI~iIGg-GS---~~tp~li~~l~~~~~~l~~~ei~L~Did~~Rl~~v~~l~~~~~~~~g~~~~v~~---ttD~~~Al~ 73 (425)
T cd05197 1 VKIAIIGG-GS---SFTPELVSGLLKTPEELPISEVTLYDIDEERLDIILTIAKRYVEEVGADIKFEK---TMDLEDAII 73 (425)
T ss_pred CEEEEECC-ch---HhHHHHHHHHHcChhhCCCCEEEEEcCCHHHHHHHHHHHHHHHHhhCCCeEEEE---eCCHHHHhC
Confidence 69999998 74 3444 334333 2 58999999997 22 2223333222 2334544 478999999
Q ss_pred CCCEEEEcC---CC---------CCCCC---CC-----HHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHH
Q 019519 96 DSDVVIIPA---GV---------PRKPG---MT-----RDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIA 155 (340)
Q Consensus 96 ~aDiVi~~a---g~---------~~~~g---~~-----r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~ 155 (340)
||||||.+. |. |.++| ++ ......+|+++++++++.|+++||+||+|++|||+|++|+++
T Consensus 74 gADfVi~~irvGg~~~r~~De~Iplk~G~~gqeT~G~GG~~~alrni~ii~~i~~~i~~~~P~a~lin~TNP~di~t~a~ 153 (425)
T cd05197 74 DADFVINQFRVGGLTYREKDEQIPLKYGVIGQETVGPGGTFSGLRQIPYVLDIARKXEKLSPDAWYLNFTNPAGEVTEAV 153 (425)
T ss_pred CCCEEEEeeecCChHHHHHHHhHHHHcCcccccccCcchhhhhhhhHHHHHHHHHHHHHhCCCcEEEecCChHHHHHHHH
Confidence 999999974 32 44554 22 567778999999999999999999999999999999999987
Q ss_pred HHHHHHhCCCCCCceEeccchhHHHHHHHHHHHcCCCCCCCceeEEE-ecCCCccccccccCCCCC--------------
Q 019519 156 AEVFKKAGTYNEKKLFGVTTLDVVRAKTFYAGKANVNVAEVNVPVVG-GHAGITILPLFSQATPKA-------------- 220 (340)
Q Consensus 156 ~~~~~~sg~~~~~kviG~~~ld~~R~~~~la~~l~v~~~~v~~~v~G-~hg~~~~vp~~s~~~v~~-------------- 220 (340)
++. +|+.|+||+|+. +.|+++.+|+.+|+++++|+++++| ||+. .||..++++
T Consensus 154 ---~~~---~p~~rviG~c~~-~~r~~~~ia~~lgv~~~~v~~~v~GlnHg~-----~~s~~~~~G~~l~p~l~~~~~~~ 221 (425)
T cd05197 154 ---RRY---VPPEKAVGLCNV-PIGVMEIVAKLLGESEEKVDWQYAGLNHGI-----WLNRVRYNGGDVTPKLDEWVEEK 221 (425)
T ss_pred ---HHh---CCCCcEEEECCC-HHHHHHHHHHHhCCCHHHeEEEEEeccCeE-----eeEeEEECCeecHHHHHHHHhcc
Confidence 554 467899999877 7899999999999999999999999 9974 233222110
Q ss_pred ------------------------------C------CC----hH-------------HH----HHHHHHHhcch--hhh
Q 019519 221 ------------------------------N------LA----DE-------------DI----KALTKRTQDGG--TEV 241 (340)
Q Consensus 221 ------------------------------~------~~----~~-------------~~----~~l~~~v~~~~--~~i 241 (340)
+ +. ++ +. +++.+..++.. ...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~~~~~~~~~ 301 (425)
T cd05197 222 SKDWKTENPFVDQLSPAAIDFYRFYGVLPNPYLRYYLSWDKXRKLEADKEITWKTRADEVGKVEKELFEVYKFIKENPSV 301 (425)
T ss_pred CccccccccccccccchHHHHHHhCCCcccCCccccCccchhhhhhHHhhcccCccHHHHHHHHHHHHHHHhhhhhcCCh
Confidence 0 00 00 00 01111111100 000
Q ss_pred hhhhcCCCCccchHHHHHHHHHHHHHcCCCCCCcEEEee-eeeCCC---CCccEEEEeEEEcCCceEEEecCCCCCHHHH
Q 019519 242 VEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDVVECS-FVQSTV---TELPFFASKVRLGKNGVEEVLGLGPLSDFEQ 317 (340)
Q Consensus 242 ~~~~~~kg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~ 317 (340)
-++ ..++.+.++ ..++++++||++|.+. ++.++ -++|.+ |+|.++++||+++++|+.++ .+++|++...
T Consensus 302 ~~~-~~r~~~~~~--e~a~~ii~ai~~~~~~---~~~vNv~N~G~I~nLp~d~vVEvp~~v~~~Gi~P~-~vg~lp~~~~ 374 (425)
T cd05197 302 VEL-IKRGGRKYS--EAAIPLIRALLNDNGA---RFVVNTRNNGAIANIDDDVVVEVPCLVDKNGPHPI-KVGPLDRFVK 374 (425)
T ss_pred hhh-hhcCCcccH--HHHHHHHHHHHcCCCe---EEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceec-ccCCCCHHHH
Confidence 000 012345555 8899999999998752 44444 477875 89999999999999999997 6679999888
Q ss_pred HHHHHHHHHHHHHHHHH
Q 019519 318 EGLEKLKPELKASIEKG 334 (340)
Q Consensus 318 ~~l~~s~~~l~~~~~~~ 334 (340)
++++.-...-+-.++.+
T Consensus 375 ~Li~~~~~~e~l~veAa 391 (425)
T cd05197 375 GLLRQRKMRERLALEAF 391 (425)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 87776444433344433
No 37
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=100.00 E-value=3.5e-33 Score=234.77 Aligned_cols=137 Identities=44% Similarity=0.683 Sum_probs=124.2
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCc--eEEEEecCCccccccCCCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRS--EVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~--~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
|||+||||+|.||+++++.|++.++++||+|+|+++ ++++++||+|..... ...... .+ +++++|||+||+++
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~--~~-~~~~~~aDivvita 77 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS--GD-YEALKDADIVVITA 77 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE--SS-GGGGTTESEEEETT
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc--cc-ccccccccEEEEec
Confidence 699999988999999999999999999999999996 799999999986432 333332 33 68999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEe
Q 019519 105 GVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFG 172 (340)
Q Consensus 105 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG 172 (340)
|.|+++|++|.+++..|.+++++++++|.+++|+++++++|||+|++|+++ ++++| +|++|+||
T Consensus 78 g~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvtNPvd~~t~~~---~~~s~-~~~~kviG 141 (141)
T PF00056_consen 78 GVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVTNPVDVMTYVA---QKYSG-FPPNKVIG 141 (141)
T ss_dssp STSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-SSSHHHHHHHH---HHHHT-SSGGGEEE
T ss_pred cccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeCCcHHHHHHHH---HHhhC-cCcccCcC
Confidence 999999999999999999999999999999999999999999999999997 78898 99999998
No 38
>PF02866 Ldh_1_C: lactate/malate dehydrogenase, alpha/beta C-terminal domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR022383 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the C-terminal, and is thought to be an is an unusual alpha+beta fold.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process; PDB: 4MDH_B 5MDH_A 1GV0_A 1GUZ_D 2EWD_B 2FRM_D 2FNZ_B 2FN7_B 2FM3_A 1LTH_T ....
Probab=100.00 E-value=8.9e-33 Score=240.61 Aligned_cols=159 Identities=37% Similarity=0.551 Sum_probs=144.0
Q ss_pred cchhHHHHHHHHHHHcCCCCCCCceeEEEecCCCccccccccCCCCC-----------CCChHHHHHHHHHHhcchhhhh
Q 019519 174 TTLDVVRAKTFYAGKANVNVAEVNVPVVGGHAGITILPLFSQATPKA-----------NLADEDIKALTKRTQDGGTEVV 242 (340)
Q Consensus 174 ~~ld~~R~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-----------~~~~~~~~~l~~~v~~~~~~i~ 242 (340)
|.||++||++++|+++|++|++++++|||+||+ ++||+||++++++ .+++++++++.+++++++++|+
T Consensus 1 T~LDs~R~~~~la~~l~v~~~~v~~~ViGeHg~-s~~~~~S~~~v~g~pl~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii 79 (174)
T PF02866_consen 1 TMLDSARFRYFLAEKLGVNPSSVNAYVIGEHGD-SQVPDWSHAKVGGVPLLSYAKPSGKLSEEELEELTERVRKAGYEII 79 (174)
T ss_dssp THHHHHHHHHHHHHHHTSGGGGEEEEEEBSSST-TEEEEGGGEEETTEEHHHHHHTTTSSSHHHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHCcCccceEEEEEecCCc-ceeeeeecccccccccccccccccchhHHhhhccccccEeccceee
Confidence 679999999999999999999999999999999 9999999999863 2566778999999999999999
Q ss_pred hhhcCCCCccchHHHHHHHHHHHHHcCCCCCCcEEEee-eeeCCC--CCc-cEEEEeEEEcCCceEEEecCCCCCHHHHH
Q 019519 243 EAKAGKGSATLSMAYAGAIFADACLKGLNGVPDVVECS-FVQSTV--TEL-PFFASKVRLGKNGVEEVLGLGPLSDFEQE 318 (340)
Q Consensus 243 ~~~~~kg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~-~~~svP~~ig~~Gv~~i~~~~~L~~~E~~ 318 (340)
+.+. |+++||+|.++++++++|+.|.+ .++|++ +.+|+| +++ +|||+||++|++|++++++.++|+++|++
T Consensus 80 ~~k~--g~t~~s~A~a~~~~v~ail~~~~---~i~~~sv~~~g~yg~~~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~ 154 (174)
T PF02866_consen 80 KAKG--GSTSYSIAAAAARIVEAILKDER---RILPVSVYLDGEYGIPDGCVYFSVPVVIGKNGVEKIVEDLPLSEEEQE 154 (174)
T ss_dssp HHHS--SSCHHHHHHHHHHHHHHHHTTHT---EEEEEEEEEESGGGEESSSEEEEEEEEEETTEEEEEECSBSSTHHHHH
T ss_pred eecc--ccCcCCHHHHHHHHHHHHhhccc---ccccceeccccccCcccccceecceEEEcCCeeEEEeCCCCCCHHHHH
Confidence 9652 89999999999999999999973 578886 578988 344 99999999999999999993399999999
Q ss_pred HHHHHHHHHHHHHHHHhhhh
Q 019519 319 GLEKLKPELKASIEKGVKFA 338 (340)
Q Consensus 319 ~l~~s~~~l~~~~~~~~~~~ 338 (340)
+|++|++.|+++++++++|+
T Consensus 155 ~l~~sa~~l~~~i~~~~~f~ 174 (174)
T PF02866_consen 155 KLKESAKELKKEIEKGLEFV 174 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999985
No 39
>PRK15076 alpha-galactosidase; Provisional
Probab=100.00 E-value=1.3e-31 Score=262.94 Aligned_cols=286 Identities=16% Similarity=0.166 Sum_probs=194.8
Q ss_pred CCeEEEEcCCCChHHHHHH--HHH-hCCCc-ceEEEEeCCC--cH-HHHHHHhcCC----CCceEEEEecCCccccccCC
Q 019519 28 DRKVAVLGAAGGIGQPLAL--LMK-LNPLV-SRLALYDIAN--TP-GVAADVGHIN----TRSEVAGYMGNDQLGQALED 96 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~--~l~-~~~~~-~el~L~D~~~--~~-~~~~dl~~~~----~~~~v~~~~~~~d~~~al~~ 96 (340)
|+||+|||| |++|++.++ .++ ..++. .||+|+|+++ .+ +.++ +.+.. ...+++. ++|++++++|
T Consensus 1 ~~KIaIIGa-Gsvg~~~~~~~~i~~~~~l~~~evvLvDid~er~~~~~~l-~~~~~~~~~~~~~i~~---ttD~~eal~d 75 (431)
T PRK15076 1 MPKITFIGA-GSTVFTKNLLGDILSVPALRDAEIALMDIDPERLEESEIV-ARKLAESLGASAKITA---TTDRREALQG 75 (431)
T ss_pred CcEEEEECC-CHHHhHHHHHHHHhhCccCCCCEEEEECCCHHHHHHHHHH-HHHHHHhcCCCeEEEE---ECCHHHHhCC
Confidence 479999998 999988877 665 33444 4999999987 22 3332 33321 2235554 3688899999
Q ss_pred CCEEEEcCCCC-CCCC--------------CCHHHH--------HHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHH
Q 019519 97 SDVVIIPAGVP-RKPG--------------MTRDDL--------FNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVP 153 (340)
Q Consensus 97 aDiVi~~ag~~-~~~g--------------~~r~~~--------~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~ 153 (340)
|||||++++.+ ++++ ++|.+. +.+|+++++++++.|+++||+||+|++|||+|++|+
T Consensus 76 ADfVv~ti~vg~~~~~~~~De~Iplk~G~~~~r~et~G~GG~~~~~r~i~~i~~i~~~i~~~~p~a~iin~tNP~divt~ 155 (431)
T PRK15076 76 ADYVINAIQVGGYEPCTVTDFEIPKKYGLRQTIGDTLGIGGIMRALRTIPVLLDICEDMEEVCPDALLLNYVNPMAMNTW 155 (431)
T ss_pred CCEEeEeeeeCCcchhhhhhhhhHHHcCCeeecccCcCccchhhhhhhHHHHHHHHHHHHHHCCCeEEEEcCChHHHHHH
Confidence 99999999876 4434 445555 899999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCceEeccc--hhHHHHHHHHHHHcCCCCCCCceeEEE-ecCC---------Ccccccccc---CC-
Q 019519 154 IAAEVFKKAGTYNEKKLFGVTT--LDVVRAKTFYAGKANVNVAEVNVPVVG-GHAG---------ITILPLFSQ---AT- 217 (340)
Q Consensus 154 ~~~~~~~~sg~~~~~kviG~~~--ld~~R~~~~la~~l~v~~~~v~~~v~G-~hg~---------~~~vp~~s~---~~- 217 (340)
++ + + +|+.||||+|+ +++ .+.+|+.+|+++++|++++.| ||.. ++.+|.+.. ..
T Consensus 156 ~~---~---~-~~~~rviG~c~~~~~~---~~~ia~~l~v~~~~v~~~~~GlNH~~W~~~~~~~G~D~~p~l~~~~~~~~ 225 (431)
T PRK15076 156 AM---N---R-YPGIKTVGLCHSVQGT---AEQLARDLGVPPEELRYRCAGINHMAWYLELERKGEDLYPELRAAAAEGQ 225 (431)
T ss_pred HH---h---c-CCCCCEEEECCCHHHH---HHHHHHHhCCCHHHeEEEEEeecchhhheeeeECCcchHHHHHHHHhccC
Confidence 86 3 4 88899999983 565 388999999999999999999 3332 234442111 00
Q ss_pred ------CC-----------C----------C-C----ChHHHHHHHH----HHh------cchhhhh-hhhcCCCC--cc
Q 019519 218 ------PK-----------A----------N-L----ADEDIKALTK----RTQ------DGGTEVV-EAKAGKGS--AT 252 (340)
Q Consensus 218 ------v~-----------~----------~-~----~~~~~~~l~~----~v~------~~~~~i~-~~~~~kg~--~~ 252 (340)
+. + + + .++.++++.. ..+ ....+.. +...++.. ..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~y~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (431)
T PRK15076 226 TRCQDKVRYEMLKRFGYFVTESSEHFAEYVPWFIKPGRPDLIERFNIPLDEYPRRCEEQIANWEKEREELANAERIEIKR 305 (431)
T ss_pred chhcccccHHHHHHhCCCcccchhhhhhhhcccCcCCCHHHHHHhhcccchhhhhHHHHhhhHHHHHHHhhCCCcccccc
Confidence 00 0 0 1 2222222211 100 1111111 11111101 22
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEeee-eeCCC---CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHHHHHHHH
Q 019519 253 LSMAYAGAIFADACLKGLNGVPDVVECSF-VQSTV---TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEKLKPELK 328 (340)
Q Consensus 253 ~s~A~a~~~li~ai~~~~~~~~~v~~~~~-~~g~~---~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~ 328 (340)
+ +..++++++||++|.+ .++.+++ ++|.+ |+|.++++||+++++|+.++ .+++||+..+++++.-...=+
T Consensus 306 ~--~e~a~~ii~ai~~~~~---~~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~-~~g~lP~~~~~l~~~~~~~e~ 379 (431)
T PRK15076 306 S--REYASTIIEAIETGEP---SVIYGNVRNNGLIDNLPQGCCVEVPCLVDRNGIQPT-KVGDLPPQLAALNRTNINVQE 379 (431)
T ss_pred c--hHHHHHHHHHHhcCCc---eEEEEECCCCCcCCCCCCCCEEEEeEEEcCCcceee-ecCCCCHHHHHHHHHHHHHHH
Confidence 3 4789999999998875 2444554 67875 89999999999999999997 567999999998877554444
Q ss_pred HHHHHH
Q 019519 329 ASIEKG 334 (340)
Q Consensus 329 ~~~~~~ 334 (340)
-.++.+
T Consensus 380 l~veAa 385 (431)
T PRK15076 380 LTVEAA 385 (431)
T ss_pred HHHHHH
Confidence 344443
No 40
>cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein
Probab=100.00 E-value=4.4e-31 Score=258.06 Aligned_cols=288 Identities=17% Similarity=0.190 Sum_probs=192.8
Q ss_pred CeEEEEcCCCChHH-HHHHHHHhC-C--CcceEEEEeCC-C-cH----HHHHHHhcCC-CCceEEEEecCCccccccCCC
Q 019519 29 RKVAVLGAAGGIGQ-PLALLMKLN-P--LVSRLALYDIA-N-TP----GVAADVGHIN-TRSEVAGYMGNDQLGQALEDS 97 (340)
Q Consensus 29 ~KI~IiGaaG~VG~-~~a~~l~~~-~--~~~el~L~D~~-~-~~----~~~~dl~~~~-~~~~v~~~~~~~d~~~al~~a 97 (340)
|||+|||| |++-. .+...|+.. . ..+||+|+|++ + .. ..+.++.+.. ...++.. ++|+++|++||
T Consensus 1 ~KI~iIGa-GS~~tp~li~~l~~~~~~l~~~ei~L~Did~~~rl~~v~~~~~~~~~~~~~~~~v~~---t~d~~~al~ga 76 (419)
T cd05296 1 MKLTIIGG-GSSYTPELIEGLIRRYEELPVTELVLVDIDEEEKLEIVGALAKRMVKKAGLPIKVHL---TTDRREALEGA 76 (419)
T ss_pred CEEEEECC-chHhHHHHHHHHHhccccCCCCEEEEecCChHHHHHHHHHHHHHHHHhhCCCeEEEE---eCCHHHHhCCC
Confidence 69999998 85421 223344442 2 35899999999 5 21 1122222222 2334544 47899999999
Q ss_pred CEEEEcCCCCCCCCCC--------------------HHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHH
Q 019519 98 DVVIIPAGVPRKPGMT--------------------RDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAE 157 (340)
Q Consensus 98 DiVi~~ag~~~~~g~~--------------------r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~ 157 (340)
||||++++++..++++ ......+|+++++++++.|+++|||||+|++|||+|++|+++
T Consensus 77 dfVi~~~~vg~~~~r~~de~i~~~~Gi~gqET~G~GG~~~a~rni~ii~~i~~~i~~~~Pda~lin~TNP~~ivt~a~-- 154 (419)
T cd05296 77 DFVFTQIRVGGLEARALDERIPLKHGVIGQETTGAGGFAKALRTIPVILDIAEDVEELAPDAWLINFTNPAGIVTEAV-- 154 (419)
T ss_pred CEEEEEEeeCCcchhhhhhhhHHHcCCccccCCCcchHHHhhhhHHHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH--
Confidence 9999998765544433 334578999999999999999999999999999999999987
Q ss_pred HHHHhCCCCCCceEeccchhHHHHHHHHHHHcCCCCCCCceeEEE-ecCC---------Cccccccc-------------
Q 019519 158 VFKKAGTYNEKKLFGVTTLDVVRAKTFYAGKANVNVAEVNVPVVG-GHAG---------ITILPLFS------------- 214 (340)
Q Consensus 158 ~~~~sg~~~~~kviG~~~ld~~R~~~~la~~l~v~~~~v~~~v~G-~hg~---------~~~vp~~s------------- 214 (340)
++.+ +.|+||+|+.+ .|+++.+|+.+|+++++|+++++| ||.. ++.+|.+-
T Consensus 155 -~k~~----~~rviGlc~~~-~r~~~~ia~~lg~~~~~v~~~v~GlNH~~w~~~~~~~G~D~~p~l~~~~~~~~~~~~~~ 228 (419)
T cd05296 155 -LRHT----GDRVIGLCNVP-IGLQRRIAELLGVDPEDVFIDYAGLNHLGWLRRVLLDGEDVLPELLEDLAALLSFEEGL 228 (419)
T ss_pred -HHhc----cCCEEeeCCcH-HHHHHHHHHHhCCCHHHceEEEEecccceeeeeeeECCcccHHHHHHHhhhcccccccc
Confidence 4543 68999999875 799999999999999999999999 7765 24455211
Q ss_pred ---cCCC---C---CC------CChH--------------HHH----HHHHHHhcchh-hhhhhhcCCCCccchHHHHHH
Q 019519 215 ---QATP---K---AN------LADE--------------DIK----ALTKRTQDGGT-EVVEAKAGKGSATLSMAYAGA 260 (340)
Q Consensus 215 ---~~~v---~---~~------~~~~--------------~~~----~l~~~v~~~~~-~i~~~~~~kg~~~~s~A~a~~ 260 (340)
.... + ++ +.++ .++ ++.+....... +..+....++.++|+ ..++
T Consensus 229 ~~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~r~e~~~~~~~~l~~~~~~~~~~~~~~~~~~r~g~~y~--e~a~ 306 (419)
T cd05296 229 LFGPELLRALGALPNEYLRYYYQTDEALEEILEAAGTRGEVVKEVEKELFELYKDPNLDEKPKELEKRGGAGYS--EAAL 306 (419)
T ss_pred chHHHHHHhcCCcccchHHHHCCcHHHHHHhhhhccchHHHHHHHHHHHHHHHhccccccChHhhHhhcCcchH--HHHH
Confidence 1000 0 00 0111 111 11122221100 000000123445566 8899
Q ss_pred HHHHHHHcCCCCCCcEEEee-eeeCCC---CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 019519 261 IFADACLKGLNGVPDVVECS-FVQSTV---TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEKLKPELKASIEKG 334 (340)
Q Consensus 261 ~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~~~~ 334 (340)
++++||++|.+. ++.++ .++|.+ |+|.++++||.++++|+.++ .+++||+...++++.-...-+-.++.+
T Consensus 307 ~ii~ai~~~~~~---~~~vNv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~-~vg~lP~~~~~l~~~~~~~e~l~veAa 380 (419)
T cd05296 307 ALISAIYNDKGD---IHVVNVRNNGAIPGLPDDAVVEVPCVVDADGAHPL-PVGPLPPAILGLIQQVKAYERLTIEAA 380 (419)
T ss_pred HHHHHHhcCCCc---EEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceec-cCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988652 34444 477875 89999999999999999997 667999999888766444333334433
No 41
>cd05298 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases. Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductas
Probab=99.97 E-value=3e-29 Score=245.98 Aligned_cols=288 Identities=16% Similarity=0.179 Sum_probs=190.1
Q ss_pred CeEEEEcCCCCh-HHHHHHHHHhC-C-C-cceEEEEeCCC-cH----HHHHHHhcC-CCCceEEEEecCCccccccCCCC
Q 019519 29 RKVAVLGAAGGI-GQPLALLMKLN-P-L-VSRLALYDIAN-TP----GVAADVGHI-NTRSEVAGYMGNDQLGQALEDSD 98 (340)
Q Consensus 29 ~KI~IiGaaG~V-G~~~a~~l~~~-~-~-~~el~L~D~~~-~~----~~~~dl~~~-~~~~~v~~~~~~~d~~~al~~aD 98 (340)
|||+|||| |++ +..+...|++. . + .+||+|+|+++ .. ..+..+.+. ....+++. ++|+++|++|||
T Consensus 1 ~KI~iIGa-GS~~tp~li~~l~~~~~~l~~~ei~L~DId~~rl~~v~~l~~~~~~~~g~~~~v~~---Ttdr~eAl~gAD 76 (437)
T cd05298 1 FKIVIAGG-GSTYTPGIVKSLLDRKEDFPLRELVLYDIDAERQEKVAEAVKILFKENYPEIKFVY---TTDPEEAFTDAD 76 (437)
T ss_pred CeEEEECC-cHHHHHHHHHHHHhCcccCCCCEEEEECCCHHHHHHHHHHHHHHHHhhCCCeEEEE---ECCHHHHhCCCC
Confidence 79999998 743 11223344444 2 3 58999999997 22 222233222 22334544 478999999999
Q ss_pred EEEEcC---CC---------CCCCCC---C-----HHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHH
Q 019519 99 VVIIPA---GV---------PRKPGM---T-----RDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEV 158 (340)
Q Consensus 99 iVi~~a---g~---------~~~~g~---~-----r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~ 158 (340)
|||.+. |. |.++|. + ......||+++++++++.|+++|||||+|++|||+|++|+++
T Consensus 77 fVi~~irvGg~~~r~~De~Ip~kyGi~gqET~G~GG~~~alRtip~~~~i~~~i~~~~pda~lin~tNP~~~vt~~~--- 153 (437)
T cd05298 77 FVFAQIRVGGYAMREQDEKIPLKHGVVGQETCGPGGFAYGLRSIGPMIELIDDIEKYSPDAWILNYSNPAAIVAEAL--- 153 (437)
T ss_pred EEEEEeeeCCchHHHHHHhHHHHcCcceecCccHHHHHHHHhhHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH---
Confidence 999974 32 445542 2 466788999999999999999999999999999999999987
Q ss_pred HHHhCCCCCCceEeccchhHHHHHHHHHHHcCCCCCCCceeEEE-ecCC----------Ccccccccc------------
Q 019519 159 FKKAGTYNEKKLFGVTTLDVVRAKTFYAGKANVNVAEVNVPVVG-GHAG----------ITILPLFSQ------------ 215 (340)
Q Consensus 159 ~~~sg~~~~~kviG~~~ld~~R~~~~la~~l~v~~~~v~~~v~G-~hg~----------~~~vp~~s~------------ 215 (340)
++. +|+.|+||+|+... .+...+|+.+|+++++++..+.| ||.. ++.+|.+-.
T Consensus 154 ~~~---~~~~kviGlC~~~~-~~~~~la~~lg~~~~~v~~~~~GlNH~~w~~~~~~~~G~D~~p~l~e~~~~~~~~~~~~ 229 (437)
T cd05298 154 RRL---FPNARILNICDMPI-AIMDSMAAILGLDRKDLEPDYFGLNHFGWFTKIYDKQGEDLLPKLREHVKENGYLPPDS 229 (437)
T ss_pred HHH---CCCCCEEEECCcHH-HHHHHHHHHhCCCHHHceEEEEeecchhhhhheEECCCCchHHHHHHHHhccCCCcccc
Confidence 444 67889999998775 47889999999999999999888 2221 234443210
Q ss_pred --C---C-------------------CCCC-----C-ChH--------------HHHHHHHHHhcchhh-----hhhhhc
Q 019519 216 --A---T-------------------PKAN-----L-ADE--------------DIKALTKRTQDGGTE-----VVEAKA 246 (340)
Q Consensus 216 --~---~-------------------v~~~-----~-~~~--------------~~~~l~~~v~~~~~~-----i~~~~~ 246 (340)
. . +.++ + .++ .+++..++..+...+ -.+..+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~y~~yy~~~~~~~~~~~~~~~~~~e~~~~~~~~l~~~~~~~~~~~~~~~~~ 309 (437)
T cd05298 230 DEEHRDPSWNDTFANAKDMMADFPDYLPNTYLQYYLYPDYMVEHSNPNYTRANEVMDGREKRVFEECRKIIETGTAEGST 309 (437)
T ss_pred cccccccCchHHHHHHhhHHHhCCCcCCCchhhHhCChHHHHHHhccccccHHHHHHHHHHHHHHHHhhhhhcCChhhhh
Confidence 0 0 0000 0 111 011111111000000 000000
Q ss_pred CCCCccchHHHHHHHHHHHHHcCCCCCCcEEEeee-eeCCC---CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHH
Q 019519 247 GKGSATLSMAYAGAIFADACLKGLNGVPDVVECSF-VQSTV---TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEK 322 (340)
Q Consensus 247 ~kg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~~-~~g~~---~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~ 322 (340)
..+ .. .|.+++++++||++|.+ .++++++ ++|.| |+|+++|+||+||++|+.++ .+++||+...++++.
T Consensus 310 ~~~-~~--ya~~a~~ii~aI~~d~~---~~~~vnv~n~G~i~nL~~d~~vevP~~v~~~Gi~pi-~vg~lP~~~~~l~~~ 382 (437)
T cd05298 310 FHV-DV--HGEYIVDLAASIAYNTK---ERFLVIVENNGAIPNLPDDAMVEVPAYIGSNGPEPL-VVGKIPTFYKGLMEQ 382 (437)
T ss_pred hhc-cc--hHHHHHHHHHHHHcCCC---eEEEEEeecCCccCCCCCCcEEEEEEEEeCCCceec-ccCCCCHHHHHHHHH
Confidence 011 11 35889999999999864 4677764 77876 78999999999999999997 667999999998776
Q ss_pred HHHHHHHHHHHH
Q 019519 323 LKPELKASIEKG 334 (340)
Q Consensus 323 s~~~l~~~~~~~ 334 (340)
-...-+-.++.+
T Consensus 383 ~~~~e~l~veAa 394 (437)
T cd05298 383 QVAYEKLLVEAY 394 (437)
T ss_pred HHHHHHHHHHHH
Confidence 554444444443
No 42
>COG1486 CelF Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=99.96 E-value=4.2e-28 Score=233.38 Aligned_cols=292 Identities=17% Similarity=0.192 Sum_probs=193.0
Q ss_pred CCCCeEEEEcCCCChHHHH--HHHHHhCC--CcceEEEEeCCC-cHHH----HHHHhc-CCCCceEEEEecCCccccccC
Q 019519 26 VPDRKVAVLGAAGGIGQPL--ALLMKLNP--LVSRLALYDIAN-TPGV----AADVGH-INTRSEVAGYMGNDQLGQALE 95 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~--a~~l~~~~--~~~el~L~D~~~-~~~~----~~dl~~-~~~~~~v~~~~~~~d~~~al~ 95 (340)
|++.||+|||| |+++..- ...|.+.+ ..+||+|+|+++ .... +..+.+ ...+.++.. ++|+++||+
T Consensus 1 m~~~KI~iIGg-GSt~tp~~v~g~l~~~e~l~~~el~L~Did~~r~~~i~~~~~~~v~~~g~~~kv~~---ttd~~eAl~ 76 (442)
T COG1486 1 MKKFKIVIIGG-GSTYTPKLLLGDLARTEELPVRELALYDIDEERLKIIAILAKKLVEEAGAPVKVEA---TTDRREALE 76 (442)
T ss_pred CCcceEEEECC-CccccHHHHHHHHhcCccCCcceEEEEeCCHHHHHHHHHHHHHHHHhhCCCeEEEE---ecCHHHHhc
Confidence 45689999998 8655433 22333433 357999999997 2222 222322 223334444 478999999
Q ss_pred CCCEEEEcCC------------CCCCCCC---C-----HHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHH
Q 019519 96 DSDVVIIPAG------------VPRKPGM---T-----RDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIA 155 (340)
Q Consensus 96 ~aDiVi~~ag------------~~~~~g~---~-----r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~ 155 (340)
|||||+.+.. +|.|+|. + ......|+++++.+|++.|+++||+||++++|||+.++|+++
T Consensus 77 gAdfVi~~~rvG~l~~r~~De~IplkyG~~gqET~G~GGi~~glRtIpvildi~~~m~~~~P~Aw~lNytNP~~~vTeAv 156 (442)
T COG1486 77 GADFVITQIRVGGLEAREKDERIPLKHGLYGQETNGPGGIFYGLRTIPVILDIAKDMEKVCPNAWMLNYTNPAAIVTEAV 156 (442)
T ss_pred CCCEEEEEEeeCCcccchhhhccchhhCccccccccccHHHhhcccchHHHHHHHHHHHhCCCceEEeccChHHHHHHHH
Confidence 9999999642 3666652 2 455668999999999999999999999999999999999986
Q ss_pred HHHHHHhCCCCCCceEeccchhHHHHHHHHHHHcCCCC-CCCceeEEE-ecCC---------Ccccccccc---------
Q 019519 156 AEVFKKAGTYNEKKLFGVTTLDVVRAKTFYAGKANVNV-AEVNVPVVG-GHAG---------ITILPLFSQ--------- 215 (340)
Q Consensus 156 ~~~~~~sg~~~~~kviG~~~ld~~R~~~~la~~l~v~~-~~v~~~v~G-~hg~---------~~~vp~~s~--------- 215 (340)
.++ +|..|++|+|+... -....+|+.||+++ ++++..+.| +|.. .+.+|.+..
T Consensus 157 ---~r~---~~~~K~VGlCh~~~-g~~~~lAe~L~~~~~~~l~~~~aGlNH~~w~~~~~~~G~d~~p~l~~~~~~~~~~~ 229 (442)
T COG1486 157 ---RRL---YPKIKIVGLCHGPI-GIAMELAEVLGLEPREDLRYRVAGLNHMVWILRVRDDGEDLYPELLEALEEGGSPS 229 (442)
T ss_pred ---HHh---CCCCcEEeeCCchH-HHHHHHHHHhCCCchhceeEEEeechhhhhhhHhhhcCccchHHHHHHHhccccCC
Confidence 554 45349999998765 47899999999975 999999888 3322 122221111
Q ss_pred --------------CC----CC---CC------C-----------------ChHHHHHHHHHH----hc-chhhhhhhhc
Q 019519 216 --------------AT----PK---AN------L-----------------ADEDIKALTKRT----QD-GGTEVVEAKA 246 (340)
Q Consensus 216 --------------~~----v~---~~------~-----------------~~~~~~~l~~~v----~~-~~~~i~~~~~ 246 (340)
.. +. ++ + ..+++.+..+.. .+ .-.+..+...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ra~ev~~re~~~~~~~~~~~~~~~p~~~~ 309 (442)
T COG1486 230 EPENKNIQSPVWIDMFLKYGYPVLPSSYHRYYYYPYDMKEKKPDEIEKFGTRANEVMKREKELFELYKKPELKEKPEELE 309 (442)
T ss_pred ccccccccCcchHHHHHHhCcCcccCcchhhheehHhhhhccchhhhhcCCCHHHHHHHHHHHHHHHhhhhhhcCchhhh
Confidence 00 00 00 0 011111111100 00 0000000011
Q ss_pred CCCCc--cchHHHHHHHHHHHHHcCCCCCCcEEEeee-eeCCC---CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHH
Q 019519 247 GKGSA--TLSMAYAGAIFADACLKGLNGVPDVVECSF-VQSTV---TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGL 320 (340)
Q Consensus 247 ~kg~~--~~s~A~a~~~li~ai~~~~~~~~~v~~~~~-~~g~~---~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l 320 (340)
.++.+ .++ .++++++.||++|++. ++.+.+ ++|.+ |+|.++++||+++++|++++. .|+||+..++++
T Consensus 310 ~~~~~~~~~~--e~a~~ii~Ai~~~~~~---~~~vNv~N~G~I~nlp~D~vVEvpc~Vd~~Gi~P~~-~g~lP~~~~~l~ 383 (442)
T COG1486 310 KRIGAGKYSS--EYASNIINAIENNKPS---RIYVNVRNNGAITNLPDDAVVEVPCLVDRNGIHPLA-VGDLPEFVKGLM 383 (442)
T ss_pred hcCCcccccH--HHHHHHHHHHhcCCce---EEEEEcCCCccccCCCCCeEEEeeEEecCCCCcccc-cCCCCHHHHHHH
Confidence 22333 566 7799999999999763 454554 78875 899999999999999999964 579999999999
Q ss_pred HHHHHHHHHHHHHH
Q 019519 321 EKLKPELKASIEKG 334 (340)
Q Consensus 321 ~~s~~~l~~~~~~~ 334 (340)
+.....-+-.++.+
T Consensus 384 ~~~i~~e~l~veA~ 397 (442)
T COG1486 384 HTNINVEELTVEAA 397 (442)
T ss_pred HHHHHHHHHHHHHH
Confidence 88766555555544
No 43
>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases. linked to 3D####ucture
Probab=99.96 E-value=3.8e-27 Score=231.63 Aligned_cols=286 Identities=17% Similarity=0.143 Sum_probs=194.7
Q ss_pred CeEEEEcCCCChHHHHHH--HHHhC-CC-cceEEEEeCCC--cHHHHHHHhcC----CCCceEEEEecCCccccccCCCC
Q 019519 29 RKVAVLGAAGGIGQPLAL--LMKLN-PL-VSRLALYDIAN--TPGVAADVGHI----NTRSEVAGYMGNDQLGQALEDSD 98 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~--~l~~~-~~-~~el~L~D~~~--~~~~~~dl~~~----~~~~~v~~~~~~~d~~~al~~aD 98 (340)
+||+|||| |.+|++.+. .++.. .. ..+|+|+|+++ .+....++.+. ....++.. ++|++++++|||
T Consensus 1 ~KIaIIGa-Gs~G~a~a~~~~i~~~~~~~g~eV~L~Did~e~l~~~~~~~~~~~~~~~~~~~I~~---ttD~~eal~~AD 76 (423)
T cd05297 1 IKIAFIGA-GSVVFTKNLVGDLLKTPELSGSTIALMDIDEERLETVEILAKKIVEELGAPLKIEA---TTDRREALDGAD 76 (423)
T ss_pred CeEEEECC-ChHHhHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHhcCCCeEEEE---eCCHHHHhcCCC
Confidence 58999998 999998776 45433 33 34999999987 34444444332 12335554 368889999999
Q ss_pred EEEEcCCCCCCCCCCH----------------------HHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHH
Q 019519 99 VVIIPAGVPRKPGMTR----------------------DDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAA 156 (340)
Q Consensus 99 iVi~~ag~~~~~g~~r----------------------~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~ 156 (340)
+||++++.+..++.++ .....+|++++.++++.++++||++|++++|||++++|+++
T Consensus 77 ~Vi~ai~~~~~~~~~~de~i~~K~g~~~~~~~t~g~ggi~~~~~s~~~i~~ia~~i~~~~p~a~~i~~tNPv~i~t~~~- 155 (423)
T cd05297 77 FVINTIQVGGHEYTETDFEIPEKYGYYQTVGDTSGPGGIFRALRTIPVLLDIARDIEELCPDAWLLNYANPMAELTWAL- 155 (423)
T ss_pred EEEEeeEecCccchhhhhhhHHHcCeeeeccCCCcHHHHHHHHhhHHHHHHHHHHHHHHCCCCEEEEcCChHHHHHHHH-
Confidence 9999987544333332 56678999999999999999999999999999999999987
Q ss_pred HHHHHhCCCCCCceEeccchhHHHHHHHHHHHcCCCCCCCceeEEE-ecCC---------Ccccccccc-----------
Q 019519 157 EVFKKAGTYNEKKLFGVTTLDVVRAKTFYAGKANVNVAEVNVPVVG-GHAG---------ITILPLFSQ----------- 215 (340)
Q Consensus 157 ~~~~~sg~~~~~kviG~~~ld~~R~~~~la~~l~v~~~~v~~~v~G-~hg~---------~~~vp~~s~----------- 215 (340)
++.++ .|++|+|+. +.++++.+|+.+++++++|+++++| ||.. ++.+|.+-.
T Consensus 156 --~k~~~----~rviG~c~~-~~~~~~~~a~~l~~~~~~v~~~~~GlNH~~w~~~~~~~G~d~~p~l~~~~~~~~~~~~~ 228 (423)
T cd05297 156 --NRYTP----IKTVGLCHG-VQGTAEQLAKLLGEPPEEVDYQVAGINHMAWLLKFEYNGEDLYPLLDEWIEEGSEEWDQ 228 (423)
T ss_pred --HHhCC----CCEEEECCc-HHHHHHHHHHHhCCCHHHeEEEEEeeccHhhhhhheECCcchHHHHHHHHhccCccchh
Confidence 56554 799999865 6789999999999999999999999 3322 244443111
Q ss_pred CC-CC-------C-----------C------CChHHHHH------------------HHHHHhcchhhhhhh--hcCCCC
Q 019519 216 AT-PK-------A-----------N------LADEDIKA------------------LTKRTQDGGTEVVEA--KAGKGS 250 (340)
Q Consensus 216 ~~-v~-------~-----------~------~~~~~~~~------------------l~~~v~~~~~~i~~~--~~~kg~ 250 (340)
.. +. + + ..++.... +....... ...+. ....+.
T Consensus 229 ~~~~~~~~~~~~g~~p~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 306 (423)
T cd05297 229 LSPVRFDMYRRYGLFPTESSEHLSEYVPHYRKETKKIWYGEFNEDEYGGRDEEQGWEWYEERLKL--ILAEIDKEELDPV 306 (423)
T ss_pred cccchHHHHHHcCCcccCcchhhhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHhhhhh--ccchhcchhcccc
Confidence 10 00 0 0 00011111 11111000 00000 000122
Q ss_pred ccchHHHHHHHHHHHHHcCCCCCCcEEEeee-eeCCC---CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHHHHHH
Q 019519 251 ATLSMAYAGAIFADACLKGLNGVPDVVECSF-VQSTV---TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEKLKPE 326 (340)
Q Consensus 251 ~~~s~A~a~~~li~ai~~~~~~~~~v~~~~~-~~g~~---~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~ 326 (340)
..++ ..++++++||++|++ .++.+++ ++|.+ |+|.++++||+|+++|+.++ .+++|++...++++.-...
T Consensus 307 ~~~~--e~a~~ii~ai~~~~~---~~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~p~-~~g~lp~~~~~l~~~~~~~ 380 (423)
T cd05297 307 KRSG--EYASPIIEALVTGKP---RRINGNVPNNGLIPNLPDDVVVEVPALVDRNGIHPE-KIGPLPPQLAALIRPRINV 380 (423)
T ss_pred ccch--HHHHHHHHHHhcCCc---eEEEEECCCCCCCCCCCCCcEEEEeeEEcCCCceec-ccCCCCHHHHHHHHHHHHH
Confidence 2334 778999999998865 3444554 77875 89999999999999999997 6679999999988775544
Q ss_pred HHHHHHHH
Q 019519 327 LKASIEKG 334 (340)
Q Consensus 327 l~~~~~~~ 334 (340)
-+-.++.+
T Consensus 381 e~l~veA~ 388 (423)
T cd05297 381 QELAVEAA 388 (423)
T ss_pred HHHHHHHH
Confidence 44444443
No 44
>PF02056 Glyco_hydro_4: Family 4 glycosyl hydrolase; InterPro: IPR001088 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 4 GH4 from CAZY comprises enzymes with several known activities; 6-phospho-beta-glucosidase (3.2.1.86 from EC); 6-phospho-alpha-glucosidase (3.2.1.122 from EC); alpha-galactosidase (3.2.1.22 from EC). 6-phospho-alpha-glucosidase requires both NAD(H) and divalent metal (Mn2+, Fe2+, Co2+, or Ni2+) for activity [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1U8X_X 1S6Y_A 3FEF_B 1VJT_A 1UP4_A 1UP6_C 1UP7_E 1OBB_A.
Probab=99.87 E-value=3.2e-21 Score=167.39 Aligned_cols=151 Identities=21% Similarity=0.208 Sum_probs=108.3
Q ss_pred eEEEEcCCCChHHHH--HHHHHhCCC--cceEEEEeCCC-c----HHHHHHHhc-CCCCceEEEEecCCccccccCCCCE
Q 019519 30 KVAVLGAAGGIGQPL--ALLMKLNPL--VSRLALYDIAN-T----PGVAADVGH-INTRSEVAGYMGNDQLGQALEDSDV 99 (340)
Q Consensus 30 KI~IiGaaG~VG~~~--a~~l~~~~~--~~el~L~D~~~-~----~~~~~dl~~-~~~~~~v~~~~~~~d~~~al~~aDi 99 (340)
||+|||| |++-... ...+...+. .+||+|+|+++ . ...+..+.. ...+.+++.+ +|+++|++||||
T Consensus 1 KI~iIGa-GS~~~~~~l~~~l~~~~~l~~~ei~L~Did~~RL~~~~~~~~~~~~~~~~~~~v~~t---td~~eAl~gADf 76 (183)
T PF02056_consen 1 KITIIGA-GSTYFPLLLLGDLLRTEELSGSEIVLMDIDEERLEIVERLARRMVEEAGADLKVEAT---TDRREALEGADF 76 (183)
T ss_dssp EEEEETT-TSCCHHHHHHHHHHCTTTSTEEEEEEE-SCHHHHHHHHHHHHHHHHHCTTSSEEEEE---SSHHHHHTTESE
T ss_pred CEEEECC-chHhhHHHHHHHHhcCccCCCcEEEEEcCCHHHHHHHHHHHHHHHHhcCCCeEEEEe---CCHHHHhCCCCE
Confidence 8999998 8765543 224444442 46999999997 2 122333322 2234566653 789999999999
Q ss_pred EEEcCC------------CCCCCCCC----------HHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHH
Q 019519 100 VIIPAG------------VPRKPGMT----------RDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAE 157 (340)
Q Consensus 100 Vi~~ag------------~~~~~g~~----------r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~ 157 (340)
||++.. .|.++|.. ......|+++++.++++.|+++|||||+||+|||+..+|+++
T Consensus 77 Vi~~irvGg~~~r~~De~Ip~k~Gi~~~~~eT~G~GG~~~alRtipv~~~ia~~i~~~~PdAw~iNytNP~~~vt~a~-- 154 (183)
T PF02056_consen 77 VINQIRVGGLEAREIDEEIPLKYGIVGTIQETVGPGGFFRALRTIPVMLDIARDIEELCPDAWLINYTNPMGIVTEAL-- 154 (183)
T ss_dssp EEE---TTHHHHHHHHHHTGGCCTTT-BTTSSSTHHHHHHHHHHHHHHHHHHHHHHHHTTTSEEEE-SSSHHHHHHHH--
T ss_pred EEEEeeecchHHHHHHHHHHHHhCCccccccccCccHHHHHHhhHHHHHHHHHHHHHhCCCcEEEeccChHHHHHHHH--
Confidence 999754 36666532 467788999999999999999999999999999999999987
Q ss_pred HHHHhCCCCCCceEeccchhHHHHHHHHHHHcCC
Q 019519 158 VFKKAGTYNEKKLFGVTTLDVVRAKTFYAGKANV 191 (340)
Q Consensus 158 ~~~~sg~~~~~kviG~~~ld~~R~~~~la~~l~v 191 (340)
.+. +|..|++|+|+... -+...+|+.||+
T Consensus 155 -~r~---~~~~k~vGlCh~~~-~~~~~la~~L~~ 183 (183)
T PF02056_consen 155 -SRY---TPKIKVVGLCHGPQ-GTRRQLAKLLGM 183 (183)
T ss_dssp -HHH---STTSEEEEE-SHHH-HHHHHHHHHHT-
T ss_pred -HHh---CCCCCEEEECCCHH-HHHHHHHHHhCc
Confidence 455 45589999998765 478889998874
No 45
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=98.86 E-value=1e-08 Score=89.71 Aligned_cols=117 Identities=23% Similarity=0.366 Sum_probs=79.7
Q ss_pred eEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--c---HHHHHH-Hh----cCC--------CCceEEEEecCCccc
Q 019519 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--T---PGVAAD-VG----HIN--------TRSEVAGYMGNDQLG 91 (340)
Q Consensus 30 KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~---~~~~~d-l~----~~~--------~~~~v~~~~~~~d~~ 91 (340)
||+|+|| |.+|..++..++..|+ +++|+|.++ . .....+ +. ... ...++... +|++
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~--~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~---~dl~ 74 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGY--EVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISFT---TDLE 74 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTS--EEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEEE---SSGG
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCC--cEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcccc---cCHH
Confidence 7999998 9999999999999998 999999986 1 111111 11 111 12356654 5776
Q ss_pred cccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecCCCCc-cHHHHHHHHHHhCCCCCCc
Q 019519 92 QALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNS-TVPIAAEVFKKAGTYNEKK 169 (340)
Q Consensus 92 ~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~-~t~~~~~~~~~sg~~~~~k 169 (340)
++. +||+||.+. .++.++.+++...+++++ |++++ .||.... ++.++ ... -.|+|
T Consensus 75 ~~~-~adlViEai--------------~E~l~~K~~~~~~l~~~~~~~~il--asnTSsl~i~~la----~~~--~~p~R 131 (180)
T PF02737_consen 75 EAV-DADLVIEAI--------------PEDLELKQELFAELDEICPPDTIL--ASNTSSLSISELA----AAL--SRPER 131 (180)
T ss_dssp GGC-TESEEEE-S---------------SSHHHHHHHHHHHHCCS-TTSEE--EE--SSS-HHHHH----TTS--STGGG
T ss_pred HHh-hhheehhhc--------------cccHHHHHHHHHHHHHHhCCCceE--EecCCCCCHHHHH----hcc--CcCce
Confidence 655 999999996 478999999999999999 57755 8888774 55443 222 35778
Q ss_pred eEeccc
Q 019519 170 LFGVTT 175 (340)
Q Consensus 170 viG~~~ 175 (340)
++|++.
T Consensus 132 ~ig~Hf 137 (180)
T PF02737_consen 132 FIGMHF 137 (180)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 888864
No 46
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=98.82 E-value=2.9e-08 Score=93.22 Aligned_cols=119 Identities=24% Similarity=0.353 Sum_probs=87.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--c-HHH--HH----HHhcCC---------CCceEEEEecCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--T-PGV--AA----DVGHIN---------TRSEVAGYMGND 88 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~-~~~--~~----dl~~~~---------~~~~v~~~~~~~ 88 (340)
..+||+|||| |.+|+.+|+.++..++ +|+|+|+++ . .+. .. .+.... ...+++. ++
T Consensus 2 ~i~kv~ViGa-G~MG~gIA~~~A~~G~--~V~l~D~~~~~~~~~~~~i~~~l~k~~~~g~l~~~~~~~~l~~i~~---~~ 75 (307)
T COG1250 2 EIKKVAVIGA-GVMGAGIAAVFALAGY--DVVLKDISPEALERALAYIEKNLEKLVEKGKLTEEEADAALARITP---TT 75 (307)
T ss_pred CccEEEEEcc-cchhHHHHHHHhhcCC--ceEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHhhccc---cC
Confidence 3569999998 9999999999998777 999999985 1 111 11 111111 1224443 34
Q ss_pred ccccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecCCCCc-cHHHHHHHHHHhCCCC
Q 019519 89 QLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNS-TVPIAAEVFKKAGTYN 166 (340)
Q Consensus 89 d~~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~-~t~~~~~~~~~sg~~~ 166 (340)
|+ .++++||+||.++ .+|.++.+++..++++++ |++++ .||.+.+ ++.+++ .+ -.
T Consensus 76 ~~-~~l~~~DlVIEAv--------------~E~levK~~vf~~l~~~~~~~aIl--ASNTSsl~it~ia~----~~--~r 132 (307)
T COG1250 76 DL-AALKDADLVIEAV--------------VEDLELKKQVFAELEALAKPDAIL--ASNTSSLSITELAE----AL--KR 132 (307)
T ss_pred ch-hHhccCCEEEEec--------------cccHHHHHHHHHHHHhhcCCCcEE--eeccCCCCHHHHHH----Hh--CC
Confidence 54 5899999999996 589999999999999999 68865 9999984 666542 22 45
Q ss_pred CCceEecc
Q 019519 167 EKKLFGVT 174 (340)
Q Consensus 167 ~~kviG~~ 174 (340)
|+|++|++
T Consensus 133 per~iG~H 140 (307)
T COG1250 133 PERFIGLH 140 (307)
T ss_pred chhEEEEe
Confidence 78999996
No 47
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=98.75 E-value=9e-08 Score=91.58 Aligned_cols=115 Identities=19% Similarity=0.243 Sum_probs=83.9
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHH-------------HH-hcCCCCceEEEEecCCcccccc
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAA-------------DV-GHINTRSEVAGYMGNDQLGQAL 94 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~-------------dl-~~~~~~~~v~~~~~~~d~~~al 94 (340)
|||+|+|. |.||...+..|++.|+ +|+++|+++.+-..+ +| .+.....++..+ +|+++|+
T Consensus 1 MkI~viGt-GYVGLv~g~~lA~~GH--eVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fT---td~~~a~ 74 (414)
T COG1004 1 MKITVIGT-GYVGLVTGACLAELGH--EVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFT---TDYEEAV 74 (414)
T ss_pred CceEEECC-chHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEE---cCHHHHH
Confidence 79999997 9999999999999998 999999987221111 12 111223457764 6889999
Q ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEe--cCCCCccHHHH
Q 019519 95 EDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI--SNPVNSTVPIA 155 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~--tNP~d~~t~~~ 155 (340)
+++|+++++.|.|.++.- ..++..+...++.|.++.+...+|+. |-|++....+-
T Consensus 75 ~~adv~fIavgTP~~~dg------~aDl~~V~ava~~i~~~~~~~~vvV~KSTVPvGt~~~v~ 131 (414)
T COG1004 75 KDADVVFIAVGTPPDEDG------SADLSYVEAVAKDIGEILDGKAVVVIKSTVPVGTTEEVR 131 (414)
T ss_pred hcCCEEEEEcCCCCCCCC------CccHHHHHHHHHHHHhhcCCCeEEEEcCCCCCCchHHHH
Confidence 999999999999876632 24567788888888888765344443 77887766554
No 48
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.68 E-value=1.2e-07 Score=90.18 Aligned_cols=119 Identities=14% Similarity=0.142 Sum_probs=84.5
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC-cHHH-----H--H-HHhcCC-----CCceEEEEecCCcccccc
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-TPGV-----A--A-DVGHIN-----TRSEVAGYMGNDQLGQAL 94 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~-~~~~-----~--~-dl~~~~-----~~~~v~~~~~~~d~~~al 94 (340)
.||+|||+ |.+|+.++..++..|+ +|+|+|+++ .... . + .+.... ...+++.. +++++++
T Consensus 8 ~~VaVIGa-G~MG~giA~~~a~aG~--~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~---~~l~~av 81 (321)
T PRK07066 8 KTFAAIGS-GVIGSGWVARALAHGL--DVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFV---ATIEACV 81 (321)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceec---CCHHHHh
Confidence 59999998 9999999999999998 999999985 1111 0 0 111110 12345542 5677889
Q ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec
Q 019519 95 EDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCP-NAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV 173 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~ 173 (340)
++||+|+.++ .+|.++.+++...+.+++| ++ |+.||.+.+...-+ .... -.|+|++|+
T Consensus 82 ~~aDlViEav--------------pE~l~vK~~lf~~l~~~~~~~a--IlaSnTS~l~~s~l---a~~~--~~p~R~~g~ 140 (321)
T PRK07066 82 ADADFIQESA--------------PEREALKLELHERISRAAKPDA--IIASSTSGLLPTDF---YARA--THPERCVVG 140 (321)
T ss_pred cCCCEEEECC--------------cCCHHHHHHHHHHHHHhCCCCe--EEEECCCccCHHHH---HHhc--CCcccEEEE
Confidence 9999999985 4788999999999999996 55 44899887543322 2222 346789998
Q ss_pred c
Q 019519 174 T 174 (340)
Q Consensus 174 ~ 174 (340)
+
T Consensus 141 H 141 (321)
T PRK07066 141 H 141 (321)
T ss_pred e
Confidence 5
No 49
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.62 E-value=3.1e-07 Score=86.20 Aligned_cols=120 Identities=22% Similarity=0.380 Sum_probs=80.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc-HHHHHH----Hh-----cCCC---------CceEEEEecC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT-PGVAAD----VG-----HINT---------RSEVAGYMGN 87 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~-~~~~~d----l~-----~~~~---------~~~v~~~~~~ 87 (340)
..+||+|||+ |.+|+.+|..++..++ +|+++|.++. ...+.+ +. .... ..++..+
T Consensus 2 ~~~kIaViGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--- 75 (287)
T PRK08293 2 DIKNVTVAGA-GVLGSQIAFQTAFHGF--DVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLT--- 75 (287)
T ss_pred CccEEEEECC-CHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEe---
Confidence 3469999998 9999999999998887 9999999861 111110 10 0000 1245443
Q ss_pred CccccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEecCCCCcc-HHHHHHHHHHhCCC
Q 019519 88 DQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCP-NAIVNMISNPVNST-VPIAAEVFKKAGTY 165 (340)
Q Consensus 88 ~d~~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNP~d~~-t~~~~~~~~~sg~~ 165 (340)
+|+++++++||+||++. ..+.+..+++.+.+.++++ ++++ ++|.+... +.+ .+...
T Consensus 76 ~d~~~a~~~aDlVieav--------------pe~~~~k~~~~~~l~~~~~~~~ii--~sntSt~~~~~~----~~~~~-- 133 (287)
T PRK08293 76 TDLAEAVKDADLVIEAV--------------PEDPEIKGDFYEELAKVAPEKTIF--ATNSSTLLPSQF----AEATG-- 133 (287)
T ss_pred CCHHHHhcCCCEEEEec--------------cCCHHHHHHHHHHHHhhCCCCCEE--EECcccCCHHHH----HhhcC--
Confidence 56777899999999985 2457788888888888875 5533 67777643 333 23332
Q ss_pred CCCceEecc
Q 019519 166 NEKKLFGVT 174 (340)
Q Consensus 166 ~~~kviG~~ 174 (340)
.+.|++|++
T Consensus 134 ~~~r~vg~H 142 (287)
T PRK08293 134 RPEKFLALH 142 (287)
T ss_pred CcccEEEEc
Confidence 356888875
No 50
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.62 E-value=6.2e-07 Score=84.17 Aligned_cols=122 Identities=13% Similarity=0.217 Sum_probs=84.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HH-H--H---HH-HhcCC---------CCceEEEEecCCc
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PG-V--A---AD-VGHIN---------TRSEVAGYMGNDQ 89 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~-~--~---~d-l~~~~---------~~~~v~~~~~~~d 89 (340)
+.||+|||+ |.+|..+|..++..|+ +|+|+|.++. .. . . ++ +.+.. ...+++.. +|
T Consensus 5 ~~~V~ViGa-G~mG~~iA~~~a~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~---~~ 78 (286)
T PRK07819 5 IQRVGVVGA-GQMGAGIAEVCARAGV--DVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFT---TD 78 (286)
T ss_pred ccEEEEEcc-cHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEee---CC
Confidence 349999998 9999999999999998 9999999861 11 1 0 01 11111 11345543 56
Q ss_pred cccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-C-CcEEEEecCCCCccHHHHHHHHHHhCCCCC
Q 019519 90 LGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-P-NAIVNMISNPVNSTVPIAAEVFKKAGTYNE 167 (340)
Q Consensus 90 ~~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p-~a~viv~tNP~d~~t~~~~~~~~~sg~~~~ 167 (340)
+ +++++||+||.+. .++.++.+++...++++| + ++++ +||....-...+ .... -.+
T Consensus 79 ~-~~~~~~d~ViEav--------------~E~~~~K~~l~~~l~~~~~~~~~il--~snTS~~~~~~l---a~~~--~~~ 136 (286)
T PRK07819 79 L-GDFADRQLVIEAV--------------VEDEAVKTEIFAELDKVVTDPDAVL--ASNTSSIPIMKL---AAAT--KRP 136 (286)
T ss_pred H-HHhCCCCEEEEec--------------ccCHHHHHHHHHHHHHhhCCCCcEE--EECCCCCCHHHH---Hhhc--CCC
Confidence 6 6799999999996 478899999999999997 4 5544 888877443332 1223 346
Q ss_pred CceEeccchh
Q 019519 168 KKLFGVTTLD 177 (340)
Q Consensus 168 ~kviG~~~ld 177 (340)
+|++|++..+
T Consensus 137 ~r~~g~hf~~ 146 (286)
T PRK07819 137 GRVLGLHFFN 146 (286)
T ss_pred ccEEEEecCC
Confidence 7899886433
No 51
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=98.60 E-value=3.5e-07 Score=95.92 Aligned_cols=119 Identities=19% Similarity=0.236 Sum_probs=87.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC-c--HHH--HHH----H-hcCC--------CCceEEEEecCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-T--PGV--AAD----V-GHIN--------TRSEVAGYMGND 88 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~-~--~~~--~~d----l-~~~~--------~~~~v~~~~~~~ 88 (340)
+..||+|||| |.+|..+|..++..|+ +|+|+|.++ . .+. ..+ + .+.. ...+++.+ +
T Consensus 312 ~i~~v~ViGa-G~mG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~---~ 385 (714)
T TIGR02437 312 DVKQAAVLGA-GIMGGGIAYQSASKGT--PIVMKDINQHSLDLGLTEAAKLLNKQVERGRITPAKMAGVLNGITPT---L 385 (714)
T ss_pred ccceEEEECC-chHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEEe---C
Confidence 3469999998 9999999999999998 999999986 1 111 111 1 1110 12356653 5
Q ss_pred ccccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEecCCCCc-cHHHHHHHHHHhCCCC
Q 019519 89 QLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCP-NAIVNMISNPVNS-TVPIAAEVFKKAGTYN 166 (340)
Q Consensus 89 d~~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNP~d~-~t~~~~~~~~~sg~~~ 166 (340)
|+ +++++||+||.++ .+++++.+++..+++++|| ++++ .||.+.+ ++.++ ... -.
T Consensus 386 ~~-~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~~il--asnTS~l~i~~ia----~~~--~~ 442 (714)
T TIGR02437 386 SY-AGFDNVDIVVEAV--------------VENPKVKAAVLAEVEQHVREDAIL--ASNTSTISISLLA----KAL--KR 442 (714)
T ss_pred CH-HHhcCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCCcEE--EECCCCCCHHHHH----hhc--CC
Confidence 65 7799999999996 4789999999999999994 6654 9999884 55554 233 35
Q ss_pred CCceEecc
Q 019519 167 EKKLFGVT 174 (340)
Q Consensus 167 ~~kviG~~ 174 (340)
|+|++|++
T Consensus 443 p~r~ig~H 450 (714)
T TIGR02437 443 PENFCGMH 450 (714)
T ss_pred cccEEEEe
Confidence 78999996
No 52
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=98.59 E-value=5.7e-07 Score=94.48 Aligned_cols=119 Identities=22% Similarity=0.251 Sum_probs=87.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC-c--HHH--HH----HHh-cCC--------CCceEEEEecCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-T--PGV--AA----DVG-HIN--------TRSEVAGYMGND 88 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~-~--~~~--~~----dl~-~~~--------~~~~v~~~~~~~ 88 (340)
+..||+|||| |.+|..+|..++..|+ +|+|+|+++ . .+. .. .+. +.. ...+++.+ +
T Consensus 312 ~i~~v~ViGa-G~mG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~~---~ 385 (715)
T PRK11730 312 PVKQAAVLGA-GIMGGGIAYQSASKGV--PVIMKDINQKALDLGMTEAAKLLNKQVERGKIDGAKMAGVLSSIRPT---L 385 (715)
T ss_pred ccceEEEECC-chhHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEEe---C
Confidence 3469999998 9999999999999998 999999986 1 111 11 111 110 12356653 5
Q ss_pred ccccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEecCCCCc-cHHHHHHHHHHhCCCC
Q 019519 89 QLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCP-NAIVNMISNPVNS-TVPIAAEVFKKAGTYN 166 (340)
Q Consensus 89 d~~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNP~d~-~t~~~~~~~~~sg~~~ 166 (340)
|+ +++++||+||.++ .+++++.+++..++++++| ++++ .||.+.+ ++.++ ... -.
T Consensus 386 ~~-~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~~il--asNTSsl~i~~la----~~~--~~ 442 (715)
T PRK11730 386 DY-AGFERVDVVVEAV--------------VENPKVKAAVLAEVEQKVREDTIL--ASNTSTISISLLA----KAL--KR 442 (715)
T ss_pred CH-HHhcCCCEEEecc--------------cCcHHHHHHHHHHHHhhCCCCcEE--EEcCCCCCHHHHH----hhc--CC
Confidence 65 7799999999996 4789999999999999995 6644 9999884 56654 233 34
Q ss_pred CCceEecc
Q 019519 167 EKKLFGVT 174 (340)
Q Consensus 167 ~~kviG~~ 174 (340)
|+|++|++
T Consensus 443 p~r~~g~H 450 (715)
T PRK11730 443 PENFCGMH 450 (715)
T ss_pred CccEEEEe
Confidence 67999985
No 53
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=98.58 E-value=3.4e-07 Score=96.30 Aligned_cols=119 Identities=21% Similarity=0.271 Sum_probs=87.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC-c--HHH--HHH-H----hcCC--------CCceEEEEecCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-T--PGV--AAD-V----GHIN--------TRSEVAGYMGND 88 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~-~--~~~--~~d-l----~~~~--------~~~~v~~~~~~~ 88 (340)
+..||+|||| |.+|+.++..++..|+ +|+|+|+++ . ++. ..+ + .... ...+++.+ +
T Consensus 334 ~i~~v~ViGa-G~MG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~---~ 407 (737)
T TIGR02441 334 PVKTLAVLGA-GLMGAGIAQVSVDKGL--KTVLKDATPAGLDRGQQQVFKGLNKKVKRKKITSLERDSILSNLTPT---L 407 (737)
T ss_pred cccEEEEECC-CHhHHHHHHHHHhCCC--cEEEecCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEe---C
Confidence 3469999998 9999999999999998 999999986 1 111 111 1 1110 12356653 5
Q ss_pred ccccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEecCCCCc-cHHHHHHHHHHhCCCC
Q 019519 89 QLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCP-NAIVNMISNPVNS-TVPIAAEVFKKAGTYN 166 (340)
Q Consensus 89 d~~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNP~d~-~t~~~~~~~~~sg~~~ 166 (340)
|+ +++++||+||.++ .+|.++.+++..++++++| ++++ .||.+.+ ++.++ ... -.
T Consensus 408 ~~-~~~~~aDlViEAv--------------~E~l~~K~~vf~~l~~~~~~~~il--asNTSsl~i~~la----~~~--~~ 464 (737)
T TIGR02441 408 DY-SGFKNADMVIEAV--------------FEDLSLKHKVIKEVEAVVPPHCII--ASNTSALPIKDIA----AVS--SR 464 (737)
T ss_pred CH-HHhccCCeehhhc--------------cccHHHHHHHHHHHHhhCCCCcEE--EEcCCCCCHHHHH----hhc--CC
Confidence 65 6799999999986 5899999999999999995 6654 8999884 55554 233 34
Q ss_pred CCceEecc
Q 019519 167 EKKLFGVT 174 (340)
Q Consensus 167 ~~kviG~~ 174 (340)
|+|++|++
T Consensus 465 p~r~ig~H 472 (737)
T TIGR02441 465 PEKVIGMH 472 (737)
T ss_pred ccceEEEe
Confidence 68999985
No 54
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=98.58 E-value=4.7e-07 Score=95.05 Aligned_cols=118 Identities=22% Similarity=0.333 Sum_probs=86.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHH-hCCCcceEEEEeCCC-c--HH--HHHHH-----hcCC--------CCceEEEEecCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMK-LNPLVSRLALYDIAN-T--PG--VAADV-----GHIN--------TRSEVAGYMGND 88 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~-~~~~~~el~L~D~~~-~--~~--~~~dl-----~~~~--------~~~~v~~~~~~~ 88 (340)
..||+|||| |.+|..+|..++ ..|+ +|+|+|.++ . .+ ...+. .+.. ...+|+.+ +
T Consensus 309 i~~v~ViGa-G~mG~giA~~~a~~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~---~ 382 (708)
T PRK11154 309 VNKVGVLGG-GLMGGGIAYVTATKAGL--PVRIKDINPQGINHALKYSWDLLDKKVKRRHLKPSERDKQMALISGT---T 382 (708)
T ss_pred ccEEEEECC-chhhHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhcEEEe---C
Confidence 469999998 999999999988 7788 999999976 1 11 11111 1110 12356654 5
Q ss_pred ccccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecCCCCc-cHHHHHHHHHHhCCCC
Q 019519 89 QLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNS-TVPIAAEVFKKAGTYN 166 (340)
Q Consensus 89 d~~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~-~t~~~~~~~~~sg~~~ 166 (340)
|+ ++++|||+||.++ .+|.++.+++..++++++ |++++ .||.+.+ ++.++ ... -.
T Consensus 383 ~~-~~~~~aDlViEav--------------~E~~~~K~~v~~~le~~~~~~~il--asnTS~l~i~~la----~~~--~~ 439 (708)
T PRK11154 383 DY-RGFKHADVVIEAV--------------FEDLALKQQMVAEVEQNCAPHTIF--ASNTSSLPIGQIA----AAA--AR 439 (708)
T ss_pred Ch-HHhccCCEEeecc--------------cccHHHHHHHHHHHHhhCCCCcEE--EECCCCCCHHHHH----Hhc--Cc
Confidence 65 7899999999996 589999999999999999 57754 8999884 55554 233 34
Q ss_pred CCceEecc
Q 019519 167 EKKLFGVT 174 (340)
Q Consensus 167 ~~kviG~~ 174 (340)
|+|++|++
T Consensus 440 p~r~ig~H 447 (708)
T PRK11154 440 PEQVIGLH 447 (708)
T ss_pred ccceEEEe
Confidence 67999986
No 55
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=98.55 E-value=7e-07 Score=93.55 Aligned_cols=119 Identities=20% Similarity=0.297 Sum_probs=86.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHH-hCCCcceEEEEeCCC-c--HHH--HH-HHh----cCC--------CCceEEEEecC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMK-LNPLVSRLALYDIAN-T--PGV--AA-DVG----HIN--------TRSEVAGYMGN 87 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~-~~~~~~el~L~D~~~-~--~~~--~~-dl~----~~~--------~~~~v~~~~~~ 87 (340)
+..||+|||| |.+|+.+|..++ ..|+ +|+|+|+++ . .+. .. .+. ... ...+|+..
T Consensus 303 ~i~~v~ViGa-G~mG~~iA~~~a~~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~--- 376 (699)
T TIGR02440 303 KIKKVGILGG-GLMGGGIASVTATKAGI--PVRIKDINPQGINNALKYAWKLLDKGVKRRHMTPAERDNQMALITGT--- 376 (699)
T ss_pred cccEEEEECC-cHHHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHcCeEEe---
Confidence 3469999998 999999999888 4788 999999986 1 111 11 111 110 12356653
Q ss_pred CccccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEecCCCC-ccHHHHHHHHHHhCCC
Q 019519 88 DQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCP-NAIVNMISNPVN-STVPIAAEVFKKAGTY 165 (340)
Q Consensus 88 ~d~~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNP~d-~~t~~~~~~~~~sg~~ 165 (340)
+|+ ++++|||+||.++ .+++++.+++..+++++++ ++++ .||.+. .++.++ ... -
T Consensus 377 ~~~-~~~~~adlViEav--------------~E~l~~K~~v~~~l~~~~~~~~il--asnTS~l~i~~la----~~~--~ 433 (699)
T TIGR02440 377 TDY-RGFKDVDIVIEAV--------------FEDLALKHQMVKDIEQECAAHTIF--ASNTSSLPIGQIA----AAA--S 433 (699)
T ss_pred CCh-HHhccCCEEEEec--------------cccHHHHHHHHHHHHhhCCCCcEE--EeCCCCCCHHHHH----Hhc--C
Confidence 565 6799999999986 4789999999999999995 6644 899988 466554 222 3
Q ss_pred CCCceEecc
Q 019519 166 NEKKLFGVT 174 (340)
Q Consensus 166 ~~~kviG~~ 174 (340)
.|+|++|++
T Consensus 434 ~p~r~~g~H 442 (699)
T TIGR02440 434 RPENVIGLH 442 (699)
T ss_pred CcccEEEEe
Confidence 567999986
No 56
>KOG2304 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=98.55 E-value=3.6e-08 Score=87.24 Aligned_cols=122 Identities=20% Similarity=0.330 Sum_probs=89.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC-c-----HHHHHHHhcCC-----------------CCceEEE
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-T-----PGVAADVGHIN-----------------TRSEVAG 83 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~-~-----~~~~~dl~~~~-----------------~~~~v~~ 83 (340)
++..|+|+|| |.+|+.+|+..+..++ .++|+|.++ . ++....+.+.. ...+++.
T Consensus 10 ~~~~V~ivGa-G~MGSGIAQv~a~sg~--~V~l~d~~~~aL~~A~~~I~~sl~rvakKk~~~~~~~~~e~v~~~l~ri~~ 86 (298)
T KOG2304|consen 10 EIKNVAIVGA-GQMGSGIAQVAATSGL--NVWLVDANEDALSRATKAISSSLKRVAKKKKADDPVALEEFVDDTLDRIKT 86 (298)
T ss_pred cccceEEEcc-cccchhHHHHHHhcCC--ceEEecCCHHHHHHHHHHHHHHHHHHHhhcccCChhhHHHHHHHHHHHHHH
Confidence 3468999998 9999999999999998 999999987 1 23333332211 0123333
Q ss_pred EecCCccccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCC-ccHHHHHHHHHHh
Q 019519 84 YMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVN-STVPIAAEVFKKA 162 (340)
Q Consensus 84 ~~~~~d~~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d-~~t~~~~~~~~~s 162 (340)
++|...++.|||+||.++ .+|+.+.+++.+.+++.|+..-+ ..||... .++.++. ..
T Consensus 87 ---~tnv~~~v~dadliiEAi--------------vEn~diK~~lF~~l~~~ak~~~i-l~tNTSSl~lt~ia~----~~ 144 (298)
T KOG2304|consen 87 ---STNVSDAVSDADLIIEAI--------------VENLDIKRKLFKDLDKIAKSSTI-LATNTSSLSLTDIAS----AT 144 (298)
T ss_pred ---cCCHHHhhhhhHHHHHHH--------------HHhHHHHHHHHHHHHhhcccceE-EeecccceeHHHHHh----hc
Confidence 367788899999998874 68999999999999999964333 3899987 4666642 11
Q ss_pred CCCCCCceEeccc
Q 019519 163 GTYNEKKLFGVTT 175 (340)
Q Consensus 163 g~~~~~kviG~~~ 175 (340)
-+|.+|.|++.
T Consensus 145 --~~~srf~GlHF 155 (298)
T KOG2304|consen 145 --QRPSRFAGLHF 155 (298)
T ss_pred --cChhhhceeec
Confidence 46789999963
No 57
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=98.52 E-value=1.6e-06 Score=86.11 Aligned_cols=119 Identities=13% Similarity=0.011 Sum_probs=79.5
Q ss_pred CCCCCCCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEE
Q 019519 21 YSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVV 100 (340)
Q Consensus 21 ~~~~~~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiV 100 (340)
|.....+.|||.|+||+||||++++..|+..++ +|+.+|.... +....+.+.....+++.... +-+..++.++|+|
T Consensus 113 ~~~~~~~~mkILVTGatGFIGs~Lv~~Ll~~G~--~V~~ldr~~~-~~~~~~~~~~~~~~~~~~~~-Di~~~~~~~~D~V 188 (436)
T PLN02166 113 PVGIGRKRLRIVVTGGAGFVGSHLVDKLIGRGD--EVIVIDNFFT-GRKENLVHLFGNPRFELIRH-DVVEPILLEVDQI 188 (436)
T ss_pred CcccccCCCEEEEECCccHHHHHHHHHHHHCCC--EEEEEeCCCC-ccHhHhhhhccCCceEEEEC-ccccccccCCCEE
Confidence 445556679999999999999999999998887 9999997531 00011111111123333221 1223457899999
Q ss_pred EEcCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 101 IIPAGVPR--KPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 101 i~~ag~~~--~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
|++|+... ....+..+++..|+....++++.+++.+. .+|.+|
T Consensus 189 iHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~--r~V~~S 233 (436)
T PLN02166 189 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--RFLLTS 233 (436)
T ss_pred EECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC--EEEEEC
Confidence 99997532 22235667888999999999999998753 555553
No 58
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.49 E-value=2e-06 Score=80.49 Aligned_cols=119 Identities=21% Similarity=0.371 Sum_probs=80.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc---HHH-----H-HHHhcCC---------CCceEEEEecCCc
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PGV-----A-ADVGHIN---------TRSEVAGYMGNDQ 89 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~---~~~-----~-~dl~~~~---------~~~~v~~~~~~~d 89 (340)
+.||+|||+ |.+|..++..++..++ +|+++|+++. .+. . .++.+.. ...++... +|
T Consensus 3 ~~kI~VIG~-G~mG~~ia~~la~~g~--~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~~~---~~ 76 (282)
T PRK05808 3 IQKIGVIGA-GTMGNGIAQVCAVAGY--DVVMVDISDAAVDRGLATITKSLDRLVKKGKMTEADKEAALARITGT---TD 76 (282)
T ss_pred ccEEEEEcc-CHHHHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEe---CC
Confidence 459999998 9999999999998887 9999999862 111 0 1111111 01245443 45
Q ss_pred cccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEecCCCCccHHHHHHHHHHhCCCCCC
Q 019519 90 LGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCP-NAIVNMISNPVNSTVPIAAEVFKKAGTYNEK 168 (340)
Q Consensus 90 ~~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~ 168 (340)
+ +++++||+||+++ ..+..+.+++.+.+.++++ ++++ .||-.++-...+ ....+ .+.
T Consensus 77 ~-~~~~~aDlVi~av--------------~e~~~~k~~~~~~l~~~~~~~~il--~s~ts~~~~~~l---a~~~~--~~~ 134 (282)
T PRK05808 77 L-DDLKDADLVIEAA--------------TENMDLKKKIFAQLDEIAKPEAIL--ATNTSSLSITEL---AAATK--RPD 134 (282)
T ss_pred H-HHhccCCeeeecc--------------cccHHHHHHHHHHHHhhCCCCcEE--EECCCCCCHHHH---HHhhC--CCc
Confidence 5 5689999999996 3567778888889998885 5544 787777543333 23332 346
Q ss_pred ceEecc
Q 019519 169 KLFGVT 174 (340)
Q Consensus 169 kviG~~ 174 (340)
+++|+.
T Consensus 135 r~ig~h 140 (282)
T PRK05808 135 KVIGMH 140 (282)
T ss_pred ceEEee
Confidence 888875
No 59
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=98.45 E-value=9.1e-07 Score=77.75 Aligned_cols=121 Identities=21% Similarity=0.306 Sum_probs=71.1
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcC----------------CCCceEEEEecCCcccc
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHI----------------NTRSEVAGYMGNDQLGQ 92 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~----------------~~~~~v~~~~~~~d~~~ 92 (340)
|||+|+|. |+||..+|..|+..|+ +++-+|+++.+ ...+... ....++..+ +|.++
T Consensus 1 M~I~ViGl-GyvGl~~A~~lA~~G~--~V~g~D~~~~~--v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t---~~~~~ 72 (185)
T PF03721_consen 1 MKIAVIGL-GYVGLPLAAALAEKGH--QVIGVDIDEEK--VEALNNGELPIYEPGLDELLKENVSAGRLRAT---TDIEE 72 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTS--EEEEE-S-HHH--HHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEE---SEHHH
T ss_pred CEEEEECC-CcchHHHHHHHHhCCC--EEEEEeCChHH--HHHHhhccccccccchhhhhccccccccchhh---hhhhh
Confidence 79999997 9999999999999998 99999998621 1112211 013467764 57778
Q ss_pred ccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEE-ecCCCCccHHHHHHHHHHhC
Q 019519 93 ALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNM-ISNPVNSTVPIAAEVFKKAG 163 (340)
Q Consensus 93 al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv-~tNP~d~~t~~~~~~~~~sg 163 (340)
++++||++|++.+.|...+.+ -+...+...++.|.++. ++.++++ .|=|.+..-.++..+++..+
T Consensus 73 ai~~adv~~I~VpTP~~~~~~------~Dls~v~~a~~~i~~~l~~~~lvV~~STvppGtt~~~~~~ile~~~ 139 (185)
T PF03721_consen 73 AIKDADVVFICVPTPSDEDGS------PDLSYVESAIESIAPVLRPGDLVVIESTVPPGTTEELLKPILEKRS 139 (185)
T ss_dssp HHHH-SEEEE----EBETTTS------BETHHHHHHHHHHHHHHCSCEEEEESSSSSTTHHHHHHHHHHHHHC
T ss_pred hhhccceEEEecCCCccccCC------ccHHHHHHHHHHHHHHHhhcceEEEccEEEEeeehHhhhhhhhhhc
Confidence 899999999999888655331 23444555555565554 3444333 36677766644444445444
No 60
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=98.43 E-value=1.3e-06 Score=81.71 Aligned_cols=117 Identities=17% Similarity=0.242 Sum_probs=80.1
Q ss_pred EEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEE-ecCCccccccCCCCEEEEcCCCCCCC
Q 019519 32 AVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGY-MGNDQLGQALEDSDVVIIPAGVPRKP 110 (340)
Q Consensus 32 ~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~-~~~~d~~~al~~aDiVi~~ag~~~~~ 110 (340)
.|+||+||+|++++..|+..+...+|..+|+........++........+... +...++.++++++|+||++|+.....
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~ 80 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW 80 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence 38999999999999999998866699999987622221122222211012221 12356778999999999998753333
Q ss_pred C-CCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCc
Q 019519 111 G-MTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNS 150 (340)
Q Consensus 111 g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~ 150 (340)
+ .....+...|+...+.+.+...+..-+. +++|..+++
T Consensus 81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~Vkr--lVytSS~~v 119 (280)
T PF01073_consen 81 GDYPPEEYYKVNVDGTRNVLEAARKAGVKR--LVYTSSISV 119 (280)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHcCCCE--EEEEcCcce
Confidence 3 4567788999999999999999875443 445555543
No 61
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=98.42 E-value=2.7e-06 Score=79.92 Aligned_cols=119 Identities=14% Similarity=0.250 Sum_probs=78.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc-HHHHH-H-------Hh---cCCC---------CceEEEEec
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT-PGVAA-D-------VG---HINT---------RSEVAGYMG 86 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~-~~~~~-d-------l~---~~~~---------~~~v~~~~~ 86 (340)
..||+|||+ |.+|..++..++..++ +|+++|.++. ...+. . +. +... ..++...
T Consensus 3 i~~I~ViGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~l~~~~~~i~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~~-- 77 (291)
T PRK06035 3 IKVIGVVGS-GVMGQGIAQVFARTGY--DVTIVDVSEEILKNAMELIESGPYGLRNLVEKGKMSEDEAKAIMARIRTS-- 77 (291)
T ss_pred CcEEEEECc-cHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHhhhhhHHHHHHcCCCCHHHHHHHHhCcEee--
Confidence 459999998 9999999999999887 9999999861 11110 1 11 1110 1134332
Q ss_pred CCccccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEecCCCCcc-HHHHHHHHHHhCC
Q 019519 87 NDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCP-NAIVNMISNPVNST-VPIAAEVFKKAGT 164 (340)
Q Consensus 87 ~~d~~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNP~d~~-t~~~~~~~~~sg~ 164 (340)
+|+ +++++||+||.+. ..+.++.+++.+.++++++ ++++ +||...+. +.++ ...
T Consensus 78 -~~~-~~~~~aDlVieav--------------~e~~~~k~~~~~~l~~~~~~~~il--~S~tsg~~~~~la----~~~-- 133 (291)
T PRK06035 78 -TSY-ESLSDADFIVEAV--------------PEKLDLKRKVFAELERNVSPETII--ASNTSGIMIAEIA----TAL-- 133 (291)
T ss_pred -CCH-HHhCCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCCeEE--EEcCCCCCHHHHH----hhc--
Confidence 455 6789999999986 2456677888888888875 5544 57766643 3332 222
Q ss_pred CCCCceEeccc
Q 019519 165 YNEKKLFGVTT 175 (340)
Q Consensus 165 ~~~~kviG~~~ 175 (340)
-.+.|++|+..
T Consensus 134 ~~~~r~ig~hf 144 (291)
T PRK06035 134 ERKDRFIGMHW 144 (291)
T ss_pred CCcccEEEEec
Confidence 23678888853
No 62
>PLN02206 UDP-glucuronate decarboxylase
Probab=98.37 E-value=5.2e-06 Score=82.64 Aligned_cols=121 Identities=13% Similarity=0.005 Sum_probs=79.7
Q ss_pred ccCCCCCCCCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEecCCccccccC
Q 019519 18 ARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYMGNDQLGQALE 95 (340)
Q Consensus 18 ~~~~~~~~~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~ 95 (340)
...|+....+.|||.|+||+|+||++++..|+..++ +|+.+|... ....... +.. ..+++.... +-+..++.
T Consensus 109 ~~~~~~~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~--~V~~ld~~~~~~~~~~~~--~~~-~~~~~~i~~-D~~~~~l~ 182 (442)
T PLN02206 109 GKIPLGLKRKGLRVVVTGGAGFVGSHLVDRLMARGD--SVIVVDNFFTGRKENVMH--HFS-NPNFELIRH-DVVEPILL 182 (442)
T ss_pred CcCccccccCCCEEEEECcccHHHHHHHHHHHHCcC--EEEEEeCCCccchhhhhh--hcc-CCceEEEEC-CccChhhc
Confidence 334555555678999999999999999999999887 899988643 1111111 111 122333221 11235578
Q ss_pred CCCEEEEcCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecC
Q 019519 96 DSDVVIIPAGVPR--KPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 96 ~aDiVi~~ag~~~--~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN 146 (340)
++|+||++|+... .........+..|+....++++.+++.. ..+|++|.
T Consensus 183 ~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g--~r~V~~SS 233 (442)
T PLN02206 183 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLLTST 233 (442)
T ss_pred CCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC--CEEEEECC
Confidence 9999999997542 1223456778899999999999998775 35555543
No 63
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=98.33 E-value=4.8e-07 Score=84.38 Aligned_cols=114 Identities=19% Similarity=0.232 Sum_probs=71.8
Q ss_pred EEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEE----EEec----CCccccccC--CCC
Q 019519 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVA----GYMG----NDQLGQALE--DSD 98 (340)
Q Consensus 31 I~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~----~~~~----~~d~~~al~--~aD 98 (340)
|.|+||+|++|+.++..|+..++ .+|+++|.++ ......++.......++. ...+ ...+..+++ +.|
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p-~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pd 79 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP-KKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPD 79 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB--SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-S
T ss_pred CEEEccccHHHHHHHHHHHhcCC-CeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCC
Confidence 68999999999999999998764 5899999998 334444553111111121 1111 112345667 999
Q ss_pred EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 99 VVIIPAGVPRKP--GMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 99 iVi~~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
+|+++|....-+ .....+.+..|+-..+++++...+++.+-.|.+.|
T Consensus 80 iVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~IST 128 (293)
T PF02719_consen 80 IVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFIST 128 (293)
T ss_dssp EEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEE
T ss_pred EEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccc
Confidence 999999764433 23567788999999999999999998776666654
No 64
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.31 E-value=1e-05 Score=75.97 Aligned_cols=122 Identities=20% Similarity=0.352 Sum_probs=76.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHH----HHh----cCCC--------CceEEEEecCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAA----DVG----HINT--------RSEVAGYMGND 88 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~----dl~----~~~~--------~~~v~~~~~~~ 88 (340)
+.+||+|||+ |.+|..++..++..++ +|+++|.++. ..... .+. .... ..+++.. +
T Consensus 3 ~~~kI~vIGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~---~ 76 (292)
T PRK07530 3 AIKKVGVIGA-GQMGNGIAHVCALAGY--DVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARISTA---T 76 (292)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEee---C
Confidence 3469999998 9999999999999887 9999999861 11111 111 1110 1234442 4
Q ss_pred ccccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecCCCCcc-HHHHHHHHHHhCCCC
Q 019519 89 QLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNST-VPIAAEVFKKAGTYN 166 (340)
Q Consensus 89 d~~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~-t~~~~~~~~~sg~~~ 166 (340)
|+ +++++||+||++. | .+..+.+.+.+.+.+++ |++++ +||.+.+- +.+. +.. ..
T Consensus 77 ~~-~~~~~aD~Vieav--p------------e~~~~k~~~~~~l~~~~~~~~ii--~s~ts~~~~s~la----~~~--~~ 133 (292)
T PRK07530 77 DL-EDLADCDLVIEAA--T------------EDETVKRKIFAQLCPVLKPEAIL--ATNTSSISITRLA----SAT--DR 133 (292)
T ss_pred CH-HHhcCCCEEEEcC--c------------CCHHHHHHHHHHHHhhCCCCcEE--EEcCCCCCHHHHH----hhc--CC
Confidence 55 5689999999985 2 33455556666777777 46654 46766643 3332 222 23
Q ss_pred CCceEeccchh
Q 019519 167 EKKLFGVTTLD 177 (340)
Q Consensus 167 ~~kviG~~~ld 177 (340)
+.+++|+..++
T Consensus 134 ~~r~~g~h~~~ 144 (292)
T PRK07530 134 PERFIGIHFMN 144 (292)
T ss_pred cccEEEeeccC
Confidence 56788875443
No 65
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=98.30 E-value=1.6e-06 Score=74.07 Aligned_cols=93 Identities=27% Similarity=0.401 Sum_probs=63.7
Q ss_pred eEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCC--------CCceEEEEecCCccccccCCCCEEE
Q 019519 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHIN--------TRSEVAGYMGNDQLGQALEDSDVVI 101 (340)
Q Consensus 30 KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~--------~~~~v~~~~~~~d~~~al~~aDiVi 101 (340)
||+|+|| |..|.++|..|...+. +|.|++.++.....+.-.+.. .+..+..+ +|+++++++||+||
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g~--~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t---~dl~~a~~~ad~Ii 74 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNGH--EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKAT---TDLEEALEDADIII 74 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCTE--EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEE---SSHHHHHTT-SEEE
T ss_pred CEEEECc-CHHHHHHHHHHHHcCC--EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccc---cCHHHHhCcccEEE
Confidence 8999998 9999999999999997 999999875222222222221 12345543 68889999999999
Q ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEe
Q 019519 102 IPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCP-NAIVNMI 144 (340)
Q Consensus 102 ~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~ 144 (340)
++. | ....+++++.+..+-+ +..++++
T Consensus 75 iav--P--------------s~~~~~~~~~l~~~l~~~~~ii~~ 102 (157)
T PF01210_consen 75 IAV--P--------------SQAHREVLEQLAPYLKKGQIIISA 102 (157)
T ss_dssp E-S-----------------GGGHHHHHHHHTTTSHTT-EEEET
T ss_pred ecc--c--------------HHHHHHHHHHHhhccCCCCEEEEe
Confidence 984 2 4556788888888774 4455443
No 66
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=98.29 E-value=6.8e-06 Score=82.94 Aligned_cols=122 Identities=24% Similarity=0.340 Sum_probs=83.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc---HHH---H---HHHhcCC---------CCceEEEEecCCc
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PGV---A---ADVGHIN---------TRSEVAGYMGNDQ 89 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~---~~~---~---~dl~~~~---------~~~~v~~~~~~~d 89 (340)
..||+|||+ |.+|+.+|..++..|+ +|+++|+++. .+. . ..+.... ...+++.. +|
T Consensus 5 ~~kV~VIGa-G~MG~gIA~~la~aG~--~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~---~~ 78 (503)
T TIGR02279 5 VVTVAVIGA-GAMGAGIAQVAASAGH--QVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIPV---TD 78 (503)
T ss_pred ccEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEEe---CC
Confidence 459999998 9999999999999998 9999999861 110 0 0111111 11245543 46
Q ss_pred cccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCc-cHHHHHHHHHHhCCCCCC
Q 019519 90 LGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNS-TVPIAAEVFKKAGTYNEK 168 (340)
Q Consensus 90 ~~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~-~t~~~~~~~~~sg~~~~~ 168 (340)
+ +++++||+||.+. .++..+.+.+...+.++++...+ +.||.+.+ .+.++ ... -.|.
T Consensus 79 ~-~~l~~aDlVIEav--------------~E~~~vK~~vf~~l~~~~~~~~I-lasnTStl~i~~iA----~~~--~~p~ 136 (503)
T TIGR02279 79 L-HALADAGLVIEAI--------------VENLEVKKALFAQLEELCPADTI-IASNTSSLSITAIA----AGL--ARPE 136 (503)
T ss_pred H-HHhCCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCCeE-EEECCCCCCHHHHH----Hhc--Cccc
Confidence 5 5689999999985 36778888888889999864433 48888875 34343 222 2356
Q ss_pred ceEeccchh
Q 019519 169 KLFGVTTLD 177 (340)
Q Consensus 169 kviG~~~ld 177 (340)
+++|++.++
T Consensus 137 r~~G~HFf~ 145 (503)
T TIGR02279 137 RVAGLHFFN 145 (503)
T ss_pred ceEEEeccC
Confidence 888886444
No 67
>PLN02427 UDP-apiose/xylose synthase
Probab=98.29 E-value=7e-06 Score=80.02 Aligned_cols=114 Identities=14% Similarity=0.049 Sum_probs=72.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhC-CCcceEEEEeCCCcHHHHHHHhcC---CCCceEEEEe----cCCccccccCCCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIANTPGVAADVGHI---NTRSEVAGYM----GNDQLGQALEDSD 98 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~-~~~~el~L~D~~~~~~~~~dl~~~---~~~~~v~~~~----~~~d~~~al~~aD 98 (340)
++|||.|+||+||+|++++..|+.. +. +|+.+|.+.... ..+... ....+++... +..++.++++++|
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~--~V~~l~r~~~~~--~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d 88 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPH--KVLALDVYNDKI--KHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMAD 88 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCC--EEEEEecCchhh--hhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCC
Confidence 4679999999999999999999887 45 899998654211 111111 0111233321 1123456788999
Q ss_pred EEEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecC
Q 019519 99 VVIIPAGVPRK--PGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 99 iVi~~ag~~~~--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN 146 (340)
+||++|+.... ......+.+..|+.....+++..++.+ ..+|.+|.
T Consensus 89 ~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS 136 (386)
T PLN02427 89 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 136 (386)
T ss_pred EEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEee
Confidence 99999986422 112334556678888888888887665 35555553
No 68
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=98.26 E-value=8.3e-06 Score=82.46 Aligned_cols=120 Identities=20% Similarity=0.291 Sum_probs=81.5
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc---HH--HHHH----HhcCC---------CCceEEEEecCCcc
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PG--VAAD----VGHIN---------TRSEVAGYMGNDQL 90 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~---~~--~~~d----l~~~~---------~~~~v~~~~~~~d~ 90 (340)
.||+|||+ |.+|+.+|..++..|+ +|+++|.++. .+ ...+ +.... ...+++.. +++
T Consensus 8 ~~V~VIGa-G~MG~gIA~~la~aG~--~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~---~~~ 81 (507)
T PRK08268 8 ATVAVIGA-GAMGAGIAQVAAQAGH--TVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRPV---EAL 81 (507)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEe---CCH
Confidence 58999998 9999999999999998 9999999861 11 0111 11111 11245553 455
Q ss_pred ccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecCCCCc-cHHHHHHHHHHhCCCCCC
Q 019519 91 GQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNS-TVPIAAEVFKKAGTYNEK 168 (340)
Q Consensus 91 ~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~-~t~~~~~~~~~sg~~~~~ 168 (340)
+++++||+||.+. .++..+.+.+...+++.+ |++++ +||.+.+ .+.++ ... -.|+
T Consensus 82 -~~~~~aDlViEav--------------~E~~~vK~~vf~~l~~~~~~~ail--asntStl~i~~la----~~~--~~p~ 138 (507)
T PRK08268 82 -ADLADCDLVVEAI--------------VERLDVKQALFAQLEAIVSPDCIL--ATNTSSLSITAIA----AAL--KHPE 138 (507)
T ss_pred -HHhCCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCCcEE--EECCCCCCHHHHH----hhc--CCcc
Confidence 5688999999985 367788888888899998 45544 6777664 34332 222 3467
Q ss_pred ceEeccchh
Q 019519 169 KLFGVTTLD 177 (340)
Q Consensus 169 kviG~~~ld 177 (340)
|++|+..++
T Consensus 139 r~~G~hff~ 147 (507)
T PRK08268 139 RVAGLHFFN 147 (507)
T ss_pred cEEEEeecC
Confidence 888986444
No 69
>PLN00198 anthocyanidin reductase; Provisional
Probab=98.25 E-value=2.1e-05 Score=75.09 Aligned_cols=174 Identities=13% Similarity=0.076 Sum_probs=95.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC-cHHHHHHHhcCCCCceEEEEe----cCCccccccCCCCEEEE
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYM----GNDQLGQALEDSDVVII 102 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~----~~~d~~~al~~aDiVi~ 102 (340)
+++|.|+||+|++|++++..|+..++ +|++++.+. ......++.......++.... +..++.+.++++|+||+
T Consensus 9 ~~~vlItG~~GfIG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 86 (338)
T PLN00198 9 KKTACVIGGTGFLASLLIKLLLQKGY--AVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFH 86 (338)
T ss_pred CCeEEEECCchHHHHHHHHHHHHCCC--EEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEE
Confidence 46999999999999999999998887 887776554 222111121111001232222 11234566789999999
Q ss_pred cCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCc-----------cHHHH--HHHHHHhCCCCCC
Q 019519 103 PAGVPRKPGMTR-DDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNS-----------TVPIA--AEVFKKAGTYNEK 168 (340)
Q Consensus 103 ~ag~~~~~g~~r-~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~-----------~t~~~--~~~~~~sg~~~~~ 168 (340)
+|+.......+. .+++..|+.....+.+.+.+...-..+|++|.-... +.+-. ..-..... .+|.
T Consensus 87 ~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~-~~p~ 165 (338)
T PLN00198 87 VATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSE-KPPT 165 (338)
T ss_pred eCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhc-CCcc
Confidence 998532222222 346688999999999999876422344444332100 00000 00000011 2344
Q ss_pred ceEeccchhHHHHHHHHHHHcCCCCCCCc-eeEEEec
Q 019519 169 KLFGVTTLDVVRAKTFYAGKANVNVAEVN-VPVVGGH 204 (340)
Q Consensus 169 kviG~~~ld~~R~~~~la~~l~v~~~~v~-~~v~G~h 204 (340)
..+|.+.+...++...+++..|++..-++ ..+.|..
T Consensus 166 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~ 202 (338)
T PLN00198 166 WGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPS 202 (338)
T ss_pred chhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCC
Confidence 45666544444444555666676655454 2466764
No 70
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.25 E-value=2.3e-05 Score=78.37 Aligned_cols=118 Identities=18% Similarity=0.243 Sum_probs=86.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEecC----CccccccCC--CC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYMGN----DQLGQALED--SD 98 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~~----~d~~~al~~--aD 98 (340)
..+.|.|+||+|++|+.++-.++..+. .+|+++|.+| ......+|.+.....++..+.++ .-++.++++ .|
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~~~p-~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd 327 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILKFNP-KEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVD 327 (588)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHhcCC-CEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCc
Confidence 457999999999999999998887753 6999999998 33444455543212233333321 234567888 99
Q ss_pred EEEEcCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 99 VVIIPAGVPRKPGM--TRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 99 iVi~~ag~~~~~g~--~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
+|+++|...+-|-. ...+-...|+-..+++++...+++-+..+++.|
T Consensus 328 ~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iST 376 (588)
T COG1086 328 IVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLIST 376 (588)
T ss_pred eEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEec
Confidence 99999987666643 456778899999999999999888776666554
No 71
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=98.22 E-value=2.2e-05 Score=78.60 Aligned_cols=123 Identities=16% Similarity=0.166 Sum_probs=77.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHH-------------HHhcCCCCceEEEEecCCcccccc
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAA-------------DVGHINTRSEVAGYMGNDQLGQAL 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~-------------dl~~~~~~~~v~~~~~~~d~~~al 94 (340)
+|||+|+|+ |.||..++..|+..+...+++.+|+++.+-..+ ++.......++..+ +|+.+++
T Consensus 1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t---~~~~~~i 76 (473)
T PLN02353 1 MVKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFS---TDVEKHV 76 (473)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEE---cCHHHHH
Confidence 589999998 999999999999876434899999986221111 11000001134443 5667789
Q ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEe--cCCCCccHHHH
Q 019519 95 EDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI--SNPVNSTVPIA 155 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~--tNP~d~~t~~~ 155 (340)
++||++|++.+.|...+-...+ -.-++..+.+.++.|.++.+++.+|+. |-|.++.-.+.
T Consensus 77 ~~advi~I~V~TP~~~~g~~~~-~~~Dls~v~~a~~~i~~~l~~~~lVv~~STvp~Gtt~~~~ 138 (473)
T PLN02353 77 AEADIVFVSVNTPTKTRGLGAG-KAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIE 138 (473)
T ss_pred hcCCEEEEEeCCCCCCCCCcCC-CCCcHHHHHHHHHHHHhhCCCCcEEEEeCCCCCChHHHHH
Confidence 9999999999988653210000 012455567777777777654444433 77777655443
No 72
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.20 E-value=9.7e-06 Score=76.06 Aligned_cols=119 Identities=17% Similarity=0.237 Sum_probs=73.3
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHH---HHH-----hcCCC--------CceEEEEecCCcc
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVA---ADV-----GHINT--------RSEVAGYMGNDQL 90 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~---~dl-----~~~~~--------~~~v~~~~~~~d~ 90 (340)
.||+|||+ |.+|..+|..|+..++ +|+++|+++. .... .++ ..... ..++... +++
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~---~~~ 75 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGF--QTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYS---LDL 75 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEe---CcH
Confidence 48999998 9999999999998887 8999999861 1110 011 01000 1134432 466
Q ss_pred ccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEecCCCCccHHHHHHHHHHhCCCCCCc
Q 019519 91 GQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCP-NAIVNMISNPVNSTVPIAAEVFKKAGTYNEKK 169 (340)
Q Consensus 91 ~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~k 169 (340)
++++++||+||.+.. .+..+.+.+...+.++++ ++++ ++|...+-...+ .... -.+.+
T Consensus 76 ~~~~~~aD~Vi~avp--------------e~~~~k~~~~~~l~~~~~~~~il--~~~tSt~~~~~l---~~~~--~~~~r 134 (288)
T PRK09260 76 KAAVADADLVIEAVP--------------EKLELKKAVFETADAHAPAECYI--ATNTSTMSPTEI---ASFT--KRPER 134 (288)
T ss_pred HHhhcCCCEEEEecc--------------CCHHHHHHHHHHHHhhCCCCcEE--EEcCCCCCHHHH---Hhhc--CCccc
Confidence 788999999999852 334555666666777775 5543 566655322222 1222 23456
Q ss_pred eEecc
Q 019519 170 LFGVT 174 (340)
Q Consensus 170 viG~~ 174 (340)
++|+.
T Consensus 135 ~~g~h 139 (288)
T PRK09260 135 VIAMH 139 (288)
T ss_pred EEEEe
Confidence 77764
No 73
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=98.19 E-value=2e-05 Score=75.72 Aligned_cols=169 Identities=15% Similarity=0.057 Sum_probs=99.6
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHh-cC--CCCceEEEEec-C---CccccccCC
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVG-HI--NTRSEVAGYMG-N---DQLGQALED 96 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~-~~--~~~~~v~~~~~-~---~d~~~al~~ 96 (340)
.+++||.|+||+|++|++++..|+..+. +|+.+|.... .....++. .. ....++....+ - .++.+.+++
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~ 90 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQ--TVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKN 90 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCC--EEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhC
Confidence 4568999999999999999999998886 8999997541 11111111 00 00112333221 1 123445789
Q ss_pred CCEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCC------CCccHHHHHHHHHHhCCCCCC
Q 019519 97 SDVVIIPAGVPRKP--GMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNP------VNSTVPIAAEVFKKAGTYNEK 168 (340)
Q Consensus 97 aDiVi~~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP------~d~~t~~~~~~~~~sg~~~~~ 168 (340)
+|+||++|+....+ .+........|+....++.+.+++...+ .++.+|.. .+.. . ..... ..|.
T Consensus 91 ~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~-~~v~~SS~~vyg~~~~~~--~----~e~~~-~~p~ 162 (348)
T PRK15181 91 VDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVS-SFTYAASSSTYGDHPDLP--K----IEERI-GRPL 162 (348)
T ss_pred CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEeechHhhCCCCCCC--C----CCCCC-CCCC
Confidence 99999999864322 2345567889999999999999887544 34434321 1100 0 01111 2344
Q ss_pred ceEeccchhHHHHHHHHHHHcCCCCCCCce-eEEEec
Q 019519 169 KLFGVTTLDVVRAKTFYAGKANVNVAEVNV-PVVGGH 204 (340)
Q Consensus 169 kviG~~~ld~~R~~~~la~~l~v~~~~v~~-~v~G~h 204 (340)
..+|.+.+...++....++..+++...++. .++|.+
T Consensus 163 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~ 199 (348)
T PRK15181 163 SPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRR 199 (348)
T ss_pred ChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcC
Confidence 567776544444444455666777666653 467764
No 74
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=98.19 E-value=9.7e-06 Score=73.05 Aligned_cols=100 Identities=23% Similarity=0.222 Sum_probs=63.0
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcC----CCCceEEEEecCCccccccCCCCEEEE
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHI----NTRSEVAGYMGNDQLGQALEDSDVVII 102 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~----~~~~~v~~~~~~~d~~~al~~aDiVi~ 102 (340)
|||+|||++|.+|++++..|...+. +|.++|.++ ......++.+. .....+.. ++..++++++|+||+
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~--~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~----~~~~ea~~~aDvVil 74 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGN--KIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTG----ADNAEAAKRADVVIL 74 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC--EEEEEEcCHHHHHHHHHHHHhhccccCCCceEEE----eChHHHHhcCCEEEE
Confidence 6899998449999999999998886 899999875 22222222211 11112222 123578899999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCc
Q 019519 103 PAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNS 150 (340)
Q Consensus 103 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~ 150 (340)
+.- ...+.++++.+...-++.++|-++||.+.
T Consensus 75 avp----------------~~~~~~~l~~l~~~l~~~vvI~~~ngi~~ 106 (219)
T TIGR01915 75 AVP----------------WDHVLKTLESLRDELSGKLVISPVVPLAS 106 (219)
T ss_pred ECC----------------HHHHHHHHHHHHHhccCCEEEEeccCcee
Confidence 852 12223333444433344678889999864
No 75
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=98.18 E-value=1.9e-05 Score=74.66 Aligned_cols=120 Identities=14% Similarity=0.078 Sum_probs=81.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHH--HHHHHhcCCCCceEEEEe----cCCccccccCCCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPG--VAADVGHINTRSEVAGYM----GNDQLGQALEDSD 98 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~--~~~dl~~~~~~~~v~~~~----~~~d~~~al~~aD 98 (340)
..++|+|+||+|++|+.++..|+++|+ +|+=-=+++ .+. ...+|.... .++..+. ..+.+.+|+++||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY--~V~gtVR~~~~~k~~~~L~~l~~a~--~~l~l~~aDL~d~~sf~~ai~gcd 80 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY--TVRGTVRDPEDEKKTEHLRKLEGAK--ERLKLFKADLLDEGSFDKAIDGCD 80 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC--EEEEEEcCcchhhhHHHHHhcccCc--ccceEEeccccccchHHHHHhCCC
Confidence 357999999999999999999999998 554333332 222 344554332 1222221 2245678999999
Q ss_pred EEEEcCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCcc
Q 019519 99 VVIIPAGVPRKPGM-TRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNST 151 (340)
Q Consensus 99 iVi~~ag~~~~~g~-~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~ 151 (340)
.|+++|....-... .-.+++.-+++....+.+.+.+.. ...=+++|+....+
T Consensus 81 gVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~-sVkrvV~TSS~aAv 133 (327)
T KOG1502|consen 81 GVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTK-SVKRVVYTSSTAAV 133 (327)
T ss_pred EEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccC-CcceEEEeccHHHh
Confidence 99999975432222 244788899999999999999887 44445577665433
No 76
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=98.18 E-value=2.5e-05 Score=74.08 Aligned_cols=121 Identities=20% Similarity=0.271 Sum_probs=74.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcH-HHHH--------HHhcCCC---------CceEEEEecCCc
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP-GVAA--------DVGHINT---------RSEVAGYMGNDQ 89 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~-~~~~--------dl~~~~~---------~~~v~~~~~~~d 89 (340)
++||+|||+ |.+|++++..|+..|+ +|+++|.++.. .... .+..... ..+++.. +|
T Consensus 2 ~~~V~VIG~-G~mG~~iA~~la~~G~--~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~---~~ 75 (308)
T PRK06129 2 MGSVAIIGA-GLIGRAWAIVFARAGH--EVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVT---DS 75 (308)
T ss_pred CcEEEEECc-cHHHHHHHHHHHHCCC--eeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEE---Cc
Confidence 469999997 9999999999999988 99999998611 1100 1211110 1234443 56
Q ss_pred cccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCc
Q 019519 90 LGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKK 169 (340)
Q Consensus 90 ~~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~k 169 (340)
+.+++++||+|+.+. | .+....+.+...+.+.+++..++ .||.......-+ ..... .+.+
T Consensus 76 ~~~a~~~ad~Vi~av--p------------e~~~~k~~~~~~l~~~~~~~~ii-~ssts~~~~~~l---a~~~~--~~~~ 135 (308)
T PRK06129 76 LADAVADADYVQESA--P------------ENLELKRALFAELDALAPPHAIL-ASSTSALLASAF---TEHLA--GRER 135 (308)
T ss_pred HHHhhCCCCEEEECC--c------------CCHHHHHHHHHHHHHhCCCcceE-EEeCCCCCHHHH---HHhcC--Cccc
Confidence 777899999999985 2 23445555666677777654444 466654333222 22221 2456
Q ss_pred eEecc
Q 019519 170 LFGVT 174 (340)
Q Consensus 170 viG~~ 174 (340)
++|.+
T Consensus 136 ~~~~h 140 (308)
T PRK06129 136 CLVAH 140 (308)
T ss_pred EEEEe
Confidence 77765
No 77
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.17 E-value=1.7e-05 Score=75.08 Aligned_cols=120 Identities=18% Similarity=0.320 Sum_probs=72.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHh---cC--------CCCceEEEEecCCcccccc
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVG---HI--------NTRSEVAGYMGNDQLGQAL 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~---~~--------~~~~~v~~~~~~~d~~~al 94 (340)
.+||+|||+ |.+|..++..|+..++ +|+++|.++. ......+. .. ....++... +|+.+++
T Consensus 4 ~~~I~vIGa-G~mG~~iA~~l~~~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~~~~~~ 77 (311)
T PRK06130 4 IQNLAIIGA-GTMGSGIAALFARKGL--QVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRME---AGLAAAV 77 (311)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEe---CCHHHHh
Confidence 359999998 9999999999998887 8999998761 11111110 00 001123332 4566778
Q ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec
Q 019519 95 EDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCP-NAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV 173 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~ 173 (340)
++||+||++. | .......++...+..+++ ++++ +||...+-..-+ ....+ .+.+++|+
T Consensus 78 ~~aDlVi~av--~------------~~~~~~~~v~~~l~~~~~~~~ii--~s~tsg~~~~~l---~~~~~--~~~~~ig~ 136 (311)
T PRK06130 78 SGADLVIEAV--P------------EKLELKRDVFARLDGLCDPDTIF--ATNTSGLPITAI---AQAVT--RPERFVGT 136 (311)
T ss_pred ccCCEEEEec--c------------CcHHHHHHHHHHHHHhCCCCcEE--EECCCCCCHHHH---HhhcC--CcccEEEE
Confidence 9999999985 1 233455556666776664 4443 566665433222 22221 24678887
Q ss_pred c
Q 019519 174 T 174 (340)
Q Consensus 174 ~ 174 (340)
.
T Consensus 137 h 137 (311)
T PRK06130 137 H 137 (311)
T ss_pred c
Confidence 4
No 78
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=98.17 E-value=3e-05 Score=68.71 Aligned_cols=93 Identities=24% Similarity=0.334 Sum_probs=64.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcH---HHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP---GVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~---~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
||+++|+|+ |++|+.++..+...++ |+.+-..+..+ +.+..+. +.++.. ..++|.+.||+||++.
T Consensus 1 m~~~~i~Gt-GniG~alA~~~a~ag~--eV~igs~r~~~~~~a~a~~l~-----~~i~~~----~~~dA~~~aDVVvLAV 68 (211)
T COG2085 1 MMIIAIIGT-GNIGSALALRLAKAGH--EVIIGSSRGPKALAAAAAALG-----PLITGG----SNEDAAALADVVVLAV 68 (211)
T ss_pred CcEEEEecc-ChHHHHHHHHHHhCCC--eEEEecCCChhHHHHHHHhhc-----cccccC----ChHHHHhcCCEEEEec
Confidence 679999997 9999999999999998 88888666532 2222222 345543 2368999999999984
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCC
Q 019519 105 GVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPV 148 (340)
Q Consensus 105 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~ 148 (340)
| +.....+ .++++..-.+-++|-.|||.
T Consensus 69 --P----------~~a~~~v----~~~l~~~~~~KIvID~tnp~ 96 (211)
T COG2085 69 --P----------FEAIPDV----LAELRDALGGKIVIDATNPI 96 (211)
T ss_pred --c----------HHHHHhH----HHHHHHHhCCeEEEecCCCc
Confidence 4 2333444 44444433367888899995
No 79
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=98.13 E-value=2.2e-05 Score=79.29 Aligned_cols=103 Identities=15% Similarity=0.124 Sum_probs=69.6
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcH--HHHH-------HHh---cCC--CCceEEEEecCCcccccc
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAA-------DVG---HIN--TRSEVAGYMGNDQLGQAL 94 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~--~~~~-------dl~---~~~--~~~~v~~~~~~~d~~~al 94 (340)
+||+|||+ |.+|+.++..|+..|+ +|.++|.++.. .... .+. ... ...++... +|+.+++
T Consensus 5 ~kIavIG~-G~MG~~iA~~la~~G~--~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~---~~~~ea~ 78 (495)
T PRK07531 5 MKAACIGG-GVIGGGWAARFLLAGI--DVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFC---ASLAEAV 78 (495)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEee---CCHHHHh
Confidence 69999998 9999999999999988 99999998621 1100 011 000 01124432 4667889
Q ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccH
Q 019519 95 EDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTV 152 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t 152 (340)
++||+|+.+. ..+..+.+.+...+.+++++.. |+.||.+++..
T Consensus 79 ~~aD~Vieav--------------pe~~~vk~~l~~~l~~~~~~~~-iI~SsTsgi~~ 121 (495)
T PRK07531 79 AGADWIQESV--------------PERLDLKRRVLAEIDAAARPDA-LIGSSTSGFLP 121 (495)
T ss_pred cCCCEEEEcC--------------cCCHHHHHHHHHHHHhhCCCCc-EEEEcCCCCCH
Confidence 9999999985 2445666777777888876443 34788777543
No 80
>PLN02650 dihydroflavonol-4-reductase
Probab=98.13 E-value=4.9e-05 Score=73.02 Aligned_cols=115 Identities=13% Similarity=0.057 Sum_probs=73.0
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcH-HHHHHHhcC-CCCceEEEEe----cCCccccccCCCCEEEE
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP-GVAADVGHI-NTRSEVAGYM----GNDQLGQALEDSDVVII 102 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~-~~~~dl~~~-~~~~~v~~~~----~~~d~~~al~~aDiVi~ 102 (340)
++|.|+||+|++|++++..|+..++ +|++++.+... ....++... ....++.... ....+.++++++|+||+
T Consensus 6 k~iLVTGatGfIGs~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH 83 (351)
T PLN02650 6 ETVCVTGASGFIGSWLVMRLLERGY--TVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH 83 (351)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHCCC--EEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence 5999999999999999999999887 88888765411 111122111 1111222221 11234567789999999
Q ss_pred cCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 103 PAGVPRKPGMT-RDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 103 ~ag~~~~~g~~-r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
+|+........ ....+..|+.....+++.+.+.+.-..+|++|
T Consensus 84 ~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~S 127 (351)
T PLN02650 84 VATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTS 127 (351)
T ss_pred eCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEec
Confidence 98753211112 23567889999999999998765323555554
No 81
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=98.12 E-value=2.3e-05 Score=73.71 Aligned_cols=119 Identities=22% Similarity=0.307 Sum_probs=75.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcH-HHH--------HHHhcCCC---------CceEEEEecCCc
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP-GVA--------ADVGHINT---------RSEVAGYMGNDQ 89 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~-~~~--------~dl~~~~~---------~~~v~~~~~~~d 89 (340)
..||+|||+ |.+|+.++..++..++ +|+++|.++.. ... .++.+... ...+... ++
T Consensus 4 ~~~V~vIG~-G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~ 77 (295)
T PLN02545 4 IKKVGVVGA-GQMGSGIAQLAAAAGM--DVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCT---TN 77 (295)
T ss_pred cCEEEEECC-CHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEee---CC
Confidence 358999998 9999999999998887 99999987611 110 11221110 0123332 34
Q ss_pred cccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEecCCCCc-cHHHHHHHHHHhCCCCC
Q 019519 90 LGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCP-NAIVNMISNPVNS-TVPIAAEVFKKAGTYNE 167 (340)
Q Consensus 90 ~~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNP~d~-~t~~~~~~~~~sg~~~~ 167 (340)
+ +++++||+||.+. .++..+...+...+.++++ ++++ +||-..+ ++.+ .+..+ .+
T Consensus 78 ~-~~~~~aD~Vieav--------------~e~~~~k~~v~~~l~~~~~~~~il--~s~tS~i~~~~l----~~~~~--~~ 134 (295)
T PLN02545 78 L-EELRDADFIIEAI--------------VESEDLKKKLFSELDRICKPSAIL--ASNTSSISITRL----ASATQ--RP 134 (295)
T ss_pred H-HHhCCCCEEEEcC--------------ccCHHHHHHHHHHHHhhCCCCcEE--EECCCCCCHHHH----HhhcC--CC
Confidence 4 6789999999985 3456667777777887764 5543 5777664 3332 22222 34
Q ss_pred CceEeccc
Q 019519 168 KKLFGVTT 175 (340)
Q Consensus 168 ~kviG~~~ 175 (340)
.+++|++.
T Consensus 135 ~r~~g~h~ 142 (295)
T PLN02545 135 QQVIGMHF 142 (295)
T ss_pred cceEEEec
Confidence 67878743
No 82
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=98.12 E-value=4.6e-05 Score=71.92 Aligned_cols=114 Identities=13% Similarity=0.101 Sum_probs=72.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc-HHHHHHHhcCC-CCceEEEEe----cCCccccccCCCCEEE
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT-PGVAADVGHIN-TRSEVAGYM----GNDQLGQALEDSDVVI 101 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~-~~~~v~~~~----~~~d~~~al~~aDiVi 101 (340)
.+||.|+||+|++|++++..|+..|+ +|++++.+.. ......+.... ...+++... ...++.++++++|+||
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 81 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGY--TVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVF 81 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCC--EEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEE
Confidence 36999999999999999999999887 8888877652 11111221110 011222221 1133556788999999
Q ss_pred EcCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEe
Q 019519 102 IPAGVPRKPGMT-RDDLFNINAGIVKDLCSAIAKY-CPNAIVNMI 144 (340)
Q Consensus 102 ~~ag~~~~~g~~-r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~ 144 (340)
++|+........ ..+.+..|+.....+++.+.+. ... .+|++
T Consensus 82 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~-~~v~~ 125 (322)
T PLN02662 82 HTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVK-RVVVT 125 (322)
T ss_pred EeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCC-EEEEc
Confidence 999754221122 2367788999999999998876 333 44433
No 83
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=98.07 E-value=2.7e-05 Score=74.73 Aligned_cols=110 Identities=15% Similarity=0.183 Sum_probs=70.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhC-CCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecC-----CccccccCCCCEEE
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGN-----DQLGQALEDSDVVI 101 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~-~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~-----~d~~~al~~aDiVi 101 (340)
||||.|+||+|++|++++..|+.. ++ +|+.+|..... ..++... ..+...... .++.++++++|+||
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~--~V~~~~r~~~~--~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~d~Vi 73 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDW--EVYGMDMQTDR--LGDLVNH---PRMHFFEGDITINKEWIEYHVKKCDVIL 73 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCC--eEEEEeCcHHH--HHHhccC---CCeEEEeCCCCCCHHHHHHHHcCCCEEE
Confidence 479999999999999999999875 55 89999864311 1122211 123322210 11234568999999
Q ss_pred EcCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecC
Q 019519 102 IPAGVPR--KPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 102 ~~ag~~~--~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN 146 (340)
++|+... .........+..|+....++++.+++.. ..+|.+|.
T Consensus 74 H~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS 118 (347)
T PRK11908 74 PLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPST 118 (347)
T ss_pred ECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC--CeEEEEec
Confidence 9987532 2233445566778888899999888764 35555543
No 84
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=98.04 E-value=4.5e-05 Score=72.70 Aligned_cols=113 Identities=14% Similarity=0.209 Sum_probs=75.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHH--HHHHHhcCCCCceEEEEe----cCCccccccCCCCEEE
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGHINTRSEVAGYM----GNDQLGQALEDSDVVI 101 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~--~~~dl~~~~~~~~v~~~~----~~~d~~~al~~aDiVi 101 (340)
.++|.|+||+|++|++++..|+..+...+|+++|.+.... ...++.. .++.... +..++.++++++|+||
T Consensus 4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~----~~~~~v~~Dl~d~~~l~~~~~~iD~Vi 79 (324)
T TIGR03589 4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPA----PCLRFFIGDVRDKERLTRALRGVDYVV 79 (324)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCC----CcEEEEEccCCCHHHHHHHHhcCCEEE
Confidence 4689999999999999999998775334899998765221 1112211 1222221 1123456678999999
Q ss_pred EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 102 IPAGVPRKP--GMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 102 ~~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
++||....+ ..+..+.+..|+.....+.+.+.+.+.. .+|++|
T Consensus 80 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~-~iV~~S 124 (324)
T TIGR03589 80 HAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVK-RVVALS 124 (324)
T ss_pred ECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 999864322 2345677889999999999999876543 455554
No 85
>CHL00194 ycf39 Ycf39; Provisional
Probab=98.02 E-value=3.1e-05 Score=73.41 Aligned_cols=108 Identities=12% Similarity=0.006 Sum_probs=70.3
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEE-ecCCccccccCCCCEEEEcCCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGY-MGNDQLGQALEDSDVVIIPAGVP 107 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~-~~~~d~~~al~~aDiVi~~ag~~ 107 (340)
|||.|+||+|++|++++..|...++ +|+.++.+.... ..+.+... .-+... ....++.++++++|+||++++..
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~--~V~~l~R~~~~~--~~l~~~~v-~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~ 75 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGY--QVRCLVRNLRKA--SFLKEWGA-ELVYGDLSLPETLPPSFKGVTAIIDASTSR 75 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcChHHh--hhHhhcCC-EEEECCCCCHHHHHHHHCCCCEEEECCCCC
Confidence 5999999999999999999998887 899998764221 11221111 011111 11234567899999999987532
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 108 RKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 108 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
.. ...++...|......+++.+++.+-+ .+|.+|
T Consensus 76 ~~---~~~~~~~~~~~~~~~l~~aa~~~gvk-r~I~~S 109 (317)
T CHL00194 76 PS---DLYNAKQIDWDGKLALIEAAKAAKIK-RFIFFS 109 (317)
T ss_pred CC---CccchhhhhHHHHHHHHHHHHHcCCC-EEEEec
Confidence 11 12234566888888999988887655 444444
No 86
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=98.02 E-value=6.6e-05 Score=78.50 Aligned_cols=168 Identities=14% Similarity=0.092 Sum_probs=99.3
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHHhC-CCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEec-CCc----cccccCCCC
Q 019519 25 SVPDRKVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIANTPGVAADVGHINTRSEVAGYMG-NDQ----LGQALEDSD 98 (340)
Q Consensus 25 ~~~~~KI~IiGaaG~VG~~~a~~l~~~-~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~-~~d----~~~al~~aD 98 (340)
-+++|||.|+||+||+|++++..|+.. ++ +|+.+|.+..... ++... ..++...+ -.| +.++++++|
T Consensus 312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~--~V~~l~r~~~~~~--~~~~~---~~~~~~~gDl~d~~~~l~~~l~~~D 384 (660)
T PRK08125 312 AKRRTRVLILGVNGFIGNHLTERLLRDDNY--EVYGLDIGSDAIS--RFLGH---PRFHFVEGDISIHSEWIEYHIKKCD 384 (660)
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHhCCCc--EEEEEeCCchhhh--hhcCC---CceEEEeccccCcHHHHHHHhcCCC
Confidence 366789999999999999999999874 56 9999997652111 11111 12222211 111 245678999
Q ss_pred EEEEcCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCC------C-ccHHHHHHHHH-HhCCC-CC
Q 019519 99 VVIIPAGVPR--KPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPV------N-STVPIAAEVFK-KAGTY-NE 167 (340)
Q Consensus 99 iVi~~ag~~~--~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~------d-~~t~~~~~~~~-~sg~~-~~ 167 (340)
+||++|+... .......+.+..|+....++.+.++++. . .+|.+|... + .+++-. .. ..+.. ++
T Consensus 385 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~-~~V~~SS~~vyg~~~~~~~~E~~---~~~~~~p~~~p 459 (660)
T PRK08125 385 VVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-K-RIIFPSTSEVYGMCTDKYFDEDT---SNLIVGPINKQ 459 (660)
T ss_pred EEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-C-eEEEEcchhhcCCCCCCCcCccc---cccccCCCCCC
Confidence 9999988543 2233456677889999999999999875 3 454444321 1 111000 00 00001 12
Q ss_pred CceEeccchhHHHHHHHHHHHcCCCCCCCce-eEEEec
Q 019519 168 KKLFGVTTLDVVRAKTFYAGKANVNVAEVNV-PVVGGH 204 (340)
Q Consensus 168 ~kviG~~~ld~~R~~~~la~~l~v~~~~v~~-~v~G~h 204 (340)
...+|.+.+...++....++..+++..-++. .++|.+
T Consensus 460 ~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~ 497 (660)
T PRK08125 460 RWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPR 497 (660)
T ss_pred ccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCC
Confidence 2367776544455555566777776666664 366754
No 87
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.96 E-value=7.9e-05 Score=75.70 Aligned_cols=137 Identities=22% Similarity=0.214 Sum_probs=82.7
Q ss_pred hhhhhhhccCccccCCCCCC----------CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHh
Q 019519 6 LRSVKTLAKPAGARGYSSES----------VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVG 73 (340)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~----------~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~ 73 (340)
+|+.--.++.-|..+|++.. +....|.|+||+|++|+.++..|+..|+ +|++++.+.. .....++.
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~--~Vval~Rn~ekl~~l~~~l~ 125 (576)
T PLN03209 48 LRSLDIKAQASGATKFSSAAIEAIPKELDTKDEDLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSAQRAESLVQSVK 125 (576)
T ss_pred ccccchhhccccchhhhhhhhhccccccccCCCCEEEEECCCCHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhh
Confidence 44444445555555544433 2346799999999999999999998887 8999988752 22222221
Q ss_pred c-----CC--CCceEEEEe----cCCccccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEE
Q 019519 74 H-----IN--TRSEVAGYM----GNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVN 142 (340)
Q Consensus 74 ~-----~~--~~~~v~~~~----~~~d~~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~vi 142 (340)
+ .. ...++.... ...++.+++.++|+||+++|............+..|......+++.+.+.+-. .||
T Consensus 126 ~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVg-RIV 204 (576)
T PLN03209 126 QMKLDVEGTQPVEKLEIVECDLEKPDQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVN-HFI 204 (576)
T ss_pred hhccccccccccCceEEEEecCCCHHHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCC-EEE
Confidence 1 00 001222221 11244566899999999988654321222234556788888888888776543 455
Q ss_pred Eec
Q 019519 143 MIS 145 (340)
Q Consensus 143 v~t 145 (340)
++|
T Consensus 205 ~VS 207 (576)
T PLN03209 205 LVT 207 (576)
T ss_pred EEc
Confidence 454
No 88
>PLN02214 cinnamoyl-CoA reductase
Probab=97.95 E-value=0.00014 Score=69.91 Aligned_cols=110 Identities=15% Similarity=0.054 Sum_probs=73.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHH-HHHHhcCCCCceEEEEe----cCCccccccCCCCEE
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGV-AADVGHINTRSEVAGYM----GNDQLGQALEDSDVV 100 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~-~~dl~~~~~~~~v~~~~----~~~d~~~al~~aDiV 100 (340)
+++|.|+||+|++|++++..|+..++ +|+.++.+.. ... ...+... ..++.... ...++.++++++|+|
T Consensus 10 ~~~vlVTGatGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~V 85 (342)
T PLN02214 10 GKTVCVTGAGGYIASWIVKILLERGY--TVKGTVRNPDDPKNTHLRELEGG--KERLILCKADLQDYEALKAAIDGCDGV 85 (342)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCchhhhHHHHHHhhCC--CCcEEEEecCcCChHHHHHHHhcCCEE
Confidence 46899999999999999999999887 8888876542 111 1122211 11222221 123455678899999
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 101 IIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 101 i~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
|++|+... ....+.+..|+.....+.+.+.+...+ .+|++|
T Consensus 86 ih~A~~~~---~~~~~~~~~nv~gt~~ll~aa~~~~v~-r~V~~S 126 (342)
T PLN02214 86 FHTASPVT---DDPEQMVEPAVNGAKFVINAAAEAKVK-RVVITS 126 (342)
T ss_pred EEecCCCC---CCHHHHHHHHHHHHHHHHHHHHhcCCC-EEEEec
Confidence 99998542 234566788999999999999877544 344443
No 89
>PLN02572 UDP-sulfoquinovose synthase
Probab=97.93 E-value=7.6e-05 Score=74.35 Aligned_cols=175 Identities=17% Similarity=0.178 Sum_probs=97.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc---HH------------HHHHH---hcCCCCceEEEEec--
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PG------------VAADV---GHINTRSEVAGYMG-- 86 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~---~~------------~~~dl---~~~~~~~~v~~~~~-- 86 (340)
+++||.|+||+|++|++++..|+..|+ +|+++|.... .. ....+ .+.. ..+++....
T Consensus 46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~v~~v~~Dl 122 (442)
T PLN02572 46 KKKKVMVIGGDGYCGWATALHLSKRGY--EVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVS-GKEIELYVGDI 122 (442)
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeccccccccccccccccccccchHHHHHHHHHhh-CCcceEEECCC
Confidence 467999999999999999999999887 8999984320 00 00011 0000 012222211
Q ss_pred --CCccccccC--CCCEEEEcCCCCCCC-C-CCH---HHHHHHHHHHHHHHHHHHHHhCCCcEEEEec------CCCCcc
Q 019519 87 --NDQLGQALE--DSDVVIIPAGVPRKP-G-MTR---DDLFNINAGIVKDLCSAIAKYCPNAIVNMIS------NPVNST 151 (340)
Q Consensus 87 --~~d~~~al~--~aDiVi~~ag~~~~~-g-~~r---~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t------NP~d~~ 151 (340)
..++.++++ ++|+||++|+....+ . .+. ...+..|+.....+++.+++++.+..++.+| +|-..+
T Consensus 123 ~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~~~~ 202 (442)
T PLN02572 123 CDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNIDI 202 (442)
T ss_pred CCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCCCCC
Confidence 112334455 489999998653221 1 111 2345679999999999999887655555443 221111
Q ss_pred HHH-HHH--HH-HHh--CCCCCCceEeccchhHHHHHHHHHHHcCCCCCCCc-eeEEEec
Q 019519 152 VPI-AAE--VF-KKA--GTYNEKKLFGVTTLDVVRAKTFYAGKANVNVAEVN-VPVVGGH 204 (340)
Q Consensus 152 t~~-~~~--~~-~~s--g~~~~~kviG~~~ld~~R~~~~la~~l~v~~~~v~-~~v~G~h 204 (340)
.+- +.+ .. ..+ ....|...+|.+.+....+....++..|++.--++ ..++|.+
T Consensus 203 ~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~ 262 (442)
T PLN02572 203 EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVR 262 (442)
T ss_pred cccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCC
Confidence 000 000 00 000 01334567888755545556666777787765555 3467765
No 90
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=97.92 E-value=0.00015 Score=69.61 Aligned_cols=168 Identities=14% Similarity=0.089 Sum_probs=95.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEe----cCCccccccC--CCCEEE
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM----GNDQLGQALE--DSDVVI 101 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~----~~~d~~~al~--~aDiVi 101 (340)
|+||.|+||+|++|++++..|...+. ..++++|..+.......+.+.....++.... +..++.++++ ++|+||
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vi 79 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETS-DAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVM 79 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCC-CEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEE
Confidence 45999999999999999999998875 2466777543211111222111001222111 1123344555 389999
Q ss_pred EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhC-------CC-cEEEEecCCC---------CccHHHHHHHHHHh
Q 019519 102 IPAGVPRKP--GMTRDDLFNINAGIVKDLCSAIAKYC-------PN-AIVNMISNPV---------NSTVPIAAEVFKKA 162 (340)
Q Consensus 102 ~~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~-------p~-a~viv~tNP~---------d~~t~~~~~~~~~s 162 (340)
++||..... .......+..|+.....+++.+.+++ +. ..++.+|... +.++ ...
T Consensus 80 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~-------E~~ 152 (355)
T PRK10217 80 HLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFT-------ETT 152 (355)
T ss_pred ECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcC-------CCC
Confidence 999864321 12245677889999999999988652 11 2455444321 0111 011
Q ss_pred CCCCCCceEeccchhHHHHHHHHHHHcCCCCCCCc-eeEEEec
Q 019519 163 GTYNEKKLFGVTTLDVVRAKTFYAGKANVNVAEVN-VPVVGGH 204 (340)
Q Consensus 163 g~~~~~kviG~~~ld~~R~~~~la~~l~v~~~~v~-~~v~G~h 204 (340)
. ..+...+|.+.+...++...+++..+++..-++ ..++|.+
T Consensus 153 ~-~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~ 194 (355)
T PRK10217 153 P-YAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPY 194 (355)
T ss_pred C-CCCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCC
Confidence 1 334456676655555566666777777655554 3466755
No 91
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=97.91 E-value=7.6e-05 Score=70.56 Aligned_cols=104 Identities=21% Similarity=0.369 Sum_probs=72.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHh--cCC--------CCceEEEEecCCccccccCCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVG--HIN--------TRSEVAGYMGNDQLGQALEDS 97 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~--~~~--------~~~~v~~~~~~~d~~~al~~a 97 (340)
++||+|+|+ |.=|.++|..|...++ +++|+..++ ..+.++. |.. .++.+.. ++|+.+++++|
T Consensus 1 ~~kI~ViGa-GswGTALA~~la~ng~--~V~lw~r~~--~~~~~i~~~~~N~~yLp~i~lp~~l~a---t~Dl~~a~~~a 72 (329)
T COG0240 1 MMKIAVIGA-GSWGTALAKVLARNGH--EVRLWGRDE--EIVAEINETRENPKYLPGILLPPNLKA---TTDLAEALDGA 72 (329)
T ss_pred CceEEEEcC-ChHHHHHHHHHHhcCC--eeEEEecCH--HHHHHHHhcCcCccccCCccCCccccc---ccCHHHHHhcC
Confidence 479999998 9999999999999987 999999875 2222332 221 2445554 37899999999
Q ss_pred CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEec-----CCCCccHHHH
Q 019519 98 DVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMIS-----NPVNSTVPIA 155 (340)
Q Consensus 98 DiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t-----NP~d~~t~~~ 155 (340)
|+|++.. | ...++++++++..+- ++..++.+| ++...++.++
T Consensus 73 d~iv~av--P--------------s~~~r~v~~~l~~~l~~~~~iv~~sKGie~~t~~l~seii 120 (329)
T COG0240 73 DIIVIAV--P--------------SQALREVLRQLKPLLLKDAIIVSATKGLEPETGRLLSEII 120 (329)
T ss_pred CEEEEEC--C--------------hHHHHHHHHHHhhhccCCCeEEEEeccccCCCcchHHHHH
Confidence 9999984 3 355666666665443 577777664 2333455554
No 92
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.91 E-value=0.00026 Score=65.84 Aligned_cols=155 Identities=15% Similarity=0.043 Sum_probs=102.8
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC-cHHHHHHHhcCCCCceEEEEec-CCcccccc--CCCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMG-NDQLGQAL--EDSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~-~~d~~~al--~~aDiVi~~a 104 (340)
|+|.|+|++|++||+.+-.|+..|+ +++.+|... -...+.+-... ..+.+... ..-+.+.| ..-|.||+.|
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~--~vvV~DNL~~g~~~~v~~~~~---~f~~gDi~D~~~L~~vf~~~~idaViHFA 75 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGH--EVVVLDNLSNGHKIALLKLQF---KFYEGDLLDRALLTAVFEENKIDAVVHFA 75 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCC--eEEEEecCCCCCHHHhhhccC---ceEEeccccHHHHHHHHHhcCCCEEEECc
Confidence 6899999999999999999999998 999999865 12222211111 12222110 00111222 3789999988
Q ss_pred CCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEE-----ecCCCC-ccHHHHHHHHHHhCCCCCCceEeccch
Q 019519 105 GVPRKP--GMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNM-----ISNPVN-STVPIAAEVFKKAGTYNEKKLFGVTTL 176 (340)
Q Consensus 105 g~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv-----~tNP~d-~~t~~~~~~~~~sg~~~~~kviG~~~l 176 (340)
|...-. -+..+.++..|+--...+.+.|.+++.+-+|+- +.+|.. .+++ ... ..|.+-+|-+.|
T Consensus 76 a~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E-------~~~-~~p~NPYG~sKl 147 (329)
T COG1087 76 ASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISE-------TSP-LAPINPYGRSKL 147 (329)
T ss_pred cccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCC-------CCC-CCCCCcchhHHH
Confidence 754321 134678999999999999999999998766543 345544 2322 223 567889999988
Q ss_pred hHHHHHHHHHHHcCCCCCCC
Q 019519 177 DVVRAKTFYAGKANVNVAEV 196 (340)
Q Consensus 177 d~~R~~~~la~~l~v~~~~v 196 (340)
...+....+++..+....-.
T Consensus 148 m~E~iL~d~~~a~~~~~v~L 167 (329)
T COG1087 148 MSEEILRDAAKANPFKVVIL 167 (329)
T ss_pred HHHHHHHHHHHhCCCcEEEE
Confidence 88788888888777544333
No 93
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=97.89 E-value=9.9e-05 Score=69.56 Aligned_cols=112 Identities=17% Similarity=0.150 Sum_probs=73.9
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEe-cCCccccccCCCCEEEEcCCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-GNDQLGQALEDSDVVIIPAGVP 107 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~~~d~~~al~~aDiVi~~ag~~ 107 (340)
|||.|+||+|++|++++..|+..++ +|+++|.+..... ++.+... .-+.... ...++.++++++|+||++++..
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--~~~~~~~-~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~ 75 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGE--EVRVLVRPTSDRR--NLEGLDV-EIVEGDLRDPASLRKAVAGCRALFHVAADY 75 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCC--EEEEEEecCcccc--ccccCCc-eEEEeeCCCHHHHHHHHhCCCEEEEeceec
Confidence 5899999999999999999998887 8999997652111 1111111 0112111 1123456778999999998754
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecC
Q 019519 108 RKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 108 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN 146 (340)
.............|+.....+++.+.+.+-+ .+|+.|.
T Consensus 76 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS 113 (328)
T TIGR03466 76 RLWAPDPEEMYAANVEGTRNLLRAALEAGVE-RVVYTSS 113 (328)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEec
Confidence 3233445667788999999999988876533 4444443
No 94
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=97.87 E-value=0.00017 Score=69.20 Aligned_cols=117 Identities=19% Similarity=0.163 Sum_probs=72.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCccccccCC--CCEEEE
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQLGQALED--SDVVII 102 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~~~al~~--aDiVi~ 102 (340)
.++|.|+||+|++|++++..|+..+. +|+.+|.+.. ......+........+.... ...++.+.+++ .|+||+
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih 81 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLLELGA--EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFH 81 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHHHCCC--EEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEE
Confidence 46999999999999999999998887 8998987652 11111121111000111110 11223344554 599999
Q ss_pred cCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecC
Q 019519 103 PAGVPRKP--GMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 103 ~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN 146 (340)
+|+.+... .......+..|+.....+++.+.+.+....+|++|.
T Consensus 82 ~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS 127 (349)
T TIGR02622 82 LAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTS 127 (349)
T ss_pred CCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 99854221 123456678899999999999887653335665554
No 95
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=97.86 E-value=0.00035 Score=66.19 Aligned_cols=116 Identities=13% Similarity=0.078 Sum_probs=72.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcH-HHHHHHhc-CCCCceEEEEe----cCCccccccCCCCEEE
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP-GVAADVGH-INTRSEVAGYM----GNDQLGQALEDSDVVI 101 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~-~~~~dl~~-~~~~~~v~~~~----~~~d~~~al~~aDiVi 101 (340)
.++|.|+||+|++|++++..|+..++ +|++++.+... .....+.. .....++.... ...++.++++++|+||
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 82 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFRGY--TINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF 82 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCC--EEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence 36999999999999999999999887 88877765421 11111111 11111232221 1123456678899999
Q ss_pred EcCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 102 IPAGVPRKP-G-MTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 102 ~~ag~~~~~-g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
++||..... . ......+..|+.....+.+.+.++.....+|++|
T Consensus 83 h~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~S 128 (325)
T PLN02989 83 HTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTS 128 (325)
T ss_pred EeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEec
Confidence 999853211 1 1234566789999999999888754223455443
No 96
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=97.86 E-value=0.00012 Score=68.43 Aligned_cols=166 Identities=13% Similarity=0.061 Sum_probs=93.5
Q ss_pred eEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--H-HHHHHHhcCCCCceEEEEe----cCCccccccCC--CCEE
Q 019519 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--P-GVAADVGHINTRSEVAGYM----GNDQLGQALED--SDVV 100 (340)
Q Consensus 30 KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~-~~~~dl~~~~~~~~v~~~~----~~~d~~~al~~--aDiV 100 (340)
||.|+||+|++|++++..|+..+...+|+++|.... . ....++... ..+.... ...++.+++++ +|+|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~d~v 77 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDN---PRYRFVKGDIGDRELVSRLFTEHQPDAV 77 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccC---CCcEEEEcCCcCHHHHHHHHhhcCCCEE
Confidence 689999999999999998887653338888886431 1 111122211 1222221 11234456666 8999
Q ss_pred EEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCC-----CccHHHHHHHHHHhCCCCCCceEec
Q 019519 101 IIPAGVPRK--PGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPV-----NSTVPIAAEVFKKAGTYNEKKLFGV 173 (340)
Q Consensus 101 i~~ag~~~~--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~-----d~~t~~~~~~~~~sg~~~~~kviG~ 173 (340)
|++++.... .......++..|......+++.+.+...+..++.+|... ...... ..... ..+...+|.
T Consensus 78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~----~e~~~-~~~~~~Y~~ 152 (317)
T TIGR01181 78 VHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAF----TETTP-LAPSSPYSA 152 (317)
T ss_pred EEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCc----CCCCC-CCCCCchHH
Confidence 999875321 122344567889999999999998775555566554311 000000 01111 334455666
Q ss_pred cchhHHHHHHHHHHHcCCCCCCCce-eEEEe
Q 019519 174 TTLDVVRAKTFYAGKANVNVAEVNV-PVVGG 203 (340)
Q Consensus 174 ~~ld~~R~~~~la~~l~v~~~~v~~-~v~G~ 203 (340)
+.....++-..+++..+++..-++. .++|.
T Consensus 153 sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~ 183 (317)
T TIGR01181 153 SKAASDHLVRAYHRTYGLPALITRCSNNYGP 183 (317)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEeccccCC
Confidence 5443444444556666665444443 35564
No 97
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=97.85 E-value=0.00011 Score=69.83 Aligned_cols=101 Identities=21% Similarity=0.357 Sum_probs=64.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHH--HHHHHhcCC------CCceEEEEecCCccccccCCCCE
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGHIN------TRSEVAGYMGNDQLGQALEDSDV 99 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~--~~~dl~~~~------~~~~v~~~~~~~d~~~al~~aDi 99 (340)
||||+|||+ |.+|+.++..|...++ ++.++|.++... ...+..+.. ....+... ++..+++++||+
T Consensus 1 mmkI~iiG~-G~mG~~~a~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~ 74 (325)
T PRK00094 1 MMKIAVLGA-GSWGTALAIVLARNGH--DVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRAT---TDLAEALADADL 74 (325)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEe---CCHHHHHhCCCE
Confidence 579999998 9999999999998887 899999875221 111100100 01123322 355567899999
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecCCCCc
Q 019519 100 VIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNS 150 (340)
Q Consensus 100 Vi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~ 150 (340)
||++... ..+.++++.+..+. |+.+++..+|-++.
T Consensus 75 vi~~v~~----------------~~~~~v~~~l~~~~~~~~~vi~~~ngv~~ 110 (325)
T PRK00094 75 ILVAVPS----------------QALREVLKQLKPLLPPDAPIVWATKGIEP 110 (325)
T ss_pred EEEeCCH----------------HHHHHHHHHHHhhcCCCCEEEEEeecccC
Confidence 9998521 12344445555553 67788888876653
No 98
>PLN02778 3,5-epimerase/4-reductase
Probab=97.85 E-value=0.00029 Score=66.44 Aligned_cols=89 Identities=16% Similarity=0.122 Sum_probs=62.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
.|||.|+||+|++|++++..|...++ ++++...+. ..... .++.+ .++|+||++|+
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~--~V~~~~~~~~~~~~v~------------------~~l~~--~~~D~ViH~Aa 66 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGI--DFHYGSGRLENRASLE------------------ADIDA--VKPTHVFNAAG 66 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCC--EEEEecCccCCHHHHH------------------HHHHh--cCCCEEEECCc
Confidence 47999999999999999999998887 776542211 11111 11111 26899999998
Q ss_pred CCCCCC-----CCHHHHHHHHHHHHHHHHHHHHHhCCC
Q 019519 106 VPRKPG-----MTRDDLFNINAGIVKDLCSAIAKYCPN 138 (340)
Q Consensus 106 ~~~~~g-----~~r~~~~~~N~~i~~~i~~~i~~~~p~ 138 (340)
....+. ....+.+..|+.....+++.+++.+..
T Consensus 67 ~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~ 104 (298)
T PLN02778 67 VTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV 104 (298)
T ss_pred ccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 643222 245677889999999999999987543
No 99
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=97.82 E-value=0.00022 Score=68.32 Aligned_cols=170 Identities=14% Similarity=0.093 Sum_probs=94.7
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEE---EEe-cCCccccccC--CCCEEEE
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVA---GYM-GNDQLGQALE--DSDVVII 102 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~---~~~-~~~d~~~al~--~aDiVi~ 102 (340)
|||.|+||+|++|++++..|+..+. ..++.+|.....+....+.+.....++. ... ...++.++++ ++|+||+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQ-DSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMH 79 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCC-CeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence 5899999999999999999988774 2466677533111111111111011221 111 1123344554 4899999
Q ss_pred cCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhC-------CC-cEEEEecCCCCccHH--------------HHHHH
Q 019519 103 PAGVPRK--PGMTRDDLFNINAGIVKDLCSAIAKYC-------PN-AIVNMISNPVNSTVP--------------IAAEV 158 (340)
Q Consensus 103 ~ag~~~~--~g~~r~~~~~~N~~i~~~i~~~i~~~~-------p~-a~viv~tNP~d~~t~--------------~~~~~ 158 (340)
+|+.... ......+.+..|+.....+++.+.++. .. ..+|.+|-.. +... ..
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~~~~~~~~~~--- 155 (352)
T PRK10084 80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDE-VYGDLPHPDEVENSEELPLF--- 155 (352)
T ss_pred CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchh-hcCCCCccccccccccCCCc---
Confidence 9986432 112345678899999999999998752 11 2444443321 0000 00
Q ss_pred HHHhCCCCCCceEeccchhHHHHHHHHHHHcCCCCCCCc-eeEEEec
Q 019519 159 FKKAGTYNEKKLFGVTTLDVVRAKTFYAGKANVNVAEVN-VPVVGGH 204 (340)
Q Consensus 159 ~~~sg~~~~~kviG~~~ld~~R~~~~la~~l~v~~~~v~-~~v~G~h 204 (340)
-.... +.|...+|.+.....++-..+++..|++.-.++ ..++|.+
T Consensus 156 ~E~~~-~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~ 201 (352)
T PRK10084 156 TETTA-YAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPY 201 (352)
T ss_pred cccCC-CCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCC
Confidence 01112 345567777655555555556777777655554 3467765
No 100
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=97.82 E-value=0.00012 Score=68.55 Aligned_cols=166 Identities=16% Similarity=0.093 Sum_probs=94.9
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEE-ecCCccccccCCC-CEEEEcCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGY-MGNDQLGQALEDS-DVVIIPAGV 106 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~-~~~~d~~~al~~a-DiVi~~ag~ 106 (340)
|+|.|+||+|++|++++..|.+.++ +|+.+|.......... .+.. .+... +......+.++++ |.||++++.
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~-~~~~---~~~~d~~~~~~~~~~~~~~~d~vih~aa~ 74 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGH--DVRGLDRLRDGLDPLL-SGVE---FVVLDLTDRDLVDELAKGVPDAVIHLAAQ 74 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCC--eEEEEeCCCccccccc-cccc---eeeecccchHHHHHHHhcCCCEEEEcccc
Confidence 3599999999999999999999887 9999997652111111 1111 01110 0001223455666 999999987
Q ss_pred CCCCCCCH---HHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccH-H----HHHHHHHH-hCCCCCCceEeccchh
Q 019519 107 PRKPGMTR---DDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTV-P----IAAEVFKK-AGTYNEKKLFGVTTLD 177 (340)
Q Consensus 107 ~~~~g~~r---~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t-~----~~~~~~~~-sg~~~~~kviG~~~ld 177 (340)
...++..+ .++...|+...+++++..++ +.-..++. +......- . .+. .. .. ..|...+|.+.+.
T Consensus 75 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~-~~~~~~v~-~ss~~~~~~~~~~~~~~---E~~~~-~~p~~~Yg~sK~~ 148 (314)
T COG0451 75 SSVPDSNASDPAEFLDVNVDGTLNLLEAARA-AGVKRFVF-ASSVSVVYGDPPPLPID---EDLGP-PRPLNPYGVSKLA 148 (314)
T ss_pred CchhhhhhhCHHHHHHHHHHHHHHHHHHHHH-cCCCeEEE-eCCCceECCCCCCCCcc---cccCC-CCCCCHHHHHHHH
Confidence 65444332 35788999999999999998 33334443 32221110 0 110 11 12 2222246666544
Q ss_pred HHHHHHHHHHHcCCCCCCCce-eEEEecCC
Q 019519 178 VVRAKTFYAGKANVNVAEVNV-PVVGGHAG 206 (340)
Q Consensus 178 ~~R~~~~la~~l~v~~~~v~~-~v~G~hg~ 206 (340)
..+.-...++..+++..-++. .++|....
T Consensus 149 ~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~ 178 (314)
T COG0451 149 AEQLLRAYARLYGLPVVILRPFNVYGPGDK 178 (314)
T ss_pred HHHHHHHHHHHhCCCeEEEeeeeeeCCCCC
Confidence 444444444455677666664 57776543
No 101
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=97.82 E-value=5.5e-05 Score=73.52 Aligned_cols=166 Identities=12% Similarity=0.042 Sum_probs=93.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEE-EEe-cCCccccccCCCCEEEEcCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVA-GYM-GNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~-~~~-~~~d~~~al~~aDiVi~~ag 105 (340)
.|||.|+||+|+||++++..|...++ +|..+|..... . +........+. ... ...++..+++++|+||++|+
T Consensus 21 ~~~IlVtGgtGfIG~~l~~~L~~~G~--~V~~v~r~~~~-~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa 94 (370)
T PLN02695 21 KLRICITGAGGFIASHIARRLKAEGH--YIIASDWKKNE-H---MSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA 94 (370)
T ss_pred CCEEEEECCccHHHHHHHHHHHhCCC--EEEEEEecccc-c---cccccccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence 47999999999999999999998887 99999964311 0 00000000111 100 01123345679999999987
Q ss_pred CCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCC-----CccH---HHHHHHHHHh--CCCCCCceEe
Q 019519 106 VPRKPG---MTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPV-----NSTV---PIAAEVFKKA--GTYNEKKLFG 172 (340)
Q Consensus 106 ~~~~~g---~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~-----d~~t---~~~~~~~~~s--g~~~~~kviG 172 (340)
.....+ ......+..|+.....+++.+++...+.+ |.+|... .... .+ .... + +.|...+|
T Consensus 95 ~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~-V~~SS~~vYg~~~~~~~~~~~----~E~~~~p-~~p~s~Yg 168 (370)
T PLN02695 95 DMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRF-FYASSACIYPEFKQLETNVSL----KESDAWP-AEPQDAYG 168 (370)
T ss_pred ccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEE-EEeCchhhcCCccccCcCCCc----CcccCCC-CCCCCHHH
Confidence 432111 12233456899999999999987765544 4344321 0000 00 0011 2 34455666
Q ss_pred ccchhHHHHHHHHHHHcCCCCCCCc-eeEEEecC
Q 019519 173 VTTLDVVRAKTFYAGKANVNVAEVN-VPVVGGHA 205 (340)
Q Consensus 173 ~~~ld~~R~~~~la~~l~v~~~~v~-~~v~G~hg 205 (340)
.+.....++-...++..|++..-++ ..++|.++
T Consensus 169 ~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~ 202 (370)
T PLN02695 169 LEKLATEELCKHYTKDFGIECRIGRFHNIYGPFG 202 (370)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCC
Confidence 6544444444445566677655554 34667653
No 102
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=97.82 E-value=0.00017 Score=71.21 Aligned_cols=113 Identities=25% Similarity=0.283 Sum_probs=69.4
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCC----------------CCceEEEEecCCcccc
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHIN----------------TRSEVAGYMGNDQLGQ 92 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~----------------~~~~v~~~~~~~d~~~ 92 (340)
|||+|||. |.+|..++..|+..|+ +|+.+|+++.+. .+|.... ...++... +++.+
T Consensus 1 mkI~vIGl-G~~G~~lA~~La~~G~--~V~~~d~~~~~v--~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~---~~~~~ 72 (411)
T TIGR03026 1 MKIAVIGL-GYVGLPLAALLADLGH--EVTGVDIDQEKV--DKLNKGKSPIYEPGLDELLAKALAAGRLRAT---TDYED 72 (411)
T ss_pred CEEEEECC-CchhHHHHHHHHhcCC--eEEEEECCHHHH--HHhhcCCCCCCCCCHHHHHHHhhhcCCeEEE---CCHHH
Confidence 58999998 9999999999998888 899999975221 1222110 01224432 45667
Q ss_pred ccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEe-cCCCCccHHHH
Q 019519 93 ALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMI-SNPVNSTVPIA 155 (340)
Q Consensus 93 al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNP~d~~t~~~ 155 (340)
++++||+||++...|..... .-+...+.+.++.+.++. ++.+++.. |-|.+....+.
T Consensus 73 ~~~~advvii~vpt~~~~~~------~~d~~~v~~~~~~i~~~l~~g~lvi~~STv~pgt~~~l~ 131 (411)
T TIGR03026 73 AIRDADVIIICVPTPLKEDG------SPDLSYVESAAETIAKHLRKGATVVLESTVPPGTTEEVV 131 (411)
T ss_pred HHhhCCEEEEEeCCCCCCCC------CcChHHHHHHHHHHHHhcCCCCEEEEeCcCCCCchHHHH
Confidence 89999999999877654321 123344444455555443 44444433 44555544443
No 103
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=97.78 E-value=0.00025 Score=67.48 Aligned_cols=114 Identities=20% Similarity=0.176 Sum_probs=70.2
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCC-CCce-EEEEe-cCCccccccC--CCCEEE
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHIN-TRSE-VAGYM-GNDQLGQALE--DSDVVI 101 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~-~~~~-v~~~~-~~~d~~~al~--~aDiVi 101 (340)
|||.|+||+|++|++++..|+..+. +|+++|... .......+.+.. .... +.... ....+.++++ ++|+||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vv 78 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGH--DVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVI 78 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEE
Confidence 6899999999999999999998887 899888643 111111122111 0111 11111 1112233444 689999
Q ss_pred EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 102 IPAGVPRKP--GMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 102 ~~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
++|+..... .....+.+..|+.....+++.+++.... .++.+|
T Consensus 79 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S 123 (338)
T PRK10675 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK-NLIFSS 123 (338)
T ss_pred ECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEec
Confidence 998764321 1234567889999999999998876433 344444
No 104
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=97.78 E-value=0.00023 Score=68.43 Aligned_cols=113 Identities=13% Similarity=0.047 Sum_probs=68.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHH--HHHHHhcCCCCceEEEEec----CCccccccCCCCEEE
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGHINTRSEVAGYMG----NDQLGQALEDSDVVI 101 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~--~~~dl~~~~~~~~v~~~~~----~~d~~~al~~aDiVi 101 (340)
.|||.|+||+|++|++++..|+..+. +|++++.+.... ...++.. ..+++.... ..++.+++++.|+||
T Consensus 10 ~~~vLVtG~~GfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (353)
T PLN02896 10 TGTYCVTGATGYIGSWLVKLLLQRGY--TVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEEGSFDEAVKGCDGVF 84 (353)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCHHHHHHHHcCCCEEE
Confidence 47999999999999999999998887 888887654211 1112221 122332221 112345678899999
Q ss_pred EcCCCCCCC---C-CCHHH-----HHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 102 IPAGVPRKP---G-MTRDD-----LFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 102 ~~ag~~~~~---g-~~r~~-----~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
++|+..... . ....+ .+..|+.....+++.+.++..-..+|++|
T Consensus 85 h~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~S 137 (353)
T PLN02896 85 HVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTS 137 (353)
T ss_pred ECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEe
Confidence 999864211 1 12222 33344577888888887663223455544
No 105
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=97.76 E-value=6.3e-05 Score=58.31 Aligned_cols=94 Identities=20% Similarity=0.282 Sum_probs=60.2
Q ss_pred eEEEEcCCCChHHHHHHHHHhCC-CcceEEEE-eCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCCC
Q 019519 30 KVAVLGAAGGIGQPLALLMKLNP-LVSRLALY-DIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVP 107 (340)
Q Consensus 30 KI~IiGaaG~VG~~~a~~l~~~~-~~~el~L~-D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~~ 107 (340)
||+|||+ |.+|++++..|...+ ...+|.++ +.++. ...++.... ...+.. .+..+++++||+||++.-
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~--~~~~~~~~~-~~~~~~----~~~~~~~~~advvilav~-- 70 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPE--KAAELAKEY-GVQATA----DDNEEAAQEADVVILAVK-- 70 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHH--HHHHHHHHC-TTEEES----EEHHHHHHHTSEEEE-S---
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHH--HHHHHHHhh-cccccc----CChHHhhccCCEEEEEEC--
Confidence 7999998 999999999999887 23488866 77642 222232211 112221 245788999999999851
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCC
Q 019519 108 RKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNP 147 (340)
Q Consensus 108 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP 147 (340)
-..+.++++.+....++..+|-++||
T Consensus 71 --------------p~~~~~v~~~i~~~~~~~~vis~~ag 96 (96)
T PF03807_consen 71 --------------PQQLPEVLSEIPHLLKGKLVISIAAG 96 (96)
T ss_dssp --------------GGGHHHHHHHHHHHHTTSEEEEESTT
T ss_pred --------------HHHHHHHHHHHhhccCCCEEEEeCCC
Confidence 13345556666445578888877776
No 106
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=97.74 E-value=0.00068 Score=64.18 Aligned_cols=105 Identities=14% Similarity=0.096 Sum_probs=66.2
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC-cHHHHHHHhcC-CCCceEEEEe----cCCccccccCCCCEEEE
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-TPGVAADVGHI-NTRSEVAGYM----GNDQLGQALEDSDVVII 102 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~-~~~~~v~~~~----~~~d~~~al~~aDiVi~ 102 (340)
++|.|+||+|++|++++..|+..++ +|++...+. .......+... ....+++... ...++.++++++|+||+
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 6 KLVCVTGASGYIASWIVKLLLLRGY--TVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 5999999999999999999998887 777554443 11122222211 1111233221 11234566789999999
Q ss_pred cCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHh
Q 019519 103 PAGVPRKP-GMTRDDLFNINAGIVKDLCSAIAKY 135 (340)
Q Consensus 103 ~ag~~~~~-g~~r~~~~~~N~~i~~~i~~~i~~~ 135 (340)
+|+..... .....+++..|+.....+.+.+.+.
T Consensus 84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~ 117 (322)
T PLN02986 84 TASPVFFTVKDPQTELIDPALKGTINVLNTCKET 117 (322)
T ss_pred eCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhc
Confidence 99853211 1122345678999999999988765
No 107
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.73 E-value=0.00017 Score=61.94 Aligned_cols=88 Identities=22% Similarity=0.280 Sum_probs=57.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVP 107 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~~ 107 (340)
|+||++||. |.+|+.++..|...++ +|..||++. ....++.+.. .+.. .++.+++++||+|+.+.
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~--~v~~~d~~~--~~~~~~~~~g----~~~~---~s~~e~~~~~dvvi~~v--- 65 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGY--EVTVYDRSP--EKAEALAEAG----AEVA---DSPAEAAEQADVVILCV--- 65 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTT--EEEEEESSH--HHHHHHHHTT----EEEE---SSHHHHHHHBSEEEE-S---
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCC--eEEeeccch--hhhhhhHHhh----hhhh---hhhhhHhhcccceEeec---
Confidence 679999998 9999999999999998 999999764 2223344322 3332 35678899999999974
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHH--HHHhC-CCcEEE
Q 019519 108 RKPGMTRDDLFNINAGIVKDLCSA--IAKYC-PNAIVN 142 (340)
Q Consensus 108 ~~~g~~r~~~~~~N~~i~~~i~~~--i~~~~-p~a~vi 142 (340)
.+.+.++++... +.... +..++|
T Consensus 66 ------------~~~~~v~~v~~~~~i~~~l~~g~iii 91 (163)
T PF03446_consen 66 ------------PDDDAVEAVLFGENILAGLRPGKIII 91 (163)
T ss_dssp ------------SSHHHHHHHHHCTTHGGGS-TTEEEE
T ss_pred ------------ccchhhhhhhhhhHHhhccccceEEE
Confidence 234555666655 54444 344444
No 108
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=97.70 E-value=0.00019 Score=66.41 Aligned_cols=99 Identities=19% Similarity=0.227 Sum_probs=67.5
Q ss_pred EEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCCCCCC
Q 019519 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKP 110 (340)
Q Consensus 31 I~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~~~~~ 110 (340)
|.|+||+|++|++++..|+..++ +|+.++.+...... +... .+..... .+..++++++|+||++++.+...
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~--~~~~----~~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~ 71 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGH--EVTILTRSPPAGAN--TKWE----GYKPWAP-LAESEALEGADAVINLAGEPIAD 71 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCC--EEEEEeCCCCCCCc--ccce----eeecccc-cchhhhcCCCCEEEECCCCCccc
Confidence 57999999999999999998887 99999986521100 0000 0111111 22356789999999999876432
Q ss_pred C-C---CHHHHHHHHHHHHHHHHHHHHHhCCC
Q 019519 111 G-M---TRDDLFNINAGIVKDLCSAIAKYCPN 138 (340)
Q Consensus 111 g-~---~r~~~~~~N~~i~~~i~~~i~~~~p~ 138 (340)
+ . ....+...|+...+.+++.+++....
T Consensus 72 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~ 103 (292)
T TIGR01777 72 KRWTEERKQEIRDSRIDTTRALVEAIAAAEQK 103 (292)
T ss_pred ccCCHHHHHHHHhcccHHHHHHHHHHHhcCCC
Confidence 2 1 23456677999999999999987643
No 109
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=97.70 E-value=0.00058 Score=71.51 Aligned_cols=119 Identities=14% Similarity=0.015 Sum_probs=72.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEec-CCc---ccccc--CCCCEE
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMG-NDQ---LGQAL--EDSDVV 100 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~-~~d---~~~al--~~aDiV 100 (340)
+++||.|+||+|++|++++..|+..+...+|+.+|..........+.......+++.... -+| +...+ .++|+|
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V 84 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTI 84 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEE
Confidence 357999999999999999999988743338998986431111111111100112333221 112 11122 689999
Q ss_pred EEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 101 IIPAGVPRKPG--MTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 101 i~~ag~~~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
|++|+...... ....++...|+.....+++.+++.+.-..+|.+|
T Consensus 85 iHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~S 131 (668)
T PLN02260 85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVS 131 (668)
T ss_pred EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Confidence 99998653221 1234667889999999999998876333555554
No 110
>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.69 E-value=0.0003 Score=67.69 Aligned_cols=100 Identities=20% Similarity=0.260 Sum_probs=66.7
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHh--cC--C-------CCceEEEEecCCcccccc
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVG--HI--N-------TRSEVAGYMGNDQLGQAL 94 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~--~~--~-------~~~~v~~~~~~~d~~~al 94 (340)
+++|||+|+|+ |.+|+.++..|...+ +++++..++.. ..++. +. . .+.++..+ +|+.+++
T Consensus 5 ~~~mkI~IiGa-Ga~G~alA~~La~~g---~v~l~~~~~~~--~~~i~~~~~~~~~l~~~~~l~~~i~~t---~d~~~a~ 75 (341)
T PRK12439 5 KREPKVVVLGG-GSWGTTVASICARRG---PTLQWVRSAET--ADDINDNHRNSRYLGNDVVLSDTLRAT---TDFAEAA 75 (341)
T ss_pred cCCCeEEEECC-CHHHHHHHHHHHHCC---CEEEEeCCHHH--HHHHHhcCCCcccCCCCcccCCCeEEE---CCHHHHH
Confidence 35789999998 999999999998876 36777765422 22222 11 0 11234432 5667789
Q ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecCCCCc
Q 019519 95 EDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNS 150 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~ 150 (340)
+++|+||++. | ...++++++.+..+- ++..+|.++|-.+.
T Consensus 76 ~~aDlVilav--p--------------s~~~~~vl~~i~~~l~~~~~vIsl~kGi~~ 116 (341)
T PRK12439 76 NCADVVVMGV--P--------------SHGFRGVLTELAKELRPWVPVVSLVKGLEQ 116 (341)
T ss_pred hcCCEEEEEe--C--------------HHHHHHHHHHHHhhcCCCCEEEEEEeCCcC
Confidence 9999999984 2 335666666666553 67778888987764
No 111
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=97.69 E-value=0.00061 Score=63.96 Aligned_cols=106 Identities=20% Similarity=0.236 Sum_probs=63.3
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCC-CceEEEE-ecCCccccccCCCCEEEEcCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINT-RSEVAGY-MGNDQLGQALEDSDVVIIPAGV 106 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~-~~~v~~~-~~~~d~~~al~~aDiVi~~ag~ 106 (340)
|||+|+|+ |.+|+.++..|...+. +|.++|.+........-..... ....... ...++..+ ++++|+||++.-.
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~g~--~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~vila~k~ 76 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQAGH--DVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAE-LGPQDLVILAVKA 76 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhH-cCCCCEEEEeccc
Confidence 68999998 9999999999998886 8999998542111111011100 0111100 11234434 4899999998521
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecCCCCccHHH
Q 019519 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKY-CPNAIVNMISNPVNSTVPI 154 (340)
Q Consensus 107 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP~d~~t~~ 154 (340)
. -+.++++.+..+ .++..|+...|.++....+
T Consensus 77 ~----------------~~~~~~~~l~~~l~~~~~iv~~~nG~~~~~~l 109 (304)
T PRK06522 77 Y----------------QLPAALPSLAPLLGPDTPVLFLQNGVGHLEEL 109 (304)
T ss_pred c----------------cHHHHHHHHhhhcCCCCEEEEecCCCCcHHHH
Confidence 1 123344444443 3667888899998766543
No 112
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=97.69 E-value=0.00044 Score=68.34 Aligned_cols=114 Identities=21% Similarity=0.244 Sum_probs=69.0
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCC--------------CCceEEEEecCCccc
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHIN--------------TRSEVAGYMGNDQLG 91 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~--------------~~~~v~~~~~~~d~~ 91 (340)
|.++||+|||. |.+|..+|..|+..|+ +|..+|+++.+-..+...... ....+... ++
T Consensus 1 m~~~kI~VIGl-G~~G~~~A~~La~~G~--~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~---~~-- 72 (415)
T PRK11064 1 MSFETISVIGL-GYIGLPTAAAFASRQK--QVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRAT---TT-- 72 (415)
T ss_pred CCccEEEEECc-chhhHHHHHHHHhCCC--EEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeee---cc--
Confidence 45689999998 9999999999999987 999999986322221111110 01123221 22
Q ss_pred cccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEe-cCCCCccHHHH
Q 019519 92 QALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMI-SNPVNSTVPIA 155 (340)
Q Consensus 92 ~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNP~d~~t~~~ 155 (340)
+++||+||++...|.+.+. ..++..+.+.++.+.++. ++.+||.- |.|.+..-.+.
T Consensus 73 --~~~aDvvii~vptp~~~~~------~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~pgtt~~~~ 130 (415)
T PRK11064 73 --PEPADAFLIAVPTPFKGDH------EPDLTYVEAAAKSIAPVLKKGDLVILESTSPVGATEQMA 130 (415)
T ss_pred --cccCCEEEEEcCCCCCCCC------CcChHHHHHHHHHHHHhCCCCCEEEEeCCCCCCHHHHHH
Confidence 4589999999877754321 123444555556666655 34444433 55666554443
No 113
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=97.68 E-value=0.00029 Score=67.41 Aligned_cols=155 Identities=8% Similarity=0.006 Sum_probs=87.7
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc---HHHHHHHhc-C--CCCceEEEEe-cCC---ccccccCC--
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PGVAADVGH-I--NTRSEVAGYM-GND---QLGQALED-- 96 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~---~~~~~dl~~-~--~~~~~v~~~~-~~~---d~~~al~~-- 96 (340)
++|.|+||+|++|++++..|+..+. +|+++|.+.. ......+.. . .....++... +-+ .+.+++++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~ 78 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGY--EVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIK 78 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCC--EEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCC
Confidence 4899999999999999999998887 8999987641 111111110 0 0011222221 112 23345564
Q ss_pred CCEEEEcCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHHHhC-CC-cEEEEecC------CCCccHHHHHHHHHHhCCCC
Q 019519 97 SDVVIIPAGVPRKP-G-MTRDDLFNINAGIVKDLCSAIAKYC-PN-AIVNMISN------PVNSTVPIAAEVFKKAGTYN 166 (340)
Q Consensus 97 aDiVi~~ag~~~~~-g-~~r~~~~~~N~~i~~~i~~~i~~~~-p~-a~viv~tN------P~d~~t~~~~~~~~~sg~~~ 166 (340)
.|+||++|+..... . ......+..|+.....+++.+.+.+ .+ ..++.+|. +.+. .. -.... +.
T Consensus 79 ~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~--~~----~E~~~-~~ 151 (343)
T TIGR01472 79 PTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEI--PQ----NETTP-FY 151 (343)
T ss_pred CCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCC--CC----CCCCC-CC
Confidence 59999999864321 1 1233445668888889999888765 22 34544332 1110 00 01122 44
Q ss_pred CCceEeccchhHHHHHHHHHHHcCCC
Q 019519 167 EKKLFGVTTLDVVRAKTFYAGKANVN 192 (340)
Q Consensus 167 ~~kviG~~~ld~~R~~~~la~~l~v~ 192 (340)
|...+|.+.+...++...+++..+++
T Consensus 152 p~~~Y~~sK~~~e~~~~~~~~~~~~~ 177 (343)
T TIGR01472 152 PRSPYAAAKLYAHWITVNYREAYGLF 177 (343)
T ss_pred CCChhHHHHHHHHHHHHHHHHHhCCc
Confidence 55667776555555666666666664
No 114
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=97.68 E-value=0.00035 Score=66.92 Aligned_cols=100 Identities=24% Similarity=0.246 Sum_probs=63.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCC-------------CceEEEEecCCcccccc
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINT-------------RSEVAGYMGNDQLGQAL 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~-------------~~~v~~~~~~~d~~~al 94 (340)
+|||+|+|+ |.+|+.++..|...++ +|.++|.++.. . .+..... ..++.. +++. +++
T Consensus 2 ~mkI~IiG~-G~mG~~~A~~L~~~G~--~V~~~~r~~~~-~--~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~-~~~ 71 (341)
T PRK08229 2 MARICVLGA-GSIGCYLGGRLAAAGA--DVTLIGRARIG-D--ELRAHGLTLTDYRGRDVRVPPSAIAF---STDP-AAL 71 (341)
T ss_pred CceEEEECC-CHHHHHHHHHHHhcCC--cEEEEecHHHH-H--HHHhcCceeecCCCcceecccceeEe---ccCh-hhc
Confidence 479999998 9999999999999887 89999975311 1 1111110 011222 2344 568
Q ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecCCCCccHH
Q 019519 95 EDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKY-CPNAIVNMISNPVNSTVP 153 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP~d~~t~ 153 (340)
+++|+||++...+ . ..++++.+..+ .++.+|+..+|..+....
T Consensus 72 ~~~D~vil~vk~~----~------------~~~~~~~l~~~~~~~~iii~~~nG~~~~~~ 115 (341)
T PRK08229 72 ATADLVLVTVKSA----A------------TADAAAALAGHARPGAVVVSFQNGVRNADV 115 (341)
T ss_pred cCCCEEEEEecCc----c------------hHHHHHHHHhhCCCCCEEEEeCCCCCcHHH
Confidence 9999999986322 1 12334445544 367777778898765443
No 115
>PLN02583 cinnamoyl-CoA reductase
Probab=97.67 E-value=0.0011 Score=62.21 Aligned_cols=113 Identities=12% Similarity=0.061 Sum_probs=71.5
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcH----HHHHHHhcCCCCceEEEEe----cCCccccccCCCCEE
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP----GVAADVGHINTRSEVAGYM----GNDQLGQALEDSDVV 100 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~----~~~~dl~~~~~~~~v~~~~----~~~d~~~al~~aDiV 100 (340)
++|+|+||+|++|++++..|+..|+ +|++.+.+... ....++.... .++.... ...++.+++.++|.|
T Consensus 7 k~vlVTGatG~IG~~lv~~Ll~~G~--~V~~~~R~~~~~~~~~~~~~l~~~~--~~~~~~~~Dl~d~~~~~~~l~~~d~v 82 (297)
T PLN02583 7 KSVCVMDASGYVGFWLVKRLLSRGY--TVHAAVQKNGETEIEKEIRGLSCEE--ERLKVFDVDPLDYHSILDALKGCSGL 82 (297)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC--EEEEEEcCchhhhHHHHHHhcccCC--CceEEEEecCCCHHHHHHHHcCCCEE
Confidence 5899999999999999999999988 88888764211 1112221111 1222221 112345788999999
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 101 IIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 101 i~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
++.++.+........+.+..|+.....+.+.+.+...-..||++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~S 127 (297)
T PLN02583 83 FCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTS 127 (297)
T ss_pred EEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Confidence 987654432211234677889999999999988763113444443
No 116
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=97.67 E-value=0.00046 Score=64.89 Aligned_cols=118 Identities=10% Similarity=0.120 Sum_probs=70.5
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCC-----CceEEE-EecCCccccccCCCCEEEE
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINT-----RSEVAG-YMGNDQLGQALEDSDVVII 102 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~-----~~~v~~-~~~~~d~~~al~~aDiVi~ 102 (340)
|||+|+|+ |.+|..++..|...++ +|.+++. +..-. .+.+... ...... ....+|..++.+++|+||+
T Consensus 1 mkI~IiG~-G~iG~~~a~~L~~~g~--~V~~~~r-~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vil 74 (305)
T PRK12921 1 MRIAVVGA-GAVGGTFGGRLLEAGR--DVTFLVR-PKRAK--ALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVIL 74 (305)
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCC--ceEEEec-HHHHH--HHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEE
Confidence 68999998 9999999999998887 8999997 31111 1221110 001100 0011344455689999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEe-ccc
Q 019519 103 PAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKY-CPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFG-VTT 175 (340)
Q Consensus 103 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG-~~~ 175 (340)
+.-.+ -+.++++.+..+ .++..|+.+.|.++....+. +. +|++++++ ++.
T Consensus 75 avk~~----------------~~~~~~~~l~~~~~~~~~ii~~~nG~~~~~~l~----~~---~~~~~v~~g~~~ 126 (305)
T PRK12921 75 AVKAY----------------QLDAAIPDLKPLVGEDTVIIPLQNGIGQLEQLE----PY---FGRERVLGGVVF 126 (305)
T ss_pred Eeccc----------------CHHHHHHHHHhhcCCCCEEEEeeCCCChHHHHH----Hh---CCcccEEEEEEE
Confidence 85211 133344455544 35677888899987554432 22 66677774 443
No 117
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=97.65 E-value=0.00047 Score=67.49 Aligned_cols=113 Identities=20% Similarity=0.265 Sum_probs=66.3
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCC--------------CCceEEEEecCCcccccc
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHIN--------------TRSEVAGYMGNDQLGQAL 94 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~--------------~~~~v~~~~~~~d~~~al 94 (340)
|||+|||+ |.||..++..++. ++ +|+.+|+++.+ ...+.... ...++.. ++|..++.
T Consensus 1 mkI~VIGl-GyvGl~~A~~lA~-G~--~VigvD~d~~k--v~~l~~g~~~~~e~~l~~~l~~~~~~l~~---t~~~~~~~ 71 (388)
T PRK15057 1 MKITISGT-GYVGLSNGLLIAQ-NH--EVVALDILPSR--VAMLNDRISPIVDKEIQQFLQSDKIHFNA---TLDKNEAY 71 (388)
T ss_pred CEEEEECC-CHHHHHHHHHHHh-CC--cEEEEECCHHH--HHHHHcCCCCCCCcCHHHHHHhCCCcEEE---ecchhhhh
Confidence 58999998 9999999977764 66 89999998621 11122100 1123332 24556778
Q ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEE-EecCCCCccHHHH
Q 019519 95 EDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVN-MISNPVNSTVPIA 155 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~vi-v~tNP~d~~t~~~ 155 (340)
++||+||++...|....... -++..+++.++.|.+..|+.++| -.|-|.+..-.+.
T Consensus 72 ~~ad~vii~Vpt~~~~k~~~-----~dl~~v~~v~~~i~~~~~g~lVV~~STv~pgtt~~l~ 128 (388)
T PRK15057 72 RDADYVIIATPTDYDPKTNY-----FNTSSVESVIKDVVEINPYAVMVIKSTVPVGFTAAMH 128 (388)
T ss_pred cCCCEEEEeCCCCCccCCCC-----cChHHHHHHHHHHHhcCCCCEEEEeeecCCchHHHHH
Confidence 99999999976653221111 23344444445554434544443 3466666655543
No 118
>PRK06194 hypothetical protein; Provisional
Probab=97.64 E-value=0.0013 Score=60.95 Aligned_cols=160 Identities=14% Similarity=0.135 Sum_probs=87.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCCc---cccccC-----
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GNDQ---LGQALE----- 95 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al~----- 95 (340)
++++|.|+||+|++|++++..|+..|. +|+++|.+. ......++.... .++.... +-+| ++++++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~ 80 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM--KLVLADVQQDALDRAVAELRAQG--AEVLGVRTDVSDAAQVEALADAALER 80 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 346899999999999999999998887 899999865 223333343221 1332221 1122 222222
Q ss_pred --CCCEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHH----HHHHHHHhCCC-----cEEEEecCCCCccHHHHHHH
Q 019519 96 --DSDVVIIPAGVPRKP---GMTRD---DLFNINAGIVKD----LCSAIAKYCPN-----AIVNMISNPVNSTVPIAAEV 158 (340)
Q Consensus 96 --~aDiVi~~ag~~~~~---g~~r~---~~~~~N~~i~~~----i~~~i~~~~p~-----a~viv~tNP~d~~t~~~~~~ 158 (340)
..|+||+.||..... ..+.. ..+..|+..... +.+.+.+.+.+ +.++++|.....
T Consensus 81 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-------- 152 (287)
T PRK06194 81 FGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGL-------- 152 (287)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhc--------
Confidence 469999999874321 12222 234555554444 44445554432 566655543221
Q ss_pred HHHhCCCCCCceEeccchhHHHHHHHHHHHcCCCCCCCceeEEE
Q 019519 159 FKKAGTYNEKKLFGVTTLDVVRAKTFYAGKANVNVAEVNVPVVG 202 (340)
Q Consensus 159 ~~~sg~~~~~kviG~~~ld~~R~~~~la~~l~v~~~~v~~~v~G 202 (340)
.+ .+..-.++.+......+...+++.++.....+++..+.
T Consensus 153 ---~~-~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~ 192 (287)
T PRK06194 153 ---LA-PPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLC 192 (287)
T ss_pred ---cC-CCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEE
Confidence 11 33334455543333345566667776655556654443
No 119
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=97.64 E-value=0.0002 Score=67.39 Aligned_cols=99 Identities=18% Similarity=0.200 Sum_probs=64.7
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccC--CCCEEEEcCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALE--DSDVVIIPAGV 106 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~--~aDiVi~~ag~ 106 (340)
|||.|+||+|++|++++..|...+ +++.+|.... ....|+. +...+.++++ ++|+||++|+.
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g---~V~~~~~~~~-~~~~Dl~------------d~~~~~~~~~~~~~D~Vih~Aa~ 64 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG---NLIALDVHST-DYCGDFS------------NPEGVAETVRKIRPDVIVNAAAH 64 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC---CEEEeccccc-cccCCCC------------CHHHHHHHHHhcCCCEEEECCcc
Confidence 589999999999999999888776 4777775421 0000111 1112334455 58999999876
Q ss_pred CCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 107 PRKP--GMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 107 ~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
.... ..........|+.....+++.+++.+ ..++.+|
T Consensus 65 ~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g--~~~v~~S 103 (299)
T PRK09987 65 TAVDKAESEPEFAQLLNATSVEAIAKAANEVG--AWVVHYS 103 (299)
T ss_pred CCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC--CeEEEEc
Confidence 4321 12334455789999999999998875 3455444
No 120
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.63 E-value=0.00035 Score=66.67 Aligned_cols=100 Identities=15% Similarity=0.370 Sum_probs=64.0
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhc--C------CCCceEEEEecCCcccccc-CCCCE
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGH--I------NTRSEVAGYMGNDQLGQAL-EDSDV 99 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~--~------~~~~~v~~~~~~~d~~~al-~~aDi 99 (340)
|||+|+|| |.+|+.++..|...+. +|.|++.++.....+.-.+ . ..+..+..+ +|+.+++ .++|+
T Consensus 1 MkI~IiGa-Ga~G~ala~~L~~~g~--~V~l~~r~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~---~~~~~~~~~~~Dl 74 (326)
T PRK14620 1 MKISILGA-GSFGTAIAIALSSKKI--SVNLWGRNHTTFESINTKRKNLKYLPTCHLPDNISVK---SAIDEVLSDNATC 74 (326)
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCC--eEEEEecCHHHHHHHHHcCCCcccCCCCcCCCCeEEe---CCHHHHHhCCCCE
Confidence 58999998 9999999999998886 8999998652211111111 1 011234433 4555666 58999
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-h-CCCcEEEEecCCCCc
Q 019519 100 VIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAK-Y-CPNAIVNMISNPVNS 150 (340)
Q Consensus 100 Vi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~-~-~p~a~viv~tNP~d~ 150 (340)
||++. | ..-+.++++.+.. + .++..++..+|=.+.
T Consensus 75 iiiav--k--------------s~~~~~~l~~l~~~~l~~~~~vv~~~nGi~~ 111 (326)
T PRK14620 75 IILAV--P--------------TQQLRTICQQLQDCHLKKNTPILICSKGIEK 111 (326)
T ss_pred EEEEe--C--------------HHHHHHHHHHHHHhcCCCCCEEEEEEcCeeC
Confidence 99984 1 2334455555554 3 467777778887643
No 121
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.62 E-value=0.00059 Score=58.90 Aligned_cols=93 Identities=27% Similarity=0.296 Sum_probs=65.5
Q ss_pred EEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEec-C---CccccccCCCCEEEEcCCC
Q 019519 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMG-N---DQLGQALEDSDVVIIPAGV 106 (340)
Q Consensus 31 I~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~-~---~d~~~al~~aDiVi~~ag~ 106 (340)
|+|+||+|++|+.++..|+..+. +|.++-.++.+.. + + ..++.... . +++.++++++|.||.++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~--~V~~~~R~~~~~~--~--~----~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH--EVTALVRSPSKAE--D--S----PGVEIIQGDLFDPDSVKAALKGADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS--EEEEEESSGGGHH--H--C----TTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHCCC--EEEEEecCchhcc--c--c----cccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence 78999999999999999999996 9999987653221 1 1 23333321 1 2446889999999999876
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 107 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
+.+ ....++.+.+.+++.... .++++|
T Consensus 71 ~~~-----------~~~~~~~~~~a~~~~~~~-~~v~~s 97 (183)
T PF13460_consen 71 PPK-----------DVDAAKNIIEAAKKAGVK-RVVYLS 97 (183)
T ss_dssp TTT-----------HHHHHHHHHHHHHHTTSS-EEEEEE
T ss_pred hcc-----------cccccccccccccccccc-cceeee
Confidence 543 277888888888877544 444444
No 122
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.59 E-value=0.00037 Score=66.01 Aligned_cols=79 Identities=24% Similarity=0.370 Sum_probs=59.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVP 107 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~~ 107 (340)
.|||+|||+ |.+|++++..|...++ +|.++|.++. .++.+++++||+||++. |
T Consensus 4 ~m~I~iiG~-G~~G~~lA~~l~~~G~--~V~~~~r~~~----------------------~~~~~~~~~advvi~~v--p 56 (308)
T PRK14619 4 PKTIAILGA-GAWGSTLAGLASANGH--RVRVWSRRSG----------------------LSLAAVLADADVIVSAV--S 56 (308)
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCC--EEEEEeCCCC----------------------CCHHHHHhcCCEEEEEC--C
Confidence 479999998 9999999999999887 9999997631 23457788999999984 2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHh--CCCcEEEEecCC
Q 019519 108 RKPGMTRDDLFNINAGIVKDLCSAIAKY--CPNAIVNMISNP 147 (340)
Q Consensus 108 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tNP 147 (340)
...++++++.+..+ .++.+++..|+.
T Consensus 57 --------------~~~~~~v~~~l~~~~~~~~~ivi~~s~g 84 (308)
T PRK14619 57 --------------MKGVRPVAEQVQALNLPPETIIVTATKG 84 (308)
T ss_pred --------------hHHHHHHHHHHHHhcCCCCcEEEEeCCc
Confidence 13455555666543 467788777773
No 123
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.58 E-value=0.00043 Score=66.13 Aligned_cols=97 Identities=18% Similarity=0.173 Sum_probs=61.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcC------C--CCceEEEEecCCccccccCCCCE
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHI------N--TRSEVAGYMGNDQLGQALEDSDV 99 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~------~--~~~~v~~~~~~~d~~~al~~aDi 99 (340)
+|||+|||+ |.+|+.++..|...++ +|.++|.++.......-.+. . ...++... +++.++++++|+
T Consensus 4 ~m~I~iIG~-G~mG~~ia~~L~~~G~--~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~---~~~~e~~~~aD~ 77 (328)
T PRK14618 4 GMRVAVLGA-GAWGTALAVLAASKGV--PVRLWARRPEFAAALAAERENREYLPGVALPAELYPT---ADPEEALAGADF 77 (328)
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEe---CCHHHHHcCCCE
Confidence 479999998 9999999999998887 89999986522221111110 1 11123332 456677899999
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCC
Q 019519 100 VIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVN 149 (340)
Q Consensus 100 Vi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d 149 (340)
||++.-.. -++++.+. ..|..+++.++|..+
T Consensus 78 Vi~~v~~~----------------~~~~v~~~---l~~~~~vi~~~~Gi~ 108 (328)
T PRK14618 78 AVVAVPSK----------------ALRETLAG---LPRALGYVSCAKGLA 108 (328)
T ss_pred EEEECchH----------------HHHHHHHh---cCcCCEEEEEeeccc
Confidence 99985110 12333332 336677888888654
No 124
>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.58 E-value=0.00063 Score=65.95 Aligned_cols=98 Identities=19% Similarity=0.322 Sum_probs=65.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCC-----cceEEEEeCCCc---HHHHHHHh--cCC--------CCceEEEEecCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPL-----VSRLALYDIANT---PGVAADVG--HIN--------TRSEVAGYMGND 88 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~-----~~el~L~D~~~~---~~~~~dl~--~~~--------~~~~v~~~~~~~ 88 (340)
.++||+|||+ |.-|+++|..|...+. ..+|.|+..++. +..+.++. |.. .+.++..+ +
T Consensus 10 ~~~ki~ViGa-G~wGtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~N~~ylp~~~Lp~ni~~t---s 85 (365)
T PTZ00345 10 GPLKVSVIGS-GNWGSAISKVVGENTQRNYIFHNEVRMWVLEEIVEGEKLSDIINTKHENVKYLPGIKLPDNIVAV---S 85 (365)
T ss_pred CCCeEEEECC-CHHHHHHHHHHHhcCCcccCCCCeEEEEEecccccchHHHHHHHhcCCCcccCCCCcCCCceEEe---c
Confidence 4579999998 9999999999987751 238899987762 23344443 221 23456654 5
Q ss_pred ccccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH--hC-CCcEEEEe
Q 019519 89 QLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAK--YC-PNAIVNMI 144 (340)
Q Consensus 89 d~~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~--~~-p~a~viv~ 144 (340)
|+.+++++||+||++. | ...++++++.++. +- ++..+|.+
T Consensus 86 dl~eav~~aDiIvlAV--P--------------sq~l~~vl~~l~~~~~l~~~~~iIS~ 128 (365)
T PTZ00345 86 DLKEAVEDADLLIFVI--P--------------HQFLESVLSQIKENNNLKKHARAISL 128 (365)
T ss_pred CHHHHHhcCCEEEEEc--C--------------hHHHHHHHHHhccccccCCCCEEEEE
Confidence 7778999999999874 2 3556677777765 33 34455544
No 125
>PLN02240 UDP-glucose 4-epimerase
Probab=97.57 E-value=0.0011 Score=63.31 Aligned_cols=116 Identities=19% Similarity=0.150 Sum_probs=71.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCC--CCceEEEEe----cCCccccccC--C
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHIN--TRSEVAGYM----GNDQLGQALE--D 96 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~--~~~~v~~~~----~~~d~~~al~--~ 96 (340)
+++||.|+||+|++|++++..|+..+. +|+++|... .......+.+.. ...++.... ...++.++++ +
T Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~ 81 (352)
T PLN02240 4 MGRTILVTGGAGYIGSHTVLQLLLAGY--KVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTR 81 (352)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCC
Confidence 346999999999999999999998886 899998643 111111111110 011222211 1122223343 6
Q ss_pred CCEEEEcCCCCCC-CC-CCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 97 SDVVIIPAGVPRK-PG-MTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 97 aDiVi~~ag~~~~-~g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
+|+||++++.... .. ......+..|+.....+++.+.+...+ .++.+|
T Consensus 82 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S 131 (352)
T PLN02240 82 FDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCK-KLVFSS 131 (352)
T ss_pred CCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEc
Confidence 8999999886421 11 234567889999999999988876534 344444
No 126
>PRK07201 short chain dehydrogenase; Provisional
Probab=97.55 E-value=0.0011 Score=68.96 Aligned_cols=109 Identities=13% Similarity=0.072 Sum_probs=67.9
Q ss_pred CeEEEEcCCCChHHHHHHHHHh--CCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecC-Cc--------cccccCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKL--NPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGN-DQ--------LGQALEDS 97 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~--~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~-~d--------~~~al~~a 97 (340)
|||.|+||+|++|++++..|+. .+. +|.+++.+.......++.......+++...+. .| ..+.++++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~--~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l~~~ 78 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREA--TVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAELGDI 78 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCC--EEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHhcCC
Confidence 5899999999999999999984 444 89999986522222222111000123322110 11 01223899
Q ss_pred CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcE
Q 019519 98 DVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAI 140 (340)
Q Consensus 98 DiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~ 140 (340)
|+||++|+... ......+....|+...+.+++.+.+...+.+
T Consensus 79 D~Vih~Aa~~~-~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~ 120 (657)
T PRK07201 79 DHVVHLAAIYD-LTADEEAQRAANVDGTRNVVELAERLQAATF 120 (657)
T ss_pred CEEEECceeec-CCCCHHHHHHHHhHHHHHHHHHHHhcCCCeE
Confidence 99999998542 2234456667899999999999887644433
No 127
>PF11975 Glyco_hydro_4C: Family 4 glycosyl hydrolase C-terminal domain; InterPro: IPR022616 This domain is found primarily in bacterial family 4 glycosyl hydrolases. It is found in the C terminus. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 1UP4_A 1UP6_C 1UP7_E 1VJT_A 1U8X_X 1S6Y_A 3FEF_D 1OBB_A.
Probab=97.55 E-value=0.00057 Score=62.16 Aligned_cols=78 Identities=13% Similarity=0.210 Sum_probs=50.8
Q ss_pred CCCccchHHHHHHHHHHHHHcCCCCCCcEEEeee-eeCCC---CCccEEEEeEEEcCCceEEEecCCCCCHHHHHHHHHH
Q 019519 248 KGSATLSMAYAGAIFADACLKGLNGVPDVVECSF-VQSTV---TELPFFASKVRLGKNGVEEVLGLGPLSDFEQEGLEKL 323 (340)
Q Consensus 248 kg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~~-~~g~~---~~~~~~svP~~ig~~Gv~~i~~~~~L~~~E~~~l~~s 323 (340)
+++..++ ..++.+|.+|.+ .++.+++ ++|.+ |+|.++++||+|+++|+.++ ..++||+...++++..
T Consensus 133 ~~~~~~a-----~~~i~~i~~~~~---~~~~vNv~N~G~I~nLp~davVEvp~~v~~~Gi~P~-~~g~lP~~~~~li~~~ 203 (232)
T PF11975_consen 133 RGSGEYA-----EAAIEAIYNDKP---KRFVVNVPNNGAIPNLPDDAVVEVPCYVDGDGIHPV-AVGPLPPAIAGLIQQV 203 (232)
T ss_dssp STTSCHH-----HHHHHHHHHSSE---EEEEEEEE-TTSSTTS-TTSEEEEEEEEETTEEEEB--SB---HHHHHHHHHH
T ss_pred ccccchH-----HHHHHHHhcCCC---eEEEEECCCCCccCCCCCCcEEEEEEEEcCCeeEec-cCCCCCHHHHHHHHHH
Confidence 3556666 334455677653 3455544 77875 89999999999999999995 6679999999988776
Q ss_pred HHHHHHHHHHH
Q 019519 324 KPELKASIEKG 334 (340)
Q Consensus 324 ~~~l~~~~~~~ 334 (340)
..--+-.++.+
T Consensus 204 ~~~e~L~veAa 214 (232)
T PF11975_consen 204 KAYERLTVEAA 214 (232)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55554444444
No 128
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)). Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.
Probab=97.53 E-value=0.00058 Score=65.68 Aligned_cols=95 Identities=19% Similarity=0.368 Sum_probs=61.2
Q ss_pred eEEEEcCCCChHHHHHHHHHhCC------CcceEEEEeCCC---cHHHHHHHh--cCC--------CCceEEEEecCCcc
Q 019519 30 KVAVLGAAGGIGQPLALLMKLNP------LVSRLALYDIAN---TPGVAADVG--HIN--------TRSEVAGYMGNDQL 90 (340)
Q Consensus 30 KI~IiGaaG~VG~~~a~~l~~~~------~~~el~L~D~~~---~~~~~~dl~--~~~--------~~~~v~~~~~~~d~ 90 (340)
||+|||+ |..|.++|..|...+ +..+|.|+..++ .......+. |.. .+.++..+ +|+
T Consensus 1 kI~VIGa-G~wGtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~at---~dl 76 (342)
T TIGR03376 1 RVAVVGS-GNWGTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVAV---PDL 76 (342)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEEE---CCH
Confidence 7999998 999999999998866 123999998743 222222332 221 13345553 578
Q ss_pred ccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEe
Q 019519 91 GQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMI 144 (340)
Q Consensus 91 ~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~ 144 (340)
++++++||+||++. | ...++++++.+..+- ++..+|.+
T Consensus 77 ~eal~~ADiIIlAV--P--------------s~~i~~vl~~l~~~l~~~~~iVs~ 115 (342)
T TIGR03376 77 VEAAKGADILVFVI--P--------------HQFLEGICKQLKGHVKPNARAISC 115 (342)
T ss_pred HHHHhcCCEEEEEC--C--------------hHHHHHHHHHHHhhcCCCCEEEEE
Confidence 88999999999983 3 345555556665543 34445444
No 129
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=97.50 E-value=0.0005 Score=65.66 Aligned_cols=108 Identities=13% Similarity=0.011 Sum_probs=67.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc---HHHHHHHhcC--CCCceEEEEe----cCCccccccCC--
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PGVAADVGHI--NTRSEVAGYM----GNDQLGQALED-- 96 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~--~~~~~v~~~~----~~~d~~~al~~-- 96 (340)
.++|.|+||+|++|++++..|+..+. +|+++|.++. ......+... .....+.... ...++.+++++
T Consensus 6 ~~~vlVTGatGfiG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 83 (340)
T PLN02653 6 RKVALITGITGQDGSYLTEFLLSKGY--EVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIK 83 (340)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCC--EEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcC
Confidence 46899999999999999999998887 8999887531 1111111100 0011222211 11223344554
Q ss_pred CCEEEEcCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHHHhCC
Q 019519 97 SDVVIIPAGVPRKP-G-MTRDDLFNINAGIVKDLCSAIAKYCP 137 (340)
Q Consensus 97 aDiVi~~ag~~~~~-g-~~r~~~~~~N~~i~~~i~~~i~~~~p 137 (340)
.|+||++|+..... . ......+..|+.....+++.+.++..
T Consensus 84 ~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~ 126 (340)
T PLN02653 84 PDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQ 126 (340)
T ss_pred CCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhcc
Confidence 59999999864322 1 12334456788888999999988764
No 130
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=97.50 E-value=0.0007 Score=63.62 Aligned_cols=108 Identities=13% Similarity=0.134 Sum_probs=65.1
Q ss_pred EEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCc-ccccc-----CCCCEEEEcC
Q 019519 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQ-LGQAL-----EDSDVVIIPA 104 (340)
Q Consensus 31 I~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d-~~~al-----~~aDiVi~~a 104 (340)
|.|+||+|++|++++..|+..++ ..+.++|..........+.+.... .... ..+ +.+.+ .++|+||++|
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~-d~~~---~~~~~~~~~~~~~~~~~d~Vih~A 76 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGI-TDILVVDNLKDGTKFVNLVDLDIA-DYMD---KEDFLAQIMAGDDFGDIEAIFHEG 76 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCC-ceEEEecCCCcchHHHhhhhhhhh-hhhh---HHHHHHHHhcccccCCccEEEECc
Confidence 78999999999999999998875 346777875421110111111100 0000 011 11222 3799999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 105 GVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 105 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
+.+..........+..|.....++.+.+.+... .+|..|
T Consensus 77 ~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~--~~i~~S 115 (308)
T PRK11150 77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI--PFLYAS 115 (308)
T ss_pred eecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC--cEEEEc
Confidence 864333334455678899999999999987653 344443
No 131
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=97.48 E-value=0.00066 Score=65.36 Aligned_cols=110 Identities=20% Similarity=0.217 Sum_probs=73.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc-HHHHHHHhcCCCCceEEEEe----cCCccccccCCCCEEE
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT-PGVAADVGHINTRSEVAGYM----GNDQLGQALEDSDVVI 101 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~----~~~d~~~al~~aDiVi 101 (340)
++.++.|+||+||+|.+++..|...+...||.++|.... ...-.+.... ...+++... +..+...|+.++ .|+
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~-~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv 80 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF-RSGRVTVILGDLLDANSISNAFQGA-VVV 80 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc-cCCceeEEecchhhhhhhhhhccCc-eEE
Confidence 457999999999999999999998886679999998762 1111111110 112222221 123557889999 666
Q ss_pred EcCCCCC-CCCC-CHHHHHHHHHHHHHHHHHHHHHhCCC
Q 019519 102 IPAGVPR-KPGM-TRDDLFNINAGIVKDLCSAIAKYCPN 138 (340)
Q Consensus 102 ~~ag~~~-~~g~-~r~~~~~~N~~i~~~i~~~i~~~~p~ 138 (340)
+.+..+. ...+ .|......|+...+.+.+.+.+.+-+
T Consensus 81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~ 119 (361)
T KOG1430|consen 81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVK 119 (361)
T ss_pred EeccccCccccccchhhheeecchhHHHHHHHHHHhCCC
Confidence 6544332 2233 36667788999999999999988644
No 132
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=97.46 E-value=0.00019 Score=66.09 Aligned_cols=112 Identities=14% Similarity=0.070 Sum_probs=66.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~ 106 (340)
.++||+|+||+|||||+++-.|+..+. +|...|..-. +....++|....++.+..- .+-....++.+|-|+++|..
T Consensus 26 ~~lrI~itGgaGFIgSHLvdkLm~egh--~VIa~Dn~ft-g~k~n~~~~~~~~~fel~~-hdv~~pl~~evD~IyhLAap 101 (350)
T KOG1429|consen 26 QNLRILITGGAGFIGSHLVDKLMTEGH--EVIALDNYFT-GRKENLEHWIGHPNFELIR-HDVVEPLLKEVDQIYHLAAP 101 (350)
T ss_pred CCcEEEEecCcchHHHHHHHHHHhcCC--eEEEEecccc-cchhhcchhccCcceeEEE-eechhHHHHHhhhhhhhccC
Confidence 357999999999999999999999986 9999997542 2222334333222222111 11124568999999998864
Q ss_pred CCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEe
Q 019519 107 PRK--PGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 144 (340)
Q Consensus 107 ~~~--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~ 144 (340)
.-. +-.+..+.+.-|.-.........++.+ +.++.+
T Consensus 102 asp~~y~~npvktIktN~igtln~lglakrv~--aR~l~a 139 (350)
T KOG1429|consen 102 ASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLA 139 (350)
T ss_pred CCCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEe
Confidence 222 223333333444444444444444443 555544
No 133
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.43 E-value=0.0014 Score=63.76 Aligned_cols=76 Identities=25% Similarity=0.240 Sum_probs=50.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc-HHHHHHHhcCCC-CceEEEEecCCccccccCCCCEEEEcCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT-PGVAADVGHINT-RSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~-~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
|+||.|||| |+||+.++..|++.+. .+|.+.|.... ...+.+..+... ...+... +...+.+.+++.|+||.++.
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d-~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~-d~~al~~li~~~d~VIn~~p 77 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGD-GEVTIADRSKEKCARIAELIGGKVEALQVDAA-DVDALVALIKDFDLVINAAP 77 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCC-ceEEEEeCCHHHHHHHHhhccccceeEEeccc-ChHHHHHHHhcCCEEEEeCC
Confidence 579999998 9999999999998875 69999998742 222222221111 1122221 12345678899999999975
Q ss_pred C
Q 019519 106 V 106 (340)
Q Consensus 106 ~ 106 (340)
.
T Consensus 78 ~ 78 (389)
T COG1748 78 P 78 (389)
T ss_pred c
Confidence 4
No 134
>PRK12320 hypothetical protein; Provisional
Probab=97.43 E-value=0.0006 Score=71.21 Aligned_cols=101 Identities=15% Similarity=0.092 Sum_probs=65.4
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPR 108 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~~~ 108 (340)
|||.|+||+|++|++++..|...++ +|..+|..... ..+... ..+........+.+++.++|+||++++...
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~--~Vi~ldr~~~~-----~~~~~v-e~v~~Dl~d~~l~~al~~~D~VIHLAa~~~ 72 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGH--TVSGIAQHPHD-----ALDPRV-DYVCASLRNPVLQELAGEADAVIHLAPVDT 72 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC--EEEEEeCChhh-----cccCCc-eEEEccCCCHHHHHHhcCCCEEEEcCccCc
Confidence 5899999999999999999998887 89999965321 111110 012111111123455689999999987531
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 109 KPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 109 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
.. ....|+....++++.+++.+. .+|.+|
T Consensus 73 --~~----~~~vNv~Gt~nLleAA~~~Gv--RiV~~S 101 (699)
T PRK12320 73 --SA----PGGVGITGLAHVANAAARAGA--RLLFVS 101 (699)
T ss_pred --cc----hhhHHHHHHHHHHHHHHHcCC--eEEEEE
Confidence 11 114688888899998887654 455554
No 135
>PLN02686 cinnamoyl-CoA reductase
Probab=97.42 E-value=0.00078 Score=65.38 Aligned_cols=108 Identities=11% Similarity=0.129 Sum_probs=67.0
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcH-HHHHHHhcC---C-CCceEEEEe----cCCccccccCC
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP-GVAADVGHI---N-TRSEVAGYM----GNDQLGQALED 96 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~-~~~~dl~~~---~-~~~~v~~~~----~~~d~~~al~~ 96 (340)
+++++|.|+||+|++|++++..|+..++ +|+++..+... ....++... . ....+.... ...++.+++++
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~--~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~ 128 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGY--SVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG 128 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh
Confidence 4467999999999999999999999887 88775544311 111122110 0 001222211 11234567889
Q ss_pred CCEEEEcCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHHHh
Q 019519 97 SDVVIIPAGVPRKPGM--TRDDLFNINAGIVKDLCSAIAKY 135 (340)
Q Consensus 97 aDiVi~~ag~~~~~g~--~r~~~~~~N~~i~~~i~~~i~~~ 135 (340)
+|.|+++++.....+. ....+...|....+.+.+.+.+.
T Consensus 129 ~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~ 169 (367)
T PLN02686 129 CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRT 169 (367)
T ss_pred ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhc
Confidence 9999998875322221 12344567889999999998875
No 136
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=97.40 E-value=0.0019 Score=63.29 Aligned_cols=114 Identities=19% Similarity=0.109 Sum_probs=68.3
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHH----HHHHHhcCCCCc-eEEEEe-cCCccccccC----
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG----VAADVGHINTRS-EVAGYM-GNDQLGQALE---- 95 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~----~~~dl~~~~~~~-~v~~~~-~~~d~~~al~---- 95 (340)
.+.+||.|+||+|++|++++..|+..++ +|++++.+.... ...++....... .+.... +..++.++++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~ 135 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGY--NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGD 135 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCC
Confidence 4567999999999999999999998887 899998764110 111111111011 122211 1123445555
Q ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 96 DSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 96 ~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
++|+||++++.+.... .+.+..|......+.+.+++.+-. .++++|
T Consensus 136 ~~D~Vi~~aa~~~~~~---~~~~~vn~~~~~~ll~aa~~~gv~-r~V~iS 181 (390)
T PLN02657 136 PVDVVVSCLASRTGGV---KDSWKIDYQATKNSLDAGREVGAK-HFVLLS 181 (390)
T ss_pred CCcEEEECCccCCCCC---ccchhhHHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 5999999876432111 123456777788888888776543 344444
No 137
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=97.38 E-value=0.00074 Score=62.61 Aligned_cols=95 Identities=21% Similarity=0.270 Sum_probs=66.2
Q ss_pred eEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCC--CEEEEcCCCC
Q 019519 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDS--DVVIIPAGVP 107 (340)
Q Consensus 30 KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~a--DiVi~~ag~~ 107 (340)
||.|+||+|++|++++..|...++ ++++++... .|+.+ ..++.++++++ |+||++++..
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~--~v~~~~r~~-----~d~~~------------~~~~~~~~~~~~~d~vi~~a~~~ 61 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGR--VVVALTSSQ-----LDLTD------------PEALERLLRAIRPDAVVNTAAYT 61 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCC--EEEEeCCcc-----cCCCC------------HHHHHHHHHhCCCCEEEECCccc
Confidence 689999999999999999998887 888887531 11111 12334556655 9999999864
Q ss_pred CCCC--CCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 108 RKPG--MTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 108 ~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
.... ......+..|......+++.+.+... .+|++|
T Consensus 62 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~v~~S 99 (287)
T TIGR01214 62 DVDGAESDPEKAFAVNALAPQNLARAAARHGA--RLVHIS 99 (287)
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Confidence 3221 23455678899999999999887643 455444
No 138
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=97.36 E-value=0.00081 Score=63.84 Aligned_cols=117 Identities=16% Similarity=0.281 Sum_probs=69.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHH---HhcCCCCc---eEEEEecCCccccccCCCCEE
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAAD---VGHINTRS---EVAGYMGNDQLGQALEDSDVV 100 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~d---l~~~~~~~---~v~~~~~~~d~~~al~~aDiV 100 (340)
.+|||+|+|+ |.+|..++..|...++ ++.+++.+..+..... +....... .+... ++ .++...+|+|
T Consensus 4 ~~m~I~IiG~-GaiG~~lA~~L~~~g~--~V~~~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~-~~~~~~~D~v 76 (313)
T PRK06249 4 ETPRIGIIGT-GAIGGFYGAMLARAGF--DVHFLLRSDYEAVRENGLQVDSVHGDFHLPPVQAY---RS-AEDMPPCDWV 76 (313)
T ss_pred cCcEEEEECC-CHHHHHHHHHHHHCCC--eEEEEEeCCHHHHHhCCeEEEeCCCCeeecCceEE---cc-hhhcCCCCEE
Confidence 3589999998 9999999999998887 8999988652211110 00000000 11121 22 2356789999
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec
Q 019519 101 IIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKY-CPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV 173 (340)
Q Consensus 101 i~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~ 173 (340)
|++.-.. + . .+.++.+... .|++.++...|=.+..-.+. +. +|++++++-
T Consensus 77 ilavK~~----~--------~----~~~~~~l~~~~~~~~~iv~lqNG~~~~e~l~----~~---~~~~~v~~g 127 (313)
T PRK06249 77 LVGLKTT----A--------N----ALLAPLIPQVAAPDAKVLLLQNGLGVEEQLR----EI---LPAEHLLGG 127 (313)
T ss_pred EEEecCC----C--------h----HhHHHHHhhhcCCCCEEEEecCCCCcHHHHH----HH---CCCCcEEEE
Confidence 9985211 1 1 2233333333 37888888888877544332 22 677787754
No 139
>PRK08269 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.35 E-value=0.0012 Score=62.79 Aligned_cols=112 Identities=15% Similarity=0.165 Sum_probs=73.9
Q ss_pred hHHHHHHHHHhCCCcceEEEEeCCCc--H--------HH--HHH----HhcCC---------CCceEEEEecCCcccccc
Q 019519 40 IGQPLALLMKLNPLVSRLALYDIANT--P--------GV--AAD----VGHIN---------TRSEVAGYMGNDQLGQAL 94 (340)
Q Consensus 40 VG~~~a~~l~~~~~~~el~L~D~~~~--~--------~~--~~d----l~~~~---------~~~~v~~~~~~~d~~~al 94 (340)
+|+.+|..++..|+ +|+|+|.++. . +. ..+ +.... ...+++..+ +.|.++++
T Consensus 1 MG~giA~~~a~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~~a~ 77 (314)
T PRK08269 1 MGQGIALAFAFAGH--DVTLIDFKPRDAAGWRALDAEARAEIERTLAALVALGRIDAAQADAVLARIAVVA-RDGAADAL 77 (314)
T ss_pred CcHHHHHHHHhCCC--eEEEEeCCcccchhhHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEeec-CcchHHHh
Confidence 46888999998898 9999999861 1 11 001 11100 123566542 12456889
Q ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec
Q 019519 95 EDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCP-NAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV 173 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~ 173 (340)
++||+||.+. .+|..+.+.+..++.+.++ ++++ .||.......-+ .... -.|+|++|+
T Consensus 78 ~~aD~ViEav--------------~E~~~~K~~~f~~l~~~~~~~~il--aSntS~~~~~~l---a~~~--~~p~r~~g~ 136 (314)
T PRK08269 78 ADADLVFEAV--------------PEVLDAKREALRWLGRHVDADAII--ASTTSTFLVTDL---QRHV--AHPERFLNA 136 (314)
T ss_pred ccCCEEEECC--------------cCCHHHHHHHHHHHHhhCCCCcEE--EEccccCCHHHH---Hhhc--CCcccEEEE
Confidence 9999999986 4788999999999999984 6655 888877544332 2233 246788888
Q ss_pred cc
Q 019519 174 TT 175 (340)
Q Consensus 174 ~~ 175 (340)
+.
T Consensus 137 Hf 138 (314)
T PRK08269 137 HW 138 (314)
T ss_pred ec
Confidence 64
No 140
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=97.34 E-value=0.0012 Score=61.82 Aligned_cols=109 Identities=14% Similarity=0.107 Sum_probs=66.5
Q ss_pred EEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccc----cCCCCEEEEcCCC
Q 019519 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQA----LEDSDVVIIPAGV 106 (340)
Q Consensus 31 I~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a----l~~aDiVi~~ag~ 106 (340)
|.|+||+|++|++++..|...+. .+++++|..........+........+.. ...++.. +.++|+||++|+.
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~~~~~D~vvh~A~~ 76 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGI-TDILVVDNLRDGHKFLNLADLVIADYIDK---EDFLDRLEKGAFGKIEAIFHQGAC 76 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCC-ceEEEEecCCCchhhhhhhheeeeccCcc---hhHHHHHHhhccCCCCEEEECccc
Confidence 57999999999999999998874 26888886542111111111000001110 0111121 2489999999986
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 107 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
+..........+..|+.....+++.+.+... .+|.+|
T Consensus 77 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~--~~v~~S 113 (314)
T TIGR02197 77 SDTTETDGEYMMENNYQYSKRLLDWCAEKGI--PFIYAS 113 (314)
T ss_pred cCccccchHHHHHHHHHHHHHHHHHHHHhCC--cEEEEc
Confidence 5322334456678899999999999987753 345444
No 141
>PLN02253 xanthoxin dehydrogenase
Probab=97.33 E-value=0.0055 Score=56.61 Aligned_cols=148 Identities=16% Similarity=0.234 Sum_probs=80.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCc---cccccC----
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQ---LGQALE---- 95 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al~---- 95 (340)
++.+++.|+||+|.+|++++..|+..|. +|+++|.++. .....++.. ..++.... +-+| ..++++
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~ 90 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKHGA--KVCIVDLQDDLGQNVCDSLGG---EPNVCFFHCDVTVEDDVSRAVDFTVD 90 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhcC---CCceEEEEeecCCHHHHHHHHHHHHH
Confidence 3456899999999999999999998887 8999998652 222223321 11222211 1122 222222
Q ss_pred ---CCCEEEEcCCCCCCC-----CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEecCCCCccHHHHHHHHHH
Q 019519 96 ---DSDVVIIPAGVPRKP-----GMT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISNPVNSTVPIAAEVFKK 161 (340)
Q Consensus 96 ---~aDiVi~~ag~~~~~-----g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP~d~~t~~~~~~~~~ 161 (340)
..|++|+.+|..... ..+ -...+..|+.-...+.+.+..+ ...+.+++++.....
T Consensus 91 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~----------- 159 (280)
T PLN02253 91 KFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASA----------- 159 (280)
T ss_pred HhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhc-----------
Confidence 689999999864321 112 2334556655444444433322 134566666543321
Q ss_pred hCCCCCCceEeccchhHHHHHHHHHHHcC
Q 019519 162 AGTYNEKKLFGVTTLDVVRAKTFYAGKAN 190 (340)
Q Consensus 162 sg~~~~~kviG~~~ld~~R~~~~la~~l~ 190 (340)
.+ .+....+|.+......+-+.+++.++
T Consensus 160 ~~-~~~~~~Y~~sK~a~~~~~~~la~e~~ 187 (280)
T PLN02253 160 IG-GLGPHAYTGSKHAVLGLTRSVAAELG 187 (280)
T ss_pred cc-CCCCcccHHHHHHHHHHHHHHHHHhh
Confidence 11 22223556543333456666777764
No 142
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.29 E-value=0.0017 Score=59.05 Aligned_cols=116 Identities=18% Similarity=0.255 Sum_probs=68.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCCcc---ccc-------
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GNDQL---GQA------- 93 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~d~---~~a------- 93 (340)
+.+++.|+||+|.+|++++..|+..+. +|++++.++ ......++.+.. .++.... +-+|. .++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA--AVAIADLNQDGANAVADEINKAG--GKAIGVAMDVTNEDAVNAGIDKVAER 81 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHhcC--ceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 346899999999999999999999887 899999876 222233343322 1222221 11221 112
Q ss_pred cCCCCEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHHhCCCcEEEEecC
Q 019519 94 LEDSDVVIIPAGVPRKP---GMT---RDDLFNINAGI----VKDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 94 l~~aDiVi~~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN 146 (340)
+.+.|+||+++|..... ..+ ....+..|..- .+.+.+.+.+.++.+.++++|.
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss 144 (262)
T PRK13394 82 FGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGS 144 (262)
T ss_pred cCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcc
Confidence 23489999999864211 111 22344456655 6666666633344455665553
No 143
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=97.29 E-value=0.00035 Score=62.44 Aligned_cols=166 Identities=18% Similarity=0.168 Sum_probs=90.4
Q ss_pred EEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC-cHHHHHHHhcCCCCceEEEE-ecCCccccccCCC--CEEEEcCCC
Q 019519 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-TPGVAADVGHINTRSEVAGY-MGNDQLGQALEDS--DVVIIPAGV 106 (340)
Q Consensus 31 I~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~-~~~~d~~~al~~a--DiVi~~ag~ 106 (340)
|.|+||+|++|++++..|+..+. +++-+.... ............ .+... ....++.+.+++. |.||++|+.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~---~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGH--EVIVLSRSSNSESFEEKKLNVE---FVIGDLTDKEQLEKLLEKANIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTT--EEEEEESCSTGGHHHHHHTTEE---EEESETTSHHHHHHHHHHHTESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCC--ccccccccccccccccccceEE---EEEeeccccccccccccccCceEEEEeecc
Confidence 78999999999999999999987 555444433 222221111100 01110 0112445666766 999999986
Q ss_pred CC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHHH-HhCCCCCCceEeccchhHHHHHH
Q 019519 107 PR--KPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFK-KAGTYNEKKLFGVTTLDVVRAKT 183 (340)
Q Consensus 107 ~~--~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~-~sg~~~~~kviG~~~ld~~R~~~ 183 (340)
+. .......+.+..|+...+.+.+.+.+... ..++..+. ..+.......... .+. +.+...+|.+.....++..
T Consensus 76 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~i~~sS-~~~y~~~~~~~~~e~~~-~~~~~~Y~~~K~~~e~~~~ 152 (236)
T PF01370_consen 76 SSNPESFEDPEEIIEANVQGTRNLLEAAREAGV-KRFIFLSS-ASVYGDPDGEPIDEDSP-INPLSPYGASKRAAEELLR 152 (236)
T ss_dssp SSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT-SEEEEEEE-GGGGTSSSSSSBETTSG-CCHSSHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccc-cccccccc-ccccccccccccccccc-ccccccccccccccccccc
Confidence 53 11134567788999999999999999876 34554443 2110000000000 000 1122234444333344555
Q ss_pred HHHHHcCCCCCCCce-eEEEec
Q 019519 184 FYAGKANVNVAEVNV-PVVGGH 204 (340)
Q Consensus 184 ~la~~l~v~~~~v~~-~v~G~h 204 (340)
.+.++.+++...++. .++|.+
T Consensus 153 ~~~~~~~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 153 DYAKKYGLRVTILRPPNVYGPG 174 (236)
T ss_dssp HHHHHHTSEEEEEEESEEESTT
T ss_pred cccccccccccccccccccccc
Confidence 556666776666654 356655
No 144
>PRK05875 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.0076 Score=55.50 Aligned_cols=119 Identities=15% Similarity=0.109 Sum_probs=67.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCCc---cccccC----
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GNDQ---LGQALE---- 95 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al~---- 95 (340)
++.++|.|+||+|.+|+.++..|+..+. +|++++.+. ......++.......++.... +-+| ..+.++
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGA--AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA 82 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4457999999999999999999999887 899999765 222233333211111222221 1112 122222
Q ss_pred ---CCCEEEEcCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCcEEEEecC
Q 019519 96 ---DSDVVIIPAGVPRKP----GMTR---DDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (340)
Q Consensus 96 ---~aDiVi~~ag~~~~~----g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 146 (340)
..|++|+.+|..... ..+. ...+..|......+.+.+.++ ...+.++++|.
T Consensus 83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS 146 (276)
T PRK05875 83 WHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISS 146 (276)
T ss_pred HcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEec
Confidence 679999998853211 1222 233445666665555544332 23456666654
No 145
>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional
Probab=97.29 E-value=0.0034 Score=62.29 Aligned_cols=111 Identities=14% Similarity=0.162 Sum_probs=65.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCC------------CceEEEEecCCcccccc
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINT------------RSEVAGYMGNDQLGQAL 94 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~------------~~~v~~~~~~~d~~~al 94 (340)
++|||+|||. |.||..+|..|+. ++ +++.||+++.+ +..|..... ...+..+ ++. +++
T Consensus 5 ~~mkI~vIGl-GyvGlpmA~~la~-~~--~V~g~D~~~~~--ve~l~~G~~~~~e~~~~~l~~~g~l~~t---~~~-~~~ 74 (425)
T PRK15182 5 DEVKIAIIGL-GYVGLPLAVEFGK-SR--QVVGFDVNKKR--ILELKNGVDVNLETTEEELREARYLKFT---SEI-EKI 74 (425)
T ss_pred CCCeEEEECc-CcchHHHHHHHhc-CC--EEEEEeCCHHH--HHHHHCcCCCCCCCCHHHHHhhCCeeEE---eCH-HHH
Confidence 3589999997 9999999998876 45 99999998622 223332110 0123332 343 568
Q ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEE-ecCCCCccHH
Q 019519 95 EDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNM-ISNPVNSTVP 153 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv-~tNP~d~~t~ 153 (340)
++||++|++.+.|.+.+.. .++.-+....+.|.++. +..++|+ .|-|.+....
T Consensus 75 ~~advvii~Vptp~~~~~~------~dl~~v~~a~~~i~~~l~~g~lVI~~STv~pgtt~~ 129 (425)
T PRK15182 75 KECNFYIITVPTPINTYKQ------PDLTPLIKASETVGTVLNRGDIVVYESTVYPGCTEE 129 (425)
T ss_pred cCCCEEEEEcCCCCCCCCC------cchHHHHHHHHHHHHhcCCCCEEEEecCCCCcchHH
Confidence 9999999998887543211 12233333344444444 3333333 4666655443
No 146
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.29 E-value=0.0026 Score=57.95 Aligned_cols=70 Identities=10% Similarity=0.194 Sum_probs=45.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCC--cceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPL--VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~--~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
+.+||+|||+ |.+|.+++..+...+. ..+++.++.+.. ....++.+.. .+..+ .|+++.++++|+||++.
T Consensus 3 ~~~kI~iIG~-G~mg~ala~~l~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~---~~~~~---~~~~~~~~~~DiViiav 74 (245)
T PRK07634 3 KKHRILFIGA-GRMAEAIFSGLLKTSKEYIEEIIVSNRSNV-EKLDQLQARY---NVSTT---TDWKQHVTSVDTIVLAM 74 (245)
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhCCCCCcCeEEEECCCCH-HHHHHHHHHc---CcEEe---CChHHHHhcCCEEEEec
Confidence 4579999997 9999999998877652 345777775421 1122233211 12222 35567789999999984
No 147
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=97.28 E-value=0.0023 Score=59.57 Aligned_cols=161 Identities=16% Similarity=0.077 Sum_probs=93.7
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC-c--HHHHHHHhcCCCCceEEEEec-CCccccccC--CCCEEEE
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-T--PGVAADVGHINTRSEVAGYMG-NDQLGQALE--DSDVVII 102 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~-~--~~~~~dl~~~~~~~~v~~~~~-~~d~~~al~--~aDiVi~ 102 (340)
|+|.|+|+|||+|+++...+.....-.+|+.+|.-. + .....++.+.+....+++... ...+.+.++ +.|.|++
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 589999999999999998777665445789999765 2 222334554432223333321 112224455 6899999
Q ss_pred cCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEE-EecCCCC-ccHH---HHHHHHHHhCCCCCCceEeccc
Q 019519 103 PAGVPRKP--GMTRDDLFNINAGIVKDLCSAIAKYCPNAIVN-MISNPVN-STVP---IAAEVFKKAGTYNEKKLFGVTT 175 (340)
Q Consensus 103 ~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~vi-v~tNP~d-~~t~---~~~~~~~~sg~~~~~kviG~~~ 175 (340)
.|.-..-. =.....+++-|+-....+.++++++...-.++ +.|.-|= -+.. .+ -..++ +.|+.-+.-+.
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~F---tE~tp-~~PsSPYSASK 156 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAF---TETTP-YNPSSPYSASK 156 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCc---ccCCC-CCCCCCcchhh
Confidence 87543211 12357788999999999999999997542333 3333220 0000 11 12334 66666665532
Q ss_pred hhHHHHHHHHHHHcCCCC
Q 019519 176 LDVVRAKTFYAGKANVNV 193 (340)
Q Consensus 176 ld~~R~~~~la~~l~v~~ 193 (340)
-.+--|-+...+.+|++.
T Consensus 157 AasD~lVray~~TYglp~ 174 (340)
T COG1088 157 AASDLLVRAYVRTYGLPA 174 (340)
T ss_pred hhHHHHHHHHHHHcCCce
Confidence 112224555567777754
No 148
>PRK05865 hypothetical protein; Provisional
Probab=97.28 E-value=0.0016 Score=69.59 Aligned_cols=104 Identities=18% Similarity=0.128 Sum_probs=70.7
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEe-cCCccccccCCCCEEEEcCCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-GNDQLGQALEDSDVVIIPAGVP 107 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~~~d~~~al~~aDiVi~~ag~~ 107 (340)
|||.|+||+|++|++++..|+..++ +|+.+|.+.... +.. .. ..+.... ...++.++++++|+||++|+..
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~--~Vv~l~R~~~~~----~~~-~v-~~v~gDL~D~~~l~~al~~vD~VVHlAa~~ 72 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGH--EVVGIARHRPDS----WPS-SA-DFIAADIRDATAVESAMTGADVVAHCAWVR 72 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcC--EEEEEECCchhh----ccc-Cc-eEEEeeCCCHHHHHHHHhCCCEEEECCCcc
Confidence 5899999999999999999998887 899998753211 110 10 1122211 1234456788999999998753
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCC
Q 019519 108 RKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPV 148 (340)
Q Consensus 108 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~ 148 (340)
.. ....|+.....+++.+++.+.. .+|++|.+.
T Consensus 73 ~~-------~~~vNv~GT~nLLeAa~~~gvk-r~V~iSS~~ 105 (854)
T PRK05865 73 GR-------NDHINIDGTANVLKAMAETGTG-RIVFTSSGH 105 (854)
T ss_pred cc-------hHHHHHHHHHHHHHHHHHcCCC-eEEEECCcH
Confidence 21 3467888888999988876543 566666654
No 149
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.25 E-value=0.0028 Score=57.91 Aligned_cols=116 Identities=29% Similarity=0.328 Sum_probs=65.2
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcH--HHHHHHhcCCCCceEEEEe-cCCcccccc--------CCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGYM-GNDQLGQAL--------EDS 97 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~--~~~~dl~~~~~~~~v~~~~-~~~d~~~al--------~~a 97 (340)
+++.|+||+|.+|+.++..|+..+. +|+++|.+... ....++..... .-+.... ...+..+++ ...
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW--RVGAYDINEAGLAALAAELGAGNA-WTGALDVTDRAAWDAALADFAAATGGRL 78 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhcCCce-EEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 4799999999999999999998887 89999976521 11122221110 0111110 111222222 345
Q ss_pred CEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHHH---hCCCcEEEEecCC
Q 019519 98 DVVIIPAGVPRKPG---MT---RDDLFNINAGIVKDLCSAIAK---YCPNAIVNMISNP 147 (340)
Q Consensus 98 DiVi~~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~---~~p~a~viv~tNP 147 (340)
|+||+++|...... .+ -...+..|..-...+.+.+.+ ..+.+.+++++..
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~ 137 (260)
T PRK08267 79 DVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSA 137 (260)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCch
Confidence 99999998753221 12 234556677655555555432 2344566666544
No 150
>PRK07680 late competence protein ComER; Validated
Probab=97.18 E-value=0.003 Score=58.72 Aligned_cols=97 Identities=15% Similarity=0.212 Sum_probs=62.2
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCC--cceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPL--VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~--~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~ 106 (340)
|||+|||+ |.+|+.++..|...+. ..++.++|.+... ...+.+.. ..+... .+..+.++++|+||++.-
T Consensus 1 m~I~iIG~-G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~--~~~~~~~~--~g~~~~---~~~~~~~~~aDiVilav~- 71 (273)
T PRK07680 1 MNIGFIGT-GNMGTILIEAFLESGAVKPSQLTITNRTPAK--AYHIKERY--PGIHVA---KTIEEVISQSDLIFICVK- 71 (273)
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCHHH--HHHHHHHc--CCeEEE---CCHHHHHHhCCEEEEecC-
Confidence 58999997 9999999999887773 2479999986522 12222211 123322 244566899999999851
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecCCCC
Q 019519 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVN 149 (340)
Q Consensus 107 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d 149 (340)
| ..+.++++.+..+- ++.+|+.++|++.
T Consensus 72 p---------------~~~~~vl~~l~~~l~~~~~iis~~ag~~ 100 (273)
T PRK07680 72 P---------------LDIYPLLQKLAPHLTDEHCLVSITSPIS 100 (273)
T ss_pred H---------------HHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 1 22334445554443 5678888888774
No 151
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.17 E-value=0.0023 Score=59.14 Aligned_cols=96 Identities=15% Similarity=0.235 Sum_probs=60.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCC-cceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPL-VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~ 106 (340)
||||+|||+ |.+|+.++..+...+. ..++.++|.++.. ...+.+.. .+... .+..+.+++||+||++.
T Consensus 2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~--~~~~~~~~---g~~~~---~~~~~~~~~advVil~v-- 70 (267)
T PRK11880 2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEK--RAALAEEY---GVRAA---TDNQEAAQEADVVVLAV-- 70 (267)
T ss_pred CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHH--HHHHHHhc---CCeec---CChHHHHhcCCEEEEEc--
Confidence 579999998 9999999998887762 2478999987522 12222211 12221 34456688999999985
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCC
Q 019519 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVN 149 (340)
Q Consensus 107 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d 149 (340)
| ...++++++.+..+. +..|+.++|-+.
T Consensus 71 ~--------------~~~~~~v~~~l~~~~-~~~vvs~~~gi~ 98 (267)
T PRK11880 71 K--------------PQVMEEVLSELKGQL-DKLVVSIAAGVT 98 (267)
T ss_pred C--------------HHHHHHHHHHHHhhc-CCEEEEecCCCC
Confidence 1 223445555555443 456777777653
No 152
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=97.16 E-value=0.0037 Score=58.99 Aligned_cols=95 Identities=20% Similarity=0.229 Sum_probs=60.0
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPR 108 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~~~ 108 (340)
|||+|||. |.+|++++..|...++ +|.++|.++.. ...+..... .......++.+.++++|+|+++. |
T Consensus 1 M~Ig~IGl-G~mG~~la~~L~~~g~--~V~~~dr~~~~--~~~l~~~g~----~~~~s~~~~~~~~~~~dvIi~~v--p- 68 (298)
T TIGR00872 1 MQLGLIGL-GRMGANIVRRLAKRGH--DCVGYDHDQDA--VKAMKEDRT----TGVANLRELSQRLSAPRVVWVMV--P- 68 (298)
T ss_pred CEEEEEcc-hHHHHHHHHHHHHCCC--EEEEEECCHHH--HHHHHHcCC----cccCCHHHHHhhcCCCCEEEEEc--C-
Confidence 58999998 9999999999998887 89999987522 222332211 11111123334567899999984 2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecCCC
Q 019519 109 KPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPV 148 (340)
Q Consensus 109 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~ 148 (340)
+- .++++++.+.... ++.++|..||..
T Consensus 69 ------------~~-~~~~v~~~l~~~l~~g~ivid~st~~ 96 (298)
T TIGR00872 69 ------------HG-IVDAVLEELAPTLEKGDIVIDGGNSY 96 (298)
T ss_pred ------------ch-HHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 11 3444444555444 567787777764
No 153
>PRK05717 oxidoreductase; Validated
Probab=97.15 E-value=0.0033 Score=57.28 Aligned_cols=154 Identities=15% Similarity=0.163 Sum_probs=83.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEe-cCCcc---ccc-------cCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-GNDQL---GQA-------LED 96 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~~~d~---~~a-------l~~ 96 (340)
.++|.|+||+|++|++++..|+..+. +++++|.++...... ..+.. .++.... +-+|. .++ +..
T Consensus 10 ~k~vlItG~sg~IG~~~a~~l~~~g~--~v~~~~~~~~~~~~~-~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 84 (255)
T PRK05717 10 GRVALVTGAARGIGLGIAAWLIAEGW--QVVLADLDRERGSKV-AKALG--ENAWFIAMDVADEAQVAAGVAEVLGQFGR 84 (255)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCC--EEEEEcCCHHHHHHH-HHHcC--CceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 35899999999999999999998886 899999765222111 11111 1111111 11121 111 134
Q ss_pred CCEEEEcCCCCCCC-----CCC---HHHHHHHHHHHHHHHHHHHHHh--CCCcEEEEecCCCCccHHHHHHHHHHhCCCC
Q 019519 97 SDVVIIPAGVPRKP-----GMT---RDDLFNINAGIVKDLCSAIAKY--CPNAIVNMISNPVNSTVPIAAEVFKKAGTYN 166 (340)
Q Consensus 97 aDiVi~~ag~~~~~-----g~~---r~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~ 166 (340)
.|++|+.+|..... ..+ -...+..|..-...+.+.+..+ ...+.+|++|..... .+ .+
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~-----------~~-~~ 152 (255)
T PRK05717 85 LDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRAR-----------QS-EP 152 (255)
T ss_pred CCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhc-----------CC-CC
Confidence 79999999865321 112 2345567777777777666543 234566666643321 11 22
Q ss_pred CCceEeccchhHHHHHHHHHHHcCCCCCCCceeEE
Q 019519 167 EKKLFGVTTLDVVRAKTFYAGKANVNVAEVNVPVV 201 (340)
Q Consensus 167 ~~kviG~~~ld~~R~~~~la~~l~v~~~~v~~~v~ 201 (340)
..-.+|.+......+...+++.++- .+++..+
T Consensus 153 ~~~~Y~~sKaa~~~~~~~la~~~~~---~i~v~~i 184 (255)
T PRK05717 153 DTEAYAASKGGLLALTHALAISLGP---EIRVNAV 184 (255)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhcC---CCEEEEE
Confidence 2334555432223456667777652 2554444
No 154
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.14 E-value=0.0026 Score=61.03 Aligned_cols=97 Identities=24% Similarity=0.344 Sum_probs=63.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
..+|.|+||+|++|+.++..|....-+.+|++++.++. ...+.++.+ ..+ .++++++.++|+||++++
T Consensus 155 ~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~----~~i------~~l~~~l~~aDiVv~~ts 224 (340)
T PRK14982 155 KATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG----GKI------LSLEEALPEADIVVWVAS 224 (340)
T ss_pred CCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc----ccH------HhHHHHHccCCEEEECCc
Confidence 46999999989999999999875432458999987642 222222221 111 245688999999999998
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccH
Q 019519 106 VPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTV 152 (340)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t 152 (340)
.+...-.+..++ .+..+++=++.|=|+-.
T Consensus 225 ~~~~~~I~~~~l------------------~~~~~viDiAvPRDVd~ 253 (340)
T PRK14982 225 MPKGVEIDPETL------------------KKPCLMIDGGYPKNLDT 253 (340)
T ss_pred CCcCCcCCHHHh------------------CCCeEEEEecCCCCCCc
Confidence 764211222111 35678888898877643
No 155
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=97.14 E-value=0.0046 Score=54.99 Aligned_cols=35 Identities=29% Similarity=0.518 Sum_probs=31.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIA 63 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~ 63 (340)
+..||+|+|+ |.+|+.++..|+..|+ .+|+|+|.+
T Consensus 20 ~~~~V~IvG~-GglGs~ia~~La~~Gv-g~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGL-GGLGSNVAINLARAGI-GKLILVDFD 54 (200)
T ss_pred hCCcEEEECc-CHHHHHHHHHHHHcCC-CEEEEECCC
Confidence 3469999998 9999999999998885 589999998
No 156
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.14 E-value=0.01 Score=53.95 Aligned_cols=116 Identities=17% Similarity=0.178 Sum_probs=68.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCc---cccc-------c
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQ---LGQA-------L 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l 94 (340)
..+|.|+||+|.+|+.++..|+..|. +|++.|.++. .....++.+.. .++.... +-+| +.++ +
T Consensus 10 ~k~vlItGa~g~iG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~i~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 10 GRRALVTGSSQGIGYALAEGLAQAGA--EVILNGRDPAKLAAAAESLKGQG--LSAHALAFDVTDHDAVRAAIDAFEAEI 85 (255)
T ss_pred CCEEEEECCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC--ceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 46999999999999999999998887 8999998762 22222333221 1222221 1112 1122 2
Q ss_pred CCCCEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHHhC---CCcEEEEecCC
Q 019519 95 EDSDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAIAKYC---PNAIVNMISNP 147 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tNP 147 (340)
...|+||+.+|..... ..+ -...+..|+.....+.+.+.++. ..+.++++|..
T Consensus 86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~ 147 (255)
T PRK07523 86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASV 147 (255)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccc
Confidence 3579999999864211 112 23345567665555555555442 34566766654
No 157
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=97.12 E-value=0.0031 Score=59.05 Aligned_cols=106 Identities=19% Similarity=0.107 Sum_probs=66.0
Q ss_pred eEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc-HH-HHHHHhcCCCCceEEEEe-cC---CccccccC--CCCEEE
Q 019519 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT-PG-VAADVGHINTRSEVAGYM-GN---DQLGQALE--DSDVVI 101 (340)
Q Consensus 30 KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~-~~-~~~dl~~~~~~~~v~~~~-~~---~d~~~al~--~aDiVi 101 (340)
||.|+||+|++|+.++..|...+. +++++|.... .. ....+.+.. .+.... +- .++.++++ +.|+||
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~--~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~d~vv 75 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGH--EVVVLDNLSNGSPEALKRGERIT---RVTFVEGDLRDRELLDRLFEEHKIDAVI 75 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCC--eEEEEeCCCccchhhhhhhcccc---ceEEEECCCCCHHHHHHHHHhCCCcEEE
Confidence 689999999999999999998887 7888875431 11 111111110 122211 11 22333443 689999
Q ss_pred EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCcE
Q 019519 102 IPAGVPRKP--GMTRDDLFNINAGIVKDLCSAIAKYCPNAI 140 (340)
Q Consensus 102 ~~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~ 140 (340)
+++|..... .....+.+..|+.....+++.+.+.....+
T Consensus 76 ~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 116 (328)
T TIGR01179 76 HFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKF 116 (328)
T ss_pred ECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEE
Confidence 999864322 123345667899999999998887654433
No 158
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.11 E-value=0.0047 Score=57.62 Aligned_cols=71 Identities=14% Similarity=0.246 Sum_probs=47.3
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCC--cceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEc
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPL--VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIP 103 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~--~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ 103 (340)
|..|||+|||+ |.+|++++..|+..+. ..+|.++|.+.. ....++.... .+... .+..+++++||+||++
T Consensus 1 ~~~mkI~~IG~-G~mG~aia~~l~~~g~~~~~~v~v~~r~~~-~~~~~l~~~~---g~~~~---~~~~e~~~~aDvVila 72 (279)
T PRK07679 1 MSIQNISFLGA-GSIAEAIIGGLLHANVVKGEQITVSNRSNE-TRLQELHQKY---GVKGT---HNKKELLTDANILFLA 72 (279)
T ss_pred CCCCEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCCH-HHHHHHHHhc---CceEe---CCHHHHHhcCCEEEEE
Confidence 34579999997 9999999999988762 247889987531 1222332211 12222 2345678899999998
Q ss_pred C
Q 019519 104 A 104 (340)
Q Consensus 104 a 104 (340)
.
T Consensus 73 v 73 (279)
T PRK07679 73 M 73 (279)
T ss_pred e
Confidence 5
No 159
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.0064 Score=54.46 Aligned_cols=115 Identities=19% Similarity=0.184 Sum_probs=65.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCc---ccccc-------
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQ---LGQAL------- 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al------- 94 (340)
.++|.|+||+|.+|+.++..|+..+. +|++++.++. .....++... .++..+. +-+| +.+.+
T Consensus 6 ~~~ilItGatg~iG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (237)
T PRK07326 6 GKVALITGGSKGIGFAIAEALLAEGY--KVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVAAF 80 (237)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC--EEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 36899999999999999999988877 8999998752 2222334322 1222221 1111 12222
Q ss_pred CCCCEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHHHh--CCCcEEEEecCC
Q 019519 95 EDSDVVIIPAGVPRKP---GMTRD---DLFNINAGIVKDLCSAIAKY--CPNAIVNMISNP 147 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~---g~~r~---~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tNP 147 (340)
..+|+||+.+|..... ..+.. +.+..|+.....+.+.+.+. ...+.++++|..
T Consensus 81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~ 141 (237)
T PRK07326 81 GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSL 141 (237)
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECCh
Confidence 3799999998764321 12222 33455655444444444332 234566666654
No 160
>PRK07069 short chain dehydrogenase; Validated
Probab=97.10 E-value=0.026 Score=50.87 Aligned_cols=115 Identities=21% Similarity=0.198 Sum_probs=67.0
Q ss_pred eEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCC-C--cHHHHHHHhcCCCCceEEEE-ecCCccc----------cccC
Q 019519 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIA-N--TPGVAADVGHINTRSEVAGY-MGNDQLG----------QALE 95 (340)
Q Consensus 30 KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~-~--~~~~~~dl~~~~~~~~v~~~-~~~~d~~----------~al~ 95 (340)
||.|+||+|.+|.+++..|+..+. +|++.|.+ . ......++........+... .+-+|.+ +.+.
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGA--KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMG 78 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 589999999999999999998887 89999986 3 22222233322111111111 0111211 1234
Q ss_pred CCCEEEEcCCCCCCC---CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCcEEEEecCC
Q 019519 96 DSDVVIIPAGVPRKP---GMTR---DDLFNINAG----IVKDLCSAIAKYCPNAIVNMISNP 147 (340)
Q Consensus 96 ~aDiVi~~ag~~~~~---g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNP 147 (340)
..|+||+.+|..... ..+. ...+..|+. ..+.+.+.+++.. .+.++++|..
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~ 139 (251)
T PRK07069 79 GLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSV 139 (251)
T ss_pred CccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecCh
Confidence 689999999864321 1122 234456666 6777777777654 3456656543
No 161
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.0064 Score=55.33 Aligned_cols=36 Identities=28% Similarity=0.431 Sum_probs=32.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
+.+++.|+||+|.+|+.++..|+..+. +|++++.++
T Consensus 10 ~~~~vlItGa~g~iG~~~a~~L~~~g~--~V~~~~r~~ 45 (264)
T PRK12829 10 DGLRVLVTGGASGIGRAIAEAFAEAGA--RVHVCDVSE 45 (264)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 457999999999999999999998887 899999865
No 162
>PRK07102 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.0088 Score=53.98 Aligned_cols=117 Identities=19% Similarity=0.098 Sum_probs=68.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCc---ccccc----CCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQ---LGQAL----EDS 97 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al----~~a 97 (340)
|++|.|+||+|.+|..++..|+..+. +|++.|.++. .....++.... ..++.... +-+| +++.+ +..
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 77 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGA--RLYLAARDVERLERLADDLRARG-AVAVSTHELDILDTASHAAFLDSLPALP 77 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCC--EEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEecCCCChHHHHHHHHHHhhcC
Confidence 45899999999999999999998887 8999998762 22233333211 12333221 1122 22222 245
Q ss_pred CEEEEcCCCCCC---CCCCHH---HHHHHHHHHHHHHHHHHHHh---CCCcEEEEecCC
Q 019519 98 DVVIIPAGVPRK---PGMTRD---DLFNINAGIVKDLCSAIAKY---CPNAIVNMISNP 147 (340)
Q Consensus 98 DiVi~~ag~~~~---~g~~r~---~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP 147 (340)
|+||+.+|.... .+.+.. +.+..|......+.+.+..+ ...+.++++|-.
T Consensus 78 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~ 136 (243)
T PRK07102 78 DIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSV 136 (243)
T ss_pred CEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecc
Confidence 999998875321 123332 34566776666666555443 234566666543
No 163
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.08 E-value=0.0062 Score=55.15 Aligned_cols=114 Identities=15% Similarity=0.244 Sum_probs=65.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCc---ccccc-------
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQ---LGQAL------- 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al------- 94 (340)
..+|.|+||+|.+|++++..|+..+. +++++|.+.. .....++.... .++.... +-+| +.+++
T Consensus 4 ~~~vlItG~sg~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (258)
T PRK12429 4 GKVALVTGAASGIGLEIALALAKEGA--KVVIADLNDEAAAAAAEALQKAG--GKAIGVAMDVTDEEAINAGIDYAVETF 79 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999998887 8999998762 22233343211 1222221 1112 11222
Q ss_pred CCCCEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHHhCCCcEEEEecC
Q 019519 95 EDSDVVIIPAGVPRKP---GMT---RDDLFNINAGI----VKDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN 146 (340)
.+.|+||+.+|..... ..+ -...+..|..- ++.+.+.+++.. ...++++|.
T Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss 140 (258)
T PRK12429 80 GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMAS 140 (258)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcc
Confidence 3689999999864321 111 12233445544 566666666543 334555544
No 164
>PLN02688 pyrroline-5-carboxylate reductase
Probab=97.07 E-value=0.0033 Score=58.04 Aligned_cols=66 Identities=20% Similarity=0.264 Sum_probs=45.6
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCC--cceEEEE-eCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPL--VSRLALY-DIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~--~~el~L~-D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
|||++||. |.+|+.++..|...++ ..+|+++ |.+... ...+.... +... .+..+++++||+||++.
T Consensus 1 ~kI~~IG~-G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~--~~~~~~~g----~~~~---~~~~e~~~~aDvVil~v 69 (266)
T PLN02688 1 FRVGFIGA-GKMAEAIARGLVASGVVPPSRISTADDSNPAR--RDVFQSLG----VKTA---ASNTEVVKSSDVIILAV 69 (266)
T ss_pred CeEEEECC-cHHHHHHHHHHHHCCCCCcceEEEEeCCCHHH--HHHHHHcC----CEEe---CChHHHHhcCCEEEEEE
Confidence 68999997 9999999999988775 4578888 765422 22233211 2222 23456788999999986
No 165
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=97.07 E-value=0.0027 Score=59.26 Aligned_cols=64 Identities=23% Similarity=0.249 Sum_probs=44.8
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc-HHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT-PGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
|||+|||. |.+|.+++..|...++ +|.++|.++. ...+.+. . .+... +++. +++++||+||++.
T Consensus 1 m~I~IIG~-G~mG~sla~~L~~~g~--~V~~~d~~~~~~~~a~~~---g---~~~~~--~~~~-~~~~~aDlVilav 65 (279)
T PRK07417 1 MKIGIVGL-GLIGGSLGLDLRSLGH--TVYGVSRRESTCERAIER---G---LVDEA--STDL-SLLKDCDLVILAL 65 (279)
T ss_pred CeEEEEee-cHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHC---C---Ccccc--cCCH-hHhcCCCEEEEcC
Confidence 58999997 9999999999998887 8999998752 1122211 1 11111 1333 5689999999985
No 166
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.07 E-value=0.0034 Score=56.76 Aligned_cols=115 Identities=15% Similarity=0.208 Sum_probs=66.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc---HHHHHHHhcCCCCceEEEEe-cCCc---ccccc------
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PGVAADVGHINTRSEVAGYM-GNDQ---LGQAL------ 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al------ 94 (340)
.++|.|+||+|++|++++..|+..+. +|++++.+.. .....++.... .++.... +-+| ...++
T Consensus 6 ~k~vlItGasggiG~~l~~~l~~~G~--~V~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (248)
T PRK07806 6 GKTALVTGSSRGIGADTAKILAGAGA--HVVVNYRQKAPRANKVVAEIEAAG--GRASAVGADLTDEESVAALMDTAREE 81 (248)
T ss_pred CcEEEEECCCCcHHHHHHHHHHHCCC--EEEEEeCCchHhHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 46899999999999999999998887 8888887541 22222333211 1222211 1122 11222
Q ss_pred -CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecC
Q 019519 95 -EDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISN 146 (340)
Q Consensus 95 -~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN 146 (340)
.+.|+||+.+|............+..|......+++.+.++. ..+.++++|.
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 368999998875322122222334456666666666666553 3456666654
No 167
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.06 E-value=0.0059 Score=57.77 Aligned_cols=68 Identities=22% Similarity=0.229 Sum_probs=47.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc-HHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT-PGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
.+||+|||+ |.+|..++..|...+...+|.++|.++. ...+ ..... ..... .+.++++++||+||++.
T Consensus 6 ~~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a---~~~g~--~~~~~---~~~~~~~~~aDvViiav 74 (307)
T PRK07502 6 FDRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARA---RELGL--GDRVT---TSAAEAVKGADLVILCV 74 (307)
T ss_pred CcEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHH---HhCCC--Cceec---CCHHHHhcCCCEEEECC
Confidence 369999997 9999999999988775558999998752 1111 11111 11111 23457789999999986
No 168
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.04 E-value=0.0011 Score=53.89 Aligned_cols=72 Identities=24% Similarity=0.304 Sum_probs=46.2
Q ss_pred eEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhc--CCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGH--INTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 30 KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~--~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
||+|+||+|.+|+.++..|...+.+.-+.+++.....+....-.+ ......+.... .+ .+.+.++|+||++.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~Dvvf~a~ 74 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--AD-PEELSDVDVVFLAL 74 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TS-GHHHTTESEEEE-S
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cc-hhHhhcCCEEEecC
Confidence 799999999999999999998877766777776652222111111 11112333321 23 36689999999985
No 169
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.04 E-value=0.015 Score=52.44 Aligned_cols=114 Identities=18% Similarity=0.253 Sum_probs=64.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEec-CCc---cccc-------
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYMG-NDQ---LGQA------- 93 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~-~~d---~~~a------- 93 (340)
+.++|.|+||+|.+|+.++..|+..+. +|++++.+.. .....++.+ . .++..+.. -.| +..+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA--RVVVTDRNEEAAERVAAEILA-G--GRAIAVAADVSDEADVEAAVAAALER 78 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhc-C--CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 346999999999999999999998887 8999998762 222233332 1 12222211 111 1122
Q ss_pred cCCCCEEEEcCCCCCCC----CCC---HHHHHHHHHHHH----HHHHHHHHHhCCCcEEEEecC
Q 019519 94 LEDSDVVIIPAGVPRKP----GMT---RDDLFNINAGIV----KDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 94 l~~aDiVi~~ag~~~~~----g~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN 146 (340)
+...|+||+.+|..... ..+ ..+.+..|..-. +.+.+.+.+.. .+.+++++.
T Consensus 79 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS 141 (251)
T PRK07231 79 FGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVAS 141 (251)
T ss_pred hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcC
Confidence 23579999999864211 112 123445565544 44444443333 344555544
No 170
>PRK06182 short chain dehydrogenase; Validated
Probab=97.03 E-value=0.0065 Score=55.97 Aligned_cols=114 Identities=15% Similarity=0.116 Sum_probs=65.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEe-cCCccccccC-------CCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-GNDQLGQALE-------DSD 98 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~~~d~~~al~-------~aD 98 (340)
++++|.|+||+|.+|..++..|...+. +|++.+.++... .++..... .-+.... ...++.+.++ +.|
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~~~l--~~~~~~~~-~~~~~Dv~~~~~~~~~~~~~~~~~~~id 76 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY--TVYGAARRVDKM--EDLASLGV-HPLSLDVTDEASIKAAVDTIIAEEGRID 76 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHhCCC-eEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 456899999999999999999998887 899998765211 12221111 1122111 1112223333 789
Q ss_pred EEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHHhCCCcEEEEecC
Q 019519 99 VVIIPAGVPRKP---GMT---RDDLFNINAGI----VKDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 99 iVi~~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN 146 (340)
++|+.+|..... ..+ ....+..|... ++.+.+.+++... +.+++++.
T Consensus 77 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-g~iv~isS 133 (273)
T PRK06182 77 VLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRS-GRIINISS 133 (273)
T ss_pred EEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCC-CEEEEEcc
Confidence 999999864211 111 23344555543 5666666665543 45666654
No 171
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=97.01 E-value=0.016 Score=52.68 Aligned_cols=118 Identities=14% Similarity=0.194 Sum_probs=67.5
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCCc---cccc-------cC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GNDQ---LGQA-------LE 95 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l~ 95 (340)
.+|.|+||+|.+|++++..|++.+. +|+++|.+. ......++.+.....++.... +-+| ...+ +.
T Consensus 3 k~ilItG~~~~IG~~la~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 3 QVAVVIGGGQTLGAFLCHGLAEEGY--RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999998887 899999865 222222332211101222221 1122 1112 23
Q ss_pred CCCEEEEcCCCCCCC---CCCHH---HHHHHHHHH----HHHHHHHHHHhCCCcEEEEecCCC
Q 019519 96 DSDVVIIPAGVPRKP---GMTRD---DLFNINAGI----VKDLCSAIAKYCPNAIVNMISNPV 148 (340)
Q Consensus 96 ~aDiVi~~ag~~~~~---g~~r~---~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNP~ 148 (340)
..|+||+++|.+... ..+.. ..+..|+.- .+.+.+.+.+..+++.++++|...
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~ 143 (259)
T PRK12384 81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKS 143 (259)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcc
Confidence 579999999865422 22222 223445543 455556555554456777776643
No 172
>PRK09135 pteridine reductase; Provisional
Probab=97.01 E-value=0.014 Score=52.40 Aligned_cols=104 Identities=22% Similarity=0.206 Sum_probs=61.5
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC---cHHHHHHHhcCCCCceEEEEe-cCCc---ccccc-------
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN---TPGVAADVGHINTRSEVAGYM-GNDQ---LGQAL------- 94 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al------- 94 (340)
++|.|+||+|++|++++..|+..+. +++++|... ......++.+... ..+.... +-+| ...++
T Consensus 7 ~~vlItGa~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (249)
T PRK09135 7 KVALITGGARRIGAAIARTLHAAGY--RVAIHYHRSAAEADALAAELNALRP-GSAAALQADLLDPDALPELVAACVAAF 83 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhhcC-CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 5899999999999999999998887 899998753 2222233332211 1121111 1122 11222
Q ss_pred CCCCEEEEcCCCCC--CCC-CC---HHHHHHHHHHHHHHHHHHHHHh
Q 019519 95 EDSDVVIIPAGVPR--KPG-MT---RDDLFNINAGIVKDLCSAIAKY 135 (340)
Q Consensus 95 ~~aDiVi~~ag~~~--~~g-~~---r~~~~~~N~~i~~~i~~~i~~~ 135 (340)
...|+||+++|... ... .+ ..+.+..|+.....+.+.+..+
T Consensus 84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~ 130 (249)
T PRK09135 84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQ 130 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHH
Confidence 25799999998532 111 12 2445667777666666666543
No 173
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.00 E-value=0.015 Score=53.81 Aligned_cols=114 Identities=14% Similarity=0.123 Sum_probs=65.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEe-cCCc---ccccc-------CC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-GNDQ---LGQAL-------ED 96 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------~~ 96 (340)
+++|.|+||+|.+|++++..|+..|. +|++++.+.... .++.... ..++.... +-+| +.+.+ ..
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~--~V~~~~r~~~~~--~~l~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~ 78 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGH--RVVGTVRSEAAR--ADFEALH-PDRALARLLDVTDFDAIDAVVADAEATFGP 78 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcC--EEEEEeCCHHHH--HHHHhhc-CCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 35799999999999999999998887 899999865211 1222111 11122111 1112 11222 25
Q ss_pred CCEEEEcCCCCCC---CCCCH---HHHHHHHHHHHHHHHHHHHHh---CCCcEEEEecC
Q 019519 97 SDVVIIPAGVPRK---PGMTR---DDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (340)
Q Consensus 97 aDiVi~~ag~~~~---~g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 146 (340)
.|+||+++|.... ...+. ...+..|+.-...+.+.+..+ ...+.+|++|.
T Consensus 79 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS 137 (277)
T PRK06180 79 IDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITS 137 (277)
T ss_pred CCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEec
Confidence 8999999986421 12222 233567776666666654332 22345666664
No 174
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.00 E-value=0.0061 Score=54.41 Aligned_cols=116 Identities=16% Similarity=0.128 Sum_probs=64.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCccccc-------cCCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQLGQA-------LEDS 97 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~~~a-------l~~a 97 (340)
.++|.|+||+|.+|+.++..|++.+. +++++|.+.. .....++..... ..+.... ...++.++ +...
T Consensus 7 ~k~vlItGatg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 7 GKVVAITGGFGGLGRATAAWLAARGA--RVALIGRGAAPLSQTLPGVPADAL-RIGGIDLVDPQAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCEEEEECCCCcHhHHHHHHHHHCCC--eEEEEeCChHhHHHHHHHHhhcCc-eEEEeecCCHHHHHHHHHHHHHHhCCc
Confidence 45899999999999999999998887 8999998752 122223332211 1111110 11112222 2368
Q ss_pred CEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCcEEEEecC
Q 019519 98 DVVIIPAGVPRKP---GMTR---DDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (340)
Q Consensus 98 DiVi~~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 146 (340)
|+||+.+|..... ..+. .+.+..|......+++.+.++ .+...+++++.
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS 141 (239)
T PRK12828 84 DALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGA 141 (239)
T ss_pred CEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECc
Confidence 9999998753211 1122 233445655555555544322 23456665554
No 175
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.99 E-value=0.0024 Score=52.61 Aligned_cols=102 Identities=23% Similarity=0.302 Sum_probs=56.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~ 106 (340)
..+||+|||+ |.||.+++..|...++ +|.-+-... ..-+.++.+... .... .++.+.+++||+++++.
T Consensus 9 ~~l~I~iIGa-GrVG~~La~aL~~ag~--~v~~v~srs-~~sa~~a~~~~~--~~~~----~~~~~~~~~aDlv~iav-- 76 (127)
T PF10727_consen 9 ARLKIGIIGA-GRVGTALARALARAGH--EVVGVYSRS-PASAERAAAFIG--AGAI----LDLEEILRDADLVFIAV-- 76 (127)
T ss_dssp ---EEEEECT-SCCCCHHHHHHHHTTS--EEEEESSCH-H-HHHHHHC--T--T---------TTGGGCC-SEEEE-S--
T ss_pred CccEEEEECC-CHHHHHHHHHHHHCCC--eEEEEEeCC-cccccccccccc--cccc----cccccccccCCEEEEEe--
Confidence 4589999998 9999999999999887 665554322 222233333221 1221 23467789999999985
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHh--C-CCcEEEEe--cCCCCccHHH
Q 019519 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKY--C-PNAIVNMI--SNPVNSTVPI 154 (340)
Q Consensus 107 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~--~-p~a~viv~--tNP~d~~t~~ 154 (340)
| . ..+.++++++..+ . |+.+|+=. +-+++++..+
T Consensus 77 p------------D--daI~~va~~La~~~~~~~g~iVvHtSGa~~~~vL~p~ 115 (127)
T PF10727_consen 77 P------------D--DAIAEVAEQLAQYGAWRPGQIVVHTSGALGSDVLAPA 115 (127)
T ss_dssp -------------C--CHHHHHHHHHHCC--S-TT-EEEES-SS--GGGGHHH
T ss_pred c------------h--HHHHHHHHHHHHhccCCCCcEEEECCCCChHHhhhhH
Confidence 2 1 2456777777766 2 44333322 3446677664
No 176
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.99 E-value=0.0036 Score=58.76 Aligned_cols=74 Identities=24% Similarity=0.422 Sum_probs=51.5
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEc--C
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIP--A 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~--a 104 (340)
.||+|+|+ |.+|.++++.|...+ +.+|.++|++. ++..+.++.+......+.. ..++++.++++|+||.+ +
T Consensus 128 k~vlIlGa-GGaaraia~aL~~~G-~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~---~~~~~~~~~~aDiVInaTp~ 202 (284)
T PRK12549 128 ERVVQLGA-GGAGAAVAHALLTLG-VERLTIFDVDPARAAALADELNARFPAARATA---GSDLAAALAAADGLVHATPT 202 (284)
T ss_pred CEEEEECC-cHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhCCCeEEEe---ccchHhhhCCCCEEEECCcC
Confidence 59999998 999999999998877 36899999986 3444555544321112222 13344578899999997 5
Q ss_pred CCC
Q 019519 105 GVP 107 (340)
Q Consensus 105 g~~ 107 (340)
|++
T Consensus 203 Gm~ 205 (284)
T PRK12549 203 GMA 205 (284)
T ss_pred CCC
Confidence 654
No 177
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.014 Score=53.71 Aligned_cols=113 Identities=14% Similarity=0.032 Sum_probs=64.7
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEe-cCCcc---ccc-------cCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-GNDQL---GQA-------LEDS 97 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~~~d~---~~a-------l~~a 97 (340)
++|.|+||+|++|+.++..|+..+. .+.+++.+... ..++.... ..++.... +-+|. .++ +...
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~--~v~~~~r~~~~--~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD--RVAATVRRPDA--LDDLKARY-GDRLWVLQLDVTDSAAVRAVVDRAFAALGRI 77 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHHhc-cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999998887 78888876411 11221111 11222221 11222 111 2457
Q ss_pred CEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEecC
Q 019519 98 DVVIIPAGVPRKPG---MT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (340)
Q Consensus 98 DiVi~~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 146 (340)
|+||+++|...... .+ -...+..|......+.+.+..+ ...+.++++|.
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS 135 (276)
T PRK06482 78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSS 135 (276)
T ss_pred CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcC
Confidence 99999998753221 12 2334556777777777665322 22345555553
No 178
>PRK06545 prephenate dehydrogenase; Validated
Probab=96.98 E-value=0.0043 Score=60.15 Aligned_cols=68 Identities=21% Similarity=0.292 Sum_probs=45.9
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
.||+|||. |.+|.+++..|...++ ++.++|.+........-..... +.. ..+++.+++++||+||++.
T Consensus 1 ~~I~iIG~-GliG~siA~~L~~~G~--~v~i~~~~~~~~~~~~a~~~~~---~~~--~~~~~~~~~~~aDlVilav 68 (359)
T PRK06545 1 RTVLIVGL-GLIGGSLALAIKAAGP--DVFIIGYDPSAAQLARALGFGV---IDE--LAADLQRAAAEADLIVLAV 68 (359)
T ss_pred CeEEEEEe-CHHHHHHHHHHHhcCC--CeEEEEeCCCHHHHHHHhcCCC---Ccc--cccCHHHHhcCCCEEEEeC
Confidence 37999998 9999999999998887 7888888763221111111111 111 1245567889999999985
No 179
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.97 E-value=0.0045 Score=61.59 Aligned_cols=64 Identities=25% Similarity=0.398 Sum_probs=46.2
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcH--HHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~--~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
|||+||||+|.+|..++..|...++ +|.++|.++.. ..+.++ .+.. .++..+++.+||+||++.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~--~V~v~~r~~~~~~~~a~~~-------gv~~---~~~~~e~~~~aDvVIlav 66 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGF--EVIVTGRDPKKGKEVAKEL-------GVEY---ANDNIDAAKDADIVIISV 66 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCC--EEEEEECChHHHHHHHHHc-------CCee---ccCHHHHhccCCEEEEec
Confidence 6899998559999999999998887 89999987522 122211 1222 135567789999999985
No 180
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=96.97 E-value=0.011 Score=53.73 Aligned_cols=115 Identities=21% Similarity=0.250 Sum_probs=66.1
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEE-ecCCccccc-------cCCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGY-MGNDQLGQA-------LEDSD 98 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~-~~~~d~~~a-------l~~aD 98 (340)
.++.|+||+|.+|..++..|+..+. +++++|.+.. .....++.... ..+... +...+.+++ +...|
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEGA--RVVIADIKPARARLAALEIGPAA--IAVSLDVTRQDSIDRIVAAAVERFGGID 82 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHHHhCCce--EEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 5799999999999999999999887 8999998762 22222232110 011111 011122222 24689
Q ss_pred EEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHHh----CCCcEEEEecCC
Q 019519 99 VVIIPAGVPRK-P--GMT---RDDLFNINAGIVKDLCSAIAKY----CPNAIVNMISNP 147 (340)
Q Consensus 99 iVi~~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~tNP 147 (340)
++|+.+|.... + ..+ -...+..|..-...+.+.+..+ .+.+.+++++..
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~ 141 (257)
T PRK07067 83 ILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQ 141 (257)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCH
Confidence 99999886421 1 112 2334566666665565555432 234667666653
No 181
>PRK08643 acetoin reductase; Validated
Probab=96.97 E-value=0.061 Score=48.79 Aligned_cols=116 Identities=23% Similarity=0.290 Sum_probs=65.9
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCcc---ccc-------cC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQL---GQA-------LE 95 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~---~~a-------l~ 95 (340)
.++.|+||+|.+|.+++..|+..+. +++++|.+.. .....++.+.. .++.... +-+|. .+. +.
T Consensus 3 k~~lItGas~giG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 3 KVALVTGAGQGIGFAIAKRLVEDGF--KVAIVDYNEETAQAAADKLSKDG--GKAIAVKADVSDRDQVFAAVRQVVDTFG 78 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999998887 8999998752 22233343321 1222211 11121 111 23
Q ss_pred CCCEEEEcCCCCCC-C--CCCH---HHHHHHHHHHH----HHHHHHHHHhCCCcEEEEecCCC
Q 019519 96 DSDVVIIPAGVPRK-P--GMTR---DDLFNINAGIV----KDLCSAIAKYCPNAIVNMISNPV 148 (340)
Q Consensus 96 ~aDiVi~~ag~~~~-~--g~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tNP~ 148 (340)
+.|+||+++|.... + ..+. ...+..|+.-. +.+.+.+.+..+++.++++|...
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~ 141 (256)
T PRK08643 79 DLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQA 141 (256)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccc
Confidence 68999999986421 1 1111 22344555443 34444444434456777776543
No 182
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.95 E-value=0.0039 Score=56.92 Aligned_cols=112 Identities=19% Similarity=0.156 Sum_probs=62.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCce-EEEEe-c-CCcccccc-CCCCEEE
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSE-VAGYM-G-NDQLGQAL-EDSDVVI 101 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~-v~~~~-~-~~d~~~al-~~aDiVi 101 (340)
.+++||.|+||+|++|+.++..|+..++ +|+.+..+...... .+.... ... +.... . ..++.+++ .++|+||
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~-~~~~~~-~~~~~~~Dl~d~~~~l~~~~~~~~d~vi 90 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGF--AVKAGVRDVDKAKT-SLPQDP-SLQIVRADVTEGSDKLVEAIGDDSDAVI 90 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCC--EEEEEecCHHHHHH-hcccCC-ceEEEEeeCCCCHHHHHHHhhcCCCEEE
Confidence 3468999999999999999999998887 78777654321111 111110 011 11111 1 01233556 6899999
Q ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEe
Q 019519 102 IPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 144 (340)
Q Consensus 102 ~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~ 144 (340)
+++|.....+. ...+..|......+++.+.+.... .++.+
T Consensus 91 ~~~g~~~~~~~--~~~~~~n~~~~~~ll~a~~~~~~~-~iV~i 130 (251)
T PLN00141 91 CATGFRRSFDP--FAPWKVDNFGTVNLVEACRKAGVT-RFILV 130 (251)
T ss_pred ECCCCCcCCCC--CCceeeehHHHHHHHHHHHHcCCC-EEEEE
Confidence 98875432111 111233444556667777665443 44443
No 183
>PRK08278 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.031 Score=51.65 Aligned_cols=159 Identities=13% Similarity=0.107 Sum_probs=85.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc---------HHHHHHHhcCCCCceEEEEe-cCCc---ccccc
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---------PGVAADVGHINTRSEVAGYM-GNDQ---LGQAL 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~---------~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al 94 (340)
.+++.|+||+|.+|++++..|+..+. +|+++|.+.. +..+.++.... .++.... +-+| .++.+
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~ 81 (273)
T PRK08278 6 GKTLFITGASRGIGLAIALRAARDGA--NIVIAAKTAEPHPKLPGTIHTAAEEIEAAG--GQALPLVGDVRDEDQVAAAV 81 (273)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEecccccccchhhHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHH
Confidence 35899999999999999999998887 8999997641 11222332211 1222111 1112 22222
Q ss_pred -------CCCCEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHHHh---CCCcEEEEecCCCCccHHHHHHH
Q 019519 95 -------EDSDVVIIPAGVPRKP---GMTRD---DLFNINAGIVKDLCSAIAKY---CPNAIVNMISNPVNSTVPIAAEV 158 (340)
Q Consensus 95 -------~~aDiVi~~ag~~~~~---g~~r~---~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP~d~~t~~~~~~ 158 (340)
...|+||+.+|..... ..+.. ..+..|+.-...+.+.+..+ ...+.++++|.+.....
T Consensus 82 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~------ 155 (273)
T PRK08278 82 AKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDP------ 155 (273)
T ss_pred HHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccc------
Confidence 2679999999863211 22322 23445655555555544332 23467776665432110
Q ss_pred HHHhCCCCCCceEeccchhHHHHHHHHHHHcCCCCCCCceeEEE
Q 019519 159 FKKAGTYNEKKLFGVTTLDVVRAKTFYAGKANVNVAEVNVPVVG 202 (340)
Q Consensus 159 ~~~sg~~~~~kviG~~~ld~~R~~~~la~~l~v~~~~v~~~v~G 202 (340)
. +++....++.+.....++-..+++.++ +..|++..+.
T Consensus 156 ---~-~~~~~~~Y~~sK~a~~~~~~~la~el~--~~~I~v~~i~ 193 (273)
T PRK08278 156 ---K-WFAPHTAYTMAKYGMSLCTLGLAEEFR--DDGIAVNALW 193 (273)
T ss_pred ---c-ccCCcchhHHHHHHHHHHHHHHHHHhh--hcCcEEEEEe
Confidence 0 023344566653333456666777765 3556655543
No 184
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.94 E-value=0.01 Score=53.53 Aligned_cols=116 Identities=20% Similarity=0.251 Sum_probs=65.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCc---ccccc------
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQ---LGQAL------ 94 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al------ 94 (340)
+.++|.|+||+|++|+.++..|+..+. +|+++|.+.. .....++.... .++.... +-.| .++++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~ 77 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA--KVAVFDLNREAAEKVAADIRAKG--GNAQAFACDITDRDSVDTAVAAAEQA 77 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 346999999999999999999998887 8999998752 22223333221 1222221 1112 11222
Q ss_pred -CCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCcEEEEecC
Q 019519 95 -EDSDVVIIPAGVPRKP---GMTR---DDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (340)
Q Consensus 95 -~~aDiVi~~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 146 (340)
...|+||+.+|..... ..+. ...+..|+.....+.+.+..+ .+.+.+++++.
T Consensus 78 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss 139 (250)
T TIGR03206 78 LGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIAS 139 (250)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECc
Confidence 3589999998853211 1222 233556666665555544321 23345555554
No 185
>PLN02996 fatty acyl-CoA reductase
Probab=96.94 E-value=0.014 Score=58.99 Aligned_cols=107 Identities=18% Similarity=0.133 Sum_probs=67.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhC-CCcceEEEEeCCC----cH-HHHHHHhcCC----------------CCceEEEEe
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN----TP-GVAADVGHIN----------------TRSEVAGYM 85 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~-~~~~el~L~D~~~----~~-~~~~dl~~~~----------------~~~~v~~~~ 85 (340)
.+.|.|+||+||+|++++..|+.. +-+.+|.++.... .. ....++.... ...++....
T Consensus 11 ~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~ 90 (491)
T PLN02996 11 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVP 90 (491)
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEe
Confidence 458999999999999999987764 4456777777643 11 1111111100 012444433
Q ss_pred cCC----------c-cccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 019519 86 GND----------Q-LGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKY 135 (340)
Q Consensus 86 ~~~----------d-~~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~ 135 (340)
+.- + +++.++++|+||++|+... ...........|+....++.+.+.+.
T Consensus 91 GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~~a~~~ 150 (491)
T PLN02996 91 GDISYDDLGVKDSNLREEMWKEIDIVVNLAATTN-FDERYDVALGINTLGALNVLNFAKKC 150 (491)
T ss_pred cccCCcCCCCChHHHHHHHHhCCCEEEECccccC-CcCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 210 1 2345679999999997543 23345667788999999999988764
No 186
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.94 E-value=0.019 Score=52.46 Aligned_cols=114 Identities=17% Similarity=0.104 Sum_probs=64.6
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCCc---ccc-------ccC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GNDQ---LGQ-------ALE 95 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~d---~~~-------al~ 95 (340)
|++.|+||+|.+|..++..|+..|. +|++.|.++ ......++.+.. .+.... +-+| .++ .+.
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~Dv~d~~~~~~~~~~~~~~~g 75 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGA--RVVISSRNEENLEKALKELKEYG---EVYAVKADLSDKDDLKNLVKEAWELLG 75 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC---CceEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 5899999999999999999999887 899999875 222233443221 122111 1112 111 134
Q ss_pred CCCEEEEcCCCCCC-----CCCCHHHH---HHHHH----HHHHHHHHHHHHhCCCcEEEEecCC
Q 019519 96 DSDVVIIPAGVPRK-----PGMTRDDL---FNINA----GIVKDLCSAIAKYCPNAIVNMISNP 147 (340)
Q Consensus 96 ~aDiVi~~ag~~~~-----~g~~r~~~---~~~N~----~i~~~i~~~i~~~~p~a~viv~tNP 147 (340)
..|++|+.+|.... ...+..++ +..|. -+.+.+.+.+.+....+.||++|.-
T Consensus 76 ~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~ 139 (259)
T PRK08340 76 GIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSV 139 (259)
T ss_pred CCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCc
Confidence 68999999986421 11222222 22232 2344455555433345677776644
No 187
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=96.93 E-value=0.0069 Score=60.77 Aligned_cols=98 Identities=16% Similarity=0.239 Sum_probs=61.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCC--CceEEEEecCCccccccC---CCCEEEE
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINT--RSEVAGYMGNDQLGQALE---DSDVVII 102 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~--~~~v~~~~~~~d~~~al~---~aDiVi~ 102 (340)
|.+|+|||. |.+|+++|..|+..++ +|.+||+++.. +.++..... ...+..+ .+++++++ ++|+|++
T Consensus 1 ~~~IgvIGL-G~MG~~lA~nL~~~G~--~V~v~dr~~~~--~~~l~~~~~~~g~~i~~~---~s~~e~v~~l~~~d~Iil 72 (470)
T PTZ00142 1 MSDIGLIGL-AVMGQNLALNIASRGF--KISVYNRTYEK--TEEFVKKAKEGNTRVKGY---HTLEELVNSLKKPRKVIL 72 (470)
T ss_pred CCEEEEEeE-hHHHHHHHHHHHHCCC--eEEEEeCCHHH--HHHHHHhhhhcCCcceec---CCHHHHHhcCCCCCEEEE
Confidence 358999998 9999999999999998 99999987522 112221100 1123332 45556554 5898888
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecCCC
Q 019519 103 PAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKY-CPNAIVNMISNPV 148 (340)
Q Consensus 103 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP~ 148 (340)
..- +.+.++++.+.+..+ .|+.++|..+|-.
T Consensus 73 ~v~---------------~~~~v~~vi~~l~~~L~~g~iIID~gn~~ 104 (470)
T PTZ00142 73 LIK---------------AGEAVDETIDNLLPLLEKGDIIIDGGNEW 104 (470)
T ss_pred EeC---------------ChHHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 741 223444444444443 4677888888754
No 188
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.022 Score=51.23 Aligned_cols=117 Identities=16% Similarity=0.154 Sum_probs=67.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCcc---ccc------
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQL---GQA------ 93 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~---~~a------ 93 (340)
++.++|.|+||+|.+|+.++..|...+. ++++++.++. .....++.... .++..+. +-+|. ++.
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~ 80 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGA--TVAFNDGLAAEARELAAALEAAG--GRAHAIAADLADPASVQRFFDAAAA 80 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHH
Confidence 3457999999999999999999998887 8999987652 22333443222 1232221 11221 111
Q ss_pred -cCCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCcEEEEecC
Q 019519 94 -LEDSDVVIIPAGVPRKP---GMTR---DDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (340)
Q Consensus 94 -l~~aDiVi~~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 146 (340)
+.+.|+||+.+|..... ..+. ...+..|..-...+.+.+.++ .+.+.++++|.
T Consensus 81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS 143 (250)
T PRK12939 81 ALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLAS 143 (250)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECc
Confidence 24789999999864321 1222 223455666555555554432 23456666654
No 189
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=96.92 E-value=0.0088 Score=56.88 Aligned_cols=114 Identities=12% Similarity=0.080 Sum_probs=70.0
Q ss_pred eEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHH-----HHHHhcCC-----CC-ceEEEEecC----------C
Q 019519 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGV-----AADVGHIN-----TR-SEVAGYMGN----------D 88 (340)
Q Consensus 30 KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~-----~~dl~~~~-----~~-~~v~~~~~~----------~ 88 (340)
+|.|+||+|++|++++..|+..+...+|+++........ ...+.... .. .++....+. .
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 588999999999999999998875447888887642111 11111100 00 234443211 1
Q ss_pred ccccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 89 QLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 89 d~~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
++.+..+++|+||++|+... ......++...|+.....+.+.+.+..... ++.+|
T Consensus 81 ~~~~~~~~~d~vih~a~~~~-~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~-~v~iS 135 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVN-WVYPYSELRAANVLGTREVLRLAASGRAKP-LHYVS 135 (367)
T ss_pred HHHHHHhhCCEEEeCCcEec-cCCcHHHHhhhhhHHHHHHHHHHhhCCCce-EEEEc
Confidence 22344578999999987542 123344566788888888888887765443 34333
No 190
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=96.91 E-value=0.018 Score=53.29 Aligned_cols=119 Identities=18% Similarity=0.157 Sum_probs=75.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-c---CCcccc-------c
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-G---NDQLGQ-------A 93 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~---~~d~~~-------a 93 (340)
++..+.|+||++-+|..+|..|+.+++ +|+|+..++ +...+.++++... ..+.... + .++.+. .
T Consensus 5 ~~~~~lITGASsGIG~~~A~~lA~~g~--~liLvaR~~~kL~~la~~l~~~~~-v~v~vi~~DLs~~~~~~~l~~~l~~~ 81 (265)
T COG0300 5 KGKTALITGASSGIGAELAKQLARRGY--NLILVARREDKLEALAKELEDKTG-VEVEVIPADLSDPEALERLEDELKER 81 (265)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCcHHHHHHHHHHHHHhhC-ceEEEEECcCCChhHHHHHHHHHHhc
Confidence 456999999999999999999999998 999999887 4666677775431 1222211 1 111111 1
Q ss_pred cCCCCEEEEcCCCCCCC------CCCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEecCCC
Q 019519 94 LEDSDVVIIPAGVPRKP------GMTRDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISNPV 148 (340)
Q Consensus 94 l~~aDiVi~~ag~~~~~------g~~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP~ 148 (340)
.-..|+.|..||...-. -.+-.+++.-|+.-..++...+-.. +-.+-||+++.-.
T Consensus 82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~a 145 (265)
T COG0300 82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAA 145 (265)
T ss_pred CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechh
Confidence 12689999999875321 1223466777776555555444432 2356777776544
No 191
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.91 E-value=0.021 Score=51.50 Aligned_cols=116 Identities=19% Similarity=0.226 Sum_probs=66.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEe-cCCcc---c-------cccC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-GNDQL---G-------QALE 95 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~~~d~---~-------~al~ 95 (340)
+.++|.|+||+|.+|.+++..|+..|. +|++++.++.......+.... .++.... +-+|. . +.+.
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~--~vi~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA--DIVGAGRSEPSETQQQVEALG--RRFLSLTADLSDIEAIKALVDSAVEEFG 79 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCchHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 356999999999999999999999887 899999765322222232221 1222211 11121 1 1224
Q ss_pred CCCEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHH----HhCCCcEEEEecC
Q 019519 96 DSDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAIA----KYCPNAIVNMISN 146 (340)
Q Consensus 96 ~aDiVi~~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~----~~~p~a~viv~tN 146 (340)
..|++|+.+|..... ..+ -.+.+..|......+.+.+. +....+.+++++.
T Consensus 80 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS 140 (248)
T TIGR01832 80 HIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIAS 140 (248)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 689999999864221 111 22345566555444444443 3333466666654
No 192
>PRK06914 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.014 Score=53.91 Aligned_cols=116 Identities=14% Similarity=0.115 Sum_probs=64.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCccc---------cccC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQLG---------QALE 95 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~~---------~al~ 95 (340)
...+.|+||+|.+|++++..|+..+. +|++++.+.. .....++.+.....++.... +-+|.+ +.+.
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 80 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY--LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIG 80 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcC
Confidence 34789999999999999999998887 8999987652 22222222211112233222 112321 1123
Q ss_pred CCCEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHH----HHHhCCCcEEEEecC
Q 019519 96 DSDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSA----IAKYCPNAIVNMISN 146 (340)
Q Consensus 96 ~aDiVi~~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN 146 (340)
..|+||+++|..... +.+ -.+.+..|......+.+. +++... +.++++|.
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~vsS 140 (280)
T PRK06914 81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKS-GKIINISS 140 (280)
T ss_pred CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CEEEEECc
Confidence 579999999864321 112 123345666555444444 444433 44554543
No 193
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.89 E-value=0.0091 Score=54.17 Aligned_cols=111 Identities=13% Similarity=0.188 Sum_probs=63.1
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcH--HHHHHHhcCCCCceEEEEe-cCCc---ccc-------ccC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGYM-GNDQ---LGQ-------ALE 95 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~--~~~~dl~~~~~~~~v~~~~-~~~d---~~~-------al~ 95 (340)
|+|.|+||+|.+|..++..|...|. +|+++|.++.. ....++. .++.... +-+| .++ .+.
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dl~~~~~i~~~~~~~~~~~~ 73 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGH--KVIATGRRQERLQELKDELG-----DNLYIAQLDVRNRAAIEEMLASLPAEWR 73 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhc-----cceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5899999999999999999998887 89999987521 1111111 1122111 1111 112 224
Q ss_pred CCCEEEEcCCCCC--CC--CCCH---HHHHHHHHHHH----HHHHHHHHHhCCCcEEEEecCC
Q 019519 96 DSDVVIIPAGVPR--KP--GMTR---DDLFNINAGIV----KDLCSAIAKYCPNAIVNMISNP 147 (340)
Q Consensus 96 ~aDiVi~~ag~~~--~~--g~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tNP 147 (340)
+.|+||+.+|... .+ ..+. ...+..|.... +.+.+.+.+. ..+.++++|..
T Consensus 74 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~ 135 (248)
T PRK10538 74 NIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-NHGHIINIGST 135 (248)
T ss_pred CCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECCc
Confidence 7999999998642 11 2222 23455565554 4444444332 23566666653
No 194
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.89 E-value=0.0061 Score=54.60 Aligned_cols=115 Identities=20% Similarity=0.309 Sum_probs=64.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCc---cccc-------
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQ---LGQA------- 93 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d---~~~a------- 93 (340)
++++|.|+||+|.+|..++..|+..++ +|.+++.++. .....++.... .++.... +-.| +.++
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA--KVVIYDSNEEAAEALAAELRAAG--GEARVLVFDVSDEAAVRALIEAAVEA 79 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHH
Confidence 346899999999999999999998887 7999998752 22222333211 1222211 1111 1122
Q ss_pred cCCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCcEEEEec
Q 019519 94 LEDSDVVIIPAGVPRKP---GMTR---DDLFNINAGIVKDLCSAIAKY---CPNAIVNMIS 145 (340)
Q Consensus 94 l~~aDiVi~~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~t 145 (340)
+...|.||+.+|.-... ..+. ...+..|......+.+.+..+ .....++++|
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~s 140 (246)
T PRK05653 80 FGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNIS 140 (246)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence 23469999998752211 1122 234556666666555555322 2224555555
No 195
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.023 Score=51.54 Aligned_cols=115 Identities=15% Similarity=0.109 Sum_probs=64.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCCc---cccccC------
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GNDQ---LGQALE------ 95 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al~------ 95 (340)
..+|.|+||+|.+|+.++..|+..+. +|++++.++ ......++.... .++.... +-+| ..+.++
T Consensus 7 ~k~ilItGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 7 GKVALVTGGAAGIGRATALAFAREGA--KVVVADRDAAGGEETVALIREAG--GEALFVACDVTRDAEVKALVEQTIAAY 82 (253)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 46999999999999999999998886 899999875 222233333222 1222221 1111 222232
Q ss_pred -CCCEEEEcCCCCCCC----CCCHH---HHHHHHHHHHHHHH----HHHHHhCCCcEEEEecCC
Q 019519 96 -DSDVVIIPAGVPRKP----GMTRD---DLFNINAGIVKDLC----SAIAKYCPNAIVNMISNP 147 (340)
Q Consensus 96 -~aDiVi~~ag~~~~~----g~~r~---~~~~~N~~i~~~i~----~~i~~~~p~a~viv~tNP 147 (340)
..|+||+.+|..... ..+.. ..+..|+.-...+. +.+.+. ..+.++++|..
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~sS~ 145 (253)
T PRK06172 83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ-GGGAIVNTASV 145 (253)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECch
Confidence 459999999864221 22222 33455655444333 334322 23556666543
No 196
>PRK06924 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.0083 Score=54.28 Aligned_cols=34 Identities=18% Similarity=0.267 Sum_probs=30.5
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
++|.|+||+|.+|+.++..|+..+. +|++++.++
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~--~V~~~~r~~ 35 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGT--HVISISRTE 35 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCC--EEEEEeCCc
Confidence 4799999999999999999999887 899998765
No 197
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.013 Score=53.61 Aligned_cols=103 Identities=15% Similarity=0.203 Sum_probs=60.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEe-cCCccccccCCCCEEEEcC
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-GNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~~~d~~~al~~aDiVi~~a 104 (340)
++.+++.|+||+|.+|.+++..|+..|. +++++|.+........ .+.. ...+.... ...+..+.+...|++|+.|
T Consensus 12 l~~k~~lITGas~gIG~ala~~l~~~G~--~Vi~~~r~~~~~~~~~-~~~~-~~~~~~D~~~~~~~~~~~~~iDilVnnA 87 (245)
T PRK12367 12 WQGKRIGITGASGALGKALTKAFRAKGA--KVIGLTHSKINNSESN-DESP-NEWIKWECGKEESLDKQLASLDVLILNH 87 (245)
T ss_pred hCCCEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEECCchhhhhhh-ccCC-CeEEEeeCCCHHHHHHhcCCCCEEEECC
Confidence 4457899999999999999999998887 8999987652111111 1111 11122111 1123335567899999999
Q ss_pred CCCCCCCCCH---HHHHHHHHHHHHHHHHHH
Q 019519 105 GVPRKPGMTR---DDLFNINAGIVKDLCSAI 132 (340)
Q Consensus 105 g~~~~~g~~r---~~~~~~N~~i~~~i~~~i 132 (340)
|.......+. .+.+..|......+++.+
T Consensus 88 G~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 118 (245)
T PRK12367 88 GINPGGRQDPENINKALEINALSSWRLLELF 118 (245)
T ss_pred ccCCcCCCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 8643222222 334556665444444443
No 198
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.88 E-value=0.018 Score=52.51 Aligned_cols=116 Identities=16% Similarity=0.163 Sum_probs=69.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCccc---cc-------c
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQLG---QA-------L 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~~---~a-------l 94 (340)
.++|.|+||+|.+|++++..|+..+. +|+++|.+.. .....++.... .++.... +-+|.+ +. +
T Consensus 12 ~k~ilItGa~g~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~i~~~~--~~~~~~~~Dl~d~~~i~~~~~~~~~~~ 87 (259)
T PRK08213 12 GKTALVTGGSRGLGLQIAEALGEAGA--RVVLSARKAEELEEAAAHLEALG--IDALWIAADVADEADIERLAEETLERF 87 (259)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999998887 8999987642 22222232211 1222221 112221 11 2
Q ss_pred CCCCEEEEcCCCCCCC---CC---CHHHHHHHHHHHHHHHHHHHHHh----CCCcEEEEecCC
Q 019519 95 EDSDVVIIPAGVPRKP---GM---TRDDLFNINAGIVKDLCSAIAKY----CPNAIVNMISNP 147 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~---g~---~r~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~tNP 147 (340)
...|+||+++|..... .. .-...+..|+.....+.+.+.++ .+.+.++++|..
T Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~ 150 (259)
T PRK08213 88 GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASV 150 (259)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECCh
Confidence 3679999998863211 11 12345567887777777766554 234566666653
No 199
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.01 Score=52.57 Aligned_cols=75 Identities=20% Similarity=0.229 Sum_probs=45.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCce-EEEEe-cCCccccccC---CCCEEEE
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSE-VAGYM-GNDQLGQALE---DSDVVII 102 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~-v~~~~-~~~d~~~al~---~aDiVi~ 102 (340)
+++|.|+||+|++|+.++..|+.. . +|+++|.+... ..++.+...... +.... ...++.++++ +.|+||+
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~--~V~~~~r~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~ 77 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-H--TLLLGGRPAER--LDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVH 77 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-C--CEEEEeCCHHH--HHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEE
Confidence 468999999999999999998877 5 89999976422 112221110001 11110 0112333343 6999999
Q ss_pred cCCCC
Q 019519 103 PAGVP 107 (340)
Q Consensus 103 ~ag~~ 107 (340)
++|..
T Consensus 78 ~ag~~ 82 (227)
T PRK08219 78 NAGVA 82 (227)
T ss_pred CCCcC
Confidence 99864
No 200
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=96.87 E-value=0.0084 Score=55.36 Aligned_cols=98 Identities=19% Similarity=0.254 Sum_probs=63.3
Q ss_pred EEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccC-CCCEEEEcCCCCCC
Q 019519 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALE-DSDVVIIPAGVPRK 109 (340)
Q Consensus 31 I~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~-~aDiVi~~ag~~~~ 109 (340)
|+|+|++|+||+++...|...++ +|.++-.+...... ..+ ..+... +.+.+... ++|+||.+||.|--
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh--~v~iltR~~~~~~~--~~~----~~v~~~---~~~~~~~~~~~DavINLAG~~I~ 69 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGH--QVTILTRRPPKASQ--NLH----PNVTLW---EGLADALTLGIDAVINLAGEPIA 69 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCC--eEEEEEcCCcchhh--hcC----cccccc---chhhhcccCCCCEEEECCCCccc
Confidence 67999999999999999999888 88888776522111 111 112211 11223333 79999999998743
Q ss_pred CC----CCHHHHHHHHHHHHHHHHHHHHHhCCCc
Q 019519 110 PG----MTRDDLFNINAGIVKDLCSAIAKYCPNA 139 (340)
Q Consensus 110 ~g----~~r~~~~~~N~~i~~~i~~~i~~~~p~a 139 (340)
.. +-...+.+--+...+.+.+.|.+.....
T Consensus 70 ~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P 103 (297)
T COG1090 70 ERRWTEKQKEEIRQSRINTTEKLVELIAASETKP 103 (297)
T ss_pred cccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCC
Confidence 22 1233445556777888888888765443
No 201
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=96.86 E-value=0.011 Score=53.19 Aligned_cols=114 Identities=21% Similarity=0.247 Sum_probs=65.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEec-CCc---ccccc-------
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYMG-NDQ---LGQAL------- 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~-~~d---~~~al------- 94 (340)
.++|.|+||+|.+|..++..|+..+. +|++++.+.. .....++.... .++..... -.| +.+.+
T Consensus 6 ~~~ilItGasg~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 6 GRVALVTGAARGIGRAIAVRLAADGA--EVIVVDICGDDAAATAELVEAAG--GKARARQVDVRDRAALKAAVAAGVEDF 81 (251)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999998887 8999998752 22222333221 12332221 111 12222
Q ss_pred CCCCEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHH----HHhCCCcEEEEecC
Q 019519 95 EDSDVVIIPAGVPRK-P--GMTR---DDLFNINAGIVKDLCSAI----AKYCPNAIVNMISN 146 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~-~--g~~r---~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tN 146 (340)
...|+||+++|.... + ..+. ...+..|+.-...+.+.+ .+.. ...++++|.
T Consensus 82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss 142 (251)
T PRK12826 82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSS 142 (251)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEec
Confidence 368999999876432 1 2222 234556666555555544 3333 345555543
No 202
>PLN02256 arogenate dehydrogenase
Probab=96.85 E-value=0.008 Score=56.96 Aligned_cols=66 Identities=21% Similarity=0.269 Sum_probs=45.6
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCcccccc-CCCCEEEEcC
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQAL-EDSDVVIIPA 104 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al-~~aDiVi~~a 104 (340)
.+++||+|||+ |.+|..++..|...+. +|..+|.+.....+.++ . +..+ ++.++.+ .++|+||++.
T Consensus 34 ~~~~kI~IIG~-G~mG~slA~~L~~~G~--~V~~~d~~~~~~~a~~~---g----v~~~---~~~~e~~~~~aDvVilav 100 (304)
T PLN02256 34 SRKLKIGIVGF-GNFGQFLAKTFVKQGH--TVLATSRSDYSDIAAEL---G----VSFF---RDPDDFCEEHPDVVLLCT 100 (304)
T ss_pred CCCCEEEEEee-CHHHHHHHHHHHhCCC--EEEEEECccHHHHHHHc---C----Ceee---CCHHHHhhCCCCEEEEec
Confidence 55689999997 9999999999987775 89999987522222221 1 1122 3444544 4799999985
No 203
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=96.85 E-value=0.01 Score=62.12 Aligned_cols=89 Identities=18% Similarity=0.164 Sum_probs=59.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCcccccc--CCCCEEEEcC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQAL--EDSDVVIIPA 104 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al--~~aDiVi~~a 104 (340)
+.|||.|+||+|++|++++..|...++ ++.+. .. |+.+.. .+...+ .+.|+||++|
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~--~v~~~-~~-------~l~d~~------------~v~~~i~~~~pd~Vih~A 436 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGI--AYEYG-KG-------RLEDRS------------SLLADIRNVKPTHVFNAA 436 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCC--eEEee-cc-------ccccHH------------HHHHHHHhhCCCEEEECC
Confidence 458999999999999999999887775 55211 10 011000 011112 2689999999
Q ss_pred CCCCCC--C---CCHHHHHHHHHHHHHHHHHHHHHhCC
Q 019519 105 GVPRKP--G---MTRDDLFNINAGIVKDLCSAIAKYCP 137 (340)
Q Consensus 105 g~~~~~--g---~~r~~~~~~N~~i~~~i~~~i~~~~p 137 (340)
+....+ + ....+.+..|+.....+++.+++.+.
T Consensus 437 a~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~ 474 (668)
T PLN02260 437 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL 474 (668)
T ss_pred cccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC
Confidence 864322 1 24566778999999999999998754
No 204
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=96.85 E-value=0.0052 Score=57.71 Aligned_cols=65 Identities=22% Similarity=0.272 Sum_probs=46.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
++||+|||. |.+|+.++..+...++ +|.++|.+..... .+.... +.. .+++.+++++||+||++.
T Consensus 2 ~~~IgviG~-G~mG~~~a~~l~~~g~--~v~~~d~~~~~~~--~~~~~g----~~~---~~~~~e~~~~~d~vi~~v 66 (296)
T PRK11559 2 TMKVGFIGL-GIMGKPMSKNLLKAGY--SLVVYDRNPEAVA--EVIAAG----AET---ASTAKAVAEQCDVIITML 66 (296)
T ss_pred CceEEEEcc-CHHHHHHHHHHHHCCC--eEEEEcCCHHHHH--HHHHCC----Cee---cCCHHHHHhcCCEEEEeC
Confidence 369999997 9999999999998887 8999998752211 122111 111 134567789999999985
No 205
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.82 E-value=0.02 Score=52.11 Aligned_cols=116 Identities=22% Similarity=0.227 Sum_probs=65.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc-HHHHHHHhcCCCCceEEEEe-cCCcc---ccc-------
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT-PGVAADVGHINTRSEVAGYM-GNDQL---GQA------- 93 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~-~~~d~---~~a------- 93 (340)
++.+++.|+||+|.+|++++..|+..+. +|+++|.++. .....++.... .++.... +-+|. .+.
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAEGA--RVVLVDRSELVHEVAAELRAAG--GEALALTADLETYAGAQAAMAAAVEA 81 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCchHHHHHHHHHHhcC--CeEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 4456899999999999999999999887 8999998752 22222332221 1222111 11221 122
Q ss_pred cCCCCEEEEcCCCCC--CC--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCcEEEEecC
Q 019519 94 LEDSDVVIIPAGVPR--KP--GMTR---DDLFNINAG----IVKDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 94 l~~aDiVi~~ag~~~--~~--g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN 146 (340)
+...|++|+.||... .+ ..+. ...+..|+- ..+.+.+.+.+.. .+.|+++|.
T Consensus 82 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS 144 (260)
T PRK12823 82 FGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSS 144 (260)
T ss_pred cCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcC
Confidence 236799999997531 11 1222 222334443 4455666665443 345666654
No 206
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.82 E-value=0.014 Score=58.75 Aligned_cols=140 Identities=18% Similarity=0.186 Sum_probs=83.0
Q ss_pred ccCccccCCCCCCCCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc---HHHHHHHhcCCCCceEEEEecCCc
Q 019519 13 AKPAGARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PGVAADVGHINTRSEVAGYMGNDQ 89 (340)
Q Consensus 13 ~~~~~~~~~~~~~~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~~~~d 89 (340)
+.|+|-+.+.... +..||.|+|+ |.+|..+|..|...|. ++.++|..+. ......|.... +....+. +
T Consensus 2 ~~~~~~~~~~~~~-~~~~v~viG~-G~~G~~~A~~L~~~G~--~V~~~d~~~~~~~~~~~~~l~~~g----v~~~~~~-~ 72 (480)
T PRK01438 2 SRPPGLTSWHSDW-QGLRVVVAGL-GVSGFAAADALLELGA--RVTVVDDGDDERHRALAAILEALG----ATVRLGP-G 72 (480)
T ss_pred CcccchhhcccCc-CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhhhHHHHHHHHHcC----CEEEECC-C
Confidence 4678877776643 4569999998 9999999988888887 8999996541 11122243322 2233222 1
Q ss_pred cccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHH--HHHHHhCCCcEEEEecCCCC--ccHHHHHHHHHHhC
Q 019519 90 LGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLC--SAIAKYCPNAIVNMISNPVN--STVPIAAEVFKKAG 163 (340)
Q Consensus 90 ~~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~--~~i~~~~p~a~viv~tNP~d--~~t~~~~~~~~~sg 163 (340)
. +...++|+||.+.|++..... ....-..+++++.+.- -.+.+...+..+|-+|=..+ +.+.+++.+++..|
T Consensus 73 ~-~~~~~~D~Vv~s~Gi~~~~~~-~~~a~~~gi~v~~~~e~~~~~~~~~~~~~~I~VTGTnGKTTTt~mi~~iL~~~g 148 (480)
T PRK01438 73 P-TLPEDTDLVVTSPGWRPDAPL-LAAAADAGIPVWGEVELAWRLRDPDRPAPWLAVTGTNGKTTTVQMLASMLRAAG 148 (480)
T ss_pred c-cccCCCCEEEECCCcCCCCHH-HHHHHHCCCeecchHHHHHHhhhccCCCCEEEEeCCCcHHHHHHHHHHHHHHcC
Confidence 1 235679999999887632211 1111234555554322 22221112445666766665 67777777787766
No 207
>PLN00016 RNA-binding protein; Provisional
Probab=96.82 E-value=0.0071 Score=58.83 Aligned_cols=35 Identities=23% Similarity=0.264 Sum_probs=31.8
Q ss_pred CCeEEEE----cCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 28 DRKVAVL----GAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 28 ~~KI~Ii----GaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
++||.|+ ||+|++|++++..|+..++ +|++++.+.
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~--~V~~l~R~~ 90 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGH--EVTLFTRGK 90 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCC--EEEEEecCC
Confidence 4799999 9999999999999998887 999999865
No 208
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.82 E-value=0.023 Score=51.07 Aligned_cols=118 Identities=18% Similarity=0.225 Sum_probs=67.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCc---ccccc------
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQ---LGQAL------ 94 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al------ 94 (340)
+..++.|+|++|.+|..++..|+..+. +|++++.+.. .....++.... .++.... +-+| +.+++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV--NVGLLARTEENLKAVAEEVEAYG--VKVVIATADVSDYEEVTAAIEQLKNE 81 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhC--CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 346899999999999999999998887 8999998752 22223333211 2333222 1112 12222
Q ss_pred -CCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCcEEEEecCCC
Q 019519 95 -EDSDVVIIPAGVPRKP---GMTR---DDLFNINAGIVKDLCSAIAKY---CPNAIVNMISNPV 148 (340)
Q Consensus 95 -~~aDiVi~~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP~ 148 (340)
.+.|+||+++|..... +.+. ...+..|..-...+.+.+..+ ...+.+++++...
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~ 145 (239)
T PRK07666 82 LGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTA 145 (239)
T ss_pred cCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchh
Confidence 3799999999864321 1222 233455665444444444332 2234555565543
No 209
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.82 E-value=0.086 Score=47.97 Aligned_cols=118 Identities=20% Similarity=0.247 Sum_probs=66.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCCc---ccccc------
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GNDQ---LGQAL------ 94 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al------ 94 (340)
+.+.+.|+||+|.+|..++..|+..|. +|+++|.++ .+....++.......++.... +-+| ..+++
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA--AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 346899999999999999999999887 899999875 233333443211112222221 1122 22222
Q ss_pred -CCCCEEEEcCCCCCC--C-CCCH---HHHHHHHHHHH----HHHHHHHHHhCCCcEEEEecCC
Q 019519 95 -EDSDVVIIPAGVPRK--P-GMTR---DDLFNINAGIV----KDLCSAIAKYCPNAIVNMISNP 147 (340)
Q Consensus 95 -~~aDiVi~~ag~~~~--~-g~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tNP 147 (340)
...|++|+.+|.... . ..+. ...+..|.... +...+.+.+. ..+.||++|..
T Consensus 84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~ 146 (260)
T PRK07063 84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER-GRGSIVNIAST 146 (260)
T ss_pred hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh-CCeEEEEECCh
Confidence 368999999986421 1 1122 22344455444 4444444433 34566666543
No 210
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.81 E-value=0.011 Score=55.28 Aligned_cols=99 Identities=17% Similarity=0.143 Sum_probs=61.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCC--cceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPL--VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~--~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
|+||+|||+ |.+|++++..|...+. ..+|.++|.+... ....+.... ..+... .|..+.++++|+||++.-
T Consensus 1 m~~I~iIG~-G~mG~ala~~L~~~g~~~~~~V~~~~r~~~~-~~~~l~~~~--~~~~~~---~~~~e~~~~aDvVilavp 73 (277)
T PRK06928 1 MEKIGFIGY-GSMADMIATKLLETEVATPEEIILYSSSKNE-HFNQLYDKY--PTVELA---DNEAEIFTKCDHSFICVP 73 (277)
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCCCcccEEEEeCCcHH-HHHHHHHHc--CCeEEe---CCHHHHHhhCCEEEEecC
Confidence 469999997 9999999999887762 2489999876421 112222111 112222 344567899999998852
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecCCCC
Q 019519 106 VPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVN 149 (340)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d 149 (340)
...+.++++.+..+- ++..+|.+.|-++
T Consensus 74 ----------------p~~~~~vl~~l~~~l~~~~~ivS~~aGi~ 102 (277)
T PRK06928 74 ----------------PLAVLPLLKDCAPVLTPDRHVVSIAAGVS 102 (277)
T ss_pred ----------------HHHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 123445555555443 4566766666654
No 211
>PRK06701 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.012 Score=55.07 Aligned_cols=118 Identities=14% Similarity=0.127 Sum_probs=70.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc---HHHHHHHhcCCCCceEEEEe-cCCc---ccccc----
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PGVAADVGHINTRSEVAGYM-GNDQ---LGQAL---- 94 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al---- 94 (340)
++.++|.|+||+|.+|++++..|+..+. ++++++.++. ......+.... .++.... +-+| +.+.+
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~--~V~l~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~i~ 119 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGA--DIAIVYLDEHEDANETKQRVEKEG--VKCLLIPGDVSDEAFCKDAVEETV 119 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHH
Confidence 3456899999999999999999998887 8999988751 22222232211 1222211 1111 11222
Q ss_pred ---CCCCEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecCC
Q 019519 95 ---EDSDVVIIPAGVPRK--P--GMTR---DDLFNINAGIVKDLCSAIAKY-CPNAIVNMISNP 147 (340)
Q Consensus 95 ---~~aDiVi~~ag~~~~--~--g~~r---~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP 147 (340)
...|+||+.+|.... + ..+. ...+..|+.....+.+.+.++ .+.+.+|++|.-
T Consensus 120 ~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~ 183 (290)
T PRK06701 120 RELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSI 183 (290)
T ss_pred HHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecc
Confidence 357999999886321 1 1222 345677877777777777654 345666666653
No 212
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=96.80 E-value=0.0052 Score=59.92 Aligned_cols=53 Identities=23% Similarity=0.455 Sum_probs=42.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
++||+||||.|.+|.+++..|...++ +|.++|.+.. ++.++++++||+||++.
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~--~V~~~d~~~~----------------------~~~~~~~~~aDlVilav 150 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGY--QVRILEQDDW----------------------DRAEDILADAGMVIVSV 150 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCC--eEEEeCCCcc----------------------hhHHHHHhcCCEEEEeC
Confidence 36999999559999999999999887 8999996420 12346688999999985
No 213
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.80 E-value=0.019 Score=52.63 Aligned_cols=117 Identities=18% Similarity=0.168 Sum_probs=67.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCccc---cc-------
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQLG---QA------- 93 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~~---~a------- 93 (340)
+.+++.|+||+|++|.+++..|+..|. +|+++|.+.. .....++.... .++.... +-+|.+ ++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA--DVLIAARTESQLDEVAEQIRAAG--RRAHVVAADLAHPEATAGLAGQAVEA 84 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 456899999999999999999998887 9999998752 22233333211 1222221 112221 11
Q ss_pred cCCCCEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----HHhCCCcEEEEecCC
Q 019519 94 LEDSDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAI----AKYCPNAIVNMISNP 147 (340)
Q Consensus 94 l~~aDiVi~~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNP 147 (340)
+...|+||+.+|..... ..+ ....+..|......+.+.. .+..+.+.+++++.-
T Consensus 85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~ 148 (263)
T PRK07814 85 FGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISST 148 (263)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccc
Confidence 23689999999853221 122 2234455655555554444 333455667777653
No 214
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.016 Score=53.77 Aligned_cols=115 Identities=18% Similarity=0.185 Sum_probs=65.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCCc---cccc-------c
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GNDQ---LGQA-------L 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l 94 (340)
.+.+.|+||+|.+|++++..|+..|. +|++.|.++ ......++.... .++.... +-+| +.+. +
T Consensus 6 ~k~vlVTGas~gIG~ala~~La~~G~--~Vv~~~r~~~~l~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 81 (275)
T PRK05876 6 GRGAVITGGASGIGLATGTEFARRGA--RVVLGDVDKPGLRQAVNHLRAEG--FDVHGVMCDVRHREEVTHLADEAFRLL 81 (275)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 35799999999999999999999887 899999875 222233343222 1222221 1112 1122 2
Q ss_pred CCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHH----HHHHHHHHhCCCcEEEEecC
Q 019519 95 EDSDVVIIPAGVPRKP---GMTR---DDLFNINAGIVK----DLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~---g~~r---~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tN 146 (340)
...|++|+.+|..... ..+. ...+..|..... .+.+.+.+....+.+++++.
T Consensus 82 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS 143 (275)
T PRK05876 82 GHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTAS 143 (275)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 3579999999864211 2222 233455554444 44444444443466666654
No 215
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=96.77 E-value=0.024 Score=59.58 Aligned_cols=118 Identities=19% Similarity=0.239 Sum_probs=65.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCCc---cccccC-----
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GNDQ---LGQALE----- 95 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al~----- 95 (340)
..++|.|+||+|.+|+.++..|+..|. +|++.|.+. ......++........+.... +-+| ..++++
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga--~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~ 490 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGA--HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA 490 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 356899999999999999999998887 899999875 222223332111001111111 1122 222332
Q ss_pred --CCCEEEEcCCCCCCC---CCCHH---HHHHHHHH----HHHHHHHHHHHhCCCcEEEEecC
Q 019519 96 --DSDVVIIPAGVPRKP---GMTRD---DLFNINAG----IVKDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 96 --~aDiVi~~ag~~~~~---g~~r~---~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN 146 (340)
+.|+||+.+|..... ..+.. ..+..|.. +.+...+.+.+....+.++++|.
T Consensus 491 ~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS 553 (676)
T TIGR02632 491 YGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIAS 553 (676)
T ss_pred cCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeC
Confidence 689999999864321 11211 12223332 34455566655544555665543
No 216
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=96.77 E-value=0.0057 Score=57.34 Aligned_cols=63 Identities=22% Similarity=0.336 Sum_probs=45.7
Q ss_pred eEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 30 KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
||+|||. |.+|+.++..|+..++ +|.++|.+... ...+.+... . . .++..+++++||+||++.
T Consensus 1 ~IgvIG~-G~mG~~iA~~l~~~G~--~V~~~dr~~~~--~~~~~~~g~---~-~---~~~~~~~~~~aDivi~~v 63 (291)
T TIGR01505 1 KVGFIGL-GIMGSPMSINLAKAGY--QLHVTTIGPEV--ADELLAAGA---V-T---AETARQVTEQADVIFTMV 63 (291)
T ss_pred CEEEEEe-cHHHHHHHHHHHHCCC--eEEEEcCCHHH--HHHHHHCCC---c-c---cCCHHHHHhcCCEEEEec
Confidence 6999998 9999999999998887 89999987522 122232221 1 1 124467889999999985
No 217
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.76 E-value=0.11 Score=47.83 Aligned_cols=116 Identities=22% Similarity=0.178 Sum_probs=65.8
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCC-ce-EEEEecCCcc----------cccc
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTR-SE-VAGYMGNDQL----------GQAL 94 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~-~~-v~~~~~~~d~----------~~al 94 (340)
+++.|+||+|.+|..++..|+..+. +|++++.++ ......++...... .. +... -+|. .+.+
T Consensus 1 k~vlItGas~giG~~la~~la~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D--~~~~~~~~~~~~~~~~~~ 76 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGA--ELFLTDRDADGLAQTVADARALGGTVPEHRALD--ISDYDAVAAFAADIHAAH 76 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEee--CCCHHHHHHHHHHHHHhc
Confidence 3799999999999999999998886 799999865 22223333322111 01 1111 1111 1223
Q ss_pred CCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHH----HHhCCCcEEEEecCCC
Q 019519 95 EDSDVVIIPAGVPRKP---GMTR---DDLFNINAGIVKDLCSAI----AKYCPNAIVNMISNPV 148 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNP~ 148 (340)
...|+||+.+|..... ..+. ...+..|..-...+.+.+ .+....+.+++++...
T Consensus 77 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~ 140 (272)
T PRK07832 77 GSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAA 140 (272)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcccc
Confidence 4689999999864221 1222 234556666555555443 3333346677666543
No 218
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.74 E-value=0.022 Score=56.11 Aligned_cols=102 Identities=19% Similarity=0.249 Sum_probs=59.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCc-eEEEEe-cCCccccccCCCCEEEEcC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRS-EVAGYM-GNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~-~v~~~~-~~~d~~~al~~aDiVi~~a 104 (340)
++++|.|+||+|.+|++++..|+..|. +++++|.++.. ....+.+..... .+.... +.++..+.+.+.|++|+.+
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~--~Vi~l~r~~~~-l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnA 253 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA--KVVALTSNSDK-ITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINH 253 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHH-HHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECC
Confidence 356899999999999999999998887 89999876421 111121111111 111111 1122334567899999998
Q ss_pred CCCCCCCCCH---HHHHHHHHHHHHHHHHH
Q 019519 105 GVPRKPGMTR---DDLFNINAGIVKDLCSA 131 (340)
Q Consensus 105 g~~~~~g~~r---~~~~~~N~~i~~~i~~~ 131 (340)
|.......+. ...+..|......+.+.
T Consensus 254 Gi~~~~~~s~e~~~~~~~vNv~g~i~Li~a 283 (406)
T PRK07424 254 GINVHGERTPEAINKSYEVNTFSAWRLMEL 283 (406)
T ss_pred CcCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 8653323332 23455566544444443
No 219
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.74 E-value=0.0027 Score=57.56 Aligned_cols=72 Identities=24% Similarity=0.354 Sum_probs=46.1
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcH-HHHHHHhcCCCCceEEEEe-cCCccccc-cCCCCEEEEcCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP-GVAADVGHINTRSEVAGYM-GNDQLGQA-LEDSDVVIIPAG 105 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~-~~~~dl~~~~~~~~v~~~~-~~~d~~~a-l~~aDiVi~~ag 105 (340)
|+++|+|+ |.+|+++|..|...++ +++++|.++.. ... +.+.....-+.+.. ...-++++ +.++|++|.+-|
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~--~Vv~Id~d~~~~~~~--~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~ 75 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGH--NVVLIDRDEERVEEF--LADELDTHVVIGDATDEDVLEEAGIDDADAVVAATG 75 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCC--ceEEEEcCHHHHHHH--hhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeC
Confidence 68999998 9999999999999998 99999998621 111 11111011122211 11122333 689999999754
No 220
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=96.73 E-value=0.0092 Score=57.21 Aligned_cols=94 Identities=18% Similarity=0.241 Sum_probs=59.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
...++|+|||. |.+|+.++..|...+. +|+.||.+.... .+. +.. ..++.+++++||+|++..-
T Consensus 144 l~g~~VgIIG~-G~IG~~vA~~L~~~G~--~V~~~d~~~~~~--~~~--------~~~---~~~l~ell~~aDiVil~lP 207 (330)
T PRK12480 144 VKNMTVAIIGT-GRIGAATAKIYAGFGA--TITAYDAYPNKD--LDF--------LTY---KDSVKEAIKDADIISLHVP 207 (330)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEeCChhHh--hhh--------hhc---cCCHHHHHhcCCEEEEeCC
Confidence 35579999998 9999999999887776 999999764211 010 111 1356788999999999752
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCC
Q 019519 106 VPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPV 148 (340)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~ 148 (340)
.. ..+..++. .+.+....|++++|+++--.
T Consensus 208 ~t-----------~~t~~li~--~~~l~~mk~gavlIN~aRG~ 237 (330)
T PRK12480 208 AN-----------KESYHLFD--KAMFDHVKKGAILVNAARGA 237 (330)
T ss_pred Cc-----------HHHHHHHh--HHHHhcCCCCcEEEEcCCcc
Confidence 11 11222221 12333334788888876543
No 221
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=96.73 E-value=0.014 Score=52.32 Aligned_cols=115 Identities=23% Similarity=0.331 Sum_probs=64.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCc---ccc-------c
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQ---LGQ-------A 93 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d---~~~-------a 93 (340)
+.+++.|+||+|.+|+.++..|+..+. .+.+.+.+.. .....++. .++.... +-+| +.+ .
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA--IVGLHGTRVEKLEALAAELG-----ERVKIFPANLSDRDEVKALGQKAEAD 77 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHhC-----CceEEEEccCCCHHHHHHHHHHHHHH
Confidence 456999999999999999999998886 7888776542 22222221 1122211 1112 111 1
Q ss_pred cCCCCEEEEcCCCCCCC---CC---CHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEecCCC
Q 019519 94 LEDSDVVIIPAGVPRKP---GM---TRDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISNPV 148 (340)
Q Consensus 94 l~~aDiVi~~ag~~~~~---g~---~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP~ 148 (340)
+...|+||+.+|..... .. .-...+..|......+++.+.+. .+.+.+++++...
T Consensus 78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~ 141 (245)
T PRK12936 78 LEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVV 141 (245)
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHH
Confidence 34689999999864321 11 12334556666555555544322 2345666666543
No 222
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.69 E-value=0.016 Score=53.99 Aligned_cols=67 Identities=10% Similarity=0.217 Sum_probs=46.2
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCC--cceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPL--VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~--~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
+||+|||+ |.+|++++..|...++ ..+|..+|.++.. ...+.+.. . +... ++..+.+++||+||++.
T Consensus 3 ~~IgfIG~-G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~--~~~l~~~~-g--~~~~---~~~~e~~~~aDiIiLav 71 (272)
T PRK12491 3 KQIGFIGC-GNMGIAMIGGMINKNIVSPDQIICSDLNVSN--LKNASDKY-G--ITIT---TNNNEVANSADILILSI 71 (272)
T ss_pred CeEEEECc-cHHHHHHHHHHHHCCCCCCceEEEECCCHHH--HHHHHHhc-C--cEEe---CCcHHHHhhCCEEEEEe
Confidence 58999997 9999999999988774 3579999876422 22232211 1 2222 23456789999999985
No 223
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.026 Score=51.82 Aligned_cols=117 Identities=20% Similarity=0.213 Sum_probs=66.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCc---cccc-------c
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQ---LGQA-------L 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l 94 (340)
..+|.|+||+|.+|+.++..|+..+. +|+++|.+.. .....++.... .++.... +-+| +.++ +
T Consensus 9 ~k~ilItGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 9 GKNVVVVGGTSGINLGIAQAFARAGA--NVAVASRSQEKVDAAVAQLQQAG--PEGLGVSADVRDYAAVEAAFAQIADEF 84 (264)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhC--CceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999998887 8999997652 22222333211 1121111 1111 2222 2
Q ss_pred CCCCEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHHHh--CCCcEEEEecCCC
Q 019519 95 EDSDVVIIPAGVPRKP---GMTRD---DLFNINAGIVKDLCSAIAKY--CPNAIVNMISNPV 148 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~---g~~r~---~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tNP~ 148 (340)
...|++|+.+|..... ..+.. ..+..|..-...+.+....+ .+++.++++|.+.
T Consensus 85 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~ 146 (264)
T PRK07576 85 GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQ 146 (264)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChh
Confidence 3569999998753211 22222 23445665555555444332 1346777777654
No 224
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.68 E-value=0.038 Score=50.35 Aligned_cols=34 Identities=35% Similarity=0.349 Sum_probs=31.0
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
++|.|+||+|.+|..++..|+..+. +|+++|.+.
T Consensus 3 ~~vlItGas~gIG~~la~~l~~~G~--~v~~~~r~~ 36 (257)
T PRK07024 3 LKVFITGASSGIGQALAREYARQGA--TLGLVARRT 36 (257)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 5899999999999999999998887 899999875
No 225
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.68 E-value=0.031 Score=50.42 Aligned_cols=115 Identities=19% Similarity=0.158 Sum_probs=66.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCccc---c-------cc
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQLG---Q-------AL 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~~---~-------al 94 (340)
.+++.|+||+|.+|.+++..|+..+. +|+++|.++. .....++.+.. .++.... +-+|.. + .+
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (250)
T PRK07774 6 DKVAIVTGAAGGIGQAYAEALAREGA--SVVVADINAEGAERVAKQIVADG--GTAIAVQVDVSDPDSAKAMADATVSAF 81 (250)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 35899999999999999999998887 8999998752 22222332211 1111111 112221 1 12
Q ss_pred CCCCEEEEcCCCCC----CC--CCCH---HHHHHHHHHHHHHHHHHHHHhC---CCcEEEEecC
Q 019519 95 EDSDVVIIPAGVPR----KP--GMTR---DDLFNINAGIVKDLCSAIAKYC---PNAIVNMISN 146 (340)
Q Consensus 95 ~~aDiVi~~ag~~~----~~--g~~r---~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tN 146 (340)
...|+||+++|... .+ ..+. ...+..|......+.+.+.++. +.+.++++|.
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 145 (250)
T PRK07774 82 GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSS 145 (250)
T ss_pred CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEec
Confidence 36899999998632 11 1222 2344566666666555555442 2356666653
No 226
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=96.67 E-value=0.0078 Score=56.71 Aligned_cols=64 Identities=19% Similarity=0.288 Sum_probs=46.5
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
+||+|||. |.+|..++..|+..++ +|.++|+++.. ..++.... ... .+++.+++++||+||++.
T Consensus 2 ~~Ig~IGl-G~mG~~mA~~l~~~G~--~V~v~d~~~~~--~~~~~~~g----~~~---~~s~~~~~~~aDvVi~~v 65 (296)
T PRK15461 2 AAIAFIGL-GQMGSPMASNLLKQGH--QLQVFDVNPQA--VDALVDKG----ATP---AASPAQAAAGAEFVITML 65 (296)
T ss_pred CeEEEEee-CHHHHHHHHHHHHCCC--eEEEEcCCHHH--HHHHHHcC----Ccc---cCCHHHHHhcCCEEEEec
Confidence 59999998 9999999999998887 89999987522 22232211 111 134467789999999984
No 227
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.67 E-value=0.014 Score=52.17 Aligned_cols=115 Identities=21% Similarity=0.262 Sum_probs=62.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc---HHHHHHHhcCCCCceEEEEe-cCCc---cccc-----
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PGVAADVGHINTRSEVAGYM-GNDQ---LGQA----- 93 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~-~~~d---~~~a----- 93 (340)
+++++|.|+||+|.+|+.++..|.+.++ ++.+...... .....++.... .++.... +-.| +.+.
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~ 79 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGA--DVVVHYRSDEEAAEELVEAVEALG--RRAQAVQADVTDKAALEAAVAAAV 79 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCCHHHHHHHHHHHHhcC--CceEEEECCcCCHHHHHHHHHHHH
Confidence 3456999999999999999999999887 6666554431 11222222211 1222221 1111 1122
Q ss_pred --cCCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHH----HHhCCCcEEEEec
Q 019519 94 --LEDSDVVIIPAGVPRKP---GMTR---DDLFNINAGIVKDLCSAI----AKYCPNAIVNMIS 145 (340)
Q Consensus 94 --l~~aDiVi~~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~t 145 (340)
+.+.|+||+++|..... +.+. ...+..|......+.+.+ ++.. ...++++|
T Consensus 80 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~S 142 (249)
T PRK12825 80 ERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNIS 142 (249)
T ss_pred HHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEC
Confidence 24679999999853221 1222 334555666555555555 4333 33455454
No 228
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=96.66 E-value=0.0045 Score=57.72 Aligned_cols=91 Identities=13% Similarity=0.131 Sum_probs=59.3
Q ss_pred EEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccC--CCCEEEEcCCCCCC-
Q 019519 33 VLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALE--DSDVVIIPAGVPRK- 109 (340)
Q Consensus 33 IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~--~aDiVi~~ag~~~~- 109 (340)
|+||+|++|++++..|...+. +++++.... ..|+.+ ..++.+.++ +.|+||++|+....
T Consensus 2 ItGa~GfiG~~l~~~L~~~g~--~v~~~~~~~----~~Dl~~------------~~~l~~~~~~~~~d~Vih~A~~~~~~ 63 (306)
T PLN02725 2 VAGHRGLVGSAIVRKLEALGF--TNLVLRTHK----ELDLTR------------QADVEAFFAKEKPTYVILAAAKVGGI 63 (306)
T ss_pred cccCCCcccHHHHHHHHhCCC--cEEEeeccc----cCCCCC------------HHHHHHHHhccCCCEEEEeeeeeccc
Confidence 899999999999999988775 555443211 011211 112333333 57999999976421
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEE
Q 019519 110 --PGMTRDDLFNINAGIVKDLCSAIAKYCPNAIV 141 (340)
Q Consensus 110 --~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~v 141 (340)
......+++..|......+++.+++...+-+|
T Consensus 64 ~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i 97 (306)
T PLN02725 64 HANMTYPADFIRENLQIQTNVIDAAYRHGVKKLL 97 (306)
T ss_pred chhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEE
Confidence 12334567788999999999999987644333
No 229
>PLN02712 arogenate dehydrogenase
Probab=96.65 E-value=0.012 Score=61.57 Aligned_cols=66 Identities=18% Similarity=0.195 Sum_probs=45.7
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCcccccc-CCCCEEEEcC
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQAL-EDSDVVIIPA 104 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al-~~aDiVi~~a 104 (340)
.+++||+|||. |.+|..++..|...++ +|..+|.+.....+.++ . +..+ +|+.+.+ ++||+||++.
T Consensus 50 ~~~~kIgIIG~-G~mG~slA~~L~~~G~--~V~~~dr~~~~~~A~~~---G----v~~~---~d~~e~~~~~aDvViLav 116 (667)
T PLN02712 50 TTQLKIAIIGF-GNYGQFLAKTLISQGH--TVLAHSRSDHSLAARSL---G----VSFF---LDPHDLCERHPDVILLCT 116 (667)
T ss_pred CCCCEEEEEcc-CHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHc---C----CEEe---CCHHHHhhcCCCEEEEcC
Confidence 46689999997 9999999999988876 89999987422222221 1 2222 3444534 5799999984
No 230
>PTZ00431 pyrroline carboxylate reductase; Provisional
Probab=96.64 E-value=0.011 Score=54.63 Aligned_cols=91 Identities=13% Similarity=0.257 Sum_probs=57.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCc--ceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLV--SRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~--~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
..|||+|||+ |.+|++++..|...+.. .+++.+|.++.. + .+... .+..+.++++|+||++.
T Consensus 2 ~~mkI~iIG~-G~mG~ai~~~l~~~~~~~~~~i~~~~~~~~~-----~-------~~~~~---~~~~~~~~~~D~Vilav 65 (260)
T PTZ00431 2 ENIRVGFIGL-GKMGSALAYGIENSNIIGKENIYYHTPSKKN-----T-------PFVYL---QSNEELAKTCDIIVLAV 65 (260)
T ss_pred CCCEEEEECc-cHHHHHHHHHHHhCCCCCcceEEEECCChhc-----C-------CeEEe---CChHHHHHhCCEEEEEe
Confidence 4579999997 99999999999887643 358888865411 0 11221 23356678999999984
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCC
Q 019519 105 GVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVN 149 (340)
Q Consensus 105 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d 149 (340)
.| ..+.++++.+..+-++..+|.+.+-+.
T Consensus 66 -kp---------------~~~~~vl~~i~~~l~~~~iIS~~aGi~ 94 (260)
T PTZ00431 66 -KP---------------DLAGKVLLEIKPYLGSKLLISICGGLN 94 (260)
T ss_pred -CH---------------HHHHHHHHHHHhhccCCEEEEEeCCcc
Confidence 12 234444445544333345566666665
No 231
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.017 Score=52.45 Aligned_cols=114 Identities=23% Similarity=0.310 Sum_probs=65.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc-HHHHHHHhcCCCCceEEEEe-cCCc---cccc-------c
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT-PGVAADVGHINTRSEVAGYM-GNDQ---LGQA-------L 94 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l 94 (340)
+.++|.|+||+|.+|++++..|++.+. +|++.+.+.. .....++... ++.... +-+| +.+. +
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~----~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA--RVALLDRSEDVAEVAAQLLGG----NAKGLVCDVSDSQSVEAAVAAVISAF 87 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHhhCC----ceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 346899999999999999999998887 8999998652 2222222211 111111 1112 1121 2
Q ss_pred CCCCEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCcEEEEecC
Q 019519 95 EDSDVVIIPAGVPRK-P--GMTR---DDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~-~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 146 (340)
...|+||+.+|.... + ..+. ...+..|..-...+.+.+..+ ...+.++++|.
T Consensus 88 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 148 (255)
T PRK06841 88 GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLAS 148 (255)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence 367999999986431 1 1111 234556666655555555443 22456666654
No 232
>KOG2305 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=96.63 E-value=0.0024 Score=57.12 Aligned_cols=105 Identities=18% Similarity=0.294 Sum_probs=66.2
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC------cHHHHH---HHhcCC-CCceEEE------EecCCcccc
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN------TPGVAA---DVGHIN-TRSEVAG------YMGNDQLGQ 92 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~------~~~~~~---dl~~~~-~~~~v~~------~~~~~d~~~ 92 (340)
-||+|+|. |.+|++.|..++..|+ ++.||||.+ .+.... +|+... ...+++. .++++++.+
T Consensus 4 ~ki~ivgS-gl~g~~WAmlFAs~Gy--qVqlYDI~e~Ql~~ALen~~Kel~~Lee~g~lrGnlsa~eqla~is~t~~l~E 80 (313)
T KOG2305|consen 4 GKIAIVGS-GLVGSSWAMLFASSGY--QVQLYDILEKQLQTALENVEKELRKLEEHGLLRGNLSADEQLALISGTTSLNE 80 (313)
T ss_pred cceeEeec-ccccchHHHHHhccCc--eEEEeeccHHHHHHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhCCccHHH
Confidence 49999996 9999999999999999 999999986 122222 333222 1111111 123467777
Q ss_pred ccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecCCCCccH
Q 019519 93 ALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNSTV 152 (340)
Q Consensus 93 al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t 152 (340)
..++|=+|-.++ .+.+...+.+.+++++.. |.. |..|.....|.
T Consensus 81 ~vk~Ai~iQEcv--------------pE~L~lkk~ly~qlD~i~d~~t--IlaSSTSt~mp 125 (313)
T KOG2305|consen 81 LVKGAIHIQECV--------------PEDLNLKKQLYKQLDEIADPTT--ILASSTSTFMP 125 (313)
T ss_pred HHhhhhhHHhhc--------------hHhhHHHHHHHHHHHHhcCCce--EEeccccccCh
Confidence 777774433332 355677788888888876 443 33555554443
No 233
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.083 Score=47.58 Aligned_cols=115 Identities=20% Similarity=0.185 Sum_probs=64.1
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCCccc----------cccC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GNDQLG----------QALE 95 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~d~~----------~al~ 95 (340)
+++.|+||+|.+|.+++..|+..+. ++++.+.+. ......++.......++.... +-+|.+ +.+.
T Consensus 3 k~vlItGas~giG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK08251 3 QKILITGASSGLGAGMAREFAAKGR--DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG 80 (248)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999998886 899999875 222223333211111232221 112221 2234
Q ss_pred CCCEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHH----HHhCCCcEEEEecC
Q 019519 96 DSDVVIIPAGVPRKPG---MT---RDDLFNINAGIVKDLCSAI----AKYCPNAIVNMISN 146 (340)
Q Consensus 96 ~aDiVi~~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tN 146 (340)
..|+||+.+|...... .+ -...+..|......+.+.+ .+.. ...++++|.
T Consensus 81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS 140 (248)
T PRK08251 81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISS 140 (248)
T ss_pred CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEec
Confidence 6899999998643221 11 1223455655444444443 3333 334555543
No 234
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=96.63 E-value=0.037 Score=50.01 Aligned_cols=117 Identities=21% Similarity=0.228 Sum_probs=66.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCC--c----------cc
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GND--Q----------LG 91 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~--d----------~~ 91 (340)
+.++|.|+|++|++|.+++..|+..+. +|+++|.+. ......++.+... .++.... +-+ + +.
T Consensus 11 ~~k~vlItG~~g~iG~~la~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 11 KDRIILVTGAGDGIGREAALTYARHGA--TVILLGRTEEKLEAVYDEIEAAGG-PQPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHhcCC-CCceEEEecccCCCHHHHHHHHHHHH
Confidence 346999999999999999999998886 899999875 2233344443321 1111111 000 1 12
Q ss_pred cccCCCCEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHH---hCCCcEEEEecC
Q 019519 92 QALEDSDVVIIPAGVPRK--P--GMTR---DDLFNINAGIVKDLCSAIAK---YCPNAIVNMISN 146 (340)
Q Consensus 92 ~al~~aDiVi~~ag~~~~--~--g~~r---~~~~~~N~~i~~~i~~~i~~---~~p~a~viv~tN 146 (340)
+.+...|+||+.+|.... + ..+. ...+..|......+.+.+.. ..+.+.++++|.
T Consensus 88 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss 152 (247)
T PRK08945 88 EQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSS 152 (247)
T ss_pred HHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEcc
Confidence 233468999999886322 1 2222 23455666654444444432 224456665654
No 235
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.0098 Score=54.89 Aligned_cols=111 Identities=14% Similarity=0.023 Sum_probs=62.0
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEe-cCCcc---cc-------ccCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-GNDQL---GQ-------ALEDS 97 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~~~d~---~~-------al~~a 97 (340)
+.|.|+||+|.+|++++..|+..+. +|++.+.+.... .++.+... ..+..+. +-+|. .+ .+...
T Consensus 4 k~vlItGasg~iG~~~a~~l~~~g~--~V~~~~r~~~~~--~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 78 (275)
T PRK08263 4 KVWFITGASRGFGRAWTEAALERGD--RVVATARDTATL--ADLAEKYG-DRLLPLALDVTDRAAVFAAVETAVEHFGRL 78 (275)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEECCHHHH--HHHHHhcc-CCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999998886 899999765211 11111110 1111111 11121 11 12467
Q ss_pred CEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHHhCCCcEEEEec
Q 019519 98 DVVIIPAGVPRKP---GMT---RDDLFNINAGI----VKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 98 DiVi~~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~t 145 (340)
|.||+++|..... ..+ -...+..|+.- .+.+.+.+++.... .+|++|
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~vs 135 (275)
T PRK08263 79 DIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSG-HIIQIS 135 (275)
T ss_pred CEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-EEEEEc
Confidence 9999999875321 112 23345566655 45555555554433 455554
No 236
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=96.62 E-value=0.015 Score=54.47 Aligned_cols=65 Identities=25% Similarity=0.328 Sum_probs=48.2
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
+||++||- |.+|+.++..|...|+ ++..+|.+..+. +..+..... ... .+..++.++||+||...
T Consensus 1 ~kIafIGL-G~MG~pmA~~L~~aG~--~v~v~~r~~~ka-~~~~~~~Ga--~~a-----~s~~eaa~~aDvVitmv 65 (286)
T COG2084 1 MKIAFIGL-GIMGSPMAANLLKAGH--EVTVYNRTPEKA-AELLAAAGA--TVA-----ASPAEAAAEADVVITML 65 (286)
T ss_pred CeEEEEcC-chhhHHHHHHHHHCCC--EEEEEeCChhhh-hHHHHHcCC--ccc-----CCHHHHHHhCCEEEEec
Confidence 58999998 9999999999999998 999999876332 222332221 111 23368899999999985
No 237
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.61 E-value=0.022 Score=54.14 Aligned_cols=94 Identities=18% Similarity=0.248 Sum_probs=60.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
....+|+|+|. |.+|+.++..|..-|. +|..+|...... . . +.......++++.+++||+|+++.-
T Consensus 134 l~g~tvgIvG~-G~IG~~vA~~l~afG~--~V~~~~~~~~~~-----~--~----~~~~~~~~~l~e~l~~aDvvv~~lP 199 (312)
T PRK15469 134 REDFTIGILGA-GVLGSKVAQSLQTWGF--PLRCWSRSRKSW-----P--G----VQSFAGREELSAFLSQTRVLINLLP 199 (312)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCCCCC-----C--C----ceeecccccHHHHHhcCCEEEECCC
Confidence 34579999998 9999999999987776 899999643110 0 0 0111112356788999999999842
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecC
Q 019519 106 VPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN 146 (340)
.. ..|..++- .+.+....|++++||++-
T Consensus 200 lt-----------~~T~~li~--~~~l~~mk~ga~lIN~aR 227 (312)
T PRK15469 200 NT-----------PETVGIIN--QQLLEQLPDGAYLLNLAR 227 (312)
T ss_pred CC-----------HHHHHHhH--HHHHhcCCCCcEEEECCC
Confidence 21 12223332 334454557899988853
No 238
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.60 E-value=0.017 Score=53.41 Aligned_cols=112 Identities=12% Similarity=0.063 Sum_probs=63.8
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEe-cCCcccccc--------CCCCE
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-GNDQLGQAL--------EDSDV 99 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~~~d~~~al--------~~aDi 99 (340)
++|.|+||+|.+|..++..|+..|. +|++.+.+.... .++..... ..+.... ...++++++ ...|+
T Consensus 5 k~vlItGasggiG~~la~~l~~~G~--~Vi~~~r~~~~~--~~l~~~~~-~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~ 79 (277)
T PRK05993 5 RSILITGCSSGIGAYCARALQSDGW--RVFATCRKEEDV--AALEAEGL-EAFQLDYAEPESIAALVAQVLELSGGRLDA 79 (277)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHH--HHHHHCCc-eEEEccCCCHHHHHHHHHHHHHHcCCCccE
Confidence 4799999999999999999998887 899999865211 12222111 0111110 001111222 24699
Q ss_pred EEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHHhCCCcEEEEecC
Q 019519 100 VIIPAGVPRKP---GMT---RDDLFNINAGI----VKDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 100 Vi~~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN 146 (340)
||+.+|..... +.+ -...+..|... .+.+.+.+++.. .+.||++|.
T Consensus 80 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS 135 (277)
T PRK05993 80 LFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSS 135 (277)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECC
Confidence 99998864321 122 23345566654 566666666543 345666654
No 239
>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=96.60 E-value=0.029 Score=54.30 Aligned_cols=113 Identities=19% Similarity=0.241 Sum_probs=70.4
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHH----------HH----hcCCCCceEEEEecCCcccccc
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAA----------DV----GHINTRSEVAGYMGNDQLGQAL 94 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~----------dl----~~~~~~~~v~~~~~~~d~~~al 94 (340)
++|+|+|- |.||..+|..++..|+ .++=+|+++..-..+ ++ ...-...+++.+ +|. +.+
T Consensus 10 ~~I~ViGL-GYVGLPlA~~fA~~G~--~ViG~DIn~~~Vd~ln~G~~~i~e~~~~~~v~~~v~~g~lraT---td~-~~l 82 (436)
T COG0677 10 ATIGVIGL-GYVGLPLAAAFASAGF--KVIGVDINQKKVDKLNRGESYIEEPDLDEVVKEAVESGKLRAT---TDP-EEL 82 (436)
T ss_pred eEEEEEcc-ccccHHHHHHHHHcCC--ceEeEeCCHHHHHHHhCCcceeecCcHHHHHHHHHhcCCceEe---cCh-hhc
Confidence 79999998 9999999999999998 899999986211000 01 111113456664 465 557
Q ss_pred CCCCEEEEcCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEE--ecCCCCccHHHH
Q 019519 95 EDSDVVIIPAGVPRKP-GMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNM--ISNPVNSTVPIA 155 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~-g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv--~tNP~d~~t~~~ 155 (340)
+.||++|++.=.|.+. .+.. +..+..-++.|.++=.++-+++ .|-|.+..-.++
T Consensus 83 ~~~dv~iI~VPTPl~~~~~pD-------ls~v~~aa~sIa~~L~kG~LVIlEST~~PGTTe~v~ 139 (436)
T COG0677 83 KECDVFIICVPTPLKKYREPD-------LSYVESAARSIAPVLKKGDLVILESTTPPGTTEEVV 139 (436)
T ss_pred ccCCEEEEEecCCcCCCCCCC-------hHHHHHHHHHHHHhcCCCCEEEEecCCCCCcHHHHH
Confidence 8999999997666544 2323 3334444555555543333333 466766554443
No 240
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.60 E-value=0.015 Score=52.30 Aligned_cols=117 Identities=18% Similarity=0.176 Sum_probs=65.3
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEe-cCCcccccc---CCCCEEE
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-GNDQLGQAL---EDSDVVI 101 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~~~d~~~al---~~aDiVi 101 (340)
++.+++.|+||+|.+|+.++..|+..+. +|++++.+.... .++.+......+.... ...++.+++ ...|+||
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~--~V~~~~r~~~~~--~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi 82 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRGA--RVVAAARNAAAL--DRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLV 82 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEE
Confidence 3456999999999999999999998887 899999765211 1222111000111110 111122223 3579999
Q ss_pred EcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHh----CCCcEEEEecC
Q 019519 102 IPAGVPRKP---GMTR---DDLFNINAGIVKDLCSAIAKY----CPNAIVNMISN 146 (340)
Q Consensus 102 ~~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~tN 146 (340)
+.+|..... ..+. ...+..|..-...+.+.+.+. +..+.++++|.
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS 137 (245)
T PRK07060 83 NCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSS 137 (245)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEcc
Confidence 999864321 1222 233456666655555555443 22356666653
No 241
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.60 E-value=0.04 Score=50.17 Aligned_cols=117 Identities=19% Similarity=0.269 Sum_probs=66.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEe-cCCc---cccc-------cCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-GNDQ---LGQA-------LED 96 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l~~ 96 (340)
.+++.|+||+|.+|..++..|+..|. +|++++.++.......+.... .++.... +-+| ..+. +..
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 83 (251)
T PRK12481 8 GKVAIITGCNTGLGQGMAIGLAKAGA--DIVGVGVAEAPETQAQVEALG--RKFHFITADLIQQKDIDSIVSQAVEVMGH 83 (251)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCchHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence 35889999999999999999999887 899988754322222232211 1222211 1112 2222 235
Q ss_pred CCEEEEcCCCCCCC---CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCcEEEEecCCC
Q 019519 97 SDVVIIPAGVPRKP---GMTR---DDLFNINAG----IVKDLCSAIAKYCPNAIVNMISNPV 148 (340)
Q Consensus 97 aDiVi~~ag~~~~~---g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNP~ 148 (340)
.|++|+.+|..... ..+. ...+..|+. +.+.+.+.+.+....+.||+++...
T Consensus 84 iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~ 145 (251)
T PRK12481 84 IDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASML 145 (251)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChh
Confidence 79999999864321 1122 223445544 4455555555443346777666543
No 242
>PRK12937 short chain dehydrogenase; Provisional
Probab=96.59 E-value=0.034 Score=49.92 Aligned_cols=115 Identities=16% Similarity=0.147 Sum_probs=65.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc---HHHHHHHhcCCCCceEEEEe-cCC---cccccc------
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PGVAADVGHINTRSEVAGYM-GND---QLGQAL------ 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~-~~~---d~~~al------ 94 (340)
..+|.|+||+|.+|+.++..|+..+. ++++++.+.. .....++.... .++.... +-+ ++++++
T Consensus 5 ~~~vlItG~~~~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (245)
T PRK12937 5 NKVAIVTGASRGIGAAIARRLAADGF--AVAVNYAGSAAAADELVAEIEAAG--GRAIAVQADVADAAAVTRLFDAAETA 80 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 35899999999999999999999887 7877765431 22222333221 1232221 111 222333
Q ss_pred -CCCCEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecC
Q 019519 95 -EDSDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAIAKY-CPNAIVNMISN 146 (340)
Q Consensus 95 -~~aDiVi~~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tN 146 (340)
...|+||+.+|..... ..+ -...+..|+.....+.+.+.+. .+.+.++++|.
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss 140 (245)
T PRK12937 81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLST 140 (245)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEee
Confidence 3689999999864211 111 2234556666555555555433 24567776654
No 243
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.59 E-value=0.015 Score=54.82 Aligned_cols=64 Identities=17% Similarity=0.239 Sum_probs=43.2
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccC---CCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALE---DSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~---~aDiVi~~a 104 (340)
|||+|||. |.+|+.++..|...++ +|.++|.++... .++.+.. +... .++.+.++ ++|+|+++.
T Consensus 1 m~Ig~IGl-G~MG~~mA~~L~~~g~--~v~v~dr~~~~~--~~~~~~g----~~~~---~~~~e~~~~~~~~dvvi~~v 67 (301)
T PRK09599 1 MQLGMIGL-GRMGGNMARRLLRGGH--EVVGYDRNPEAV--EALAEEG----ATGA---DSLEELVAKLPAPRVVWLMV 67 (301)
T ss_pred CEEEEEcc-cHHHHHHHHHHHHCCC--eEEEEECCHHHH--HHHHHCC----Ceec---CCHHHHHhhcCCCCEEEEEe
Confidence 58999998 9999999999998887 899999875222 2222221 1111 23344444 479988874
No 244
>PRK07856 short chain dehydrogenase; Provisional
Probab=96.59 E-value=0.031 Score=50.69 Aligned_cols=111 Identities=15% Similarity=0.090 Sum_probs=64.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEe-cCC---cccccc-------C
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-GND---QLGQAL-------E 95 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~~~---d~~~al-------~ 95 (340)
+.+++.|+||+|.+|..++..|+..+. +|+++|.+... ... . ..+.... +-. ++++.+ .
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~--~v~~~~r~~~~----~~~--~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 74 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA--TVVVCGRRAPE----TVD--G--RPAEFHAADVRDPDQVAALVDAIVERHG 74 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCChhh----hhc--C--CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 346899999999999999999998887 89999976422 111 1 1122111 111 222233 3
Q ss_pred CCCEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHH----hCCCcEEEEecCC
Q 019519 96 DSDVVIIPAGVPRK-P--GMT---RDDLFNINAGIVKDLCSAIAK----YCPNAIVNMISNP 147 (340)
Q Consensus 96 ~aDiVi~~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~----~~p~a~viv~tNP 147 (340)
..|+||+.+|.... + ..+ ....+..|+.....+.+.+.. ....+.+|++|.-
T Consensus 75 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~ 136 (252)
T PRK07856 75 RLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSV 136 (252)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccc
Confidence 45999999985321 1 112 233455666655555555433 2234667766653
No 245
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.58 E-value=0.019 Score=52.18 Aligned_cols=115 Identities=21% Similarity=0.270 Sum_probs=65.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCcc---cc-------cc
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQL---GQ-------AL 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~---~~-------al 94 (340)
..++.|+||+|.+|.+++..|+..+. ++++.|.++. .....++.+... ++.... +-+|. .+ .+
T Consensus 9 ~k~~lItGas~giG~~ia~~L~~~G~--~vvl~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 9 GKNILITGSAQGIGFLLATGLAEYGA--EIIINDITAERAELAVAKLRQEGI--KAHAAPFNVTHKQEVEAAIEHIEKDI 84 (254)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHHHHHhcCC--eEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 45899999999999999999998887 8999998752 233334443221 222111 11121 11 12
Q ss_pred CCCCEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEecC
Q 019519 95 EDSDVVIIPAGVPRK-P--GMT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 146 (340)
...|+||+.+|.... + ..+ -...+..|......+.+.+.++ ...+.++++|.
T Consensus 85 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS 145 (254)
T PRK08085 85 GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICS 145 (254)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence 357999999986421 1 122 2234556655544444444433 23456666654
No 246
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=96.58 E-value=0.045 Score=51.77 Aligned_cols=119 Identities=14% Similarity=0.102 Sum_probs=69.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCC----CCceEEEEecCCccccccCCCCEEEEc
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHIN----TRSEVAGYMGNDQLGQALEDSDVVIIP 103 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~----~~~~v~~~~~~~d~~~al~~aDiVi~~ 103 (340)
.|||+|+|+ |.||+.++..|...+. +|.|++....+-.++.-.+.. ............+ .+.....|+||++
T Consensus 2 ~m~I~IiGa-GaiG~~~a~~L~~~G~--~V~lv~r~~~~~~~i~~~~Gl~i~~~g~~~~~~~~~~~-~~~~~~~D~viv~ 77 (305)
T PRK05708 2 SMTWHILGA-GSLGSLWACRLARAGL--PVRLILRDRQRLAAYQQAGGLTLVEQGQASLYAIPAET-ADAAEPIHRLLLA 77 (305)
T ss_pred CceEEEECC-CHHHHHHHHHHHhCCC--CeEEEEechHHHHHHhhcCCeEEeeCCcceeeccCCCC-cccccccCEEEEE
Confidence 379999998 9999999999998876 899999753111111001100 0000000000011 1234678999998
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec
Q 019519 104 AGVPRKPGMTRDDLFNINAGIVKDLCSAIAKY-CPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV 173 (340)
Q Consensus 104 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~ 173 (340)
.- ... ..+..+.+..+ .+++.++.+-|=++....+. +. ++.+++++-
T Consensus 78 vK---------------~~~-~~~al~~l~~~l~~~t~vv~lQNGv~~~e~l~----~~---~~~~~v~~g 125 (305)
T PRK05708 78 CK---------------AYD-AEPAVASLAHRLAPGAELLLLQNGLGSQDAVA----AR---VPHARCIFA 125 (305)
T ss_pred CC---------------HHh-HHHHHHHHHhhCCCCCEEEEEeCCCCCHHHHH----Hh---CCCCcEEEE
Confidence 51 111 22334445544 37888888999988765542 22 666777754
No 247
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.57 E-value=0.046 Score=49.55 Aligned_cols=115 Identities=17% Similarity=0.154 Sum_probs=66.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCcc---cc-------cc
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQL---GQ-------AL 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~---~~-------al 94 (340)
.++|.|+||+|.+|++++..|+..+. +|+++|.++. .....++.... .++.... +-+|. +. .+
T Consensus 5 ~k~vlItGa~~~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 5 GKVVVVSGVGPGLGRTLAVRAARAGA--DVVLAARTAERLDEVAAEIDDLG--RRALAVPTDITDEDQCANLVALALERF 80 (258)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHhC--CceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999887 8999998752 22223333211 1122111 11221 11 12
Q ss_pred CCCCEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHHhC--CCcEEEEecC
Q 019519 95 EDSDVVIIPAGVPRK--P--GMTR---DDLFNINAGIVKDLCSAIAKYC--PNAIVNMISN 146 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~--~--g~~r---~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tN 146 (340)
...|+||+.+|.... + ..+. ...+..|+.-...+.+.+.++- ..+.+|++|.
T Consensus 81 g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS 141 (258)
T PRK07890 81 GRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINS 141 (258)
T ss_pred CCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEec
Confidence 468999999986422 1 2222 2335566665555555554431 1246666654
No 248
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=96.57 E-value=0.034 Score=50.15 Aligned_cols=113 Identities=19% Similarity=0.213 Sum_probs=63.6
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCcc----------ccccC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQL----------GQALE 95 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~----------~~al~ 95 (340)
++|.|+||+|++|+.++..|+..+. +|++++.+.. .....++.... .++.... +-.|. .+.+.
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA--NVVVNDLGEAGAEAAAKVATDAG--GSVIYLVADVTKEDEIADMIAAAAAEFG 77 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4799999999999999999998887 8999998752 12222222211 1222211 11221 22346
Q ss_pred CCCEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHH----HHhCCCcEEEEecC
Q 019519 96 DSDVVIIPAGVPRK-P--GMTR---DDLFNINAGIVKDLCSAI----AKYCPNAIVNMISN 146 (340)
Q Consensus 96 ~aDiVi~~ag~~~~-~--g~~r---~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tN 146 (340)
+.|+||+.+|.... + ..+. ...+..|......+.+.+ ++.. ...++++|.
T Consensus 78 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss 137 (255)
T TIGR01963 78 GLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIAS 137 (255)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcc
Confidence 78999999886421 1 1121 233445665544444444 4433 235555553
No 249
>PRK12827 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.05 Score=48.82 Aligned_cols=117 Identities=20% Similarity=0.308 Sum_probs=67.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--c----HHHHHHHhcCCCCceEEEEe-cCCc---ccccc--
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--T----PGVAADVGHINTRSEVAGYM-GNDQ---LGQAL-- 94 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~----~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al-- 94 (340)
++++|.|+||+|++|+.++..|+..+. ++++++... . .....++.... .++.... +-.| +++.+
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~ 80 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGA--DVIVLDIHPMRGRAEADAVAAGIEAAG--GKALGLAFDVRDFAATRAALDA 80 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEcCcccccHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHH
Confidence 357999999999999999999998887 889987642 1 11112222111 1222221 1112 11222
Q ss_pred -----CCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHH-H---hCCCcEEEEecCC
Q 019519 95 -----EDSDVVIIPAGVPRKP---GMTR---DDLFNINAGIVKDLCSAIA-K---YCPNAIVNMISNP 147 (340)
Q Consensus 95 -----~~aDiVi~~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~-~---~~p~a~viv~tNP 147 (340)
...|+||+.+|..... ..+. ...+..|......+++.+. . ......+++++..
T Consensus 81 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~ 148 (249)
T PRK12827 81 GVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASV 148 (249)
T ss_pred HHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCc
Confidence 4689999999864321 1222 2345677777777777765 1 1223455555543
No 250
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.56 E-value=0.026 Score=49.00 Aligned_cols=33 Identities=36% Similarity=0.633 Sum_probs=29.4
Q ss_pred eEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 30 KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
||+|+|+ |.+|+.++..|+..|. .++.|+|.+.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gv-g~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGV-GNLKLVDFDV 33 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCC-CeEEEEeCCE
Confidence 6899998 9999999999998875 5899999874
No 251
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.55 E-value=0.033 Score=50.76 Aligned_cols=116 Identities=16% Similarity=0.173 Sum_probs=67.1
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCcc---ccc-------cC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQL---GQA-------LE 95 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~---~~a-------l~ 95 (340)
++|.|+||+|.+|+.++..|+..+. +|+++|.++. +....++.... .++.... +-.|. .++ +.
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 77 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA--QLVLAARNETRLASLAQELADHG--GEALVVPTDVSDAEACERLIEAAVARFG 77 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4899999999999999999998887 8999998752 22223343322 1232221 11221 111 23
Q ss_pred CCCEEEEcCCCCCCC---CC-CH---HHHHHHHHHHHHHHHHHHHHhC--CCcEEEEecCCC
Q 019519 96 DSDVVIIPAGVPRKP---GM-TR---DDLFNINAGIVKDLCSAIAKYC--PNAIVNMISNPV 148 (340)
Q Consensus 96 ~aDiVi~~ag~~~~~---g~-~r---~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tNP~ 148 (340)
+.|+||+++|..... .. +. ...+..|......+.+.+..+- ..+.+++++...
T Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~ 139 (263)
T PRK06181 78 GIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLA 139 (263)
T ss_pred CCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEeccc
Confidence 679999998864321 11 22 2335566666666655554321 235666665543
No 252
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.55 E-value=0.044 Score=51.34 Aligned_cols=36 Identities=17% Similarity=0.261 Sum_probs=31.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
..++|.|+||+|.+|..++..|+..|. +|+++|.+.
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~--~Vi~~~R~~ 74 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA--TVVAVARRE 74 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCH
Confidence 346899999999999999999998887 899999875
No 253
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.54 E-value=0.015 Score=53.28 Aligned_cols=112 Identities=19% Similarity=0.162 Sum_probs=63.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCc---cccc-------c
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQ---LGQA-------L 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l 94 (340)
.+++.|+||+|.+|..++..|+..|. +|++.|.+.. .....++. .++.... +-+| +++. +
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGA--RVAIVDIDADNGAAVAASLG-----ERARFIATDITDDAAIERAVATVVARF 78 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhC-----CeeEEEEecCCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999887 8999998752 22222221 1122111 1112 2222 2
Q ss_pred CCCCEEEEcCCCCCCC--CCCH---HHHHHHHHHHHHHHHHHHHHh--CCCcEEEEecC
Q 019519 95 EDSDVVIIPAGVPRKP--GMTR---DDLFNINAGIVKDLCSAIAKY--CPNAIVNMISN 146 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~--g~~r---~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tN 146 (340)
...|++|+.+|..... ..+. ...+..|+.-...+.+.+..+ .+.+.+|+++.
T Consensus 79 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS 137 (261)
T PRK08265 79 GRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTS 137 (261)
T ss_pred CCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECc
Confidence 3679999999864322 2222 233444655444444433322 34566666654
No 254
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.54 E-value=0.05 Score=49.44 Aligned_cols=117 Identities=16% Similarity=0.123 Sum_probs=66.0
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc-HHHHHHHhcCCCCceEEEEe-cCCc---ccccc-----
Q 019519 25 SVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT-PGVAADVGHINTRSEVAGYM-GNDQ---LGQAL----- 94 (340)
Q Consensus 25 ~~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al----- 94 (340)
+++..+|.|+||+|.+|..++..|+..+. ++++.+.++. .....++.... .++.... +-+| +...+
T Consensus 4 ~l~~~~ilItGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (258)
T PRK08628 4 NLKDKVVIVTGGASGIGAAISLRLAEEGA--IPVIFGRSAPDDEFAEELRALQ--PRAEFVQVDLTDDAQCRDAVEQTVA 79 (258)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHcCC--cEEEEcCChhhHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHH
Confidence 34556999999999999999999998887 7888887662 22223333222 1222221 1112 22223
Q ss_pred --CCCCEEEEcCCCCCCCC--C---CHHHHHHHHHHHHHHHHHHHHHhC--CCcEEEEec
Q 019519 95 --EDSDVVIIPAGVPRKPG--M---TRDDLFNINAGIVKDLCSAIAKYC--PNAIVNMIS 145 (340)
Q Consensus 95 --~~aDiVi~~ag~~~~~g--~---~r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~t 145 (340)
...|+||+.+|...... . .-...+..|......+.+...++- ..+.+++++
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~s 139 (258)
T PRK08628 80 KFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNIS 139 (258)
T ss_pred hcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEEC
Confidence 25799999998642221 1 122345566665555555444321 234455444
No 255
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=96.54 E-value=0.0077 Score=50.45 Aligned_cols=118 Identities=17% Similarity=0.212 Sum_probs=70.1
Q ss_pred EEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcC-----CCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHI-----NTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 31 I~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~-----~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
|+|+|+ |.+|..++..|.+.+. ++.|++... ......-... .....+.......+.....+.+|+||++.-
T Consensus 1 I~I~G~-GaiG~~~a~~L~~~g~--~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGA-GAIGSLYAARLAQAGH--DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEEST-SHHHHHHHHHHHHTTC--EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SS
T ss_pred CEEECc-CHHHHHHHHHHHHCCC--ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcchhccCCCcEEEEEec
Confidence 789998 9999999999998887 899999754 2221111111 101111111111111135689999999852
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec-cc
Q 019519 106 VPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TT 175 (340)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~-~~ 175 (340)
.. -..+..+.++.+. |++.++.+-|=++....+. +. +++.++++- +.
T Consensus 77 a~----------------~~~~~l~~l~~~~~~~t~iv~~qNG~g~~~~l~----~~---~~~~~v~~g~~~ 125 (151)
T PF02558_consen 77 AY----------------QLEQALQSLKPYLDPNTTIVSLQNGMGNEEVLA----EY---FPRPRVLGGVTT 125 (151)
T ss_dssp GG----------------GHHHHHHHHCTGEETTEEEEEESSSSSHHHHHH----CH---STGSGEEEEEEE
T ss_pred cc----------------chHHHHHHHhhccCCCcEEEEEeCCCCcHHHHH----HH---cCCCcEEEEEEe
Confidence 11 1233555566665 6778888899887665442 22 566787654 44
No 256
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.53 E-value=0.036 Score=49.57 Aligned_cols=117 Identities=20% Similarity=0.294 Sum_probs=65.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc---HHHHHHHhcCCCCceEEEEe-cCCc---cccc------
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PGVAADVGHINTRSEVAGYM-GNDQ---LGQA------ 93 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~-~~~d---~~~a------ 93 (340)
+.++|.|+|++|++|+.++..|+..+. ++++...+.. .....++.... .++.... +-.| +.++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA--NVVINYASSEAGAEALVAEIGALG--GKALAVQGDVSDAESVERAVDEAKA 79 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCchhHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHH
Confidence 346999999999999999999998887 7766665442 12222232211 1222211 1111 1111
Q ss_pred -cCCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHhC---CCcEEEEecCC
Q 019519 94 -LEDSDVVIIPAGVPRKP---GMTR---DDLFNINAGIVKDLCSAIAKYC---PNAIVNMISNP 147 (340)
Q Consensus 94 -l~~aDiVi~~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tNP 147 (340)
+.+.|+||+++|..... ..+. ...+..|......+.+.+..+. +.+.++++|..
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~ 143 (248)
T PRK05557 80 EFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSV 143 (248)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEccc
Confidence 23689999998864321 1122 2234567776666666666542 23456655543
No 257
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.055 Score=48.98 Aligned_cols=113 Identities=18% Similarity=0.195 Sum_probs=62.0
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCC---ccccccC-CCCEEE
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GND---QLGQALE-DSDVVI 101 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~---d~~~al~-~aDiVi 101 (340)
++|.|+||+|.+|+.++..|+..+. ++++.+.+.. .....+...... .+.... +-+ ++..++. +.|+||
T Consensus 3 ~~vlVtGasg~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~id~vi 78 (257)
T PRK09291 3 KTILITGAGSGFGREVALRLARKGH--NVIAGVQIAPQVTALRAEAARRGL--ALRVEKLDLTDAIDRAQAAEWDVDVLL 78 (257)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCC--cceEEEeeCCCHHHHHHHhcCCCCEEE
Confidence 4799999999999999999998886 8888887642 111111111111 122111 112 2233344 899999
Q ss_pred EcCCCCCCC---CCCHH---HHHHHHHHH----HHHHHHHHHHhCCCcEEEEecC
Q 019519 102 IPAGVPRKP---GMTRD---DLFNINAGI----VKDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 102 ~~ag~~~~~---g~~r~---~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN 146 (340)
+.+|.+... ..+.. ..+..|... .+.+.+.+.+... +.+|++|.
T Consensus 79 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~~SS 132 (257)
T PRK09291 79 NNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGK-GKVVFTSS 132 (257)
T ss_pred ECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-ceEEEEcC
Confidence 999865321 11221 223344443 3344444444433 56666653
No 258
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=96.53 E-value=0.0013 Score=61.55 Aligned_cols=98 Identities=26% Similarity=0.271 Sum_probs=58.9
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPR 108 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~~~ 108 (340)
|||.|+||+|++|+++...|...++ +++.++..+ .|+.+.. .+. ++-+. .+.|+||++|+...
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~--~v~~~~r~~-----~dl~d~~---~~~------~~~~~-~~pd~Vin~aa~~~ 63 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGY--EVIATSRSD-----LDLTDPE---AVA------KLLEA-FKPDVVINCAAYTN 63 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSE--EEEEESTTC-----S-TTSHH---HHH------HHHHH-H--SEEEE------
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCC--EEEEeCchh-----cCCCCHH---HHH------HHHHH-hCCCeEeccceeec
Confidence 7999999999999999999988776 788886542 1222111 000 01111 25789999997642
Q ss_pred CC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 109 KP--GMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 109 ~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
.. ..........|......+++...+. ++.+|.+|
T Consensus 64 ~~~ce~~p~~a~~iN~~~~~~la~~~~~~--~~~li~~S 100 (286)
T PF04321_consen 64 VDACEKNPEEAYAINVDATKNLAEACKER--GARLIHIS 100 (286)
T ss_dssp HHHHHHSHHHHHHHHTHHHHHHHHHHHHC--T-EEEEEE
T ss_pred HHhhhhChhhhHHHhhHHHHHHHHHHHHc--CCcEEEee
Confidence 21 1235566778999999999998876 44555554
No 259
>PRK12746 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.046 Score=49.48 Aligned_cols=115 Identities=16% Similarity=0.178 Sum_probs=63.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEe-CCCc--HHHHHHHhcCCCCceEEEEe-cCCcc---cccc------
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYD-IANT--PGVAADVGHINTRSEVAGYM-GNDQL---GQAL------ 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D-~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~---~~al------ 94 (340)
.++|.|+||+|.+|++++..|+..+. ++.+.+ .+.. .....++.... .++.... +-+|. .+++
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~G~--~v~i~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~d~~~i~~~~~~~~~~ 81 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLANDGA--LVAIHYGRNKQAADETIREIESNG--GKAFLIEADLNSIDGVKKLVEQLKNE 81 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCcCCHHHHHHHHHHHHHH
Confidence 46999999999999999999998886 776654 3321 12222232111 1222211 11221 1112
Q ss_pred -------CCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecC
Q 019519 95 -------EDSDVVIIPAGVPRKP---GMTR---DDLFNINAGIVKDLCSAIAKYC-PNAIVNMISN 146 (340)
Q Consensus 95 -------~~aDiVi~~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN 146 (340)
.+.|+||+++|..... ..+. ...+..|+.....+.+.+.++. ..+.++++|.
T Consensus 82 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS 147 (254)
T PRK12746 82 LQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISS 147 (254)
T ss_pred hccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 2689999999864321 1121 3344567776666666666543 2345555553
No 260
>PRK05650 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.039 Score=50.64 Aligned_cols=114 Identities=20% Similarity=0.169 Sum_probs=64.4
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCcc---ccc-------cC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQL---GQA-------LE 95 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~---~~a-------l~ 95 (340)
++|.|+||+|.+|+.++..|+..+. +|++.|.+.. +....++..... ++.... +-+|. .+. +.
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~i~~~~~ 76 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGW--RLALADVNEEGGEETLKLLREAGG--DGFYQRCDVRDYSQLTALAQACEEKWG 76 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCC--ceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3799999999999999999999887 8999997652 222233432221 222111 11221 121 23
Q ss_pred CCCEEEEcCCCCCCC---CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCcEEEEecCC
Q 019519 96 DSDVVIIPAGVPRKP---GMTR---DDLFNINAG----IVKDLCSAIAKYCPNAIVNMISNP 147 (340)
Q Consensus 96 ~aDiVi~~ag~~~~~---g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNP 147 (340)
..|+||+.+|..... ..+. ...+..|.. ..+.+.+.+++.. .+.++++|..
T Consensus 77 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~ 137 (270)
T PRK05650 77 GIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASM 137 (270)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECCh
Confidence 689999999864321 1222 223455644 4444555555443 3456656543
No 261
>PRK09134 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.038 Score=50.36 Aligned_cols=114 Identities=18% Similarity=0.165 Sum_probs=63.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC---cHHHHHHHhcCCCCceEEEEe-cCCc---ccccc------
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN---TPGVAADVGHINTRSEVAGYM-GNDQ---LGQAL------ 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al------ 94 (340)
.+++.|+||+|.+|.+++..|...+. .+++.+... ......++.+.. .++.... +-+| +.+++
T Consensus 9 ~k~vlItGas~giG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~~~~ 84 (258)
T PRK09134 9 PRAALVTGAARRIGRAIALDLAAHGF--DVAVHYNRSRDEAEALAAEIRALG--RRAVALQADLADEAEVRALVARASAA 84 (258)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999988886 787776543 122222232221 2232221 1122 11222
Q ss_pred -CCCCEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHHhC---CCcEEEEec
Q 019519 95 -EDSDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAIAKYC---PNAIVNMIS 145 (340)
Q Consensus 95 -~~aDiVi~~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~t 145 (340)
...|+||+.+|..... ..+ -...+..|+.-...+.+.+..+. ..+.+++++
T Consensus 85 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~ 145 (258)
T PRK09134 85 LGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMI 145 (258)
T ss_pred cCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEEC
Confidence 3479999999864221 222 23445667665555655555432 234555443
No 262
>PRK08589 short chain dehydrogenase; Validated
Probab=96.48 E-value=0.17 Score=46.62 Aligned_cols=116 Identities=18% Similarity=0.231 Sum_probs=66.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC-cHHHHHHHhcCCCCceEEEEe-cCCcc---ccc-------c
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYM-GNDQL---GQA-------L 94 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~-~~~d~---~~a-------l 94 (340)
+.+++.|+||+|.+|..++..|+..+. +|+++|.++ ......++.+... ++.... +-+|. .+. +
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~--~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA--YVLAVDIAEAVSETVDKIKSNGG--KAKAYHVDISDEQQVKDFASEIKEQF 80 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCcHHHHHHHHHHHhcCC--eEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 345899999999999999999998887 899999874 2223334433221 222111 11121 111 2
Q ss_pred CCCCEEEEcCCCCCCCC----CCH---HHHHHHHHH----HHHHHHHHHHHhCCCcEEEEecCCC
Q 019519 95 EDSDVVIIPAGVPRKPG----MTR---DDLFNINAG----IVKDLCSAIAKYCPNAIVNMISNPV 148 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~g----~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNP~ 148 (340)
...|++|+.+|.....+ .+. ...+..|+. +.+.+.+.+.+. .+.+++++...
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~isS~~ 143 (272)
T PRK08589 81 GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ--GGSIINTSSFS 143 (272)
T ss_pred CCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEeCchh
Confidence 35799999998743211 122 122334443 445555555433 36777776543
No 263
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=96.48 E-value=0.0095 Score=49.42 Aligned_cols=73 Identities=21% Similarity=0.363 Sum_probs=50.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
..|+.|+|| |.+|..++..|...+. .+|.+++++.. +..+..+. ...+.... .+++.+.+.++|+||.+-+
T Consensus 12 ~~~vlviGa-Gg~ar~v~~~L~~~g~-~~i~i~nRt~~ra~~l~~~~~----~~~~~~~~-~~~~~~~~~~~DivI~aT~ 84 (135)
T PF01488_consen 12 GKRVLVIGA-GGAARAVAAALAALGA-KEITIVNRTPERAEALAEEFG----GVNIEAIP-LEDLEEALQEADIVINATP 84 (135)
T ss_dssp TSEEEEESS-SHHHHHHHHHHHHTTS-SEEEEEESSHHHHHHHHHHHT----GCSEEEEE-GGGHCHHHHTESEEEE-SS
T ss_pred CCEEEEECC-HHHHHHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHcC----ccccceee-HHHHHHHHhhCCeEEEecC
Confidence 469999998 9999999999998864 57999998642 23333331 12333332 2466677899999999865
Q ss_pred CC
Q 019519 106 VP 107 (340)
Q Consensus 106 ~~ 107 (340)
.+
T Consensus 85 ~~ 86 (135)
T PF01488_consen 85 SG 86 (135)
T ss_dssp TT
T ss_pred CC
Confidence 44
No 264
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.013 Score=53.24 Aligned_cols=37 Identities=22% Similarity=0.309 Sum_probs=32.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
++..+|.|+||+|.+|.+++..++..+. +++++|.+.
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~--~v~~~~r~~ 41 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGA--TVVVGDIDP 41 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCH
Confidence 3456999999999999999999998887 899999875
No 265
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.47 E-value=0.02 Score=50.88 Aligned_cols=37 Identities=27% Similarity=0.535 Sum_probs=31.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
.+..||.|+|+ |.+|+.++..|+..|. .+|.|+|.+.
T Consensus 19 l~~~~VlviG~-GglGs~ia~~La~~Gv-~~i~lvD~d~ 55 (202)
T TIGR02356 19 LLNSHVLIIGA-GGLGSPAALYLAGAGV-GTIVIVDDDH 55 (202)
T ss_pred hcCCCEEEECC-CHHHHHHHHHHHHcCC-CeEEEecCCE
Confidence 44579999998 9999999999998885 6899999873
No 266
>PRK08507 prephenate dehydrogenase; Validated
Probab=96.47 E-value=0.013 Score=54.61 Aligned_cols=66 Identities=23% Similarity=0.362 Sum_probs=43.5
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
|||+|||. |.+|.+++..|...++..+|+.+|.++.. ...+..... +... .++.+ +.+||+||++.
T Consensus 1 m~I~iIG~-G~mG~sla~~l~~~g~~~~v~~~d~~~~~--~~~~~~~g~---~~~~---~~~~~-~~~aD~Vilav 66 (275)
T PRK08507 1 MKIGIIGL-GLMGGSLGLALKEKGLISKVYGYDHNELH--LKKALELGL---VDEI---VSFEE-LKKCDVIFLAI 66 (275)
T ss_pred CEEEEEcc-CHHHHHHHHHHHhcCCCCEEEEEcCCHHH--HHHHHHCCC---Cccc---CCHHH-HhcCCEEEEeC
Confidence 58999997 99999999999988765578889987521 111222111 1111 23334 45699999985
No 267
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.057 Score=50.68 Aligned_cols=117 Identities=21% Similarity=0.144 Sum_probs=66.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCcc---ccc-------
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQL---GQA------- 93 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~---~~a------- 93 (340)
+.++|.|+||+|.+|+.++..|+..+. +|++++.+.. .....++.......++.... +-.|. +++
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA--HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence 346899999999999999999998887 8999987652 21222333211111232221 11221 111
Q ss_pred cCCCCEEEEcCCCCCCC-C---CCHHHHHHHHHHH----HHHHHHHHHHhCCCcEEEEecC
Q 019519 94 LEDSDVVIIPAGVPRKP-G---MTRDDLFNINAGI----VKDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 94 l~~aDiVi~~ag~~~~~-g---~~r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN 146 (340)
+...|+||+.||....+ . ..-...+..|... .+.+.+.+++. ..+.||++|.
T Consensus 93 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS 152 (306)
T PRK06197 93 YPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-PGSRVVTVSS 152 (306)
T ss_pred CCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEECC
Confidence 23589999999863211 1 1112234455544 66666666654 3456666654
No 268
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=96.46 E-value=0.037 Score=49.90 Aligned_cols=115 Identities=17% Similarity=0.293 Sum_probs=65.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC---cHHHHHHHhcCCCCceEEEEe-cCCc---ccccc------
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN---TPGVAADVGHINTRSEVAGYM-GNDQ---LGQAL------ 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al------ 94 (340)
...+.|+||+|.+|++++..|+..+. ++++.+... ......++.+.. .++.... +-+| +.+++
T Consensus 6 ~~~~lItG~s~~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (247)
T PRK12935 6 GKVAIVTGGAKGIGKAITVALAQEGA--KVVINYNSSKEAAENLVNELGKEG--HDVYAVQADVSKVEDANRLVEEAVNH 81 (247)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC--EEEEEcCCcHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45899999999999999999998886 776655432 122223343221 1232221 1122 11222
Q ss_pred -CCCCEEEEcCCCCCCCC------CCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEecC
Q 019519 95 -EDSDVVIIPAGVPRKPG------MTRDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (340)
Q Consensus 95 -~~aDiVi~~ag~~~~~g------~~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 146 (340)
...|+||+.+|...... +.-.+.+..|..-...+.+.+..+ ...+.+++++.
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 143 (247)
T PRK12935 82 FGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISS 143 (247)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence 34799999998643211 112344566776666655555543 23456666654
No 269
>PRK06101 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.06 Score=48.55 Aligned_cols=114 Identities=19% Similarity=0.158 Sum_probs=64.4
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCC-ceEEEEe-cCCccccccC----CCCEEEE
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTR-SEVAGYM-GNDQLGQALE----DSDVVII 102 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~-~~v~~~~-~~~d~~~al~----~aDiVi~ 102 (340)
.++.|+||+|.+|..++..|+..|. +++++|.++... .++...... ..+.... ...+.+++++ ..|.+|+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~--~V~~~~r~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~ 77 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW--QVIACGRNQSVL--DELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF 77 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC--EEEEEECCHHHH--HHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence 4799999999999999999998887 899999875211 112111100 0111111 1122223333 2478888
Q ss_pred cCCCCCCC--C-CCH---HHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecC
Q 019519 103 PAGVPRKP--G-MTR---DDLFNINAGIVKDLCSAIAKYC-PNAIVNMISN 146 (340)
Q Consensus 103 ~ag~~~~~--g-~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN 146 (340)
.+|..... . .+. ...+.-|......+.+.+..+- +...+++++.
T Consensus 78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS 128 (240)
T PRK06101 78 NAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGS 128 (240)
T ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEec
Confidence 77743211 1 222 2346677777777777766542 3455665554
No 270
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=96.44 E-value=0.019 Score=52.15 Aligned_cols=118 Identities=12% Similarity=0.090 Sum_probs=67.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCC---cccccc------
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GND---QLGQAL------ 94 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~---d~~~al------ 94 (340)
+.++|.|+||+|.+|+.++..|+..+. +|+++|.++ ......++..... ++.... +-+ ++.+++
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA--HVLVNGRNAATLEAAVAALRAAGG--AAEALAFDIADEEAVAAAFARIDAE 85 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhcCC--ceEEEEccCCCHHHHHHHHHHHHHh
Confidence 457999999999999999999998887 899999875 2233333432211 122211 111 222222
Q ss_pred -CCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCcEEEEecCCC
Q 019519 95 -EDSDVVIIPAGVPRKP---GMTR---DDLFNINAGIVKDLCSAIAKY---CPNAIVNMISNPV 148 (340)
Q Consensus 95 -~~aDiVi~~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP~ 148 (340)
...|+||+.+|..... ..+. ...+..|..-...+++.+.++ ...+.+++++...
T Consensus 86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 149 (256)
T PRK06124 86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIA 149 (256)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeech
Confidence 3458999998864211 1222 234556666555555444321 2345677676544
No 271
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=96.44 E-value=0.14 Score=46.69 Aligned_cols=156 Identities=14% Similarity=0.147 Sum_probs=93.4
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCC-CceEEEEecC-------CccccccCCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINT-RSEVAGYMGN-------DQLGQALEDSD 98 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~-~~~v~~~~~~-------~d~~~al~~aD 98 (340)
+-+.|+||++-+|..++..|...|. .++|...+. ++..+.++.+... ...+..+ +. ..+.+.+.+.|
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G~--~vvl~aRR~drL~~la~~~~~~~~~~~~~DVt-D~~~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAGA--KVVLAARREERLEALADEIGAGAALALALDVT-DRAAVEAAIEALPEEFGRID 83 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCCC--eEEEEeccHHHHHHHHHhhccCceEEEeeccC-CHHHHHHHHHHHHHhhCccc
Confidence 3578889999999999999999998 999999876 4666666764111 1111110 11 11234567899
Q ss_pred EEEEcCCCCCCCC------CCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCc
Q 019519 99 VVIIPAGVPRKPG------MTRDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKK 169 (340)
Q Consensus 99 iVi~~ag~~~~~g------~~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~k 169 (340)
++|..||..+... .+...++..|+..+......+-.. ...+.||+++.=.... . +|...
T Consensus 84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~----------~--y~~~~ 151 (246)
T COG4221 84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRY----------P--YPGGA 151 (246)
T ss_pred EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccc----------c--CCCCc
Confidence 9999999754321 124456777887666655544322 2456888887555322 1 66677
Q ss_pred eEeccchhHHHHHHHHHHHcCCCCCCCceeEE
Q 019519 170 LFGVTTLDVVRAKTFYAGKANVNVAEVNVPVV 201 (340)
Q Consensus 170 viG~~~ld~~R~~~~la~~l~v~~~~v~~~v~ 201 (340)
+++-|.--..-|...|-+.+ ..+.|++..+
T Consensus 152 vY~ATK~aV~~fs~~LR~e~--~g~~IRVt~I 181 (246)
T COG4221 152 VYGATKAAVRAFSLGLRQEL--AGTGIRVTVI 181 (246)
T ss_pred cchhhHHHHHHHHHHHHHHh--cCCCeeEEEe
Confidence 77765322222222232222 2466666555
No 272
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.43 E-value=0.023 Score=53.55 Aligned_cols=64 Identities=14% Similarity=0.302 Sum_probs=43.6
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCC---CCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALED---SDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~---aDiVi~~a 104 (340)
|||+|||. |.+|+.++..|...++ +|+++|.++... ..+.+.. .... .++++.+++ +|+||++.
T Consensus 1 m~Ig~IGl-G~mG~~mA~~L~~~g~--~v~v~dr~~~~~--~~~~~~g----~~~~---~s~~~~~~~~~~advVi~~v 67 (299)
T PRK12490 1 MKLGLIGL-GKMGGNMAERLREDGH--EVVGYDVNQEAV--DVAGKLG----ITAR---HSLEELVSKLEAPRTIWVMV 67 (299)
T ss_pred CEEEEEcc-cHHHHHHHHHHHhCCC--EEEEEECCHHHH--HHHHHCC----Ceec---CCHHHHHHhCCCCCEEEEEe
Confidence 58999998 9999999999998887 899999875222 2232221 1211 234555554 68998874
No 273
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.41 E-value=0.03 Score=53.06 Aligned_cols=114 Identities=14% Similarity=0.076 Sum_probs=64.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCcc---cccc-------
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQL---GQAL------- 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~---~~al------- 94 (340)
+++|.|+||+|.+|..++..|+..+. +|++.+.+.. .....++.... .++.... +-+|. ++++
T Consensus 6 ~k~vlVTGas~gIG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 6 KGTVIITGASSGVGLYAAKALAKRGW--HVIMACRNLKKAEAAAQELGIPP--DSYTIIHIDLGDLDSVRRFVDDFRALG 81 (322)
T ss_pred CCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhccC--CceEEEEecCCCHHHHHHHHHHHHHhC
Confidence 45899999999999999999998886 8999987652 22223332211 1222211 11221 1222
Q ss_pred CCCCEEEEcCCCCCC----CCCCH---HHHHHHHHHH----HHHHHHHHHHhCC-CcEEEEec
Q 019519 95 EDSDVVIIPAGVPRK----PGMTR---DDLFNINAGI----VKDLCSAIAKYCP-NAIVNMIS 145 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~----~g~~r---~~~~~~N~~i----~~~i~~~i~~~~p-~a~viv~t 145 (340)
...|++|+.||.... ...+. ...+..|... .+.+.+.+.+... .+.||++|
T Consensus 82 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vs 144 (322)
T PRK07453 82 KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILG 144 (322)
T ss_pred CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEc
Confidence 248999999985321 12222 2345566654 4444455544432 34566655
No 274
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.061 Score=48.46 Aligned_cols=113 Identities=19% Similarity=0.167 Sum_probs=63.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCcc---cccc-------
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQL---GQAL------- 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~---~~al------- 94 (340)
.+++.|+||+|.+|+.++..|+..+. ++++++.+.. .....++. . ..++.... +-+|. .+++
T Consensus 5 ~k~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~-~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~ 79 (252)
T PRK06138 5 GRVAIVTGAGSGIGRATAKLFAREGA--RVVVADRDAEAAERVAAAIA-A--GGRAFARQGDVGSAEAVEALVDFVAARW 79 (252)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCC--eEEEecCCHHHHHHHHHHHh-c--CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999998886 8999987652 22222232 1 11222221 11221 1222
Q ss_pred CCCCEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHH----HHHHHHHhCCCcEEEEecC
Q 019519 95 EDSDVVIIPAGVPRKP---GMTRD---DLFNINAGIVKD----LCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~---g~~r~---~~~~~N~~i~~~----i~~~i~~~~p~a~viv~tN 146 (340)
.+.|+||+.+|..... ..+.. ..+..|...... +.+.+++.. .+.++++|.
T Consensus 80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS 140 (252)
T PRK06138 80 GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTAS 140 (252)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECC
Confidence 3789999999864211 12222 234556554443 344444333 345555553
No 275
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.037 Score=50.29 Aligned_cols=112 Identities=26% Similarity=0.240 Sum_probs=62.1
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCcc---ccccC-------
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQL---GQALE------- 95 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~---~~al~------- 95 (340)
.++.|+||+|.+|..++..|+..+. +|+++|.+.. .....++.+. ++.... +-.|. ..+++
T Consensus 3 k~ilItGat~~iG~~la~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (257)
T PRK07074 3 RTALVTGAAGGIGQALARRFLAAGD--RVLALDIDAAALAAFADALGDA----RFVPVACDLTDAASLAAALANAAAERG 76 (257)
T ss_pred CEEEEECCcchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcCC----ceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999998886 8999997652 2222233211 222111 11222 12232
Q ss_pred CCCEEEEcCCCCCCCC---CCHH---HHHHHHHHHHHHHHHHHHHh---CCCcEEEEecC
Q 019519 96 DSDVVIIPAGVPRKPG---MTRD---DLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (340)
Q Consensus 96 ~aDiVi~~ag~~~~~g---~~r~---~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 146 (340)
+.|+||+.+|...... .+.. ..+..|......+.+.+... ...+.+++++.
T Consensus 77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS 136 (257)
T PRK07074 77 PVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGS 136 (257)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcc
Confidence 5799999998642211 1222 22345555444455444322 23455665654
No 276
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.024 Score=51.02 Aligned_cols=111 Identities=21% Similarity=0.223 Sum_probs=65.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCccc----------ccc
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQLG----------QAL 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~~----------~al 94 (340)
.++|.|+||+|.+|+.++..|+..+. ++++++.++. .....++. .++.... +..|.+ +.+
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (249)
T PRK06500 6 GKTALITGGTSGIGLETARQFLAEGA--RVAITGRDPASLEAARAELG-----ESALVIRADAGDVAAQKALAQALAEAF 78 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHhC-----CceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 45999999999999999999999887 8999988652 11111121 1222111 112211 123
Q ss_pred CCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHh-CCCcEEEEec
Q 019519 95 EDSDVVIIPAGVPRKP---GMTR---DDLFNINAGIVKDLCSAIAKY-CPNAIVNMIS 145 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~t 145 (340)
...|+||+.+|..... ..+. ...+..|+.....+.+.+..+ ...+.+++++
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~ 136 (249)
T PRK06500 79 GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNG 136 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 4689999999864321 1122 234567777777777777643 1223444444
No 277
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.054 Score=49.17 Aligned_cols=114 Identities=20% Similarity=0.217 Sum_probs=64.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCCc---ccc-------cc
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GNDQ---LGQ-------AL 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~d---~~~-------al 94 (340)
.+++.|+||+|.+|..++..|+..|. +|++.+.+. .+....++.+.. .++.... +-+| ..+ .+
T Consensus 9 ~k~vlVtGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 9 GKRALITGASTGIGKRVALAYVEAGA--QVAIAARHLDALEKLADEIGTSG--GKVVPVCCDVSQHQQVTSMLDQVTAEL 84 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 45899999999999999999999887 899999875 223333343322 1222211 1112 111 13
Q ss_pred CCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHH----HHHHHHhCCCcEEEEec
Q 019519 95 EDSDVVIIPAGVPRKP---GMTR---DDLFNINAGIVKDL----CSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~---g~~r---~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~t 145 (340)
...|++|+.+|..... ..+. ...+..|+.....+ .+.+.+....+.+++++
T Consensus 85 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~s 145 (253)
T PRK05867 85 GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTA 145 (253)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEEC
Confidence 4789999999864321 1222 22344555544444 44444333345566554
No 278
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=96.38 E-value=0.022 Score=54.09 Aligned_cols=101 Identities=25% Similarity=0.374 Sum_probs=63.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
.++|+|+|+ |.+|..++..|...+ ..+|.++|.+.. ...+..+. ..+... +++++++.++|+||.+.+
T Consensus 178 ~~~V~ViGa-G~iG~~~a~~L~~~g-~~~V~v~~r~~~ra~~la~~~g-----~~~~~~---~~~~~~l~~aDvVi~at~ 247 (311)
T cd05213 178 GKKVLVIGA-GEMGELAAKHLAAKG-VAEITIANRTYERAEELAKELG-----GNAVPL---DELLELLNEADVVISATG 247 (311)
T ss_pred CCEEEEECc-HHHHHHHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHcC-----CeEEeH---HHHHHHHhcCCEEEECCC
Confidence 479999998 999999988887644 348999998752 22233222 122211 356677899999999877
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecCCCCccHH
Q 019519 106 VPRKPGMTRDDLFNINAGIVKDLCSAIAKY-CPNAIVNMISNPVNSTVP 153 (340)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP~d~~t~ 153 (340)
.|.. ..++... ++.. .+..+++-+++|-|+=..
T Consensus 248 ~~~~------------~~~~~~~---~~~~~~~~~~viDlavPrdi~~~ 281 (311)
T cd05213 248 APHY------------AKIVERA---MKKRSGKPRLIVDLAVPRDIEPE 281 (311)
T ss_pred CCch------------HHHHHHH---HhhCCCCCeEEEEeCCCCCCchh
Confidence 6531 1111111 1111 245688889999885543
No 279
>PRK09186 flagellin modification protein A; Provisional
Probab=96.38 E-value=0.037 Score=50.11 Aligned_cols=35 Identities=23% Similarity=0.248 Sum_probs=31.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
.++|.|+||+|.+|.+++..|+..+. ++++.+.+.
T Consensus 4 ~k~vlItGas~giG~~~a~~l~~~g~--~v~~~~r~~ 38 (256)
T PRK09186 4 GKTILITGAGGLIGSALVKAILEAGG--IVIAADIDK 38 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEecCh
Confidence 46899999999999999999998887 899998765
No 280
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.37 E-value=0.091 Score=49.71 Aligned_cols=171 Identities=14% Similarity=0.089 Sum_probs=84.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCccc----------cc
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQLG----------QA 93 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~~----------~a 93 (340)
+.+++.|+||+|.+|..++..|+..|. +|++.+.++. .....++.......++.... +-.|+. +.
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~ 90 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA--EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE 90 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 456899999999999999999998886 8999988752 22233343211111222221 112211 11
Q ss_pred cCCCCEEEEcCCCCCCC--CC---CHHHHHHHHHH----HHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHHHHhCC
Q 019519 94 LEDSDVVIIPAGVPRKP--GM---TRDDLFNINAG----IVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGT 164 (340)
Q Consensus 94 l~~aDiVi~~ag~~~~~--g~---~r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~sg~ 164 (340)
....|++|+.||....+ .. .-...+..|.. +.+.+.+.+++. .+.|++++.-......+-..-......
T Consensus 91 ~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vsS~~~~~~~~~~~~~~~~~~ 168 (313)
T PRK05854 91 GRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIAARRGAINWDDLNWERS 168 (313)
T ss_pred CCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEechhhcCCCcCccccccccc
Confidence 24589999999863221 11 12233444443 355555555432 355665554322110000000000000
Q ss_pred CCCCceEeccchhHHHHHHHHHHHcCCCCCCCceeEE
Q 019519 165 YNEKKLFGVTTLDVVRAKTFYAGKANVNVAEVNVPVV 201 (340)
Q Consensus 165 ~~~~kviG~~~ld~~R~~~~la~~l~v~~~~v~~~v~ 201 (340)
+++...++.+.+....+-..+++.+......|.+..+
T Consensus 169 ~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v 205 (313)
T PRK05854 169 YAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLA 205 (313)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEE
Confidence 2333445554444444556666655443444554444
No 281
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=96.36 E-value=0.012 Score=48.68 Aligned_cols=35 Identities=26% Similarity=0.524 Sum_probs=30.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
..||+|+|+ |.+|+.++..|+..|. .++.|+|.+.
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv-~~i~lvD~d~ 36 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGV-GKITLVDDDI 36 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTT-SEEEEEESSB
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCC-CceeecCCcc
Confidence 359999998 9999999999998875 6999999864
No 282
>PRK06128 oxidoreductase; Provisional
Probab=96.36 E-value=0.081 Score=49.57 Aligned_cols=116 Identities=22% Similarity=0.232 Sum_probs=68.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc----HHHHHHHhcCCCCceEEEEe-cCCc---ccc-------
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT----PGVAADVGHINTRSEVAGYM-GNDQ---LGQ------- 92 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~----~~~~~dl~~~~~~~~v~~~~-~~~d---~~~------- 92 (340)
.++|.|+||+|.+|.+++..|+..|. +|++.+.+.. ......+.... .++.... +-+| .++
T Consensus 55 ~k~vlITGas~gIG~~~a~~l~~~G~--~V~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~ 130 (300)
T PRK06128 55 GRKALITGADSGIGRATAIAFAREGA--DIALNYLPEEEQDAAEVVQLIQAEG--RKAVALPGDLKDEAFCRQLVERAVK 130 (300)
T ss_pred CCEEEEecCCCcHHHHHHHHHHHcCC--EEEEEeCCcchHHHHHHHHHHHHcC--CeEEEEecCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999998887 7888765431 12222233221 1222211 1112 111
Q ss_pred ccCCCCEEEEcCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecCC
Q 019519 93 ALEDSDVVIIPAGVPR--KP--GMT---RDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNP 147 (340)
Q Consensus 93 al~~aDiVi~~ag~~~--~~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP 147 (340)
.+...|++|+.+|... .+ ..+ -...+..|+.-...+++.+..+- +.+.+|+++.-
T Consensus 131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~ 193 (300)
T PRK06128 131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSI 193 (300)
T ss_pred HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCc
Confidence 2346899999998642 21 122 23456678777777777776553 34567766543
No 283
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.36 E-value=0.025 Score=49.24 Aligned_cols=105 Identities=15% Similarity=0.148 Sum_probs=61.2
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPR 108 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~~~ 108 (340)
|||+||||+|.+|+.++.....+|+ |++-+=.+..+-.+. ..... -+-..+ +.+.+.+++.+-|+||.+-|.+.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGH--eVTAivRn~~K~~~~--~~~~i-~q~Dif-d~~~~a~~l~g~DaVIsA~~~~~ 74 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGH--EVTAIVRNASKLAAR--QGVTI-LQKDIF-DLTSLASDLAGHDAVISAFGAGA 74 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCC--eeEEEEeChHhcccc--cccee-eccccc-ChhhhHhhhcCCceEEEeccCCC
Confidence 7999999999999999999999998 888887665221110 10000 001111 11223467899999999876543
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecC
Q 019519 109 KPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 109 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN 146 (340)
++. . ..-.+-...+...++.. -...++++.-
T Consensus 75 -~~~--~---~~~~k~~~~li~~l~~a-gv~RllVVGG 105 (211)
T COG2910 75 -SDN--D---ELHSKSIEALIEALKGA-GVPRLLVVGG 105 (211)
T ss_pred -CCh--h---HHHHHHHHHHHHHHhhc-CCeeEEEEcC
Confidence 121 1 11122244455555543 3456666643
No 284
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.35 E-value=0.082 Score=47.82 Aligned_cols=34 Identities=26% Similarity=0.328 Sum_probs=30.1
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
++|.|+||+|++|++++..|+..+. +++++|...
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~--~vi~~~r~~ 36 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF--DLAINDRPD 36 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecCc
Confidence 4789999999999999999998887 899999754
No 285
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.35 E-value=0.046 Score=52.03 Aligned_cols=116 Identities=17% Similarity=0.247 Sum_probs=65.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe--cCCcc-------ccccC-
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM--GNDQL-------GQALE- 95 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~--~~~d~-------~~al~- 95 (340)
...+.|+||+|.+|.+++..|+..|. +|+++|.++ .+....++.......++.... -++|. .+.+.
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGL--NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 35899999999999999999999887 899999876 233344444321111222111 01111 12223
Q ss_pred -CCCEEEEcCCCCCC---C--CCCH---HHHHHHHHHHHHHHH----HHHHHhCCCcEEEEecC
Q 019519 96 -DSDVVIIPAGVPRK---P--GMTR---DDLFNINAGIVKDLC----SAIAKYCPNAIVNMISN 146 (340)
Q Consensus 96 -~aDiVi~~ag~~~~---~--g~~r---~~~~~~N~~i~~~i~----~~i~~~~p~a~viv~tN 146 (340)
|.|++|..||.... + ..+. ...+..|......+. +.+.+. ..+.++++|.
T Consensus 131 ~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~g~IV~iSS 193 (320)
T PLN02780 131 LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIINIGS 193 (320)
T ss_pred CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCcEEEEEec
Confidence 45699999986421 1 2222 234555665444444 444433 3456666654
No 286
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.34 E-value=0.081 Score=48.03 Aligned_cols=117 Identities=13% Similarity=0.160 Sum_probs=65.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcce-EEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCcc---ccc------
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSR-LALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQL---GQA------ 93 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~e-l~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~---~~a------ 93 (340)
+.++|.|+||+|.+|+.++..|...+. + |+++|.+.. .....++.... .++.... +-+|. .+.
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~--~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGA--AGLVICGRNAEKGEAQAAELEALG--AKAVFVQADLSDVEDCRRVVAAADE 80 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC--CeEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHH
Confidence 446899999999999999999988876 6 999998652 22222332211 1222211 11221 111
Q ss_pred -cCCCCEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHH----HHHHHHhCCCcEEEEecCC
Q 019519 94 -LEDSDVVIIPAGVPRKP---GMTRD---DLFNINAGIVKDL----CSAIAKYCPNAIVNMISNP 147 (340)
Q Consensus 94 -l~~aDiVi~~ag~~~~~---g~~r~---~~~~~N~~i~~~i----~~~i~~~~p~a~viv~tNP 147 (340)
+.+.|+||+++|..... ..+.. ..+..|..-...+ .+.+.+....+.++++|.-
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~ 145 (260)
T PRK06198 81 AFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSM 145 (260)
T ss_pred HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCc
Confidence 23689999999865322 12222 2345555444444 4444443334566666543
No 287
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.34 E-value=0.019 Score=48.23 Aligned_cols=72 Identities=22% Similarity=0.356 Sum_probs=48.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
.++|+|+|+ |.+|..++..|...+ ..++.++|.+.. ...+.++.... ..... .+..+.++++|+||.+..
T Consensus 19 ~~~i~iiG~-G~~g~~~a~~l~~~g-~~~v~v~~r~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~Dvvi~~~~ 90 (155)
T cd01065 19 GKKVLILGA-GGAARAVAYALAELG-AAKIVIVNRTLEKAKALAERFGELG--IAIAY----LDLEELLAEADLIINTTP 90 (155)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHhhcc--cceee----cchhhccccCCEEEeCcC
Confidence 469999998 999999999998776 458999998752 22232332110 01111 244566899999999865
Q ss_pred CC
Q 019519 106 VP 107 (340)
Q Consensus 106 ~~ 107 (340)
.+
T Consensus 91 ~~ 92 (155)
T cd01065 91 VG 92 (155)
T ss_pred CC
Confidence 43
No 288
>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]
Probab=96.31 E-value=0.016 Score=55.04 Aligned_cols=119 Identities=21% Similarity=0.300 Sum_probs=69.5
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc-HHHHH---HHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT-PGVAA---DVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~-~~~~~---dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
|||+|+|+ |.||+.+++.|.+.+. .+.++-..+. +.... .+.+........... .++ .+.+..+|+||++.
T Consensus 1 mkI~IlGa-GAvG~l~g~~L~~~g~--~V~~~~R~~~~~~l~~~GL~i~~~~~~~~~~~~~-~~~-~~~~~~~Dlviv~v 75 (307)
T COG1893 1 MKILILGA-GAIGSLLGARLAKAGH--DVTLLVRSRRLEALKKKGLRIEDEGGNFTTPVVA-ATD-AEALGPADLVIVTV 75 (307)
T ss_pred CeEEEECC-cHHHHHHHHHHHhCCC--eEEEEecHHHHHHHHhCCeEEecCCCcccccccc-ccC-hhhcCCCCEEEEEe
Confidence 69999998 9999999999999883 5666654331 11111 011111100111111 122 46678999999985
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceE-eccc
Q 019519 105 GVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLF-GVTT 175 (340)
Q Consensus 105 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kvi-G~~~ 175 (340)
- .--..+..+.+..+. |+++|+..-|=.+..-.+ +.. ++.++++ |+|.
T Consensus 76 K----------------a~q~~~al~~l~~~~~~~t~vl~lqNG~g~~e~l-----~~~--~~~~~il~G~~~ 125 (307)
T COG1893 76 K----------------AYQLEEALPSLAPLLGPNTVVLFLQNGLGHEEEL-----RKI--LPKETVLGGVTT 125 (307)
T ss_pred c----------------cccHHHHHHHhhhcCCCCcEEEEEeCCCcHHHHH-----HHh--CCcceEEEEEee
Confidence 2 122345556666665 677888888888766522 222 5555554 6764
No 289
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=96.31 E-value=0.065 Score=48.71 Aligned_cols=117 Identities=17% Similarity=0.209 Sum_probs=66.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEe-cCCc---ccccc-------C
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-GNDQ---LGQAL-------E 95 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------~ 95 (340)
+...+.|+|++|.+|.+++..|+..|. +|+++|..+......++.... .++.... +-+| ..+.+ .
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC--DIVGINIVEPTETIEQVTALG--RRFLSLTADLRKIDGIPALLERAVAEFG 84 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEecCcchHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 345899999999999999999998887 888888765322223333211 1222211 1112 12222 3
Q ss_pred CCCEEEEcCCCCCCC---CCC---HHHHHHHHHHHHH----HHHHHHHHhCCCcEEEEecCC
Q 019519 96 DSDVVIIPAGVPRKP---GMT---RDDLFNINAGIVK----DLCSAIAKYCPNAIVNMISNP 147 (340)
Q Consensus 96 ~aDiVi~~ag~~~~~---g~~---r~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tNP 147 (340)
..|++|+.+|..... +.+ -...+..|..... .+.+.+.+..+.+.++++|.-
T Consensus 85 ~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~ 146 (253)
T PRK08993 85 HIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASM 146 (253)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECch
Confidence 689999999874311 122 2234455655444 444444443445777766543
No 290
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=96.31 E-value=0.038 Score=49.57 Aligned_cols=35 Identities=31% Similarity=0.562 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIA 63 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~ 63 (340)
+..||+|+|+ |.+|+.++..|+..|. .++.|+|.+
T Consensus 27 ~~~~V~ViG~-GglGs~ia~~La~~Gv-g~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGA-GGLGSNIAVALARSGV-GNLKLVDFD 61 (212)
T ss_pred hCCCEEEECc-CHHHHHHHHHHHHcCC-CeEEEEeCC
Confidence 3569999998 9999999999998886 589999987
No 291
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.30 E-value=0.068 Score=48.54 Aligned_cols=114 Identities=16% Similarity=0.233 Sum_probs=63.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEe-cCCccccc-------cCCCCE
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-GNDQLGQA-------LEDSDV 99 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~~~d~~~a-------l~~aDi 99 (340)
.+++.|+||+|.+|..++..|+..+. ++++.+.+.. ....++.+... ..+.... ...+..++ +...|+
T Consensus 7 ~k~~lItGas~gIG~~~a~~l~~~G~--~v~~~~~~~~-~~~~~l~~~~~-~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 7 GKVALITGGTRGIGRAIAEAFLREGA--KVAVLYNSAE-NEAKELREKGV-FTIKCDVGNRDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCcH-HHHHHHHhCCC-eEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46899999999999999999998887 7887765431 11222322111 0111110 11111122 236799
Q ss_pred EEEcCCCCCC-C--CCCHH---HHHHHHHHH----HHHHHHHHHHhCCCcEEEEecC
Q 019519 100 VIIPAGVPRK-P--GMTRD---DLFNINAGI----VKDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 100 Vi~~ag~~~~-~--g~~r~---~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN 146 (340)
||+.+|.... + ..+.. ..+..|+.- .+.+.+.+++. ..+.+|++|.
T Consensus 83 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~isS 138 (255)
T PRK06463 83 LVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS-KNGAIVNIAS 138 (255)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcC
Confidence 9999987432 1 22222 234445544 56666666543 3456666654
No 292
>PRK12742 oxidoreductase; Provisional
Probab=96.29 E-value=0.051 Score=48.54 Aligned_cols=155 Identities=15% Similarity=0.167 Sum_probs=78.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHh-cCCCCceEEEEecCCcc---ccc---cCCCCEE
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVG-HINTRSEVAGYMGNDQL---GQA---LEDSDVV 100 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~-~~~~~~~v~~~~~~~d~---~~a---l~~aDiV 100 (340)
.++|.|+||+|.+|+.++..|+..+. ++++.+..... ...++. +... ..+.. +.+|. .+. +...|++
T Consensus 6 ~k~vlItGasggIG~~~a~~l~~~G~--~v~~~~~~~~~-~~~~l~~~~~~-~~~~~--D~~~~~~~~~~~~~~~~id~l 79 (237)
T PRK12742 6 GKKVLVLGGSRGIGAAIVRRFVTDGA--NVRFTYAGSKD-AAERLAQETGA-TAVQT--DSADRDAVIDVVRKSGALDIL 79 (237)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEecCCCHH-HHHHHHHHhCC-eEEec--CCCCHHHHHHHHHHhCCCcEE
Confidence 46899999999999999999998887 78777654311 111121 1111 01111 11221 122 2457999
Q ss_pred EEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec
Q 019519 101 IIPAGVPRKP---GMTR---DDLFNINAGIVKDLCSAIAKY-CPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV 173 (340)
Q Consensus 101 i~~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~ 173 (340)
|+.+|..... ..+. ...+..|..-...++..+.++ .+.+.+|+++.-... ..+ .+....++.
T Consensus 80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~----------~~~-~~~~~~Y~~ 148 (237)
T PRK12742 80 VVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGD----------RMP-VAGMAAYAA 148 (237)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccc----------cCC-CCCCcchHH
Confidence 9999864321 1221 233455655444444333332 234566666543210 011 333445555
Q ss_pred cchhHHHHHHHHHHHcCCCCCCCceeEE
Q 019519 174 TTLDVVRAKTFYAGKANVNVAEVNVPVV 201 (340)
Q Consensus 174 ~~ld~~R~~~~la~~l~v~~~~v~~~v~ 201 (340)
+......+-..+++.++ +..|++..+
T Consensus 149 sKaa~~~~~~~la~~~~--~~gi~v~~v 174 (237)
T PRK12742 149 SKSALQGMARGLARDFG--PRGITINVV 174 (237)
T ss_pred hHHHHHHHHHHHHHHHh--hhCeEEEEE
Confidence 43333345556666653 344554443
No 293
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.29 E-value=0.042 Score=49.59 Aligned_cols=33 Identities=21% Similarity=0.304 Sum_probs=28.4
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIA 63 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~ 63 (340)
++|.|+||+|.+|++++..|+..+. ++++.+.+
T Consensus 6 k~ilItGas~gIG~~la~~l~~~G~--~vv~~~~~ 38 (253)
T PRK08642 6 QTVLVTGGSRGLGAAIARAFAREGA--RVVVNYHQ 38 (253)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCC--eEEEEcCC
Confidence 5899999999999999999998887 78776643
No 294
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.037 Score=50.93 Aligned_cols=34 Identities=24% Similarity=0.237 Sum_probs=30.3
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
+++.|+||+|.+|..++..|+..|. +|++.+.++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~ 35 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY--EVWATARKA 35 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 4799999999999999999998887 899998765
No 295
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.28 E-value=0.046 Score=48.99 Aligned_cols=115 Identities=20% Similarity=0.293 Sum_probs=63.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEE-eCCCc--HHHHHHHhcCCCCceEEEEe-cCCcc---cccc------
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALY-DIANT--PGVAADVGHINTRSEVAGYM-GNDQL---GQAL------ 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~-D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~---~~al------ 94 (340)
+++|.|+||+|.+|+.++..|+..+. ++++. +.+.. ......+.... .++.... +-+|. .+.+
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~--~v~~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA--KVVIAYDINEEAAQELLEEIKEEG--GDAIAVKADVSSEEDVENLVEQIVEK 80 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45899999999999999999988886 77777 87652 22222232211 1232221 11121 1222
Q ss_pred -CCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHhC---CCcEEEEecC
Q 019519 95 -EDSDVVIIPAGVPRKP---GMTR---DDLFNINAGIVKDLCSAIAKYC---PNAIVNMISN 146 (340)
Q Consensus 95 -~~aDiVi~~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tN 146 (340)
...|+||+.+|..... ..+. ...+..|..-...+.+.+..+. ....+++++.
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS 142 (247)
T PRK05565 81 FGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISS 142 (247)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECC
Confidence 2789999998864211 1122 2345566665545554444322 1234555554
No 296
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=96.28 E-value=0.082 Score=49.47 Aligned_cols=67 Identities=27% Similarity=0.408 Sum_probs=42.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHH---HHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG---VAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~---~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
+++|+|+|. |.+|..++..|...++ .+.+++.+...+ .+.++.=. . ... .....++.++||+||++.
T Consensus 3 ~~~v~IvG~-GliG~s~a~~l~~~g~--~v~i~g~d~~~~~~~~a~~lgv~--d-~~~----~~~~~~~~~~aD~Vivav 72 (279)
T COG0287 3 SMKVGIVGL-GLMGGSLARALKEAGL--VVRIIGRDRSAATLKAALELGVI--D-ELT----VAGLAEAAAEADLVIVAV 72 (279)
T ss_pred CcEEEEECC-chHHHHHHHHHHHcCC--eEEEEeecCcHHHHHHHhhcCcc--c-ccc----cchhhhhcccCCEEEEec
Confidence 579999997 9999999999999998 555666654221 11111100 0 110 011146778999999984
No 297
>PLN02712 arogenate dehydrogenase
Probab=96.28 E-value=0.031 Score=58.61 Aligned_cols=66 Identities=21% Similarity=0.296 Sum_probs=45.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccC-CCCEEEEcC
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALE-DSDVVIIPA 104 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~-~aDiVi~~a 104 (340)
.+++||+|||. |.+|.+++..|...+. +|+.+|.+.....+.++ . +... +++++.+. ++|+||++.
T Consensus 367 ~~~~kIgIIGl-G~mG~slA~~L~~~G~--~V~~~dr~~~~~~a~~~---G----v~~~---~~~~el~~~~aDvVILav 433 (667)
T PLN02712 367 GSKLKIAIVGF-GNFGQFLAKTMVKQGH--TVLAYSRSDYSDEAQKL---G----VSYF---SDADDLCEEHPEVILLCT 433 (667)
T ss_pred CCCCEEEEEec-CHHHHHHHHHHHHCcC--EEEEEECChHHHHHHHc---C----CeEe---CCHHHHHhcCCCEEEECC
Confidence 45689999997 9999999999988776 89999987422122211 1 1222 34445554 599999985
No 298
>PRK09242 tropinone reductase; Provisional
Probab=96.28 E-value=0.073 Score=48.35 Aligned_cols=117 Identities=14% Similarity=0.145 Sum_probs=65.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCCc----------ccccc
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GNDQ----------LGQAL 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~d----------~~~al 94 (340)
.+++.|+||+|.+|..++..|+..+. +|++.+.+. ......++.......++.... +-.| ..+.+
T Consensus 9 ~k~~lItGa~~gIG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (257)
T PRK09242 9 GQTALITGASKGIGLAIAREFLGLGA--DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW 86 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999998887 899999875 223333443321112232221 1111 11224
Q ss_pred CCCCEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHH----HHHHHHhCCCcEEEEecCC
Q 019519 95 EDSDVVIIPAGVPRK-P--GMTR---DDLFNINAGIVKDL----CSAIAKYCPNAIVNMISNP 147 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~-~--g~~r---~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~tNP 147 (340)
...|+||+.+|.... + ..+. ...+..|..-...+ .+.+++. +.+.++++|.-
T Consensus 87 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS~ 148 (257)
T PRK09242 87 DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH-ASSAIVNIGSV 148 (257)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCceEEEECcc
Confidence 567999999986321 1 1222 22344555544444 4444433 34566666543
No 299
>PLN02503 fatty acyl-CoA reductase 2
Probab=96.27 E-value=0.056 Score=55.94 Aligned_cols=110 Identities=19% Similarity=0.123 Sum_probs=69.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCC-CcceEEEEeCCC----c-HHHHHHHhcC----------C------CCceEEE
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNP-LVSRLALYDIAN----T-PGVAADVGHI----------N------TRSEVAG 83 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~-~~~el~L~D~~~----~-~~~~~dl~~~----------~------~~~~v~~ 83 (340)
.+.+.|.|+||+||+|..++..|+... -+.+|.++.... + +....++.+. . ...++..
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~ 196 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP 196 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence 346899999999999999999888654 456888886643 1 1111111110 0 0123443
Q ss_pred EecC-C---------ccccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Q 019519 84 YMGN-D---------QLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC 136 (340)
Q Consensus 84 ~~~~-~---------d~~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~ 136 (340)
..+. + +++...++.|+||++|+.-. .+.........|+...+++.+.+.+..
T Consensus 197 v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~-f~~~~~~a~~vNV~GT~nLLelA~~~~ 258 (605)
T PLN02503 197 VVGNVCESNLGLEPDLADEIAKEVDVIINSAANTT-FDERYDVAIDINTRGPCHLMSFAKKCK 258 (605)
T ss_pred EEeeCCCcccCCCHHHHHHHHhcCCEEEECccccc-cccCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3211 1 12223367999999987542 334556677889999999999887653
No 300
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.27 E-value=0.022 Score=54.63 Aligned_cols=92 Identities=21% Similarity=0.293 Sum_probs=58.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~ 106 (340)
..++|+|||. |.+|+.++..+...+. +|..||......... .. . +.. .++.+.+++||+|++..
T Consensus 149 ~gktvgIiG~-G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~~~--~~-~----~~~----~~l~ell~~aDiV~l~l-- 212 (333)
T PRK13243 149 YGKTIGIIGF-GRIGQAVARRAKGFGM--RILYYSRTRKPEAEK--EL-G----AEY----RPLEELLRESDFVSLHV-- 212 (333)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCCCChhhHH--Hc-C----CEe----cCHHHHHhhCCEEEEeC--
Confidence 4579999998 9999999999887776 899999764221111 11 1 111 24678899999999985
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 107 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
|..+ .+..++-. +.+....|++++|+++
T Consensus 213 P~t~---------~T~~~i~~--~~~~~mk~ga~lIN~a 240 (333)
T PRK13243 213 PLTK---------ETYHMINE--ERLKLMKPTAILVNTA 240 (333)
T ss_pred CCCh---------HHhhccCH--HHHhcCCCCeEEEECc
Confidence 2111 11222211 2333345788998885
No 301
>PRK08226 short chain dehydrogenase; Provisional
Probab=96.27 E-value=0.094 Score=47.73 Aligned_cols=115 Identities=23% Similarity=0.275 Sum_probs=64.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc-HHHHHHHhcCCCCceEEEEe-cCCc---cccc-------cC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT-PGVAADVGHINTRSEVAGYM-GNDQ---LGQA-------LE 95 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l~ 95 (340)
..++.|+||+|.+|+.++..|+..+. +|++++.++. .....++.... .++.... +-+| +.+. +.
T Consensus 6 ~~~~lItG~s~giG~~la~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 81 (263)
T PRK08226 6 GKTALITGALQGIGEGIARVFARHGA--NLILLDISPEIEKLADELCGRG--HRCTAVVADVRDPASVAAAIKRAKEKEG 81 (263)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhC--CceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999998887 8999997652 22222222111 1222211 1122 1122 23
Q ss_pred CCCEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEecC
Q 019519 96 DSDVVIIPAGVPRK-P--GMT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (340)
Q Consensus 96 ~aDiVi~~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 146 (340)
..|+||+.+|.... + ..+ ....+..|+.....+.+.+..+ ...+.+++++.
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS 141 (263)
T PRK08226 82 RIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSS 141 (263)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECc
Confidence 56999999986321 1 111 2234556666555555554432 23345665544
No 302
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.26 E-value=0.034 Score=50.85 Aligned_cols=35 Identities=26% Similarity=0.367 Sum_probs=31.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
.+++.|+||+|.+|++++..|+..|. +|+++|.++
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~ 39 (262)
T TIGR03325 5 GEVVLVTGGASGLGRAIVDRFVAEGA--RVAVLDKSA 39 (262)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 46999999999999999999999887 899999765
No 303
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=96.26 E-value=0.2 Score=45.74 Aligned_cols=117 Identities=18% Similarity=0.254 Sum_probs=65.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCCcc---cc-------c
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GNDQL---GQ-------A 93 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~d~---~~-------a 93 (340)
+..++.|+||+|.+|.+++..|+..+. ++++.|.++ ......++.... .++.... +-+|. ++ .
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA--TIVFNDINQELVDKGLAAYRELG--IEAHGYVCDVTDEDGVQAMVSQIEKE 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 345899999999999999999998887 899998765 222233333221 1222211 11221 11 1
Q ss_pred cCCCCEEEEcCCCCCC-C--CCCH---HHHHHHHHHH----HHHHHHHHHHhCCCcEEEEecCCC
Q 019519 94 LEDSDVVIIPAGVPRK-P--GMTR---DDLFNINAGI----VKDLCSAIAKYCPNAIVNMISNPV 148 (340)
Q Consensus 94 l~~aDiVi~~ag~~~~-~--g~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNP~ 148 (340)
+...|++|+.+|.... + ..+. ...+..|..- .+.+.+.+.+ ...+.|++++...
T Consensus 85 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~isS~~ 148 (265)
T PRK07097 85 VGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIK-KGHGKIINICSMM 148 (265)
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh-cCCcEEEEEcCcc
Confidence 2457999999986321 1 1121 2233445443 3344444443 3456677776644
No 304
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=96.25 E-value=0.12 Score=47.07 Aligned_cols=117 Identities=15% Similarity=0.197 Sum_probs=65.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC---cHHHHHHHhcCCCCceEEEEe-cCCccc---cc-----
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN---TPGVAADVGHINTRSEVAGYM-GNDQLG---QA----- 93 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~~~d~~---~a----- 93 (340)
++..++.|+||+|.+|..++..|+..+. .+++.+.++ ......++.... .++.... +-+|.+ +.
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~--~vvi~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~i~~~~~~~~ 80 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKA--KVVINYRSDEEEANDVAEEIKKAG--GEAIAVKGDVTVESDVVNLIQTAV 80 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHHH
Confidence 3456999999999999999999998886 777776643 122233343221 1222111 112221 11
Q ss_pred --cCCCCEEEEcCCCCCCC---CCCHH---HHHHHHHH----HHHHHHHHHHHhCCCcEEEEecC
Q 019519 94 --LEDSDVVIIPAGVPRKP---GMTRD---DLFNINAG----IVKDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 94 --l~~aDiVi~~ag~~~~~---g~~r~---~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN 146 (340)
+...|++|+.+|.+... ..+.. ..+..|+. ..+.+.+.+.+....+.++++|.
T Consensus 81 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS 145 (261)
T PRK08936 81 KEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSS 145 (261)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Confidence 23579999999864321 12222 23455643 33455556665555566666654
No 305
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.25 E-value=0.15 Score=46.51 Aligned_cols=117 Identities=15% Similarity=0.146 Sum_probs=66.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCCccc----------ccc
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GNDQLG----------QAL 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~d~~----------~al 94 (340)
...+.|+||+|.+|..++..|+..+. +|++.+.++ ......++.......++.... +-+|.+ +.+
T Consensus 8 ~k~~lItGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T PRK07062 8 GRVAVVTGGSSGIGLATVELLLEAGA--SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF 85 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 45899999999999999999998887 899999875 222233333221111232221 112221 123
Q ss_pred CCCCEEEEcCCCCCCC---CCCHH---HHHHHH----HHHHHHHHHHHHHhCCCcEEEEecCC
Q 019519 95 EDSDVVIIPAGVPRKP---GMTRD---DLFNIN----AGIVKDLCSAIAKYCPNAIVNMISNP 147 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~---g~~r~---~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tNP 147 (340)
...|++|+.+|..... ..+.. ..+..| ....+.+.+.+++. ..+.|+++|.-
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~ 147 (265)
T PRK07062 86 GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS-AAASIVCVNSL 147 (265)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-CCcEEEEeccc
Confidence 4579999999864321 11211 222333 33455666666543 34566666543
No 306
>PRK08818 prephenate dehydrogenase; Provisional
Probab=96.23 E-value=0.027 Score=54.75 Aligned_cols=56 Identities=27% Similarity=0.377 Sum_probs=41.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
.++|+|||.+|.+|.+++..|... ...+|.-+|..+ . ...+..+.+++||+||++.
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~~-~~~~V~g~D~~d---------------~-----~~~~~~~~v~~aDlVilav 59 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRTR-MQLEVIGHDPAD---------------P-----GSLDPATLLQRADVLIFSA 59 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhc-CCCEEEEEcCCc---------------c-----ccCCHHHHhcCCCEEEEeC
Confidence 369999997799999999999865 233888898631 0 0123457789999999984
No 307
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.23 Score=47.51 Aligned_cols=115 Identities=14% Similarity=0.131 Sum_probs=65.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCCc---cccc-------
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GNDQ---LGQA------- 93 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~d---~~~a------- 93 (340)
+..+|.|+||+|.+|..++..|+..|. +|++++.++ .+....++..... ++.... +-+| .+++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~--~Vvl~~R~~~~l~~~~~~l~~~g~--~~~~v~~Dv~d~~~v~~~~~~~~~~ 82 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA--KVVLLARGEEGLEALAAEIRAAGG--EALAVVADVADAEAVQAAADRAEEE 82 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHcCC--cEEEEEecCCCHHHHHHHHHHHHHH
Confidence 345899999999999999999998887 899999875 2233333432221 222111 1122 2222
Q ss_pred cCCCCEEEEcCCCCCCC---CCCHH---HHHHHH----HHHHHHHHHHHHHhCCCcEEEEecC
Q 019519 94 LEDSDVVIIPAGVPRKP---GMTRD---DLFNIN----AGIVKDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 94 l~~aDiVi~~ag~~~~~---g~~r~---~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tN 146 (340)
+...|++|+.+|..... ..+.. ..+..| +...+.+.+.+.+. ..+.+|+++.
T Consensus 83 ~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~-~~g~iV~isS 144 (334)
T PRK07109 83 LGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR-DRGAIIQVGS 144 (334)
T ss_pred CCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEeCC
Confidence 23689999999863211 12221 223333 44555666666544 2456666654
No 308
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.23 E-value=0.24 Score=45.57 Aligned_cols=76 Identities=21% Similarity=0.271 Sum_probs=48.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCCc---cccc-------
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GNDQ---LGQA------- 93 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~d---~~~a------- 93 (340)
+.+++.|+||+|.+|++++..|+..+. +|+++|.++ .+....++.+.. .++.... +-.| ....
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA--KVAILDRNQEKAEAVVAEIKAAG--GEALAVKADVLDKESLEQARQQILED 84 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 346899999999999999999998887 899999875 222333343221 1222221 1112 1111
Q ss_pred cCCCCEEEEcCCC
Q 019519 94 LEDSDVVIIPAGV 106 (340)
Q Consensus 94 l~~aDiVi~~ag~ 106 (340)
+...|++|+.+|.
T Consensus 85 ~g~id~li~~ag~ 97 (278)
T PRK08277 85 FGPCDILINGAGG 97 (278)
T ss_pred cCCCCEEEECCCC
Confidence 2478999999885
No 309
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.47 Score=43.19 Aligned_cols=37 Identities=32% Similarity=0.385 Sum_probs=31.0
Q ss_pred CCCCeEEEEcCCC-ChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 26 VPDRKVAVLGAAG-GIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 26 ~~~~KI~IiGaaG-~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
++.+++.|+||+| .+|..++..|+..|. +|++.|.+.
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~--~V~~~~~~~ 52 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGA--RVVISDIHE 52 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCC--EEEEEeCCH
Confidence 3456899999877 599999999998887 799998765
No 310
>PRK06196 oxidoreductase; Provisional
Probab=96.22 E-value=0.041 Score=51.96 Aligned_cols=112 Identities=20% Similarity=0.154 Sum_probs=65.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEecCCcc---cc-------cc
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYMGNDQL---GQ-------AL 94 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~~~d~---~~-------al 94 (340)
+.++|.|+||+|.+|.+++..|+..+. +|++.+.+.. .....++.... -+.. +-+|. ++ .+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~--~Vv~~~R~~~~~~~~~~~l~~v~---~~~~--Dl~d~~~v~~~~~~~~~~~ 97 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA--HVIVPARRPDVAREALAGIDGVE---VVML--DLADLESVRAFAERFLDSG 97 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhhCe---EEEc--cCCCHHHHHHHHHHHHhcC
Confidence 346899999999999999999999887 8999998752 22222232111 1111 11121 11 12
Q ss_pred CCCCEEEEcCCCCCCCC----CCHHHHHHHHHH----HHHHHHHHHHHhCCCcEEEEecC
Q 019519 95 EDSDVVIIPAGVPRKPG----MTRDDLFNINAG----IVKDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~g----~~r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN 146 (340)
.+.|++|+.||....+. ......+..|.. +.+.+.+.+.+.. .+.||++|.
T Consensus 98 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS 156 (315)
T PRK06196 98 RRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSS 156 (315)
T ss_pred CCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECC
Confidence 46899999998642221 112333445544 4566666665442 456666654
No 311
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.21 E-value=0.11 Score=46.74 Aligned_cols=115 Identities=17% Similarity=0.215 Sum_probs=61.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEE-eCCCc--HHHHHHHhcCCCCceEEEEe-cCCc---ccccc------
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALY-DIANT--PGVAADVGHINTRSEVAGYM-GNDQ---LGQAL------ 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~-D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al------ 94 (340)
.+++.|+||+|.+|+.++..|+..+. ++++. +.+.. +....++.... .++.... +-+| +..++
T Consensus 4 ~~~vlItGa~g~iG~~~a~~l~~~g~--~v~~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (250)
T PRK08063 4 GKVALVTGSSRGIGKAIALRLAEEGY--DIAVNYARSRKAAEETAEEIEALG--RKALAVKANVGDVEKIKEMFAQIDEE 79 (250)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35899999999999999999998886 76664 43332 22223333222 1222221 1112 11222
Q ss_pred -CCCCEEEEcCCCCC-CC--CCCHH---HHHHHHHHHHHHHHHHHHHh---CCCcEEEEecC
Q 019519 95 -EDSDVVIIPAGVPR-KP--GMTRD---DLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (340)
Q Consensus 95 -~~aDiVi~~ag~~~-~~--g~~r~---~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 146 (340)
...|+||+.+|... .+ ..+.. ..+..|......+++.+.++ .+.+.++++|.
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS 141 (250)
T PRK08063 80 FGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSS 141 (250)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 35899999987532 11 11222 12345555555555555443 23456666654
No 312
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=96.20 E-value=0.047 Score=45.43 Aligned_cols=33 Identities=27% Similarity=0.600 Sum_probs=29.5
Q ss_pred eEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 30 KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
||+|+|+ |.+|+.++..|+..|. .++.|+|.+.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv-~~i~ivD~d~ 33 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGV-GKITLIDFDT 33 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCC-CEEEEEcCCC
Confidence 6899998 9999999999998886 6899999873
No 313
>PLN02928 oxidoreductase family protein
Probab=96.20 E-value=0.022 Score=54.94 Aligned_cols=106 Identities=19% Similarity=0.188 Sum_probs=61.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHh--cCCCCceEEEEecCCccccccCCCCEEEEc
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVG--HINTRSEVAGYMGNDQLGQALEDSDVVIIP 103 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~--~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ 103 (340)
...++|+|+|. |.+|+.++..+..-|. +|..+|..........+. ...............++++.++.||+|++.
T Consensus 157 l~gktvGIiG~-G~IG~~vA~~l~afG~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~ 233 (347)
T PLN02928 157 LFGKTVFILGY-GAIGIELAKRLRPFGV--KLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC 233 (347)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHhhCCC--EEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence 34579999998 9999999999886665 999999753211111110 000000000000124678899999999997
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCC
Q 019519 104 AGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNP 147 (340)
Q Consensus 104 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP 147 (340)
. |..+ .|-.++- .+.+....|.+++||++=-
T Consensus 234 l--Plt~---------~T~~li~--~~~l~~Mk~ga~lINvaRG 264 (347)
T PLN02928 234 C--TLTK---------ETAGIVN--DEFLSSMKKGALLVNIARG 264 (347)
T ss_pred C--CCCh---------HhhcccC--HHHHhcCCCCeEEEECCCc
Confidence 5 2211 1111221 2444445678999988643
No 314
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.19 E-value=0.014 Score=52.46 Aligned_cols=95 Identities=16% Similarity=0.117 Sum_probs=59.7
Q ss_pred EEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEe-cCCccccccCCCCEEEEcCCCCCC
Q 019519 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-GNDQLGQALEDSDVVIIPAGVPRK 109 (340)
Q Consensus 31 I~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~~~d~~~al~~aDiVi~~ag~~~~ 109 (340)
|+|+||+|++|++++..|...++ +|..+=.+........|.+... .-+.... ....+.++|+|+|.|+++.+...
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~--~V~~l~R~~~~~~~~~l~~~g~-~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~- 76 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF--SVRALVRDPSSDRAQQLQALGA-EVVEADYDDPESLVAALKGVDAVFSVTPPSH- 76 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG--CEEEEESSSHHHHHHHHHHTTT-EEEES-TT-HHHHHHHHTTCSEEEEESSCSC-
T ss_pred CEEECCccHHHHHHHHHHHhCCC--CcEEEEeccchhhhhhhhcccc-eEeecccCCHHHHHHHHcCCceEEeecCcch-
Confidence 78999999999999999998766 7777766653334444554432 1122111 11345678999999999865432
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhCCC
Q 019519 110 PGMTRDDLFNINAGIVKDLCSAIAKYCPN 138 (340)
Q Consensus 110 ~g~~r~~~~~~N~~i~~~i~~~i~~~~p~ 138 (340)
. .-.+....++++..+.+-+
T Consensus 77 --~-------~~~~~~~~li~Aa~~agVk 96 (233)
T PF05368_consen 77 --P-------SELEQQKNLIDAAKAAGVK 96 (233)
T ss_dssp --C-------CHHHHHHHHHHHHHHHT-S
T ss_pred --h-------hhhhhhhhHHHhhhccccc
Confidence 1 1234455667777766633
No 315
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....
Probab=96.19 E-value=0.0092 Score=54.83 Aligned_cols=101 Identities=23% Similarity=0.282 Sum_probs=69.1
Q ss_pred CeEEEEcCCCChHHHHHHHHHhC----CCc-----ceEEEEeCCC--------cHHHHHHHhcCCCCceEEEEecCCccc
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLN----PLV-----SRLALYDIAN--------TPGVAADVGHINTRSEVAGYMGNDQLG 91 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~----~~~-----~el~L~D~~~--------~~~~~~dl~~~~~~~~v~~~~~~~d~~ 91 (340)
.||++.|| |..|-.++..|... |+- ..++|+|.+- .......+.+........ .++.
T Consensus 26 ~riv~~GA-GsAg~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a~~~~~~~~~-----~~L~ 99 (255)
T PF03949_consen 26 QRIVFFGA-GSAGIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFARKTNPEKDW-----GSLL 99 (255)
T ss_dssp -EEEEEB--SHHHHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHHBSSSTTT-------SSHH
T ss_pred cEEEEeCC-ChhHHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhhccCcccccc-----cCHH
Confidence 49999998 99999888777654 653 6899999874 111222333332211111 4688
Q ss_pred cccCCC--CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCC
Q 019519 92 QALEDS--DVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVN 149 (340)
Q Consensus 92 ~al~~a--DiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d 149 (340)
++++++ |++|=+.|.+ | -+.+++.+.|.+++++.+|+-.|||..
T Consensus 100 eav~~~kPtvLIG~S~~~---g-----------~ft~evv~~Ma~~~erPIIF~LSNPt~ 145 (255)
T PF03949_consen 100 EAVKGAKPTVLIGLSGQG---G-----------AFTEEVVRAMAKHNERPIIFPLSNPTP 145 (255)
T ss_dssp HHHHCH--SEEEECSSST---T-----------SS-HHHHHHCHHHSSSEEEEE-SSSCG
T ss_pred HHHHhcCCCEEEEecCCC---C-----------cCCHHHHHHHhccCCCCEEEECCCCCC
Confidence 999999 9999887654 2 355778889999999999999999986
No 316
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.19 E-value=0.016 Score=50.95 Aligned_cols=76 Identities=21% Similarity=0.265 Sum_probs=48.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe--cCCccccccCCCCEEEEc
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM--GNDQLGQALEDSDVVIIP 103 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~--~~~d~~~al~~aDiVi~~ 103 (340)
.+++.|+||+|.+|..++..|...+. ++.+++.+.. .....++.+.. ...+.... ...++.++++++|+||.+
T Consensus 28 ~~~vlVlGgtG~iG~~~a~~l~~~g~--~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~diVi~a 104 (194)
T cd01078 28 GKTAVVLGGTGPVGQRAAVLLAREGA--RVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIKGADVVFAA 104 (194)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHhcCCEEEEC
Confidence 46999999889999999998888775 8999987642 22222332111 11222211 112334778999998887
Q ss_pred CCC
Q 019519 104 AGV 106 (340)
Q Consensus 104 ag~ 106 (340)
...
T Consensus 105 t~~ 107 (194)
T cd01078 105 GAA 107 (194)
T ss_pred CCC
Confidence 543
No 317
>PRK06523 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.009 Score=54.42 Aligned_cols=111 Identities=15% Similarity=0.187 Sum_probs=64.2
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEe-cCCcc----------cccc
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-GNDQL----------GQAL 94 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~~~d~----------~~al 94 (340)
++.++|.|+||+|.+|+.++..|+..+. +|++++.++... +.. ++.... +-.|. .+.+
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~r~~~~~----~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLLEAGA--RVVTTARSRPDD----LPE-----GVEFVAADLTTAEGCAAVARAVLERL 75 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHCCC--EEEEEeCChhhh----cCC-----ceeEEecCCCCHHHHHHHHHHHHHHc
Confidence 4457999999999999999999998887 899998764211 110 111110 11111 1223
Q ss_pred CCCCEEEEcCCCCCCC-C----CC---HHHHHHHHHH----HHHHHHHHHHHhCCCcEEEEecCCC
Q 019519 95 EDSDVVIIPAGVPRKP-G----MT---RDDLFNINAG----IVKDLCSAIAKYCPNAIVNMISNPV 148 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~-g----~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNP~ 148 (340)
...|+||+.+|..... + .+ -...+..|.. +.+.+.+.+.+.. .+.+|++|...
T Consensus 76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~ 140 (260)
T PRK06523 76 GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQ 140 (260)
T ss_pred CCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEeccc
Confidence 5689999999854211 1 11 2223444544 3445555555443 35666666543
No 318
>PRK12744 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.21 Score=45.40 Aligned_cols=156 Identities=12% Similarity=0.120 Sum_probs=79.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--c----HHHHHHHhcCCCCceEEEEe-cCCcc---ccc---
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--T----PGVAADVGHINTRSEVAGYM-GNDQL---GQA--- 93 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~----~~~~~dl~~~~~~~~v~~~~-~~~d~---~~a--- 93 (340)
+.+++.|+||+|.+|.+++..|+..+. ++++++.+. . .....++.... .++.... +-+|. ++.
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~--~vv~i~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~ 82 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGA--KAVAIHYNSAASKADAEETVAAVKAAG--AKAVAFQADLTTAAAVEKLFDD 82 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC--cEEEEecCCccchHHHHHHHHHHHHhC--CcEEEEecCcCCHHHHHHHHHH
Confidence 346899999999999999999998886 666665432 1 11222232211 1222211 11221 122
Q ss_pred ----cCCCCEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEe-cCCCCccHHHHHHHHHH
Q 019519 94 ----LEDSDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAIAKYC-PNAIVNMI-SNPVNSTVPIAAEVFKK 161 (340)
Q Consensus 94 ----l~~aDiVi~~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNP~d~~t~~~~~~~~~ 161 (340)
+...|++|+.+|..... ..+ -...+..|......+.+.+.... +.+.++++ +......
T Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~---------- 152 (257)
T PRK12744 83 AKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAF---------- 152 (257)
T ss_pred HHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhccc----------
Confidence 23679999999864211 122 22344556665555555554432 33444433 3222110
Q ss_pred hCCCCCCceEeccchhHHHHHHHHHHHcCCCCCCCceeEE
Q 019519 162 AGTYNEKKLFGVTTLDVVRAKTFYAGKANVNVAEVNVPVV 201 (340)
Q Consensus 162 sg~~~~~kviG~~~ld~~R~~~~la~~l~v~~~~v~~~v~ 201 (340)
.|....++.+......+-+.+++.++ +..|++..+
T Consensus 153 ---~~~~~~Y~~sK~a~~~~~~~la~e~~--~~~i~v~~v 187 (257)
T PRK12744 153 ---TPFYSAYAGSKAPVEHFTRAASKEFG--ARGISVTAV 187 (257)
T ss_pred ---CCCcccchhhHHHHHHHHHHHHHHhC--cCceEEEEE
Confidence 12223445543333456677777775 344554443
No 319
>PRK07574 formate dehydrogenase; Provisional
Probab=96.17 E-value=0.031 Score=54.65 Aligned_cols=95 Identities=15% Similarity=0.151 Sum_probs=60.0
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
...++|+|+|. |.+|+.++..|..-+. +|+.+|........ .... .+... .++++.+++||+|++..-
T Consensus 190 L~gktVGIvG~-G~IG~~vA~~l~~fG~--~V~~~dr~~~~~~~---~~~~---g~~~~---~~l~ell~~aDvV~l~lP 257 (385)
T PRK07574 190 LEGMTVGIVGA-GRIGLAVLRRLKPFDV--KLHYTDRHRLPEEV---EQEL---GLTYH---VSFDSLVSVCDVVTIHCP 257 (385)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCCchhh---Hhhc---Cceec---CCHHHHhhcCCEEEEcCC
Confidence 34579999998 9999999999887666 99999976421111 1100 12221 346788999999999852
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 106 VPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
.. ..+-.++- .+.+....|.+++||++
T Consensus 258 lt-----------~~T~~li~--~~~l~~mk~ga~lIN~a 284 (385)
T PRK07574 258 LH-----------PETEHLFD--ADVLSRMKRGSYLVNTA 284 (385)
T ss_pred CC-----------HHHHHHhC--HHHHhcCCCCcEEEECC
Confidence 21 12222221 23344445788998875
No 320
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.048 Score=49.93 Aligned_cols=111 Identities=17% Similarity=0.153 Sum_probs=62.0
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEe-cCCccccccC-------CCCEE
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-GNDQLGQALE-------DSDVV 100 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~~~d~~~al~-------~aDiV 100 (340)
.+|.|+||+|.+|++++..|+..+. +|++.+.+..... ...+. ..+.... +..+++++++ ..|+|
T Consensus 5 ~~vlVtGasg~iG~~~a~~l~~~g~--~V~~~~r~~~~~~--~~~~~---~~~~~D~~d~~~~~~~~~~~~~~~g~~d~l 77 (270)
T PRK06179 5 KVALVTGASSGIGRATAEKLARAGY--RVFGTSRNPARAA--PIPGV---ELLELDVTDDASVQAAVDEVIARAGRIDVL 77 (270)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCChhhcc--ccCCC---eeEEeecCCHHHHHHHHHHHHHhCCCCCEE
Confidence 4899999999999999999998887 8999987641110 00110 0111111 1112223333 46999
Q ss_pred EEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHH----HHHHhCCCcEEEEecCC
Q 019519 101 IIPAGVPRKPG---MT---RDDLFNINAGIVKDLCS----AIAKYCPNAIVNMISNP 147 (340)
Q Consensus 101 i~~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~----~i~~~~p~a~viv~tNP 147 (340)
|+++|...... .+ -...+..|..-...+.+ .+.+.+ .+.++++|..
T Consensus 78 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~ 133 (270)
T PRK06179 78 VNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSV 133 (270)
T ss_pred EECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCc
Confidence 99998753221 11 23344555544444444 444443 3456666543
No 321
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.16 E-value=0.041 Score=54.70 Aligned_cols=126 Identities=25% Similarity=0.340 Sum_probs=76.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcH---HHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEc
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP---GVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIP 103 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~---~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ 103 (340)
+.++|.|+|+ |.+|..++..|+..|+ +|+++|.+... ....+|.... .++ .... ...+...++|+||.+
T Consensus 4 ~~k~v~iiG~-g~~G~~~A~~l~~~G~--~V~~~d~~~~~~~~~~~~~l~~~~--~~~--~~~~-~~~~~~~~~d~vv~~ 75 (450)
T PRK14106 4 KGKKVLVVGA-GVSGLALAKFLKKLGA--KVILTDEKEEDQLKEALEELGELG--IEL--VLGE-YPEEFLEGVDLVVVS 75 (450)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHhcC--CEE--EeCC-cchhHhhcCCEEEEC
Confidence 3469999998 8899999999999998 99999987522 1122333212 122 2111 112345789999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCC--ccHHHHHHHHHHhC
Q 019519 104 AGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVN--STVPIAAEVFKKAG 163 (340)
Q Consensus 104 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d--~~t~~~~~~~~~sg 163 (340)
+|.+...- .....-+.+++++...+...+.. + ..+|-+|=..+ +.+.+++.+++..|
T Consensus 76 ~g~~~~~~-~~~~a~~~~i~~~~~~~~~~~~~-~-~~vI~ITGS~GKTTt~~~l~~iL~~~g 134 (450)
T PRK14106 76 PGVPLDSP-PVVQAHKKGIEVIGEVELAYRFS-K-APIVAITGTNGKTTTTTLLGEIFKNAG 134 (450)
T ss_pred CCCCCCCH-HHHHHHHCCCcEEeHHHHHHhhc-C-CCEEEEeCCCchHHHHHHHHHHHHHcC
Confidence 88752211 11112235667766655544432 2 45666766655 56666766676665
No 322
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.022 Score=51.09 Aligned_cols=34 Identities=18% Similarity=0.250 Sum_probs=30.6
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
||+.|+||+|.+|+.++..|...+. +|+++|.++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~--~v~~~~r~~ 34 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGH--KVTLVGARR 34 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 5899999999999999999998887 899998764
No 323
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=96.15 E-value=0.022 Score=57.22 Aligned_cols=98 Identities=16% Similarity=0.233 Sum_probs=58.3
Q ss_pred eEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcC-CCCceEEEEecCCccccccCCCCEEEEcCCCCC
Q 019519 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHI-NTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPR 108 (340)
Q Consensus 30 KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~-~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~~~ 108 (340)
+|+|||. |.+|.+++..|+..++ +|.++|.+..+ ..++... .....+.......++.+.++++|+|+++.-
T Consensus 1 ~IG~IGL-G~MG~~mA~nL~~~G~--~V~v~drt~~~--~~~l~~~~~~g~~~~~~~s~~e~v~~l~~~dvIil~v~--- 72 (467)
T TIGR00873 1 DIGVIGL-AVMGSNLALNMADHGF--TVSVYNRTPEK--TDEFLAEHAKGKKIVGAYSIEEFVQSLERPRKIMLMVK--- 72 (467)
T ss_pred CEEEEee-HHHHHHHHHHHHhcCC--eEEEEeCCHHH--HHHHHhhccCCCCceecCCHHHHHhhcCCCCEEEEECC---
Confidence 4899998 9999999999999998 99999987522 2223321 000012222111233334568999888741
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecCC
Q 019519 109 KPGMTRDDLFNINAGIVKDLCSAIAKY-CPNAIVNMISNP 147 (340)
Q Consensus 109 ~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP 147 (340)
++ +.+.++.+.+..+ .++.++|..||-
T Consensus 73 -~~-----------~~v~~Vi~~l~~~L~~g~iIID~gns 100 (467)
T TIGR00873 73 -AG-----------APVDAVINQLLPLLEKGDIIIDGGNS 100 (467)
T ss_pred -Cc-----------HHHHHHHHHHHhhCCCCCEEEECCCc
Confidence 11 2223333444444 367788888763
No 324
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=96.15 E-value=0.024 Score=52.82 Aligned_cols=100 Identities=24% Similarity=0.333 Sum_probs=69.6
Q ss_pred CeEEEEcCCCChHHHHHHHHHhC----CC-----cceEEEEeCCC--------cHHHHHHHhcCCCCceEEEEecCCccc
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLN----PL-----VSRLALYDIAN--------TPGVAADVGHINTRSEVAGYMGNDQLG 91 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~----~~-----~~el~L~D~~~--------~~~~~~dl~~~~~~~~v~~~~~~~d~~ 91 (340)
.||+|.|| |..|..++..|... |+ -..++++|.+- .......+.+.. . . . ...++.
T Consensus 26 ~~iv~~GA-GsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~-~-~-~---~~~~L~ 98 (279)
T cd05312 26 QRILFLGA-GSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKD-E-E-K---EGKSLL 98 (279)
T ss_pred cEEEEECc-CHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhc-C-c-c---cCCCHH
Confidence 59999998 99999998777653 54 25899999874 111112222211 1 1 1 125788
Q ss_pred cccC--CCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCC
Q 019519 92 QALE--DSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVN 149 (340)
Q Consensus 92 ~al~--~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d 149 (340)
++++ ++|++|=+.+.+ | -+.+++.+.|.++|++.+|+-.|||..
T Consensus 99 e~i~~v~ptvlIG~S~~~---g-----------~ft~evv~~Ma~~~~~PIIFaLSNPt~ 144 (279)
T cd05312 99 EVVKAVKPTVLIGLSGVG---G-----------AFTEEVVRAMAKSNERPIIFALSNPTS 144 (279)
T ss_pred HHHHhcCCCEEEEeCCCC---C-----------CCCHHHHHHHHhcCCCCEEEECCCcCC
Confidence 9999 999998876544 2 244678888899999999999999975
No 325
>PRK07023 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.017 Score=52.04 Aligned_cols=35 Identities=17% Similarity=0.177 Sum_probs=31.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
||+|.|+||+|.+|..++..|+..|. ++++++.+.
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~--~v~~~~r~~ 35 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGI--AVLGVARSR 35 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCC--EEEEEecCc
Confidence 57999999999999999999998887 899998765
No 326
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=96.14 E-value=0.057 Score=56.01 Aligned_cols=138 Identities=14% Similarity=0.175 Sum_probs=82.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCcc----ccccCCCCEEEEc
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQL----GQALEDSDVVIIP 103 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~----~~al~~aDiVi~~ 103 (340)
..+|.|+|. |.+|+.++..|...+. +++++|.|+.. +..+.+... .-+.+. .+|. +..+++||.||++
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~--~vvvID~d~~~--v~~~~~~g~-~v~~GD--at~~~~L~~agi~~A~~vv~~ 471 (601)
T PRK03659 400 KPQVIIVGF-GRFGQVIGRLLMANKM--RITVLERDISA--VNLMRKYGY-KVYYGD--ATQLELLRAAGAEKAEAIVIT 471 (601)
T ss_pred cCCEEEecC-chHHHHHHHHHHhCCC--CEEEEECCHHH--HHHHHhCCC-eEEEee--CCCHHHHHhcCCccCCEEEEE
Confidence 369999998 9999999999988887 89999988622 222333221 123332 2222 1346799999998
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEE-ecCCCCccHHHHHHHHHHhCCCCCCceEeccchhHHHHH
Q 019519 104 AGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNM-ISNPVNSTVPIAAEVFKKAGTYNEKKLFGVTTLDVVRAK 182 (340)
Q Consensus 104 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv-~tNP~d~~t~~~~~~~~~sg~~~~~kviG~~~ld~~R~~ 182 (340)
-+.+ ..|. .++..+++++|+..++. +.||.+.- .++..| .+.++-=+...+..+.
T Consensus 472 ~~d~-----------~~n~----~i~~~~r~~~p~~~IiaRa~~~~~~~------~L~~~G---a~~vv~e~~es~l~l~ 527 (601)
T PRK03659 472 CNEP-----------EDTM----KIVELCQQHFPHLHILARARGRVEAH------ELLQAG---VTQFSRETFSSALELG 527 (601)
T ss_pred eCCH-----------HHHH----HHHHHHHHHCCCCeEEEEeCCHHHHH------HHHhCC---CCEEEccHHHHHHHHH
Confidence 5322 2443 35566778889876654 45554311 134555 2444433333333454
Q ss_pred HHHHHHcCCCCCCCc
Q 019519 183 TFYAGKANVNVAEVN 197 (340)
Q Consensus 183 ~~la~~l~v~~~~v~ 197 (340)
...=..+|+++.+++
T Consensus 528 ~~~L~~lg~~~~~~~ 542 (601)
T PRK03659 528 RKTLVSLGMHPHQAQ 542 (601)
T ss_pred HHHHHHcCCCHHHHH
Confidence 555567788776664
No 327
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.13 E-value=0.037 Score=50.89 Aligned_cols=68 Identities=21% Similarity=0.254 Sum_probs=44.8
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCC-cceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPL-VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
|||+|||+ |.+|++++..|...++ ..++.++|.+... +.++.+.. ..+... .+..+.+++||+||++.
T Consensus 1 m~IgiIG~-G~mG~aia~~L~~~g~~~~~i~v~~r~~~~--~~~l~~~~--~~~~~~---~~~~~~~~~aDvVilav 69 (258)
T PRK06476 1 MKIGFIGT-GAITEAMVTGLLTSPADVSEIIVSPRNAQI--AARLAERF--PKVRIA---KDNQAVVDRSDVVFLAV 69 (258)
T ss_pred CeEEEECc-CHHHHHHHHHHHhCCCChheEEEECCCHHH--HHHHHHHc--CCceEe---CCHHHHHHhCCEEEEEe
Confidence 58999997 9999999999987764 3456778765422 22232211 112222 34456678999999986
No 328
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.13 E-value=0.058 Score=48.45 Aligned_cols=115 Identities=20% Similarity=0.236 Sum_probs=64.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCccc---ccc-------
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQLG---QAL------- 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~~---~al------- 94 (340)
++++.|+||+|.+|..++..|+.++. +|+++|.++. .....++.... .++.... +-+|.+ .++
T Consensus 6 ~k~vlItG~sg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (241)
T PRK07454 6 MPRALITGASSGIGKATALAFAKAGW--DLALVARSQDALEALAAELRSTG--VKAAAYSIDLSNPEAIAPGIAELLEQF 81 (241)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhCC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999998887 8999998752 22222232211 1222211 112221 222
Q ss_pred CCCCEEEEcCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHHHhCCCcEEEEecCC
Q 019519 95 EDSDVVIIPAGVPRKP---GMT---RDDLFNINAGIV----KDLCSAIAKYCPNAIVNMISNP 147 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~---g~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tNP 147 (340)
...|+||..+|..... ..+ -...+..|+... +.+.+.+.+. ..+.++++|..
T Consensus 82 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~ 143 (241)
T PRK07454 82 GCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRAR-GGGLIINVSSI 143 (241)
T ss_pred CCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCcEEEEEccH
Confidence 3589999999864321 122 223344555543 3444444433 23556666543
No 329
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.12 E-value=0.08 Score=47.07 Aligned_cols=114 Identities=18% Similarity=0.232 Sum_probs=64.2
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEe-cCCcccc---ccC--CCCEEEE
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-GNDQLGQ---ALE--DSDVVII 102 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~~~d~~~---al~--~aDiVi~ 102 (340)
.++.|+||+|.+|++++..|+..+. +++++|.+.... .++...... -+.... ...++++ .+. ..|+||+
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~--~v~~~~r~~~~~--~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~d~vi~ 76 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW--RVIATARDAAAL--AALQALGAE-ALALDVADPASVAGLAWKLDGEALDAAVY 76 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC--EEEEEECCHHHH--HHHHhccce-EEEecCCCHHHHHHHHHHhcCCCCCEEEE
Confidence 4899999999999999999988876 899999875211 122221110 111110 1111212 122 4799999
Q ss_pred cCCCCC--C-C--CCCH---HHHHHHHHHHHHHHHHHHHHhC--CCcEEEEecCC
Q 019519 103 PAGVPR--K-P--GMTR---DDLFNINAGIVKDLCSAIAKYC--PNAIVNMISNP 147 (340)
Q Consensus 103 ~ag~~~--~-~--g~~r---~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tNP 147 (340)
++|... . + ..+. ...+..|..-...+.+.+..+- ..+.+++++..
T Consensus 77 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~ 131 (222)
T PRK06953 77 VAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSR 131 (222)
T ss_pred CCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCc
Confidence 998642 1 1 1122 3345667776666666665432 23455555443
No 330
>PRK08703 short chain dehydrogenase; Provisional
Probab=96.12 E-value=0.33 Score=43.44 Aligned_cols=36 Identities=22% Similarity=0.329 Sum_probs=31.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
+.++|.|+||+|.+|.+++..|+..+. +|++++.++
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~--~V~~~~r~~ 40 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA--TVILVARHQ 40 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC--EEEEEeCCh
Confidence 346899999999999999999998887 899999876
No 331
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.11 E-value=0.094 Score=49.40 Aligned_cols=82 Identities=22% Similarity=0.328 Sum_probs=51.5
Q ss_pred CCCCCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC---cHHHHHHHhcCCCCceEEEEe-cCCc---cccc--
Q 019519 23 SESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN---TPGVAADVGHINTRSEVAGYM-GNDQ---LGQA-- 93 (340)
Q Consensus 23 ~~~~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~~~d---~~~a-- 93 (340)
....+.+++.|+||+|.+|..++..|+..|. ++++.|... .+..+.++.... .++.... +-+| ..+.
T Consensus 7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga--~Vv~~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dv~d~~~~~~~~~ 82 (306)
T PRK07792 7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGA--TVVVNDVASALDASDVLDEIRAAG--AKAVAVAGDISQRATADELVA 82 (306)
T ss_pred CcCCCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEecCCchhHHHHHHHHHHhcC--CeEEEEeCCCCCHHHHHHHHH
Confidence 3334557999999999999999999998887 899998754 222233343221 2232221 1112 1111
Q ss_pred ----cCCCCEEEEcCCCCC
Q 019519 94 ----LEDSDVVIIPAGVPR 108 (340)
Q Consensus 94 ----l~~aDiVi~~ag~~~ 108 (340)
+...|++|+.+|...
T Consensus 83 ~~~~~g~iD~li~nAG~~~ 101 (306)
T PRK07792 83 TAVGLGGLDIVVNNAGITR 101 (306)
T ss_pred HHHHhCCCCEEEECCCCCC
Confidence 236899999999764
No 332
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.11 E-value=0.14 Score=46.71 Aligned_cols=115 Identities=24% Similarity=0.276 Sum_probs=66.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCccc---c------ccC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQLG---Q------ALE 95 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~~---~------al~ 95 (340)
..+|.|+||+|.+|..++..|+..|. +|++++.++. .....++.. . .++.... +-.|.+ + .+.
T Consensus 5 ~~~vlItG~s~~iG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-~--~~~~~~~~D~~d~~~~~~~~~~~~~~~ 79 (263)
T PRK09072 5 DKRVLLTGASGGIGQALAEALAAAGA--RLLLVGRNAEKLEALAARLPY-P--GRHRWVVADLTSEAGREAVLARAREMG 79 (263)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHhc-C--CceEEEEccCCCHHHHHHHHHHHHhcC
Confidence 46899999999999999999998887 8999998752 222222311 1 1232221 112221 1 134
Q ss_pred CCCEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEecCC
Q 019519 96 DSDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISNP 147 (340)
Q Consensus 96 ~aDiVi~~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP 147 (340)
..|+||+++|..... ..+ -...+..|......+.+.+..+ .+.+.+++++..
T Consensus 80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~ 140 (263)
T PRK09072 80 GINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGST 140 (263)
T ss_pred CCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecCh
Confidence 679999999864321 112 1234456666555555555432 223566666553
No 333
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.10 E-value=0.046 Score=47.48 Aligned_cols=100 Identities=24% Similarity=0.393 Sum_probs=61.4
Q ss_pred CCCCCCCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEE
Q 019519 21 YSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVV 100 (340)
Q Consensus 21 ~~~~~~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiV 100 (340)
+........+|+|+|. |.+|+.++..+..-|. +|..+|....... ...+. .+.. .++++.++.||+|
T Consensus 29 ~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~--~~~~~----~~~~----~~l~ell~~aDiv 95 (178)
T PF02826_consen 29 FPGRELRGKTVGIIGY-GRIGRAVARRLKAFGM--RVIGYDRSPKPEE--GADEF----GVEY----VSLDELLAQADIV 95 (178)
T ss_dssp TTBS-STTSEEEEEST-SHHHHHHHHHHHHTT---EEEEEESSCHHHH--HHHHT----TEEE----SSHHHHHHH-SEE
T ss_pred CCccccCCCEEEEEEE-cCCcCeEeeeeecCCc--eeEEecccCChhh--hcccc----ccee----eehhhhcchhhhh
Confidence 3333445679999998 9999999999987676 9999998763222 11111 1222 3567889999999
Q ss_pred EEcCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCC
Q 019519 101 IIPAG-VPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNP 147 (340)
Q Consensus 101 i~~ag-~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP 147 (340)
++..- .+...+.- |. +.++...+++++||++--
T Consensus 96 ~~~~plt~~T~~li-------~~-------~~l~~mk~ga~lvN~aRG 129 (178)
T PF02826_consen 96 SLHLPLTPETRGLI-------NA-------EFLAKMKPGAVLVNVARG 129 (178)
T ss_dssp EE-SSSSTTTTTSB-------SH-------HHHHTSTTTEEEEESSSG
T ss_pred hhhhccccccceee-------ee-------eeeeccccceEEEeccch
Confidence 99753 22222331 11 123334478899988654
No 334
>PRK08264 short chain dehydrogenase; Validated
Probab=96.10 E-value=0.051 Score=48.65 Aligned_cols=116 Identities=13% Similarity=0.045 Sum_probs=63.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEe-cCCcccccc---CCCCEEEEc
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-GNDQLGQAL---EDSDVVIIP 103 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~~~d~~~al---~~aDiVi~~ 103 (340)
..+|.|+||+|.+|+.++..|+..+. .+|++++.+...... ..... ..+.... ...++++.+ ...|+||+.
T Consensus 6 ~~~vlItGgsg~iG~~la~~l~~~G~-~~V~~~~r~~~~~~~---~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 80 (238)
T PRK08264 6 GKVVLVTGANRGIGRAFVEQLLARGA-AKVYAAARDPESVTD---LGPRV-VPLQLDVTDPASVAAAAEAASDVTILVNN 80 (238)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCc-ccEEEEecChhhhhh---cCCce-EEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 45899999999999999999998774 368888876522111 11010 0111111 111222222 358999999
Q ss_pred CCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCcEEEEecCCC
Q 019519 104 AGVPRKP----GMTR---DDLFNINAGIVKDLCSAIAKY---CPNAIVNMISNPV 148 (340)
Q Consensus 104 ag~~~~~----g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP~ 148 (340)
+|..... ..+. ...+..|..-...+.+.+.+. ...+.++++|...
T Consensus 81 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~ 135 (238)
T PRK08264 81 AGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVL 135 (238)
T ss_pred CCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChh
Confidence 9873211 1222 233455665555555554432 2345666666543
No 335
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.17 Score=47.33 Aligned_cols=115 Identities=25% Similarity=0.278 Sum_probs=65.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEE-ecCCccc---c-------c
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGY-MGNDQLG---Q-------A 93 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~-~~~~d~~---~-------a 93 (340)
+..+|.|+||+|.+|..++..|+..|. +|++.+.++. +....++... ..+... .+-+|.+ + .
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~l~~~~~~l~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~ 82 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA--KLALVDLEEAELAALAAELGGD---DRVLTVVADVTDLAAMQAAAEEAVER 82 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcCC---CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 446899999999999999999999887 8999998752 2223333321 122211 1112221 1 1
Q ss_pred cCCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHhC--CCcEEEEecC
Q 019519 94 LEDSDVVIIPAGVPRKP---GMTR---DDLFNINAGIVKDLCSAIAKYC--PNAIVNMISN 146 (340)
Q Consensus 94 l~~aDiVi~~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tN 146 (340)
+...|+||+.+|..... ..+. ...+..|......+++.+..+- ..+.|+++|.
T Consensus 83 ~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS 143 (296)
T PRK05872 83 FGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSS 143 (296)
T ss_pred cCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 34679999999864311 1222 2334556655555544443321 2456666664
No 336
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=96.09 E-value=0.055 Score=48.59 Aligned_cols=96 Identities=23% Similarity=0.313 Sum_probs=66.2
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCC-CcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNP-LVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVP 107 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~-~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~~ 107 (340)
+||+|||+ |.+|..+.-.+-... .+.-+.+||.+..+ +..+......+.. +++.+.+.+.|++|.+|+
T Consensus 1 l~vgiVGc-GaIG~~l~e~v~~~~~~~e~v~v~D~~~ek--~~~~~~~~~~~~~------s~ide~~~~~DlvVEaAS-- 69 (255)
T COG1712 1 LKVGIVGC-GAIGKFLLELVRDGRVDFELVAVYDRDEEK--AKELEASVGRRCV------SDIDELIAEVDLVVEAAS-- 69 (255)
T ss_pred CeEEEEec-cHHHHHHHHHHhcCCcceeEEEEecCCHHH--HHHHHhhcCCCcc------ccHHHHhhccceeeeeCC--
Confidence 58999997 999999987776653 35567888877532 2233322211111 345566799999999985
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCC
Q 019519 108 RKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVN 149 (340)
Q Consensus 108 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d 149 (340)
.+-+++++.++=+.+.|.+|+-++-=+|
T Consensus 70 --------------~~Av~e~~~~~L~~g~d~iV~SVGALad 97 (255)
T COG1712 70 --------------PEAVREYVPKILKAGIDVIVMSVGALAD 97 (255)
T ss_pred --------------HHHHHHHhHHHHhcCCCEEEEechhccC
Confidence 4678899999988888988876554444
No 337
>PRK05855 short chain dehydrogenase; Validated
Probab=96.09 E-value=0.12 Score=52.42 Aligned_cols=117 Identities=16% Similarity=0.185 Sum_probs=68.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCccc---cc-------
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQLG---QA------- 93 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~~---~a------- 93 (340)
+.+++.|+||+|.+|.+++..|+..|. +|++.|.+.. ...+.++..... ++.... +-+|.+ +.
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~~ 389 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA--EVVASDIDEAAAERTAELIRAAGA--VAHAYRVDVSDADAMEAFAEWVRAE 389 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCC--eEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 456899999999999999999999887 8999998752 222333332211 222211 112221 11
Q ss_pred cCCCCEEEEcCCCCCCC---CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCcEEEEecCC
Q 019519 94 LEDSDVVIIPAGVPRKP---GMTR---DDLFNINAG----IVKDLCSAIAKYCPNAIVNMISNP 147 (340)
Q Consensus 94 l~~aDiVi~~ag~~~~~---g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNP 147 (340)
+...|++|+.||..... ..+. ...+..|.. ..+.+.+.+.+.+..+.||++|.-
T Consensus 390 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~ 453 (582)
T PRK05855 390 HGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASA 453 (582)
T ss_pred cCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECCh
Confidence 23479999999875321 1222 223445644 444455555555555677777654
No 338
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=96.09 E-value=0.2 Score=45.37 Aligned_cols=116 Identities=16% Similarity=0.217 Sum_probs=66.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCCcc---cc-------c
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GNDQL---GQ-------A 93 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~d~---~~-------a 93 (340)
..++|.|+||+|.+|++++..|...+. ++++.|.+. ......++.+... ++.... +-+|. .+ .
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~--~vv~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~ 85 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA--SVVVSDINADAANHVVDEIQQLGG--QAFACRCDITSEQELSALADFALSK 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHH
Confidence 357999999999999999999998887 899998765 2222333433211 121111 11121 11 1
Q ss_pred cCCCCEEEEcCCCCCC--CCCCHHH---HHHHHHHHHHHHHHHHHHh---CCCcEEEEecC
Q 019519 94 LEDSDVVIIPAGVPRK--PGMTRDD---LFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (340)
Q Consensus 94 l~~aDiVi~~ag~~~~--~g~~r~~---~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 146 (340)
+...|++|+.+|.... ...+..+ .+..|+.-...+.+.+..+ ...+.++++|.
T Consensus 86 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS 146 (255)
T PRK06113 86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITS 146 (255)
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEec
Confidence 2357999999885321 1233322 2556766655555555422 23345665654
No 339
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=96.08 E-value=0.36 Score=43.97 Aligned_cols=36 Identities=14% Similarity=0.320 Sum_probs=30.2
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCC
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIA 63 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~ 63 (340)
++.++|.|+||++.+|..++..|+..+. +|++.+..
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~~~ 41 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQSGV--NIAFTYNS 41 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCC
Confidence 4456899999999999999999998887 78877543
No 340
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.057 Score=48.93 Aligned_cols=36 Identities=19% Similarity=0.289 Sum_probs=31.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
+.++|.|+||+|.+|++++..|+..+. +|++.+.++
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~--~Vi~~~r~~ 43 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGA--KVVLASRRV 43 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 456999999999999999999998887 899998875
No 341
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.07 E-value=0.11 Score=47.16 Aligned_cols=156 Identities=15% Similarity=0.175 Sum_probs=83.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCCcc---ccc-------c
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GNDQL---GQA-------L 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~d~---~~a-------l 94 (340)
.+++.|+||+|.+|..++..|+..|. +|++.+.++ ......++.+.. .++.... +-+|. ++. +
T Consensus 6 ~k~~lItGas~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 6 GKVAIITGASSGIGRAAAKLFAREGA--KVVVGARRQAELDQLVAEIRAEG--GEAVALAGDVRDEAYAKALVALAVERF 81 (254)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 35899999999999999999999887 899999865 223333443322 1222221 11121 112 2
Q ss_pred CCCCEEEEcCCCCC--CC--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHHHHhC
Q 019519 95 EDSDVVIIPAGVPR--KP--GMTR---DDLFNINAG----IVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAG 163 (340)
Q Consensus 95 ~~aDiVi~~ag~~~--~~--g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~sg 163 (340)
...|++|+.+|... .+ ..+. ...+..|.. ..+.+.+.+.+. ..+.+++++..... ..+
T Consensus 82 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~~~iv~~sS~~~~----------~~~ 150 (254)
T PRK07478 82 GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-GGGSLIFTSTFVGH----------TAG 150 (254)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEechHhh----------ccC
Confidence 36899999998631 22 2222 334556664 444555555443 34556656543211 011
Q ss_pred CCCCCceEeccchhHHHHHHHHHHHcCCCCCCCceeEE
Q 019519 164 TYNEKKLFGVTTLDVVRAKTFYAGKANVNVAEVNVPVV 201 (340)
Q Consensus 164 ~~~~~kviG~~~ld~~R~~~~la~~l~v~~~~v~~~v~ 201 (340)
.+..-.++.+......+-..+++.++ +..|++..+
T Consensus 151 -~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v 185 (254)
T PRK07478 151 -FPGMAAYAASKAGLIGLTQVLAAEYG--AQGIRVNAL 185 (254)
T ss_pred -CCCcchhHHHHHHHHHHHHHHHHHHh--hcCEEEEEE
Confidence 33333444443223345566666653 344554444
No 342
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.07 E-value=0.088 Score=47.60 Aligned_cols=115 Identities=12% Similarity=0.097 Sum_probs=64.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCCcc---ccc-------c
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GNDQL---GQA-------L 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~d~---~~a-------l 94 (340)
..+|.|+||+|.+|.+++..|...|. .|+++|.+. ......++.+... ++.... +-+|. +++ +
T Consensus 8 ~k~vlItGas~gIG~~l~~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK07035 8 GKIALVTGASRGIGEAIAKLLAQQGA--HVIVSSRKLDGCQAVADAIVAAGG--KAEALACHIGEMEQIDALFAHIRERH 83 (252)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCC--eEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999998887 899999865 2333333433221 111111 11121 111 2
Q ss_pred CCCCEEEEcCCCCC--CC--CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCcEEEEecC
Q 019519 95 EDSDVVIIPAGVPR--KP--GMTR---DDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (340)
Q Consensus 95 ~~aDiVi~~ag~~~--~~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 146 (340)
...|++|+.+|... .+ ..+. ...+..|......+.+.+.++ ...+.+++++.
T Consensus 84 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 145 (252)
T PRK07035 84 GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVAS 145 (252)
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECc
Confidence 35799999887421 11 2222 234455655544444444322 23456666654
No 343
>PRK07577 short chain dehydrogenase; Provisional
Probab=96.06 E-value=0.052 Score=48.38 Aligned_cols=35 Identities=29% Similarity=0.281 Sum_probs=31.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
.++|.|+||+|.+|+.++..|+..+. ++++++.+.
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~--~v~~~~r~~ 37 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGH--QVIGIARSA 37 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC--EEEEEeCCc
Confidence 46899999999999999999998886 899998765
No 344
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=96.05 E-value=0.24 Score=45.68 Aligned_cols=144 Identities=22% Similarity=0.180 Sum_probs=74.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVP 107 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~~ 107 (340)
++||+|+|+.|.+|+.++..+...+-+.=+.++|.+....... . . ..+.. .+|+++.++++|+||... .|
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~--~--~--~~i~~---~~dl~~ll~~~DvVid~t-~p 70 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ--G--A--LGVAI---TDDLEAVLADADVLIDFT-TP 70 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc--C--C--CCccc---cCCHHHhccCCCEEEECC-CH
Confidence 4799999977999999987776554332344578765211111 1 1 12222 256777778999999664 11
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEec-cchhH---HHHHH
Q 019519 108 RKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDV---VRAKT 183 (340)
Q Consensus 108 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~-~~ld~---~R~~~ 183 (340)
....+++...-+.+.+. + +. |.+....-+..+.+.+... .-++.. ..+.. .++..
T Consensus 71 ---------------~~~~~~~~~al~~G~~v--v-ig-ttG~s~~~~~~l~~aa~~~--~v~~s~n~s~g~~~~~~l~~ 129 (257)
T PRK00048 71 ---------------EATLENLEFALEHGKPL--V-IG-TTGFTEEQLAELEEAAKKI--PVVIAPNFSIGVNLLMKLAE 129 (257)
T ss_pred ---------------HHHHHHHHHHHHcCCCE--E-EE-CCCCCHHHHHHHHHHhcCC--CEEEECcchHHHHHHHHHHH
Confidence 22245555555555432 2 33 3332222111112221101 122332 22222 34555
Q ss_pred HHHHHcCCCCCCCceeEEEecCC
Q 019519 184 FYAGKANVNVAEVNVPVVGGHAG 206 (340)
Q Consensus 184 ~la~~l~v~~~~v~~~v~G~hg~ 206 (340)
.+++.|+ + .+..++--|+.
T Consensus 130 ~aa~~l~--~--~d~ei~E~HH~ 148 (257)
T PRK00048 130 KAAKYLG--D--YDIEIIEAHHR 148 (257)
T ss_pred HHHHhcC--C--CCEEEEEccCC
Confidence 6666665 2 67778888886
No 345
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.05 E-value=0.071 Score=48.50 Aligned_cols=115 Identities=17% Similarity=0.197 Sum_probs=64.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC-cHHHHHHHhcCCCCceEEEEe-cCCc---cccccC-------
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYM-GNDQ---LGQALE------- 95 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al~------- 95 (340)
..+|.|+||+|.+|..++..|+..|. .+++++.++ .+.....+.... .++.... +-+| ..+.++
T Consensus 15 ~k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~g 90 (258)
T PRK06935 15 GKVAIVTGGNTGLGQGYAVALAKAGA--DIIITTHGTNWDETRRLIEKEG--RKVTFVQVDLTKPESAEKVVKEALEEFG 90 (258)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCcHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999998887 889998764 222222222211 1222221 1122 112222
Q ss_pred CCCEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHH----HHHHHhCCCcEEEEecCC
Q 019519 96 DSDVVIIPAGVPRK-P--GMT---RDDLFNINAGIVKDLC----SAIAKYCPNAIVNMISNP 147 (340)
Q Consensus 96 ~aDiVi~~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~----~~i~~~~p~a~viv~tNP 147 (340)
..|++|+++|.... + ..+ ....+..|+.....+. +.+.+. ..+.+++++..
T Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~ 151 (258)
T PRK06935 91 KIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQ-GSGKIINIASM 151 (258)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhc-CCeEEEEECCH
Confidence 67999999986421 1 122 2233455555544444 444333 24566666654
No 346
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=96.03 E-value=0.022 Score=53.67 Aligned_cols=63 Identities=21% Similarity=0.342 Sum_probs=45.3
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
|||+|||. |.+|+.++..|...++ ++.++|+++. . .++.... .... .+..++.++||+||++.
T Consensus 1 m~Ig~IGl-G~MG~~ma~~L~~~G~--~v~v~~~~~~-~--~~~~~~g----~~~~---~s~~~~~~~advVi~~v 63 (292)
T PRK15059 1 MKLGFIGL-GIMGTPMAINLARAGH--QLHVTTIGPV-A--DELLSLG----AVSV---ETARQVTEASDIIFIMV 63 (292)
T ss_pred CeEEEEcc-CHHHHHHHHHHHHCCC--eEEEEeCCHh-H--HHHHHcC----Ceec---CCHHHHHhcCCEEEEeC
Confidence 48999997 9999999999999887 8899998652 1 2232211 1111 23457789999999984
No 347
>KOG2666 consensus UDP-glucose/GDP-mannose dehydrogenase [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=96.03 E-value=0.018 Score=54.05 Aligned_cols=78 Identities=21% Similarity=0.361 Sum_probs=48.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcH--HHHH-----------HHhcCCCCceEEEEecCCcccccc
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAA-----------DVGHINTRSEVAGYMGNDQLGQAL 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~--~~~~-----------dl~~~~~~~~v~~~~~~~d~~~al 94 (340)
++||+-||| |.||...+..++..=.--++.++|++..+ ++-- |.-......++- + ++|.+.++
T Consensus 1 ~~kicciga-gyvggptcavia~kcp~i~vtvvd~s~~ri~~wnsd~lpiyepgldevv~~crgknlf-f--stdiekai 76 (481)
T KOG2666|consen 1 MVKICCIGA-GYVGGPTCAVIALKCPDIEVTVVDISVPRINAWNSDKLPIYEPGLDEVVKQCRGKNLF-F--STDIEKAI 76 (481)
T ss_pred CceEEEecC-cccCCcchheeeecCCceEEEEEecCchHhhcccCCCCcccCCCHHHHHHHhcCCcee-e--ecchHHHh
Confidence 469999998 99997665444433222389999998621 1100 010000112333 3 36889999
Q ss_pred CCCCEEEEcCCCCCC
Q 019519 95 EDSDVVIIPAGVPRK 109 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~ 109 (340)
+.||+|++..-.|.|
T Consensus 77 ~eadlvfisvntptk 91 (481)
T KOG2666|consen 77 KEADLVFISVNTPTK 91 (481)
T ss_pred hhcceEEEEecCCcc
Confidence 999999998776654
No 348
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=96.03 E-value=0.067 Score=50.56 Aligned_cols=104 Identities=17% Similarity=0.102 Sum_probs=68.9
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC-----cHHHHHHHhcCCCCceEEEEec-CCc---ccccc--CCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-----TPGVAADVGHINTRSEVAGYMG-NDQ---LGQAL--EDS 97 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~-----~~~~~~dl~~~~~~~~v~~~~~-~~d---~~~al--~~a 97 (340)
..|.|+||+|++||+.+..|...++ +++++|... .-.....+.+.. ..|..... -.| +++.| ..-
T Consensus 3 ~~VLVtGgaGyiGsht~l~L~~~gy--~v~~vDNl~n~~~~sl~r~~~l~~~~--~~v~f~~~Dl~D~~~L~kvF~~~~f 78 (343)
T KOG1371|consen 3 KHVLVTGGAGYIGSHTVLALLKRGY--GVVIVDNLNNSYLESLKRVRQLLGEG--KSVFFVEGDLNDAEALEKLFSEVKF 78 (343)
T ss_pred cEEEEecCCcceehHHHHHHHhCCC--cEEEEecccccchhHHHHHHHhcCCC--CceEEEEeccCCHHHHHHHHhhcCC
Confidence 5899999999999999999999998 999999754 122223333321 23333221 112 12222 356
Q ss_pred CEEEEcCCCCCC-CC-CCHHHHHHHHHHHHHHHHHHHHHhC
Q 019519 98 DVVIIPAGVPRK-PG-MTRDDLFNINAGIVKDLCSAIAKYC 136 (340)
Q Consensus 98 DiVi~~ag~~~~-~g-~~r~~~~~~N~~i~~~i~~~i~~~~ 136 (340)
|-|++.|+.... +. +.+..+...|+--...+.+.+++++
T Consensus 79 d~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~ 119 (343)
T KOG1371|consen 79 DAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN 119 (343)
T ss_pred ceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC
Confidence 889998775421 11 2356677889999999999999997
No 349
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=96.02 E-value=0.045 Score=48.80 Aligned_cols=114 Identities=20% Similarity=0.282 Sum_probs=66.4
Q ss_pred EEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC---cHHHHHHHhcCCCCceEEEEe-cCCc---ccccc-------CC
Q 019519 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN---TPGVAADVGHINTRSEVAGYM-GNDQ---LGQAL-------ED 96 (340)
Q Consensus 31 I~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------~~ 96 (340)
|.|+|++|.+|+.++..|+.+++ ++++.+.+. ......++.+... ++.... +-+| +.+++ ..
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGA--KVIITYRSSEEGAEEVVEELKAYGV--KALGVVCDVSDREDVKAVVEEIEEELGP 76 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCchhHHHHHHHHHHhcCC--ceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 46899999999999999998887 899998764 1222333432221 122111 1112 22222 34
Q ss_pred CCEEEEcCCCCCCC---CC---CHHHHHHHHHHHHHHHHHHHHHhC---CCcEEEEecCCC
Q 019519 97 SDVVIIPAGVPRKP---GM---TRDDLFNINAGIVKDLCSAIAKYC---PNAIVNMISNPV 148 (340)
Q Consensus 97 aDiVi~~ag~~~~~---g~---~r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tNP~ 148 (340)
.|+||+.+|..... +. .....+..|......+.+.+..+. ..+.++++|...
T Consensus 77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~ 137 (239)
T TIGR01830 77 IDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVV 137 (239)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCcc
Confidence 69999998864211 11 123456677777777777665542 234666665543
No 350
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=96.01 E-value=0.035 Score=51.81 Aligned_cols=95 Identities=24% Similarity=0.273 Sum_probs=65.4
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccC--CCCEEEEcCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALE--DSDVVIIPAGV 106 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~--~aDiVi~~ag~ 106 (340)
|||.|+|+.|++|+.+...+. .+. +++-.|..+ +|+.+.. .+.+.++ .-|+||++|.+
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~--~v~a~~~~~-----~Ditd~~------------~v~~~i~~~~PDvVIn~AAy 60 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEF--EVIATDRAE-----LDITDPD------------AVLEVIRETRPDVVINAAAY 60 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCc--eEEeccCcc-----ccccChH------------HHHHHHHhhCCCEEEECccc
Confidence 579999999999999987776 334 677666543 2333221 1223344 56999999987
Q ss_pred CCCCC--CCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 107 PRKPG--MTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 107 ~~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
..-.. .++..-+.-|......+++..++. .+++|-+|
T Consensus 61 t~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~--ga~lVhiS 99 (281)
T COG1091 61 TAVDKAESEPELAFAVNATGAENLARAAAEV--GARLVHIS 99 (281)
T ss_pred cccccccCCHHHHHHhHHHHHHHHHHHHHHh--CCeEEEee
Confidence 65432 346666788999999999999987 45555554
No 351
>PRK07825 short chain dehydrogenase; Provisional
Probab=95.99 E-value=0.14 Score=46.97 Aligned_cols=112 Identities=21% Similarity=0.175 Sum_probs=64.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEecCCcc----------ccccC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYMGNDQL----------GQALE 95 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~~~d~----------~~al~ 95 (340)
.++|.|+||+|.+|..++..|+..+. .+++.+.++. .....++.+.. -+.. +-+|. .+.+.
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~---~~~~--D~~~~~~~~~~~~~~~~~~~ 77 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA--RVAIGDLDEALAKETAAELGLVV---GGPL--DVTDPASFAAFLDAVEADLG 77 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhccce---EEEc--cCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999998887 7999987652 22222222111 0111 11111 12235
Q ss_pred CCCEEEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHHHhCCCcEEEEecCC
Q 019519 96 DSDVVIIPAGVPRKP---GMT---RDDLFNINAG----IVKDLCSAIAKYCPNAIVNMISNP 147 (340)
Q Consensus 96 ~aDiVi~~ag~~~~~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNP 147 (340)
+.|++|+.+|..... ..+ -...+..|+. ..+.+.+.+.+. ..+.|+++|.-
T Consensus 78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv~isS~ 138 (273)
T PRK07825 78 PIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR-GRGHVVNVASL 138 (273)
T ss_pred CCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEcCc
Confidence 689999999864321 112 2234455665 344444554433 34567767643
No 352
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.19 Score=45.57 Aligned_cols=114 Identities=11% Similarity=0.112 Sum_probs=64.8
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCCc---cccc-------cC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GNDQ---LGQA-------LE 95 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l~ 95 (340)
+++.|+||+|.+|..++..|+..|. .|++.|.+. ......++.... .++.... +-+| .++. +.
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGA--NVVITGRTKEKLEEAKLEIEQFP--GQVLTVQMDVRNPEDVQKMVEQIDEKFG 77 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 4789999999999999999998887 899999875 222233333221 1222221 1122 1111 24
Q ss_pred CCCEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHH----HHhCCCcEEEEecC
Q 019519 96 DSDVVIIPAGVPRK-P--GMTR---DDLFNINAGIVKDLCSAI----AKYCPNAIVNMISN 146 (340)
Q Consensus 96 ~aDiVi~~ag~~~~-~--g~~r---~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tN 146 (340)
..|+||+.+|.... + ..+. ...+..|......+.+.+ .+....+.++++|.
T Consensus 78 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS 138 (252)
T PRK07677 78 RIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVA 138 (252)
T ss_pred CccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcC
Confidence 67999999875321 1 2222 234455555444444444 33334567777763
No 353
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=95.97 E-value=0.077 Score=47.95 Aligned_cols=112 Identities=20% Similarity=0.282 Sum_probs=63.9
Q ss_pred eEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCcc---ccc-------cCC
Q 019519 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQL---GQA-------LED 96 (340)
Q Consensus 30 KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~---~~a-------l~~ 96 (340)
++.|+||+|.+|..++..|+..+. ++++++.++. .....++.+.. .++.... +-+|. .++ +..
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~ 77 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDGF--AVAVADLNEETAKETAKEINQAG--GKAVAYKLDVSDKDQVFSAIDQAAEKFGG 77 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 689999999999999999998887 8999987652 22223333222 1222221 11221 111 235
Q ss_pred CCEEEEcCCCCCC-C--CCCHH---HHHHHHHH----HHHHHHHHHHHhCCCcEEEEec
Q 019519 97 SDVVIIPAGVPRK-P--GMTRD---DLFNINAG----IVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 97 aDiVi~~ag~~~~-~--g~~r~---~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t 145 (340)
.|+||+.+|.... + +.+.. ..+..|.. +++.+.+.+++...++.++++|
T Consensus 78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~s 136 (254)
T TIGR02415 78 FDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAA 136 (254)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 7999999986321 1 22332 23445544 3345555555555456666554
No 354
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=95.97 E-value=0.048 Score=52.18 Aligned_cols=66 Identities=18% Similarity=0.206 Sum_probs=45.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
+.+||+|||. |.+|.+++..|...++ +++..+.+..... +..... .+.. .+..+++++||+|+++.
T Consensus 16 ~gktIgIIG~-GsmG~AlA~~L~~sG~--~Vvv~~r~~~~s~--~~A~~~---G~~~----~s~~eaa~~ADVVvLaV 81 (330)
T PRK05479 16 KGKKVAIIGY-GSQGHAHALNLRDSGV--DVVVGLREGSKSW--KKAEAD---GFEV----LTVAEAAKWADVIMILL 81 (330)
T ss_pred CCCEEEEEee-HHHHHHHHHHHHHCCC--EEEEEECCchhhH--HHHHHC---CCee----CCHHHHHhcCCEEEEcC
Confidence 3569999998 9999999999998887 8888776542211 111111 1111 24568899999999985
No 355
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.97 E-value=0.009 Score=58.31 Aligned_cols=73 Identities=25% Similarity=0.301 Sum_probs=44.5
Q ss_pred EEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEe-c---CCccccccCCCCEEEEcCCC
Q 019519 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-G---NDQLGQALEDSDVVIIPAGV 106 (340)
Q Consensus 31 I~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~---~~d~~~al~~aDiVi~~ag~ 106 (340)
|.|+|+ |.+|+.++..|+......++++.|.+..+.. .+.......++.... + ..++.+.++++|+||.++|.
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~--~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp 77 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAE--RLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGP 77 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHH--HHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHH--HHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCcc
Confidence 789999 9999999999998876569999999862222 122110111222221 1 12355678999999999864
No 356
>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]
Probab=95.96 E-value=0.041 Score=51.01 Aligned_cols=96 Identities=16% Similarity=0.227 Sum_probs=63.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCC--cceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPL--VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~--~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
++||++||+ |++|+.++..|...+. ..+|...|.++.+.. ++.... .... ++|..++..++|+||++.-
T Consensus 1 ~~~IgfIG~-G~Mg~Ai~~gl~~~g~~~~~~I~v~~~~~e~~~--~l~~~~-g~~~-----~~~~~~~~~~advv~LavK 71 (266)
T COG0345 1 MMKIGFIGA-GNMGEAILSGLLKSGALPPEEIIVTNRSEEKRA--ALAAEY-GVVT-----TTDNQEAVEEADVVFLAVK 71 (266)
T ss_pred CceEEEEcc-CHHHHHHHHHHHhcCCCCcceEEEeCCCHHHHH--HHHHHc-CCcc-----cCcHHHHHhhCCEEEEEeC
Confidence 479999998 9999999999998872 358888887652221 233222 1111 2344688899999999861
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCC
Q 019519 106 VPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPV 148 (340)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~ 148 (340)
| ..+.+++..++...++..||-+.-.+
T Consensus 72 -P---------------q~~~~vl~~l~~~~~~~lvISiaAGv 98 (266)
T COG0345 72 -P---------------QDLEEVLSKLKPLTKDKLVISIAAGV 98 (266)
T ss_pred -h---------------HhHHHHHHHhhcccCCCEEEEEeCCC
Confidence 2 45566677777644566666555444
No 357
>PRK12747 short chain dehydrogenase; Provisional
Probab=95.95 E-value=0.33 Score=43.83 Aligned_cols=34 Identities=24% Similarity=0.246 Sum_probs=28.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIA 63 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~ 63 (340)
.+.+.|+||+|.+|.+++..|+..|. +|++.+..
T Consensus 4 ~k~~lItGas~gIG~~ia~~l~~~G~--~v~~~~~~ 37 (252)
T PRK12747 4 GKVALVTGASRGIGRAIAKRLANDGA--LVAIHYGN 37 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--eEEEEcCC
Confidence 35899999999999999999998887 78887543
No 358
>PRK07985 oxidoreductase; Provisional
Probab=95.94 E-value=0.48 Score=44.29 Aligned_cols=117 Identities=20% Similarity=0.161 Sum_probs=66.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc----HHHHHHHhcCCCCceEEEEe-cCCccc----------
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT----PGVAADVGHINTRSEVAGYM-GNDQLG---------- 91 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~----~~~~~dl~~~~~~~~v~~~~-~~~d~~---------- 91 (340)
+.+++.|+||+|.+|.+++..|+..|. +|++.+.++. +.....+.+.. .++.... +-+|.+
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~--~Vi~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~ 123 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA--DVAISYLPVEEEDAQDVKKIIEECG--RKAVLLPGDLSDEKFARSLVHEAH 123 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC--EEEEecCCcchhhHHHHHHHHHHcC--CeEEEEEccCCCHHHHHHHHHHHH
Confidence 346899999999999999999999887 8888876431 11111122211 1222211 112211
Q ss_pred cccCCCCEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecCC
Q 019519 92 QALEDSDVVIIPAGVPRK--P--GMTR---DDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNP 147 (340)
Q Consensus 92 ~al~~aDiVi~~ag~~~~--~--g~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP 147 (340)
+.+...|++|+.+|.... + ..+. ...+..|+.....+.+.+..+- ..+.||++|..
T Consensus 124 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~ 187 (294)
T PRK07985 124 KALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSI 187 (294)
T ss_pred HHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCc
Confidence 223467999999886321 1 2222 2345667765555555554432 34667776653
No 359
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=95.91 E-value=0.058 Score=50.01 Aligned_cols=68 Identities=19% Similarity=0.240 Sum_probs=43.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCC-CcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNP-LVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~-~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
||||+|||+ |.+|..++..+...+ .+.-+.++|.+... +.++.+.. . ...+ +|+++.+.++|+|++++
T Consensus 1 mmrIgIIG~-G~iG~~ia~~l~~~~~~~elv~v~d~~~~~--a~~~a~~~-~--~~~~---~~~~ell~~~DvVvi~a 69 (265)
T PRK13304 1 MLKIGIVGC-GAIASLITKAILSGRINAELYAFYDRNLEK--AENLASKT-G--AKAC---LSIDELVEDVDLVVECA 69 (265)
T ss_pred CCEEEEECc-cHHHHHHHHHHHcCCCCeEEEEEECCCHHH--HHHHHHhc-C--CeeE---CCHHHHhcCCCEEEEcC
Confidence 479999997 999999998887653 22235678876422 22222211 1 1222 35566668999999986
No 360
>PRK06139 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.1 Score=49.85 Aligned_cols=114 Identities=19% Similarity=0.128 Sum_probs=64.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCCc---cccc-------c
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GNDQ---LGQA-------L 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l 94 (340)
...|.|+||+|.+|..++..|+..|. +|++++.++ .+....++..... ++.... +-+| .+++ +
T Consensus 7 ~k~vlITGAs~GIG~aia~~la~~G~--~Vvl~~R~~~~l~~~~~~~~~~g~--~~~~~~~Dv~d~~~v~~~~~~~~~~~ 82 (330)
T PRK06139 7 GAVVVITGASSGIGQATAEAFARRGA--RLVLAARDEEALQAVAEECRALGA--EVLVVPTDVTDADQVKALATQAASFG 82 (330)
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCC--cEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 45899999999999999999999987 899999875 2233333433221 222111 1122 1122 2
Q ss_pred CCCCEEEEcCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHHHhCCCcEEEEecC
Q 019519 95 EDSDVVIIPAGVPRKP---GMT---RDDLFNINAGIV----KDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~---g~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN 146 (340)
...|++|..+|..... ..+ -...+..|.... +...+.+.+. ..+.+|+++.
T Consensus 83 g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~-~~g~iV~isS 143 (330)
T PRK06139 83 GRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ-GHGIFINMIS 143 (330)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc-CCCEEEEEcC
Confidence 4679999999864321 112 123344554433 3444444443 3456666653
No 361
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.91 E-value=0.23 Score=44.70 Aligned_cols=33 Identities=24% Similarity=0.380 Sum_probs=27.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDI 62 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~ 62 (340)
..+|.|+||+|++|++++..|+..+. ++++...
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~--~v~~~~~ 38 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGS--LVVVNAK 38 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeC
Confidence 46999999999999999999998887 6666543
No 362
>PRK08324 short chain dehydrogenase; Validated
Probab=95.91 E-value=0.069 Score=56.22 Aligned_cols=114 Identities=21% Similarity=0.271 Sum_probs=64.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCc---ccccc-------
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQ---LGQAL------- 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al------- 94 (340)
.++|.|+||+|.+|+.++..|+..|. +|+++|.+.. .....++... ..+.... +-+| ..+++
T Consensus 422 gk~vLVTGasggIG~~la~~L~~~Ga--~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~~~~ 496 (681)
T PRK08324 422 GKVALVTGAAGGIGKATAKRLAAEGA--CVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAALAF 496 (681)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCcC--EEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999998887 8999998762 2222233321 1122111 1122 12222
Q ss_pred CCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHH----HHHHHHHHhCCCcEEEEecC
Q 019519 95 EDSDVVIIPAGVPRKP---GMTR---DDLFNINAGIVK----DLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~---g~~r---~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tN 146 (340)
.+.|+||+++|..... ..+. ...+..|..... ...+.+++....+.+++++.
T Consensus 497 g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS 558 (681)
T PRK08324 497 GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIAS 558 (681)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECC
Confidence 3689999999864321 1222 122344544444 44555554433366666654
No 363
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.89 E-value=0.11 Score=48.47 Aligned_cols=121 Identities=18% Similarity=0.261 Sum_probs=79.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe----cCCccc-------cc
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM----GNDQLG-------QA 93 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~----~~~d~~-------~a 93 (340)
..+.|+|+||+.-+|.++|+.++..|. .++|+.... ++..+.++.......++.... +.++.+ .-
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~--~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA--KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRH 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC--ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence 457889999999999999999999987 778887654 333334554433211122211 111222 34
Q ss_pred cCCCCEEEEcCCCCCCCCC----C---HHHHHH----HHHHHHHHHHHHHHHhCCCcEEEEecCCCCcc
Q 019519 94 LEDSDVVIIPAGVPRKPGM----T---RDDLFN----INAGIVKDLCSAIAKYCPNAIVNMISNPVNST 151 (340)
Q Consensus 94 l~~aDiVi~~ag~~~~~g~----~---r~~~~~----~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~ 151 (340)
+.+.|+.|..||+.+ .+. + ....+. ..+-..+...+.+++.+ ++.|++++...+-+
T Consensus 89 fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~ 155 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKM 155 (282)
T ss_pred cCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEecccccc
Confidence 679999999999887 321 1 122223 45678888999999887 89988888777644
No 364
>PRK08339 short chain dehydrogenase; Provisional
Probab=95.88 E-value=0.31 Score=44.67 Aligned_cols=116 Identities=11% Similarity=0.163 Sum_probs=67.5
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCCc---ccccc------CC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GNDQ---LGQAL------ED 96 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al------~~ 96 (340)
..+.|+||+|.+|..++..|+..|. +|+++|.+. ......++.... ..++.... +-+| .++.+ ..
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 9 KLAFTTASSKGIGFGVARVLARAGA--DVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELKNIGE 85 (263)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence 4789999999999999999999887 899999875 222233333211 11222211 1112 22222 35
Q ss_pred CCEEEEcCCCCCCC---CCCHH---HHHHHH----HHHHHHHHHHHHHhCCCcEEEEecCCC
Q 019519 97 SDVVIIPAGVPRKP---GMTRD---DLFNIN----AGIVKDLCSAIAKYCPNAIVNMISNPV 148 (340)
Q Consensus 97 aDiVi~~ag~~~~~---g~~r~---~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tNP~ 148 (340)
.|++|+.+|.+... ..+.. ..+..| ....+.+.+.+++. ..+.||++|...
T Consensus 86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~-~~g~Ii~isS~~ 146 (263)
T PRK08339 86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERK-GFGRIIYSTSVA 146 (263)
T ss_pred CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEcCcc
Confidence 79999999865321 12222 223334 44567777777654 346677766543
No 365
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=95.88 E-value=0.024 Score=52.84 Aligned_cols=71 Identities=25% Similarity=0.260 Sum_probs=45.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhC-CCcceEE-EEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEc
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLN-PLVSRLA-LYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIP 103 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~-~~~~el~-L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ 103 (340)
|+++||+|||. |.+|..++..|... +- .+++ ++|.+... +.++....... ..+ +++++.+.++|+|+++
T Consensus 4 m~~irIGIIG~-G~IG~~~a~~L~~~~~~-~el~aV~dr~~~~--a~~~a~~~g~~--~~~---~~~eell~~~D~Vvi~ 74 (271)
T PRK13302 4 RPELRVAIAGL-GAIGKAIAQALDRGLPG-LTLSAVAVRDPQR--HADFIWGLRRP--PPV---VPLDQLATHADIVVEA 74 (271)
T ss_pred CCeeEEEEECc-cHHHHHHHHHHHhcCCC-eEEEEEECCCHHH--HHHHHHhcCCC--ccc---CCHHHHhcCCCEEEEC
Confidence 66789999997 99999999888763 22 2554 78876422 22222111001 111 3456777899999999
Q ss_pred CC
Q 019519 104 AG 105 (340)
Q Consensus 104 ag 105 (340)
+.
T Consensus 75 tp 76 (271)
T PRK13302 75 AP 76 (271)
T ss_pred CC
Confidence 74
No 366
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.88 E-value=0.12 Score=47.06 Aligned_cols=114 Identities=20% Similarity=0.259 Sum_probs=64.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc---HHHHHHHhcCCCCceEEEEe-cCCc---cccc-------
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PGVAADVGHINTRSEVAGYM-GNDQ---LGQA------- 93 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~-~~~d---~~~a------- 93 (340)
...+.|+||+|.+|++++..|+..+. ++++.|.++. .....++.+... ++.... +-+| ..++
T Consensus 8 ~k~~lVtG~s~gIG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~ 83 (254)
T PRK06114 8 GQVAFVTGAGSGIGQRIAIGLAQAGA--DVALFDLRTDDGLAETAEHIEAAGR--RAIQIAADVTSKADLRAAVARTEAE 83 (254)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhcCC--ceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45899999999999999999999887 8999997642 222333443221 222211 1112 1222
Q ss_pred cCCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHH----HHHHHHHHHhCCCcEEEEecC
Q 019519 94 LEDSDVVIIPAGVPRKP---GMTR---DDLFNINAGIV----KDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 94 l~~aDiVi~~ag~~~~~---g~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN 146 (340)
+..-|++|+.+|..... ..+. ...+..|+... +.+.+.+.+. ..+.++++|.
T Consensus 84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS 145 (254)
T PRK06114 84 LGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN-GGGSIVNIAS 145 (254)
T ss_pred cCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCcEEEEECc
Confidence 23459999999864321 1121 23344555544 4444444432 3456666654
No 367
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.87 E-value=0.051 Score=49.07 Aligned_cols=36 Identities=33% Similarity=0.362 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
+.+++.|+||+|.+|+.++..|+..+. +++++|.+.
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~--~v~~~~~~~ 42 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA--KVIGFDQAF 42 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecch
Confidence 346899999999999999999998887 899998764
No 368
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.86 E-value=0.058 Score=51.91 Aligned_cols=37 Identities=19% Similarity=0.423 Sum_probs=32.0
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
.+..||.|+|+ |.+|+.++..|+..|+ .+|.|+|.+.
T Consensus 22 L~~~~VlVvG~-GglGs~va~~La~aGv-g~i~lvD~D~ 58 (339)
T PRK07688 22 LREKHVLIIGA-GALGTANAEMLVRAGV-GKVTIVDRDY 58 (339)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCC-CeEEEEeCCc
Confidence 34569999998 9999999999998885 6999999873
No 369
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=95.86 E-value=0.036 Score=52.27 Aligned_cols=66 Identities=17% Similarity=0.168 Sum_probs=46.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC-cHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
..||+|+|+ |.+|..++..|...+. +|..+|.+. ....+.++ .. .... ..++.+.++++|+||.+.
T Consensus 152 g~kvlViG~-G~iG~~~a~~L~~~Ga--~V~v~~r~~~~~~~~~~~---G~--~~~~---~~~l~~~l~~aDiVI~t~ 218 (296)
T PRK08306 152 GSNVLVLGF-GRTGMTLARTLKALGA--NVTVGARKSAHLARITEM---GL--SPFH---LSELAEEVGKIDIIFNTI 218 (296)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHc---CC--eeec---HHHHHHHhCCCCEEEECC
Confidence 469999998 9999999999988775 999999875 22222221 11 1111 134567789999999985
No 370
>PRK06398 aldose dehydrogenase; Validated
Probab=95.85 E-value=0.056 Score=49.38 Aligned_cols=149 Identities=15% Similarity=0.166 Sum_probs=78.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEe-cCCccccc-------cCCCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-GNDQLGQA-------LEDSD 98 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~~~d~~~a-------l~~aD 98 (340)
+.+++.|+||+|.+|.+++..|+..|. +|+++|.++.... ... .+.... ...+.+++ +...|
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~--~Vi~~~r~~~~~~-----~~~---~~~~D~~~~~~i~~~~~~~~~~~~~id 74 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS--NVINFDIKEPSYN-----DVD---YFKVDVSNKEQVIKGIDYVISKYGRID 74 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCccccC-----ceE---EEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 346899999999999999999998887 8999987652110 000 011000 00111122 34689
Q ss_pred EEEEcCCCCCCC---CCCH---HHHHHHHHHHH----HHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHHHHhCCCCCC
Q 019519 99 VVIIPAGVPRKP---GMTR---DDLFNINAGIV----KDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEK 168 (340)
Q Consensus 99 iVi~~ag~~~~~---g~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~ 168 (340)
++|+.+|.+... ..+. ...+..|..-. +.+.+.+.+ ...+.+|++|.-.. ..+ .+..
T Consensus 75 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~isS~~~-----------~~~-~~~~ 141 (258)
T PRK06398 75 ILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLK-QDKGVIINIASVQS-----------FAV-TRNA 141 (258)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-cCCeEEEEeCcchh-----------ccC-CCCC
Confidence 999999864321 1222 23345565544 444444443 23466666654221 111 3333
Q ss_pred ceEeccchhHHHHHHHHHHHcCCCCCCCceeEE
Q 019519 169 KLFGVTTLDVVRAKTFYAGKANVNVAEVNVPVV 201 (340)
Q Consensus 169 kviG~~~ld~~R~~~~la~~l~v~~~~v~~~v~ 201 (340)
-.++.+......+-+.++..++ +. |++..+
T Consensus 142 ~~Y~~sKaal~~~~~~la~e~~--~~-i~vn~i 171 (258)
T PRK06398 142 AAYVTSKHAVLGLTRSIAVDYA--PT-IRCVAV 171 (258)
T ss_pred chhhhhHHHHHHHHHHHHHHhC--CC-CEEEEE
Confidence 4445432222335566666664 23 655444
No 371
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.83 E-value=0.032 Score=53.65 Aligned_cols=77 Identities=18% Similarity=0.378 Sum_probs=50.6
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC-----c----------------HHH--HHHHhcCCCCceEE
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-----T----------------PGV--AADVGHINTRSEVA 82 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~-----~----------------~~~--~~dl~~~~~~~~v~ 82 (340)
.+..||+|+|+ |.+|+.++..|+..|+ .+|.|+|.+. . +.. +..+.......+++
T Consensus 22 L~~~~VlIiG~-GglGs~va~~La~aGv-g~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~ 99 (338)
T PRK12475 22 IREKHVLIVGA-GALGAANAEALVRAGI-GKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV 99 (338)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence 34569999998 9999999999998885 6899999874 0 011 11222222223444
Q ss_pred EEecC---CccccccCCCCEEEEcC
Q 019519 83 GYMGN---DQLGQALEDSDVVIIPA 104 (340)
Q Consensus 83 ~~~~~---~d~~~al~~aDiVi~~a 104 (340)
..... .+.++.++++|+||.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~DlVid~~ 124 (338)
T PRK12475 100 PVVTDVTVEELEELVKEVDLIIDAT 124 (338)
T ss_pred EEeccCCHHHHHHHhcCCCEEEEcC
Confidence 43211 23456789999999985
No 372
>PRK12743 oxidoreductase; Provisional
Probab=95.82 E-value=0.33 Score=44.07 Aligned_cols=115 Identities=20% Similarity=0.185 Sum_probs=63.6
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC---cHHHHHHHhcCCCCceEEEEe-cCCccc---cc-------c
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN---TPGVAADVGHINTRSEVAGYM-GNDQLG---QA-------L 94 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~~~d~~---~a-------l 94 (340)
.+|.|+||+|.+|+.++..|+..|. +|++++... ......++.... .++.... +-+|.+ .+ +
T Consensus 3 k~vlItGas~giG~~~a~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 3 QVAIVTASDSGIGKACALLLAQQGF--DIGITWHSDEEGAKETAEEVRSHG--VRAEIRQLDLSDLPEGAQALDKLIQRL 78 (256)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4899999999999999999999887 888776433 122223333222 1222221 112211 11 2
Q ss_pred CCCCEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHH----HhCCCcEEEEecCC
Q 019519 95 EDSDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAIA----KYCPNAIVNMISNP 147 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~----~~~p~a~viv~tNP 147 (340)
...|+||+.+|..... +.+ -...+..|......+.+.+. +....+.+|++|.-
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~ 141 (256)
T PRK12743 79 GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSV 141 (256)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeec
Confidence 3579999998864321 112 12334555555555544433 33334667767653
No 373
>PRK08605 D-lactate dehydrogenase; Validated
Probab=95.79 E-value=0.031 Score=53.63 Aligned_cols=65 Identities=29% Similarity=0.396 Sum_probs=45.2
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
...++|+|||. |.+|+.++..|.. ++.-+|..+|....... .. .+.. .+++++++++||+|+++.
T Consensus 144 l~g~~VgIIG~-G~IG~~vA~~L~~-~~g~~V~~~d~~~~~~~----~~-----~~~~---~~~l~ell~~aDvIvl~l 208 (332)
T PRK08605 144 IKDLKVAVIGT-GRIGLAVAKIFAK-GYGSDVVAYDPFPNAKA----AT-----YVDY---KDTIEEAVEGADIVTLHM 208 (332)
T ss_pred eCCCEEEEECC-CHHHHHHHHHHHh-cCCCEEEEECCCccHhH----Hh-----hccc---cCCHHHHHHhCCEEEEeC
Confidence 35679999998 9999999998843 33338999997642211 10 1111 135678899999999985
No 374
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=95.78 E-value=0.53 Score=43.07 Aligned_cols=32 Identities=28% Similarity=0.336 Sum_probs=27.7
Q ss_pred eEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCC
Q 019519 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIA 63 (340)
Q Consensus 30 KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~ 63 (340)
.+.|+||+|.+|++++..|+..|. +|++.+.+
T Consensus 3 ~~lITGas~gIG~~~a~~l~~~G~--~V~~~~~~ 34 (267)
T TIGR02685 3 AAVVTGAAKRIGSSIAVALHQEGY--RVVLHYHR 34 (267)
T ss_pred EEEEeCCCCcHHHHHHHHHHhCCC--eEEEEcCC
Confidence 688999999999999999999887 88887543
No 375
>PLN03139 formate dehydrogenase; Provisional
Probab=95.78 E-value=0.048 Score=53.33 Aligned_cols=95 Identities=22% Similarity=0.228 Sum_probs=59.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
...++|+|+|. |.+|+.++..|..-+. +|..+|......... .+. .+... .++++.+++||+|++..
T Consensus 197 L~gktVGIVG~-G~IG~~vA~~L~afG~--~V~~~d~~~~~~~~~--~~~----g~~~~---~~l~ell~~sDvV~l~l- 263 (386)
T PLN03139 197 LEGKTVGTVGA-GRIGRLLLQRLKPFNC--NLLYHDRLKMDPELE--KET----GAKFE---EDLDAMLPKCDVVVINT- 263 (386)
T ss_pred CCCCEEEEEee-cHHHHHHHHHHHHCCC--EEEEECCCCcchhhH--hhc----Cceec---CCHHHHHhhCCEEEEeC-
Confidence 45679999998 9999999999986665 899999764211111 111 11211 35778899999999974
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 106 VPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
|.. ..+-.++- .+.+....|.+++||++
T Consensus 264 -Plt---------~~T~~li~--~~~l~~mk~ga~lIN~a 291 (386)
T PLN03139 264 -PLT---------EKTRGMFN--KERIAKMKKGVLIVNNA 291 (386)
T ss_pred -CCC---------HHHHHHhC--HHHHhhCCCCeEEEECC
Confidence 211 11222221 23444455788988875
No 376
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=95.78 E-value=0.16 Score=45.36 Aligned_cols=114 Identities=20% Similarity=0.220 Sum_probs=63.8
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc---HHHHHHHhcCCCCceEEEEe-cCCc---cccc-------c
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PGVAADVGHINTRSEVAGYM-GNDQ---LGQA-------L 94 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l 94 (340)
.+|.|+|++|.+|++++..|...+. .+++.|.++. ......+... ..++.... +-.| ..++ +
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGY--RVIATYFSGNDCAKDWFEEYGFT--EDQVRLKELDVTDTEECAEALAEIEEEE 78 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCcHHHHHHHHHHhhcc--CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4889999999999999999998886 8999988742 1111111111 11232221 1112 1111 2
Q ss_pred CCCCEEEEcCCCCCC---CCCC---HHHHHHHHHHHHHHH----HHHHHHhCCCcEEEEecCC
Q 019519 95 EDSDVVIIPAGVPRK---PGMT---RDDLFNINAGIVKDL----CSAIAKYCPNAIVNMISNP 147 (340)
Q Consensus 95 ~~aDiVi~~ag~~~~---~g~~---r~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~tNP 147 (340)
...|++|+.+|.... ...+ -...+..|+.....+ .+.+++. +.+.++++|..
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~iss~ 140 (245)
T PRK12824 79 GPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GYGRIINISSV 140 (245)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEECCh
Confidence 358999999886421 1122 223345566555444 4444433 34567767654
No 377
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.75 E-value=0.077 Score=47.71 Aligned_cols=35 Identities=29% Similarity=0.558 Sum_probs=31.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
..++.|+|++|.+|+.++..|+..+. .++++|.++
T Consensus 5 ~~~~lItG~~g~iG~~~a~~l~~~G~--~vi~~~r~~ 39 (253)
T PRK08217 5 DKVIVITGGAQGLGRAMAEYLAQKGA--KLALIDLNQ 39 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 45899999999999999999998886 899999875
No 378
>PRK08177 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.057 Score=48.14 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=30.9
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
+++.|+||+|.+|+.++..|+..|. +|+++|.+.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~--~V~~~~r~~ 35 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW--QVTATVRGP 35 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC--EEEEEeCCC
Confidence 4799999999999999999998887 899999876
No 379
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.73 E-value=0.14 Score=46.67 Aligned_cols=115 Identities=17% Similarity=0.158 Sum_probs=64.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCC-CcceEEEEeCCCc---HHHHHHHhcCCCCceEEEEe-cCCc---ccccc-----
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNP-LVSRLALYDIANT---PGVAADVGHINTRSEVAGYM-GNDQ---LGQAL----- 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~-~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al----- 94 (340)
.++|.|+||+|.+|.+++..|+..+ . .|++.+.++. .....++..... .++.... +-+| .++.+
T Consensus 8 ~~~vlItGas~giG~~la~~l~~~gg~--~V~~~~r~~~~~~~~~~~~l~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 8 PQTILLLGGTSEIGLAICERYLKNAPA--RVVLAALPDDPRRDAAVAQMKAAGA-SSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCC--eEEEEeCCcchhHHHHHHHHHhcCC-CceEEEEecCCChHHHHHHHHHHHh
Confidence 3589999999999999999988874 5 8999988752 222334433211 1222211 1112 11112
Q ss_pred -CCCCEEEEcCCCCCCCCC---CH---HHHHHHHHH----HHHHHHHHHHHhCCCcEEEEecC
Q 019519 95 -EDSDVVIIPAGVPRKPGM---TR---DDLFNINAG----IVKDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 95 -~~aDiVi~~ag~~~~~g~---~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN 146 (340)
.+.|++|..+|....... +. .+.+..|.. +.+.+.+.+.+... +.++++|.
T Consensus 85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~-~~iv~isS 146 (253)
T PRK07904 85 GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGF-GQIIAMSS 146 (253)
T ss_pred cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCC-ceEEEEec
Confidence 379999998876532211 11 123555554 33556666665543 45555553
No 380
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=95.73 E-value=0.043 Score=53.14 Aligned_cols=71 Identities=20% Similarity=0.272 Sum_probs=46.3
Q ss_pred CeEEEEcCCCChHHHHHHHHH-hCCC-cceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMK-LNPL-VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~-~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
+||+|+||+|.||+.+...|. +..+ ..+++++...+..+........ ...+... ++ .+++++.|+|++++|
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~~~--~~~v~~~---~~-~~~~~~vDivffa~g 73 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFGGT--TGTLQDA---FD-IDALKALDIIITCQG 73 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCCCC--cceEEcC---cc-cccccCCCEEEEcCC
Confidence 489999999999999998888 5554 4788999865422221111111 1133321 11 247899999999876
No 381
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=95.72 E-value=0.047 Score=50.61 Aligned_cols=33 Identities=12% Similarity=0.269 Sum_probs=29.5
Q ss_pred eEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 30 KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
||.|+||+|++|++++..|+..++ +|..+..+.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~--~V~~~~R~~ 33 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASV--PFLVASRSS 33 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCC--cEEEEeCCC
Confidence 589999999999999999998887 888888765
No 382
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.72 E-value=0.068 Score=48.36 Aligned_cols=37 Identities=32% Similarity=0.548 Sum_probs=31.7
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
.+..||+|+|+ |.+|+.++..|+..|. .++.|+|.+.
T Consensus 19 L~~~~VlivG~-GglGs~va~~La~~Gv-g~i~lvD~D~ 55 (228)
T cd00757 19 LKNARVLVVGA-GGLGSPAAEYLAAAGV-GKLGLVDDDV 55 (228)
T ss_pred HhCCcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCCE
Confidence 34569999997 9999999999998885 6999999764
No 383
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=95.71 E-value=0.35 Score=43.10 Aligned_cols=71 Identities=17% Similarity=0.221 Sum_probs=43.9
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEe-cCCc------cccccCCCCEEE
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-GNDQ------LGQALEDSDVVI 101 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~~~d------~~~al~~aDiVi 101 (340)
|+|+|+||+|.+|+.++..|+..+....+++.+.+.... ..+ .++.... +-+| +.+.+...|+||
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~----~~~----~~~~~~~~Dls~~~~~~~~~~~~~~id~li 72 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD----FQH----DNVQWHALDVTDEAEIKQLSEQFTQLDWLI 72 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc----ccc----CceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence 589999999999999999998875333666666543211 111 1222111 1111 122356889999
Q ss_pred EcCCCC
Q 019519 102 IPAGVP 107 (340)
Q Consensus 102 ~~ag~~ 107 (340)
+.+|..
T Consensus 73 ~~aG~~ 78 (235)
T PRK09009 73 NCVGML 78 (235)
T ss_pred ECCccc
Confidence 999875
No 384
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.71 E-value=0.23 Score=46.48 Aligned_cols=117 Identities=19% Similarity=0.345 Sum_probs=75.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCCc----------cccc
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GNDQ----------LGQA 93 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~d----------~~~a 93 (340)
....|.|+||++-+|..+|..++..+- .++|.|++. ....+..+.+.. ++..+. +-+| .++.
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~--~~vl~Din~~~~~etv~~~~~~g---~~~~y~cdis~~eei~~~a~~Vk~e 111 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGA--KLVLWDINKQGNEETVKEIRKIG---EAKAYTCDISDREEIYRLAKKVKKE 111 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCC--eEEEEeccccchHHHHHHHHhcC---ceeEEEecCCCHHHHHHHHHHHHHh
Confidence 456899999977899999999998886 899999997 344444444331 222222 1122 2345
Q ss_pred cCCCCEEEEcCCCC-CCCC--CCHHHH---HHH----HHHHHHHHHHHHHHhCCCcEEEEecCCCC
Q 019519 94 LEDSDVVIIPAGVP-RKPG--MTRDDL---FNI----NAGIVKDLCSAIAKYCPNAIVNMISNPVN 149 (340)
Q Consensus 94 l~~aDiVi~~ag~~-~~~g--~~r~~~---~~~----N~~i~~~i~~~i~~~~p~a~viv~tNP~d 149 (340)
..+.|++|..||+. -++- .++.++ +.- -..+++.+.+.|.+. .++.|+.++.-.+
T Consensus 112 ~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~-~~GHIV~IaS~aG 176 (300)
T KOG1201|consen 112 VGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN-NNGHIVTIASVAG 176 (300)
T ss_pred cCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc-CCceEEEehhhhc
Confidence 67999999999963 3332 233222 222 345788888998865 4677776654443
No 385
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=95.69 E-value=0.042 Score=52.55 Aligned_cols=70 Identities=13% Similarity=0.142 Sum_probs=48.5
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
.+++|||+ |..|...+..+.....+.+|.++|.+. .+..+.++.+. ...+... .|.++++++||+|+++-
T Consensus 129 ~~lgiiG~-G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~--g~~v~~~---~~~~eav~~aDiVitaT 200 (325)
T TIGR02371 129 SVLGIIGA-GRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDY--EVPVRAA---TDPREAVEGCDILVTTT 200 (325)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhh--CCcEEEe---CCHHHHhccCCEEEEec
Confidence 59999997 999987665555444578999999986 33334444432 2234433 46689999999999853
No 386
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=95.69 E-value=0.027 Score=51.70 Aligned_cols=120 Identities=21% Similarity=0.270 Sum_probs=77.5
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCC---------cceEEEEeCCCc--H------HHHHHHhcCCCCceEEEEecCCccc
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPL---------VSRLALYDIANT--P------GVAADVGHINTRSEVAGYMGNDQLG 91 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~---------~~el~L~D~~~~--~------~~~~dl~~~~~~~~v~~~~~~~d~~ 91 (340)
.||+|.|| |..|..++..|..... -..++++|..-. . .....+.+.... . . ...|+.
T Consensus 26 ~riv~~GA-GsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~~~~~~-~-~---~~~~L~ 99 (254)
T cd00762 26 HKVLFNGA-GAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLARFANP-E-R---ESGDLE 99 (254)
T ss_pred cEEEEECc-CHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHHHHcCc-c-c---ccCCHH
Confidence 59999998 9999999877765321 138999998641 1 111111111111 0 1 125788
Q ss_pred cccC--CCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCC---ccHHHHHHHHHHhCCCC
Q 019519 92 QALE--DSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVN---STVPIAAEVFKKAGTYN 166 (340)
Q Consensus 92 ~al~--~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d---~~t~~~~~~~~~sg~~~ 166 (340)
++++ ++|++|=+.+.| | -+.+++.+.|.++|++.+|+-.|||.. ....-+ ++.+ .
T Consensus 100 eav~~~kptvlIG~S~~~---g-----------~ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~tpe~a---~~~t---~ 159 (254)
T cd00762 100 DAVEAAKPDFLIGVSRVG---G-----------AFTPEVIRAXAEINERPVIFALSNPTSKAECTAEEA---YTAT---E 159 (254)
T ss_pred HHHHhhCCCEEEEeCCCC---C-----------CCCHHHHHHHhhcCCCCEEEECCCcCCccccCHHHH---Hhhc---C
Confidence 9999 999999877655 2 345678888889999999999999985 333322 4433 1
Q ss_pred CCceEecc
Q 019519 167 EKKLFGVT 174 (340)
Q Consensus 167 ~~kviG~~ 174 (340)
...+|+..
T Consensus 160 G~ai~AtG 167 (254)
T cd00762 160 GRAIFASG 167 (254)
T ss_pred CCEEEEEC
Confidence 24677773
No 387
>KOG0409 consensus Predicted dehydrogenase [General function prediction only]
Probab=95.68 E-value=0.035 Score=51.86 Aligned_cols=68 Identities=22% Similarity=0.383 Sum_probs=51.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVP 107 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~~ 107 (340)
.++|..||- |.+|++++..|+..++ .|+.||++. ....++.+... ++.. .+.+..++||+||...+.|
T Consensus 35 ~~~iGFIGL-G~MG~~M~~nLik~G~--kVtV~dr~~--~k~~~f~~~Ga--~v~~-----sPaeVae~sDvvitmv~~~ 102 (327)
T KOG0409|consen 35 KTRIGFIGL-GNMGSAMVSNLIKAGY--KVTVYDRTK--DKCKEFQEAGA--RVAN-----SPAEVAEDSDVVITMVPNP 102 (327)
T ss_pred cceeeEEee-ccchHHHHHHHHHcCC--EEEEEeCcH--HHHHHHHHhch--hhhC-----CHHHHHhhcCEEEEEcCCh
Confidence 579999998 9999999999999999 999999864 33345555442 3321 2467789999999976543
No 388
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.62 Score=42.30 Aligned_cols=115 Identities=16% Similarity=0.163 Sum_probs=64.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCccc------cccCCCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQLG------QALEDSD 98 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~~------~al~~aD 98 (340)
.+++.|+|++|.+|..++..|+..+. +|++.|.+.. .....++.... ..++.... +-+|.+ +.+...|
T Consensus 7 ~k~vlItG~~~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~g~id 83 (259)
T PRK06125 7 GKRVLITGASKGIGAAAAEAFAAEGC--HLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEAREQLAAEAGDID 83 (259)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence 46899999999999999999998887 8999998752 22222333211 11222211 111211 1245799
Q ss_pred EEEEcCCCCCC-C--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCcEEEEecC
Q 019519 99 VVIIPAGVPRK-P--GMTR---DDLFNINAG----IVKDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 99 iVi~~ag~~~~-~--g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN 146 (340)
++|+.+|.... + ..+. ...+..|+. +.+.+.+.+.+. ..+.++++|.
T Consensus 84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~iss 140 (259)
T PRK06125 84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR-GSGVIVNVIG 140 (259)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEecC
Confidence 99999986421 1 1222 223445555 444444555443 2356666654
No 389
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=95.64 E-value=0.035 Score=45.31 Aligned_cols=71 Identities=30% Similarity=0.376 Sum_probs=42.8
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHH---hcCCCCceEEEEecCCccccccCCCCEEEEc
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADV---GHINTRSEVAGYMGNDQLGQALEDSDVVIIP 103 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl---~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ 103 (340)
|||+|+|++|.+|+.++..+...+-..=+..+|.+.....-.|+ .... ...+.. ++|+++.++.+|+||-.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~-~~~~~v---~~~l~~~~~~~DVvIDf 74 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIG-PLGVPV---TDDLEELLEEADVVIDF 74 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSS-T-SSBE---BS-HHHHTTH-SEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcC-Cccccc---chhHHHhcccCCEEEEc
Confidence 69999998899999999988885432224566665411111122 2111 122222 25778889999988876
No 390
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.61 E-value=0.1 Score=46.64 Aligned_cols=35 Identities=20% Similarity=0.407 Sum_probs=31.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
..+|.|+||+|.+|+.++..|+..+. +|++.+.++
T Consensus 5 ~~~vlItGa~g~iG~~~a~~l~~~G~--~V~~~~r~~ 39 (238)
T PRK05786 5 GKKVAIIGVSEGLGYAVAYFALKEGA--QVCINSRNE 39 (238)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 35999999999999999999998887 899999875
No 391
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=95.60 E-value=0.34 Score=43.52 Aligned_cols=32 Identities=25% Similarity=0.372 Sum_probs=27.6
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDI 62 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~ 62 (340)
++|.|+||+|.+|+.++..|+..+. ++++.+.
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~--~v~~~~~ 34 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGW--SVGINYA 34 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeC
Confidence 5899999999999999999998886 7777654
No 392
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=95.59 E-value=0.049 Score=49.72 Aligned_cols=35 Identities=20% Similarity=0.334 Sum_probs=31.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
.+++.|+||+|.+|+.++..|+..|. +|+++|.++
T Consensus 6 ~k~vlVtGas~gIG~~ia~~l~~~G~--~V~~~~r~~ 40 (263)
T PRK06200 6 GQVALITGGGSGIGRALVERFLAEGA--RVAVLERSA 40 (263)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 45899999999999999999998887 899999875
No 393
>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional
Probab=95.58 E-value=0.11 Score=51.90 Aligned_cols=127 Identities=17% Similarity=0.295 Sum_probs=76.1
Q ss_pred CCeEEEEcCCCChHHH-HHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCC
Q 019519 28 DRKVAVLGAAGGIGQP-LALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~-~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~ 106 (340)
.+||.|+|. |..|.+ +|..|...|. +|...|.+... ...+|.... +..+.+. + .+.++++|+||...|+
T Consensus 7 ~~~v~viG~-G~sG~s~~a~~L~~~G~--~V~~~D~~~~~-~~~~l~~~g----i~~~~~~-~-~~~~~~~d~vv~spgi 76 (461)
T PRK00421 7 IKRIHFVGI-GGIGMSGLAEVLLNLGY--KVSGSDLKESA-VTQRLLELG----AIIFIGH-D-AENIKDADVVVYSSAI 76 (461)
T ss_pred CCEEEEEEE-chhhHHHHHHHHHhCCC--eEEEECCCCCh-HHHHHHHCC----CEEeCCC-C-HHHCCCCCEEEECCCC
Confidence 458999998 989988 7888888888 99999987532 122344322 2222121 2 3557899999999998
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCC--ccHHHHHHHHHHhCCCCC
Q 019519 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVN--STVPIAAEVFKKAGTYNE 167 (340)
Q Consensus 107 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d--~~t~~~~~~~~~sg~~~~ 167 (340)
|...-. ......++++++.+.-- +.+..++..+|-+|=..+ +.|.+++++++.+| +.+
T Consensus 77 ~~~~~~-~~~a~~~~i~i~~~~e~-~~~~~~~~~~I~ITGTnGKTTTt~ll~~iL~~~g-~~~ 136 (461)
T PRK00421 77 PDDNPE-LVAARELGIPVVRRAEM-LAELMRFRTSIAVAGTHGKTTTTSLLAHVLAEAG-LDP 136 (461)
T ss_pred CCCCHH-HHHHHHCCCcEEeHHHH-HHHHHccCcEEEEECCCCHHHHHHHHHHHHHhcC-CCC
Confidence 753221 11122345555543222 122222223555655554 67777777788777 433
No 394
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=95.58 E-value=0.058 Score=51.36 Aligned_cols=73 Identities=30% Similarity=0.401 Sum_probs=47.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCC-CcceEEEEeCCCcHHHH-HHHhcCCCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNP-LVSRLALYDIANTPGVA-ADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~-~~~el~L~D~~~~~~~~-~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
++||+|+||.|.||+.+...|.... .+.++.++=..+..|.. .+...-.. .+... ..| ...++++|+|++++|
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~f~~~~~--~v~~~--~~~-~~~~~~~Divf~~ag 75 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIEFGGKSI--GVPED--AAD-EFVFSDVDIVFFAAG 75 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCccccccCccc--cCccc--ccc-ccccccCCEEEEeCc
Confidence 4699999999999999999998844 56778887665433332 33332111 11110 022 245779999999986
No 395
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=95.57 E-value=0.067 Score=56.77 Aligned_cols=92 Identities=21% Similarity=0.329 Sum_probs=58.5
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcH-HHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP-GVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVP 107 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~-~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~~ 107 (340)
.||+|||+ |.+|..++..+...++..+|..+|.++.. ..+.++ .. ... ..+++.++++++|+||++...
T Consensus 4 ~~I~IIG~-G~mG~ala~~l~~~G~~~~V~~~d~~~~~~~~a~~~---g~--~~~---~~~~~~~~~~~aDvVilavp~- 73 (735)
T PRK14806 4 GRVVVIGL-GLIGGSFAKALRERGLAREVVAVDRRAKSLELAVSL---GV--IDR---GEEDLAEAVSGADVIVLAVPV- 73 (735)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCCEEEEEECChhHHHHHHHC---CC--CCc---ccCCHHHHhcCCCEEEECCCH-
Confidence 59999997 99999999999887754479999987622 222221 11 001 123556778999999998521
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEec
Q 019519 108 RKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMIS 145 (340)
Q Consensus 108 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t 145 (340)
..+.++++.+..+. ++.+++.++
T Consensus 74 ---------------~~~~~vl~~l~~~~~~~~ii~d~~ 97 (735)
T PRK14806 74 ---------------LAMEKVLADLKPLLSEHAIVTDVG 97 (735)
T ss_pred ---------------HHHHHHHHHHHHhcCCCcEEEEcC
Confidence 23455555665554 455554443
No 396
>PRK08291 ectoine utilization protein EutC; Validated
Probab=95.56 E-value=0.048 Score=52.24 Aligned_cols=71 Identities=17% Similarity=0.219 Sum_probs=48.3
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
++|+|+|+ |..|...+..+.....+.+|.++|.+. .+..+.++.+.. ...+..+ .|+++++++||+||.+-
T Consensus 133 ~~v~IiGa-G~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~-g~~v~~~---~d~~~al~~aDiVi~aT 205 (330)
T PRK08291 133 SRAAVIGA-GEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAEL-GIPVTVA---RDVHEAVAGADIIVTTT 205 (330)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhcc-CceEEEe---CCHHHHHccCCEEEEee
Confidence 59999998 988888777666433367999999875 333444443221 1233332 56788899999998864
No 397
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.24 Score=45.77 Aligned_cols=112 Identities=19% Similarity=0.221 Sum_probs=61.5
Q ss_pred eEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCc---cccc------cCCC
Q 019519 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQ---LGQA------LEDS 97 (340)
Q Consensus 30 KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d---~~~a------l~~a 97 (340)
.+.|+|| |.+|..++..|. .+. +|++.|.++. .....++.... .++.... +-+| .+++ +...
T Consensus 4 ~~lItGa-~gIG~~la~~l~-~G~--~Vv~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~i~~~~~~~~~~g~i 77 (275)
T PRK06940 4 VVVVIGA-GGIGQAIARRVG-AGK--KVLLADYNEENLEAAAKTLREAG--FDVSTQEVDVSSRESVKALAATAQTLGPV 77 (275)
T ss_pred EEEEECC-ChHHHHHHHHHh-CCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEeecCCHHHHHHHHHHHHhcCCC
Confidence 4556676 899999999885 565 8999998752 22223333221 1222211 1112 1111 2468
Q ss_pred CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecCCC
Q 019519 98 DVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPV 148 (340)
Q Consensus 98 DiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~ 148 (340)
|++|+.||.... ...-...+..|+.-...+.+.+..+- +.+.+++++...
T Consensus 78 d~li~nAG~~~~-~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~ 128 (275)
T PRK06940 78 TGLVHTAGVSPS-QASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS 128 (275)
T ss_pred CEEEECCCcCCc-hhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence 999999987521 23344556677766555555554431 234445555443
No 398
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.54 E-value=0.064 Score=52.05 Aligned_cols=72 Identities=21% Similarity=0.286 Sum_probs=43.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhC-CC-cceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLN-PL-VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~-~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
|+||+|+||+|.||..+...++.. .+ ..+++++.....-+...++... ...+.. ..| .+.++++|+|+++++
T Consensus 1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~~~f~g~--~~~v~~---~~~-~~~~~~~Divf~a~~ 74 (369)
T PRK06598 1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAAPSFGGK--EGTLQD---AFD-IDALKKLDIIITCQG 74 (369)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcccccCCC--cceEEe---cCC-hhHhcCCCEEEECCC
Confidence 479999999999999999755544 44 4678887654321111122211 112211 122 245789999999875
No 399
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=95.53 E-value=0.085 Score=47.79 Aligned_cols=97 Identities=23% Similarity=0.376 Sum_probs=60.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcc--eEEEEeCCC----cHH-----HHHHHhcCCCCceEEEEecCCccccccCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVS--RLALYDIAN----TPG-----VAADVGHINTRSEVAGYMGNDQLGQALED 96 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~--el~L~D~~~----~~~-----~~~dl~~~~~~~~v~~~~~~~d~~~al~~ 96 (340)
..||.|+|| |..|..++..|...|. + +|.++|.+. .+. ...++.+....... ..++.+++++
T Consensus 25 ~~rvlvlGA-GgAg~aiA~~L~~~G~-~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~~-----~~~l~~~l~~ 97 (226)
T cd05311 25 EVKIVINGA-GAAGIAIARLLLAAGA-KPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEKT-----GGTLKEALKG 97 (226)
T ss_pred CCEEEEECc-hHHHHHHHHHHHHcCc-CcceEEEEeCCCccccccchhhhHHHHHHHHHhccCcc-----cCCHHHHHhc
Confidence 359999998 9999999999987765 4 899999983 111 11222221100011 1245678899
Q ss_pred CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCC
Q 019519 97 SDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVN 149 (340)
Q Consensus 97 aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d 149 (340)
+|+||-+-+ +|+-. .+..+.| +++.+++..+||..
T Consensus 98 ~dvlIgaT~----~G~~~-----------~~~l~~m---~~~~ivf~lsnP~~ 132 (226)
T cd05311 98 ADVFIGVSR----PGVVK-----------KEMIKKM---AKDPIVFALANPVP 132 (226)
T ss_pred CCEEEeCCC----CCCCC-----------HHHHHhh---CCCCEEEEeCCCCC
Confidence 999999764 24311 1223333 46778878889974
No 400
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.52 E-value=0.087 Score=48.17 Aligned_cols=36 Identities=22% Similarity=0.457 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
+..||+|+|+ |.+|+.++..|+..|. .+|.|+|.+.
T Consensus 23 ~~~~VlvvG~-GglGs~va~~La~~Gv-g~i~lvD~D~ 58 (240)
T TIGR02355 23 KASRVLIVGL-GGLGCAASQYLAAAGV-GNLTLLDFDT 58 (240)
T ss_pred hCCcEEEECc-CHHHHHHHHHHHHcCC-CEEEEEeCCc
Confidence 3569999998 9999999999998885 6999999874
No 401
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=95.51 E-value=0.051 Score=47.90 Aligned_cols=83 Identities=20% Similarity=0.250 Sum_probs=52.7
Q ss_pred cCCCCCCCCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcH--HHHHHHhcCCCCceEEEEecCCccccccCC
Q 019519 19 RGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGYMGNDQLGQALED 96 (340)
Q Consensus 19 ~~~~~~~~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~--~~~~dl~~~~~~~~v~~~~~~~d~~~al~~ 96 (340)
..|..-.....+|+|||.+..||..++..|+..+. .+.++|++... .....+.|.... ... -+.++.+.++.
T Consensus 53 ~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~~A--tVti~~~~~~~~~~~~~~~~hs~t~--~~~--~~~~l~~~~~~ 126 (197)
T cd01079 53 ILPYGNRLYGKTITIINRSEVVGRPLAALLANDGA--RVYSVDINGIQVFTRGESIRHEKHH--VTD--EEAMTLDCLSQ 126 (197)
T ss_pred ccccCCCCCCCEEEEECCCccchHHHHHHHHHCCC--EEEEEecCccccccccccccccccc--ccc--hhhHHHHHhhh
Confidence 33333344567999999988999999999998875 89999976511 000011121110 000 00125577899
Q ss_pred CCEEEEcCCCC
Q 019519 97 SDVVIIPAGVP 107 (340)
Q Consensus 97 aDiVi~~ag~~ 107 (340)
||+||.+.|.|
T Consensus 127 ADIVIsAvG~~ 137 (197)
T cd01079 127 SDVVITGVPSP 137 (197)
T ss_pred CCEEEEccCCC
Confidence 99999999877
No 402
>PRK08223 hypothetical protein; Validated
Probab=95.49 E-value=0.057 Score=50.61 Aligned_cols=36 Identities=22% Similarity=0.406 Sum_probs=31.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
+..||.|+|+ |-+|+.++..|+..|+ .+|.|+|-+.
T Consensus 26 ~~s~VlIvG~-GGLGs~va~~LA~aGV-G~i~lvD~D~ 61 (287)
T PRK08223 26 RNSRVAIAGL-GGVGGIHLLTLARLGI-GKFTIADFDV 61 (287)
T ss_pred hcCCEEEECC-CHHHHHHHHHHHHhCC-CeEEEEeCCC
Confidence 4569999998 9999999999999886 6899999874
No 403
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=95.49 E-value=0.035 Score=52.85 Aligned_cols=68 Identities=19% Similarity=0.315 Sum_probs=45.6
Q ss_pred CeEEEEcCCCChHHHHHHHHHh-CCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEc
Q 019519 29 RKVAVLGAAGGIGQPLALLMKL-NPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIP 103 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~-~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ 103 (340)
.+++|+|+ |..+..-+..+.. .+ +.+|.++|.+. .+..+.++.+ . ...+... +|.++++++||+|+.+
T Consensus 129 ~~l~viGa-G~QA~~~~~a~~~~~~-i~~v~v~~r~~~~~~~~~~~~~~-~-~~~v~~~---~~~~~av~~aDii~ta 199 (313)
T PF02423_consen 129 RTLGVIGA-GVQARWHLRALAAVRP-IKEVRVYSRSPERAEAFAARLRD-L-GVPVVAV---DSAEEAVRGADIIVTA 199 (313)
T ss_dssp -EEEEE---SHHHHHHHHHHHHHS---SEEEEE-SSHHHHHHHHHHHHC-C-CTCEEEE---SSHHHHHTTSSEEEE-
T ss_pred ceEEEECC-CHHHHHHHHHHHHhCC-ceEEEEEccChhHHHHHHHhhcc-c-cccceec---cchhhhcccCCEEEEc
Confidence 48999998 9888766655544 45 78999999986 4556667777 2 3455543 5678999999999875
No 404
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=95.48 E-value=0.066 Score=53.15 Aligned_cols=70 Identities=24% Similarity=0.328 Sum_probs=44.8
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhc-CCCCceEEEEe-cCCccccc-cCCCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGH-INTRSEVAGYM-GNDQLGQA-LEDSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~-~~~~~~v~~~~-~~~d~~~a-l~~aDiVi~~a 104 (340)
|||.|+|+ |.+|.+++..|...+. +++++|.++... ..+.+ ... .-+.+.. ....++++ ++++|.||++.
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~--~v~vid~~~~~~--~~~~~~~~~-~~~~gd~~~~~~l~~~~~~~a~~vi~~~ 73 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENN--DVTVIDTDEERL--RRLQDRLDV-RTVVGNGSSPDVLREAGAEDADLLIAVT 73 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--cEEEEECCHHHH--HHHHhhcCE-EEEEeCCCCHHHHHHcCCCcCCEEEEec
Confidence 68999998 9999999999988887 899999875221 12221 111 0111110 11223344 78999999975
No 405
>PRK07775 short chain dehydrogenase; Provisional
Probab=95.47 E-value=0.35 Score=44.52 Aligned_cols=35 Identities=29% Similarity=0.315 Sum_probs=30.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
++.+.|+||+|.+|++++..|+..|. +|++.+.+.
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~--~V~~~~r~~ 44 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGF--PVALGARRV 44 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 45899999999999999999998887 888888754
No 406
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=95.47 E-value=0.064 Score=50.39 Aligned_cols=95 Identities=18% Similarity=0.222 Sum_probs=59.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVP 107 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~~ 107 (340)
..+|+|+|+ |.+|..++..|...+. +|.++|.+.... ........ ..+. ..++.+.++++|+||.+...+
T Consensus 151 gk~v~IiG~-G~iG~avA~~L~~~G~--~V~v~~R~~~~~--~~~~~~g~-~~~~----~~~l~~~l~~aDiVint~P~~ 220 (287)
T TIGR02853 151 GSNVMVLGF-GRTGMTIARTFSALGA--RVFVGARSSADL--ARITEMGL-IPFP----LNKLEEKVAEIDIVINTIPAL 220 (287)
T ss_pred CCEEEEEcC-hHHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHHCCC-eeec----HHHHHHHhccCCEEEECCChH
Confidence 469999998 9999999999988775 899999875211 11111111 1111 134567789999999985211
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEe-cCCCCc
Q 019519 108 RKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI-SNPVNS 150 (340)
Q Consensus 108 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~-tNP~d~ 150 (340)
++ + . +.+....|++++|.+ ++|-.+
T Consensus 221 ---------ii--~----~---~~l~~~k~~aliIDlas~Pg~t 246 (287)
T TIGR02853 221 ---------VL--T----A---DVLSKLPKHAVIIDLASKPGGT 246 (287)
T ss_pred ---------Hh--C----H---HHHhcCCCCeEEEEeCcCCCCC
Confidence 11 1 1 123334567888765 778664
No 407
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=95.46 E-value=0.1 Score=52.66 Aligned_cols=98 Identities=16% Similarity=0.203 Sum_probs=59.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcC----CCCceEEEEecCCccccccC---CCCE
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHI----NTRSEVAGYMGNDQLGQALE---DSDV 99 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~----~~~~~v~~~~~~~d~~~al~---~aDi 99 (340)
.+++|++||- |.+|++++..|+..|+ +|..+|+...+. .++.+. .. ..+... .+++++.+ .+|+
T Consensus 5 ~~~~IG~IGL-G~MG~~mA~nL~~~G~--~V~V~NRt~~k~--~~l~~~~~~~Ga-~~~~~a---~s~~e~v~~l~~~dv 75 (493)
T PLN02350 5 ALSRIGLAGL-AVMGQNLALNIAEKGF--PISVYNRTTSKV--DETVERAKKEGN-LPLYGF---KDPEDFVLSIQKPRS 75 (493)
T ss_pred CCCCEEEEee-HHHHHHHHHHHHhCCC--eEEEECCCHHHH--HHHHHhhhhcCC-cccccC---CCHHHHHhcCCCCCE
Confidence 3569999998 9999999999999998 999999865222 222221 11 112221 23444444 5999
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecCCC
Q 019519 100 VIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKY-CPNAIVNMISNPV 148 (340)
Q Consensus 100 Vi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP~ 148 (340)
||+... +-+.++++...+-.. .|..++|..||-.
T Consensus 76 Ii~~v~---------------~~~aV~~Vi~gl~~~l~~G~iiID~sT~~ 110 (493)
T PLN02350 76 VIILVK---------------AGAPVDQTIKALSEYMEPGDCIIDGGNEW 110 (493)
T ss_pred EEEECC---------------CcHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 999742 112233332333333 4667777776653
No 408
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=95.45 E-value=0.09 Score=50.07 Aligned_cols=65 Identities=15% Similarity=0.188 Sum_probs=43.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
.+||+|||+ |++|.+++..|...++ ++++.+....... ..+.... +.. .+..+++++||+|+++.
T Consensus 3 ~kkIgiIG~-G~mG~AiA~~L~~sG~--~Viv~~~~~~~~~-~~a~~~G----v~~----~s~~ea~~~ADiVvLaV 67 (314)
T TIGR00465 3 GKTVAIIGY-GSQGHAQALNLRDSGL--NVIVGLRKGGASW-KKATEDG----FKV----GTVEEAIPQADLIMNLL 67 (314)
T ss_pred cCEEEEEeE-cHHHHHHHHHHHHCCC--eEEEEECcChhhH-HHHHHCC----CEE----CCHHHHHhcCCEEEEeC
Confidence 469999998 9999999999998886 6666554331111 1111111 122 12457789999999985
No 409
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=95.44 E-value=0.1 Score=52.80 Aligned_cols=106 Identities=19% Similarity=0.245 Sum_probs=63.1
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC-cHHHHHHHhcCCCCceEEEEe-----------cCCcc--
Q 019519 25 SVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYM-----------GNDQL-- 90 (340)
Q Consensus 25 ~~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~-----------~~~d~-- 90 (340)
..++.||+|+|+ |.+|...+..+...|. +|+.+|.++ ...++..+.-.. ..+.... .+.++
T Consensus 162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA--~V~a~D~~~~rle~aeslGA~~--v~i~~~e~~~~~~gya~~~s~~~~~ 236 (509)
T PRK09424 162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGA--IVRAFDTRPEVAEQVESMGAEF--LELDFEEEGGSGDGYAKVMSEEFIK 236 (509)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHcCCeE--EEeccccccccccchhhhcchhHHH
Confidence 345679999998 9999998888887775 799999986 334444432110 0010000 00111
Q ss_pred ------ccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCC
Q 019519 91 ------GQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNP 147 (340)
Q Consensus 91 ------~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP 147 (340)
.+.++++|+||.++|.|.++.. .-+.++..+.+ .|.+.++.++-+
T Consensus 237 ~~~~~~~~~~~gaDVVIetag~pg~~aP---------~lit~~~v~~m---kpGgvIVdvg~~ 287 (509)
T PRK09424 237 AEMALFAEQAKEVDIIITTALIPGKPAP---------KLITAEMVASM---KPGSVIVDLAAE 287 (509)
T ss_pred HHHHHHHhccCCCCEEEECCCCCcccCc---------chHHHHHHHhc---CCCCEEEEEccC
Confidence 1224689999999998732111 01124444443 488888888765
No 410
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.43 E-value=0.049 Score=52.04 Aligned_cols=71 Identities=14% Similarity=0.268 Sum_probs=47.8
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
.+|+|+|+ |..|...+..+.....+.+|.++|.+. ....+.++.+.. ..++..+ .|+++++++||+|+++-
T Consensus 128 ~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~-~~~~~~~---~~~~~~~~~aDiVi~aT 200 (325)
T PRK08618 128 KTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKF-NTEIYVV---NSADEAIEEADIIVTVT 200 (325)
T ss_pred cEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhc-CCcEEEe---CCHHHHHhcCCEEEEcc
Confidence 58999998 999887766555444468999999886 233344443221 2233333 46678899999999864
No 411
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=95.41 E-value=0.19 Score=45.10 Aligned_cols=114 Identities=17% Similarity=0.176 Sum_probs=61.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeC-CCc--HHHHHHHhcCCCCceEEEEe-cCCcc---ccc-------
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDI-ANT--PGVAADVGHINTRSEVAGYM-GNDQL---GQA------- 93 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~-~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~---~~a------- 93 (340)
.+.+.|+||+|.+|..++..|+..+. ++++... +.. .....++..... ++.... +-+|. .++
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGF--KVVAGCGPNSPRRVKWLEDQKALGF--DFIASEGNVGDWDSTKAAFDKVKAE 78 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCC--EEEEEcCCChHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 34789999999999999999998886 6777543 221 122223322221 222111 11221 122
Q ss_pred cCCCCEEEEcCCCCCCC---CCC---HHHHHHHHHHHHH----HHHHHHHHhCCCcEEEEecC
Q 019519 94 LEDSDVVIIPAGVPRKP---GMT---RDDLFNINAGIVK----DLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 94 l~~aDiVi~~ag~~~~~---g~~---r~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tN 146 (340)
+...|+||+++|..... ..+ -...+..|..-.. .+.+.+.+. +.+.++++|.
T Consensus 79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS 140 (246)
T PRK12938 79 VGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER-GWGRIINISS 140 (246)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEEec
Confidence 24689999999875321 112 2334556665544 444444332 3345666654
No 412
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=95.41 E-value=0.094 Score=46.65 Aligned_cols=73 Identities=12% Similarity=0.154 Sum_probs=47.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~ 106 (340)
+..||.|||| |.||...+..|...+. +|++++.+.... ..++.+.. .+.......+ +..+.++|+||.+-+.
T Consensus 9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga--~V~VIs~~~~~~-l~~l~~~~---~i~~~~~~~~-~~~l~~adlViaaT~d 80 (202)
T PRK06718 9 SNKRVVIVGG-GKVAGRRAITLLKYGA--HIVVISPELTEN-LVKLVEEG---KIRWKQKEFE-PSDIVDAFLVIAATND 80 (202)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC--eEEEEcCCCCHH-HHHHHhCC---CEEEEecCCC-hhhcCCceEEEEcCCC
Confidence 4579999998 9999999998888875 899997543222 22333321 2222211111 3568999998887543
Q ss_pred C
Q 019519 107 P 107 (340)
Q Consensus 107 ~ 107 (340)
+
T Consensus 81 ~ 81 (202)
T PRK06718 81 P 81 (202)
T ss_pred H
Confidence 3
No 413
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=95.41 E-value=0.11 Score=45.92 Aligned_cols=35 Identities=26% Similarity=0.443 Sum_probs=30.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
..||+|+|+ |.+|+.++..|+..|+ .++.|+|-+.
T Consensus 19 ~s~VlviG~-gglGsevak~L~~~GV-g~i~lvD~d~ 53 (198)
T cd01485 19 SAKVLIIGA-GALGAEIAKNLVLAGI-DSITIVDHRL 53 (198)
T ss_pred hCcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEECCc
Confidence 469999998 8899999999999886 6899999763
No 414
>TIGR01082 murC UDP-N-acetylmuramate--alanine ligase. UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (murein tripeptide ligase) is described by TIGR01081.
Probab=95.40 E-value=0.11 Score=51.92 Aligned_cols=129 Identities=19% Similarity=0.309 Sum_probs=76.0
Q ss_pred eEEEEcCCCChHHH-HHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCCCC
Q 019519 30 KVAVLGAAGGIGQP-LALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPR 108 (340)
Q Consensus 30 KI~IiGaaG~VG~~-~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~~~ 108 (340)
+|-++|. |..|.+ +|..|...|+ ++...|..... ...+|+... +..+.+ .+ .+.++++|+||...|+|.
T Consensus 1 ~~~~iGi-ggsGm~~la~~L~~~G~--~v~~~D~~~~~-~~~~l~~~g----i~~~~g-~~-~~~~~~~d~vV~spgi~~ 70 (448)
T TIGR01082 1 KIHFVGI-GGIGMSGIAEILLNRGY--QVSGSDIAENA-TTKRLEALG----IPIYIG-HS-AENLDDADVVVVSAAIKD 70 (448)
T ss_pred CEEEEEE-CHHHHHHHHHHHHHCCC--eEEEECCCcch-HHHHHHHCc----CEEeCC-CC-HHHCCCCCEEEECCCCCC
Confidence 5789998 888887 8889998888 89999976532 223344322 222222 22 355788999999999875
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCC--ccHHHHHHHHHHhCCCCCCceE
Q 019519 109 KPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVN--STVPIAAEVFKKAGTYNEKKLF 171 (340)
Q Consensus 109 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d--~~t~~~~~~~~~sg~~~~~kvi 171 (340)
..-+ .......+++++.+.-- +.+...+..+|-+|=..+ +.|.+++.+++.+| +++.-++
T Consensus 71 ~~p~-~~~a~~~~i~v~~~~el-~~~~~~~~~~IaITGTnGKTTTt~ll~~iL~~~g-~~~~~~~ 132 (448)
T TIGR01082 71 DNPE-IVEAKERGIPVIRRAEM-LAELMRFRHSIAVAGTHGKTTTTAMIAVILKEAG-LDPTVVV 132 (448)
T ss_pred CCHH-HHHHHHcCCceEeHHHH-HHHHHhcCcEEEEECCCChHHHHHHHHHHHHHcC-CCCeEEE
Confidence 3221 11222345555544322 222222223555655544 67777777788777 5443333
No 415
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.39 E-value=0.2 Score=49.77 Aligned_cols=117 Identities=20% Similarity=0.226 Sum_probs=67.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEe-cCCccccc-------cCCCCE
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-GNDQLGQA-------LEDSDV 99 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~~~d~~~a-------l~~aDi 99 (340)
..++.|+||+|.+|..++..|+..+. +++++|.........++........+.... ...+.++. +...|+
T Consensus 210 g~~vlItGasggIG~~la~~l~~~Ga--~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 210 GKVALVTGAARGIGAAIAEVLARDGA--HVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 46899999999999999999998887 899998754221122222111001111111 00111111 235899
Q ss_pred EEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEecC
Q 019519 100 VIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (340)
Q Consensus 100 Vi~~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 146 (340)
||+.+|..... .++ ....+..|+.-...+.+.+... .+.+.++++|.
T Consensus 288 vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS 343 (450)
T PRK08261 288 VVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSS 343 (450)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECC
Confidence 99999865321 122 2234566777777777766542 24567777764
No 416
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.36 E-value=0.035 Score=53.26 Aligned_cols=71 Identities=23% Similarity=0.346 Sum_probs=45.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCC-cceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPL-VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
++||+|+||+|.+|..++..|...++ ..||..+-.++..+...++.. ..+... . .+ ..+++++|+||++.|
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g----~~i~v~-d-~~-~~~~~~vDvVf~A~g 72 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKG----KELKVE-D-LT-TFDFSGVDIALFSAG 72 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCC----ceeEEe-e-CC-HHHHcCCCEEEECCC
Confidence 47999999999999999988887653 347777755432233222221 123321 1 11 245689999999864
No 417
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=95.36 E-value=0.055 Score=51.18 Aligned_cols=70 Identities=16% Similarity=0.131 Sum_probs=49.8
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEc
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIP 103 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ 103 (340)
..++|+|+ |..|.+-+..+..-..+.+|.++|.+. +...+.++.+.. ..++... .+.++++++||+|+.+
T Consensus 118 ~~l~iiGa-G~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~-~~~v~~~---~~~~eav~~aDIV~ta 189 (301)
T PRK06407 118 ENFTIIGS-GFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEF-GVDIRPV---DNAEAALRDADTITSI 189 (301)
T ss_pred cEEEEECC-cHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhc-CCcEEEe---CCHHHHHhcCCEEEEe
Confidence 49999997 988887666665545578999999886 344455555422 2245543 4568999999999975
No 418
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=95.31 E-value=0.035 Score=53.51 Aligned_cols=72 Identities=18% Similarity=0.314 Sum_probs=45.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCC-cceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPL-VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
.++||+|+||+|.+|..+...|...++ ..++.++...+..+...+... ..+... ..+ .++++++|+||++.+
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~~----~~~~v~--~~~-~~~~~~~D~vf~a~p 78 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFEG----RDYTVE--ELT-EDSFDGVDIALFSAG 78 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeecC----ceeEEE--eCC-HHHHcCCCEEEECCC
Confidence 457999999999999999988877543 457777755432222222211 122221 122 256789999999865
No 419
>PRK06123 short chain dehydrogenase; Provisional
Probab=95.31 E-value=0.29 Score=43.94 Aligned_cols=115 Identities=17% Similarity=0.157 Sum_probs=62.0
Q ss_pred eEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc---HHHHHHHhcCCCCceEEEEe-cCCc---ccccc-------C
Q 019519 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PGVAADVGHINTRSEVAGYM-GNDQ---LGQAL-------E 95 (340)
Q Consensus 30 KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------~ 95 (340)
.+.|+||+|.+|++++..|+..+. .+++.+.+.. .....++..... ++.... +-+| +.+++ .
T Consensus 4 ~~lVtG~~~~iG~~~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06123 4 VMIITGASRGIGAATALLAAERGY--AVCLNYLRNRDAAEAVVQAIRRQGG--EALAVAADVADEADVLRLFEAVDRELG 79 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC--eEEEecCCCHHHHHHHHHHHHhCCC--cEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence 689999999999999999998886 7777775431 222222332211 111111 1112 22222 2
Q ss_pred CCCEEEEcCCCCCCC----CCCH---HHHHHHHHHHHHHHH----HHHHHhC--CCcEEEEecCCC
Q 019519 96 DSDVVIIPAGVPRKP----GMTR---DDLFNINAGIVKDLC----SAIAKYC--PNAIVNMISNPV 148 (340)
Q Consensus 96 ~aDiVi~~ag~~~~~----g~~r---~~~~~~N~~i~~~i~----~~i~~~~--p~a~viv~tNP~ 148 (340)
..|+||+++|..... ..+. ...+..|+.....+. +.+.+.. .++.++++|...
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~ 145 (248)
T PRK06123 80 RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMA 145 (248)
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchh
Confidence 679999999864321 1222 234556666544443 3333221 245666666543
No 420
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.28 E-value=0.15 Score=46.66 Aligned_cols=37 Identities=24% Similarity=0.445 Sum_probs=32.0
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
.+..||+|+|+ |.+|+.++..|+..|. .++.|+|.+.
T Consensus 30 L~~~~VliiG~-GglGs~va~~La~~Gv-g~i~lvD~D~ 66 (245)
T PRK05690 30 LKAARVLVVGL-GGLGCAASQYLAAAGV-GTLTLVDFDT 66 (245)
T ss_pred hcCCeEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCCE
Confidence 34569999998 9999999999998885 6999999874
No 421
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=95.27 E-value=0.082 Score=53.93 Aligned_cols=66 Identities=26% Similarity=0.387 Sum_probs=46.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
...++|+|+|. |.+|+.+|..+..-+. +|..||.......+.++. +... .++++.+++||+|++..
T Consensus 136 l~gktvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~~~~~g-------~~~~---~~l~ell~~aDvV~l~l 201 (525)
T TIGR01327 136 LYGKTLGVIGL-GRIGSIVAKRAKAFGM--KVLAYDPYISPERAEQLG-------VELV---DDLDELLARADFITVHT 201 (525)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCChhHHHhcC-------CEEc---CCHHHHHhhCCEEEEcc
Confidence 34579999998 9999999999886666 899999753222222211 1211 35678899999999975
No 422
>PLN02494 adenosylhomocysteinase
Probab=95.25 E-value=0.095 Score=52.36 Aligned_cols=90 Identities=24% Similarity=0.271 Sum_probs=60.1
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcH-HHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP-GVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVP 107 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~-~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~~ 107 (340)
.+|+|+|. |.+|..++..+...|. +|+.+|+++.+ ..+.+.. + .+ .+++++++++|+||.+.|..
T Consensus 255 KtVvViGy-G~IGr~vA~~aka~Ga--~VIV~e~dp~r~~eA~~~G---~--~v------v~leEal~~ADVVI~tTGt~ 320 (477)
T PLN02494 255 KVAVICGY-GDVGKGCAAAMKAAGA--RVIVTEIDPICALQALMEG---Y--QV------LTLEDVVSEADIFVTTTGNK 320 (477)
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhhHHHHhcC---C--ee------ccHHHHHhhCCEEEECCCCc
Confidence 59999998 9999999999887776 89999987632 2222111 1 11 12457789999999976532
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCC
Q 019519 108 RKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVN 149 (340)
Q Consensus 108 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d 149 (340)
.++. .+.+....+.+++++++-+.+
T Consensus 321 ---------------~vI~--~e~L~~MK~GAiLiNvGr~~~ 345 (477)
T PLN02494 321 ---------------DIIM--VDHMRKMKNNAIVCNIGHFDN 345 (477)
T ss_pred ---------------cchH--HHHHhcCCCCCEEEEcCCCCC
Confidence 1110 233444457899999988644
No 423
>PRK06484 short chain dehydrogenase; Validated
Probab=95.25 E-value=0.16 Score=51.27 Aligned_cols=156 Identities=19% Similarity=0.231 Sum_probs=83.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCcccccc-------CCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQLGQAL-------EDS 97 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~~~al-------~~a 97 (340)
.+++.|+||+|.+|..++..|+..+. +|++.|.++. +....++.... ..+.... ...+..+.+ ...
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAGD--RLLIIDRDAEGAKKLAEALGDEH--LSVQADITDEAAVESAFAQIQARWGRL 344 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCce--eEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999887 8999998752 22222221110 0111110 111122222 357
Q ss_pred CEEEEcCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCc
Q 019519 98 DVVIIPAGVPR--KP--GMT---RDDLFNINAGIVKDLCSAIAKY-CPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKK 169 (340)
Q Consensus 98 DiVi~~ag~~~--~~--g~~---r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~k 169 (340)
|++|+.||... .+ ..+ ....+..|+.-...+.+.+..+ ...+.||++|...... + .+..-
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~-~~~~~ 412 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLL-----------A-LPPRN 412 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcC-----------C-CCCCc
Confidence 99999998742 11 222 2334555666555555554433 2346777777644221 1 33333
Q ss_pred eEeccchhHHHHHHHHHHHcCCCCCCCceeEE
Q 019519 170 LFGVTTLDVVRAKTFYAGKANVNVAEVNVPVV 201 (340)
Q Consensus 170 viG~~~ld~~R~~~~la~~l~v~~~~v~~~v~ 201 (340)
.++.+.-....+-+.+++.++ +..|++..+
T Consensus 413 ~Y~asKaal~~l~~~la~e~~--~~gI~vn~v 442 (520)
T PRK06484 413 AYCASKAAVTMLSRSLACEWA--PAGIRVNTV 442 (520)
T ss_pred hhHHHHHHHHHHHHHHHHHhh--hhCeEEEEE
Confidence 444432222345556666653 344544433
No 424
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=95.24 E-value=0.029 Score=51.24 Aligned_cols=36 Identities=22% Similarity=0.309 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
+.+.+.|+||+|.+|..++..|+..+. ++++.|.++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~--~v~~~~~~~ 43 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA--NVVNADIHG 43 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCc
Confidence 346899999999999999999998887 899999865
No 425
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.22 E-value=0.54 Score=41.86 Aligned_cols=107 Identities=19% Similarity=0.192 Sum_probs=61.8
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEe-cCCc----cccccCCCCEEEEc
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-GNDQ----LGQALEDSDVVIIP 103 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~~~d----~~~al~~aDiVi~~ 103 (340)
+++.|+||+|.+|++++..|++.+. ++++.|.+.... .. .++.... +-+| ..+.+...|+||+.
T Consensus 6 k~~lVtGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~----~~-----~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ 74 (235)
T PRK06550 6 KTVLITGAASGIGLAQARAFLAQGA--QVYGVDKQDKPD----LS-----GNFHFLQLDLSDDLEPLFDWVPSVDILCNT 74 (235)
T ss_pred CEEEEcCCCchHHHHHHHHHHHCCC--EEEEEeCCcccc----cC-----CcEEEEECChHHHHHHHHHhhCCCCEEEEC
Confidence 5899999999999999999998887 899998764211 00 1122111 0011 11234578999999
Q ss_pred CCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCcEEEEecC
Q 019519 104 AGVPRK--P--GMTR---DDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (340)
Q Consensus 104 ag~~~~--~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 146 (340)
+|.... + ..+. ...+..|......+.+.+... .+.+.+++++.
T Consensus 75 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 127 (235)
T PRK06550 75 AGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCS 127 (235)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 986421 1 1222 234556665544444444322 23456665553
No 426
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.21 E-value=0.036 Score=53.30 Aligned_cols=72 Identities=18% Similarity=0.279 Sum_probs=44.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCC-CcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNP-LVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~-~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
+|+||+|+||+|.+|.-+.-.|...+ ...+|.++-..+..|..+.+.. . .+.... .+. .+++++|+|+++.+
T Consensus 3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~~--~--~l~~~~--~~~-~~~~~vD~vFla~p 75 (336)
T PRK05671 3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFAG--K--NLRVRE--VDS-FDFSQVQLAFFAAG 75 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccCC--c--ceEEee--CCh-HHhcCCCEEEEcCC
Confidence 35799999999999999998888644 2457777755442232222222 1 222211 121 34689999999753
No 427
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.21 E-value=0.19 Score=45.73 Aligned_cols=37 Identities=19% Similarity=0.183 Sum_probs=30.6
Q ss_pred CCCCeEEEEcCC--CChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 26 VPDRKVAVLGAA--GGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 26 ~~~~KI~IiGaa--G~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
++.+.+.|+||+ +.+|..++..|+..|. .|++.+.++
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~--~Vi~~~r~~ 43 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGA--TVIYTYQND 43 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCC--EEEEecCch
Confidence 344689999996 5899999999999887 899988764
No 428
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.20 E-value=0.062 Score=50.91 Aligned_cols=69 Identities=12% Similarity=0.080 Sum_probs=48.3
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
.+|+|+|+ |..|...+..+.....+.++.++|.+. ++..+.++.... ..+. . .+.++++.+||+||.+-
T Consensus 126 ~~v~IiGa-G~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~--~~~~-~---~~~~~av~~aDiVitaT 196 (304)
T PRK07340 126 GDLLLIGT-GVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALG--PTAE-P---LDGEAIPEAVDLVVTAT 196 (304)
T ss_pred CEEEEECC-cHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcC--CeeE-E---CCHHHHhhcCCEEEEcc
Confidence 59999998 999998888776533346999999986 344444454321 1232 1 45678899999999864
No 429
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=95.18 E-value=0.22 Score=51.92 Aligned_cols=137 Identities=14% Similarity=0.194 Sum_probs=82.2
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCcc----ccccCCCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQL----GQALEDSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~----~~al~~aDiVi~~a 104 (340)
.+|.|+|. |.+|+.++..|...+. +++++|.|+.. +..+.+... .-+.+. .+|. +..+++||.||++-
T Consensus 401 ~~vII~G~-Gr~G~~va~~L~~~g~--~vvvID~d~~~--v~~~~~~g~-~v~~GD--at~~~~L~~agi~~A~~vvv~~ 472 (621)
T PRK03562 401 PRVIIAGF-GRFGQIVGRLLLSSGV--KMTVLDHDPDH--IETLRKFGM-KVFYGD--ATRMDLLESAGAAKAEVLINAI 472 (621)
T ss_pred CcEEEEec-ChHHHHHHHHHHhCCC--CEEEEECCHHH--HHHHHhcCC-eEEEEe--CCCHHHHHhcCCCcCCEEEEEe
Confidence 69999998 9999999999988887 89999988632 222332221 123222 2232 13457999999985
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCccHHHHHHHHHHhCCCCCCceEeccchhHHHHHHH
Q 019519 105 GVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGVTTLDVVRAKTF 184 (340)
Q Consensus 105 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~sg~~~~~kviG~~~ld~~R~~~~ 184 (340)
..+ +.|. .++..+++..|+..++.-++...-.. .++..| .+.++--+...+.++.+.
T Consensus 473 ~d~-----------~~n~----~i~~~ar~~~p~~~iiaRa~d~~~~~-----~L~~~G---ad~v~~e~~e~sl~l~~~ 529 (621)
T PRK03562 473 DDP-----------QTSL----QLVELVKEHFPHLQIIARARDVDHYI-----RLRQAG---VEKPERETFEGALKSGRL 529 (621)
T ss_pred CCH-----------HHHH----HHHHHHHHhCCCCeEEEEECCHHHHH-----HHHHCC---CCEEehhhHhHHHHHHHH
Confidence 322 3443 45556666789877665444332221 134455 234543344445566666
Q ss_pred HHHHcCCCCCCC
Q 019519 185 YAGKANVNVAEV 196 (340)
Q Consensus 185 la~~l~v~~~~v 196 (340)
+-+.+|++++++
T Consensus 530 ~L~~lg~~~~~~ 541 (621)
T PRK03562 530 VLESLGLGPYEA 541 (621)
T ss_pred HHHHcCCCHHHH
Confidence 667888776554
No 430
>PRK06436 glycerate dehydrogenase; Provisional
Probab=95.13 E-value=0.1 Score=49.45 Aligned_cols=95 Identities=19% Similarity=0.326 Sum_probs=59.2
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 25 SVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 25 ~~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
.....+|+|+|- |.+|+.++..+..-|. +|..+|..... ... . ... .++++.+++||+|++..
T Consensus 119 ~L~gktvgIiG~-G~IG~~vA~~l~afG~--~V~~~~r~~~~--------~~~--~-~~~---~~l~ell~~aDiv~~~l 181 (303)
T PRK06436 119 LLYNKSLGILGY-GGIGRRVALLAKAFGM--NIYAYTRSYVN--------DGI--S-SIY---MEPEDIMKKSDFVLISL 181 (303)
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCCCcc--------cCc--c-ccc---CCHHHHHhhCCEEEECC
Confidence 345679999998 9999999987765566 99999965311 010 0 001 34678899999999975
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec--CCCC
Q 019519 105 GVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS--NPVN 149 (340)
Q Consensus 105 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NP~d 149 (340)
-.. + .+-.++- .+.+....|.+++|+++ .++|
T Consensus 182 p~t--~---------~T~~li~--~~~l~~mk~ga~lIN~sRG~~vd 215 (303)
T PRK06436 182 PLT--D---------ETRGMIN--SKMLSLFRKGLAIINVARADVVD 215 (303)
T ss_pred CCC--c---------hhhcCcC--HHHHhcCCCCeEEEECCCccccC
Confidence 221 1 1111111 23344445789999884 3444
No 431
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein. This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.
Probab=95.13 E-value=0.15 Score=48.44 Aligned_cols=66 Identities=17% Similarity=0.211 Sum_probs=44.5
Q ss_pred CeEEEEcCCCCh--------------------HHHHHHHHHhCCCcceEEEEeCCCc---HHHHHHHhcCCCCceEEEEe
Q 019519 29 RKVAVLGAAGGI--------------------GQPLALLMKLNPLVSRLALYDIANT---PGVAADVGHINTRSEVAGYM 85 (340)
Q Consensus 29 ~KI~IiGaaG~V--------------------G~~~a~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~ 85 (340)
|||+|-|| |+- |+.+|..|+..|+ +|+++|.+.. ......+.+... ...
T Consensus 1 ~~~~~~g~-gnq~ly~~~~~~~~~~gg~~p~gGspMArnLlkAGh--eV~V~Drnrsa~e~e~~e~LaeaGA----~~A- 72 (341)
T TIGR01724 1 MKVSVYGA-GNQKLYTDELNLPEKFGGEPPYGGSRMAIEFAMAGH--DVVLAEPNREFMSDDLWKKVEDAGV----KVV- 72 (341)
T ss_pred CeeEEecC-cchhHHHHHhCChhhcCCCCCCCHHHHHHHHHHCCC--EEEEEeCChhhhhhhhhHHHHHCCC----eec-
Confidence 68888887 742 5778888888888 9999998752 122233443331 111
Q ss_pred cCCccccccCCCCEEEEcC
Q 019519 86 GNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 86 ~~~d~~~al~~aDiVi~~a 104 (340)
++..++.++||+||++-
T Consensus 73 --aS~aEAAa~ADVVIL~L 89 (341)
T TIGR01724 73 --SDDKEAAKHGEIHVLFT 89 (341)
T ss_pred --CCHHHHHhCCCEEEEec
Confidence 34568899999999984
No 432
>PRK05599 hypothetical protein; Provisional
Probab=95.11 E-value=1.9 Score=38.96 Aligned_cols=116 Identities=13% Similarity=0.198 Sum_probs=64.1
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCCcc----------ccccC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GNDQL----------GQALE 95 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~d~----------~~al~ 95 (340)
|.+.|+||++.+|..++..|.+ +. .|++.+.++ .+..+.++..... ..+.... +-+|. .+.+.
T Consensus 1 ~~vlItGas~GIG~aia~~l~~-g~--~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 76 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLCH-GE--DVVLAARRPEAAQGLASDLRQRGA-TSVHVLSFDAQDLDTHRELVKQTQELAG 76 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHhC-CC--EEEEEeCCHHHHHHHHHHHHhccC-CceEEEEcccCCHHHHHHHHHHHHHhcC
Confidence 3588999989999999998884 54 899998765 3333444543221 1122111 11121 12234
Q ss_pred CCCEEEEcCCCCCCCC---CCH---HHHHHHH----HHHHHHHHHHHHHhCCCcEEEEecCCC
Q 019519 96 DSDVVIIPAGVPRKPG---MTR---DDLFNIN----AGIVKDLCSAIAKYCPNAIVNMISNPV 148 (340)
Q Consensus 96 ~aDiVi~~ag~~~~~g---~~r---~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tNP~ 148 (340)
.-|++|+.+|...... .+. .+....| ..+.+.+.+.+.+...++.|+++|.-.
T Consensus 77 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~ 139 (246)
T PRK05599 77 EISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIA 139 (246)
T ss_pred CCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 6899999988642211 111 1222223 233445556665544457777777544
No 433
>PRK07201 short chain dehydrogenase; Provisional
Probab=95.11 E-value=0.2 Score=52.11 Aligned_cols=115 Identities=15% Similarity=0.150 Sum_probs=65.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCCc---ccccc------
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GNDQ---LGQAL------ 94 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~d---~~~al------ 94 (340)
+.+++.|+||+|.+|..++..|+..|. +|++++.++ ......++.... .++.... +-+| .++++
T Consensus 370 ~~k~vlItGas~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~ 445 (657)
T PRK07201 370 VGKVVLITGASSGIGRATAIKVAEAGA--TVFLVARNGEALDELVAEIRAKG--GTAHAYTCDLTDSAAVDHTVKDILAE 445 (657)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHh
Confidence 456899999999999999999998887 899999875 222233333221 1222221 1122 22222
Q ss_pred -CCCCEEEEcCCCCCCCC----C----CHHHHHHHHHHHHH----HHHHHHHHhCCCcEEEEecC
Q 019519 95 -EDSDVVIIPAGVPRKPG----M----TRDDLFNINAGIVK----DLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 95 -~~aDiVi~~ag~~~~~g----~----~r~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tN 146 (340)
...|++|+.+|...... . +-...+..|..... .+.+.+++. ..+.+|++|.
T Consensus 446 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS 509 (657)
T PRK07201 446 HGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER-RFGHVVNVSS 509 (657)
T ss_pred cCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCEEEEECC
Confidence 26899999998642211 1 12233455655444 444444433 3456666654
No 434
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=95.10 E-value=0.045 Score=52.83 Aligned_cols=73 Identities=26% Similarity=0.312 Sum_probs=42.6
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEE-EEeCCCcHHHHHH--HhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLA-LYDIANTPGVAAD--VGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~-L~D~~~~~~~~~d--l~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
+||+|+||+|.+|..++..|...+.+ +++ +++.++..+.... ..+......+... ..|.++.++++|+|+++.
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~-el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~DvVf~al 76 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEV-EITYLVSSRESAGKPVSEVHPHLRGLVDLNLE--PIDEEEIAEDADVVFLAL 76 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCc-eEEEEeccchhcCCChHHhCccccccCCceee--cCCHHHhhcCCCEEEECC
Confidence 58999999999999999888866533 666 7676542222111 1111110011111 123334446899999975
No 435
>PRK06141 ornithine cyclodeaminase; Validated
Probab=95.08 E-value=0.088 Score=50.07 Aligned_cols=71 Identities=15% Similarity=0.254 Sum_probs=47.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
..+|+|||+ |.+|...+..+.....+.+|.++|... ....+.++.+.. ..+... .+.++++++||+|+.+-
T Consensus 125 ~~~v~iiG~-G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g--~~~~~~---~~~~~av~~aDIVi~aT 197 (314)
T PRK06141 125 ASRLLVVGT-GRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQG--FDAEVV---TDLEAAVRQADIISCAT 197 (314)
T ss_pred CceEEEECC-cHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcC--CceEEe---CCHHHHHhcCCEEEEee
Confidence 359999997 999998876555422356999999875 334444444321 124432 45678899999996653
No 436
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=95.01 E-value=0.082 Score=50.57 Aligned_cols=71 Identities=14% Similarity=0.209 Sum_probs=48.8
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
.+++|+|+ |..|...+..+.....+.+|.+++.+. ++..+.++.+.. ..++... .++++++++||+|+.+-
T Consensus 130 ~~v~iiGa-G~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~-g~~v~~~---~~~~~av~~aDiVvtaT 202 (326)
T TIGR02992 130 SVVAIFGA-GMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLL-GIDVTAA---TDPRAAMSGADIIVTTT 202 (326)
T ss_pred cEEEEECC-CHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhc-CceEEEe---CCHHHHhccCCEEEEec
Confidence 48999998 999988877776433467999999876 334444443221 1233332 46778899999999864
No 437
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=94.98 E-value=0.097 Score=51.82 Aligned_cols=102 Identities=19% Similarity=0.305 Sum_probs=62.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcH--HHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~--~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
..+|+|+|+ |.+|..++..|...|. .+|+++|.+..+ ..+.++.. .... ..++.+++.++|+||.+.+
T Consensus 180 ~~~VlViGa-G~iG~~~a~~L~~~G~-~~V~v~~rs~~ra~~la~~~g~-----~~i~---~~~l~~~l~~aDvVi~aT~ 249 (417)
T TIGR01035 180 GKKALLIGA-GEMGELVAKHLLRKGV-GKILIANRTYERAEDLAKELGG-----EAVK---FEDLEEYLAEADIVISSTG 249 (417)
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHcCC-----eEee---HHHHHHHHhhCCEEEECCC
Confidence 469999998 9999999998887662 489999987522 22222221 1111 1356688899999999866
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEecCCCCccH
Q 019519 106 VPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNSTV 152 (340)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t 152 (340)
.|..- .+ .+..+...... ...+++-+++|-|+=.
T Consensus 250 s~~~i-i~------------~e~l~~~~~~~~~~~~viDla~Prdid~ 284 (417)
T TIGR01035 250 APHPI-VS------------KEDVERALRERTRPLFIIDIAVPRDVDP 284 (417)
T ss_pred CCCce-Ec------------HHHHHHHHhcCCCCeEEEEeCCCCCCCh
Confidence 54211 11 11111111111 2458888999987654
No 438
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=94.96 E-value=0.038 Score=53.20 Aligned_cols=71 Identities=23% Similarity=0.376 Sum_probs=46.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCC-C-cceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNP-L-VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~-~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
.+||+|+||+|.+|..+...|...+ + +.+|.++...+..|....+... .+.... .| .+.++++|+|+++++
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~~----~l~v~~--~~-~~~~~~~Divf~a~~ 77 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKGR----EIIIQE--AK-INSFEGVDIAFFSAG 77 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCCc----ceEEEe--CC-HHHhcCCCEEEECCC
Confidence 4799999999999999999888544 3 4568888765433333222211 222221 23 245789999999764
No 439
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=94.94 E-value=0.11 Score=52.91 Aligned_cols=65 Identities=23% Similarity=0.356 Sum_probs=46.6
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
...++|+|+|. |.+|+.++..+..-+. +|+.||.........++ . +... ++++.+++||+|++..
T Consensus 138 l~gktvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~~~~~---g----~~~~----~l~ell~~aDiV~l~l 202 (526)
T PRK13581 138 LYGKTLGIIGL-GRIGSEVAKRAKAFGM--KVIAYDPYISPERAAQL---G----VELV----SLDELLARADFITLHT 202 (526)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCChhHHHhc---C----CEEE----cHHHHHhhCCEEEEcc
Confidence 35679999998 9999999999987666 99999975422222111 1 2221 3578899999999975
No 440
>PRK07589 ornithine cyclodeaminase; Validated
Probab=94.92 E-value=0.086 Score=50.87 Aligned_cols=70 Identities=23% Similarity=0.358 Sum_probs=49.0
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
.+++|||+ |..+..-+..+..-..+.+|.++|.+. ....+.++.+.. .++... ++.++++++||+|+.+-
T Consensus 130 ~~l~iiGa-G~QA~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~~--~~v~~~---~~~~~av~~ADIIvtaT 201 (346)
T PRK07589 130 RTMALIGN-GAQSEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGPG--LRIVAC---RSVAEAVEGADIITTVT 201 (346)
T ss_pred cEEEEECC-cHHHHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhcC--CcEEEe---CCHHHHHhcCCEEEEec
Confidence 58999997 988876665454433568999999886 344555555421 234432 46789999999999854
No 441
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=94.89 E-value=0.062 Score=52.56 Aligned_cols=75 Identities=16% Similarity=0.234 Sum_probs=44.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCC-CceEEEEecCCccccccCCCCEEEEcC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINT-RSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~-~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
.++||+|+||+|.+|..+...|...+. .||.++..++..+....-.+... ...+.... ..+ .+.++++|+|+++.
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~-~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~-~~~-~~~~~~~DvVf~Al 112 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPD-FEITVMTADRKAGQSFGSVFPHLITQDLPNLV-AVK-DADFSDVDAVFCCL 112 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCC-CeEEEEEChhhcCCCchhhCccccCcccccee-cCC-HHHhcCCCEEEEcC
Confidence 457999999999999999998887753 48888876432222111111100 00111010 112 13378999999975
No 442
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=94.88 E-value=0.13 Score=45.55 Aligned_cols=39 Identities=31% Similarity=0.420 Sum_probs=33.2
Q ss_pred CCCCCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 23 SESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 23 ~~~~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
+.+++.++|+|+|. |.+|++++..|...|. +|+.+|.++
T Consensus 23 ~~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~--~Vvv~D~~~ 61 (200)
T cd01075 23 TDSLEGKTVAVQGL-GKVGYKLAEHLLEEGA--KLIVADINE 61 (200)
T ss_pred CCCCCCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEcCCH
Confidence 34445679999998 9999999999998887 999999875
No 443
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=94.88 E-value=0.1 Score=44.75 Aligned_cols=56 Identities=25% Similarity=0.468 Sum_probs=40.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~ 106 (340)
+.+||+|+|.++.||..++..|...+. .+.+++.. +.|+++.++.||+||.++|.
T Consensus 35 ~Gk~v~VvGrs~~VG~Pla~lL~~~~a--tVt~~h~~-----------------------T~~l~~~~~~ADIVVsa~G~ 89 (160)
T PF02882_consen 35 EGKKVVVVGRSNIVGKPLAMLLLNKGA--TVTICHSK-----------------------TKNLQEITRRADIVVSAVGK 89 (160)
T ss_dssp TT-EEEEE-TTTTTHHHHHHHHHHTT---EEEEE-TT-----------------------SSSHHHHHTTSSEEEE-SSS
T ss_pred CCCEEEEECCcCCCChHHHHHHHhCCC--eEEeccCC-----------------------CCcccceeeeccEEeeeecc
Confidence 446999999977999999999998875 66666532 13456778999999999987
Q ss_pred C
Q 019519 107 P 107 (340)
Q Consensus 107 ~ 107 (340)
|
T Consensus 90 ~ 90 (160)
T PF02882_consen 90 P 90 (160)
T ss_dssp T
T ss_pred c
Confidence 6
No 444
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=94.88 E-value=0.75 Score=41.04 Aligned_cols=114 Identities=13% Similarity=0.143 Sum_probs=63.4
Q ss_pred EEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC---cHHHHHHHhcCCCCceEEEEe-cCCcc---ccc-------cCC
Q 019519 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN---TPGVAADVGHINTRSEVAGYM-GNDQL---GQA-------LED 96 (340)
Q Consensus 31 I~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~~~d~---~~a-------l~~ 96 (340)
|.|+||+|.+|..++..|+..+. ++++++... ......++.+.. .++..+. +-+|. .++ +..
T Consensus 1 vlItGas~giG~~~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 76 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGF--EICVHYHSGRSDAESVVSAIQAQG--GNARLLQFDVADRVACRTLLEADIAEHGA 76 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHHcC--CeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 57999999999999999998887 788887543 122233343322 1232221 11121 111 234
Q ss_pred CCEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----HHhCCCcEEEEecCCC
Q 019519 97 SDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAI----AKYCPNAIVNMISNPV 148 (340)
Q Consensus 97 aDiVi~~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNP~ 148 (340)
.|.+|..+|..... ..+ ....+..|......+.+.+ .+..+.+.++++|...
T Consensus 77 i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~ 138 (239)
T TIGR01831 77 YYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVS 138 (239)
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchh
Confidence 68999988864322 122 2334566666555554432 2223456677676544
No 445
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=94.87 E-value=0.23 Score=42.32 Aligned_cols=68 Identities=10% Similarity=0.104 Sum_probs=44.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
.+..||.|+|| |.||...+..|...+. +|++++.+.... ..++. .+......-+ ++.++++|+||.+-
T Consensus 11 l~~~~vlVvGG-G~va~rka~~Ll~~ga--~V~VIsp~~~~~-l~~l~------~i~~~~~~~~-~~dl~~a~lViaaT 78 (157)
T PRK06719 11 LHNKVVVIIGG-GKIAYRKASGLKDTGA--FVTVVSPEICKE-MKELP------YITWKQKTFS-NDDIKDAHLIYAAT 78 (157)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEcCccCHH-HHhcc------CcEEEecccC-hhcCCCceEEEECC
Confidence 34579999998 9999999999998887 899997432222 12221 1111111111 35689999999874
No 446
>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.86 E-value=0.65 Score=46.98 Aligned_cols=130 Identities=18% Similarity=0.169 Sum_probs=73.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVP 107 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~~ 107 (340)
..||.|+|. |..|.+++..|...|. ++...|.+.......+|..... .+....+..+ .+.+.++|+||...|+|
T Consensus 7 ~~~i~v~G~-G~sG~s~a~~L~~~G~--~v~~~D~~~~~~~~~~L~~~~~--~~~~~~g~~~-~~~~~~~d~vv~sp~I~ 80 (498)
T PRK02006 7 GPMVLVLGL-GESGLAMARWCARHGA--RLRVADTREAPPNLAALRAELP--DAEFVGGPFD-PALLDGVDLVALSPGLS 80 (498)
T ss_pred CCEEEEEee-cHhHHHHHHHHHHCCC--EEEEEcCCCCchhHHHHHhhcC--CcEEEeCCCc-hhHhcCCCEEEECCCCC
Confidence 458999998 9999998888888887 8999997652211123443321 1222222122 35678999999998887
Q ss_pred CCCCC--CHHHH-HHHHHHHHHH---HHHHHHHhC-C--CcEEEEecCCCC--ccHHHHHHHHHHhC
Q 019519 108 RKPGM--TRDDL-FNINAGIVKD---LCSAIAKYC-P--NAIVNMISNPVN--STVPIAAEVFKKAG 163 (340)
Q Consensus 108 ~~~g~--~r~~~-~~~N~~i~~~---i~~~i~~~~-p--~a~viv~tNP~d--~~t~~~~~~~~~sg 163 (340)
...-. .-... -..|++++.+ +++.++..+ + ...+|-+|=..+ +.|.+++.+++..|
T Consensus 81 ~~~~~~~~~~~~a~~~~i~v~~~~e~~~~~~~~l~~~~~~~~~I~VTGTnGKTTTt~ml~~iL~~~g 147 (498)
T PRK02006 81 PLEAALAPLVAAARERGIPVWGEIELFAQALAALGASGYAPKVLAITGTNGKTTTTALTGLLCERAG 147 (498)
T ss_pred CcccccCHHHHHHHHCCCcEEEHHHHHHHHHhhhccccCCCCEEEEECCCcHHHHHHHHHHHHHHcC
Confidence 54211 11111 1234444322 122222211 1 113555655554 67777777787776
No 447
>PRK08017 oxidoreductase; Provisional
Probab=94.86 E-value=0.19 Score=45.45 Aligned_cols=34 Identities=26% Similarity=0.300 Sum_probs=29.9
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
.+|.|+||+|.+|++++..|+..+. ++++++.+.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~--~v~~~~r~~ 36 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY--RVLAACRKP 36 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 3799999999999999999998887 888888764
No 448
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.85 E-value=0.074 Score=50.14 Aligned_cols=56 Identities=18% Similarity=0.370 Sum_probs=45.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~ 106 (340)
...+|+|||.+|.||..++..|...+. ++.+++... .++.+..++||+||.+.|.
T Consensus 158 ~Gk~V~vIG~s~ivG~PmA~~L~~~ga--tVtv~~~~t-----------------------~~l~e~~~~ADIVIsavg~ 212 (301)
T PRK14194 158 TGKHAVVIGRSNIVGKPMAALLLQAHC--SVTVVHSRS-----------------------TDAKALCRQADIVVAAVGR 212 (301)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCC--EEEEECCCC-----------------------CCHHHHHhcCCEEEEecCC
Confidence 457999999966999999999998887 888886431 1356778999999999876
Q ss_pred C
Q 019519 107 P 107 (340)
Q Consensus 107 ~ 107 (340)
|
T Consensus 213 ~ 213 (301)
T PRK14194 213 P 213 (301)
T ss_pred h
Confidence 6
No 449
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=94.85 E-value=0.25 Score=43.70 Aligned_cols=36 Identities=19% Similarity=0.404 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
+..||+|+|+ |.+|+.++..|+..|. .+|.++|.+.
T Consensus 20 ~~s~VlIiG~-gglG~evak~La~~GV-g~i~lvD~d~ 55 (197)
T cd01492 20 RSARILLIGL-KGLGAEIAKNLVLSGI-GSLTILDDRT 55 (197)
T ss_pred HhCcEEEEcC-CHHHHHHHHHHHHcCC-CEEEEEECCc
Confidence 3469999998 8899999999999885 6899999874
No 450
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=94.84 E-value=0.17 Score=49.87 Aligned_cols=89 Identities=21% Similarity=0.286 Sum_probs=59.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc-HHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT-PGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~ 106 (340)
..+|+|+|+ |.+|..++..+...|. +++.+|+++. ...+..+. + ... +.+++++++|+||.+.|.
T Consensus 202 GktVvViG~-G~IG~~va~~ak~~Ga--~ViV~d~d~~R~~~A~~~G---~--~~~------~~~e~v~~aDVVI~atG~ 267 (413)
T cd00401 202 GKVAVVAGY-GDVGKGCAQSLRGQGA--RVIVTEVDPICALQAAMEG---Y--EVM------TMEEAVKEGDIFVTTTGN 267 (413)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEECChhhHHHHHhcC---C--EEc------cHHHHHcCCCEEEECCCC
Confidence 469999998 9999999998888776 7888998863 22222211 1 111 234678999999998653
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCC
Q 019519 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNP 147 (340)
Q Consensus 107 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP 147 (340)
+ .++.. ..++...+.+++++++.+
T Consensus 268 ~---------------~~i~~--~~l~~mk~GgilvnvG~~ 291 (413)
T cd00401 268 K---------------DIITG--EHFEQMKDGAIVCNIGHF 291 (413)
T ss_pred H---------------HHHHH--HHHhcCCCCcEEEEeCCC
Confidence 2 12221 123334578899999876
No 451
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=94.82 E-value=0.066 Score=48.86 Aligned_cols=112 Identities=18% Similarity=0.155 Sum_probs=58.1
Q ss_pred EEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcH-HHHHHH----hcCC--------CCceEEEEecC----------Cc
Q 019519 33 VLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP-GVAADV----GHIN--------TRSEVAGYMGN----------DQ 89 (340)
Q Consensus 33 IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~-~~~~dl----~~~~--------~~~~v~~~~~~----------~d 89 (340)
|+||+||+|+++...|+..+...+|+++-..... .-...+ .+.. ...+++...+. .+
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 6899999999999988877642288888665411 111112 1111 13456655421 11
Q ss_pred cccccCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecC
Q 019519 90 LGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 90 ~~~al~~aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN 146 (340)
+.+-.+++|+||++|+.-. ...+..++...|+...+++.+...+.... .++.+|.
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~-~~~~~~~~~~~NV~gt~~ll~la~~~~~~-~~~~iST 135 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVN-FNAPYSELRAVNVDGTRNLLRLAAQGKRK-RFHYIST 135 (249)
T ss_dssp HHHHHHH--EEEE--SS-S-BS-S--EEHHHHHHHHHHHHHHHTSSS----EEEEEE
T ss_pred hhccccccceeeecchhhh-hcccchhhhhhHHHHHHHHHHHHHhccCc-ceEEecc
Confidence 2222378999999986421 12233345678999999999998854434 4554543
No 452
>PRK06823 ornithine cyclodeaminase; Validated
Probab=94.81 E-value=0.11 Score=49.38 Aligned_cols=70 Identities=7% Similarity=0.092 Sum_probs=48.6
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
..++|+|+ |..+..-+..+.....+.+|.++|.+. +...+..+.+.. ..+... ++.++++++||+|+.+-
T Consensus 129 ~~l~iiG~-G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~--~~v~~~---~~~~~av~~ADIV~taT 200 (315)
T PRK06823 129 SAIGIVGT-GIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALG--FAVNTT---LDAAEVAHAANLIVTTT 200 (315)
T ss_pred CEEEEECC-cHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcC--CcEEEE---CCHHHHhcCCCEEEEec
Confidence 59999997 988877766666555578999999986 233333344322 244433 45689999999999853
No 453
>PRK07578 short chain dehydrogenase; Provisional
Probab=94.81 E-value=0.26 Score=42.91 Aligned_cols=104 Identities=20% Similarity=0.223 Sum_probs=57.6
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPR 108 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~~~ 108 (340)
|++.|+||+|.+|..++..|... . +|++.+.+.. ....|+.+.. .+. ...+.+...|++|..+|...
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~--~vi~~~r~~~-~~~~D~~~~~---~~~------~~~~~~~~id~lv~~ag~~~ 67 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-H--EVITAGRSSG-DVQVDITDPA---SIR------ALFEKVGKVDAVVSAAGKVH 67 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-C--cEEEEecCCC-ceEecCCChH---HHH------HHHHhcCCCCEEEECCCCCC
Confidence 48999999999999999999877 3 8888886531 1111222111 000 00111346899999998642
Q ss_pred C-C--CCCHHH---HHHHHHHHHHHHHHHHHHhC-CCcEEEEec
Q 019519 109 K-P--GMTRDD---LFNINAGIVKDLCSAIAKYC-PNAIVNMIS 145 (340)
Q Consensus 109 ~-~--g~~r~~---~~~~N~~i~~~i~~~i~~~~-p~a~viv~t 145 (340)
. + +.+..+ .+..|+.....+.+....+- +.+.++++|
T Consensus 68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 111 (199)
T PRK07578 68 FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTS 111 (199)
T ss_pred CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence 1 1 223222 23445554444554444331 345566555
No 454
>PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.81 E-value=0.23 Score=49.94 Aligned_cols=126 Identities=16% Similarity=0.128 Sum_probs=76.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
..||+|+|. |.-|.+.+..|...+. ++.+.|.++. .....+|.. . .... . +..+ .+.+.++|+||..-|
T Consensus 8 ~~~v~v~G~-G~sG~~~~~~l~~~g~--~v~~~d~~~~~~~~~~~~l~~-~--~~~~-~-~~~~-~~~~~~~d~vV~Spg 78 (468)
T PRK04690 8 GRRVALWGW-GREGRAAYRALRAHLP--AQALTLFCNAVEAREVGALAD-A--ALLV-E-TEAS-AQRLAAFDVVVKSPG 78 (468)
T ss_pred CCEEEEEcc-chhhHHHHHHHHHcCC--EEEEEcCCCcccchHHHHHhh-c--CEEE-e-CCCC-hHHccCCCEEEECCC
Confidence 358999998 9999999999998887 8999997652 111223433 1 1111 1 1122 355789999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC----CCcEEEEecCCCC--ccHHHHHHHHHHhC
Q 019519 106 VPRKPGMTRDDLFNINAGIVKDLCSAIAKYC----PNAIVNMISNPVN--STVPIAAEVFKKAG 163 (340)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~----p~a~viv~tNP~d--~~t~~~~~~~~~sg 163 (340)
+|...-. .......+++++.++--...... ....+|-+|=..+ +.|.+++++++..|
T Consensus 79 I~~~~p~-~~~a~~~~i~i~~~~el~~~~~~~~~~~~~~~IaITGTnGKTTTt~ll~~iL~~~g 141 (468)
T PRK04690 79 ISPYRPE-ALAAAARGTPFIGGTALWFAEHAARDGVVPGTVCVTGTKGKSTTTALLAHLLRAAG 141 (468)
T ss_pred CCCCCHH-HHHHHHcCCcEEEHHHHHHHHHhhccCCCCCEEEEeCCCCHHHHHHHHHHHHHhcC
Confidence 8853222 22223456777755443232221 1123555665554 67777777777766
No 455
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.80 E-value=0.29 Score=49.26 Aligned_cols=125 Identities=16% Similarity=0.181 Sum_probs=77.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHH-hcCCCCceEEEEecCCccccccCCCCEEEEcCCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADV-GHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl-~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~ 106 (340)
+.||.|+|+ |..|.+++..|...|. ++..+|.+.... .++ .... +..+.+..+ .+.+.++|+||...|+
T Consensus 15 ~~~v~v~G~-G~sG~a~a~~L~~~G~--~V~~~D~~~~~~--~~~l~~~g----i~~~~~~~~-~~~~~~~d~vV~Spgi 84 (473)
T PRK00141 15 SGRVLVAGA-GVSGRGIAAMLSELGC--DVVVADDNETAR--HKLIEVTG----VADISTAEA-SDQLDSFSLVVTSPGW 84 (473)
T ss_pred CCeEEEEcc-CHHHHHHHHHHHHCCC--EEEEECCChHHH--HHHHHhcC----cEEEeCCCc-hhHhcCCCEEEeCCCC
Confidence 358999998 9999999999998887 899999654221 122 2211 222222112 3457899999999998
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHH-----hCCCcEEEEecCCCC--ccHHHHHHHHHHhC
Q 019519 107 PRKPGMTRDDLFNINAGIVKDLCSAIAK-----YCPNAIVNMISNPVN--STVPIAAEVFKKAG 163 (340)
Q Consensus 107 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~-----~~p~a~viv~tNP~d--~~t~~~~~~~~~sg 163 (340)
|...-. ....-..+++++.++.-.... +.....+|-+|=..+ +.+.+++.+++..|
T Consensus 85 ~~~~p~-~~~a~~~gi~v~~~~el~~~~~~~~~~~~~~~vIaVTGTnGKTTTt~ml~~iL~~~g 147 (473)
T PRK00141 85 RPDSPL-LVDAQSQGLEVIGDVELAWRLDQAGVFGEPRTWLAVTGTNGKTTTTAMLAAMMQEGG 147 (473)
T ss_pred CCCCHH-HHHHHHCCCceeeHHHHHHHhhhhhccCCCCCEEEEeCCCcHHHHHHHHHHHHHhcC
Confidence 853322 222234566776666543321 221224566766665 67777777788776
No 456
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=94.79 E-value=0.69 Score=44.38 Aligned_cols=113 Identities=18% Similarity=0.281 Sum_probs=66.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc-HHHHHHHhcCCCCceEEEEecCCccccccCC-CCEEEEcCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT-PGVAADVGHINTRSEVAGYMGNDQLGQALED-SDVVIIPAG 105 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~-aDiVi~~ag 105 (340)
-.+|+|+|+ |-+|...+..+...+. +++.+|+++. ...+.+|. ...-+.. . ..|.-+++++ +|+||.|++
T Consensus 167 G~~V~I~G~-GGlGh~avQ~Aka~ga--~Via~~~~~~K~e~a~~lG---Ad~~i~~-~-~~~~~~~~~~~~d~ii~tv~ 238 (339)
T COG1064 167 GKWVAVVGA-GGLGHMAVQYAKAMGA--EVIAITRSEEKLELAKKLG---ADHVINS-S-DSDALEAVKEIADAIIDTVG 238 (339)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCC--eEEEEeCChHHHHHHHHhC---CcEEEEc-C-CchhhHHhHhhCcEEEECCC
Confidence 469999998 8777776666665664 9999999873 33444553 1111221 1 1222344433 999999985
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCC-CccH--HHHHHHHHHhCCCCCCceEec
Q 019519 106 VPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPV-NSTV--PIAAEVFKKAGTYNEKKLFGV 173 (340)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~-d~~t--~~~~~~~~~sg~~~~~kviG~ 173 (340)
+ .-+. ..++-..+++.++.+.+|- ..+. .+.. .- +...+|.|.
T Consensus 239 -~---------------~~~~---~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~----li--~~~~~i~GS 284 (339)
T COG1064 239 -P---------------ATLE---PSLKALRRGGTLVLVGLPGGGPIPLLPAFL----LI--LKEISIVGS 284 (339)
T ss_pred -h---------------hhHH---HHHHHHhcCCEEEEECCCCCcccCCCCHHH----hh--hcCeEEEEE
Confidence 3 1122 2333345789999999994 3322 1211 11 345688887
No 457
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=94.75 E-value=0.52 Score=41.98 Aligned_cols=113 Identities=19% Similarity=0.201 Sum_probs=61.4
Q ss_pred eEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCC-Cc--HHHHHHHhcCCCCceEEEEe-cCCcc----------ccccC
Q 019519 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIA-NT--PGVAADVGHINTRSEVAGYM-GNDQL----------GQALE 95 (340)
Q Consensus 30 KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~-~~--~~~~~dl~~~~~~~~v~~~~-~~~d~----------~~al~ 95 (340)
.+.|+||+|.+|+.++..|+..+. ++++.... +. .....++.... .++.... +-+|. .+.+.
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (242)
T TIGR01829 2 IALVTGGMGGIGTAICQRLAKDGY--RVAANCGPNEERAEAWLQEQGALG--FDFRVVEGDVSSFESCKAAVAKVEAELG 77 (242)
T ss_pred EEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhhC--CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 578999999999999999998887 78887762 21 11112222111 1222221 11221 11234
Q ss_pred CCCEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHH----HHHHHHHhCCCcEEEEecCC
Q 019519 96 DSDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKD----LCSAIAKYCPNAIVNMISNP 147 (340)
Q Consensus 96 ~aDiVi~~ag~~~~~---g~~---r~~~~~~N~~i~~~----i~~~i~~~~p~a~viv~tNP 147 (340)
..|+||+.+|..... ..+ ....+..|..-... +.+.+++. +.+.+++++..
T Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~iss~ 138 (242)
T TIGR01829 78 PIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-GWGRIINISSV 138 (242)
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcch
Confidence 689999999864321 112 23344556664444 44444433 34566666644
No 458
>PRK06484 short chain dehydrogenase; Validated
Probab=94.75 E-value=0.23 Score=50.17 Aligned_cols=115 Identities=22% Similarity=0.228 Sum_probs=63.3
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-cCCcccc-------ccCCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-GNDQLGQ-------ALEDSD 98 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~~~d~~~-------al~~aD 98 (340)
..+.|+||++.+|..++..|+..+. .|+++|.+.. .....++..... .+.... ...++++ .+...|
T Consensus 6 k~~lITGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~D~~~~~~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 6 RVVLVTGAAGGIGRAACQRFARAGD--QVVVADRNVERARERADSLGPDHH--ALAMDVSDEAQIREGFEQLHREFGRID 81 (520)
T ss_pred eEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCcee--EEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence 5788999999999999999999887 8999998652 222222221110 111110 0111111 234689
Q ss_pred EEEEcCCCC--C-CC--CCC---HHHHHHHHHH----HHHHHHHHHHHhCCCcEEEEecCC
Q 019519 99 VVIIPAGVP--R-KP--GMT---RDDLFNINAG----IVKDLCSAIAKYCPNAIVNMISNP 147 (340)
Q Consensus 99 iVi~~ag~~--~-~~--g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNP 147 (340)
++|+.+|.. . .+ ..+ -...+..|+. +.+.+.+.+.+....+.+++++.-
T Consensus 82 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~ 142 (520)
T PRK06484 82 VLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASG 142 (520)
T ss_pred EEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCc
Confidence 999999862 1 11 222 2234455555 444455555443333366766643
No 459
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=94.74 E-value=0.095 Score=51.07 Aligned_cols=75 Identities=15% Similarity=0.176 Sum_probs=49.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEE-ecCCccccccCCCCEEEEcCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGY-MGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~-~~~~d~~~al~~aDiVi~~ag 105 (340)
++.||+|+|+ |.+|...+..+...|. +|..+|.+..+.. .+.... ...+... ....++.+.++++|+||.+.+
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa--~V~v~d~~~~~~~--~l~~~~-g~~v~~~~~~~~~l~~~l~~aDvVI~a~~ 239 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGA--TVTILDINIDRLR--QLDAEF-GGRIHTRYSNAYEIEDAVKRADLLIGAVL 239 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCC--eEEEEECCHHHHH--HHHHhc-CceeEeccCCHHHHHHHHccCCEEEEccc
Confidence 4568999998 9999999999987776 7999998752211 121111 0112111 111345677899999999876
Q ss_pred CC
Q 019519 106 VP 107 (340)
Q Consensus 106 ~~ 107 (340)
.|
T Consensus 240 ~~ 241 (370)
T TIGR00518 240 IP 241 (370)
T ss_pred cC
Confidence 54
No 460
>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional
Probab=94.73 E-value=0.022 Score=54.03 Aligned_cols=70 Identities=14% Similarity=0.197 Sum_probs=47.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCC-cceEEEEeCC-CcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPL-VSRLALYDIA-NTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~-~~el~L~D~~-~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
..++|+| ||+|.||..+...|-++++ ++++.|++.. ...+....+. ...+..-. -+ ++++++.|++++ +
T Consensus 2 ~~~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~~~s~gk~i~f~----g~~~~V~~--l~-~~~f~~vDia~f-a 72 (322)
T PRK06901 2 ATLNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIEPFGEEQGIRFN----NKAVEQIA--PE-EVEWADFNYVFF-A 72 (322)
T ss_pred CcceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccccccCCCEEEEC----CEEEEEEE--CC-ccCcccCCEEEE-c
Confidence 4579999 9999999999998888874 7899999876 3333222111 11222221 11 356899999999 6
Q ss_pred C
Q 019519 105 G 105 (340)
Q Consensus 105 g 105 (340)
|
T Consensus 73 g 73 (322)
T PRK06901 73 G 73 (322)
T ss_pred C
Confidence 5
No 461
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=94.72 E-value=0.053 Score=52.08 Aligned_cols=72 Identities=21% Similarity=0.279 Sum_probs=45.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCC-CcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNP-LVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~-~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
+.+||+|+||+|.+|..+...|.... ...||.++-.++..|....+.. . .+.... .+ +.++.++|+|+++.+
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~~--~--~~~v~~--~~-~~~~~~~Dvvf~a~p 75 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFGG--K--SVTVQD--AA-EFDWSQAQLAFFVAG 75 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEECC--c--ceEEEe--Cc-hhhccCCCEEEECCC
Confidence 34799999999999999999888753 3468888865442232222221 1 222211 12 234579999999764
No 462
>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]
Probab=94.67 E-value=0.16 Score=50.59 Aligned_cols=128 Identities=21% Similarity=0.225 Sum_probs=79.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVP 107 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~~ 107 (340)
++||+|+|- |.-|.+++..|...+. ++..+|.++......+.. .....+....+..+. +...++|+||..-|+|
T Consensus 7 ~~kv~V~GL-G~sG~a~a~~L~~~G~--~v~v~D~~~~~~~~~~~~--~~~~~i~~~~g~~~~-~~~~~~d~vV~SPGi~ 80 (448)
T COG0771 7 GKKVLVLGL-GKSGLAAARFLLKLGA--EVTVSDDRPAPEGLAAQP--LLLEGIEVELGSHDD-EDLAEFDLVVKSPGIP 80 (448)
T ss_pred CCEEEEEec-ccccHHHHHHHHHCCC--eEEEEcCCCCccchhhhh--hhccCceeecCccch-hccccCCEEEECCCCC
Confidence 679999998 9999999999998886 999999876221001111 001233333333333 6688999999999987
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEe--cCCCCccHHHHHHHHHHhC
Q 019519 108 RKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI--SNPVNSTVPIAAEVFKKAG 163 (340)
Q Consensus 108 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~--tNP~d~~t~~~~~~~~~sg 163 (340)
..+-.- .......++++-++--..+.. +.+.+|-+ ||==.+.|.+++++++.+|
T Consensus 81 ~~~p~v-~~A~~~gi~i~~dieL~~r~~-~~~p~vaITGTNGKTTTTsli~~~l~~~G 136 (448)
T COG0771 81 PTHPLV-EAAKAAGIEIIGDIELFYRLS-GEAPIVAITGTNGKTTTTSLIAHLLKAAG 136 (448)
T ss_pred CCCHHH-HHHHHcCCcEEeHHHHHHHhc-CCCCEEEEECCCchHHHHHHHHHHHHhcC
Confidence 533311 112245566666665555543 22224445 4444477777888888887
No 463
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=94.65 E-value=0.072 Score=51.33 Aligned_cols=34 Identities=32% Similarity=0.373 Sum_probs=26.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEe
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYD 61 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D 61 (340)
|+||+|+||+|.+|..++..|...+.+.-+.+.|
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~ 35 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTS 35 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEEC
Confidence 4799999999999999998888765433345566
No 464
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=94.65 E-value=0.29 Score=39.47 Aligned_cols=33 Identities=39% Similarity=0.521 Sum_probs=24.0
Q ss_pred eEEEEcCCCChHHHHHHHHHhCCCcceEE-EEeCC
Q 019519 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLA-LYDIA 63 (340)
Q Consensus 30 KI~IiGaaG~VG~~~a~~l~~~~~~~el~-L~D~~ 63 (340)
||+|+|++|.+|..++..+...+.+ +++ +++.+
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~-~l~av~~~~ 34 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDF-EVVALAASA 34 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCc-eEEEEEech
Confidence 6899997799999998888875433 444 34654
No 465
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=94.63 E-value=0.15 Score=50.51 Aligned_cols=103 Identities=23% Similarity=0.398 Sum_probs=62.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcH--HHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~--~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
..+|+|+|+ |.+|..++..|...+. .+|+++|.+... ..+.++. ..+... .++.+++.++|+||.+.+
T Consensus 182 ~~~vlViGa-G~iG~~~a~~L~~~G~-~~V~v~~r~~~ra~~la~~~g-----~~~~~~---~~~~~~l~~aDvVI~aT~ 251 (423)
T PRK00045 182 GKKVLVIGA-GEMGELVAKHLAEKGV-RKITVANRTLERAEELAEEFG-----GEAIPL---DELPEALAEADIVISSTG 251 (423)
T ss_pred CCEEEEECc-hHHHHHHHHHHHHCCC-CeEEEEeCCHHHHHHHHHHcC-----CcEeeH---HHHHHHhccCCEEEECCC
Confidence 469999998 9999999988876653 579999986522 2222221 112211 355677899999999876
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHH-HhCCCcEEEEecCCCCccH
Q 019519 106 VPRKPGMTRDDLFNINAGIVKDLCSAIA-KYCPNAIVNMISNPVNSTV 152 (340)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~-~~~p~a~viv~tNP~d~~t 152 (340)
.|... .. .+.++. .+. +.....+++-+++|-|+=.
T Consensus 252 s~~~~-i~--------~~~l~~---~~~~~~~~~~vviDla~Prdid~ 287 (423)
T PRK00045 252 APHPI-IG--------KGMVER---ALKARRHRPLLLVDLAVPRDIEP 287 (423)
T ss_pred CCCcE-Ec--------HHHHHH---HHhhccCCCeEEEEeCCCCCCcc
Confidence 54211 11 111111 111 1124578888999987643
No 466
>PRK07877 hypothetical protein; Provisional
Probab=94.63 E-value=0.14 Score=53.94 Aligned_cols=76 Identities=21% Similarity=0.336 Sum_probs=50.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC-----cHHH---------------HHHHhcCCCCceEEEEec
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-----TPGV---------------AADVGHINTRSEVAGYMG 86 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~-----~~~~---------------~~dl~~~~~~~~v~~~~~ 86 (340)
+..||+|+|+ | +|++++..|+..|++.+|.|+|-+. ..-+ +..+.......+|+.+..
T Consensus 106 ~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~ 183 (722)
T PRK07877 106 GRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTD 183 (722)
T ss_pred hcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEec
Confidence 3569999998 9 9999999999998778999999874 1111 111222222334554431
Q ss_pred ---CCccccccCCCCEEEEcC
Q 019519 87 ---NDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 87 ---~~d~~~al~~aDiVi~~a 104 (340)
..+..+.++++|+||-+.
T Consensus 184 ~i~~~n~~~~l~~~DlVvD~~ 204 (722)
T PRK07877 184 GLTEDNVDAFLDGLDVVVEEC 204 (722)
T ss_pred cCCHHHHHHHhcCCCEEEECC
Confidence 134555678999999875
No 467
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.59 E-value=0.21 Score=49.94 Aligned_cols=124 Identities=21% Similarity=0.273 Sum_probs=77.1
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc---HHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
.||.|+|. |..|.+++..|...|. ++...|.++. .....+|.... +....+. +..+.+.++|+||.+.|
T Consensus 15 ~~i~v~G~-G~sG~a~a~~L~~~G~--~V~~~D~~~~~~~~~~~~~l~~~g----i~~~~~~-~~~~~~~~~dlVV~Spg 86 (458)
T PRK01710 15 KKVAVVGI-GVSNIPLIKFLVKLGA--KVTAFDKKSEEELGEVSNELKELG----VKLVLGE-NYLDKLDGFDVIFKTPS 86 (458)
T ss_pred CeEEEEcc-cHHHHHHHHHHHHCCC--EEEEECCCCCccchHHHHHHHhCC----CEEEeCC-CChHHhccCCEEEECCC
Confidence 49999998 9999999999998887 8999997651 11122344322 2222222 22355789999999988
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCC--ccHHHHHHHHHHhC
Q 019519 106 VPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVN--STVPIAAEVFKKAG 163 (340)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d--~~t~~~~~~~~~sg 163 (340)
++...-+ .......+++++.++-. +.++. +..+|-+|=..+ +.+.+++.+++..|
T Consensus 87 i~~~~p~-~~~a~~~~i~i~s~~e~-~~~~~-~~~vIaITGTnGKTTT~~ll~~iL~~~g 143 (458)
T PRK01710 87 MRIDSPE-LVKAKEEGAYITSEMEE-FIKYC-PAKVFGVTGSDGKTTTTTLIYEMLKEEG 143 (458)
T ss_pred CCCCchH-HHHHHHcCCcEEechHH-hhhhc-CCCEEEEECCCCHHHHHHHHHHHHHhCC
Confidence 8753322 22223467777765532 22332 234566666655 66777777777666
No 468
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=94.57 E-value=0.12 Score=48.27 Aligned_cols=60 Identities=18% Similarity=0.273 Sum_probs=43.0
Q ss_pred EEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 33 VLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 33 IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
|||. |.+|..++..|...++ +|.++|.++.. ..++.... ... ..++.+++++||+||++.
T Consensus 1 ~IGl-G~mG~~mA~~L~~~G~--~V~v~dr~~~~--~~~l~~~g----~~~---~~s~~~~~~~advVil~v 60 (288)
T TIGR01692 1 FIGL-GNMGGPMAANLLKAGH--PVRVFDLFPDA--VEEAVAAG----AQA---AASPAEAAEGADRVITML 60 (288)
T ss_pred CCcc-cHhHHHHHHHHHhCCC--eEEEEeCCHHH--HHHHHHcC----Cee---cCCHHHHHhcCCEEEEeC
Confidence 5797 9999999999998887 89999987522 22233221 111 134567899999999985
No 469
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.56 E-value=0.2 Score=49.92 Aligned_cols=128 Identities=19% Similarity=0.305 Sum_probs=75.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVP 107 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~~ 107 (340)
.++|.|+|+ |..|.+.+..|...|. ++.+.|..........|..... .+..+.+..+ ...+.++|+||...|+|
T Consensus 5 ~~~~~v~G~-g~~G~~~a~~l~~~g~--~v~~~d~~~~~~~~~~l~~~~~--gi~~~~g~~~-~~~~~~~d~vv~spgi~ 78 (445)
T PRK04308 5 NKKILVAGL-GGTGISMIAYLRKNGA--EVAAYDAELKPERVAQIGKMFD--GLVFYTGRLK-DALDNGFDILALSPGIS 78 (445)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCCCchhHHHHhhccC--CcEEEeCCCC-HHHHhCCCEEEECCCCC
Confidence 358999998 9999999988888887 8999997652211223433211 2333322212 23357899999999987
Q ss_pred CCCCCCHHHHHHHHHHHHHH--HHHHHHHhCCCcEEEEecCCCC--ccHHHHHHHHHHhC
Q 019519 108 RKPGMTRDDLFNINAGIVKD--LCSAIAKYCPNAIVNMISNPVN--STVPIAAEVFKKAG 163 (340)
Q Consensus 108 ~~~g~~r~~~~~~N~~i~~~--i~~~i~~~~p~a~viv~tNP~d--~~t~~~~~~~~~sg 163 (340)
...-. .......+++++.+ ++..+.+. .+..+|-+|=..+ +.|.+++++++.+|
T Consensus 79 ~~~p~-~~~a~~~~i~v~~~~~~~~~~~~~-~~~~~I~ITGT~GKTTTt~li~~iL~~~g 136 (445)
T PRK04308 79 ERQPD-IEAFKQNGGRVLGDIELLADIVNR-RGDKVIAITGSNGKTTVTSLVGYLCIKCG 136 (445)
T ss_pred CCCHH-HHHHHHcCCcEEEhHHHHHHhhhc-CCCCEEEEECCCcHHHHHHHHHHHHHHcC
Confidence 43221 11122355665533 32222211 1234555665555 67777877888777
No 470
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=94.53 E-value=0.17 Score=50.56 Aligned_cols=90 Identities=23% Similarity=0.291 Sum_probs=60.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHH-HHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG-VAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~-~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
...+|+|+|. |.+|..++..+...+. +|..+|.++... .+.. + .+ .+ .+++++++.||+||.+.|
T Consensus 253 aGKtVgVIG~-G~IGr~vA~rL~a~Ga--~ViV~e~dp~~a~~A~~--~-G~--~~------~~leell~~ADIVI~atG 318 (476)
T PTZ00075 253 AGKTVVVCGY-GDVGKGCAQALRGFGA--RVVVTEIDPICALQAAM--E-GY--QV------VTLEDVVETADIFVTATG 318 (476)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhHHHHHh--c-Cc--ee------ccHHHHHhcCCEEEECCC
Confidence 4469999998 9999999999987776 899998876322 1111 1 11 11 135678999999999864
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCC
Q 019519 106 VPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNP 147 (340)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP 147 (340)
.+ .++. .+.++...|.+++++++-.
T Consensus 319 t~---------------~iI~--~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 319 NK---------------DIIT--LEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred cc---------------cccC--HHHHhccCCCcEEEEcCCC
Confidence 22 1111 1234445588999998766
No 471
>PRK06483 dihydromonapterin reductase; Provisional
Probab=94.53 E-value=0.42 Score=42.71 Aligned_cols=34 Identities=18% Similarity=0.166 Sum_probs=30.5
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
+++.|+||+|.+|..++..|+..+. +|++.|.++
T Consensus 3 k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~ 36 (236)
T PRK06483 3 APILITGAGQRIGLALAWHLLAQGQ--PVIVSYRTH 36 (236)
T ss_pred ceEEEECCCChHHHHHHHHHHHCCC--eEEEEeCCc
Confidence 4789999999999999999998887 899999875
No 472
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=94.52 E-value=0.07 Score=50.90 Aligned_cols=73 Identities=26% Similarity=0.276 Sum_probs=45.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCC--CceEEEEecCCcccc-ccCCCCEEEEc
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINT--RSEVAGYMGNDQLGQ-ALEDSDVVIIP 103 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~--~~~v~~~~~~~d~~~-al~~aDiVi~~ 103 (340)
|+||+|+||+|..|..+.-.|...+.+ |+.++...+..+..+.-.|... ...+.... .|.++ ..++||+||++
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~v-e~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~~--~~~~~~~~~~~DvvFla 77 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPDV-ELILISSRERAGKPVSDVHPNLRGLVDLPFQT--IDPEKIELDECDVVFLA 77 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCCe-EEEEeechhhcCCchHHhCccccccccccccc--CChhhhhcccCCEEEEe
Confidence 679999999999999999988888754 6888876553333322222211 11122211 12222 24569999996
No 473
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=94.52 E-value=0.096 Score=45.23 Aligned_cols=55 Identities=27% Similarity=0.522 Sum_probs=42.8
Q ss_pred CCCeEEEEcCCCC-hHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 27 PDRKVAVLGAAGG-IGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 27 ~~~KI~IiGaaG~-VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
...||.|+|+ |. +|..++..|...+. ++.+++.+. .++.+.+++||+||.+.+
T Consensus 43 ~gk~vlViG~-G~~~G~~~a~~L~~~g~--~V~v~~r~~-----------------------~~l~~~l~~aDiVIsat~ 96 (168)
T cd01080 43 AGKKVVVVGR-SNIVGKPLAALLLNRNA--TVTVCHSKT-----------------------KNLKEHTKQADIVIVAVG 96 (168)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHhhCCC--EEEEEECCc-----------------------hhHHHHHhhCCEEEEcCC
Confidence 3569999998 86 58889988888776 788887431 245677899999999887
Q ss_pred CC
Q 019519 106 VP 107 (340)
Q Consensus 106 ~~ 107 (340)
.|
T Consensus 97 ~~ 98 (168)
T cd01080 97 KP 98 (168)
T ss_pred CC
Confidence 66
No 474
>PRK08862 short chain dehydrogenase; Provisional
Probab=94.48 E-value=1.1 Score=40.20 Aligned_cols=115 Identities=10% Similarity=0.104 Sum_probs=64.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEe-cCCc---cc-------ccc
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-GNDQ---LG-------QAL 94 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~~~d---~~-------~al 94 (340)
.+.+.|+||++.+|..++..|+..|. +|++++.++ .+....++.... .++..+. +..| .+ +.+
T Consensus 5 ~k~~lVtGas~GIG~aia~~la~~G~--~V~~~~r~~~~l~~~~~~i~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (227)
T PRK08862 5 SSIILITSAGSVLGRTISCHFARLGA--TLILCDQDQSALKDTYEQCSALT--DNVYSFQLKDFSQESIRHLFDAIEQQF 80 (227)
T ss_pred CeEEEEECCccHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC--CCeEEEEccCCCHHHHHHHHHHHHHHh
Confidence 35899999988999999999999887 899998876 222222332211 1122111 1112 21 112
Q ss_pred C-CCCEEEEcCCCCCCC----CCCHHH---HHHHHH----HHHHHHHHHHHHhCCCcEEEEecC
Q 019519 95 E-DSDVVIIPAGVPRKP----GMTRDD---LFNINA----GIVKDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 95 ~-~aDiVi~~ag~~~~~----g~~r~~---~~~~N~----~i~~~i~~~i~~~~p~a~viv~tN 146 (340)
. .-|++|..+|....+ ..+..+ .+..|. ...+...+.+.+....+.|+++|.
T Consensus 81 g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS 144 (227)
T PRK08862 81 NRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVIS 144 (227)
T ss_pred CCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEec
Confidence 3 689999998742211 122222 222232 344555666665444567777764
No 475
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=94.46 E-value=0.3 Score=43.51 Aligned_cols=71 Identities=17% Similarity=0.108 Sum_probs=47.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~ 106 (340)
..||.|+|+ |.+|..-+..|+..+. +|+++|.+... ...++.... ++.......+ ...+.++|+||.+-+.
T Consensus 9 gk~vlVvGg-G~va~rk~~~Ll~~ga--~VtVvsp~~~~-~l~~l~~~~---~i~~~~~~~~-~~dl~~~~lVi~at~d 79 (205)
T TIGR01470 9 GRAVLVVGG-GDVALRKARLLLKAGA--QLRVIAEELES-ELTLLAEQG---GITWLARCFD-ADILEGAFLVIAATDD 79 (205)
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCCC--EEEEEcCCCCH-HHHHHHHcC---CEEEEeCCCC-HHHhCCcEEEEECCCC
Confidence 469999998 9999999999988876 89999875432 222333222 3443322222 3568999999987543
No 476
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=94.44 E-value=0.13 Score=49.21 Aligned_cols=71 Identities=23% Similarity=0.398 Sum_probs=48.6
Q ss_pred CCCCCCCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEE
Q 019519 21 YSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVV 100 (340)
Q Consensus 21 ~~~~~~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiV 100 (340)
+.+.....+.|+|||. |.+|+.++..+..-+. +|..||....+.... .+ .... ..++++-++.||||
T Consensus 135 ~~g~el~gkTvGIiG~-G~IG~~va~~l~afgm--~v~~~d~~~~~~~~~--~~-----~~~~---~~~Ld~lL~~sDiv 201 (324)
T COG0111 135 FRGTELAGKTVGIIGL-GRIGRAVAKRLKAFGM--KVIGYDPYSPRERAG--VD-----GVVG---VDSLDELLAEADIL 201 (324)
T ss_pred cccccccCCEEEEECC-CHHHHHHHHHHHhCCC--eEEEECCCCchhhhc--cc-----ccee---cccHHHHHhhCCEE
Confidence 4333334579999998 9999999999987777 999999843221111 00 1111 13567889999999
Q ss_pred EEcC
Q 019519 101 IIPA 104 (340)
Q Consensus 101 i~~a 104 (340)
++..
T Consensus 202 ~lh~ 205 (324)
T COG0111 202 TLHL 205 (324)
T ss_pred EEcC
Confidence 9963
No 477
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.41 E-value=0.21 Score=49.74 Aligned_cols=124 Identities=18% Similarity=0.273 Sum_probs=75.5
Q ss_pred eEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHH---HHHHhcCCCCceEEEEecCCccc-----cccCCCCEEE
Q 019519 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGV---AADVGHINTRSEVAGYMGNDQLG-----QALEDSDVVI 101 (340)
Q Consensus 30 KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~---~~dl~~~~~~~~v~~~~~~~d~~-----~al~~aDiVi 101 (340)
||.|+|+ |..|.+.+..|...|+ ++.+.|.++.... ...|.... +..+.+. +.. ..+.+.|.||
T Consensus 2 ~v~viG~-G~sG~s~a~~l~~~G~--~V~~~D~~~~~~~~~~~~~l~~~g----i~~~~g~-~~~~~~~~~~~~~~d~vv 73 (459)
T PRK02705 2 IAHVIGL-GRSGIAAARLLKAQGW--EVVVSDRNDSPELLERQQELEQEG----ITVKLGK-PLELESFQPWLDQPDLVV 73 (459)
T ss_pred eEEEEcc-CHHHHHHHHHHHHCCC--EEEEECCCCchhhHHHHHHHHHcC----CEEEECC-ccchhhhhHHhhcCCEEE
Confidence 7999998 9999999989998887 9999998762111 11244322 2222221 111 2477899999
Q ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCC--ccHHHHHHHHHHhC
Q 019519 102 IPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVN--STVPIAAEVFKKAG 163 (340)
Q Consensus 102 ~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d--~~t~~~~~~~~~sg 163 (340)
.+.|.|...-+ .......+++++.++....+... +..+|-+|=..+ +.|.+++.+++..|
T Consensus 74 ~s~gi~~~~~~-~~~a~~~~i~v~~~~~~~~~~~~-~~~~I~VTGT~GKTTTt~ml~~iL~~~g 135 (459)
T PRK02705 74 VSPGIPWDHPT-LVELRERGIEVIGEIELAWRALK-HIPWVGITGTNGKTTVTALLAHILQAAG 135 (459)
T ss_pred ECCCCCCCCHH-HHHHHHcCCcEEEhHHHHHHhhc-CCCEEEEeCCCchHHHHHHHHHHHHHcC
Confidence 99888743211 11222456677766654433322 333455554544 67777777787777
No 478
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.37 E-value=0.13 Score=50.21 Aligned_cols=35 Identities=31% Similarity=0.606 Sum_probs=31.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIA 63 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~ 63 (340)
+..||+|+|+ |-+|+.++..|+..|. .+|.|+|.+
T Consensus 134 ~~~~VlvvG~-GG~Gs~ia~~La~~Gv-g~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGA-GGLGSPAALYLAAAGV-GTLGIVDHD 168 (376)
T ss_pred hcCcEEEECC-CHHHHHHHHHHHHcCC-CeEEEEeCC
Confidence 3469999998 9999999999998885 689999987
No 479
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=94.36 E-value=0.3 Score=48.42 Aligned_cols=93 Identities=18% Similarity=0.218 Sum_probs=59.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~ 106 (340)
...+|+|+|+ |.+|..++..+...+. +|+++|+++.+..... .+ .+ .+ .+++++++++|+||.+.|.
T Consensus 211 ~Gk~VlViG~-G~IG~~vA~~lr~~Ga--~ViV~d~dp~ra~~A~-~~-G~--~v------~~l~eal~~aDVVI~aTG~ 277 (425)
T PRK05476 211 AGKVVVVAGY-GDVGKGCAQRLRGLGA--RVIVTEVDPICALQAA-MD-GF--RV------MTMEEAAELGDIFVTATGN 277 (425)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEcCCchhhHHHH-hc-CC--Ee------cCHHHHHhCCCEEEECCCC
Confidence 3469999998 9999999999987776 8999998863221110 11 11 21 1346778999999987642
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCC
Q 019519 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVN 149 (340)
Q Consensus 107 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d 149 (340)
+ .++. .+.+....+.+++++++-+.+
T Consensus 278 ~---------------~vI~--~~~~~~mK~GailiNvG~~d~ 303 (425)
T PRK05476 278 K---------------DVIT--AEHMEAMKDGAILANIGHFDN 303 (425)
T ss_pred H---------------HHHH--HHHHhcCCCCCEEEEcCCCCC
Confidence 2 2222 122333446789998876643
No 480
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=94.35 E-value=0.45 Score=44.25 Aligned_cols=35 Identities=26% Similarity=0.497 Sum_probs=31.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
..+|+|+|+ |.||+.++..|+..|+ .+|.|+|.+.
T Consensus 30 ~s~VlVvG~-GGVGs~vae~Lar~GV-g~itLiD~D~ 64 (268)
T PRK15116 30 DAHICVVGI-GGVGSWAAEALARTGI-GAITLIDMDD 64 (268)
T ss_pred CCCEEEECc-CHHHHHHHHHHHHcCC-CEEEEEeCCE
Confidence 469999998 9999999999999885 5899999874
No 481
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=94.35 E-value=0.25 Score=48.16 Aligned_cols=37 Identities=27% Similarity=0.477 Sum_probs=31.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
.+..||+|+|+ |.+|+.++..|+..|. .+|.|+|.+.
T Consensus 39 l~~~~VliiG~-GglG~~v~~~La~~Gv-g~i~ivD~D~ 75 (370)
T PRK05600 39 LHNARVLVIGA-GGLGCPAMQSLASAGV-GTITLIDDDT 75 (370)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEeCCE
Confidence 44579999998 9999999999998875 6899999873
No 482
>TIGR01087 murD UDP-N-acetylmuramoylalanine--D-glutamate ligase.
Probab=94.34 E-value=0.18 Score=49.89 Aligned_cols=123 Identities=17% Similarity=0.240 Sum_probs=74.6
Q ss_pred eEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc-HHHH-HH-HhcCCCCceEEEEecCCccccccCCCCEEEEcCCC
Q 019519 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT-PGVA-AD-VGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (340)
Q Consensus 30 KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~-~~~~-~d-l~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~ 106 (340)
||.|+|. |..|.++|..|...|+ +|...|.... .... .. +.... .+..+.+ .+ .+.+.++|+||...|+
T Consensus 1 ~~~~iG~-G~~G~a~a~~l~~~G~--~V~~sD~~~~~~~~~~~~~~~~~~---gi~~~~g-~~-~~~~~~~d~vv~sp~i 72 (433)
T TIGR01087 1 KILILGL-GKTGRAVARFLHKKGA--EVTVTDLKPNEELEPSMGQLRLNE---GSVLHTG-LH-LEDLNNADLVVKSPGI 72 (433)
T ss_pred CEEEEEe-CHhHHHHHHHHHHCCC--EEEEEeCCCCccchhHHHHHhhcc---CcEEEec-Cc-hHHhccCCEEEECCCC
Confidence 6889998 9999999999998888 9999998652 1111 11 22111 1222222 23 3567899999999998
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCC--ccHHHHHHHHHHhC
Q 019519 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVN--STVPIAAEVFKKAG 163 (340)
Q Consensus 107 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d--~~t~~~~~~~~~sg 163 (340)
|...-+ .......+++++.+. +.+.+.. +..+|-+|=..+ +.|.+++.+++..|
T Consensus 73 ~~~~p~-~~~a~~~~i~i~~~~-e~~~~~~-~~~~I~VTGT~GKTTTt~li~~iL~~~g 128 (433)
T TIGR01087 73 PPDHPL-VQAAAKRGIPVVGDI-ELFLRLV-PLPVVAITGTNGKTTTTSLLYHLLKAAG 128 (433)
T ss_pred CCCCHH-HHHHHHCCCcEEEHH-HHHHhhc-CCCEEEEECCCCHHHHHHHHHHHHHhcC
Confidence 753221 222234566665553 2233333 334555665554 67777777787776
No 483
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.30 E-value=2.2 Score=39.16 Aligned_cols=156 Identities=13% Similarity=0.133 Sum_probs=78.2
Q ss_pred CCeEEEEcCCC--ChHHHHHHHHHhCCCcceEEEEeCCC-cHHHHHHHhcCCCCceEEEE-ecCCc---cc-------cc
Q 019519 28 DRKVAVLGAAG--GIGQPLALLMKLNPLVSRLALYDIAN-TPGVAADVGHINTRSEVAGY-MGNDQ---LG-------QA 93 (340)
Q Consensus 28 ~~KI~IiGaaG--~VG~~~a~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~-~~~~d---~~-------~a 93 (340)
.+.+.|+||++ -+|..++..|+..|. .|++.|.+. ......++..... ....+ .+-+| .+ +.
T Consensus 6 ~k~~lITGas~~~GIG~aia~~la~~G~--~vil~~r~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~ 81 (262)
T PRK07984 6 GKRILVTGVASKLSIAYGIAQAMHREGA--ELAFTYQNDKLKGRVEEFAAQLG--SDIVLPCDVAEDASIDAMFAELGKV 81 (262)
T ss_pred CCEEEEeCCCCCccHHHHHHHHHHHCCC--EEEEEecchhHHHHHHHHHhccC--CceEeecCCCCHHHHHHHHHHHHhh
Confidence 35788999853 699999999999887 788988764 2223333432211 11111 11112 11 11
Q ss_pred cCCCCEEEEcCCCCCCC--------CCCHH---HHHHHHHHHHHHHHHHHHHh-CCCcEEEEecCCCCccHHHHHHHHHH
Q 019519 94 LEDSDVVIIPAGVPRKP--------GMTRD---DLFNINAGIVKDLCSAIAKY-CPNAIVNMISNPVNSTVPIAAEVFKK 161 (340)
Q Consensus 94 l~~aDiVi~~ag~~~~~--------g~~r~---~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP~d~~t~~~~~~~~~ 161 (340)
+-..|++|..+|..... +.+.. ..+.-|......+.+.+... .+.+.|+++|.-....
T Consensus 82 ~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~---------- 151 (262)
T PRK07984 82 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER---------- 151 (262)
T ss_pred cCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC----------
Confidence 23579999999864211 12222 22344554333333333221 2356777776432110
Q ss_pred hCCCCCCceEeccchhHHHHHHHHHHHcCCCCCCCceeEE
Q 019519 162 AGTYNEKKLFGVTTLDVVRAKTFYAGKANVNVAEVNVPVV 201 (340)
Q Consensus 162 sg~~~~~kviG~~~ld~~R~~~~la~~l~v~~~~v~~~v~ 201 (340)
+ .|..-.++.+.-....+-+.++..++ +..|++..+
T Consensus 152 -~-~~~~~~Y~asKaal~~l~~~la~el~--~~gIrVn~i 187 (262)
T PRK07984 152 -A-IPNYNVMGLAKASLEANVRYMANAMG--PEGVRVNAI 187 (262)
T ss_pred -C-CCCcchhHHHHHHHHHHHHHHHHHhc--ccCcEEeee
Confidence 1 22222344433223346666777663 455655444
No 484
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=94.28 E-value=0.23 Score=39.39 Aligned_cols=93 Identities=16% Similarity=0.210 Sum_probs=56.3
Q ss_pred EEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCcc----ccccCCCCEEEEcCCC
Q 019519 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQL----GQALEDSDVVIIPAGV 106 (340)
Q Consensus 31 I~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~----~~al~~aDiVi~~ag~ 106 (340)
|.|+|. |.+|..++..|...+. +++++|.++.. ...+..... .-+.+. .+|. +..+++||.||++.+
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~--~vvvid~d~~~--~~~~~~~~~-~~i~gd--~~~~~~l~~a~i~~a~~vv~~~~- 71 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGI--DVVVIDRDPER--VEELREEGV-EVIYGD--ATDPEVLERAGIEKADAVVILTD- 71 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTS--EEEEEESSHHH--HHHHHHTTS-EEEES---TTSHHHHHHTTGGCESEEEEESS-
T ss_pred eEEEcC-CHHHHHHHHHHHhCCC--EEEEEECCcHH--HHHHHhccc-cccccc--chhhhHHhhcCccccCEEEEccC-
Confidence 679998 9999999999998664 89999988522 222232221 112211 1221 134689999998853
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecC
Q 019519 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 107 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN 146 (340)
|-..-..++..+++..|+..++...+
T Consensus 72 --------------~d~~n~~~~~~~r~~~~~~~ii~~~~ 97 (116)
T PF02254_consen 72 --------------DDEENLLIALLARELNPDIRIIARVN 97 (116)
T ss_dssp --------------SHHHHHHHHHHHHHHTTTSEEEEEES
T ss_pred --------------CHHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 22333445566677788776665543
No 485
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=94.28 E-value=0.33 Score=45.58 Aligned_cols=75 Identities=21% Similarity=0.267 Sum_probs=50.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc-------------------H--HHHHHHhcCCCCceEEEEe
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT-------------------P--GVAADVGHINTRSEVAGYM 85 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~-------------------~--~~~~dl~~~~~~~~v~~~~ 85 (340)
...||.|+|+ |.+|+.++..|+..|+ .+|.|+|.+.. + ..+..|.......+++...
T Consensus 18 ~~s~VLIvG~-gGLG~EiaKnLalaGV-g~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~ 95 (286)
T cd01491 18 QKSNVLISGL-GGLGVEIAKNLILAGV-KSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVST 95 (286)
T ss_pred hcCcEEEEcC-CHHHHHHHHHHHHcCC-CeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 3569999998 9999999999999886 68999997641 0 0111222222234555554
Q ss_pred cCCccccccCCCCEEEEcC
Q 019519 86 GNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 86 ~~~d~~~al~~aDiVi~~a 104 (340)
...+ ++.+.+.|+||.+.
T Consensus 96 ~~~~-~~~l~~fdvVV~~~ 113 (286)
T cd01491 96 GPLT-TDELLKFQVVVLTD 113 (286)
T ss_pred ccCC-HHHHhcCCEEEEec
Confidence 3222 46789999998885
No 486
>PRK06199 ornithine cyclodeaminase; Validated
Probab=94.26 E-value=0.15 Score=49.75 Aligned_cols=71 Identities=18% Similarity=0.275 Sum_probs=49.4
Q ss_pred CeEEEEcCCCChHHHHHHHHHh-CCCcceEEEEeCCC--cHHHHHHHhcCCCC-ceEEEEecCCccccccCCCCEEEEc
Q 019519 29 RKVAVLGAAGGIGQPLALLMKL-NPLVSRLALYDIAN--TPGVAADVGHINTR-SEVAGYMGNDQLGQALEDSDVVIIP 103 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~-~~~~~el~L~D~~~--~~~~~~dl~~~~~~-~~v~~~~~~~d~~~al~~aDiVi~~ 103 (340)
..++|+|+ |..+.+-+..++. .+.+.+|.++|.+. +...+.++.+.... ..+... .+.++++++||+|+.+
T Consensus 156 ~~l~iiG~-G~QA~~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~---~s~~eav~~ADIVvta 230 (379)
T PRK06199 156 KVVGLLGP-GVMGKTILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVV---DSIEEVVRGSDIVTYC 230 (379)
T ss_pred CEEEEECC-cHHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEe---CCHHHHHcCCCEEEEc
Confidence 59999997 9888777666555 33478999999987 34455556543211 135443 4678999999999975
No 487
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.23 E-value=0.33 Score=47.01 Aligned_cols=37 Identities=35% Similarity=0.575 Sum_probs=31.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
.+..||+|+|+ |.+|+.++..|+..|+ .+|.|+|.+.
T Consensus 26 L~~~~VlivG~-GGlGs~~a~~La~~Gv-g~i~lvD~D~ 62 (355)
T PRK05597 26 LFDAKVAVIGA-GGLGSPALLYLAGAGV-GHITIIDDDT 62 (355)
T ss_pred HhCCeEEEECC-CHHHHHHHHHHHHcCC-CeEEEEeCCE
Confidence 34569999998 9999999999998885 6899999874
No 488
>PRK07041 short chain dehydrogenase; Provisional
Probab=94.22 E-value=0.45 Score=42.20 Aligned_cols=107 Identities=18% Similarity=0.225 Sum_probs=60.1
Q ss_pred EEcCCCChHHHHHHHHHhCCCcceEEEEeCCCc--HHHHHHHhcCCCCceEEEEe-c---CCcccccc---CCCCEEEEc
Q 019519 33 VLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-G---NDQLGQAL---EDSDVVIIP 103 (340)
Q Consensus 33 IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~---~~d~~~al---~~aDiVi~~ 103 (340)
|+||+|.+|+.++..|+..+. +|++++.++. .....++.. . .++.... + ..++.+++ ...|++|+.
T Consensus 2 ItGas~~iG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~-~--~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ 76 (230)
T PRK07041 2 VVGGSSGIGLALARAFAAEGA--RVTIASRSRDRLAAAARALGG-G--APVRTAALDITDEAAVDAFFAEAGPFDHVVIT 76 (230)
T ss_pred eecCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhc-C--CceEEEEccCCCHHHHHHHHHhcCCCCEEEEC
Confidence 899999999999999999887 8999998742 222223321 1 1222211 1 11222333 347999999
Q ss_pred CCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 104 AGVPRKP---GMT---RDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 104 ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
+|..... ..+ -...+..|......+.+. ......+.+++++
T Consensus 77 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~-~~~~~~g~iv~~s 123 (230)
T PRK07041 77 AADTPGGPVRALPLAAAQAAMDSKFWGAYRVARA-ARIAPGGSLTFVS 123 (230)
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhh-hhhcCCeEEEEEC
Confidence 8864221 111 233455666666666662 2233445555544
No 489
>TIGR03736 PRTRC_ThiF PRTRC system ThiF family protein. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. This family is the PRTRC system ThiF family protein.
Probab=94.19 E-value=0.57 Score=42.96 Aligned_cols=37 Identities=22% Similarity=0.258 Sum_probs=30.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCC---------cceEEEEeCCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPL---------VSRLALYDIAN 64 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~---------~~el~L~D~~~ 64 (340)
++.||.|+|+ |-+|+.++..|+..++ ..+|+|+|-+.
T Consensus 10 ~~~~V~vvG~-GGlGs~v~~~Lar~G~a~~~~G~~~g~~i~lvD~D~ 55 (244)
T TIGR03736 10 RPVSVVLVGA-GGTGSQVIAGLARLHHALKALGHPGGLAVTVYDDDT 55 (244)
T ss_pred CCCeEEEEcC-ChHHHHHHHHHHHccccccccCCCCCCEEEEECCCE
Confidence 4579999998 9999999999987642 11999999864
No 490
>PF03059 NAS: Nicotianamine synthase protein; InterPro: IPR004298 Nicotianamine synthase 2.5.1.43 from EC catalyzes the trimerization of S-adenosylmethionine to yield one molecule of nicotianamine. Nicotianamine has an important role in plant iron uptake mechanisms. Plants adopt two strategies (termed I and II) of iron acquisition. Strategy I is adopted by all higher plants except graminaceous plants, which adopt strategy II [, ]. In strategy I plants, the role of nicotianamine is not fully determined: possible roles include the formation of more stable complexes with ferrous than with ferric ion, which might serve as a sensor of the physiological status of iron within a plant, or which might be involved in the transport of iron []. In strategy II (graminaceous) plants, nicotianamine is the key intermediate (and nicotianamine synthase the key enzyme) in the synthesis of the mugineic family (the only known family in plants) of phytosiderophores. Phytosiderophores are iron chelators whose secretion by the roots is greatly increased in instances of iron deficiency []. The 3D structures of five example NAS from Methanothermobacter thermautotrophicus reveal the monomer to consist of a five-helical bundle N-terminal domain on top of a classic Rossmann fold C-terminal domain. The N-terminal domain is unique to the NAS family, whereas the C-terminal domain is homologous to the class I family of SAM-dependent methyltransferases. An active site is created at the interface of the two domains, at the rim of a large cavity that corresponds to the nucleotide binding site such as is found in other proteins adopting a Rossmann fold [].; GO: 0030410 nicotianamine synthase activity, 0030418 nicotianamine biosynthetic process; PDB: 3O31_B 3FPH_A 3FPJ_A 3FPE_B 3FPF_B 3FPG_B.
Probab=94.19 E-value=0.25 Score=46.11 Aligned_cols=77 Identities=19% Similarity=0.188 Sum_probs=34.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC-cHHHHHHHhc--CCCCceEEEEec-CCccccccCCCCEEEEc
Q 019519 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-TPGVAADVGH--INTRSEVAGYMG-NDQLGQALEDSDVVIIP 103 (340)
Q Consensus 28 ~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~-~~~~~~dl~~--~~~~~~v~~~~~-~~d~~~al~~aDiVi~~ 103 (340)
+.||+.||. |.+-.+........+....++-+|+++ +...+..+-. .....++...++ ..+....+++.|+|+++
T Consensus 121 p~rVaFIGS-GPLPlT~i~la~~~~~~~~v~~iD~d~~A~~~a~~lv~~~~~L~~~m~f~~~d~~~~~~dl~~~DvV~lA 199 (276)
T PF03059_consen 121 PSRVAFIGS-GPLPLTSIVLAKQHGPGARVHNIDIDPEANELARRLVASDLGLSKRMSFITADVLDVTYDLKEYDVVFLA 199 (276)
T ss_dssp --EEEEE----SS-HHHHHHH--HTT--EEEEEESSHHHHHHHHHHHH---HH-SSEEEEES-GGGG-GG----SEEEE-
T ss_pred cceEEEEcC-CCcchHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhcccccCCeEEEecchhccccccccCCEEEEh
Confidence 359999996 988777654443333334788999987 3333333322 111234444432 12333457899999998
Q ss_pred CC
Q 019519 104 AG 105 (340)
Q Consensus 104 ag 105 (340)
+-
T Consensus 200 al 201 (276)
T PF03059_consen 200 AL 201 (276)
T ss_dssp TT
T ss_pred hh
Confidence 74
No 491
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.16 E-value=2.3 Score=40.04 Aligned_cols=36 Identities=17% Similarity=0.221 Sum_probs=31.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCC
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIA 63 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~ 63 (340)
++.+.+.|+||++.+|..++..|+..|. .|++.+.+
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~G~--~Vv~~~r~ 41 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAAGA--TVYVTGRS 41 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecc
Confidence 3456889999988999999999998887 89999876
No 492
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=94.15 E-value=0.79 Score=40.93 Aligned_cols=30 Identities=30% Similarity=0.424 Sum_probs=25.8
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEE
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALY 60 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~ 60 (340)
..+.|+||+|++|++++..|+..+. ++++.
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~--~v~~~ 31 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGY--TVAVN 31 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEE
Confidence 3689999999999999999998886 77664
No 493
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=94.11 E-value=0.49 Score=37.16 Aligned_cols=64 Identities=14% Similarity=0.179 Sum_probs=43.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag 105 (340)
+..+|.|||+ |.+|..-+..|+..+- ++.++.... .. ... .++... ..+++.++++|+|+.+.+
T Consensus 6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA--~v~vis~~~---~~--~~~-----~i~~~~--~~~~~~l~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGG-GPVAARKARLLLEAGA--KVTVISPEI---EF--SEG-----LIQLIR--REFEEDLDGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEE-SHHHHHHHHHHCCCTB--EEEEEESSE---HH--HHT-----SCEEEE--SS-GGGCTTESEEEE-SS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCch---hh--hhh-----HHHHHh--hhHHHHHhhheEEEecCC
Confidence 3569999998 9999999999998885 999998753 11 111 222221 234677999999998753
No 494
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=94.10 E-value=0.34 Score=46.35 Aligned_cols=98 Identities=27% Similarity=0.360 Sum_probs=60.7
Q ss_pred CCCCCCCCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEE
Q 019519 21 YSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVV 100 (340)
Q Consensus 21 ~~~~~~~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiV 100 (340)
+.+.....++++|+|. |.+|+.+|..+. ++.-+|+.+|..+.. ...+.. .... .++++.++.||+|
T Consensus 139 ~~~~~l~gktvGIiG~-GrIG~avA~r~~--~Fgm~v~y~~~~~~~-~~~~~~------~~~y----~~l~ell~~sDii 204 (324)
T COG1052 139 LLGFDLRGKTLGIIGL-GRIGQAVARRLK--GFGMKVLYYDRSPNP-EAEKEL------GARY----VDLDELLAESDII 204 (324)
T ss_pred ccccCCCCCEEEEECC-CHHHHHHHHHHh--cCCCEEEEECCCCCh-HHHhhc------Ccee----ccHHHHHHhCCEE
Confidence 3444456689999998 999999999888 555599999987531 111111 1122 1257889999999
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Q 019519 101 IIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (340)
Q Consensus 101 i~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 145 (340)
++..-.. + +++. .-|. +.++...|.+++||.+
T Consensus 205 ~l~~Plt--~-~T~h---Lin~-------~~l~~mk~ga~lVNta 236 (324)
T COG1052 205 SLHCPLT--P-ETRH---LINA-------EELAKMKPGAILVNTA 236 (324)
T ss_pred EEeCCCC--h-HHhh---hcCH-------HHHHhCCCCeEEEECC
Confidence 9975221 1 1111 1121 2344445788888764
No 495
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=94.10 E-value=0.13 Score=49.20 Aligned_cols=70 Identities=20% Similarity=0.301 Sum_probs=50.0
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEc
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIP 103 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ 103 (340)
..++|||+ |..+..-+..+..--.+.+|.++|.++ .+..+.++...... .+... ++.++++++||+|+.+
T Consensus 131 ~~laiIGa-G~qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~-~v~a~---~s~~~av~~aDiIvt~ 202 (330)
T COG2423 131 STLAIIGA-GAQARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGE-AVGAA---DSAEEAVEGADIVVTA 202 (330)
T ss_pred cEEEEECC-cHHHHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCc-cceec---cCHHHHhhcCCEEEEe
Confidence 48999997 988777666665544578999999987 45555566554421 24332 4668999999999986
No 496
>PLN02306 hydroxypyruvate reductase
Probab=94.06 E-value=0.35 Score=47.41 Aligned_cols=102 Identities=19% Similarity=0.269 Sum_probs=58.7
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHH-hCCCcceEEEEeCCCcHHHH---HHHhc----CCC-CceEEEEecCCccccccCC
Q 019519 26 VPDRKVAVLGAAGGIGQPLALLMK-LNPLVSRLALYDIANTPGVA---ADVGH----INT-RSEVAGYMGNDQLGQALED 96 (340)
Q Consensus 26 ~~~~KI~IiGaaG~VG~~~a~~l~-~~~~~~el~L~D~~~~~~~~---~dl~~----~~~-~~~v~~~~~~~d~~~al~~ 96 (340)
....+|+|+|. |.+|+.+|..+. .-|. +|..||........ ..+.. ... ...+.. ..++++.++.
T Consensus 163 L~gktvGIiG~-G~IG~~vA~~l~~~fGm--~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~L~ell~~ 236 (386)
T PLN02306 163 LKGQTVGVIGA-GRIGSAYARMMVEGFKM--NLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKR---ASSMEEVLRE 236 (386)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCCC--EEEEECCCCchhhhhhhhhhcccccccccccccccc---cCCHHHHHhh
Confidence 45679999998 999999998874 3344 89999976421111 01110 000 011111 1467899999
Q ss_pred CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecC
Q 019519 97 SDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (340)
Q Consensus 97 aDiVi~~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN 146 (340)
||+|++.. |..+ .+-.++- .+.++...|++++||++=
T Consensus 237 sDiV~lh~--Plt~---------~T~~lin--~~~l~~MK~ga~lIN~aR 273 (386)
T PLN02306 237 ADVISLHP--VLDK---------TTYHLIN--KERLALMKKEAVLVNASR 273 (386)
T ss_pred CCEEEEeC--CCCh---------hhhhhcC--HHHHHhCCCCeEEEECCC
Confidence 99999964 2211 1111111 123334457899998863
No 497
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=94.05 E-value=0.11 Score=47.26 Aligned_cols=74 Identities=15% Similarity=0.115 Sum_probs=47.3
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCCC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVP 107 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~~ 107 (340)
|+|.|+||+|++|++++..|+..+. +++..-.+...... +. ...............+..+++|.|.++++.+..
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~--~v~~~~r~~~~~~~--~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~ 74 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGH--EVRAAVRNPEAAAA--LA-GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLL 74 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCC--EEEEEEeCHHHHHh--hc-CCcEEEEeccCCHhHHHHHhccccEEEEEeccc
Confidence 5899999999999999999998876 66666554322222 22 111111111112234567889999999987543
No 498
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=94.02 E-value=0.37 Score=47.50 Aligned_cols=91 Identities=19% Similarity=0.237 Sum_probs=57.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCCcHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcCCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~ag~ 106 (340)
...+|+|+|. |.+|..++..+...+. +|+.+|.++.+.... ..+ .+ .+ .+++++++++|+||.+.|.
T Consensus 194 ~Gk~VvViG~-G~IG~~vA~~ak~~Ga--~ViV~d~dp~r~~~A-~~~-G~--~v------~~leeal~~aDVVItaTG~ 260 (406)
T TIGR00936 194 AGKTVVVAGY-GWCGKGIAMRARGMGA--RVIVTEVDPIRALEA-AMD-GF--RV------MTMEEAAKIGDIFITATGN 260 (406)
T ss_pred CcCEEEEECC-CHHHHHHHHHHhhCcC--EEEEEeCChhhHHHH-Hhc-CC--Ee------CCHHHHHhcCCEEEECCCC
Confidence 3469999998 9999999998887776 899999876322111 111 11 11 1235678999999987542
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCC
Q 019519 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNP 147 (340)
Q Consensus 107 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP 147 (340)
..++.. +.+....+.+++++++-+
T Consensus 261 ---------------~~vI~~--~~~~~mK~GailiN~G~~ 284 (406)
T TIGR00936 261 ---------------KDVIRG--EHFENMKDGAIVANIGHF 284 (406)
T ss_pred ---------------HHHHHH--HHHhcCCCCcEEEEECCC
Confidence 222221 122333467888888765
No 499
>PRK06046 alanine dehydrogenase; Validated
Probab=94.02 E-value=0.18 Score=48.18 Aligned_cols=70 Identities=14% Similarity=0.296 Sum_probs=47.9
Q ss_pred CeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC--cHHHHHHHhcCCCCceEEEEecCCccccccCCCCEEEEcC
Q 019519 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (340)
Q Consensus 29 ~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDiVi~~a 104 (340)
.+|+|+|+ |..|...+..+.....+.++.++|.+. .+..+.++.+. ....+..+ +|++++++ +|+|+++-
T Consensus 130 ~~vgiiG~-G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~-~~~~v~~~---~~~~~~l~-aDiVv~aT 201 (326)
T PRK06046 130 KVVGIIGA-GNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSV-VGCDVTVA---EDIEEACD-CDILVTTT 201 (326)
T ss_pred CEEEEECC-cHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhh-cCceEEEe---CCHHHHhh-CCEEEEec
Confidence 59999997 999988887776555678999999986 23334444322 12234433 46677776 99999863
No 500
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=94.01 E-value=0.35 Score=47.48 Aligned_cols=36 Identities=28% Similarity=0.572 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhCCCcceEEEEeCCC
Q 019519 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (340)
Q Consensus 27 ~~~KI~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~ 64 (340)
+..||.|+|+ |.+|+.++..|+..|+ .+|.|+|-+.
T Consensus 41 ~~~~VlviG~-GGlGs~va~~La~~Gv-g~i~lvD~D~ 76 (392)
T PRK07878 41 KNARVLVIGA-GGLGSPTLLYLAAAGV-GTLGIVEFDV 76 (392)
T ss_pred hcCCEEEECC-CHHHHHHHHHHHHcCC-CeEEEECCCE
Confidence 4569999998 9999999999998885 5899999764
Done!