BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019521
(340 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3FJO|A Chain A, Structure Of Chimeric Yh Cpr
Length = 637
Score = 197 bits (501), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 177/322 (54%), Gaps = 16/322 (4%)
Query: 28 VPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQ 85
P RT + +D+T+ PR ++ +A+ E+E L+ AS EG++ +
Sbjct: 323 CPTSYRTALTYYLDITN-PPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVV 381
Query: 86 KERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTP 145
+ RR +L +L+D PS++ PID L +L+P L+ R +SI+SS HPN VH+ VV + T
Sbjct: 382 EARRHILAILQDCPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETK 441
Query: 146 YKRKRTGLCSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFR 200
R G+ + WL +P + G +P + +K P + P+I++GPGTG APF
Sbjct: 442 AGRINKGVATNWLRAKEPAGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFI 501
Query: 201 GFVEERA-IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAF 258
GF++ERA ++ + ++GCR D D+LYRE L+ DG ++ VAF
Sbjct: 502 GFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYRE-ELAQFHRDGALTQ-----LNVAF 555
Query: 259 SRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASR 318
SR+Q KVYVQH + + + +W L+ A IYV G A M DV +TF +IV++ G
Sbjct: 556 SREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEH 615
Query: 319 DSAANWLKALQRAGRYHVEAWS 340
A +++K L GRY ++ WS
Sbjct: 616 AQAVDYIKKLMTKGRYSLDVWS 637
>pdb|3QFS|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase
(FadNADPH Domain)
Length = 458
Score = 197 bits (501), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 177/322 (54%), Gaps = 16/322 (4%)
Query: 28 VPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQ 85
P RT + +D+T+ PR ++ +A+ E+E L+ AS EG++ +
Sbjct: 144 CPTSYRTALTYYLDITNP-PRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVV 202
Query: 86 KERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTP 145
+ RR +L +L+D PS++ PID L +L+P L+ R +SI+SS HPN VH+ VV + T
Sbjct: 203 EARRHILAILQDCPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETK 262
Query: 146 YKRKRTGLCSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFR 200
R G+ + WL +P + G +P + +K P + P+I++GPGTG APF
Sbjct: 263 AGRINKGVATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFI 322
Query: 201 GFVEERA-IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAF 258
GF++ERA ++ + ++GCR D D+LYRE L+ DG ++ VAF
Sbjct: 323 GFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYRE-ELAQFHRDGALTQ-----LNVAF 376
Query: 259 SRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASR 318
SR+Q KVYVQH + + + +W L+ A IYV G A M DV +TF +IV++ G
Sbjct: 377 SREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEH 436
Query: 319 DSAANWLKALQRAGRYHVEAWS 340
A +++K L GRY ++ WS
Sbjct: 437 AQAVDYIKKLMTKGRYSLDVWS 458
>pdb|3QE2|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
pdb|3QE2|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
Length = 618
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 177/322 (54%), Gaps = 16/322 (4%)
Query: 28 VPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQ 85
P RT + +D+T+ PR ++ +A+ E+E L+ AS EG++ +
Sbjct: 304 CPTSYRTALTYYLDITNP-PRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVV 362
Query: 86 KERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTP 145
+ RR +L +L+D PS++ PID L +L+P L+ R +SI+SS HPN VH+ VV + T
Sbjct: 363 EARRHILAILQDCPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETK 422
Query: 146 YKRKRTGLCSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFR 200
R G+ + WL +P + G +P + +K P + P+I++GPGTG APF
Sbjct: 423 AGRINKGVATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFI 482
Query: 201 GFVEERA-IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAF 258
GF++ERA ++ + ++GCR D D+LYRE L+ DG ++ VAF
Sbjct: 483 GFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYRE-ELAQFHRDGALTQ-----LNVAF 536
Query: 259 SRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASR 318
SR+Q KVYVQH + + + +W L+ A IYV G A M DV +TF +IV++ G
Sbjct: 537 SREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEH 596
Query: 319 DSAANWLKALQRAGRYHVEAWS 340
A +++K L GRY ++ WS
Sbjct: 597 AQAVDYIKKLMTKGRYSLDVWS 618
>pdb|3QFC|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 (V492e
Mutant)
pdb|3QFC|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 (V492e
Mutant)
Length = 618
Score = 195 bits (496), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 176/322 (54%), Gaps = 16/322 (4%)
Query: 28 VPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQ 85
P RT + +D+T+ PR ++ +A+ E+E L+ AS EG++ +
Sbjct: 304 CPTSYRTALTYYLDITNP-PRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVV 362
Query: 86 KERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTP 145
+ RR +L +L+D PS++ PID L +L+P L+ R +SI+SS HPN VH+ VV + T
Sbjct: 363 EARRHILAILQDCPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETK 422
Query: 146 YKRKRTGLCSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFR 200
R G + WL +P + G +P + +K P + P+I++GPGTG APF
Sbjct: 423 AGRINKGEATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFI 482
Query: 201 GFVEERA-IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAF 258
GF++ERA ++ + ++GCR D D+LYRE L+ DG ++ VAF
Sbjct: 483 GFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYRE-ELAQFHRDGALTQ-----LNVAF 536
Query: 259 SRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASR 318
SR+Q KVYVQH + + + +W L+ A IYV G A M DV +TF +IV++ G
Sbjct: 537 SREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEH 596
Query: 319 DSAANWLKALQRAGRYHVEAWS 340
A +++K L GRY ++ WS
Sbjct: 597 AQAVDYIKKLMTKGRYSLDVWS 618
>pdb|3QFT|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase
(FadNADPH DOMAIN And R457h Mutant)
Length = 458
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 176/322 (54%), Gaps = 16/322 (4%)
Query: 28 VPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQ 85
P RT + +D+T+ PR ++ +A+ E+E L+ AS EG++ +
Sbjct: 144 CPTSYRTALTYYLDITNP-PRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVV 202
Query: 86 KERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTP 145
+ RR +L +L+D PS++ PID L +L+P L+ +SI+SS HPN VH+ VV + T
Sbjct: 203 EARRHILAILQDCPSLRPPIDHLCELLPRLQAHYYSIASSSKVHPNSVHICAVVVEYETK 262
Query: 146 YKRKRTGLCSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFR 200
R G+ + WL +P + G +P + +K P + P+I++GPGTG APF
Sbjct: 263 AGRINKGVATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFI 322
Query: 201 GFVEERA-IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAF 258
GF++ERA ++ + ++GCR D D+LYRE L+ DG ++ VAF
Sbjct: 323 GFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYRE-ELAQFHRDGALTQ-----LNVAF 376
Query: 259 SRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASR 318
SR+Q KVYVQH + + + +W L+ A IYV G A M DV +TF +IV++ G
Sbjct: 377 SREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEH 436
Query: 319 DSAANWLKALQRAGRYHVEAWS 340
A +++K L GRY ++ WS
Sbjct: 437 AQAVDYIKKLMTKGRYSLDVWS 458
>pdb|3QFR|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
(R457h Mutant)
pdb|3QFR|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
(R457h Mutant)
Length = 618
Score = 194 bits (493), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 176/322 (54%), Gaps = 16/322 (4%)
Query: 28 VPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQ 85
P RT + +D+T+ PR ++ +A+ E+E L+ AS EG++ +
Sbjct: 304 CPTSYRTALTYYLDITNP-PRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVV 362
Query: 86 KERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTP 145
+ RR +L +L+D PS++ PID L +L+P L+ +SI+SS HPN VH+ VV + T
Sbjct: 363 EARRHILAILQDCPSLRPPIDHLCELLPRLQAHYYSIASSSKVHPNSVHICAVVVEYETK 422
Query: 146 YKRKRTGLCSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFR 200
R G+ + WL +P + G +P + +K P + P+I++GPGTG APF
Sbjct: 423 AGRINKGVATNWLRAKEPAGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFI 482
Query: 201 GFVEERA-IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAF 258
GF++ERA ++ + ++GCR D D+LYRE L+ DG ++ VAF
Sbjct: 483 GFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYRE-ELAQFHRDGALTQ-----LNVAF 536
Query: 259 SRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASR 318
SR+Q KVYVQH + + + +W L+ A IYV G A M DV +TF +IV++ G
Sbjct: 537 SREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEH 596
Query: 319 DSAANWLKALQRAGRYHVEAWS 340
A +++K L GRY ++ WS
Sbjct: 597 AQAVDYIKKLMTKGRYSLDVWS 618
>pdb|1AMO|A Chain A, Three-Dimensional Structure Of Nadph-Cytochrome P450
Reductase: Prototype For Fmn-And Fad-Containing Enzymes
pdb|1AMO|B Chain B, Three-Dimensional Structure Of Nadph-Cytochrome P450
Reductase: Prototype For Fmn-And Fad-Containing Enzymes
Length = 615
Score = 189 bits (481), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 174/323 (53%), Gaps = 17/323 (5%)
Query: 28 VPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQ 85
P RT + +D+T+ PR ++ +A+ E+E L AS EG++ +
Sbjct: 300 CPTTYRTALTYYLDITNP-PRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVV 358
Query: 86 KERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTP 145
+ RR +L +L+D+PS++ PID L +L+P L+ R +SI+SS HPN VH+ V +
Sbjct: 359 EARRHILAILQDYPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVAVEYEAK 418
Query: 146 YKRKRTGLCSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFR 200
R G+ + WL +P + G +P + +K P + P+I++GPGTG APF
Sbjct: 419 SGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGTGIAPFM 478
Query: 201 GFVEERA-IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAF 258
GF++ERA ++ + ++GCR D D+LYRE L+ DG ++ VAF
Sbjct: 479 GFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYRE-ELARFHKDGALTQ-----LNVAF 532
Query: 259 SRKQPQKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEAS 317
SR+Q KVYVQH + + +W L+ A IYV G A M DV +TF +IV++ G
Sbjct: 533 SREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPME 592
Query: 318 RDSAANWLKALQRAGRYHVEAWS 340
A +++K L GRY ++ WS
Sbjct: 593 HTQAVDYVKKLMTKGRYSLDVWS 615
>pdb|3ES9|A Chain A, Nadph-Cytochrome P450 Reductase In An Open Conformation
pdb|3ES9|B Chain B, Nadph-Cytochrome P450 Reductase In An Open Conformation
pdb|3ES9|C Chain C, Nadph-Cytochrome P450 Reductase In An Open Conformation
Length = 618
Score = 189 bits (481), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 174/323 (53%), Gaps = 17/323 (5%)
Query: 28 VPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQ 85
P RT + +D+T+ PR ++ +A+ E+E L AS EG++ +
Sbjct: 303 CPTTYRTALTYYLDITNP-PRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVV 361
Query: 86 KERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTP 145
+ RR +L +L+D+PS++ PID L +L+P L+ R +SI+SS HPN VH+ V +
Sbjct: 362 EARRHILAILQDYPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVAVEYEAK 421
Query: 146 YKRKRTGLCSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFR 200
R G+ + WL +P + G +P + +K P + P+I++GPGTG APF
Sbjct: 422 SGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGTGIAPFM 481
Query: 201 GFVEERA-IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAF 258
GF++ERA ++ + ++GCR D D+LYRE L+ DG ++ VAF
Sbjct: 482 GFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYRE-ELARFHKDGALTQ-----LNVAF 535
Query: 259 SRKQPQKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEAS 317
SR+Q KVYVQH + + +W L+ A IYV G A M DV +TF +IV++ G
Sbjct: 536 SREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPME 595
Query: 318 RDSAANWLKALQRAGRYHVEAWS 340
A +++K L GRY ++ WS
Sbjct: 596 HTQAVDYVKKLMTKGRYSLDVWS 618
>pdb|1JA1|A Chain A, Cypor-Triple Mutant
pdb|1JA1|B Chain B, Cypor-Triple Mutant
Length = 622
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 174/323 (53%), Gaps = 17/323 (5%)
Query: 28 VPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQ 85
P RT + +D+T+ PR ++ +A+ E+E L AS EG++ +
Sbjct: 307 CPTTYRTALTYYLDITN-PPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVV 365
Query: 86 KERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTP 145
+ RR +L +L+D+PS++ PID L +L+P L+ R ++I+SS HPN VH+ V +
Sbjct: 366 EARRHILAILQDYPSLRPPIDHLCELLPRLQARYYAIASSSKVHPNSVHICAVAVEYEAK 425
Query: 146 YKRKRTGLCSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFR 200
R G+ + WL +P + G +P + +K P + P+I++GPGTG APF
Sbjct: 426 SGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGTGIAPFM 485
Query: 201 GFVEERA-IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAF 258
GF++ERA ++ + ++GCR D D+LYRE L+ DG ++ VAF
Sbjct: 486 GFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYRE-ELARFHKDGALTQ-----LNVAF 539
Query: 259 SRKQPQKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEAS 317
SR+Q KVYVQH + + +W L+ A IYVAG A M DV +TF +IV++ G
Sbjct: 540 SREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYVAGDARNMAKDVQNTFYDIVAEFGPME 599
Query: 318 RDSAANWLKALQRAGRYHVEAWS 340
A +++K L GRY + WS
Sbjct: 600 HTQAVDYVKKLMTKGRYSLNVWS 622
>pdb|3OJW|A Chain A, Disulfide Crosslinked Cytochrome P450 Reductase Inactive
pdb|3OJX|A Chain A, Disulfide Crosslinked Cytochrome P450 Reductase Inactive
Length = 622
Score = 187 bits (474), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 174/323 (53%), Gaps = 17/323 (5%)
Query: 28 VPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQ 85
P RT + +D+T+ PR ++ +A+ E+E L AS EG++ +
Sbjct: 307 TPTTYRTALTYYLDITN-PPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVV 365
Query: 86 KERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTP 145
+ RR +L +L+D+PS++ PID L++L+P L+ R +SI+SS HPN VH+T V +
Sbjct: 366 EARRHILAILQDYPSLRPPIDHLLELLPRLQARYYSIASSSKVHPNSVHITAVAVEYEAK 425
Query: 146 YKRKRTGLCSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFR 200
R G+ + WL +P + G +P + K P + P+I++GPGTG APF
Sbjct: 426 SGRVNKGVATSWLRAKEPAGENGGRALVPMFVCKSQFRLPFKSTTPVIMVGPGTGIAPFM 485
Query: 201 GFVEERA-IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAF 258
GF++ERA ++ + ++G R D D+LYRE L+ DG ++ VAF
Sbjct: 486 GFIQERAWLREQGKEVGETLLYYGARRSDEDYLYRE-ELARFHKDGALTQ-----LNVAF 539
Query: 259 SRKQPQKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEAS 317
SR+Q KVYVQH + + +W L+ A IYV G A M DV +TF +IV++ G
Sbjct: 540 SREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPME 599
Query: 318 RDSAANWLKALQRAGRYHVEAWS 340
A +++K L GRY ++ WS
Sbjct: 600 HTQAVDYVKKLMTKGRYSLDVWS 622
>pdb|1J9Z|A Chain A, Cypor-W677g
pdb|1J9Z|B Chain B, Cypor-W677g
Length = 622
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/323 (34%), Positives = 173/323 (53%), Gaps = 17/323 (5%)
Query: 28 VPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQ 85
P RT + +D+T+ PR ++ +A+ E+E L AS EG++ +
Sbjct: 307 CPTTYRTALTYYLDITNP-PRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVV 365
Query: 86 KERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTP 145
+ RR +L +L+D+PS++ PID L +L+P L+ R +SI+SS HPN VH+ V +
Sbjct: 366 EARRHILAILQDYPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVAVEYEAK 425
Query: 146 YKRKRTGLCSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFR 200
R G+ + WL +P + G +P + +K P + P+I++GPGTG APF
Sbjct: 426 SGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGTGIAPFM 485
Query: 201 GFVEERA-IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAF 258
GF++ERA ++ + ++GCR D D+LYRE L+ DG ++ VAF
Sbjct: 486 GFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYRE-ELARFHKDGALTQ-----LNVAF 539
Query: 259 SRKQPQKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEAS 317
SR+Q KVYVQH + + +W L+ A IYV G A M DV +TF +IV++ G
Sbjct: 540 SREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPME 599
Query: 318 RDSAANWLKALQRAGRYHVEAWS 340
A +++K L GRY ++ S
Sbjct: 600 HTQAVDYVKKLMTKGRYSLDVGS 622
>pdb|1JA0|A Chain A, Cypor-W677x
pdb|1JA0|B Chain B, Cypor-W677x
Length = 620
Score = 184 bits (468), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 172/320 (53%), Gaps = 17/320 (5%)
Query: 28 VPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQ 85
P RT + +D+T+ PR ++ +A+ E+E L AS EG++ +
Sbjct: 307 CPTTYRTALTYYLDITNP-PRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVV 365
Query: 86 KERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTP 145
+ RR +L +L+D+PS++ PID L +L+P L+ R +SI+SS HPN VH+ V +
Sbjct: 366 EARRHILAILQDYPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVAVEYEAK 425
Query: 146 YKRKRTGLCSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFR 200
R G+ + WL +P + G +P + +K P + P+I++GPGTG APF
Sbjct: 426 SGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGTGIAPFM 485
Query: 201 GFVEERA-IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAF 258
GF++ERA ++ + ++GCR D D+LYRE L+ DG ++ VAF
Sbjct: 486 GFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYRE-ELARFHKDGALTQ-----LNVAF 539
Query: 259 SRKQPQKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEAS 317
SR+Q KVYVQH + + +W L+ A IYV G A M DV +TF +IV++ G
Sbjct: 540 SREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPME 599
Query: 318 RDSAANWLKALQRAGRYHVE 337
A +++K L GRY ++
Sbjct: 600 HTQAVDYVKKLMTKGRYSLD 619
>pdb|1TLL|A Chain A, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
Reductase Module At 2.3 A Resolution.
pdb|1TLL|B Chain B, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
Reductase Module At 2.3 A Resolution
Length = 688
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/309 (36%), Positives = 172/309 (55%), Gaps = 28/309 (9%)
Query: 40 MDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFP 99
+D+T+ P + + AT E EK+RL + +G + ++ + T++EVLE+FP
Sbjct: 357 LDITTP-PTPLQLQQFASLATNEKEKQRLLVLS--KGLQEYEEWKWGKNPTMVEVLEEFP 413
Query: 100 SVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRK--RTGLCSVW 157
S+QMP L+ + L+ R +SISSSP +P++VHLTV++VS+ T G+CS W
Sbjct: 414 SIQMPATLLLTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSW 473
Query: 158 LAGLDPQQGIYIPAWFQKGS----LPRPPPSVPLILIGPGTGCAPFRGFVEERA--IQSS 211
L + Q +P F +G+ LPR P VP IL+GPGTG APFR F ++R IQ
Sbjct: 474 LNRI--QADDVVPC-FVRGAPSFHLPR-NPQVPCILVGPGTGIAPFRSFWQQRQFDIQHK 529
Query: 212 SGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRK--QPQKVYV 268
P++ FGCR D +YRE L + N GVF E Y A+SR+ +P+K YV
Sbjct: 530 GMNPCPMVLVFGCRQSKIDHIYREETL-QAKNKGVFRE-----LYTAYSREPDRPKK-YV 582
Query: 269 QHKMLEQ-SQRIWNLLLSKAS-IYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLK 326
Q + EQ ++ ++ L + IYV G T M +DV + I++++G+ S + A ++
Sbjct: 583 QDVLQEQLAESVYRALKEQGGHIYVCGDVT-MAADVLKAIQRIMTQQGKLSEEDAGVFIS 641
Query: 327 ALQRAGRYH 335
L+ RYH
Sbjct: 642 RLRDDNRYH 650
>pdb|1F20|A Chain A, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
FadNADP+ Domain At 1.9a Resolution
Length = 435
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/309 (36%), Positives = 172/309 (55%), Gaps = 28/309 (9%)
Query: 40 MDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFP 99
+D+T+ P + + AT E EK+RL + +G + ++ + T++EVLE+FP
Sbjct: 136 LDITTP-PTPLQLQQFASLATNEKEKQRLLVLS--KGLQEYEEWKWGKNPTMVEVLEEFP 192
Query: 100 SVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRK--RTGLCSVW 157
S+QMP L+ + L+ R +SISSSP +P++VHLTV++VS+ T G+CS W
Sbjct: 193 SIQMPATLLLTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSW 252
Query: 158 LAGLDPQQGIYIPAWFQKGS----LPRPPPSVPLILIGPGTGCAPFRGFVEERA--IQSS 211
L + Q +P F +G+ LPR P VP IL+GPGTG APFR F ++R IQ
Sbjct: 253 LNRI--QADDVVPC-FVRGAPSFHLPR-NPQVPCILVGPGTGIAPFRSFWQQRQFDIQHK 308
Query: 212 SGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRK--QPQKVYV 268
P++ FGCR D +YRE L + N GVF E Y A+SR+ +P+K YV
Sbjct: 309 GMNPCPMVLVFGCRQSKIDHIYREETL-QAKNKGVFRE-----LYTAYSREPDRPKK-YV 361
Query: 269 QHKMLEQ-SQRIWNLLLSKAS-IYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLK 326
Q + EQ ++ ++ L + IYV G T M +DV + I++++G+ S + A ++
Sbjct: 362 QDVLQEQLAESVYRALKEQGGHIYVCGDVT-MAADVLKAIQRIMTQQGKLSEEDAGVFIS 420
Query: 327 ALQRAGRYH 335
L+ RYH
Sbjct: 421 RLRDDNRYH 429
>pdb|2QTZ|A Chain A, Crystal Structure Of The Nadp+-Bound Fad-Containing
Fnr-Like Module Of Human Methionine Synthase Reductase
Length = 539
Score = 144 bits (364), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 158/329 (48%), Gaps = 41/329 (12%)
Query: 45 ASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSVQMP 104
A P++ F + + + EK RLQ S +G D ++ + +L++L FPS Q P
Sbjct: 219 AIPKKAFLRALVDYTSDSAEKRRLQELCSKQGAADYSRFVRDAXACLLDLLLAFPSCQPP 278
Query: 105 IDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSW--TTPYKRKRTGLCSVWLA--- 159
+ L++ +P L+ R +S +SS L HP ++H ++V + T + R G+C+ WLA
Sbjct: 279 LSLLLEHLPKLQPRPYSCASSSLFHPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLV 338
Query: 160 -----------------GLDPQQGIYIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGF 202
L P+ I+ P LP PS+P+I++GPGTG APF GF
Sbjct: 339 ASVLQPNIHASHEDSGKALAPKISIF-PRTTNSFHLPD-DPSIPIIMVGPGTGIAPFIGF 396
Query: 203 VEERAI---QSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAF 258
++ R Q G + FFGCR++D D+L+R+ L H L G+ + K V+F
Sbjct: 397 LQHREKLQEQHPDGNFGAMWLFFGCRHKDRDYLFRK-ELRHFLKHGILTHLK-----VSF 450
Query: 259 SRKQP------QKVYVQHKMLEQSQRIWNLLLSK-ASIYVAGSATKMPSDVWSTFEEIVS 311
SR P YVQ + Q++ +LL + IYV G A M DV +I+S
Sbjct: 451 SRDAPVGEEEAPAKYVQDNIQLHGQQVARILLQENGHIYVCGDAKNMAKDVHDALVQIIS 510
Query: 312 KEGEASRDSAANWLKALQRAGRYHVEAWS 340
KE + A L L+ RY + WS
Sbjct: 511 KEVGVEKLEAMKTLATLKEEKRYLQDIWS 539
>pdb|2QTL|A Chain A, Crystal Structure Of The Fad-Containing Fnr-Like Module Of
Human Methionine Synthase Reductase
Length = 539
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 158/329 (48%), Gaps = 41/329 (12%)
Query: 45 ASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSVQMP 104
A P++ F + + + EK RLQ S +G D ++ + +L++L FPS Q P
Sbjct: 219 AIPKKAFLRALVDYTSDSAEKRRLQELCSKQGAADYSRFVRDAXACLLDLLLAFPSCQPP 278
Query: 105 IDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSW--TTPYKRKRTGLCSVWLA--- 159
+ L++ +P L+ R +S +SS L HP ++H ++V + T + R G+C+ WLA
Sbjct: 279 LSLLLEHLPKLQPRPYSCASSSLFHPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLV 338
Query: 160 -----------------GLDPQQGIYIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGF 202
L P+ I+ P LP PS+P+I++GPGTG APF GF
Sbjct: 339 ASVLQPNIHASHEDSGKALAPKISIF-PRTTNSFHLPD-DPSIPIIMVGPGTGIAPFIGF 396
Query: 203 VEERAI---QSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAF 258
++ R Q G + FFGCR++D D+L+R+ L H L G+ + K V+F
Sbjct: 397 LQHREKLQEQHPDGNFGAMWLFFGCRHKDRDYLFRK-ELRHFLKHGILTHLK-----VSF 450
Query: 259 SRKQP------QKVYVQHKMLEQSQRIWNLLLSK-ASIYVAGSATKMPSDVWSTFEEIVS 311
SR P YVQ + Q++ +LL + IYV G A M DV +I+S
Sbjct: 451 SRDAPVGEEEAPAKYVQDNIQLHGQQVARILLQENGHIYVCGDAKNMAKDVHDALVQIIS 510
Query: 312 KEGEASRDSAANWLKALQRAGRYHVEAWS 340
KE + A L L+ RY + WS
Sbjct: 511 KEVGVEKLEAMKTLATLKEEKRYLQDIWS 539
>pdb|4DQL|A Chain A, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3 In Complex With Nadp+
pdb|4DQL|B Chain B, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3 In Complex With Nadp+
Length = 393
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 146/265 (55%), Gaps = 24/265 (9%)
Query: 87 ERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVS---WT 143
+R T+LE+LE +P+ +M + L+P ++ R +SISSSP Q +TVSVVS W+
Sbjct: 141 KRLTMLELLEKYPACEMKFSEFIALLPSIRPRYYSISSSPRVDEKQASITVSVVSGEAWS 200
Query: 144 TPYKRKRTGLCSVWLAGLDPQQGIYIPAWF----QKGSLPRPPPSVPLILIGPGTGCAPF 199
+ K G+ S +LA L Q+G I + + +LP+ P + PLI++GPGTG APF
Sbjct: 201 GYGEYK--GIASNYLAEL--QEGDTITCFISTPQSEFTLPKDPET-PLIMVGPGTGVAPF 255
Query: 200 RGFVEERAIQSSSGPA-APIIFFFGCRN-EDDFLYRELWLSHSLNDGVFSEAKGGGFYVA 257
RGFV+ R G + +FGCR+ +D+LY+E L ++ ++G+ + + A
Sbjct: 256 RGFVQARKQLKEQGQSLGEAHLYFGCRSPHEDYLYQE-ELENAQSEGIIT------LHTA 308
Query: 258 FSR--KQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGE 315
FSR QP K YVQH M + +++ LL A Y+ G ++M V +T + + +
Sbjct: 309 FSRMPNQP-KTYVQHVMEQDGKKLIELLDQGAHFYICGDGSQMAPAVEATLMKSYADVHQ 367
Query: 316 ASRDSAANWLKALQRAGRYHVEAWS 340
S A WL+ L+ GRY + W+
Sbjct: 368 VSEADARLWLQQLEEKGRYAKDVWA 392
>pdb|4DQK|A Chain A, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3
pdb|4DQK|B Chain B, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3
Length = 391
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 146/265 (55%), Gaps = 24/265 (9%)
Query: 87 ERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVS---WT 143
+R T+LE+LE +P+ +M + L+P ++ R +SISSSP Q +TVSVVS W+
Sbjct: 139 KRLTMLELLEKYPACEMKFSEFIALLPSIRPRYYSISSSPRVDEKQASITVSVVSGEAWS 198
Query: 144 TPYKRKRTGLCSVWLAGLDPQQGIYIPAWF----QKGSLPRPPPSVPLILIGPGTGCAPF 199
+ K G+ S +LA L Q+G I + + +LP+ P + PLI++GPGTG APF
Sbjct: 199 GYGEYK--GIASNYLAEL--QEGDTITCFISTPQSEFTLPKDPET-PLIMVGPGTGVAPF 253
Query: 200 RGFVEERAIQSSSGPA-APIIFFFGCRN-EDDFLYRELWLSHSLNDGVFSEAKGGGFYVA 257
RGFV+ R G + +FGCR+ +D+LY+E L ++ ++G+ + + A
Sbjct: 254 RGFVQARKQLKEQGQSLGEAHLYFGCRSPHEDYLYQE-ELENAQSEGIIT------LHTA 306
Query: 258 FSR--KQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGE 315
FSR QP K YVQH M + +++ LL A Y+ G ++M V +T + + +
Sbjct: 307 FSRMPNQP-KTYVQHVMEQDGKKLIELLDQGAHFYICGDGSQMAPAVEATLMKSYADVHQ 365
Query: 316 ASRDSAANWLKALQRAGRYHVEAWS 340
S A WL+ L+ GRY + W+
Sbjct: 366 VSEADARLWLQQLEEKGRYAKDVWA 390
>pdb|1DDG|A Chain A, Crystal Structure Of Sir-Fp60
pdb|1DDG|B Chain B, Crystal Structure Of Sir-Fp60
pdb|1DDI|A Chain A, Crystal Structure Of Sir-Fp60
Length = 374
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 127/244 (52%), Gaps = 12/244 (4%)
Query: 98 FPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVW 157
F Q+ + L+ L+ PL R +SI+SS N+VH+TV VV + R R G S +
Sbjct: 141 FSPAQLDAEALINLLRPLTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSF 199
Query: 158 LAGLDPQQGIYIPAWFQKGSLPRPP--PSVPLILIGPGTGCAPFRGFVEERAIQSSSGPA 215
LA ++G + + + R P P P+I+IGPGTG APFR F+++RA + P
Sbjct: 200 LADRVEEEG-EVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRA--ADEAPG 256
Query: 216 APIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQ 275
+FF +DFLY+ W + + +GV + +A+SR Q +KVYVQ K+ EQ
Sbjct: 257 KNWLFFGNPHFTEDFLYQVEWQRY-VKEGVLTRID-----LAWSRDQKEKVYVQDKLREQ 310
Query: 276 SQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335
+W + A IYV G A +M DV E++++ G ++A +L L+ RY
Sbjct: 311 GAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQ 370
Query: 336 VEAW 339
+ +
Sbjct: 371 RDVY 374
>pdb|2BPO|A Chain A, Crystal Structure Of The Yeast Cpr Triple Mutant: D74g,
Y75f, K78a.
pdb|2BPO|B Chain B, Crystal Structure Of The Yeast Cpr Triple Mutant: D74g,
Y75f, K78a
Length = 682
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 124/265 (46%), Gaps = 33/265 (12%)
Query: 85 QKERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTT 144
+K+ V ++E+FP+ ++P PP+ ++++ L + V++
Sbjct: 441 EKQTVHVTSIVENFPNPELPD------APPV----VGVTTNLLRNIQLAQNNVNIAETNL 490
Query: 145 PYKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGSLPRPP-PSVPLILIGPGTGCAPFRGFV 203
P G ++ +P ++ + P PS P+I+IGPGTG APFRGF+
Sbjct: 491 PVHYDLNGPRKLF-------ANYKLPVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFI 543
Query: 204 EERAI----QSSSGPAAPI---IFFFGCRNEDDFLYRELWLSHSLN-DGVFSEAKGGGFY 255
ER Q G + I F+G RN DDFLY++ W ++ DG F
Sbjct: 544 RERVAFLESQKKGGNNVSLGKHILFYGSRNTDDFLYQDEWPEYAKKLDGSFE------MV 597
Query: 256 VAFSR-KQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEG 314
VA SR +KVYVQ K+ + +++ ++ + A IYV G A M V + I+S+
Sbjct: 598 VAHSRLPNTKKVYVQDKLKDYEDQVFEMINNGAFIYVCGDAKGMAKGVSTALVGILSRGK 657
Query: 315 EASRDSAANWLKALQRAGRYHVEAW 339
+ D A +K L+ +GRY + W
Sbjct: 658 SITTDEATELIKMLKTSGRYQEDVW 682
>pdb|2BF4|A Chain A, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductases.
pdb|2BF4|B Chain B, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductases.
pdb|2BN4|A Chain A, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductase
pdb|2BN4|B Chain B, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductase
Length = 682
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 124/265 (46%), Gaps = 33/265 (12%)
Query: 85 QKERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTT 144
+K+ V ++E+FP+ ++P PP+ ++++ L + V++
Sbjct: 441 EKQTVHVTSIVENFPNPELPD------APPV----VGVTTNLLRNIQLAQNNVNIAETNL 490
Query: 145 PYKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGSLPRPP-PSVPLILIGPGTGCAPFRGFV 203
P G ++ +P ++ + P PS P+I+IGPGTG APFRGF+
Sbjct: 491 PVHYDLNGPRKLF-------ANYKLPVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFI 543
Query: 204 EERAI----QSSSGPAAPI---IFFFGCRNEDDFLYRELWLSHSLN-DGVFSEAKGGGFY 255
ER Q G + I F+G RN DDFLY++ W ++ DG F
Sbjct: 544 RERVAFLESQKKGGNNVSLGKHILFYGSRNTDDFLYQDEWPEYAKKLDGSFE------MV 597
Query: 256 VAFSR-KQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEG 314
VA SR +KVYVQ K+ + +++ ++ + A IYV G A M V + I+S+
Sbjct: 598 VAHSRLPNTKKVYVQDKLKDYEDQVFEMINNGAFIYVCGDAKGMAKGVSTALVGILSRGK 657
Query: 315 EASRDSAANWLKALQRAGRYHVEAW 339
+ D A +K L+ +GRY + W
Sbjct: 658 SITTDEATELIKMLKTSGRYQEDVW 682
>pdb|3VO1|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Ii
pdb|3VO1|B Chain B, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Ii
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 104/244 (42%), Gaps = 36/244 (14%)
Query: 114 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 170
P K R +SI+SS L V L V + +T G+CS +L L P + I
Sbjct: 89 PHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDQGEVVKGVCSNFLCDLKPGAEVKIT 148
Query: 171 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 225
K L P+ +I++ GTG APFR F+ EE +G A F G
Sbjct: 149 GPVGKEMLMPKDPNATIIMLATGTGIAPFRSFLWKMFFEEHEDYKYTGLA---WLFLGVP 205
Query: 226 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAF--SRKQP----QKVYVQHKMLEQSQRI 279
D LY+E E F + F SR+Q +K+Y+Q +M E + +
Sbjct: 206 TSDTLLYKEELEK-------MKEMAPDNFRLDFAVSREQTNAAGEKMYIQTRMAEYKEEL 258
Query: 280 WNLLLSKASIYVAGSATK-MPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYH 335
W LL K + YV K M + ++ +K+G NWL K L+++ +++
Sbjct: 259 WE-LLKKDNTYVYMCGLKGMEKGIDDIMLDLAAKDG-------INWLDYKKQLKKSEQWN 310
Query: 336 VEAW 339
VE +
Sbjct: 311 VEVY 314
>pdb|3VO2|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Iii
pdb|3VO2|B Chain B, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Iii
Length = 310
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 102/244 (41%), Gaps = 36/244 (14%)
Query: 114 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 170
P K R +SI+SS L V L V + +T G+CS +L L P + I
Sbjct: 85 PHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDQGEIVKGVCSNFLCDLKPGADVKIT 144
Query: 171 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRG-----FVEERAIQSSSGPAAPIIFFFGCR 225
K L P+ +I++ GTG APFR F+EE SG A F G
Sbjct: 145 GPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFLEEHEDYKFSGLA---WLFLGVP 201
Query: 226 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAF--SRKQP----QKVYVQHKMLEQSQRI 279
D LY+E E F + F SR+Q +K+Y+Q +M E + +
Sbjct: 202 TSDSLLYKEELEK-------MKEMAPDNFRLDFAVSREQTNAAGEKMYIQTRMAEYREEL 254
Query: 280 WNLLLSKASIYVAGSATK-MPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYH 335
W LL K + YV K M + + +K+G +W+ K L++ +++
Sbjct: 255 WE-LLKKDNTYVYMCGLKGMEKGIDDIMLNLAAKDG-------IDWMQYKKQLKKGEQWN 306
Query: 336 VEAW 339
VE +
Sbjct: 307 VEVY 310
>pdb|1JB9|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From
Maize Root At 1.7 Angstroms
Length = 316
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 85/197 (43%), Gaps = 17/197 (8%)
Query: 150 RTGLCSVWLAGLDPQQGIYIPAWFQKGSL-PRPPPSVPLILIGPGTGCAPFRGFVEERAI 208
+ G+CS +L P I + K L P P+ I+I GTG APFRG++ +
Sbjct: 130 KNGVCSNFLCNSKPGDKIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFM 189
Query: 209 QSSSGP--AAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQ-- 264
+ F G N D LY E + S+ + + A SR+Q
Sbjct: 190 EDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSY-----LKQYPDNFRYDKALSREQKNRS 244
Query: 265 --KVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAA 322
K+YVQ K+ E S I+ LL A IY G MP + T +++ + GE S
Sbjct: 245 GGKMYVQDKIEEYSDEIFKLLDGGAHIYFCGLKGMMPG-IQDTLKKVAERRGE----SWD 299
Query: 323 NWLKALQRAGRYHVEAW 339
L L++ ++HVE +
Sbjct: 300 QKLAQLKKNKQWHVEVY 316
>pdb|3LVB|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From
Maize Root At 1.7 Angstroms - Test Set Withheld
Length = 311
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 85/197 (43%), Gaps = 17/197 (8%)
Query: 150 RTGLCSVWLAGLDPQQGIYIPAWFQKGSL-PRPPPSVPLILIGPGTGCAPFRGFVEERAI 208
+ G+CS +L P I + K L P P+ I+I GTG APFRG++ +
Sbjct: 125 KNGVCSNFLCNSKPGDKIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFM 184
Query: 209 QSSSGP--AAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQ-- 264
+ F G N D LY E + S+ + + A SR+Q
Sbjct: 185 EDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSY-----LKQYPDNFRYDKALSREQKNRS 239
Query: 265 --KVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAA 322
K+YVQ K+ E S I+ LL A IY G MP + T +++ + GE S
Sbjct: 240 GGKMYVQDKIEEYSDEIFKLLDGGAHIYFCGLKGMMPG-IQDTLKKVAERRGE----SWD 294
Query: 323 NWLKALQRAGRYHVEAW 339
L L++ ++HVE +
Sbjct: 295 QKLAQLKKNKQWHVEVY 311
>pdb|3LO8|A Chain A, Crystal Structure Of The Oxidized Form Of Ferredoxin:nadp+
Reductase From Maize Root At 1.05 Angstroms
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 17/195 (8%)
Query: 150 RTGLCSVWLAGLDPQQGIYIPAWFQKGSL-PRPPPSVPLILIGPGTGCAPFRGFVEERAI 208
+ G+CS +L P I + K L P P+ I+I GTG APFRG++ +
Sbjct: 125 KNGVCSNFLCNSKPGDKIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFM 184
Query: 209 QSSSGP--AAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQ-- 264
+ F G N D LY E + S+ + + A SR+Q
Sbjct: 185 EDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSY-----LKQYPDNFRYDKALSREQKNRS 239
Query: 265 --KVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAA 322
K+YVQ K+ E S I+ LL A IY G MP + T +++ + GE S
Sbjct: 240 GGKMYVQDKIEEYSDEIFKLLDGGAHIYFCGLKGMMPG-IQDTLKKVAERRGE----SWD 294
Query: 323 NWLKALQRAGRYHVE 337
L L++ ++HVE
Sbjct: 295 QKLAQLKKNKQWHVE 309
>pdb|1GAQ|A Chain A, Crystal Structure Of The Complex Between Ferredoxin And
Ferredoxin-Nadp+ Reductase
pdb|1GAQ|C Chain C, Crystal Structure Of The Complex Between Ferredoxin And
Ferredoxin-Nadp+ Reductase
pdb|1GAW|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Maize Leaf
pdb|1GAW|B Chain B, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Maize Leaf
Length = 314
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 105/255 (41%), Gaps = 30/255 (11%)
Query: 100 SVQMPIDWLVQLVPPLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSV 156
S+ + D + + P K R +SI+SS + V L V + +T G+CS
Sbjct: 75 SIGVIADGVDKNGKPHKVRLYSIASSAIGDFGDSKTVSLCVKRLIYTNDAGEIVKGVCSN 134
Query: 157 WLAGLDPQQGIYIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAA 216
+L L P + I K L P+ +I++ GTG APFR F+ + +
Sbjct: 135 FLCDLQPGDNVQITGPVGKEMLMPKDPNATIIMLATGTGIAPFRSFLWKMFFEKHDDYKF 194
Query: 217 PII--FFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYV--AFSRKQP----QKVYV 268
+ F G LY+E + G E F V A SR+Q +++Y+
Sbjct: 195 NGLGWLFLGVPTSSSLLYKEEF-------GKMKERAPENFRVDYAVSREQTNAAGERMYI 247
Query: 269 QHKMLEQSQRIWNLLLSKASIYVAGSATK-MPSDVWSTFEEIVSKEGEASRDSAANWL-- 325
Q +M E + +W LL K + YV K M + + K+G +W
Sbjct: 248 QTRMAEYKEELWE-LLKKDNTYVYMCGLKGMEKGIDDIMVSLAEKDG-------IDWFDY 299
Query: 326 -KALQRAGRYHVEAW 339
K L+R +++VE +
Sbjct: 300 KKQLKRGDQWNVEVY 314
>pdb|1SM4|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Paprika
pdb|1SM4|B Chain B, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Paprika
Length = 296
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 24/238 (10%)
Query: 114 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 170
P K R +SI+SS L V L V + +T + G+CS +L L P + I
Sbjct: 71 PHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDKGEEVKGVCSNFLCDLKPGADVKIT 130
Query: 171 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 225
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 131 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLA---WLFLGVP 187
Query: 226 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWN 281
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 188 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQTNEKGEKMYIQTRMAQYAEELWT 242
Query: 282 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAW 339
LL + M + + +KEG A++ K L++A +++VE +
Sbjct: 243 LLKKDNTFVYMCGLKGMEQGIDDIMSSLAAKEGI----DWADYKKQLKKAEQWNVEVY 296
>pdb|1W35|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: Y 303 W)
pdb|1W87|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 W) Complexed
With Nadp By Cocrystallization
pdb|1W87|B Chain B, Ferredoxin-Nadp Reductase (Mutation: Y 303 W) Complexed
With Nadp By Cocrystallization
Length = 304
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 114 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 167
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 168 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 221
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 222 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 276
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 277 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 336 VEAW 339
VE W
Sbjct: 301 VETW 304
>pdb|1QGA|A Chain A, Pea Fnr Y308w Mutant In Complex With Nadp+
pdb|1QGA|B Chain B, Pea Fnr Y308w Mutant In Complex With Nadp+
Length = 308
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 99/241 (41%), Gaps = 30/241 (12%)
Query: 114 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 170
P K R +SI+SS + V L V + +T G+CS +L L P + I
Sbjct: 83 PHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKIT 142
Query: 171 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 225
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 143 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAW---LFLGVP 199
Query: 226 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWN 281
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 200 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWE 254
Query: 282 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 338
LL + M + + +K+G +W+ + L++A +++VE
Sbjct: 255 LLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEV 307
Query: 339 W 339
W
Sbjct: 308 W 308
>pdb|1QH0|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 76 Mutated By
Asp And Leu 78 Mutated By Asp
Length = 295
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 114 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 167
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 65 PEKDRDYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 168 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 221
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 123 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 181
Query: 222 -FGCRNEDDFLYRELW--LSHSLNDGVFSEAKGGGFYVAFSRKQPQ--KVYVQHKMLEQS 276
FG + LY+E + D + ++ +K PQ ++Y+Q ++ E +
Sbjct: 182 VFGVPTTPNILYKEELEEIQQKYPDNFRLT-----YAISREQKNPQGGRMYIQDRVAEHA 236
Query: 277 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 237 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 291
Query: 336 VEAW 339
VE +
Sbjct: 292 VETY 295
>pdb|1H85|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Val 136 Replaced By
Leu (V136l)
Length = 295
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 114 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 167
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 65 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 168 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 221
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 123 KITGPLGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 181
Query: 222 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 276
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 182 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 236
Query: 277 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 237 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 291
Query: 336 VEAW 339
VE +
Sbjct: 292 VETY 295
>pdb|1QUF|A Chain A, X-Ray Structure Of A Complex Nadp+-Ferredoxin:nadp+
Reductase From The Cyanobacterium Anabaena Pcc 7119 At
2.25 Angstroms
Length = 304
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 114 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 167
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 168 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 221
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 222 -FGCRNEDDFLYRELW--LSHSLNDGVFSEAKGGGFYVAFSRKQPQ--KVYVQHKMLEQS 276
FG + LY+E + D + ++ +K PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKEELEEIQQKYPDNFRLT-----YAISREQKNPQGGRMYIQDRVAEHA 245
Query: 277 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNEKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 336 VEAW 339
VE +
Sbjct: 301 VETY 304
>pdb|1GO2|A Chain A, Structure Of Ferredoxin-nadp+ Reductase With Lys 72
Replaced By Glu (k72e)
Length = 304
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 114 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 167
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 168 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 221
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 222 -FGCRNEDDFLYRELW--LSHSLNDGVFSEAKGGGFYVAFSRKQPQ--KVYVQHKMLEQS 276
FG + LY+E + D + ++ +K PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKEELEEIQQKYPDNFRLT-----YAISREQKNPQGGRMYIQDRVAEHA 245
Query: 277 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 336 VEAW 339
VE +
Sbjct: 301 VETY 304
>pdb|1GR1|A Chain A, Structure Of Ferredoxin-Nadp+ Reductase With Glu 139
Replaced By Lys (E139k)
Length = 303
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 114 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 167
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 168 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 221
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 131 KITGPVGKKMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 222 -FGCRNEDDFLYRELW--LSHSLNDGVFSEAKGGGFYVAFSRKQPQ--KVYVQHKMLEQS 276
FG + LY+E + D + ++ +K PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKEELEEIQQKYPDNFRLT-----YAISREQKNPQGGRMYIQDRVAEHA 244
Query: 277 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 336 VEAW 339
VE +
Sbjct: 300 VETY 303
>pdb|1GJR|A Chain A, Ferredoxin-Nadp+ Reductase Complexed With Nadp+ By
Cocrystallization
Length = 304
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 114 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 167
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 168 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 221
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 222 -FGCRNEDDFLYRELW--LSHSLNDGVFSEAKGGGFYVAFSRKQPQ--KVYVQHKMLEQS 276
FG + LY+E + D + ++ +K PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKEELEEIQQKYPDNFRLT-----YAISREQKNPQGGRMYIQDRVAEHA 245
Query: 277 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 336 VEAW 339
VE +
Sbjct: 301 VETY 304
>pdb|1BJK|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Arg 264 Replaced By
Glu (r264e)
Length = 295
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 114 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 167
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 65 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 168 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 221
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 123 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 181
Query: 222 -FGCRNEDDFLYRELW--LSHSLNDGVFSEAKGGGFYVAFSRKQPQ--KVYVQHKMLEQS 276
FG + LY+E + D + ++ +K PQ ++Y+Q ++ E +
Sbjct: 182 VFGVPTTPNILYKEELEEIQQKYPDNFRLT-----YAISREQKNPQGGRMYIQDRVAEHA 236
Query: 277 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 237 DQLWQLIKNQKTHTYICG-LEGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 291
Query: 336 VEAW 339
VE +
Sbjct: 292 VETY 295
>pdb|1QUE|A Chain A, X-Ray Structure Of The Ferredoxin:nadp+ Reductase From The
Cyanobacterium Anabaena Pcc 7119 At 1.8 Angstroms
Length = 303
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 114 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 167
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 168 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 221
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 131 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 222 -FGCRNEDDFLYRELW--LSHSLNDGVFSEAKGGGFYVAFSRKQPQ--KVYVQHKMLEQS 276
FG + LY+E + D + ++ +K PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKEELEEIQQKYPDNFRLT-----YAISREQKNPQGGRMYIQDRVAEHA 244
Query: 277 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 336 VEAW 339
VE +
Sbjct: 300 VETY 303
>pdb|1OGJ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 263 Replaced By
Pro (L263p)
Length = 303
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 114 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 167
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 168 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 221
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 131 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 222 -FGCRNEDDFLYRELW--LSHSLNDGVFSEAKGGGFYVAFSRKQPQ--KVYVQHKMLEQS 276
FG + LY+E + D + ++ +K PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKEELEEIQQKYPDNFRLT-----YAISREQKNPQGGRMYIQDRVAEHA 244
Query: 277 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DQLWQLIKNQKTHTYICGPRG-MEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 336 VEAW 339
VE +
Sbjct: 300 VETY 303
>pdb|1QGZ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 78 Replaced By
Asp (L78d)
Length = 295
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 114 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 167
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 65 PEKLRDYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 168 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 221
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 123 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 181
Query: 222 -FGCRNEDDFLYRELW--LSHSLNDGVFSEAKGGGFYVAFSRKQPQ--KVYVQHKMLEQS 276
FG + LY+E + D + ++ +K PQ ++Y+Q ++ E +
Sbjct: 182 VFGVPTTPNILYKEELEEIQQKYPDNFRLT-----YAISREQKNPQGGRMYIQDRVAEHA 236
Query: 277 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 237 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 291
Query: 336 VEAW 339
VE +
Sbjct: 292 VETY 295
>pdb|1EWY|A Chain A, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase
Complex
pdb|1EWY|B Chain B, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase
Complex
Length = 303
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 114 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 167
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 168 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 221
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 131 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 222 -FGCRNEDDFLYRELW--LSHSLNDGVFSEAKGGGFYVAFSRKQPQ--KVYVQHKMLEQS 276
FG + LY+E + D + ++ +K PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKEELEEIQQKYPDNFRLT-----YAISREQKNPQGGRMYIQDRVAEHA 244
Query: 277 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335
+W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DELWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 336 VEAW 339
VE +
Sbjct: 300 VETY 303
>pdb|1BQE|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly (T155g)
Length = 295
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 114 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 167
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 65 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 168 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 221
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 123 KITGPVGKEMLLPDDPEANVIMLAGGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 181
Query: 222 -FGCRNEDDFLYRELW--LSHSLNDGVFSEAKGGGFYVAFSRKQPQ--KVYVQHKMLEQS 276
FG + LY+E + D + ++ +K PQ ++Y+Q ++ E +
Sbjct: 182 VFGVPTTPNILYKEELEEIQQKYPDNFRLT-----YAISREQKNPQGGRMYIQDRVAEHA 236
Query: 277 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 237 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 291
Query: 336 VEAW 339
VE +
Sbjct: 292 VETY 295
>pdb|1W34|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S)
Length = 304
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 106/243 (43%), Gaps = 31/243 (12%)
Query: 114 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 167
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 168 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 221
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 222 -FGCRNEDDFLYRELW--LSHSLNDGVFSEAKGGGFYVAFSRKQPQ--KVYVQHKMLEQS 276
FG + LY+E + D + ++ +K PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKEELEEIQQKYPDNFRLT-----YAISREQKNPQGGRMYIQDRVAEHA 245
Query: 277 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 336 VEA 338
VE
Sbjct: 301 VET 303
>pdb|1E62|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Arg (K75r)
Length = 304
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 114 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 167
P + R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PERLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 168 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 221
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 222 -FGCRNEDDFLYRELW--LSHSLNDGVFSEAKGGGFYVAFSRKQPQ--KVYVQHKMLEQS 276
FG + LY+E + D + ++ +K PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKEELEEIQQKYPDNFRLT-----YAISREQKNPQGGRMYIQDRVAEHA 245
Query: 277 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 336 VEAW 339
VE +
Sbjct: 301 VETY 304
>pdb|2X3U|A Chain A, Ferredoxin-Nadp Reductase Mutant With Tyr 303 Replaced By
Phe (Y303f)
Length = 303
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 114 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 167
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 168 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 221
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 131 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 222 -FGCRNEDDFLYRELW--LSHSLNDGVFSEAKGGGFYVAFSRKQPQ--KVYVQHKMLEQS 276
FG + LY+E + D + ++ +K PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKEELEEIQQKYPDNFRLT-----YAISREQKNPQGGRMYIQDRVAEHA 244
Query: 277 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335
+W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DELWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 336 VEAW 339
VE +
Sbjct: 300 VETF 303
>pdb|2BSA|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S) Complexed
With Nadp
Length = 303
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 106/243 (43%), Gaps = 31/243 (12%)
Query: 114 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 167
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGATVYGVCSTYLTHIEPGSEV 130
Query: 168 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 221
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 131 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 222 -FGCRNEDDFLYRELW--LSHSLNDGVFSEAKGGGFYVAFSRKQPQ--KVYVQHKMLEQS 276
FG + LY+E + D + ++ +K PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKEELEEIQQKYPDNFRLT-----YAISREQKNPQGGRMYIQDRVAEHA 244
Query: 277 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 336 VEA 338
VE
Sbjct: 300 VET 302
>pdb|1E64|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Gln (K75q)
Length = 304
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 114 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 167
P + R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEQLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 168 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 221
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 222 -FGCRNEDDFLYRELW--LSHSLNDGVFSEAKGGGFYVAFSRKQPQ--KVYVQHKMLEQS 276
FG + LY+E + D + ++ +K PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKEELEEIQQKYPDNFRLT-----YAISREQKNPQGGRMYIQDRVAEHA 245
Query: 277 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 336 VEAW 339
VE +
Sbjct: 301 VETY 304
>pdb|1QGY|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Glu (K75e)
Length = 295
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 114 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 167
P + R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 65 PEELRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 168 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 221
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 123 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 181
Query: 222 -FGCRNEDDFLYRELW--LSHSLNDGVFSEAKGGGFYVAFSRKQPQ--KVYVQHKMLEQS 276
FG + LY+E + D + ++ +K PQ ++Y+Q ++ E +
Sbjct: 182 VFGVPTTPNILYKEELEEIQQKYPDNFRLT-----YAISREQKNPQGGRMYIQDRVAEHA 236
Query: 277 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 237 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 291
Query: 336 VEAW 339
VE +
Sbjct: 292 VETY 295
>pdb|4AF6|A Chain A, Pea Fnr L268v Mutant
pdb|4AF6|B Chain B, Pea Fnr L268v Mutant
Length = 308
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 30/241 (12%)
Query: 114 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 170
P K R +SI+SS + V L V + +T G+CS +L L P + I
Sbjct: 83 PHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKIT 142
Query: 171 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 225
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 143 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAW---LFLGVP 199
Query: 226 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWN 281
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 200 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWE 254
Query: 282 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 338
LL + M + + +K+G +W+ + L++A +++VE
Sbjct: 255 LLKKDNTFVYMCGVKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEV 307
Query: 339 W 339
+
Sbjct: 308 Y 308
>pdb|1E63|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Ser (K75s)
Length = 304
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 114 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 167
P R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PESLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 168 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 221
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 222 -FGCRNEDDFLYRELW--LSHSLNDGVFSEAKGGGFYVAFSRKQPQ--KVYVQHKMLEQS 276
FG + LY+E + D + ++ +K PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKEELEEIQQKYPDNFRLT-----YAISREQKNPQGGRMYIQDRVAEHA 245
Query: 277 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 336 VEAW 339
VE +
Sbjct: 301 VETY 304
>pdb|1OGI|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly And Ala 160 Replaced By Thr (T155g-A160t)
Length = 303
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 114 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 167
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 168 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 221
I K L P +I++ GTG P R ++ R + + A P F
Sbjct: 131 KITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 222 -FGCRNEDDFLYRELW--LSHSLNDGVFSEAKGGGFYVAFSRKQPQ--KVYVQHKMLEQS 276
FG + LY+E + D + ++ +K PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKEELEEIQQKYPDNFRLT-----YAISREQKNPQGGRMYIQDRVAEHA 244
Query: 277 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 336 VEAW 339
VE +
Sbjct: 300 VETY 303
>pdb|1H42|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr And Leu 263 Replaced By Pro
(T155g-A160t-L263p)
Length = 304
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 114 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 167
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 168 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 221
I K L P +I++ GTG P R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 222 -FGCRNEDDFLYRELW--LSHSLNDGVFSEAKGGGFYVAFSRKQPQ--KVYVQHKMLEQS 276
FG + LY+E + D + ++ +K PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKEELEEIQQKYPDNFRLT-----YAISREQKNPQGGRMYIQDRVAEHA 245
Query: 277 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICGPRG-MEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 336 VEAW 339
VE +
Sbjct: 301 VETY 304
>pdb|1QG0|A Chain A, Wild-type Pea Fnr
pdb|1QG0|B Chain B, Wild-type Pea Fnr
Length = 308
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 30/241 (12%)
Query: 114 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 170
P K R +SI+SS + V L V + +T G+CS +L L P + I
Sbjct: 83 PHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKIT 142
Query: 171 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 225
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 143 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAW---LFLGVP 199
Query: 226 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWN 281
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 200 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWE 254
Query: 282 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 338
LL + M + + +K+G +W+ + L++A +++VE
Sbjct: 255 LLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEV 307
Query: 339 W 339
+
Sbjct: 308 Y 308
>pdb|2BMW|A Chain A, Ferredoxin: Nadp+reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro,
Arg 264 Replaced By Pro And Gly 265 Replaced By Pro
(T155g- A160t-L263p-R264p-G265p)
Length = 304
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 114 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 167
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 168 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 221
I K L P +I++ GTG P R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 222 -FGCRNEDDFLYRELW--LSHSLNDGVFSEAKGGGFYVAFSRKQPQ--KVYVQHKMLEQS 276
FG + LY+E + D + ++ +K PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKEELEEIQQKYPDNFRLT-----YAISREQKNPQGGRMYIQDRVAEHA 245
Query: 277 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICGPPP-MEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 336 VEAW 339
VE +
Sbjct: 301 VETY 304
>pdb|3MHP|A Chain A, Fnr-Recruitment To The Thylakoid
pdb|3MHP|B Chain B, Fnr-Recruitment To The Thylakoid
Length = 296
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 30/241 (12%)
Query: 114 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 170
P K R +SI+SS + V L V + +T G+CS +L L P + I
Sbjct: 70 PHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKIT 129
Query: 171 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 225
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 130 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAW---LFLGVP 186
Query: 226 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWN 281
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 187 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWE 241
Query: 282 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 338
LL + M + + +K+G +W+ + L++A +++VE
Sbjct: 242 LLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEV 294
Query: 339 W 339
+
Sbjct: 295 Y 295
>pdb|1B2R|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: E 301 A)
Length = 304
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 114 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 167
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 168 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 221
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 222 -FGCRNEDDFLYRELW--LSHSLNDGVFSEAKGGGFYVAFSRKQPQ--KVYVQHKMLEQS 276
FG + LY+E + D + ++ +K PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKEELEEIQQKYPDNFRLT-----YAISREQKNPQGGRMYIQDRVAEHA 245
Query: 277 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 336 VEAW 339
V +
Sbjct: 301 VATY 304
>pdb|4AF7|A Chain A, Pea Fnr C266m Mutant
pdb|4AF7|B Chain B, Pea Fnr C266m Mutant
Length = 308
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 30/241 (12%)
Query: 114 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 170
P K R +SI+SS + V L V + +T G+CS +L L P + I
Sbjct: 83 PHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKIT 142
Query: 171 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 225
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 143 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAW---LFLGVP 199
Query: 226 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWN 281
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 200 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWE 254
Query: 282 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 338
LL + M + + +K+G +W+ + L++A +++VE
Sbjct: 255 LLKKDNTFVYMMGLKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEV 307
Query: 339 W 339
+
Sbjct: 308 Y 308
>pdb|1QFY|A Chain A, Pea Fnr Y308s Mutant In Complex With Nadp+
pdb|1QFY|B Chain B, Pea Fnr Y308s Mutant In Complex With Nadp+
pdb|1QFZ|A Chain A, Pea Fnr Y308s Mutant In Complex With Nadph
pdb|1QFZ|B Chain B, Pea Fnr Y308s Mutant In Complex With Nadph
Length = 308
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 98/240 (40%), Gaps = 30/240 (12%)
Query: 114 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 170
P K R +SI+SS + V L V + +T G+CS +L L P + I
Sbjct: 83 PHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKIT 142
Query: 171 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 225
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 143 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAW---LFLGVP 199
Query: 226 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWN 281
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 200 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWE 254
Query: 282 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 338
LL + M + + +K+G +W+ + L++A +++VE
Sbjct: 255 LLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEV 307
>pdb|2VYQ|A Chain A, Ferredoxin:nadp Reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro
And Tyr 303 Replaced By Ser (T155g-A160t-L263p-Y303s)
pdb|2VZL|A Chain A, Ferredoxin-Nadp Reductase (Mutations: T155g, A160t, L263p
And Y303s) Complexed With Nad By Cocrystallization
Length = 304
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 31/243 (12%)
Query: 114 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 167
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 168 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 221
I K L P +I++ GTG P R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 222 -FGCRNEDDFLYRELW--LSHSLNDGVFSEAKGGGFYVAFSRKQPQ--KVYVQHKMLEQS 276
FG + LY+E + D + ++ +K PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKEELEEIQQKYPDNFRLT-----YAISREQKNPQGGRMYIQDRVAEHA 245
Query: 277 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335
+W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DELWQLIKNQKTHTYICGPRG-MEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 336 VEA 338
VE
Sbjct: 301 VET 303
>pdb|2XNC|A Chain A, Crystal Structure Of An Engineered Ferredoxin Nadp
Reductase (Fnr) From Pisum Sativum
pdb|2XNC|B Chain B, Crystal Structure Of An Engineered Ferredoxin Nadp
Reductase (Fnr) From Pisum Sativum
Length = 315
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 33/238 (13%)
Query: 114 PLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWF 173
P K R +SI+SS + TVS+ KR G+CS +L L P + I
Sbjct: 98 PHKLRLYSIASSAIGDFGDSK-TVSLC-----VKRVPDGVCSNFLCDLKPGSEVKITGPV 151
Query: 174 QKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCRNED 228
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 152 GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLA---WLFLGVPTSS 208
Query: 229 DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWNLLL 284
LY+E + + A SR+Q +K+Y+Q +M + ++ +W LL
Sbjct: 209 SLLYKEEFEKMKE-----KAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLK 263
Query: 285 SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEAW 339
+ M + + +K+G +W+ + L++A +++VE +
Sbjct: 264 KDNTFVYMCGLKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEVY 314
>pdb|1FNB|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
pdb|1FNC|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
pdb|1FND|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
Length = 314
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 100/242 (41%), Gaps = 32/242 (13%)
Query: 114 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 170
P K R +SI+SS L V L V + +T G+CS +L L P + +
Sbjct: 89 PHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGAEVKLT 148
Query: 171 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 225
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 149 GPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLA---WLFLGVP 205
Query: 226 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWN 281
LY+E + A SR+Q +K+Y+Q +M + + +W
Sbjct: 206 TSSSLLYKEEFEKMKE-----KAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWE 260
Query: 282 LLLSKASIYVAGSATK-MPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVE 337
+L K + YV K M + + + EG +W+ + L++A +++VE
Sbjct: 261 -MLKKDNTYVYMCGLKGMEKGIDDIMVSLAAAEG-------IDWIEYKRQLKKAEQWNVE 312
Query: 338 AW 339
+
Sbjct: 313 VY 314
>pdb|1BX1|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312q
Length = 314
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 97/241 (40%), Gaps = 30/241 (12%)
Query: 114 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 170
P K R +SI+SS L V L V + +T G+CS +L L P + +
Sbjct: 89 PHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGAEVKLT 148
Query: 171 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 225
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 149 GPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLA---WLFLGVP 205
Query: 226 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWN 281
LY+E + A SR+Q +K+Y+Q +M + + +W
Sbjct: 206 TSSSLLYKEEFEKMKE-----KAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWE 260
Query: 282 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 338
+L + + M + + + EG +W+ + L++A +++V+
Sbjct: 261 MLKKDNTYFYMCGLKGMEKGIDDIMVSLAAAEG-------IDWIEYKRQLKKAEQWNVQV 313
Query: 339 W 339
+
Sbjct: 314 Y 314
>pdb|1FRN|A Chain A, The Involvement Of Ser96 In The Catalytic Mechanism Of
Ferredoxin-Nadp+ Reductase: Structure-Function
Relationship As Studied By Site-Directed Mutagenesis And
X- Ray Crystallography
Length = 314
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 96/241 (39%), Gaps = 30/241 (12%)
Query: 114 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 170
P K R + I+SS L V L V + +T G+CS +L L P + +
Sbjct: 89 PHKLRLYVIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGAEVKLT 148
Query: 171 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 225
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 149 GPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLA---WLFLGVP 205
Query: 226 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWN 281
LY+E + A SR+Q +K+Y+Q +M + + +W
Sbjct: 206 TSSSLLYKEEFEKMKE-----KAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWE 260
Query: 282 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 338
+L + + M + + + EG +W+ + L++A +++VE
Sbjct: 261 MLKKDNTYFYMCGLKGMEKGIDDIMVSLAAAEG-------IDWIEYKRQLKKAEQWNVEV 313
Query: 339 W 339
+
Sbjct: 314 Y 314
>pdb|1BX0|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312l
Length = 314
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 83/213 (38%), Gaps = 20/213 (9%)
Query: 114 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 170
P K R +SI+SS L V L V + +T G+CS +L L P + +
Sbjct: 89 PHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGAEVKLT 148
Query: 171 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 225
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 149 GPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLA---WLFLGVP 205
Query: 226 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWN 281
LY+E + A SR+Q +K+Y+Q +M + + +W
Sbjct: 206 TSSSLLYKEEFEKMKE-----KAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWE 260
Query: 282 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEG 314
+L + + M + + + EG
Sbjct: 261 MLKKDNTYFYMCGLKGMEKGIDDIMVSLAAAEG 293
>pdb|1FRQ|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312a
Length = 314
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 83/213 (38%), Gaps = 20/213 (9%)
Query: 114 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 170
P K R +SI+SS L V L V + +T G+CS +L L P + +
Sbjct: 89 PHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGAEVKLT 148
Query: 171 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 225
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 149 GPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLA---WLFLGVP 205
Query: 226 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWN 281
LY+E + A SR+Q +K+Y+Q +M + + +W
Sbjct: 206 TSSSLLYKEEFEKMKE-----KAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWE 260
Query: 282 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEG 314
+L + + M + + + EG
Sbjct: 261 MLKKDNTYFYMCGLKGMEKGIDDIMVSLAAAEG 293
>pdb|2RC5|A Chain A, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|B Chain B, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|C Chain C, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|D Chain D, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC6|A Chain A, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|B Chain B, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|C Chain C, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|D Chain D, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
Length = 314
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 67/169 (39%), Gaps = 12/169 (7%)
Query: 152 GLCSVWLAGLDPQQGIYIPA-WFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQS 210
G+CS ++ L P + + +K LP S ++ + GTG APF G EE
Sbjct: 132 GVCSNYMCDLKPGDEVTMTGPSGKKFLLPNTDFSGDIMFLATGTGIAPFIGMSEELLEHK 191
Query: 211 SSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQ-----K 265
I +G D+ + + G+ S+ K A SR++ +
Sbjct: 192 LIKFTGNITLVYGAPYSDELVMMDYL------KGLESKHKNFKLITAISREEKNSFDGGR 245
Query: 266 VYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEG 314
+Y+ H++ EQ++ + +L Y+ G M V ++I G
Sbjct: 246 MYISHRVREQAEAVKKILNGGGRFYICGGPKGMEKGVIEEIQKISGNTG 294
>pdb|2B5O|A Chain A, Ferredoxin-nadp Reductase
pdb|2B5O|B Chain B, Ferredoxin-nadp Reductase
Length = 402
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 98/245 (40%), Gaps = 36/245 (14%)
Query: 114 PLKTRAFSISSS---PLAHPNQVHLTVSVVSWTTPYKRKRT-GLCSVWLAGLD-PQQGIY 168
P K R +SI+S+ + V L V + + P + G+CS +L L +
Sbjct: 175 PHKLRLYSIASTRHGDMEDNKTVSLCVRQLEYQDPESGETVYGVCSTYLCNLPVGTDDVK 234
Query: 169 IPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFG 223
I K L ++++ GTG APFR F+ E+ G A I FG
Sbjct: 235 ITGPVGKEMLLPDDEDATVVMLATGTGIAPFRAFLWRMFKEQHEDYKFKGKAWLI---FG 291
Query: 224 CRNEDDFLYRELWLSHSL-NDGVFSEAKGGGFYVAFSRKQPQ----KVYVQHKMLEQSQR 278
+ LY++ + + N F A SR+Q KVYVQ ++ E +
Sbjct: 292 VPYTANILYKDDFEKMAAENPDNFR------LTYAISREQKTADGGKVYVQSRVSEYADE 345
Query: 279 IWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANW---LKALQRAGRY 334
++ ++ +Y+ G P + TF K G NW +++++ R+
Sbjct: 346 LFEMIQKPNTHVYMCGLKGMQPP-IDETFTAEAEKRG-------LNWEEMRRSMKKEHRW 397
Query: 335 HVEAW 339
HVE +
Sbjct: 398 HVEVY 402
>pdb|1MQS|A Chain A, Crystal Structure Of Sly1p In Complex With An N-Terminal
Peptide Of Sed5p
Length = 671
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 20 DIHKN--TTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQY 70
DI K+ T + KLR+F+ L + T+ P+ + V +YF +++ L+Y
Sbjct: 442 DILKDGKTNNLEDKLRSFIVLYLTSTTGLPKDFVQNVENYFKENDYDINALKY 494
>pdb|2INY|A Chain A, Nanoporous Crystals Of Chicken Embryo Lethal Orphan
(celo) Adenovirus Major Coat Protein, Hexon
Length = 942
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 38 LTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVL 92
LT D+T+A+PR +F + T E+ E LQ F S G + K R+TV+
Sbjct: 4 LTPDLTTATPRLQYFHIAGP-GTREYLSEDLQQFISATGS--YFDLKNKFRQTVV 55
>pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX
pdb|1XZW|B Chain B, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX
Length = 426
Score = 27.7 bits (60), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 8/51 (15%)
Query: 114 PLKTRAFSISSSPLAHPNQVHLTVS-------VVSWTTPYKRKRTGLCSVW 157
P + F++ S A P QVH+T ++SWTTPY + W
Sbjct: 10 PWDSDVFAVPSGYNA-PQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYW 59
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,598,089
Number of Sequences: 62578
Number of extensions: 448403
Number of successful extensions: 1230
Number of sequences better than 100.0: 83
Number of HSP's better than 100.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1024
Number of HSP's gapped (non-prelim): 85
length of query: 340
length of database: 14,973,337
effective HSP length: 99
effective length of query: 241
effective length of database: 8,778,115
effective search space: 2115525715
effective search space used: 2115525715
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)