Query 019521
Match_columns 340
No_of_seqs 227 out of 2436
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 03:06:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019521.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019521hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qfs_A CPR, P450R, NADPH--cyto 100.0 2.6E-70 8.8E-75 539.2 32.1 309 23-340 139-458 (458)
2 2qtl_A MSR;, methionine syntha 100.0 8.5E-68 2.9E-72 531.5 32.9 308 24-340 199-539 (539)
3 3qe2_A CPR, P450R, NADPH--cyto 100.0 1.1E-67 3.6E-72 539.8 32.9 310 23-340 299-618 (618)
4 4dql_A Bifunctional P-450/NADP 100.0 6.7E-67 2.3E-71 507.5 30.7 304 23-340 82-392 (393)
5 1f20_A Nitric-oxide synthase; 100.0 1.2E-64 4.1E-69 498.0 33.6 304 24-340 121-434 (435)
6 2bpo_A CPR, P450R, NADPH-cytoc 100.0 5.8E-64 2E-68 517.3 27.1 309 22-339 333-682 (682)
7 1ddg_A Sulfite reductase (NADP 100.0 2.1E-60 7.3E-65 459.3 30.4 290 27-339 81-374 (374)
8 1tll_A Nitric-oxide synthase, 100.0 2.1E-60 7.1E-65 491.0 30.0 304 24-340 342-655 (688)
9 3vo2_A Putative uncharacterize 100.0 5.7E-40 2E-44 309.2 18.5 225 102-339 66-310 (310)
10 1fnb_A Ferredoxin-NADP+ reduct 100.0 3.4E-39 1.2E-43 304.2 17.3 225 102-339 70-314 (314)
11 3lo8_A Ferredoxin--NADP reduct 100.0 1.5E-38 5.2E-43 299.3 17.8 225 102-339 61-311 (311)
12 2bmw_A Ferredoxin--NADP reduct 100.0 3E-38 1E-42 296.3 19.4 225 102-339 55-304 (304)
13 2b5o_A FNR, ferredoxin--NADP r 100.0 6.7E-38 2.3E-42 305.2 18.2 225 102-339 156-402 (402)
14 2rc5_A Ferredoxin-NADP reducta 100.0 1.2E-36 4.2E-41 286.6 16.6 224 102-339 64-314 (314)
15 3jqq_A Ferredoxin NADP reducta 100.0 4.4E-34 1.5E-38 269.8 15.7 200 115-339 98-316 (316)
16 1tvc_A Methane monooxygenase c 100.0 2.7E-29 9.3E-34 228.8 14.5 182 102-309 44-232 (250)
17 2r6h_A NADH:ubiquinone oxidore 100.0 3.1E-29 1.1E-33 233.0 12.9 181 115-309 84-277 (290)
18 1qfj_A Protein (flavin reducta 100.0 4.8E-29 1.6E-33 224.4 12.8 177 102-306 30-213 (232)
19 1fdr_A Flavodoxin reductase; f 100.0 3.6E-29 1.2E-33 227.4 10.7 185 102-309 31-229 (248)
20 1krh_A Benzoate 1,2-dioxygenas 100.0 7.8E-29 2.7E-33 235.6 12.4 178 103-309 140-323 (338)
21 2eix_A NADH-cytochrome B5 redu 100.0 7.6E-29 2.6E-33 224.6 10.2 184 102-309 42-233 (243)
22 4eh1_A Flavohemoprotein; struc 100.0 1.2E-28 4.1E-33 223.2 10.7 181 102-309 34-223 (243)
23 1umk_A B5R, NADH-cytochrome B5 100.0 6.5E-29 2.2E-33 229.2 8.6 192 103-309 48-265 (275)
24 4fk8_A Ferredoxin--NADP reduct 99.9 3.7E-29 1.3E-33 230.5 5.2 201 103-339 48-268 (271)
25 1gvh_A Flavohemoprotein; oxido 99.9 4.7E-28 1.6E-32 235.0 11.3 178 102-308 183-377 (396)
26 4g1v_A Flavohemoglobin; three 99.9 1.1E-27 3.9E-32 232.6 12.8 182 102-309 184-378 (399)
27 2bgi_A Ferredoxin-NADP(H) redu 99.9 7.2E-28 2.5E-32 222.3 10.1 185 102-309 44-248 (272)
28 2qdx_A Ferredoxin reductase; o 99.9 4.8E-28 1.7E-32 221.4 7.8 185 102-309 31-234 (257)
29 1cqx_A Flavohemoprotein; globi 99.9 1.7E-27 5.7E-32 231.6 10.2 181 103-308 186-383 (403)
30 2cnd_A NADH-dependent nitrate 99.9 2E-27 6.8E-32 218.6 7.7 193 102-308 43-258 (270)
31 1ep3_B Dihydroorotate dehydrog 99.9 8.1E-27 2.8E-31 214.1 10.1 169 103-308 35-211 (262)
32 2pia_A Phthalate dioxygenase r 99.9 3.6E-26 1.2E-30 215.9 9.0 173 102-308 39-214 (321)
33 2gpj_A Siderophore-interacting 99.8 1.3E-21 4.4E-26 178.6 5.1 166 102-307 39-211 (252)
34 3lrx_A Putative hydrogenase; a 99.8 7.2E-20 2.5E-24 155.6 7.7 126 161-309 1-135 (158)
35 3lyu_A Putative hydrogenase; t 99.8 1.6E-18 5.4E-23 144.7 9.3 121 169-310 3-131 (142)
36 3a1f_A Cytochrome B-245 heavy 99.8 5.2E-19 1.8E-23 152.8 5.5 134 170-310 2-170 (186)
37 3s2u_A UDP-N-acetylglucosamine 63.5 7 0.00024 36.1 4.7 26 185-210 3-30 (365)
38 2lnb_A Z-DNA-binding protein 1 51.9 32 0.0011 24.7 5.3 27 311-337 41-67 (80)
39 3nrs_A Dihydrofolate:folylpoly 43.1 1.7E+02 0.006 27.4 11.0 106 185-306 311-435 (437)
40 1w78_A FOLC bifunctional prote 34.3 2.8E+02 0.0097 25.6 12.3 107 186-308 297-416 (422)
41 1ufm_A COP9 complex subunit 4; 28.8 57 0.002 23.4 3.8 26 310-335 36-61 (84)
42 1p32_A Mitochondrial matrix pr 23.1 53 0.0018 27.9 3.1 43 29-73 159-201 (209)
43 3jv1_A P22 protein; MAM33 fami 21.4 59 0.002 27.0 3.0 43 29-73 134-176 (182)
No 1
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A*
Probab=100.00 E-value=2.6e-70 Score=539.19 Aligned_cols=309 Identities=36% Similarity=0.684 Sum_probs=286.5
Q ss_pred CCCCcCcccHHHHHHhccccCCCCCCHHHHHHHHHhccCHHHHHHHHhhcCC--cCHHHHHHHHHhCCCCHHHHHhhCCC
Q 019521 23 KNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLEVLEDFPS 100 (340)
Q Consensus 23 ~~~~~~~~tl~~~l~~~~dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~--~~~~~~~~~~~~~~~~~~dvl~~fps 100 (340)
+.|+|.++|++++|++|+||++ +|+++||+.||.||+|+.+|++|.+|++. +|.++|.+|+.+++++++|||.+||+
T Consensus 139 ~~p~~~~~tl~~~l~~~~di~~-~p~~~~l~~la~~a~~~~ek~~L~~l~~~~~~~~~~~~~~~~~~~~~ildvL~~fps 217 (458)
T 3qfs_A 139 KHPFPCPTSYRTALTYYLDITN-PPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPS 217 (458)
T ss_dssp CCSSSSSEEHHHHHHHTBCCSS-CCCHHHHHHHGGGBCSHHHHHHHHHHHSCSHHHHHHHHHHTTTTTCCHHHHHHHSTT
T ss_pred CCCCCCCeeHHHHHHhcEeccC-CCCHHHHHHHHHHcCCHHHHHHHHHHhccCcccHHHHHHHHhhcCCCHHHHHHhCCc
Confidence 4679999999999999999999 99999999999999999999999999974 68899999999999999999999999
Q ss_pred CCCCHHHHHHhcCCCCcceeecCCCCCCCCCeEEEEEEEEEecCCCCCccCCCCccccccCCCCCCc------EEEEEee
Q 019521 101 VQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGI------YIPAWFQ 174 (340)
Q Consensus 101 ~~~p~~~l~~~lp~~~pR~YSIaS~p~~~~~~v~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~------~v~v~~~ 174 (340)
+++|+++|++.+|+++||+|||||+|..+++.++|+|++|+|++..++.+.|+||+||+++.+ |+ .|.+.+|
T Consensus 218 ~~~p~~~ll~~lp~l~pR~YSIsSsp~~~~~~i~ltV~vv~~~~~~~r~~~G~~S~~L~~l~~--gg~~~~~~~v~v~~p 295 (458)
T 3qfs_A 218 LRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEP--VGENGGRALVPMFVR 295 (458)
T ss_dssp BCCCHHHHHHHSCBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHHTCCS--SCSSCCCCEEEEEEE
T ss_pred cCCCHHHHHhhCCCCcceeEeeccCcccCCCEEEEEEEEEEecCCCCCCCCCchhHHHHhhcc--CCccCCceEEEEEec
Confidence 999999999999999999999999998778999999999999998888999999999998876 54 6999999
Q ss_pred cCCCCCC-CCCCCeEEEeCCcchhhHHHHHHHHHHhcCCC-CCCCEEEEEeccCC-chhhhHHHHHHhHhcCCCccccCC
Q 019521 175 KGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSG-PAAPIIFFFGCRNE-DDFLYRELWLSHSLNDGVFSEAKG 251 (340)
Q Consensus 175 ~g~F~l~-~~~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~-~~~~~~L~~G~R~~-~d~ly~~eL~~~~~~~g~l~~~~~ 251 (340)
.|.|.+| ++.+|+||||+|||||||++|++++......+ ..++++||||||+. .|++|++||++|.+. +.++
T Consensus 296 ~g~F~lp~~~~~piImIggGTGIAPfrs~lq~r~~l~~~g~~~~~~~Lf~G~R~~~~D~ly~dEl~~l~~~-g~l~---- 370 (458)
T 3qfs_A 296 KSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRD-GALT---- 370 (458)
T ss_dssp CCSCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHHTCCCCCEEEEEEESCTTTSCTTHHHHHHHHHH-TSSS----
T ss_pred CCCcccCCCCCCceEEEcCCcchhhHHHHHHHHHHHHhcCCCCCCEEEEEEeCCchHhhhHHHHHHHHHHc-CCCC----
Confidence 9999999 77899999999999999999999986422111 23789999999997 499999999999988 6665
Q ss_pred CcEEEEEecCCCCccchhhhHHHhHHHHHHhhcCCCEEEEeCCCCccHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHC
Q 019521 252 GGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRA 331 (340)
Q Consensus 252 ~~~~~a~Sr~~~~~~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~a~~~~~~l~~~ 331 (340)
+++++|||++..++||||.+.++.+.+|+++.+++.||||||++.|+++|.++|.+|+++++++++++|++|+++|+++
T Consensus 371 -~l~~a~SRd~~~k~yVqd~l~~~~~~l~~~l~~~~~vYvCGp~~~M~~~V~~~L~~i~~~~g~~~~~~A~~~~~~l~~~ 449 (458)
T 3qfs_A 371 -QLNVAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTK 449 (458)
T ss_dssp -EEEEEETTSSSSCCCHHHHHHHTHHHHHHHHHTTCEEEEEEETTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHT
T ss_pred -EEEEEEECCCCCcccHhHHHHHhHHHHHHHhcCCCEEEEECCCHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHC
Confidence 8999999999889999999999999999999789999999997689999999999999999999999999999999999
Q ss_pred CCEEEeecC
Q 019521 332 GRYHVEAWS 340 (340)
Q Consensus 332 ~R~~~d~w~ 340 (340)
|||++||||
T Consensus 450 ~RY~~Dvws 458 (458)
T 3qfs_A 450 GRYSLDVWS 458 (458)
T ss_dssp TSEEEEEEC
T ss_pred CCeEEEecC
Confidence 999999998
No 2
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A*
Probab=100.00 E-value=8.5e-68 Score=531.47 Aligned_cols=308 Identities=31% Similarity=0.580 Sum_probs=278.3
Q ss_pred CCCcCcccHHHHHHhccccCCCCCCHHHHHHHHHhccCHHHHHHHHhhcCCcCHHHHHHHHHhCCCCHHHHHhhCCCCCC
Q 019521 24 NTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSVQM 103 (340)
Q Consensus 24 ~~~~~~~tl~~~l~~~~dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~~~dvl~~fps~~~ 103 (340)
.++|.++|++++|++|+||++ +|++.||+.||.||+|+.+|++|.+|++++|.++|++|+.+++++++|+|.+||++++
T Consensus 199 ~~~p~~~tl~~~L~~~lDi~~-~p~~~~l~~la~~a~d~~ek~~L~~l~s~~~~~~~~~~~~~~~~~lldvL~~fps~~~ 277 (539)
T 2qtl_A 199 QHIPAGCSLQFIFTWCLEIRA-IPKKAFLRALVDYTSDSAEKRRLQELCSKQGAADYSRFVRDACACLLDLLLAFPSCQP 277 (539)
T ss_dssp TTSCTTCBHHHHHHHTBCTTS-CCCHHHHHHHHTTBCSHHHHHHHHHHHSSTTHHHHHHHTTTTTCCHHHHHHHSTTBCC
T ss_pred CCCCCcccHHHHHHHHhhhcC-CCCHHHHHHHHHHcCCHHHHHHHHHHhChhhHHHHHHHHhhcCCCHHHHHHhCCCcCC
Confidence 458899999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHhcCCCCcceeecCCCCCCCCCeEEEEEEEEEecC--CCCCccCCCCccccccC-----------CCCCCc---
Q 019521 104 PIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTT--PYKRKRTGLCSVWLAGL-----------DPQQGI--- 167 (340)
Q Consensus 104 p~~~l~~~lp~~~pR~YSIaS~p~~~~~~v~l~V~~v~~~~--~~~~~~~G~~S~~L~~l-----------~~~~G~--- 167 (340)
|+++++..+|+++||+|||||+|..+++.++|+|++|+|++ ..++.+.|+||+||+++ ++ |+
T Consensus 278 p~~~ll~~lp~l~~R~YSIsSsp~~~~~~i~ltV~~v~~~~~~~~~~~~~G~~S~~L~~l~~~~~~~~~~~~~--Gd~~~ 355 (539)
T 2qtl_A 278 PLSLLLEHLPKLQPRPYSCASSSLFHPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVASVLQPNIHASH--EDSGK 355 (539)
T ss_dssp CHHHHHHHSCBCCCEEEECCSCTTTSTTEEEEEEECCEEECSCSSCSEEECHHHHHHHHHTTTTC---------------
T ss_pred CHHHHHHhCcCCcceEEeecCCccCCCCEEEEEEEEEEeccCCCCCcCCCCchhhHHHHhhhhhccccccCCC--CCccc
Confidence 99999999999999999999999766899999999999954 34566789999999987 78 99
Q ss_pred ----EEEEEeecC-CCCCC-CCCCCeEEEeCCcchhhHHHHHHHHHHhcCC---CCCCCEEEEEeccCCc-hhhhHHHHH
Q 019521 168 ----YIPAWFQKG-SLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSS---GPAAPIIFFFGCRNED-DFLYRELWL 237 (340)
Q Consensus 168 ----~v~v~~~~g-~F~l~-~~~~pii~Ia~GtGIAPf~s~l~~~~~~~~~---~~~~~~~L~~G~R~~~-d~ly~~eL~ 237 (340)
.|.+.+|.| .|.+| +..+|+||||+|||||||+||++++...... ...++++||||||+++ |++|++||+
T Consensus 356 ~~~~~V~v~~p~g~~F~Lp~~~~~piImIg~GTGIAPfrsflq~r~~~~~~~~~~~~~~v~LffG~R~~~~D~ly~dEL~ 435 (539)
T 2qtl_A 356 ALAPKISIFPRTTNSFHLPDDPSIPIIMVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMWLFFGCRHKDRDYLFRKELR 435 (539)
T ss_dssp -CCCEEEEEECSCCCCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHHCTTCCCCCEEEEEEESCTTTCCTTHHHHH
T ss_pred cCceEEEEEeeeCCCccCCccCCCCEEEEEcCccHHHHHHHHHHHHHHHhccccCCCCCEEEEEEECCcchhhHHHHHHH
Confidence 999999986 89999 7789999999999999999999998654311 1238999999999995 999999999
Q ss_pred HhHhcCCCccccCCCcEEEEEecCCC------CccchhhhHHHhHHHHHHhh-cCCCEEEEeCCCCccHHHHHHHHHHHH
Q 019521 238 SHSLNDGVFSEAKGGGFYVAFSRKQP------QKVYVQHKMLEQSQRIWNLL-LSKASIYVAGSATKMPSDVWSTFEEIV 310 (340)
Q Consensus 238 ~~~~~~g~l~~~~~~~~~~a~Sr~~~------~~~yVqd~l~~~~~~l~~~l-~~~~~iyvCG~~~~M~~~v~~~L~~i~ 310 (340)
+|.+. +.+. +++++|||++. .++||||.|.+..+.+|+++ .++++||||||++.|+++|.++|.+++
T Consensus 436 ~~~~~-g~~~-----~l~~afSRd~~~~~~~g~k~yVqd~l~e~~~~l~~~l~~~~a~vYVCGp~~~M~~~V~~~L~~i~ 509 (539)
T 2qtl_A 436 HFLKH-GILT-----HLKVSFSRDAPVGEEEAPAKYVQDNIQLHGQQVARILLQENGHIYVCGDAKNMAKDVHDALVQII 509 (539)
T ss_dssp HHHHT-TSSC-----EEEEEESSSCC------CCCSHHHHHHHTHHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHHH
T ss_pred HHHHh-CCCc-----EEEEEEccCCCccccCCCccchhHHHHHhHHHHHHhhccCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence 99987 5443 89999999976 68999999999999999998 458999999997689999999999999
Q ss_pred HHhCCCCHHHHHHHHHHHHHCCCEEEeecC
Q 019521 311 SKEGEASRDSAANWLKALQRAGRYHVEAWS 340 (340)
Q Consensus 311 ~~~~~~~~~~a~~~~~~l~~~~R~~~d~w~ 340 (340)
++++++++++|++|+++|+++|||++||||
T Consensus 510 ~~~~~~~~~~A~~~l~~l~~~~RY~~Dvw~ 539 (539)
T 2qtl_A 510 SKEVGVEKLEAMKTLATLKEEKRYLQDIWS 539 (539)
T ss_dssp HHHHTCCHHHHHHHHHHHHHTTSEEEEEC-
T ss_pred HHhCCCCHHHHHHHHHHHHHCCcEEEEcCC
Confidence 999999999999999999999999999997
No 3
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=100.00 E-value=1.1e-67 Score=539.77 Aligned_cols=310 Identities=37% Similarity=0.693 Sum_probs=288.3
Q ss_pred CCCCcCcccHHHHHHhccccCCCCCCHHHHHHHHHhccCHHHHHHHHhhc--CCcCHHHHHHHHHhCCCCHHHHHhhCCC
Q 019521 23 KNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFA--SPEGRDDLYKYNQKERRTVLEVLEDFPS 100 (340)
Q Consensus 23 ~~~~~~~~tl~~~l~~~~dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~--~~~~~~~~~~~~~~~~~~~~dvl~~fps 100 (340)
+.|+|.|+|++++|++|+||++ +|+++||+.||.||+|+.+|++|.+|+ +++|.++|++|+.+++++++|+|.+||+
T Consensus 299 ~~~~p~~~tl~~~l~~~~di~~-~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~~~i~dvL~~fps 377 (618)
T 3qe2_A 299 KHPFPCPTSYRTALTYYLDITN-PPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPS 377 (618)
T ss_dssp CSSSSSSEEHHHHHHHTBCCSS-CCCHHHHHHHGGGBCSHHHHHHHHHTTCSSSHHHHHHHHHTTTTTCCHHHHHHHSTT
T ss_pred CCCCCCceEHHHhhhhEeecCC-CCcHHHHHHHHHHcCCHHHHHHHHHhhccChhhHHHHHHHHhhcCCCHHHHHHhCCc
Confidence 4679999999999999999999 999999999999999999999999999 6789999999999999999999999999
Q ss_pred CCCCHHHHHHhcCCCCcceeecCCCCCCCCCeEEEEEEEEEecCCCCCccCCCCccccccCCCCCCc-----EEEEEeec
Q 019521 101 VQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGI-----YIPAWFQK 175 (340)
Q Consensus 101 ~~~p~~~l~~~lp~~~pR~YSIaS~p~~~~~~v~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~-----~v~v~~~~ 175 (340)
+++|+++|+..+|+++||+|||||+|..+++.++|+|++|.|+++.++.+.|+||+||+++.+. |+ .|.+.+|.
T Consensus 378 ~~~p~~~l~~~lp~l~pR~YSIsSsp~~~~~~i~ltv~vv~~~~~~~~~~~G~~S~~L~~l~~~-Gd~~~~~~v~v~~p~ 456 (618)
T 3qe2_A 378 LRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEPV-GENGGRALVPMFVRK 456 (618)
T ss_dssp BCCCHHHHHHHSCBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHHTCCCC------CCEEEEEEEC
T ss_pred cCCCHHHHHHhccccccceeccccCCcCCCCEEEEEEEEEEEecCCCCCCCCcccHHHHhhccc-CCCCcceEEEEEEec
Confidence 9999999999999999999999999987789999999999999988889999999999987541 66 99999999
Q ss_pred CCCCCC-CCCCCeEEEeCCcchhhHHHHHHHHHHhcCCC-CCCCEEEEEeccCCc-hhhhHHHHHHhHhcCCCccccCCC
Q 019521 176 GSLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSG-PAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGG 252 (340)
Q Consensus 176 g~F~l~-~~~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~-~~~~~~L~~G~R~~~-d~ly~~eL~~~~~~~g~l~~~~~~ 252 (340)
|.|.+| ++.+|+||||+|||||||+||++++......+ ..++++||||||+++ |++|++||++|.+. |.++
T Consensus 457 g~F~lp~~~~~piimIg~GtGIAPfrs~l~~r~~~~~~g~~~~~~~L~~G~R~~~~D~ly~~el~~~~~~-g~l~----- 530 (618)
T 3qe2_A 457 SQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRD-GALT----- 530 (618)
T ss_dssp CSCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHTTCCCCCEEEEEEESCTTTSCTTHHHHHHHHHH-TSSS-----
T ss_pred CcccCCCCCCCCeEEEcCCcchhhHHHHHHHHHHHHhcCCCCCCEEEEEecCCCccccchHHHHHHHHhc-CCCc-----
Confidence 999999 77899999999999999999999998643222 247899999999996 99999999999988 7776
Q ss_pred cEEEEEecCCCCccchhhhHHHhHHHHHHhhcCCCEEEEeCCCCccHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCC
Q 019521 253 GFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAG 332 (340)
Q Consensus 253 ~~~~a~Sr~~~~~~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~ 332 (340)
+++++|||++.+++||||.+.++.+.+++++.+++.||||||++.|+++|.++|.+++++++++++++|++|+++|+++|
T Consensus 531 ~l~~a~Srd~~~k~yVqd~l~~~~~~l~~~l~~~a~vYvCGp~~~M~~~V~~~L~~i~~~~g~~~~~~a~~~~~~l~~~~ 610 (618)
T 3qe2_A 531 QLNVAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKG 610 (618)
T ss_dssp EEEEEETTSSSSCCCHHHHHHHTHHHHHHHHHHTCEEEEEEETTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTT
T ss_pred EEEEEEcCCCCCCCcHHHHHHHhHHHHHHHHhCCcEEEEECCchHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 89999999998899999999999999999886699999999976999999999999999999999999999999999999
Q ss_pred CEEEeecC
Q 019521 333 RYHVEAWS 340 (340)
Q Consensus 333 R~~~d~w~ 340 (340)
||++||||
T Consensus 611 RY~~Dv~s 618 (618)
T 3qe2_A 611 RYSLDVWS 618 (618)
T ss_dssp SEEEEEEC
T ss_pred CeEEeecC
Confidence 99999998
No 4
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=100.00 E-value=6.7e-67 Score=507.46 Aligned_cols=304 Identities=30% Similarity=0.508 Sum_probs=274.6
Q ss_pred CCCCcCcccHHHHHHhccccCCCCCCHHHHHHHHHhccCHHHHHHHHhhcCCcCHHHHHHHHHhCCCCHHHHHhhCCCCC
Q 019521 23 KNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSVQ 102 (340)
Q Consensus 23 ~~~~~~~~tl~~~l~~~~dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~~~dvl~~fps~~ 102 (340)
+.|++.|+|++++|++ +||++ +|+++||+.||.||+|+.+|++|++|++. ++|.+++..++++++|+|.+||+++
T Consensus 82 ~~p~~~~~tl~~~l~~-~di~~-~~~~~~l~~la~~~~~~~~~~~L~~l~~~---~~~~~~~~~~~~~~ldvL~~fps~~ 156 (393)
T 4dql_A 82 HLPLAKTVSVEELLQY-VELQD-PVTRTQLRAMAAKTVCPPHKVELEALLEK---QAYKEQVLAKRLTMLELLEKYPACE 156 (393)
T ss_dssp -----CCEEHHHHTTS-BCSSS-BCCHHHHHHHHHTCCSHHHHHHHHHTTSH---HHHHHHTTTTTCBHHHHHHHCTTCC
T ss_pred cCCCCCcEEHHHHHHh-ccccC-CCCHHHHHHHHHhCCCHHHHHHHHHHhCc---hHHHHHHhccCCCHHHHHHhCCCCC
Confidence 3467789999999999 99999 99999999999999999999999999873 3799999999999999999999999
Q ss_pred CCHHHHHHhcCCCCcceeecCCCCCCCCCeEEEEEEEEEecCCCCC-ccCCCCccccccCCCCCCcEEEE--EeecCCCC
Q 019521 103 MPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKR-KRTGLCSVWLAGLDPQQGIYIPA--WFQKGSLP 179 (340)
Q Consensus 103 ~p~~~l~~~lp~~~pR~YSIaS~p~~~~~~v~l~V~~v~~~~~~~~-~~~G~~S~~L~~l~~~~G~~v~v--~~~~g~F~ 179 (340)
+|+++++..+|+++||+|||||+|..+++.++|+|+++.+++..++ .+.|.||+||+++++ |+.|.+ .+|.|.|.
T Consensus 157 ~p~~~~l~~lp~l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~G~~S~~L~~l~~--Gd~v~v~v~~P~g~F~ 234 (393)
T 4dql_A 157 MKFSEFIALLPSIRPRYYSISSSPRVDEKQASITVSVVSGEAWSGYGEYKGIASNYLAELQE--GDTITCFISTPQSEFT 234 (393)
T ss_dssp CCHHHHHHTSCBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSSSEEECHHHHHHHHCCT--TCEEEEEEECCSSCCC
T ss_pred CCHHHHHHhCCCCcceeeeccccccccCceEEEEEEEEecccCCCCcccCCccchhHHhCCC--cCEEEEEEEcCCCCcc
Confidence 9999999999999999999999998778999999999999875543 356999999999999 999994 56789999
Q ss_pred CC-CCCCCeEEEeCCcchhhHHHHHHHHHHhcCCC-CCCCEEEEEeccCC-chhhhHHHHHHhHhcCCCccccCCCcEEE
Q 019521 180 RP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSG-PAAPIIFFFGCRNE-DDFLYRELWLSHSLNDGVFSEAKGGGFYV 256 (340)
Q Consensus 180 l~-~~~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~-~~~~~~L~~G~R~~-~d~ly~~eL~~~~~~~g~l~~~~~~~~~~ 256 (340)
+| +..+|+||||+|||||||+||++++......+ ..++++||||||++ .|++|++||+++.+. |.+ ++++
T Consensus 235 lp~~~~~piImIg~GtGIAPf~s~l~~r~~~~~~g~~~~~v~L~~G~R~~~~d~ly~~el~~~~~~-~~l------~l~~ 307 (393)
T 4dql_A 235 LPKDPETPLIMVGPGTGVAPFRGFVQARKQLKEQGQSLGEAHLYFGCRSPHEDYLYQEELENAQSE-GII------TLHT 307 (393)
T ss_dssp CCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHTTCCCCCEEEEEEESCTTTCCTTHHHHHHHHHT-TSC------EEEE
T ss_pred cCccCCCCeEEEccCceechHHHHHHHHHHHHhcCCCCCCEEEEEEECCcchhhHHHHHHHHHHhC-CCe------EEEE
Confidence 99 77889999999999999999999976543222 24789999999996 599999999999988 999 9999
Q ss_pred EEec-CCCCccchhhhHHHhHHHHHHhhcCCCEEEEeCCCCccHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCEE
Q 019521 257 AFSR-KQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335 (340)
Q Consensus 257 a~Sr-~~~~~~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~R~~ 335 (340)
+||| ++..++||||.+.++.+.+++++.++++||||||+..|+++|.++|.+++++++|++.++|++|+++|+++|||+
T Consensus 308 a~Sr~~~~~k~yVq~~l~~~~~~l~~~l~~~~~vYvCGp~~~M~~~V~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~Ry~ 387 (393)
T 4dql_A 308 AFSRMPNQPKTYVQHVMEQDGKKLIELLDQGAHFYICGDGSQMAPAVEATLMKSYADVHQVSEADARLWLQQLEEKGRYA 387 (393)
T ss_dssp EESSCTTSCCCCHHHHHHHTHHHHHHHHHTTCEEEEEEETTTHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHTTCEE
T ss_pred EEeCCCCCCCcchhhHHHhCHHHHHHHHhCCcEEEEECCchhhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHCCCEE
Confidence 9999 555789999999999999999988899999999976999999999999999999999999999999999999999
Q ss_pred EeecC
Q 019521 336 VEAWS 340 (340)
Q Consensus 336 ~d~w~ 340 (340)
+||||
T Consensus 388 ~dv~s 392 (393)
T 4dql_A 388 KDVWA 392 (393)
T ss_dssp EEEEC
T ss_pred EEecc
Confidence 99997
No 5
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=100.00 E-value=1.2e-64 Score=498.03 Aligned_cols=304 Identities=34% Similarity=0.627 Sum_probs=276.9
Q ss_pred CCCcCcccHHHHHHhccccCCCCCCHHHHHHHHHhccCHHHHHHHHhhcCCcCHHHHHHHHHhCCCCHHHHHhhCCCCCC
Q 019521 24 NTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSVQM 103 (340)
Q Consensus 24 ~~~~~~~tl~~~l~~~~dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~~~dvl~~fps~~~ 103 (340)
.++| ++|++++|++|+||++ +|+++||+.||.||+|+.+|++|++|++ +.++|.+|+...+++++|+|.+||++++
T Consensus 121 ~~~p-~~tl~~~l~~~~di~~-~p~~~~l~~la~~~~~~~~k~~L~~l~~--~~~~~~~~~~~~~~~i~~vl~~fps~~~ 196 (435)
T 1f20_A 121 SRLP-PCTIFQAFKYYLDITT-PPTPLQLQQFASLATNEKEKQRLLVLSK--GLQEYEEWKWGKNPTMVEVLEEFPSIQM 196 (435)
T ss_dssp CSSC-SBCHHHHHHHTBCCSS-CCCHHHHHHHHTTBCCHHHHHHHHHHTT--CSHHHHHHHHHHCCCHHHHHHHSTTBCB
T ss_pred CCCC-CccHHHHHHhceecCC-CCCHHHHHHHHHHCCCHHHHHHHHHhhc--CHHHHHHHHhccCCCHHHHHHhCCcCCC
Confidence 4577 9999999999999999 9999999999999999999999999997 7889999999999999999999999999
Q ss_pred CHHHHHHhcCCCCcceeecCCCCCCCCCeEEEEEEEEEecCCCC--CccCCCCccccccCCCCCCcEEEEEee-cCCCCC
Q 019521 104 PIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYK--RKRTGLCSVWLAGLDPQQGIYIPAWFQ-KGSLPR 180 (340)
Q Consensus 104 p~~~l~~~lp~~~pR~YSIaS~p~~~~~~v~l~V~~v~~~~~~~--~~~~G~~S~~L~~l~~~~G~~v~v~~~-~g~F~l 180 (340)
|+++++..+|++++|+|||||+|..+++.++|+|++++|.++.+ +.+.|.||+||.++++ |+.|.+.++ .|.|.+
T Consensus 197 p~~~l~~~lp~l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~~G~~S~~L~~l~~--Gd~v~v~~~~~g~F~l 274 (435)
T 1f20_A 197 PATLLLTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRIQA--DDVVPCFVRGAPSFHL 274 (435)
T ss_dssp CHHHHHHHSCBCCCEEEECCSCTTTSTTEEEEEEECCEEECGGGTSCEEECHHHHHHTTCCT--TCEEEEEEECCTTSSC
T ss_pred CHHHHHHhCCCCCCccccccCCcccCCCeEEEEEEEEEEecCCCCCcccCCccchhHhhCCC--CCEEEEEEecCCCccC
Confidence 99999999999999999999999766799999999999977543 4568999999999999 999999995 569999
Q ss_pred C-CCCCCeEEEeCCcchhhHHHHHHHHHHhcC--CCCCCCEEEEEeccCCc-hhhhHHHHHHhHhcCCCccccCCCcEEE
Q 019521 181 P-PPSVPLILIGPGTGCAPFRGFVEERAIQSS--SGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYV 256 (340)
Q Consensus 181 ~-~~~~pii~Ia~GtGIAPf~s~l~~~~~~~~--~~~~~~~~L~~G~R~~~-d~ly~~eL~~~~~~~g~l~~~~~~~~~~ 256 (340)
| +..+|+||||+|||||||+||++++..... ....++++||||||+++ |++|++||+++.+. +.+. ++++
T Consensus 275 p~~~~~piilIagGtGIAP~~s~l~~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~El~~~~~~-~~~~-----~l~~ 348 (435)
T 1f20_A 275 PRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGMNPCPMVLVFGCRQSKIDHIYREETLQAKNK-GVFR-----ELYT 348 (435)
T ss_dssp CSCTTSCEEEECCGGGGHHHHHHHHHHHHHHHHHCCCCCCEEEEEEESCTTTSCTTHHHHHHHHHT-TSEE-----EEEE
T ss_pred CCCCCCCEEEEECCcCcHHHHHHHHHHHHhhhhccCCCCCEEEEEeecccccchhHHHHHHHHHHc-CCcc-----EEEE
Confidence 9 778999999999999999999999987420 00138899999999998 99999999999887 5543 8999
Q ss_pred EEecCCCC-ccchhhhHHHh-HHHHHHhhc-CCCEEEEeCCCCccHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCC
Q 019521 257 AFSRKQPQ-KVYVQHKMLEQ-SQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGR 333 (340)
Q Consensus 257 a~Sr~~~~-~~yVqd~l~~~-~~~l~~~l~-~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~R 333 (340)
+|||++.. ++|||+.+.+. .+.+++++. +++.||||||+ .|+++|.++|.+++++++++++++|++|+++|+++||
T Consensus 349 a~Sr~~~~~k~yVq~~l~~~l~~~~~~~l~~~~~~vYvCGp~-~M~~~V~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~R 427 (435)
T 1f20_A 349 AYSREPDRPKKYVQDVLQEQLAESVYRALKEQGGHIYVCGDV-TMAADVLKAIQRIMTQQGKLSEEDAGVFISRLRDDNR 427 (435)
T ss_dssp EESSCTTSCCCCHHHHHHHHSHHHHHHHHHTSCCEEEEEECH-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTC
T ss_pred EECCCCCCCCcchhhHHHhhhHHHHHHHHhcCCcEEEEeCCh-hHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCCC
Confidence 99998764 89999999988 788888774 58999999999 9999999999999999999999999999999999999
Q ss_pred EEEeecC
Q 019521 334 YHVEAWS 340 (340)
Q Consensus 334 ~~~d~w~ 340 (340)
|++|||+
T Consensus 428 Y~~Dv~~ 434 (435)
T 1f20_A 428 YHEDIFG 434 (435)
T ss_dssp EEEEECC
T ss_pred EEEEecC
Confidence 9999997
No 6
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=100.00 E-value=5.8e-64 Score=517.29 Aligned_cols=309 Identities=30% Similarity=0.536 Sum_probs=276.3
Q ss_pred CCCCCcCcccHHHHHHhccccCCCCCCHHHHHHHHHhccCHHHHHHHHhhcCCcCHHHHHHHHHhCCCCHHHHHhhCC--
Q 019521 22 HKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFP-- 99 (340)
Q Consensus 22 ~~~~~~~~~tl~~~l~~~~dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~~~dvl~~fp-- 99 (340)
.+.|+|.++|++++|++|+||++ +|+++||+.||.||+|+.+|++|++|+ ++.++|.+|+.+++++++|+|.+||
T Consensus 333 ~~~p~p~~~tl~~~l~~~ldi~~-~p~~~~l~~la~~a~~~~~k~~L~~l~--~~~~~~~~~~~~~~~~i~dvL~~fp~~ 409 (682)
T 2bpo_A 333 VKVPFPTPTTIGAAIKHYLEITG-PVSRQLFSSLIQFAPNADVKEKLTLLS--KDKDQFAVEITSKYFNIADALKYLSDG 409 (682)
T ss_dssp CCCSSCSSEEHHHHHHHTBCCSS-CCCHHHHHHHSTTCSSHHHHHHHHHHT--TCHHHHHHHTGGGTCCHHHHHHHHHTT
T ss_pred cCCCCCCCccHHHHHHHhhhccC-CCCHHHHHHHHHHCCCHHHHHHHHHhc--cCHHHHHHHHhcCCCCHHHHHHhccCc
Confidence 35679999999999999999999 999999999999999999999999999 5999999999999999999999999
Q ss_pred --CCCCCHHHHHHhcCCCCcceeecCCCCCCCCCeEEEEEEEEEecCCC---CCccCCCCccccccCCCC----------
Q 019521 100 --SVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPY---KRKRTGLCSVWLAGLDPQ---------- 164 (340)
Q Consensus 100 --s~~~p~~~l~~~lp~~~pR~YSIaS~p~~~~~~v~l~V~~v~~~~~~---~~~~~G~~S~~L~~l~~~---------- 164 (340)
++++|+++++..+|+++||+|||||+|..+++.++|+|++++|+++. ++.+.|+||+||.++++.
T Consensus 410 ~~s~~~p~~~l~~~lp~l~~R~YSIsSsp~~~~~~i~ltv~Vv~~~~~~~~~~~~~~G~~S~~L~~l~~g~~~~~~~~~~ 489 (682)
T 2bpo_A 410 AKWDTVPMQFLVESVPQMTPRYYSISSSSLSEKQTVHVTSIVENFPNPELPDAPPVVGVTTNLLRNIQLAQNNVNIAETN 489 (682)
T ss_dssp CCCTTSCHHHHHHHSCBCCCEEEEBCSCTTTCTTEEEEEEECCEECCSSCTTSCCEECHHHHHHHHHHHHHTTCCTTTSC
T ss_pred ccccCCCHHHHHHhCcccccccccccCCcccCCCeEEEEEEEEEEecCcccCCcccCccccHHHHhcccccccccccccc
Confidence 89999999999999999999999999987789999999999999876 677899999999876540
Q ss_pred CCc--------------EEEEEeecCCCCCC-CCCCCeEEEeCCcchhhHHHHHHHHHHhcC------CC-CCCCEEEEE
Q 019521 165 QGI--------------YIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSS------SG-PAAPIIFFF 222 (340)
Q Consensus 165 ~G~--------------~v~v~~~~g~F~l~-~~~~pii~Ia~GtGIAPf~s~l~~~~~~~~------~~-~~~~~~L~~ 222 (340)
.|+ .|.+.++.+.|++| ++.+|+||||+|||||||+||++++..... .+ ..++++|||
T Consensus 490 ~G~~v~i~GP~G~f~~~~v~v~vr~~~F~Lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~~~~~~~g~~~~~~~L~f 569 (682)
T 2bpo_A 490 LPVHYDLNGPRKLFANYKLPVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFLESQKKGGNNVSLGKHILFY 569 (682)
T ss_dssp CCCCCCSSCGGGTTTTTEECEEEECCSCCCCSSTTSCEEEEEEGGGGHHHHHHHHHHHHHHHTCC----CCCCCCEEEEE
T ss_pred cccceeeccCcCcccCceEEEEEecCcccCCCCCCCCEEEEecCcChHHHHHHHHHHHHhhcccccccccCCcCCEEEEE
Confidence 033 45555555567888 678999999999999999999999987643 11 248999999
Q ss_pred eccCCchhhhHHHHHHhH-hcCCCccccCCCcEEEEEec-CCCCccchhhhHHHhHHHHHHhhcCCCEEEEeCCCCccHH
Q 019521 223 GCRNEDDFLYRELWLSHS-LNDGVFSEAKGGGFYVAFSR-KQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPS 300 (340)
Q Consensus 223 G~R~~~d~ly~~eL~~~~-~~~g~l~~~~~~~~~~a~Sr-~~~~~~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~ 300 (340)
|||++.|++|++||++|. +....+ +++++||| ++..++||||.|.+..+.+++++.++++||||||+..|++
T Consensus 570 G~R~~~D~ly~dEl~~~~~~~g~~~------~l~~afSr~d~~~k~yVqd~l~e~~~~l~~~l~~~~~vYvCGpa~~M~~ 643 (682)
T 2bpo_A 570 GSRNTDDFLYQDEWPEYAKKLDGSF------EMVVAHSRLPNTKKVYVQDKLKDYEDQVFEMINNGAFIYVCGDAKGMAK 643 (682)
T ss_dssp EESSSSSCTTTTTHHHHHHHHGGGE------EEEEEESCCTTSCCCCHHHHHHHTHHHHHHHHTTTCEEEEEECSTTHHH
T ss_pred ecCChhhhhhHHHHHHHHHhcCCce------EEEEEECCCCCCCCcchHHHHHhhHHHHHHHHhCCcEEEEeCCchHhHH
Confidence 999999999999999995 441345 89999999 5567999999999999999999877999999999449999
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCEEEeec
Q 019521 301 DVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAW 339 (340)
Q Consensus 301 ~v~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~R~~~d~w 339 (340)
+|.++|.+++++++++++++|++|+++|+++|||++|||
T Consensus 644 ~V~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~Ry~~Dvw 682 (682)
T 2bpo_A 644 GVSTALVGILSRGKSITTDEATELIKMLKTSGRYQEDVW 682 (682)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEC
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCEEEEeC
Confidence 999999999999999999999999999999999999999
No 7
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=100.00 E-value=2.1e-60 Score=459.35 Aligned_cols=290 Identities=30% Similarity=0.535 Sum_probs=262.1
Q ss_pred cCcccHHHHHHhccccCCCCCCHHHHHHHHHhccCHHHHHHHHhhcCCcCHHHHHHHHHhCCCCHHHHHhhCCCCCCCHH
Q 019521 27 EVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSVQMPID 106 (340)
Q Consensus 27 ~~~~tl~~~l~~~~dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~~~dvl~~fps~~~p~~ 106 (340)
+.++|++++|++|+||+. |+++||+.||.||+|+. |.+|++ +.+.|.+|+. +++++|+|.+||+ .++..
T Consensus 81 ~~~~tl~~~l~~~~di~~--p~~~~l~~la~~~~~~~----L~~l~~--~~~~~~~~~~--~~~~~~vl~~~p~-~~~~G 149 (374)
T 1ddg_A 81 GKTLPLNEALQWHFELTV--NTANIVENYATLTRSET----LLPLVG--DKAKLQHYAA--TTPIVDMVRFSPA-QLDAE 149 (374)
T ss_dssp TEEEEHHHHHHHHBCCSC--CCHHHHHHHHHHHTCTT----TGGGTT--CTHHHHHHHH--HSCHHHHHHHSCC-CCCHH
T ss_pred CCCccHHHHHHhcccCCC--CCHHHHHHHHHHCCCHH----HHHHhc--ChHHHHHHHc--CCCHHHHHHHCCC-CCCHH
Confidence 358999999999999994 79999999999999974 888885 7788999987 5899999999998 66666
Q ss_pred HHHHhcCCCCcceeecCCCCCCCCCeEEEEEEEEEecCCCCCccCCCCcccccc-CCCCCCcEEEEEeec-CCCCCC-CC
Q 019521 107 WLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAG-LDPQQGIYIPAWFQK-GSLPRP-PP 183 (340)
Q Consensus 107 ~l~~~lp~~~pR~YSIaS~p~~~~~~v~l~V~~v~~~~~~~~~~~G~~S~~L~~-l~~~~G~~v~v~~~~-g~F~l~-~~ 183 (340)
.++..++++.+|+|||||+|..+++.++|+|++|.|.+. ++.+.|.||+||++ +++ |+.|.+.+|. |.|.+| +.
T Consensus 150 q~v~l~~~~~~R~YSIaSsp~~~~~~i~l~V~~v~~~~~-~~~~~G~~S~~L~~~l~~--Gd~v~v~~~~~g~F~lp~~~ 226 (374)
T 1ddg_A 150 ALINLLRPLTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEE--EGEVRVFIEHNDNFRLPANP 226 (374)
T ss_dssp HHHHHSCBCCCEEEEBCCCTTTSCSEEEEEEEECEEEET-TEEEECHHHHHHHHSCCS--SCEEEEEEECCTTSCCCSST
T ss_pred HHHhhccCCCCccceecCCCCCCCCEEEEEEEEEEeecC-CCCCCCCchHHHHhcCCC--CCEEEEEEeeCCCccCCCCC
Confidence 667777889999999999997667999999999999885 66678999999997 999 9999999955 589998 77
Q ss_pred CCCeEEEeCCcchhhHHHHHHHHHHhcCCCCCCCEEEEEeccCC-chhhhHHHHHHhHhcCCCccccCCCcEEEEEecCC
Q 019521 184 SVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNE-DDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ 262 (340)
Q Consensus 184 ~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~-~d~ly~~eL~~~~~~~g~l~~~~~~~~~~a~Sr~~ 262 (340)
.+|+||||+|||||||+||++++...... ++++||||||++ .|++|++||+++.+. +.+. +++++|||++
T Consensus 227 ~~piimIa~GtGIAP~~s~l~~~~~~~~~---~~~~L~~G~R~~~~d~ly~~El~~~~~~-~~~~-----~l~~a~Srd~ 297 (374)
T 1ddg_A 227 ETPVIMIGPGTGIAPFRAFMQQRAADEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKE-GVLT-----RIDLAWSRDQ 297 (374)
T ss_dssp TSCEEEECCGGGGHHHHHHHHHHHHHTCC---SCEEEEEEESCHHHHCTTHHHHHHHHHT-TSCC-----EEEEEETTSS
T ss_pred CCCEEEEECCccHHHHHHHHHHHHhcCCC---CCEEEEEEeCCchhhhhHHHHHHHHHHh-CCCc-----EEEEEEecCC
Confidence 89999999999999999999999887654 889999999998 499999999999887 5443 8999999998
Q ss_pred CCccchhhhHHHhHHHHHHhhcCCCEEEEeCCCCccHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCEEEeec
Q 019521 263 PQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAW 339 (340)
Q Consensus 263 ~~~~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~R~~~d~w 339 (340)
..++|||+.+.+..+.+++++.++++|||||++.+|+++|.++|.+++++++++++++|++|+++|+++|||++|||
T Consensus 298 ~~k~yVq~~l~~~~~~l~~~l~~~~~vYvCG~p~~M~~~V~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~Ry~~dv~ 374 (374)
T 1ddg_A 298 KEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 374 (374)
T ss_dssp SSCCCHHHHHHHTHHHHHHHHHTTCEEEEEECTTTHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCccHHHHHHHhHHHHHHHHhCCcEEEEECCCHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCeEEecC
Confidence 88999999999998999998877999999993349999999999999999999999999999999999999999999
No 8
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=100.00 E-value=2.1e-60 Score=490.99 Aligned_cols=304 Identities=34% Similarity=0.626 Sum_probs=276.4
Q ss_pred CCCcCcccHHHHHHhccccCCCCCCHHHHHHHHHhccCHHHHHHHHhhcCCcCHHHHHHHHHhCCCCHHHHHhhCCCCCC
Q 019521 24 NTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSVQM 103 (340)
Q Consensus 24 ~~~~~~~tl~~~l~~~~dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~~~dvl~~fps~~~ 103 (340)
.++| ++|++++|++|+||++ +|+++||+.||.||+|+.+|++|++|++ +.++|.+|+...+++++|+|.+||++++
T Consensus 342 ~~~p-~~tl~~~l~~~lDi~~-~p~~~~l~~la~~a~~~~ek~~L~~l~~--~~~~~~~~~~~~~~~i~evl~~fps~~~ 417 (688)
T 1tll_A 342 SRLP-PCTIFQAFKYYLDITT-PPTPLQLQQFASLATNEKEKQRLLVLSK--GLQEYEEWKWGKNPTMVEVLEEFPSIQM 417 (688)
T ss_dssp CSSC-SBCHHHHHHHTBCCSS-CCCHHHHHHHHTTBCCHHHHHHHHHHTT--CSHHHHHHHHHHCCCHHHHHHHSTTBCC
T ss_pred CCCC-CccHHHHHHhheeCCC-CCCHHHHHHHHHHcCCHHHHHHHHHHhc--CHHHHHHHHhhcCCCHHHHHHhCCCcCC
Confidence 4577 9999999999999999 9999999999999999999999999997 7889999999999999999999999999
Q ss_pred CHHHHHHhcCCCCcceeecCCCCCCCCCeEEEEEEEEEecCCCC--CccCCCCccccccCCCCCCcEEEEEee-cCCCCC
Q 019521 104 PIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYK--RKRTGLCSVWLAGLDPQQGIYIPAWFQ-KGSLPR 180 (340)
Q Consensus 104 p~~~l~~~lp~~~pR~YSIaS~p~~~~~~v~l~V~~v~~~~~~~--~~~~G~~S~~L~~l~~~~G~~v~v~~~-~g~F~l 180 (340)
|+++++..+|++.+|+|||||+|..+++.++|+|+++.|.++.+ +.+.|.||+||.++++ |+.|.+.++ .|.|.+
T Consensus 418 p~~~l~~~lp~l~~R~YSIsSsp~~~~~~i~l~V~vv~~~~~~g~~~~~~G~~S~~L~~l~~--Gd~v~v~~~p~g~F~l 495 (688)
T 1tll_A 418 PATLLLTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRIQA--DDVVPCFVRGAPSFHL 495 (688)
T ss_dssp CHHHHHHHSCBCCCEEEEBCSCTTTSTTEEEEEEECCEEETGGGTSCEEECHHHHHHTTCCT--TSEEEEEEECCGGGSC
T ss_pred CHHHHHHhCcccceeEEeecCCcccCCCeEEEEEEEEEEecCCCCCCcCCCchhHHHHhCCC--CCEEEEEeccCCCccc
Confidence 99999999999999999999999766799999999999976543 4568999999999999 999999995 459999
Q ss_pred C-CCCCCeEEEeCCcchhhHHHHHHHHHHhcC--CCCCCCEEEEEeccCCc-hhhhHHHHHHhHhcCCCccccCCCcEEE
Q 019521 181 P-PPSVPLILIGPGTGCAPFRGFVEERAIQSS--SGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYV 256 (340)
Q Consensus 181 ~-~~~~pii~Ia~GtGIAPf~s~l~~~~~~~~--~~~~~~~~L~~G~R~~~-d~ly~~eL~~~~~~~g~l~~~~~~~~~~ 256 (340)
| +..+|+||||+|||||||++|++++..... .+..++++||||||+++ |++|++||+++.+. +.+. ++++
T Consensus 496 p~~~~~piIlIagGtGIAP~~s~l~~~~~~~~~~~~~~~~v~L~~G~R~~~~D~ly~dEL~~~~~~-~~~~-----~l~~ 569 (688)
T 1tll_A 496 PRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGMNPCPMVLVFGCRQSKIDHIYREETLQAKNK-GVFR-----ELYT 569 (688)
T ss_dssp CSCTTSCEEEEEEGGGGTTHHHHHHHHHHHHHHSCCCCCCEEEEEEESCTTTTCTTHHHHHHHHHT-TSEE-----EEEE
T ss_pred CcCCCCCEEEEEcCcchHHHHHHHHHHHHhhhhccCCCCCEEEEEEeccchhhhhHHHHHHHHHHc-CCce-----EEEE
Confidence 8 678999999999999999999999987521 01238899999999998 99999999999887 5443 8999
Q ss_pred EEecCCCC-ccchhhhHHHh-HHHHHHhh-cCCCEEEEeCCCCccHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCC
Q 019521 257 AFSRKQPQ-KVYVQHKMLEQ-SQRIWNLL-LSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGR 333 (340)
Q Consensus 257 a~Sr~~~~-~~yVqd~l~~~-~~~l~~~l-~~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~R 333 (340)
+|||++.. ++|||++|.+. .+.+++.+ .++++||||||+ +|+++|.++|.+++++++|+++++|++|+++|+.++|
T Consensus 570 a~Sr~~~~~k~yVq~~l~~~l~~~l~~~l~~~~~~vYvCGp~-~M~~~V~~~L~~i~~~~gg~~~~~a~~~l~~l~~~~r 648 (688)
T 1tll_A 570 AYSREPDRPKKYVQDVLQEQLAESVYRALKEQGGHIYVCGDV-TMAADVLKAIQRIMTQQGKLSEEDAGVFISRLRDDNR 648 (688)
T ss_dssp EESSCTTSCCCCHHHHHHHSSHHHHHHHHHTSCCEEEEEEEH-HHHHHHHHHHHHHHHTTTCCCTTHHHHHHHHHHHTTC
T ss_pred EECCCCCCCccchhhhhHHhHHHHHHHhhccCCcEEEEeCCH-HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhhhhcCC
Confidence 99998764 89999999988 78888877 458999999998 9999999999999999999999999999999999999
Q ss_pred EEEeecC
Q 019521 334 YHVEAWS 340 (340)
Q Consensus 334 ~~~d~w~ 340 (340)
|+.|+|+
T Consensus 649 y~~Evf~ 655 (688)
T 1tll_A 649 YHEDIFG 655 (688)
T ss_dssp EEEEEEE
T ss_pred EEEEecC
Confidence 9999995
No 9
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=100.00 E-value=5.7e-40 Score=309.18 Aligned_cols=225 Identities=26% Similarity=0.415 Sum_probs=194.5
Q ss_pred CCCHHHHHHhcCCC-------CcceeecCCCCCC---CCCeEEEEEEEEEecCCCCCccCCCCccccccCCCCCCcEEEE
Q 019521 102 QMPIDWLVQLVPPL-------KTRAFSISSSPLA---HPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPA 171 (340)
Q Consensus 102 ~~p~~~l~~~lp~~-------~pR~YSIaS~p~~---~~~~v~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~v 171 (340)
..||||+...+|.. .+|+|||+|+|.. +++.++|+|+++.|.+..++.+.|.||+||+++++ |+.|.+
T Consensus 66 ~~pGQ~v~l~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~Vk~~~~~~~~~~~~~G~~S~~L~~l~~--Gd~v~v 143 (310)
T 3vo2_A 66 YREGQSIGIIADGEDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDQGEIVKGVCSNFLCDLKP--GADVKI 143 (310)
T ss_dssp CCTTCEEEEECSSBCTTSCBCCCEEEECCSCTTTTTTSSSEEEEEEECCEEECTTSCEEECHHHHHHHTCCT--TCEEEE
T ss_pred ccCCCEEEEECCCcCCCCCcCcceeeecCCCCcccCCCCCEEEEEEEEEEeccCCCCcCCcchhhHHhcCCC--CCEEEE
Confidence 47899988877753 5899999999853 36899999999988876666778999999999999 999999
Q ss_pred EeecCCCC-CC-CCCCCeEEEeCCcchhhHHHHHHHHHHhcCCC--CCCCEEEEEeccCCchhhhHHHHHHhHhcCC-Cc
Q 019521 172 WFQKGSLP-RP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSG--PAAPIIFFFGCRNEDDFLYRELWLSHSLNDG-VF 246 (340)
Q Consensus 172 ~~~~g~F~-l~-~~~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~--~~~~~~L~~G~R~~~d~ly~~eL~~~~~~~g-~l 246 (340)
.+|.|.|. +| +..+|+||||+|||||||++|++++....... ..++++||||||+.+|++|.+||+++.+.++ ++
T Consensus 144 ~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~L~~g~r~~~d~~~~~el~~l~~~~~~~~ 223 (310)
T 3vo2_A 144 TGPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFLEEHEDYKFSGLAWLFLGVPTSDSLLYKEELEKMKEMAPDNF 223 (310)
T ss_dssp EEEECSTTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHSSCCTTCCCCSEEEEEEEESSGGGCCSHHHHHHHHHHCTTTE
T ss_pred EeccCCcccCCCCCCCCEEEEeCCcchhHHHHHHHHHHHhhcccccCCCcEEEEEEecChhhcccHHHHHHHHHhCCCCE
Confidence 99999765 45 56789999999999999999999988654221 1368999999999999999999999988743 78
Q ss_pred cccCCCcEEEEEecCCC----CccchhhhHHHhHHHHHHhhc-CCCEEEEeCCCCccHHHHHHHHHHHHHHhCCCCHHHH
Q 019521 247 SEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSA 321 (340)
Q Consensus 247 ~~~~~~~~~~a~Sr~~~----~~~yVqd~l~~~~~~l~~~l~-~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~a 321 (340)
++++++||++. .++|||+.+.+..+.+++.+. +++.||+|||+ .|+++|+++|.+++.+.+ . ++
T Consensus 224 ------~v~~~~sr~~~~~~g~~~~v~~~l~~~~~~l~~~l~~~~~~vyvCGp~-~M~~~v~~~L~~~~~~~g-~---~~ 292 (310)
T 3vo2_A 224 ------RLDFAVSREQTNAAGEKMYIQTRMAEYREELWELLKKDNTYVYMCGLK-GMEKGIDDIMLNLAAKDG-I---DW 292 (310)
T ss_dssp ------EEEEEETTTCBCTTCCBCCHHHHHHTTHHHHHHHHTSTTEEEEEEEST-THHHHHHHHHHHHHHHTT-C---CH
T ss_pred ------EEEEEECCCCCCCCCcceehHHHHHHHHHHHHHhcccCCcEEEEeCCH-HHHHHHHHHHHHHHHHcC-c---CH
Confidence 89999999864 478999999998888888775 48999999998 999999999999998764 3 58
Q ss_pred HHHHHHHHHCCCEEEeec
Q 019521 322 ANWLKALQRAGRYHVEAW 339 (340)
Q Consensus 322 ~~~~~~l~~~~R~~~d~w 339 (340)
++|+++|+++|||++|+|
T Consensus 293 ~~~~~~l~~~~r~~~e~y 310 (310)
T 3vo2_A 293 MQYKKQLKKGEQWNVEVY 310 (310)
T ss_dssp HHHHHHHHHTTSEEEEEC
T ss_pred HHHHHHHHHCCceEEecC
Confidence 889999999999999999
No 10
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A*
Probab=100.00 E-value=3.4e-39 Score=304.20 Aligned_cols=225 Identities=25% Similarity=0.414 Sum_probs=190.5
Q ss_pred CCCHHHHHHhcCC-------CCcceeecCCCCCC---CCCeEEEEEEEEEecCCCCCccCCCCccccccCCCCCCcEEEE
Q 019521 102 QMPIDWLVQLVPP-------LKTRAFSISSSPLA---HPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPA 171 (340)
Q Consensus 102 ~~p~~~l~~~lp~-------~~pR~YSIaS~p~~---~~~~v~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~v 171 (340)
..||||+...+|. ..+|+|||+|+|.. .++.++|+|+.+.|.+..++.+.|.+|+||.++++ |+.|.+
T Consensus 70 ~~pGQ~v~l~~~~~~~~g~~~~~R~ySi~s~p~~~~~~~~~~~l~Vk~~~y~~~~g~~~~G~~S~~L~~l~~--Gd~v~v 147 (314)
T 1fnb_A 70 YREGQSVGVIPDGEDKNGKPHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKP--GAEVKL 147 (314)
T ss_dssp CCTTCEEEEECSSBCTTSSBCCCEEEECCSCSSCTTSSSCEEEEEEECCEEECTTSCEEECHHHHHHHHCCT--TCEEEE
T ss_pred cCCCCEEEEecCCCCcCCCcCCceeEecCCCCcccCCCCCEEEEEEEEEEeccCCCCcCCCchhhHhhcCCC--CCEEEE
Confidence 3789998777664 36899999999853 25899999998888776566678999999999999 999999
Q ss_pred EeecCCCC-CC-CCCCCeEEEeCCcchhhHHHHHHHHHHhcCCC--CCCCEEEEEeccCCchhhhHHHHHHhHhcCC-Cc
Q 019521 172 WFQKGSLP-RP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSG--PAAPIIFFFGCRNEDDFLYRELWLSHSLNDG-VF 246 (340)
Q Consensus 172 ~~~~g~F~-l~-~~~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~--~~~~~~L~~G~R~~~d~ly~~eL~~~~~~~g-~l 246 (340)
.+|.|.|. ++ +..+|+||||+|||||||++|++++....... ..++++||||||+.+|++|.+||+++.+.++ ++
T Consensus 148 ~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~L~~g~R~~~d~~~~~el~~l~~~~~~~~ 227 (314)
T 1fnb_A 148 TGPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPDNF 227 (314)
T ss_dssp EEEECSTTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHTCCBTTBCCCSEEEEEEEESSGGGCCSHHHHHHHHHHCTTTE
T ss_pred EeccCCceeCCCCCCCCEEEEeCCccHHHHHHHHHHHHHhccccccCCCCEEEEEecCCHHHhhhHHHHHHHHHhCCCcE
Confidence 99999865 55 45789999999999999999999988653211 1267999999999999999999999987634 68
Q ss_pred cccCCCcEEEEEecCCC----CccchhhhHHHhHHHHHHhhc-CCCEEEEeCCCCccHHHHHHHHHHHHHHhCCCCHHHH
Q 019521 247 SEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSA 321 (340)
Q Consensus 247 ~~~~~~~~~~a~Sr~~~----~~~yVqd~l~~~~~~l~~~l~-~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~a 321 (340)
++++++||+++ .++||++.+.+..+.+++.+. +++.||+|||+ +|+++|.+.|.+++.+.+ . ++
T Consensus 228 ------~~~~~~s~~~~~~~g~~~~v~~~l~~~~~~~~~~~~~~~~~vyvCGp~-~m~~~v~~~L~~~~~~~g-~---~~ 296 (314)
T 1fnb_A 228 ------RLDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLKKDNTYVYMCGLK-GMEKGIDDIMVSLAAAEG-I---DW 296 (314)
T ss_dssp ------EEEEEETTTCBCTTCCBCCHHHHHHTTHHHHHHHTTSTTEEEEEEECT-THHHHHHHHHHHHHHTTT-C---CH
T ss_pred ------EEEEEECCCCcccCCCceechHHHHHhHHHHHHHHhcCCeEEEEECCH-HHHHHHHHHHHHHHHHhC-c---hH
Confidence 89999999753 478999999988777777664 58899999998 999999999999988764 3 47
Q ss_pred HHHHHHHHHCCCEEEeec
Q 019521 322 ANWLKALQRAGRYHVEAW 339 (340)
Q Consensus 322 ~~~~~~l~~~~R~~~d~w 339 (340)
++++++|+++|||++|+|
T Consensus 297 ~~~~~~l~~~~r~~~d~~ 314 (314)
T 1fnb_A 297 IEYKRQLKKAEQWNVEVY 314 (314)
T ss_dssp HHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHCCcEEEecC
Confidence 889999999999999999
No 11
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=100.00 E-value=1.5e-38 Score=299.32 Aligned_cols=225 Identities=28% Similarity=0.424 Sum_probs=188.7
Q ss_pred CCCHHHHHHhcCCC---------CcceeecCCCCCC---CCCeEEEEEEEEEecCCCCC----ccCCCCccccccCCCCC
Q 019521 102 QMPIDWLVQLVPPL---------KTRAFSISSSPLA---HPNQVHLTVSVVSWTTPYKR----KRTGLCSVWLAGLDPQQ 165 (340)
Q Consensus 102 ~~p~~~l~~~lp~~---------~pR~YSIaS~p~~---~~~~v~l~V~~v~~~~~~~~----~~~G~~S~~L~~l~~~~ 165 (340)
..||||+...+|.. .+|+|||+|+|.. +++.++|+|+++.|.++... .+.|.+|+||.++++
T Consensus 61 ~~pGQ~v~l~~~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~Vk~~~~~~~~~~~~~~~~~G~~S~~L~~l~~-- 138 (311)
T 3lo8_A 61 YWEGQSYGVIPPGENPKKPGAPQNVRLYSIASTRYGDNFDGRTGSLCVRRAVYYDPETGKEDPSKNGVCSNFLCNSKP-- 138 (311)
T ss_dssp CCTTCEEEEECSSBCTTSTTCBCCCEEEEBCSCTTTTTTSSSEEEEEEECCCCCCTTTCCCCGGGSCHHHHHHHTCCT--
T ss_pred ccCCCEEEEeCCCCccccCCCCCCceeeEecCCCcccCCCCCEEEEEEEEEEecccccCcCCcCCCCchhhHHhcCCC--
Confidence 47999988888763 6899999999964 25799999987655433221 367999999999999
Q ss_pred CcEEEEEeecCCCCC-C--CCCCCeEEEeCCcchhhHHHHHHHHHHhcCCC--CCCCEEEEEeccCCchhhhHHHHHHhH
Q 019521 166 GIYIPAWFQKGSLPR-P--PPSVPLILIGPGTGCAPFRGFVEERAIQSSSG--PAAPIIFFFGCRNEDDFLYRELWLSHS 240 (340)
Q Consensus 166 G~~v~v~~~~g~F~l-~--~~~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~--~~~~~~L~~G~R~~~d~ly~~eL~~~~ 240 (340)
|+.|.+.+|.|.|.+ + +..+|+||||+|||||||++|++++......+ ..++++||||||+.+|++|.+||+++.
T Consensus 139 Gd~v~v~gP~G~~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~l~~g~r~~~d~~~~~el~~l~ 218 (311)
T 3lo8_A 139 GDKIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFMEDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSYL 218 (311)
T ss_dssp TCEEEEEEEECCTTCCCCSCTTCEEEEEEEGGGGHHHHHHHHHHHTEECTTCCCCSEEEEEEEESSGGGCSSHHHHHHHH
T ss_pred cCEEEEEeccCCcccCCCcCCCCCEEEEECCEEHHHHHHHHHHHHHhccccccCCCCEEEEEecCChHHhhHHHHHHHHH
Confidence 999999999998765 4 36789999999999999999999988764321 126799999999999999999999998
Q ss_pred hcCC-CccccCCCcEEEEEecCCC----CccchhhhHHHhHHHHHHhhcCCCEEEEeCCCCccHHHHHHHHHHHHHHhCC
Q 019521 241 LNDG-VFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGE 315 (340)
Q Consensus 241 ~~~g-~l~~~~~~~~~~a~Sr~~~----~~~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~ 315 (340)
+.++ ++ ++++++||++. .++||++.+.+..+.+++++.+++.||+|||+ +|+++|+++|.+++.+.+
T Consensus 219 ~~~~~~~------~~~~~~s~~~~~~~g~~~~v~~~l~~~~~~~~~~~~~~~~vyvCGp~-~m~~~v~~~L~~~~~~~g- 290 (311)
T 3lo8_A 219 KQYPDNF------RYDKALSREQKNRSGGKMYVQDKIEEYSDEIFKLLDGGAHIYFCGLK-GMMPGIQDTLKKVAERRG- 290 (311)
T ss_dssp HHCTTTE------EEEEEETTTC-------CCHHHHHHHTHHHHHHHHHTTCEEEEEECG-GGHHHHHHHHHHHHHHTT-
T ss_pred HhCCCcE------EEEEEECCCCcccCCCcceehHHHHHHHHHHHHhhcCCcEEEEECCH-HHHHHHHHHHHHHHHhcc-
Confidence 7643 78 89999999864 47899999999888888777678999999998 999999999999998764
Q ss_pred CCHHHHHHHHHHHHHCCCEEEeec
Q 019521 316 ASRDSAANWLKALQRAGRYHVEAW 339 (340)
Q Consensus 316 ~~~~~a~~~~~~l~~~~R~~~d~w 339 (340)
+++++|+++|+++|||++|+|
T Consensus 291 ---~~~~~~~~~l~~~~ry~~e~y 311 (311)
T 3lo8_A 291 ---ESWDQKLAQLKKNKQWHVEVY 311 (311)
T ss_dssp ---CCHHHHHHHHHHTTCEEEEEC
T ss_pred ---HHHHHHHHHHHHCCcEEEecC
Confidence 357899999999999999999
No 12
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ...
Probab=100.00 E-value=3e-38 Score=296.25 Aligned_cols=225 Identities=24% Similarity=0.414 Sum_probs=187.1
Q ss_pred CCCHHHHHHhcCC-------CCcceeecCCCCCC---CCCeEEEEEEEEEecCCC-CCccCCCCccccccCCCCCCcEEE
Q 019521 102 QMPIDWLVQLVPP-------LKTRAFSISSSPLA---HPNQVHLTVSVVSWTTPY-KRKRTGLCSVWLAGLDPQQGIYIP 170 (340)
Q Consensus 102 ~~p~~~l~~~lp~-------~~pR~YSIaS~p~~---~~~~v~l~V~~v~~~~~~-~~~~~G~~S~~L~~l~~~~G~~v~ 170 (340)
..||||+...+|. ..+|+|||+|+|.. +++.++|+|+.+.|.++. +..+.|.+|+||.++++ |+.|.
T Consensus 55 ~~pGQ~v~l~~~~~~~~g~~~~~R~ySias~~~~~~~~~~~l~l~Vk~~~y~~~~~~~~~~G~~S~~L~~l~~--Gd~v~ 132 (304)
T 2bmw_A 55 YIEGQSIGIIPPGVDKNGKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEP--GSEVK 132 (304)
T ss_dssp CCTTCEEEEECSSBCTTSCBCCCEEEEBCSCTTTTTTSSSEEEEEEECCEECSSSSSSCEECHHHHHHHTCCT--TCEEE
T ss_pred cCCCCEEEEEcCCCcccCCCCCCcceecCCCCcccCCCCCEEEEEEEEEEeeccccCcCCCcchhhHHhcCCC--CCEEE
Confidence 4689998777664 35899999999852 358999999988776533 33457999999999999 99999
Q ss_pred EEeecCCCC-CC-CCCCCeEEEeCCcchhhHHHHHHHHHHhcC----CC--CCCCEEEEEeccCCchhhhHHHHHHhHhc
Q 019521 171 AWFQKGSLP-RP-PPSVPLILIGPGTGCAPFRGFVEERAIQSS----SG--PAAPIIFFFGCRNEDDFLYRELWLSHSLN 242 (340)
Q Consensus 171 v~~~~g~F~-l~-~~~~pii~Ia~GtGIAPf~s~l~~~~~~~~----~~--~~~~~~L~~G~R~~~d~ly~~eL~~~~~~ 242 (340)
+.+|.|.|. ++ +..+|+||||+|||||||++|++++..... .. ..++++||||||+.+|++|.+||+++.+.
T Consensus 133 v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~~~~~v~l~~g~r~~~d~~~~~el~~~~~~ 212 (304)
T 2bmw_A 133 ITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQK 212 (304)
T ss_dssp EEEEECSSSCCCSCTTCEEEEEEEGGGHHHHHHHHHHHHCHHHHHHCTTCCCCSCEEEEEEESSGGGCTTHHHHHHHHHH
T ss_pred EEeccCCceeCCCCCCCCEEEEecCccHHHHHHHHHHHHHhhhhhcccccccCCCEEEEEEeCChHhcchHHHHHHHHHh
Confidence 999999764 56 567899999999999999999998875431 00 12689999999998899999999999876
Q ss_pred CC-CccccCCCcEEEEEecCCC----CccchhhhHHHhHHHHHHhhcC-CCEEEEeCCCCccHHHHHHHHHHHHHHhCCC
Q 019521 243 DG-VFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEA 316 (340)
Q Consensus 243 ~g-~l~~~~~~~~~~a~Sr~~~----~~~yVqd~l~~~~~~l~~~l~~-~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~ 316 (340)
++ ++ ++++++||++. .+.|||+.+.+..+.+++++.+ ++.||+|||+ +|+++|+++|.+++.+. |.
T Consensus 213 ~~~~~------~~~~~~s~~~~~~~~~~~~v~~~l~~~~~~l~~~~~~~~~~vyvCGp~-~m~~~v~~~l~~~~~~~-g~ 284 (304)
T 2bmw_A 213 YPDNF------RLTYAISREQKNPQGGRMYIQDRVAEHADQLWQLIKNQKTHTYICGPP-PMEEGIDAALSAAAAKE-GV 284 (304)
T ss_dssp CTTTE------EEEEEETTTCBCTTSSBCCHHHHHHHTHHHHHHHHTSTTEEEEEEECT-THHHHHHHHHHHHHHTT-TC
T ss_pred CCCcE------EEEEEEcCCCCCCCCCcceehHHHHHhHHHHHHHhhcCCcEEEEECCH-HHHHHHHHHHHHHHHHc-Cc
Confidence 43 68 89999999753 4789999999888888776654 7899999998 99999999999998865 45
Q ss_pred CHHHHHHHHHHHHHCCCEEEeec
Q 019521 317 SRDSAANWLKALQRAGRYHVEAW 339 (340)
Q Consensus 317 ~~~~a~~~~~~l~~~~R~~~d~w 339 (340)
+ +++++++|+++|||++|+|
T Consensus 285 ~---~~~~~~~m~~~~ry~~e~~ 304 (304)
T 2bmw_A 285 T---WSDYQKDLKKAGRWHVETY 304 (304)
T ss_dssp C---HHHHHHHHHHTTCEEEEEC
T ss_pred c---HHHHHHHHHHcCCeEEecC
Confidence 4 6779999999999999999
No 13
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP}
Probab=100.00 E-value=6.7e-38 Score=305.18 Aligned_cols=225 Identities=23% Similarity=0.374 Sum_probs=190.2
Q ss_pred CCCHHHHHHhcCC-------CCcceeecCCCCCC---CCCeEEEEEEEEEecCCC-CCccCCCCccccccCCCCCC-cEE
Q 019521 102 QMPIDWLVQLVPP-------LKTRAFSISSSPLA---HPNQVHLTVSVVSWTTPY-KRKRTGLCSVWLAGLDPQQG-IYI 169 (340)
Q Consensus 102 ~~p~~~l~~~lp~-------~~pR~YSIaS~p~~---~~~~v~l~V~~v~~~~~~-~~~~~G~~S~~L~~l~~~~G-~~v 169 (340)
..||||+...+|. ..+|+|||+|+|.. +++.++|+|+++.|.++. ++.+.|.||+||+++++ | +.|
T Consensus 156 ~~pGQ~v~l~~~~~~~~g~~~~~R~ySIas~p~~~~~~~~~l~l~Vk~~~y~~~~~~~~~~G~~S~~L~~l~~--G~d~v 233 (402)
T 2b5o_A 156 YLEGQSIGIIPPGEDKNGKPHKLRLYSIASTRHGDMEDNKTVSLCVRQLEYQDPESGETVYGVCSTYLCNLPV--GTDDV 233 (402)
T ss_dssp CCTTCEEEEECSSEETTTEECCCEEEEBCSCTTTTTTSSCEEEEEEECCEEECTTTCCEEECHHHHHHHTCCT--TCCCE
T ss_pred cCCCCEEEEEecCCCcCCCccCceeeeccCCCccccCCCCEEEEEEEEeeecccccCcCCCCchhHHHhhCCC--CCceE
Confidence 4789998877764 46899999999853 258999999988776532 33468999999999999 9 999
Q ss_pred EEEeecCCC-CCC-CCCCCeEEEeCCcchhhHHHHHHHHHHhcCCC--CCCCEEEEEeccCCchhhhHHHHHHhHhcCC-
Q 019521 170 PAWFQKGSL-PRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSG--PAAPIIFFFGCRNEDDFLYRELWLSHSLNDG- 244 (340)
Q Consensus 170 ~v~~~~g~F-~l~-~~~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~--~~~~~~L~~G~R~~~d~ly~~eL~~~~~~~g- 244 (340)
.+.+|.|.| .++ +..+|+||||+|||||||++|++++....... ..++++||||||+.+|++|.+||+++.+.++
T Consensus 234 ~v~gP~G~~~~l~~~~~~~vvlIAgGtGIaP~~s~l~~l~~~~~~~~~~~~~v~L~~g~R~~~d~~~~~eL~~l~~~~~~ 313 (402)
T 2b5o_A 234 KITGPVGKEMLLPDDEDATVVMLATGTGIAPFRAFLWRMFKEQHEDYKFKGKAWLIFGVPYTANILYKDDFEKMAAENPD 313 (402)
T ss_dssp EEEEEECSTTCCCSCTTCEEEEEEEGGGGHHHHHHHHHHHTCCCSSCCCCSEEEEEEEESSGGGCTTHHHHHHHHHHCTT
T ss_pred EEEcccCCcccCCccCCCCEEEEEcccCHHHHHHHHHHHHHhccccccccCCEEEEEecCCHHHhHHHHHHHHHHHhCCC
Confidence 999999976 456 56789999999999999999999987654211 1268999999999999999999999987644
Q ss_pred CccccCCCcEEEEEecCCC----CccchhhhHHHhHHHHHHhhc-CCCEEEEeCCCCccHHHHHHHHHHHHHHhCCCCHH
Q 019521 245 VFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRD 319 (340)
Q Consensus 245 ~l~~~~~~~~~~a~Sr~~~----~~~yVqd~l~~~~~~l~~~l~-~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~ 319 (340)
++ ++++++||+++ .++||++.+.+..+.+++++. .++.||+|||+ +|+++|.++|.+++.+.+.
T Consensus 314 ~~------~v~~~~S~~~~~~~g~~~~v~~~l~~~~~~l~~~l~~~~~~vyvCGP~-~M~~~v~~~L~~~g~~~g~---- 382 (402)
T 2b5o_A 314 NF------RLTYAISREQKTADGGKVYVQSRVSEYADELFEMIQKPNTHVYMCGLK-GMQPPIDETFTAEAEKRGL---- 382 (402)
T ss_dssp TE------EEEEEETTTCBCTTSCBCCHHHHHHHTHHHHHHHHTSTTEEEEEEECG-GGHHHHHHHHHHHHHHTTC----
T ss_pred cE------EEEEEECCCCcccCCCccchHHHHHHhHHHHHHHhccCCcEEEEECCH-HHHHHHHHHHHHHHHHcCc----
Confidence 68 89999999753 478999999998888888774 48899999998 9999999999999988753
Q ss_pred HHHHHHHHHHHCCCEEEeec
Q 019521 320 SAANWLKALQRAGRYHVEAW 339 (340)
Q Consensus 320 ~a~~~~~~l~~~~R~~~d~w 339 (340)
.+++++++|+++|||++|+|
T Consensus 383 ~~~~~~~~m~~~~Ry~~e~~ 402 (402)
T 2b5o_A 383 NWEEMRRSMKKEHRWHVEVY 402 (402)
T ss_dssp CHHHHHHHHHHTTCEEEEEC
T ss_pred hHHHHHHHHHHCCCEEEecC
Confidence 47889999999999999999
No 14
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A*
Probab=100.00 E-value=1.2e-36 Score=286.61 Aligned_cols=224 Identities=20% Similarity=0.304 Sum_probs=181.5
Q ss_pred CCCHHHHHHhcCC--------------CCcceeecCCCCCC---CCCeEEEEEEEEEecCCCCCc-cCCCCccccccCCC
Q 019521 102 QMPIDWLVQLVPP--------------LKTRAFSISSSPLA---HPNQVHLTVSVVSWTTPYKRK-RTGLCSVWLAGLDP 163 (340)
Q Consensus 102 ~~p~~~l~~~lp~--------------~~pR~YSIaS~p~~---~~~~v~l~V~~v~~~~~~~~~-~~G~~S~~L~~l~~ 163 (340)
..|||++...+|. +.+|+|||+|+|.. +++.++|+|+++.|.++.++. +.|.+|+||.++++
T Consensus 64 ~~pGQ~v~l~~~~~~~~g~~~~~~~~~~~~R~ySi~s~p~~~~~~~~~l~l~vk~~~~~~~~g~~~~~G~~S~~L~~l~~ 143 (314)
T 2rc5_A 64 YVIGQSGGVIPPGEDPEKKAKGLADVGYTVRLYSIASPSYSFGMKEDNIEFIIKRDNIYDENGNIQFKGVCSNYMCDLKP 143 (314)
T ss_dssp CCTTCEEEEECSSBCHHHHHTTCSCCBCCCEEEECCSCTTCGGGCCCEEEEEEECCBCC--CCSCSSBCHHHHHHHTCCT
T ss_pred ccCCCEEEEECCCCccccCccchhhcCCCceeeeccCCccccCCCCCEEEEEEEEEeecCCCCCcCCCcchHHHHhcCCC
Confidence 3689987776664 46799999999852 368999999987766544433 57999999999999
Q ss_pred CCCcEEEEEeecCCCCC-CC--CCCCeEEEeCCcchhhHHHHHHHHHHhcCCCCCCCEEEEEeccCCchhhhHHHHHHhH
Q 019521 164 QQGIYIPAWFQKGSLPR-PP--PSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHS 240 (340)
Q Consensus 164 ~~G~~v~v~~~~g~F~l-~~--~~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~eL~~~~ 240 (340)
|+.|.+.+|.|.|.+ +. ..+|+||||+|||||||++|++++.........++++||||+|+.+|++|.+||+++.
T Consensus 144 --Gd~v~v~gP~G~~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~l~~~~~~~~~~~v~l~~g~r~~~d~~~~~el~~l~ 221 (314)
T 2rc5_A 144 --GDEVTMTGPSGKKFLLPNTDFSGDIMFLATGTGIAPFIGMSEELLEHKLIKFTGNITLVYGAPYSDELVMMDYLKGLE 221 (314)
T ss_dssp --TCEEEEEEEECSSSCCCSSCBCSCEEEEEEGGGGHHHHHHHHHHHTTCSSCBCSCEEEEEEESSGGGSCSHHHHHHHH
T ss_pred --cCEEEEEeccCCceeCCCCCCCCCEEEEECCccHHHHHHHHHHHHHhcccCCCCcEEEEEEeCCHHHHhHHHHHHHHH
Confidence 999999999998754 43 4789999999999999999999988653211126899999999999999999999998
Q ss_pred hcCCCccccCCCcEEEEEecCCC-----CccchhhhHHHhHHHHHHhhcCCCEEEEe-CCCCccHHHHHHHHHHHHHHhC
Q 019521 241 LNDGVFSEAKGGGFYVAFSRKQP-----QKVYVQHKMLEQSQRIWNLLLSKASIYVA-GSATKMPSDVWSTFEEIVSKEG 314 (340)
Q Consensus 241 ~~~g~l~~~~~~~~~~a~Sr~~~-----~~~yVqd~l~~~~~~l~~~l~~~~~iyvC-G~~~~M~~~v~~~L~~i~~~~~ 314 (340)
+.++++ ++++++||+.. .++||++.+.+..+.+++.+.+...+|+| ||+ +|+++|++.|.++.. .
T Consensus 222 ~~~~~~------~~~~~~s~~~~~~~~g~~~~v~~~l~~~~~~l~~~~~~~~~~yvCGGp~-~m~~~v~~~L~~~g~--~ 292 (314)
T 2rc5_A 222 SKHKNF------KLITAISREEKNSFDGGRMYISHRVREQAEAVKKILNGGGRFYICGGPK-GMEKGVIEEIQKISG--N 292 (314)
T ss_dssp HHHSSE------EEEEEETTTCBCTTTSSBCCHHHHHHHTHHHHHHHHHHTCEEEEEESST-TTHHHHHHHHHHHHT--C
T ss_pred HhCCcE------EEEEEECCCCCcccCCCceehhHHHHHhHHHHHHHhhcCCeEEEeCCcH-HHHHHHHHHHHHHHh--c
Confidence 754678 89999999743 36899999998777777666433445999 998 999999999999765 2
Q ss_pred CCCHHHHHHHHHHHHHCCCEEEeec
Q 019521 315 EASRDSAANWLKALQRAGRYHVEAW 339 (340)
Q Consensus 315 ~~~~~~a~~~~~~l~~~~R~~~d~w 339 (340)
+ ..++.|+.+|+++|||++|+|
T Consensus 293 ~---i~~e~f~~~l~~~gr~~~e~~ 314 (314)
T 2rc5_A 293 T---GTYEEFKHHLEGAHQLFVETY 314 (314)
T ss_dssp C---SCHHHHHHHHHHTTCEEEEEC
T ss_pred c---chHHHHHHHHHHCCCEEEecC
Confidence 3 346889999999999999999
No 15
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=100.00 E-value=4.4e-34 Score=269.83 Aligned_cols=200 Identities=22% Similarity=0.327 Sum_probs=161.6
Q ss_pred CCcceeecCCCCCCCCCeEEEEEEEEEecCC---CCCccCCCCccccccCCCCCCcEEEEEeecCCCCCC-C---CCCCe
Q 019521 115 LKTRAFSISSSPLAHPNQVHLTVSVVSWTTP---YKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGSLPRP-P---PSVPL 187 (340)
Q Consensus 115 ~~pR~YSIaS~p~~~~~~v~l~V~~v~~~~~---~~~~~~G~~S~~L~~l~~~~G~~v~v~~~~g~F~l~-~---~~~pi 187 (340)
..+|+|||+|+|.. +.++|+|+++.|.+. .++.+.|.||+||.++++ |+.|.+.+|.|.|.++ + ..+|+
T Consensus 98 ~~~R~ySIaS~p~~--~~l~l~Vk~~~y~~~~~~~~~~~~G~~S~~L~~l~~--Gd~v~v~gP~G~f~l~~~~~~~~~~v 173 (316)
T 3jqq_A 98 RCARLYSISSSNNM--ENLSVAIKIHKYEQTENAPNITNYGYCSGFIKNLKI--NDDIYLTGAHGYFNLPNDAIQKNTNF 173 (316)
T ss_dssp CCCEEEEBCSCTTS--SSEEEEEECCBC---------CCBCHHHHHHHTCCT--TCEEEEEEEECCCCCCTTHHHHTCCE
T ss_pred ccceeeecccCCCC--CeEEEEEEEEEecccccccCcCCCCchhHHHhhCCC--CCEEEEEecCCceEcCCcccCCCCcE
Confidence 47999999999964 789999998877642 234578999999999999 9999999999999998 4 37899
Q ss_pred EEEeCCcchhhHHHHHHHHHHhcCC-------CCCCCEEEEEeccCCchhhhHHHHHHhHhcCC-CccccCCCcEEEEEe
Q 019521 188 ILIGPGTGCAPFRGFVEERAIQSSS-------GPAAPIIFFFGCRNEDDFLYRELWLSHSLNDG-VFSEAKGGGFYVAFS 259 (340)
Q Consensus 188 i~Ia~GtGIAPf~s~l~~~~~~~~~-------~~~~~~~L~~G~R~~~d~ly~~eL~~~~~~~g-~l~~~~~~~~~~a~S 259 (340)
||||+|||||||+||++++...... ...++++||||||+.+|++|.+||+++.+.++ ++ ++++++|
T Consensus 174 vlIAgGtGIaP~~sil~~l~~~~~~~~~~~~~~~~~~v~L~~g~R~~~d~~~~~eL~~l~~~~~~~~------~~~~~~s 247 (316)
T 3jqq_A 174 IFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYITIYYGVYNEDSILYLNELEYFQKMYPNNI------NIHYVFS 247 (316)
T ss_dssp EEEEEGGGGHHHHHHHHHHTTCCGGGTTCCCCCCCCCEEEEEEESSGGGCTTHHHHHHHHHHCTTTE------EEEEEEG
T ss_pred EEEeCCceechHHHHHHHHHHhccccccccccCCCCcEEEEEEecCHHHhhcHHHHHHHHHhCCCcE------EEEEEEC
Confidence 9999999999999999999875310 02378999999999999999999999987644 78 8999999
Q ss_pred cCCC---CccchhhhHHHhHHHHHHhhc-CCCEEEEeCCCCccHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCEE
Q 019521 260 RKQP---QKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 335 (340)
Q Consensus 260 r~~~---~~~yVqd~l~~~~~~l~~~l~-~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~R~~ 335 (340)
|++. .++||++.+.+..+.+++++. +++.||+|||+ .|.+++++.|.+. ++++. ...+|++
T Consensus 248 ~~~~~~g~~g~V~~~l~~~~~~~~~~l~~~~~~vyvCGP~-~m~~~v~~~l~~~----G~~~~----------v~~~rih 312 (316)
T 3jqq_A 248 YKQNSDATSFYVQDEIYKRKTEFLNLFNNYKCELYICGKK-SIRYKVMDILKSH----DQFDE----------KKKKRVH 312 (316)
T ss_dssp GGCC---CBCCHHHHHHHTHHHHHHHHHHTCCEEEEEECS-THHHHHHHHHHC--------CH----------HHHTTEE
T ss_pred CCcccCCCccchhHHHHHhHHHHHHhhccCCeEEEEeCCH-HHHHHHHHHHHHc----CCCcc----------cccccEE
Confidence 9853 579999999998888888775 48999999998 9998887766553 33333 2357899
Q ss_pred Eeec
Q 019521 336 VEAW 339 (340)
Q Consensus 336 ~d~w 339 (340)
.|+|
T Consensus 313 ~E~f 316 (316)
T 3jqq_A 313 VEVY 316 (316)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9876
No 16
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=99.96 E-value=2.7e-29 Score=228.78 Aligned_cols=182 Identities=15% Similarity=0.168 Sum_probs=151.7
Q ss_pred CCCHHHHHHhcCC-CCcceeecCCCCCCCCCeEEEEEEEEEecCCCCCccCCCCccccc-cCCCCCCcEEEEEeecCCCC
Q 019521 102 QMPIDWLVQLVPP-LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLA-GLDPQQGIYIPAWFQKGSLP 179 (340)
Q Consensus 102 ~~p~~~l~~~lp~-~~pR~YSIaS~p~~~~~~v~l~V~~v~~~~~~~~~~~G~~S~~L~-~l~~~~G~~v~v~~~~g~F~ 179 (340)
..||||+...+|. ..+|+|||+|.|.. .+.++|+|+ +...|.+|+||. ++++ |+.|.+.+|.|.|.
T Consensus 44 ~~pGQ~v~l~~~~~~~~R~ySi~s~~~~-~~~l~i~vk---------~~~~G~~s~~l~~~l~~--Gd~v~v~gP~G~~~ 111 (250)
T 1tvc_A 44 FEPGQFMDLTIPGTDVSRSYSPANLPNP-EGRLEFLIR---------VLPEGRFSDYLRNDARV--GQVLSVKGPLGVFG 111 (250)
T ss_dssp CCSCCEEEECTTSCSSSEEECCBCCSSS-SCCEEEEEC---------CCTTSSSHHHHHHHSSS--SSEEEEEEEECCCS
T ss_pred cCCCcEEEEEeCCCccccccccCCCCCC-CCeEEEEEE---------ECCCCCchHHHHhcCCC--CCEEEEEcCccccc
Confidence 3689998888886 67899999999853 588999983 445799999995 8999 99999999999999
Q ss_pred CC-CCCCCeEEEeCCcchhhHHHHHHHHHHhcCCCCCCCEEEEEeccCCchhhhHHHHHHhHhcCCCccccCCCcEEEEE
Q 019521 180 RP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAF 258 (340)
Q Consensus 180 l~-~~~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~eL~~~~~~~g~l~~~~~~~~~~a~ 258 (340)
++ +..++++|||+||||||+++|++++...... .+++|+||+|+.+|++|.+||+++.+.++++ +++.++
T Consensus 112 ~~~~~~~~~vliagGtGiaP~~~~l~~l~~~~~~---~~v~l~~~~r~~~~~~~~~el~~l~~~~~~~------~~~~~~ 182 (250)
T 1tvc_A 112 LKERGMAPRYFVAGGTGLAPVVSMVRQMQEWTAP---NETRIYFGVNTEPELFYIDELKSLERSMRNL------TVKACV 182 (250)
T ss_dssp CCCCSSSCEEEEEESSTTHHHHHHHHHHHHHTCC---SCEEEEEECSSSTTCCCHHHHHHHHHHSSSC------EEEECC
T ss_pred cCccCCceEEEEEeccCHHHHHHHHHHHHhcCCC---ceEEEEEEeCCHHHhhhHHHHHHHHHhCCCe------EEEEEe
Confidence 87 5558999999999999999999999876543 7899999999999999999999998755778 899899
Q ss_pred ecCCC----CccchhhhHHHhHHHHHHhhcCCCEEEEeCCCCccHHHHHHHHHHH
Q 019521 259 SRKQP----QKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEI 309 (340)
Q Consensus 259 Sr~~~----~~~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i 309 (340)
|++++ .+++|++.+.+... +. ..+..+|+|||+ .|++++++.|.+.
T Consensus 183 s~~~~~~~g~~g~v~~~l~~~~~---~~-~~~~~vyvCGp~-~m~~~v~~~l~~~ 232 (250)
T 1tvc_A 183 WHPSGDWEGEQGSPIDALREDLE---SS-DANPDIYLCGPP-GMIDAACELVRSR 232 (250)
T ss_dssp SSCSSCCSSSSSSSSHHHHHHHH---HS-SSSSEEEEESSH-HHHHHHHHHHHHH
T ss_pred ccCCCCcCCccceehHHHHhhhh---cc-cCCcEEEEeCCH-HHHHHHHHHHHHc
Confidence 98532 46789887764321 11 247899999998 9999998887653
No 17
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=99.96 E-value=3.1e-29 Score=233.01 Aligned_cols=181 Identities=19% Similarity=0.334 Sum_probs=142.1
Q ss_pred CCcceeecCCCCCCCCCeEEEEEEEEEec--CC----CCCccCCCCccccccCCCCCCcEEEEEeecCCCCCCCCCCCeE
Q 019521 115 LKTRAFSISSSPLAHPNQVHLTVSVVSWT--TP----YKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGSLPRPPPSVPLI 188 (340)
Q Consensus 115 ~~pR~YSIaS~p~~~~~~v~l~V~~v~~~--~~----~~~~~~G~~S~~L~~l~~~~G~~v~v~~~~g~F~l~~~~~pii 188 (340)
..+|+|||+|+|.. .+.++|+|+++... +. .++...|.+|+||.++++ |+.|.+.+|.|.|.+++..+++|
T Consensus 84 ~~~R~ySi~s~~~~-~~~l~l~v~~~~~~~~~~~~~~~~~~~~G~~S~~l~~l~~--Gd~v~v~gP~G~f~~~~~~~~~v 160 (290)
T 2r6h_A 84 ETVRAYSMANYPAE-GNIITLNVRIATPPFDRAANKWKAGIKPGISSSYIFSLKP--GDKVMMSGPYGDFHIQDTDAEML 160 (290)
T ss_dssp CEEEEEECCSCTTC-CSEEEEEEECCCCCEETTTTEECTTCCCCHHHHHHTTCCT--TCEEEEEEEECCCCCCSSSCEEE
T ss_pred CcceeeeccCCCCC-CCEEEEEEEEeccccccccccccccCCCcchhhHHhcCCC--CCEEEEEecccCCcCCCCCCeEE
Confidence 46899999999853 57899999754211 00 012457999999999999 99999999999999876668999
Q ss_pred EEeCCcchhhHHHHHHHHHHhcCCCCCCCEEEEEeccCCchhhhHHHHHHhHhcCCCccccCCCcEEEEEecCCC-----
Q 019521 189 LIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----- 263 (340)
Q Consensus 189 ~Ia~GtGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~eL~~~~~~~g~l~~~~~~~~~~a~Sr~~~----- 263 (340)
|||+|||||||++|++++...... ..+++||||+|+.+|++|.+||+++.+.++++ +++.++||+..
T Consensus 161 liagGtGitP~~s~l~~~~~~~~~--~~~v~l~~~~r~~~d~~~~~el~~l~~~~~~~------~~~~~~s~~~~~~~~~ 232 (290)
T 2r6h_A 161 YIGGGAGMAPLRAQILHLFRTLKT--GRKVSYWYGARSKNEIFYEEDFREIEREFPNF------KFHIALSDPQPEDNWT 232 (290)
T ss_dssp EEEEGGGHHHHHHHHHHHHHTSCC--CSCEEEEEEESSGGGCCSHHHHHHHHHHCTTE------EEEEEESSCCGGGCCC
T ss_pred EEECccCHHHHHHHHHHHHHhcCC--CCcEEEEEEcCCHHHHHHHHHHHHHHHhCCCe------EEEEEEccCCcccCCC
Confidence 999999999999999988765321 27899999999999999999999998765778 89999998642
Q ss_pred -CccchhhhHHHhHHHHHHhh-cCCCEEEEeCCCCccHHHHHHHHHHH
Q 019521 264 -QKVYVQHKMLEQSQRIWNLL-LSKASIYVAGSATKMPSDVWSTFEEI 309 (340)
Q Consensus 264 -~~~yVqd~l~~~~~~l~~~l-~~~~~iyvCG~~~~M~~~v~~~L~~i 309 (340)
.+++|++.+.+. .+.+.. .+++.+|+|||+ +|+++|++.|.+.
T Consensus 233 g~~g~v~~~~~~~--~l~~~~~~~~~~vyvCGp~-~m~~~v~~~l~~~ 277 (290)
T 2r6h_A 233 GYVGFIHQVIYDN--YLKDHDAPEDIEYYMCGPG-PMANAVKGMLENL 277 (290)
T ss_dssp SCBSCHHHHHHHH--TTTTCSCGGGEEEEEECCH-HHHHHHHHHHHHH
T ss_pred CeeEecCHHHHHh--HHhhccCcCCcEEEEECCH-HHHHHHHHHHHHc
Confidence 367888776432 111111 126789999998 9999998888654
No 18
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=99.96 E-value=4.8e-29 Score=224.41 Aligned_cols=177 Identities=18% Similarity=0.203 Sum_probs=144.9
Q ss_pred CCCHHHHHHhcCCCCcceeecCCCCCCCCCeEEEEEEEEEecCCCCCccCCCCccc-cccCCCCCCcEEEEEeecCCCCC
Q 019521 102 QMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVW-LAGLDPQQGIYIPAWFQKGSLPR 180 (340)
Q Consensus 102 ~~p~~~l~~~lp~~~pR~YSIaS~p~~~~~~v~l~V~~v~~~~~~~~~~~G~~S~~-L~~l~~~~G~~v~v~~~~g~F~l 180 (340)
..||||+...+|...+|+|||+|+|.. ++.++|+|++ ...|.+|++ +.++++ |+.|.+.+|.|.|.+
T Consensus 30 ~~pGq~v~l~~~~~~~R~ySi~s~~~~-~~~l~l~i~~---------~~~G~~s~~~~~~l~~--Gd~v~v~gP~G~~~~ 97 (232)
T 1qfj_A 30 FRAGQYLMVVMDERDKRPFSMASTPDE-KGFIELHIGA---------SEINLYAKAVMDRILK--DHQIVVDIPHGEAWL 97 (232)
T ss_dssp CCTTCEEEEESSSSCEEEEECCSCTTS-TTCEEEEEC---------------CCHHHHHHHHH--HSEEEEEEEECSCCC
T ss_pred cCCCCEEEEECCCCceeeeecCCCCCC-CCcEEEEEEE---------ccCCchhHHHHHhCCC--CCEEEEeCCccceEe
Confidence 368999988888888999999999853 5789999854 345767775 568999 999999999999998
Q ss_pred C-CCCCCeEEEeCCcchhhHHHHHHHHHHhcCCCCCCCEEEEEeccCCchhhhHHHHHHhHhcCCCccccCCCcEEEEEe
Q 019521 181 P-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFS 259 (340)
Q Consensus 181 ~-~~~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~eL~~~~~~~g~l~~~~~~~~~~a~S 259 (340)
+ +..++++|||+||||||++++++++...... .+++|+||+|+.+|++|.+||+++.+.++++ +++.++|
T Consensus 98 ~~~~~~~~vliagG~GitP~~~~l~~l~~~~~~---~~v~l~~~~r~~~~~~~~~el~~l~~~~~~~------~~~~~~s 168 (232)
T 1qfj_A 98 RDDEERPMILIAGGTGFSYARSILLTALARNPN---RDITIYWGGREEQHLYDLCELEALSLKHPGL------QVVPVVE 168 (232)
T ss_dssp CSCSSSCEEEEEETTCHHHHHHHHHHHHHHCTT---CCEEEEEEESSGGGCTTHHHHHHHHHHCTTE------EEEEEES
T ss_pred CCCCCCcEEEEEecccHhHHHHHHHHHHhcCCC---CcEEEEEeeCCHHHhhhHHHHHHHHHHCCCe------EEEEEEc
Confidence 7 5578999999999999999999999886544 7899999999999999999999998765778 8999999
Q ss_pred cCCC----CccchhhhHHHhHHHHHHhhc-CCCEEEEeCCCCccHHHHHHHH
Q 019521 260 RKQP----QKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTF 306 (340)
Q Consensus 260 r~~~----~~~yVqd~l~~~~~~l~~~l~-~~~~iyvCG~~~~M~~~v~~~L 306 (340)
++++ .++++++.+.+. +.. .+..+|+|||+ +|++++++.|
T Consensus 169 ~~~~~~~g~~g~v~~~~~~~------~~~~~~~~vyvCGp~-~m~~~v~~~l 213 (232)
T 1qfj_A 169 QPEAGWRGRTGTVLTAVLQD------HGTLAEHDIYIAGRF-EMAKIARDLF 213 (232)
T ss_dssp SCCTTCCSEESCHHHHHHHH------CSCCTTCEEEEESCH-HHHHHHHHHH
T ss_pred CCCCCcCCceeeHHHHHHHh------cCCccccEEEEECCH-HHHHHHHHHH
Confidence 8654 357888776543 111 37899999998 9999988877
No 19
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=99.96 E-value=3.6e-29 Score=227.42 Aligned_cols=185 Identities=16% Similarity=0.168 Sum_probs=149.9
Q ss_pred CCCHHHHHHhcCC---CCcceeecCCCCCCCCCeEEEEEEEEEecCCCCCccCCCCccccccCCCCCCcEEEEE-eecCC
Q 019521 102 QMPIDWLVQLVPP---LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAW-FQKGS 177 (340)
Q Consensus 102 ~~p~~~l~~~lp~---~~pR~YSIaS~p~~~~~~v~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~v~-~~~g~ 177 (340)
..||||+...+|. ..+|+|||+|+|.. +.++|+|+. .+.|.+|+||.++++ |+.|.+. +|.|.
T Consensus 31 ~~pGq~v~l~~~~~g~~~~R~ySi~s~~~~--~~l~~~v~~---------~~~G~~s~~l~~l~~--Gd~v~v~~gP~G~ 97 (248)
T 1fdr_A 31 FTAGQFTKLGLEIDGERVQRAYSYVNSPDN--PDLEFYLVT---------VPDGKLSPRLAALKP--GDEVQVVSEAAGF 97 (248)
T ss_dssp CCTTCEEEEEECC---CEEEEEECCSCTTC--SSEEEEEEC---------CTTCSSHHHHHTCCT--TCEEEEESSCBCC
T ss_pred cCCCCcEEEEccCCCCeeeeeecccCCCCC--CcEEEEEEE---------eCCCchhhHHHhCCC--cCEEEEecCCcce
Confidence 3689998888873 46899999999853 789999853 357999999999999 9999999 99999
Q ss_pred CCCC-CC-CCCeEEEeCCcchhhHHHHHHHHHHhcCCCCCCCEEEEEeccCCchhhhHHHHHHhHhcC-CCccccCCCcE
Q 019521 178 LPRP-PP-SVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLND-GVFSEAKGGGF 254 (340)
Q Consensus 178 F~l~-~~-~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~eL~~~~~~~-g~l~~~~~~~~ 254 (340)
|.++ .. .++++|||+|||||||+++++++...... .+++|+||+|+.+|++|.+||+++.+.+ +++ ++
T Consensus 98 f~l~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~~---~~v~l~~~~r~~~~~~~~~el~~l~~~~~~~~------~~ 168 (248)
T 1fdr_A 98 FVLDEVPHCETLWMLATGTAIGPYLSILRLGKDLDRF---KNLVLVHAARYAADLSYLPLMQELEKRYEGKL------RI 168 (248)
T ss_dssp CSGGGSCCCSEEEEEEEGGGGHHHHHHHHHCCSCTTC---SEEEEEEEESSGGGCTTHHHHHHHHHHTTTSE------EE
T ss_pred eEcCCCCCCceEEEEEecccHHHHHHHHHHHHhhCCC---CcEEEEEEcCCHHHhhHHHHHHHHHHhCcCcE------EE
Confidence 9987 43 68999999999999999999987543322 7899999999999999999999998753 478 88
Q ss_pred EEEEecCCC---CccchhhhHHHhH-HHHHHh-h-cCCCEEEEeCCCCccHHHHHHHH-HHH
Q 019521 255 YVAFSRKQP---QKVYVQHKMLEQS-QRIWNL-L-LSKASIYVAGSATKMPSDVWSTF-EEI 309 (340)
Q Consensus 255 ~~a~Sr~~~---~~~yVqd~l~~~~-~~l~~~-l-~~~~~iyvCG~~~~M~~~v~~~L-~~i 309 (340)
+.++|+++. .+++|++.+.+.. +..... . .++..+|+|||+ +|++++++.| .+.
T Consensus 169 ~~~~s~~~~~~~~~g~v~~~l~~~~l~~~~~~~~~~~~~~vy~CGp~-~m~~~v~~~l~~~~ 229 (248)
T 1fdr_A 169 QTVVSRETAAGSLTGRIPALIESGELESTIGLPMNKETSHVMLCGNP-QMVRDTQQLLKETR 229 (248)
T ss_dssp EEEESSSCCTTEEESCHHHHHHTSHHHHHHTSCCCTTTEEEEEEECH-HHHHHHHHHHHHHH
T ss_pred EEEEecCCCCCCcceeeChHHHhhhHHHhhccCCCccCCEEEEeCCH-HHHHHHHHHHHHHc
Confidence 999998764 3688998876542 222221 2 237899999998 9999998888 554
No 20
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.96 E-value=7.8e-29 Score=235.60 Aligned_cols=178 Identities=21% Similarity=0.279 Sum_probs=150.9
Q ss_pred CCHHHHHHhcCC-CCcceeecCCCCCCCCCeEEEEEEEEEecCCCCCccCCCCccccc-cCCCCCCcEEEEEeecCCCCC
Q 019521 103 MPIDWLVQLVPP-LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLA-GLDPQQGIYIPAWFQKGSLPR 180 (340)
Q Consensus 103 ~p~~~l~~~lp~-~~pR~YSIaS~p~~~~~~v~l~V~~v~~~~~~~~~~~G~~S~~L~-~l~~~~G~~v~v~~~~g~F~l 180 (340)
.||||+...+|. ..+|+|||+|+|. .+.++|+|+ +...|.+|+||. ++++ |+.|.+.+|.|.|.+
T Consensus 140 ~pGQ~v~l~~~~~~~~R~ySi~s~~~--~~~l~~~vk---------~~~~G~~S~~L~~~l~~--Gd~v~v~gP~G~f~~ 206 (338)
T 1krh_A 140 LAGQYVNVTLPGTTETRSYSFSSQPG--NRLTGFVVR---------NVPQGKMSEYLSVQAKA--GDKMSFTGPFGSFYL 206 (338)
T ss_dssp CTTCEEEEECTTSSCEEEEECCSCTT--CSEEEEEEE---------CCTTCHHHHHHHTTCCT--TCEEEEEEEECSCSC
T ss_pred CCCCeEEEEcCCCCccccccccCCCC--CCeEEEEEE---------EcCCCCchhhHhhccCC--CCEEEEECCccceEe
Confidence 689998888887 5789999999985 589999985 345799999995 8999 999999999999998
Q ss_pred CCCCCCeEEEeCCcchhhHHHHHHHHHHhcCCCCCCCEEEEEeccCCchhhhHHHHHHhHhcCCCccccCCCcEEEEEec
Q 019521 181 PPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSR 260 (340)
Q Consensus 181 ~~~~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~eL~~~~~~~g~l~~~~~~~~~~a~Sr 260 (340)
+...++++|||+|||||||+++++++...... .+++|+||+|+.+|++|.+||+++.+.++++ +++.++|+
T Consensus 207 ~~~~~~~vliagGtGiaP~~s~l~~l~~~~~~---~~v~l~~~~r~~~d~~~~~el~~l~~~~~~~------~~~~~~s~ 277 (338)
T 1krh_A 207 RDVKRPVLMLAGGTGIAPFLSMLQVLEQKGSE---HPVRLVFGVTQDCDLVALEQLDALQQKLPWF------EYRTVVAH 277 (338)
T ss_dssp CCCSSCEEEEEEGGGHHHHHHHHHHHHHHCCS---SCEEEEEEESSGGGCCCHHHHHHHHHHCTTE------EEEEEETT
T ss_pred CCCCceEEEEEccccHhHHHHHHHHHHHcCCC---CeEEEEEEeCCHHHhhhHHHHHHHHHhCCCe------EEEEEEec
Confidence 74348999999999999999999999887544 7899999999999999999999998765778 89999998
Q ss_pred CCC---CccchhhhHHHhHHHHHHhhc-CCCEEEEeCCCCccHHHHHHHHHHH
Q 019521 261 KQP---QKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEI 309 (340)
Q Consensus 261 ~~~---~~~yVqd~l~~~~~~l~~~l~-~~~~iyvCG~~~~M~~~v~~~L~~i 309 (340)
++. .+++|++.+.+. .+. .+..+|+|||+ +|++++++.|.+.
T Consensus 278 ~~~~~~~~g~v~~~l~~~------~~~~~~~~vy~CGp~-~m~~~v~~~l~~~ 323 (338)
T 1krh_A 278 AESQHERKGYVTGHIEYD------WLNGGEVDVYLCGPV-PMVEAVRSWLDTQ 323 (338)
T ss_dssp CCSSSSEESCSGGGCCGG------GGGGGCSEEEEEEEH-HHHHHHHHHHHHH
T ss_pred CCCCCCccCccCHHHHHh------hcccCCcEEEEECCH-HHHHHHHHHHHHc
Confidence 754 367898877632 122 36789999998 9999998888653
No 21
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=99.95 E-value=7.6e-29 Score=224.64 Aligned_cols=184 Identities=18% Similarity=0.196 Sum_probs=147.2
Q ss_pred CCCHHHHHHhcC--C-CCcceeecCCCCCCCCCeEEEEEEEEEecCCCCCccCCCCccccccCCCCCCcEEEEEeecCCC
Q 019521 102 QMPIDWLVQLVP--P-LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGSL 178 (340)
Q Consensus 102 ~~p~~~l~~~lp--~-~~pR~YSIaS~p~~~~~~v~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~v~~~~g~F 178 (340)
..||||+...+| . ...|+|||+|.+. ..+.++|+|+ +...|.+|+||.++++ |+.|.+.+|.|.|
T Consensus 42 ~~pGq~v~l~~~~~g~~~~R~ysi~s~~~-~~~~~~l~vk---------~~~~G~~S~~l~~l~~--Gd~v~v~gP~G~f 109 (243)
T 2eix_A 42 LPIGQHMSVKATVDGKEIYRPYTPVSSDD-EKGYFDLIIK---------VYEKGQMSQYIDHLNP--GDFLQVRGPKGQF 109 (243)
T ss_dssp CCTTCEEEEEEEETTEEEEEEECCCSCTT-CCSEEEEEEE---------CCTTCHHHHHHHTCCT--TCEEEEEEEECSC
T ss_pred cCCceEEEEEEeeCCCEEEeeeeecCCCC-CCCEEEEEEE---------EcCCCCcchHhhcCCC--CCEEEEECCeEEE
Confidence 368999887776 2 3689999999985 3588999985 3357999999999999 9999999999999
Q ss_pred CCC-CCCCCeEEEeCCcchhhHHHHHHHHHHhcCCCCCCCEEEEEeccCCchhhhHHHHHHhHhcCCCccccCCCcEEEE
Q 019521 179 PRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVA 257 (340)
Q Consensus 179 ~l~-~~~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~eL~~~~~~~g~l~~~~~~~~~~a 257 (340)
.++ +..++++|||+|||||||+++++++...... ..+++|+||+|+.+|++|.+||+++.+.++++ +++.+
T Consensus 110 ~~~~~~~~~~vliagG~GiaP~~~~l~~l~~~~~~--~~~v~l~~~~r~~~~~~~~~el~~l~~~~~~~------~~~~~ 181 (243)
T 2eix_A 110 DYKPNMVKEMGMIAGGTGITPMLQVARAIIKNPKE--KTIINLIFANVNEDDILLRTELDDMAKKYSNF------KVYYV 181 (243)
T ss_dssp CCCTTSSSEEEEEEEGGGHHHHHHHHHHHHTCTTC--CCEEEEEEEEEEGGGCTTHHHHHHHHHHCTTE------EEEEE
T ss_pred EeCCCCCcEEEEEecCccHHHHHHHHHHHHhCCCC--CcEEEEEEEcCCHHHhhHHHHHHHHHHHCCCe------EEEEE
Confidence 988 5568999999999999999999998764211 27899999999999999999999998765678 89999
Q ss_pred EecCCC----CccchhhhHHHhHHHHHHhhcCCCEEEEeCCCCccHHHHHHHHHHH
Q 019521 258 FSRKQP----QKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEI 309 (340)
Q Consensus 258 ~Sr~~~----~~~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i 309 (340)
+|++.+ .+++|++.+.+. +......+..+|+|||+ +|++++++.|.+.
T Consensus 182 ~s~~~~~~~g~~g~v~~~~l~~---~~~~~~~~~~vy~CGp~-~m~~~v~~~l~~~ 233 (243)
T 2eix_A 182 LNNPPAGWTGGVGFVSADMIKQ---HFSPPSSDIKVMMCGPP-MMNKAMQGHLETL 233 (243)
T ss_dssp EEECCTTCCSEESSCCHHHHHH---HSCCTTSSEEEEEESSH-HHHHHHHHHHHHH
T ss_pred eCCCCccccCcCCccCHHHHHH---hcCCCCCCeEEEEECCH-HHHHHHHHHHHHc
Confidence 998543 357887643221 11111135689999998 9999998888654
No 22
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=99.95 E-value=1.2e-28 Score=223.19 Aligned_cols=181 Identities=17% Similarity=0.264 Sum_probs=146.3
Q ss_pred CCCHHHHHHhcCCC-----CcceeecCCCCCCCCCeEEEEEEEEEecCCCCCccCCCCccccc-cCCCCCCcEEEEEeec
Q 019521 102 QMPIDWLVQLVPPL-----KTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLA-GLDPQQGIYIPAWFQK 175 (340)
Q Consensus 102 ~~p~~~l~~~lp~~-----~pR~YSIaS~p~~~~~~v~l~V~~v~~~~~~~~~~~G~~S~~L~-~l~~~~G~~v~v~~~~ 175 (340)
..||||+...+|.- .+|+|||+|+|. .+.++|+|+.+.. .+...|.+|+||. .+++ |+.|.+.+|.
T Consensus 34 ~~pGq~v~l~~~~~~~~~~~~R~ySi~s~~~--~~~~~i~vk~~~~----~~~~~G~~S~~l~~~l~~--G~~v~v~gP~ 105 (243)
T 4eh1_A 34 YQPGQYIGIEVTPEGSDYREIRQYSLSHASN--GREYRISVKREGV----GSDNPGLVSHYLHNNVKV--GDSVKLYAPA 105 (243)
T ss_dssp CCTTCEEEEEECCSSCSSCEEEEEEBCSCCC--SSCEEEEEECTTT----TSSSCCHHHHHHHHHCCT--TCEEEEEEEE
T ss_pred cCCCCEEEEEEecCCCccccceeeEeccCCC--CCeEEEEEEEeec----CCCCCCeehhHHHhcCCC--CCEEEEEccC
Confidence 36899998888742 469999999985 3789999853211 1126799999997 6999 9999999999
Q ss_pred CCCCCCCCCCCeEEEeCCcchhhHHHHHHHHHHhcCCCCCCCEEEEEeccCCchhhhHHHHHHhHhcCCCccccCCCcEE
Q 019521 176 GSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFY 255 (340)
Q Consensus 176 g~F~l~~~~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~eL~~~~~~~g~l~~~~~~~~~ 255 (340)
|.|.+++..++++|||+|||||||++|++++...... . ++|+||+|+.+|++|.+||+++.+.+ ++ +++
T Consensus 106 G~~~~~~~~~~~vliagGtGitp~~~~l~~l~~~~~~---~-v~l~~~~r~~~~~~~~~el~~l~~~~-~~------~~~ 174 (243)
T 4eh1_A 106 GDFFYVERERPVVLISAGVGATPMQAILHTLAKQNKS---G-VTYLYACNSAKEHTFAQETAQLIAQQ-GW------MQQ 174 (243)
T ss_dssp CSCCCCCCSSCEEEEEEGGGHHHHHHHHHHHHHTTCC---S-EEEEEEESSGGGCTTHHHHHHHHHHH-TC------EEE
T ss_pred cccCcCCCCCCEEEEEccccHHHHHHHHHHHHHcCCC---e-EEEEEEeCChhhhhHHHHHHHHHHhC-Ce------EEE
Confidence 9999886678999999999999999999999886543 4 99999999999999999999998873 78 899
Q ss_pred EEEecCCC---CccchhhhHHHhHHHHHHhhcCCCEEEEeCCCCccHHHHHHHHHHH
Q 019521 256 VAFSRKQP---QKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEI 309 (340)
Q Consensus 256 ~a~Sr~~~---~~~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i 309 (340)
.++|++.. ..+++++.+. . +-..+..+|+|||+ .|++++++.|.+.
T Consensus 175 ~~~s~~~~~~~~~g~~~~~~~-~------~~~~~~~vyvCGp~-~m~~~v~~~l~~~ 223 (243)
T 4eh1_A 175 VWYRDESADDVLQGEMQLAEL-I------LPIEDGDFYLCGPI-GFMQYVVKQLLAL 223 (243)
T ss_dssp EEESSCCCTTCEESSCCCTTS-C------CCTTTCEEEEEECH-HHHHHHHHHHHHH
T ss_pred EEEccCCCcccccCCccHHHe-e------ccCCCcEEEEECCH-HHHHHHHHHHHHc
Confidence 99988655 2456655433 1 11247899999998 9999998888764
No 23
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=99.95 E-value=6.5e-29 Score=229.24 Aligned_cols=192 Identities=17% Similarity=0.156 Sum_probs=150.1
Q ss_pred CCHHHHHHhcC---CCCcceeecCCCCCCCCCeEEEEEEEEEecCCCCCccCCCCccccccCCCCCCcEEEEEeecCCCC
Q 019521 103 MPIDWLVQLVP---PLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGSLP 179 (340)
Q Consensus 103 ~p~~~l~~~lp---~~~pR~YSIaS~p~~~~~~v~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~v~~~~g~F~ 179 (340)
.||||+...+| ...+|+|||+|+|. +++.++|+|+++.+.+..+....|.+|+||.++++ |+.|.+.+|.|.|.
T Consensus 48 ~pGQ~v~l~~~~~g~~~~R~ySi~s~~~-~~~~~~l~vk~~~~~~~~~~~~~G~~S~~L~~l~~--Gd~v~v~gP~G~~~ 124 (275)
T 1umk_A 48 PVGQHIYLSARIDGNLVVRPYTPISSDD-DKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQI--GDTIEFRGPSGLLV 124 (275)
T ss_dssp CTTCEEEEEEEETTEEEEEEECCSSCTT-CCSEEEEEEECCCSSSBTTBTTCCHHHHHHHHCCT--TCEEEEEEEECSEE
T ss_pred CCCcEEEEEEeeCCcEEEeccccCCccC-CCCeEEEEEEEeccCcccccCCCChhHHHHhcCCC--CCEEEEEcCccceE
Confidence 68999877764 24789999999985 46899999987766554444467999999999999 99999999999875
Q ss_pred C--------C-C--------CCCCeEEEeCCcchhhHHHHHHHHHHhcCCCCCCCEEEEEeccCCchhhhHHHHHHhHhc
Q 019521 180 R--------P-P--------PSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLN 242 (340)
Q Consensus 180 l--------~-~--------~~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~eL~~~~~~ 242 (340)
+ + + ..++++|||+|||||||++|++++..... ...+++|+||+|+.+|++|.+||+++.+.
T Consensus 125 ~~~~~~f~l~~~~~~~~~~~~~~~~vliagGtGIaP~~~~l~~l~~~~~--~~~~v~l~~~~r~~~d~~~~~el~~l~~~ 202 (275)
T 1umk_A 125 YQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPD--DHTVCHLLFANQTEKDILLRPELEELRNK 202 (275)
T ss_dssp EEETTEEEECSSTTSCCEEEECSEEEEEEEGGGHHHHHHHHHHHHTCTT--CCCEEEEEEEESSGGGCTTHHHHHHHHHH
T ss_pred ecCCccccccccccccccccCCceEEEEecCccHhHHHHHHHHHHhCCC--CCcEEEEEEEcCCHHHhhHHHHHHHHHHh
Confidence 3 2 1 35799999999999999999999876421 12789999999999999999999999875
Q ss_pred CC-CccccCCCcEEEEEecCCC----CccchhhhHHHhHHHHHHhhcCCCEEEEeCCCCccHH-HHHHHHHHH
Q 019521 243 DG-VFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPS-DVWSTFEEI 309 (340)
Q Consensus 243 ~g-~l~~~~~~~~~~a~Sr~~~----~~~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~-~v~~~L~~i 309 (340)
++ ++ +++.++|+++. .+++|++.+.+. ......+++.+|+|||+ +|++ ++++.|.+.
T Consensus 203 ~~~~~------~~~~~~s~~~~~~~~~~g~v~~~~l~~---~l~~~~~~~~vyvCGp~-~m~~~~v~~~L~~~ 265 (275)
T 1umk_A 203 HSARF------KLWYTLDRAPEAWDYGQGFVNEEMIRD---HLPPPEEEPLVLMCGPP-PMIQYACLPNLDHV 265 (275)
T ss_dssp CTTTE------EEEEEESSCCSSCSSEESSCCHHHHHH---HSCCGGGCCEEEEESCH-HHHHHTTHHHHHHH
T ss_pred CcCcE------EEEEEEcCCCccccCccCccCHHHHHH---hcCCCCCCeEEEEECCH-HHHHHHHHHHHHHc
Confidence 44 57 88899998653 267888754322 11111237899999998 9998 888888754
No 24
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=99.95 E-value=3.7e-29 Score=230.53 Aligned_cols=201 Identities=18% Similarity=0.245 Sum_probs=154.9
Q ss_pred CCHHHHHHhcC---CCCcceeecCCCCCCCCCeEEEEEEEEEecCCCCCccCCCCccccccCCCCCCcEEEEE-eecCCC
Q 019521 103 MPIDWLVQLVP---PLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAW-FQKGSL 178 (340)
Q Consensus 103 ~p~~~l~~~lp---~~~pR~YSIaS~p~~~~~~v~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~v~-~~~g~F 178 (340)
.||||+...+| ...+|+|||+|+|. .+.++|+|+ +...|.+|+||.++++ |+.|.+. +|.|.|
T Consensus 48 ~pGQ~v~l~~~~~~~~~~r~ySi~s~~~--~~~~~~~v~---------~~~~G~~s~~l~~l~~--Gd~v~v~~gP~G~~ 114 (271)
T 4fk8_A 48 NNGEFTMVGLEVDGKPLTRAYSIVSPNY--EEHLEFFSI---------KVQNGPLTSRLQHLKV--GDPVLIGKKPTGTL 114 (271)
T ss_dssp CTTCEEEEEEEETTEEEEEEEECCSCTT--SSSEEEEEE---------CCTTCTTHHHHTTCCT--TCEEEEESCCBCSC
T ss_pred CCCCEEEEEccCCCceeeeeEeccCCCC--CCcEEEEEE---------EECCCchhhHHhcCCC--CCEEEEecCCCcce
Confidence 68999988887 23589999999985 367898874 3357999999999999 9999999 999999
Q ss_pred CCC--CCCCCeEEEeCCcchhhHHHHHHHHHHhcCCCCCCCEEEEEeccCCchhhhHHHHHHhHhcCC--------Cccc
Q 019521 179 PRP--PPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDG--------VFSE 248 (340)
Q Consensus 179 ~l~--~~~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~eL~~~~~~~g--------~l~~ 248 (340)
.++ ...++++|||+||||||++++++++...... .+++|+||+|+.+|++|.+||+++.+.+. ++
T Consensus 115 ~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~~---~~v~l~~~~r~~~~~~~~~el~~l~~~~~~~~~~~~~~~-- 189 (271)
T 4fk8_A 115 VADNLLPGKTLWMLSTGTGLAPFMSIIRDPDIYERF---DKVVLTHTCRLKGELAYMDYIKHDLPGHEYLGDVIREKL-- 189 (271)
T ss_dssp CGGGBCCCSEEEEEECGGGGHHHHHHTTCHHHHHHC---SEEEEEECCCSHHHHHHHHHHHTCCTTCTTHHHHHHHHE--
T ss_pred ecCCcCCCCeEEEEECCEEHHHHHHHHHHHHhcCCC---CCEEEEEecCCHHHHhHHHHHHHHHHhCccccccccceE--
Confidence 887 3678999999999999999999998765544 78999999999999999999999876533 46
Q ss_pred cCCCcEEEEEecCCC-CccchhhhHHHhHHHHHHh----h-cCCCEEEEeCCCCccHHHHHHHHHHHHHHhCCCCHHHHH
Q 019521 249 AKGGGFYVAFSRKQP-QKVYVQHKMLEQSQRIWNL----L-LSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAA 322 (340)
Q Consensus 249 ~~~~~~~~a~Sr~~~-~~~yVqd~l~~~~~~l~~~----l-~~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~a~ 322 (340)
+++.++|+++. .++++++.+.+. ..+.++ + .++..+|+|||+ .|++++++.|.+.......
T Consensus 190 ----~~~~~~s~~~~~~~G~v~~~~~~~-~l~~~~~~~~~~~~~~~v~vCGp~-~m~~~v~~~l~~~gv~~~~------- 256 (271)
T 4fk8_A 190 ----VYYPTVTREEFENEGRITDLIASG-KLFTDLDMPPFSPEQDRVMLCGST-AMLKDTTELLKKAGLVEGK------- 256 (271)
T ss_dssp ----EEEECC-------CCHHHHHHHHS-HHHHHTTCCCCCTTTEEEEEEECH-HHHHHHHHHHHHTTCCBCB-------
T ss_pred ----EEEEEecCCccccccccChHHhcc-hhhhhcccccCCCCCCEEEEECCH-HHHHHHHHHHHHcCCchhh-------
Confidence 78888888764 467888877553 111111 1 247899999999 9999999988765443322
Q ss_pred HHHHHHHHCCCEEEeec
Q 019521 323 NWLKALQRAGRYHVEAW 339 (340)
Q Consensus 323 ~~~~~l~~~~R~~~d~w 339 (340)
+...|+|+.|.|
T Consensus 257 -----i~~~~~~~~E~y 268 (271)
T 4fk8_A 257 -----NSAPGHYVIERA 268 (271)
T ss_dssp -----TTBCBSEEEEES
T ss_pred -----cCCCCcEEEEEe
Confidence 233678888875
No 25
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=99.95 E-value=4.7e-28 Score=234.96 Aligned_cols=178 Identities=16% Similarity=0.226 Sum_probs=145.2
Q ss_pred CCCHHHHHHhcCC-----CCcceeecCCCCCCCCCeEEEEEEEEEecCCCCCccCCCCcccccc-CCCCCCcEEEEEeec
Q 019521 102 QMPIDWLVQLVPP-----LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAG-LDPQQGIYIPAWFQK 175 (340)
Q Consensus 102 ~~p~~~l~~~lp~-----~~pR~YSIaS~p~~~~~~v~l~V~~v~~~~~~~~~~~G~~S~~L~~-l~~~~G~~v~v~~~~ 175 (340)
..||||+...+|+ ..+|+|||+|+|. .+.++|+|+. ...|.+|+||.+ +++ ||.|.+.+|.
T Consensus 183 ~~pGQ~v~l~~~~~~~~~~~~R~YSi~s~p~--~~~~~i~Vk~---------~~~G~~S~~L~~~l~~--Gd~v~v~gP~ 249 (396)
T 1gvh_A 183 YRPGQYLGVWLKPEGFPHQEIRQYSLTRKPD--GKGYRIAVKR---------EEGGQVSNWLHNHANV--GDVVKLVAPA 249 (396)
T ss_dssp CCTTCEEEEEECCTTCSSCEEEEEECCSCCC--SSCEEEEEEC---------CTTCHHHHHHHHTCCT--TCEEEEEEEE
T ss_pred CCCCCeEEEEecCCCCccceeecceeccCCC--CCeEEEEEEE---------cCCCcchHHHHhcCCC--CCEEEEEcCC
Confidence 3689998887763 3589999999985 4789999853 346999999996 999 9999999999
Q ss_pred CCCCCC-CCCCCeEEEeCCcchhhHHHHHHHHHHhcCCCCCCCEEEEEeccCCchhhhHHHHHHhHhcCCCccccCCCcE
Q 019521 176 GSLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGF 254 (340)
Q Consensus 176 g~F~l~-~~~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~eL~~~~~~~g~l~~~~~~~~ 254 (340)
|.|.++ +..+|++|||+|||||||++|++++...... .+++|+||+|+.+|++|++||+++.+.++++ ++
T Consensus 250 G~f~l~~~~~~~~vlIagGtGitP~~s~l~~l~~~~~~---~~v~l~~~~r~~~~~~~~~el~~l~~~~~~~------~~ 320 (396)
T 1gvh_A 250 GDFFMAVADDTPVTLISAGVGQTPMLAMLDTLAKAGHT---AQVNWFHAAENGDVHAFADEVKELGQSLPRF------TA 320 (396)
T ss_dssp CSCCCCCCTTCCEEEEEEGGGGHHHHHHHHHHHHHTCC---SCEEEEEEESCTTTCCSHHHHHHHHHTSSSE------EE
T ss_pred cceECCCCCCCCEEEEecchhHhHHHHHHHHHHhcCCC---CcEEEEEEeCCHHHhhhHHHHHHHHHHCCCe------EE
Confidence 999997 6778999999999999999999999876544 7899999999999999999999998765778 89
Q ss_pred EEEEecCCC---------CccchhhhHHHhHHHHHHh-hcCCCEEEEeCCCCccHHHHHHHHHH
Q 019521 255 YVAFSRKQP---------QKVYVQHKMLEQSQRIWNL-LLSKASIYVAGSATKMPSDVWSTFEE 308 (340)
Q Consensus 255 ~~a~Sr~~~---------~~~yVqd~l~~~~~~l~~~-l~~~~~iyvCG~~~~M~~~v~~~L~~ 308 (340)
++++|+++. ..++++....+ +. ...+..+|+|||+ +|++++++.|.+
T Consensus 321 ~~~~s~~~~~~~~~~~~~~~G~~~~~~l~------~~~~~~~~~vyvCGp~-~m~~~v~~~L~~ 377 (396)
T 1gvh_A 321 HTWYRQPSEADRAKGQFDSEGLMDLSKLE------GAFSDPTMQFYLCGPV-GFMQFTAKQLVD 377 (396)
T ss_dssp EEEESSCCHHHHHHTCCSEESSCCGGGSS------SCCCCTTCEEEEESCH-HHHHHHHHHHHH
T ss_pred EEEECCCCccccccCccCccCcCCHHHHh------hccCCCCCEEEEeCCH-HHHHHHHHHHHH
Confidence 999998653 13444432111 11 1127899999998 999999888764
No 26
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A*
Probab=99.95 E-value=1.1e-27 Score=232.63 Aligned_cols=182 Identities=16% Similarity=0.222 Sum_probs=147.3
Q ss_pred CCCHHHHHHhc--C--C---CCcceeecCCCCCCCCCeEEEEEEEEEecCCCCCccCCCCccccc-cCCCCCCcEEEEEe
Q 019521 102 QMPIDWLVQLV--P--P---LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLA-GLDPQQGIYIPAWF 173 (340)
Q Consensus 102 ~~p~~~l~~~l--p--~---~~pR~YSIaS~p~~~~~~v~l~V~~v~~~~~~~~~~~G~~S~~L~-~l~~~~G~~v~v~~ 173 (340)
..||||+...+ | + ..+|+|||+|+|. ++.++|+|+...- .+..+.|.+|+||. ++++ ||.|.+.+
T Consensus 184 ~~pGQ~v~l~~~~~~~~~~~~~~R~ySi~s~p~--~~~~~i~Vk~~~~---~~~~~~G~~S~~L~~~l~~--Gd~v~v~g 256 (399)
T 4g1v_A 184 ITPGQYITVNTHPIRQENQYDALRHYSLCSAST--KNGLRFAVKMEAA---RENFPAGLVSEYLHKDAKV--GDEIKLSA 256 (399)
T ss_dssp CCTTCEEEEEECCCSTTCCSCEEEEEEBSCSCC--TTCEEEEEECCCC---BTTBCCCHHHHHHHHTCCT--TCEEEEEE
T ss_pred CCCCCEEEEEEeCCCCCCccceeeeecccCCCC--CCeEEEEEEeccC---CCCCCCCEehhHHHhCCCC--CCEEEEEe
Confidence 35899988875 4 3 3579999999985 4789999854211 01135899999996 8999 99999999
Q ss_pred ecCCCCCC-C----CCCCeEEEeCCcchhhHHHHHHHHHHhcCCCCCCCEEEEEeccCCchhhhHHHHHHhHhcCCCccc
Q 019521 174 QKGSLPRP-P----PSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSE 248 (340)
Q Consensus 174 ~~g~F~l~-~----~~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~eL~~~~~~~g~l~~ 248 (340)
|.|.|.++ + ..+|++|||+|||||||++|++++...... .+++++||+|+.+|++|.++|+++.+.++++
T Consensus 257 P~G~f~l~~~~~~~~~~~~vlIagG~GitP~~s~l~~l~~~~~~---~~v~l~~~~r~~~~~~~~~el~~l~~~~~~~-- 331 (399)
T 4g1v_A 257 PAGDFAINKELIHQNEVPLVLLSSGVGVTPLLAMLEEQVKCNPN---RPIYWIQSSYDEKTQAFKKHVDELLAECANV-- 331 (399)
T ss_dssp EECSCCCCTTTTTCSSSCEEEEEEGGGHHHHHHHHHHHHHHCTT---SCEEEEEEESSSTTSTTHHHHHHHHTTCSSE--
T ss_pred cccceeeCcccccCCCCCEEEEecceeHhHHHHHHHHHHHcCCC---CCEEEEEecCCHHHhhhHHHHHHHHHhCCCc--
Confidence 99999998 5 578999999999999999999999887654 7899999999999999999999998766778
Q ss_pred cCCCcEEEEEecCCCCccchhhhHHHhHHHHHHhhcCCCEEEEeCCCCccHHHHHHHHHHH
Q 019521 249 AKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEI 309 (340)
Q Consensus 249 ~~~~~~~~a~Sr~~~~~~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i 309 (340)
++++++|++. ++++.. .+.+.+.+++.+|+|||+ +|++++++.|.+.
T Consensus 332 ----~~~~~~s~~~---g~~~~~------~l~~~~~~~~~vyvCGp~-~m~~~v~~~L~~~ 378 (399)
T 4g1v_A 332 ----DKIIVHTDTE---PLINAA------FLKEKSPAHADVYTCGSL-AFMQAMIGHLKEL 378 (399)
T ss_dssp ----EEEEEETTTS---CCCCHH------HHHHHSCSSCEEEEEECH-HHHHHHHHHHHHT
T ss_pred ----EEEEEEeCCC---CcccHH------HHHhhCCCCCEEEEECCH-HHHHHHHHHHHHc
Confidence 8999999864 455432 222234448999999998 9999998888654
No 27
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=99.95 E-value=7.2e-28 Score=222.29 Aligned_cols=185 Identities=17% Similarity=0.210 Sum_probs=148.5
Q ss_pred CCCHHHHHHhcCC----CCcceeecCCCCCCCCCeEEEEEEEEEecCCCCCccCCCCccccccCCCCCCcEEEEE-eecC
Q 019521 102 QMPIDWLVQLVPP----LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAW-FQKG 176 (340)
Q Consensus 102 ~~p~~~l~~~lp~----~~pR~YSIaS~p~~~~~~v~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~v~-~~~g 176 (340)
..||||+...+|. ..+|+|||+|+|.. +.++|+|+. .+.|.+|+||.++++ |+.|.+. +|.|
T Consensus 44 ~~pGQ~v~l~~~~~~g~~~~R~ySi~s~~~~--~~~~l~v~~---------~~~G~~s~~l~~l~~--Gd~v~v~~gP~G 110 (272)
T 2bgi_A 44 FRSGEFVMIGLLDDNGKPIMRAYSIASPAWD--EELEFYSIK---------VPDGPLTSRLQHIKV--GEQIILRPKPVG 110 (272)
T ss_dssp CCTTCEEEEEEECTTSCEEEEEEECCSCTTC--SEEEEEEEC---------CTTCTTHHHHTTCCT--TCEEEEEEEEEC
T ss_pred cCCCCEEEEEeccCCCCeeeeeeeeccCCCC--CeEEEEEEE---------ccCCCchhHHHhCCC--CCEEEEeeCCCC
Confidence 3689998888772 36899999999853 789999843 357999999999999 9999999 8999
Q ss_pred CCCCC-CC-CCCeEEEeCCcchhhHHHHHHHHHHhcCCCCCCCEEEEEeccCCchhhhHHHHH-HhHh-----cC--CCc
Q 019521 177 SLPRP-PP-SVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWL-SHSL-----ND--GVF 246 (340)
Q Consensus 177 ~F~l~-~~-~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~eL~-~~~~-----~~--g~l 246 (340)
.|.++ .. .++++|||+|||||||++|++++...... .+++|+||+|+.+|++|.+||+ ++.+ .+ +++
T Consensus 111 ~f~~~~~~~~~~~vliagG~GiaP~~~~l~~l~~~~~~---~~v~l~~~~r~~~~~~~~~el~~~l~~~~~~~~~~~~~~ 187 (272)
T 2bgi_A 111 TLVIDALLPGKRLWFLATGTGIAPFASLMREPEAYEKF---DEVIMMHACRTVAELEYGRQLVEALQEDPLIGELVEGKL 187 (272)
T ss_dssp SCCGGGBCCCSEEEEEEEGGGGHHHHHHTTCGGGGTSC---SEEEEEEEESSSGGGHHHHHHHHHHHHCTTTTTTSTTTE
T ss_pred cccccccccCCeEEEEeecccHHHHHHHHHHHHhcCCC---CcEEEEEEeCCHHHhhHHHHHHHHHHhcchhhcccCCcE
Confidence 99887 43 68999999999999999999987654333 7899999999999999999999 8876 22 578
Q ss_pred cccCCCcEEEEEecCCC-CccchhhhHHHhH-HHHHHh--hc-CCCEEEEeCCCCccHHHHHHHHHHH
Q 019521 247 SEAKGGGFYVAFSRKQP-QKVYVQHKMLEQS-QRIWNL--LL-SKASIYVAGSATKMPSDVWSTFEEI 309 (340)
Q Consensus 247 ~~~~~~~~~~a~Sr~~~-~~~yVqd~l~~~~-~~l~~~--l~-~~~~iyvCG~~~~M~~~v~~~L~~i 309 (340)
+++.++|+++. .+++|++.+.+.. +....+ +. +++.+|+|||+ +|++++++.|.+.
T Consensus 188 ------~~~~~~s~~~~~~~g~v~~~l~~~~l~~~~~~~~~~~~~~~vyvCGp~-~m~~~v~~~l~~~ 248 (272)
T 2bgi_A 188 ------KYYPTTTREEFHHMGRITDNLASGKVFEDLGIAPMNPETDRAMVCGSL-AFNVDVMKVLESY 248 (272)
T ss_dssp ------EEEEEESSSCCSSBCCHHHHHHSCHHHHHHTCCCCCTTTEEEEEEECH-HHHHHHHHHHHTT
T ss_pred ------EEEEEecCCccccCceechHHHhhhHhhhcccccCCCCCcEEEEECCH-HHHHHHHHHHHHc
Confidence 88889998743 4789998876532 221111 12 47899999998 9999998877653
No 28
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A*
Probab=99.94 E-value=4.8e-28 Score=221.37 Aligned_cols=185 Identities=17% Similarity=0.201 Sum_probs=148.0
Q ss_pred CCCHHHHHHhcCC---CCcceeecCCCCCCCCCeEEEEEEEEEecCCCCCccCCCCccccccCCCCCCcEEEEE-eecCC
Q 019521 102 QMPIDWLVQLVPP---LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAW-FQKGS 177 (340)
Q Consensus 102 ~~p~~~l~~~lp~---~~pR~YSIaS~p~~~~~~v~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~v~-~~~g~ 177 (340)
..||||+...+|. ..+|+|||+|+|.. +.++|+|+. .+.|.+|+||.++++ |+.|.+. +|.|.
T Consensus 31 ~~pGq~v~l~~~~~g~~~~R~ySi~s~~~~--~~~~~~i~~---------~~~G~~s~~l~~l~~--Gd~v~v~~gp~G~ 97 (257)
T 2qdx_A 31 FKTGQFVMIGLEVDGRPLMRAYSIASPNYE--EHLEFFSIK---------VPDGPLTSRLQHLKE--GDELMVSRKPTGT 97 (257)
T ss_dssp CCTTCEEEEEEEETTEEEEEEEECCSCTTS--SEEEEEEEC---------CTTCTTHHHHTTCCT--TCEEEECSCCBCS
T ss_pred cCCCCEEEEEecCCCCceeeeeEeecCCCC--CeEEEEEEE---------eCCCcchhHHHhCCC--CCEEEEecCCCCC
Confidence 3689998877763 46899999999853 789998843 357999999999999 9999999 89999
Q ss_pred CCCC-C-CCCCeEEEeCCcchhhHHHHHHHHHHhcCCCCCCCEEEEEeccCCchhhhHHHHH-HhHh-----cC--CCcc
Q 019521 178 LPRP-P-PSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWL-SHSL-----ND--GVFS 247 (340)
Q Consensus 178 F~l~-~-~~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~eL~-~~~~-----~~--g~l~ 247 (340)
|.++ . ..++++|||+|||||||+++++++...... .+++|+||+|+.+|++|.+||+ ++.+ .+ +++
T Consensus 98 f~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~~---~~v~l~~~~r~~~~~~~~~el~~~l~~~~~~~~~~~~~~- 173 (257)
T 2qdx_A 98 LVHDDLLPGKHLYLLSTGTGMAPFLSVIQDPETYERY---EKVILVHGVRWVSELAYADFITKVLPEHEYFGDQVKEKL- 173 (257)
T ss_dssp CCGGGBCSCSEEEEEEEGGGGHHHHHHTTCHHHHHHC---SEEEEEEEESSGGGCTTHHHHHTTGGGCTTTHHHHHHHE-
T ss_pred ccCCcccCCCeEEEEEeceEHHHHHHHHHHHHhcCCC---CeEEEEEEcCCHHHhHhHHHHHHHHHhchhhhccCCCcE-
Confidence 9887 4 368999999999999999999988765433 6899999999999999999999 8866 11 567
Q ss_pred ccCCCcEEEEEecCCC-CccchhhhHHHhH-HHHHHh--h-cCCCEEEEeCCCCccHHHHHHHHHHH
Q 019521 248 EAKGGGFYVAFSRKQP-QKVYVQHKMLEQS-QRIWNL--L-LSKASIYVAGSATKMPSDVWSTFEEI 309 (340)
Q Consensus 248 ~~~~~~~~~a~Sr~~~-~~~yVqd~l~~~~-~~l~~~--l-~~~~~iyvCG~~~~M~~~v~~~L~~i 309 (340)
+++.++|+++. .+++|++.+.+.. +....+ + ..++.+|+|||+ +|++++++.|.+.
T Consensus 174 -----~~~~~~s~~~~~~~g~v~~~l~~~~l~~~~~~~~~~~~~~~vyvCGp~-~m~~~v~~~l~~~ 234 (257)
T 2qdx_A 174 -----IYYPLVTREPFRNQGRQTDLMRSGKLFEDIGLPPMNPQDDRAMICGSP-SMLEETSAVLDSF 234 (257)
T ss_dssp -----EEEEEESSSCCSSBSCHHHHHHHSHHHHHHTCCCCCTTTEEEEEEECH-HHHHHHHHHHHHT
T ss_pred -----EEEEEecCCCcccCceechhhhhhhHHHhcccccCCcCCCEEEEECCH-HHHHHHHHHHHHc
Confidence 78889998743 4689998876532 221111 1 247899999998 9999998887653
No 29
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A*
Probab=99.94 E-value=1.7e-27 Score=231.60 Aligned_cols=181 Identities=18% Similarity=0.277 Sum_probs=144.2
Q ss_pred CCHHHHHHhcC--C---CCcceeecCCCCCCCCCeEEEEEEEEEecCCCCCccCCCCccccc-cCCCCCCcEEEEEeecC
Q 019521 103 MPIDWLVQLVP--P---LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLA-GLDPQQGIYIPAWFQKG 176 (340)
Q Consensus 103 ~p~~~l~~~lp--~---~~pR~YSIaS~p~~~~~~v~l~V~~v~~~~~~~~~~~G~~S~~L~-~l~~~~G~~v~v~~~~g 176 (340)
.||||+...+| . ..+|+|||+|+|. .+.++|+|+.+.. ...+.|.+|+||. ++++ ||.|.+.+|.|
T Consensus 186 ~pGQ~v~l~~~~~~~~~~~~R~YSi~s~p~--~~~~~i~Vk~~~~----~~~~~G~~S~~L~~~l~~--Gd~v~v~gP~G 257 (403)
T 1cqx_A 186 EPGQYTSVAIDVPALGLQQIRQYSLSDMPN--GRTYRISVKREGG----GPQPPGYVSNLLHDHVNV--GDQVKLAAPYG 257 (403)
T ss_dssp CTTCEEEEEEEETTTTEEEEEEEECCSCCC--SSCEEEEEECCCB----TTBCCCHHHHHHHHHCCT--TCEEEECCCBC
T ss_pred CCCCEEEEEEecCCCCcceeecceecCCCC--CCeEEEEEEECCC----CCCCCCeehHHHhhCCCC--CCEEEEecCcc
Confidence 68999877775 2 3579999999985 4789999864310 1123699999998 5999 99999999999
Q ss_pred CCCCC-CCCCCeEEEeCCcchhhHHHHHHHHHHhcCCCCCCCEEEEEeccCCchhhhHHHHHHhHhcCCCccccCCCcEE
Q 019521 177 SLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFY 255 (340)
Q Consensus 177 ~F~l~-~~~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~eL~~~~~~~g~l~~~~~~~~~ 255 (340)
.|.++ +..+|++|||+|||||||++|++++.. ... .+++|+||+|+.+|++|++||+++.+.++++ +++
T Consensus 258 ~f~l~~~~~~~~vlIagGtGitP~~s~l~~l~~-~~~---~~v~l~~~~r~~~~~~~~~el~~l~~~~~~~------~~~ 327 (403)
T 1cqx_A 258 SFHIDVDAKTPIVLISGGVGLTPMVSMLKVALQ-APP---RQVVFVHGARNSAVHAMRDRLREAAKTYENL------DLF 327 (403)
T ss_dssp SCSCCTTCCSCEEEEESSCCHHHHHHHHHHHTC-SSC---CCEEEEEEESCSSSCHHHHHHHHHHHHCTTE------EEE
T ss_pred CcccCCCCCCCEEEEEecccHhhHHHHHHHHHh-CCC---CcEEEEEEeCChhhCcHHHHHHHHHHhCCCc------EEE
Confidence 99997 677899999999999999999999876 333 7899999999999999999999998765778 899
Q ss_pred EEEecCCCC---------ccchhhh-HHHhHHHHHHhhcCCCEEEEeCCCCccHHHHHHHHHH
Q 019521 256 VAFSRKQPQ---------KVYVQHK-MLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEE 308 (340)
Q Consensus 256 ~a~Sr~~~~---------~~yVqd~-l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~v~~~L~~ 308 (340)
+++|++... .++++.. +.+. + . ..++.+|+|||+ +|+++|++.|.+
T Consensus 328 ~~~s~~~~~~~~~~~~~~~G~i~~~~l~~~---~--~-~~~~~vyvCGp~-~m~~~v~~~L~~ 383 (403)
T 1cqx_A 328 VFYDQPLPEDVQGRDYDYPGLVDVKQIEKS---I--L-LPDADYYICGPI-PFMRMQHDALKN 383 (403)
T ss_dssp EEESSCCTTCCBTTTBSEESSCCGGGSHHH---H--C-CTTCEEEEESSH-HHHHHHHHHHHH
T ss_pred EEECCCCcccccccccCcCCCcCHHHHhhc---c--C-CCCCEEEEeCCH-HHHHHHHHHHHH
Confidence 999986542 2344432 2111 0 1 237899999998 999999888765
No 30
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=99.94 E-value=2e-27 Score=218.59 Aligned_cols=193 Identities=17% Similarity=0.137 Sum_probs=142.6
Q ss_pred CCCHHHHHHhcC---CCCcceeecCCCCCCCCCeEEEEEEEEEecCCCCCccCCCCccccccCCCCCCcEEEEEeecCC-
Q 019521 102 QMPIDWLVQLVP---PLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGS- 177 (340)
Q Consensus 102 ~~p~~~l~~~lp---~~~pR~YSIaS~p~~~~~~v~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~v~~~~g~- 177 (340)
..||||+...++ ...+|+|||+|+|. .++.++|+|+++......+....|.+|+||.++++ |+.|.+.+|.|.
T Consensus 43 ~~pGQ~v~l~~~~~g~~~~R~ySi~s~~~-~~~~~~l~vk~~~~~~~~~~~~~G~~s~~l~~l~~--Gd~v~v~gP~G~~ 119 (270)
T 2cnd_A 43 LPIGKHIFVCATIEGKLCMRAYTPTSMVD-EIGHFDLLVKVYFKNEHPKFPNGGLMTQYLDSLPV--GSYIDVKGPLGHV 119 (270)
T ss_dssp CCTTCEEEEEEEETTEEEEEEECCCSCTT-CCSEEEEEEECCCSSCBTTBTTCCHHHHHHHHCCT--TCEEEEEEEECSE
T ss_pred CCCCCEEEEEeeeCCcEEEEeeccCCCcc-CCCEEEEEEEEeccCcccccCCCCchhhHHhcCCC--CCEEEEECCcccc
Confidence 368998776654 24689999999985 35899999976532111111236999999999999 999999999996
Q ss_pred -------CCCCC---CCCCeEEEeCCcchhhHHHHHHHHHHhcCCCCCCCEEEEEeccCCchhhhHHHHHHhHhcCC-Cc
Q 019521 178 -------LPRPP---PSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDG-VF 246 (340)
Q Consensus 178 -------F~l~~---~~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~eL~~~~~~~g-~l 246 (340)
|.++. ..++++|||+|||||||++|++++...... ...+++|+||+|+.+|++|.+||+++.+.++ ++
T Consensus 120 ~~~~~g~f~l~~~~~~~~~~vliagGtGiaP~~~~l~~l~~~~~~-~~~~v~l~~~~r~~~d~~~~~el~~l~~~~~~~~ 198 (270)
T 2cnd_A 120 EYTGRGSFVINGKQRNARRLAMICGGSGITPMYQIIQAVLRDQPE-DHTEMHLVYANRTEDDILLRDELDRWAAEYPDRL 198 (270)
T ss_dssp ECCSSSCEEETTEEECCSEEEEEEEGGGHHHHHHHHHHHHHTTTT-CCCEEEEEEEESCGGGCTTHHHHHHHHHHCTTTE
T ss_pred eeccccceeccCCcccCCEEEEEeccccHHHHHHHHHHHHhcCCC-CCcEEEEEEEcCCHHHcchHHHHHHHHHHCcCcE
Confidence 45542 468999999999999999999999875210 1278999999999999999999999987533 57
Q ss_pred cccCCCcEEEEEecC---CC----CccchhhhHHHhHHHHHHhhcCCCEEEEeCCCCccHHH-HHHHHHH
Q 019521 247 SEAKGGGFYVAFSRK---QP----QKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSD-VWSTFEE 308 (340)
Q Consensus 247 ~~~~~~~~~~a~Sr~---~~----~~~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~-v~~~L~~ 308 (340)
+++.++|++ +. .+++|++.+.+. +......+..+|+|||+ +|+++ +++.|.+
T Consensus 199 ------~~~~~~s~~~~~~~~~~~~~g~v~~~~l~~---~l~~~~~~~~vyvCGp~-~m~~~~~~~~L~~ 258 (270)
T 2cnd_A 199 ------KVWYVIDQVKRPEEGWKYSVGFVTEAVLRE---HVPEGGDDTLALACGPP-PMIQFAISPNLEK 258 (270)
T ss_dssp ------EEEEEESCCSCGGGCCCSEESSCCHHHHHH---HSCCCSSSEEEEEECCH-HHHHTTTHHHHHT
T ss_pred ------EEEEEECCCCCCCCCcccccccCCHHHHHH---hcCCCcCCEEEEEECCH-HHHHHHHHHHHHH
Confidence 788888873 11 367888764332 11111125689999998 89886 4666643
No 31
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=99.94 E-value=8.1e-27 Score=214.10 Aligned_cols=169 Identities=18% Similarity=0.231 Sum_probs=137.2
Q ss_pred CCHHHHHHhcCC---CCcceeecCCCCCCCCCeEEEEEEEEEecCCCCCccCCCCccccccCCCCCCcEEEEEeecCC-C
Q 019521 103 MPIDWLVQLVPP---LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGS-L 178 (340)
Q Consensus 103 ~p~~~l~~~lp~---~~pR~YSIaS~p~~~~~~v~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~v~~~~g~-F 178 (340)
.||||+...+|. ..+|+|||+|+|. ..+.++|+|+. .+.|.+|+||.++++ ||.|.+.+|.|. |
T Consensus 35 ~pGQ~v~l~~~~~~~~~~R~ySi~s~~~-~~~~l~~~vk~---------~~~G~~S~~l~~l~~--Gd~v~v~gP~G~~f 102 (262)
T 1ep3_B 35 LPGQFLHLAVPNGAMLLRRPISISSWDK-RAKTCTILYRI---------GDETTGTYKLSKLES--GAKVDVMGPLGNGF 102 (262)
T ss_dssp STTCEEEECCSCTTCCSCEEEECCEEET-TTTEEEEEEEC---------CCTTSHHHHHHTCCT--TCEEEEEEEESBCC
T ss_pred CCCceEEEEcCCCCceeeEEEEeeeecC-CCCEEEEEEEE---------ecCCchHHHHhcCCC--CCEEEEEcccCCCc
Confidence 689998887775 6899999999985 35889999853 346999999999999 999999999997 9
Q ss_pred CCCC--CCCCeEEEeCCcchhhHHHHHHHHHHhcCCCCCCCEEEEEeccCCchhhhHHHHHHhHhcCCCccccCCCcEEE
Q 019521 179 PRPP--PSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYV 256 (340)
Q Consensus 179 ~l~~--~~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~eL~~~~~~~g~l~~~~~~~~~~ 256 (340)
.++. ..+|++|||+|||||||++|++++.... .+++|+||+|+++|++|.+||+++... .+ ++
T Consensus 103 ~l~~~~~~~~~lliagGtGitP~~s~l~~l~~~~-----~~v~l~~~~r~~~~~~~~~el~~l~~~--~~--------~~ 167 (262)
T 1ep3_B 103 PVAEVTSTDKILIIGGGIGVPPLYELAKQLEKTG-----CQMTILLGFASENVKILENEFSNLKNV--TL--------KI 167 (262)
T ss_dssp CCTTCCTTSEEEEEEEGGGSHHHHHHHHHHHHHT-----CEEEEEEEESSGGGCCCHHHHHTSTTE--EE--------EE
T ss_pred cCCCccCCCeEEEEECcCcHHHHHHHHHHHHHcC-----CeEEEEEEcCCHHHhhhHHHHhhhccC--cE--------EE
Confidence 9883 4789999999999999999999998753 679999999999999999999987532 23 22
Q ss_pred EEecCC--CCccchhhhHHHhHHHHHHhhcCCCEEEEeCCCCccHHHHHHHHHH
Q 019521 257 AFSRKQ--PQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEE 308 (340)
Q Consensus 257 a~Sr~~--~~~~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~v~~~L~~ 308 (340)
+ +++. ..+++|++.+.+. +.++..+|+|||+ .|++++++ |.+
T Consensus 168 ~-~~~~~~~~~g~v~~~l~~~-------~~~~~~vyvCGp~-~m~~~v~~-l~~ 211 (262)
T 1ep3_B 168 A-TDDGSYGTKGHVGMLMNEI-------DFEVDALYTCGAP-AMLKAVAK-KYD 211 (262)
T ss_dssp E-ETTCSSSEESCHHHHHHHC-------CSCCSEEEEESCH-HHHHHHHH-HTT
T ss_pred E-ECCCCCcceeehHHHHHhh-------ccCCCEEEEECCH-HHHHHHHH-HHh
Confidence 2 3433 2367888866542 3447899999998 99999888 754
No 32
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.93 E-value=3.6e-26 Score=215.93 Aligned_cols=173 Identities=13% Similarity=0.188 Sum_probs=139.7
Q ss_pred CCCHHHHHHhcCCCCcceeecCCCCCCCCCeEEEEEEEEEecCCCCCccCCC-Cccccc-cCCCCCCcEEEEEeecCCCC
Q 019521 102 QMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGL-CSVWLA-GLDPQQGIYIPAWFQKGSLP 179 (340)
Q Consensus 102 ~~p~~~l~~~lp~~~pR~YSIaS~p~~~~~~v~l~V~~v~~~~~~~~~~~G~-~S~~L~-~l~~~~G~~v~v~~~~g~F~ 179 (340)
..||||+...+|.-.+|+|||+|+|.. .+.++|+|+ +...|. +|+||. ++++ |+.|.+.+|.|.|.
T Consensus 39 ~~pGQ~v~l~~~~g~~R~ySi~s~~~~-~~~l~i~Vk---------~~~~G~g~S~~L~~~l~~--Gd~v~v~gP~g~f~ 106 (321)
T 2pia_A 39 FEAGANLTVAVPNGSRRTYSLCNDSQE-RNRYVIAVK---------RDSNGRGGSISFIDDTSE--GDAVEVSLPRNEFP 106 (321)
T ss_dssp CCTTCEEEEECTTSCEEEEECCSCTTC-CSEEEEEEE---------CCTTSCSHHHHHHHSCCT--TCEEEECCCBCCSC
T ss_pred CCCCCEEEEECCCCCcEEEEeCCCCCC-CCeEEEEEE---------EecCCcchhHHHHhcCCC--CCEEEEeCCccccc
Confidence 369999888888778999999999853 578999984 345688 899999 8999 99999999999999
Q ss_pred CCCCCCCeEEEeCCcchhhHHHHHHHHHHhcCCCCCCCEEEEEeccCCchhhhHHHHHHhHhcCCCccccCCCcEEEEEe
Q 019521 180 RPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFS 259 (340)
Q Consensus 180 l~~~~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~eL~~~~~~~g~l~~~~~~~~~~a~S 259 (340)
++...++++|||+|||||||++|++++.... . .+++|+||+|+.+|++|.+||+++... .++ .+.++
T Consensus 107 l~~~~~~~vliagG~GItP~~s~l~~l~~~~-~---~~v~l~~~~r~~~~~~~~~el~~l~~~-~~~--------~~~~~ 173 (321)
T 2pia_A 107 LDKRAKSFILVAGGIGITPMLSMARQLRAEG-L---RSFRLYYLTRDPEGTAFFDELTSDEWR-SDV--------KIHHD 173 (321)
T ss_dssp CCTTCSEEEEEEEGGGHHHHHHHHHHHHHHC-S---SEEEEEEEESCGGGCTTHHHHHSTTTT-TTE--------EEEEC
T ss_pred cCCCCCCEEEEEecccHhHHHHHHHHHHHcC-C---CcEEEEEEECChhhhHHHHHHhcCccC-CeE--------EEEEC
Confidence 9844689999999999999999999998764 2 579999999999999999999988632 344 44556
Q ss_pred cCCC-CccchhhhHHHhHHHHHHhhcCCCEEEEeCCCCccHHHHHHHHHH
Q 019521 260 RKQP-QKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEE 308 (340)
Q Consensus 260 r~~~-~~~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~v~~~L~~ 308 (340)
++.. .+.++++++.. ...+..+|+|||+ +|++++++.|.+
T Consensus 174 ~~~~~g~~~~~~ll~~--------~~~~~~vyvCGP~-~m~~~v~~~l~~ 214 (321)
T 2pia_A 174 HGDPTKAFDFWSVFEK--------SKPAQHVYCCGPQ-ALMDTVRDMTGH 214 (321)
T ss_dssp TTCTTSCCCHHHHHSS--------CCTTEEEEEESCH-HHHHHHHHHTTT
T ss_pred CCcccCccCHHHHhcc--------cCCCCEEEEECCH-HHHHHHHHHHHh
Confidence 5432 23455544332 2347899999998 999999888876
No 33
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=99.83 E-value=1.3e-21 Score=178.59 Aligned_cols=166 Identities=10% Similarity=0.045 Sum_probs=121.5
Q ss_pred CCCHHHHHHhcCC----CCcceeecCCCCCCCCCeEEEEEEEEEecCCCCCcc-CCCCccccccCCCCCCcEEEEEeecC
Q 019521 102 QMPIDWLVQLVPP----LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKR-TGLCSVWLAGLDPQQGIYIPAWFQKG 176 (340)
Q Consensus 102 ~~p~~~l~~~lp~----~~pR~YSIaS~p~~~~~~v~l~V~~v~~~~~~~~~~-~G~~S~~L~~l~~~~G~~v~v~~~~g 176 (340)
..|+||+...+|. ...|+|||+|.+. +.++|.|.+ .. .|.+|+||.++++ ||.|.+.+|.|
T Consensus 39 ~~pGQ~v~l~~~~~~~~~~~R~YSi~~~~~---~~~~i~~~~---------~~~~G~~S~~l~~l~~--Gd~l~v~gP~G 104 (252)
T 2gpj_A 39 DQESAYIKLLFPQAGERPLMRTYTIRQQRD---DEIDVDFVL---------HDTDGPASSWAKTAQV--GELIQIGGPGL 104 (252)
T ss_dssp CCTTCEEEEEECCTTSCCEEEEEECCEEET---TEEEEEEEC---------CSSCCHHHHHHHHCCT--TCEEEEEEEEC
T ss_pred CCCCCeEEEEcccCCCCCCCCceeeeccCC---CEEEEEEEE---------eCCCCcHHHHHhhCCC--CCEEEEecCCC
Confidence 4799998888874 4679999999763 677777642 23 3899999999999 99999999999
Q ss_pred CCCCCCCCCCeEEEeCCcchhhHHHHHHHHHHhcCCCCCCCEEEEEeccCCchhhhHHHHHHhHhcCCCccccCCCcEEE
Q 019521 177 SLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYV 256 (340)
Q Consensus 177 ~F~l~~~~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~eL~~~~~~~g~l~~~~~~~~~~ 256 (340)
.|.++...++++|||+||||||+++|+++... . .++++++++|+.+|... | ... ..+ +++.
T Consensus 105 ~f~l~~~~~~~lliagGtGitPi~s~l~~l~~---~---~~~~~~~~~~~~~d~~~---l---~~~-~~~------~v~~ 165 (252)
T 2gpj_A 105 KKLINFEADWFLLAGDMTALPAISVNLAKLPN---N---AVGYAVIEVLSEADIQP---L---VHP-EHV------ELHW 165 (252)
T ss_dssp CCCCCSSSSEEEEEEEGGGHHHHHHHHHHSCT---T---CEEEEEEEESSGGGCCC---C---CCC-TEE------EEEE
T ss_pred CCcCCCCCceEEEEcchhhHHHHHHHHHhCCC---C---CcEEEEEEECCHHHhhc---c---cCC-CCc------EEEE
Confidence 99987445799999999999999999998743 2 56789999999877542 1 122 345 6666
Q ss_pred EEecCCCC-ccchhhhHHHhHHHHHHhh-cCCCEEEEeCCCCccHHHHHHHHH
Q 019521 257 AFSRKQPQ-KVYVQHKMLEQSQRIWNLL-LSKASIYVAGSATKMPSDVWSTFE 307 (340)
Q Consensus 257 a~Sr~~~~-~~yVqd~l~~~~~~l~~~l-~~~~~iyvCG~~~~M~~~v~~~L~ 307 (340)
+.+.+... ...+.+.+.+. .+ ..+..+|+|||+ +|++++++.|.
T Consensus 166 ~~~~~~~~~g~~~~~~l~~~------~~~~~~~~vy~CGP~-~m~~av~~~l~ 211 (252)
T 2gpj_A 166 VINPEADPEGRPLVERIAQL------PWLAGEPAVWIACEF-NSMRALRRHFK 211 (252)
T ss_dssp EECSSCCTTCHHHHHHHTTS------CCCSSCEEEEEEEEH-HHHHHHHHHHH
T ss_pred EeCCCCCcccHHHHHHHHhc------cCCCCCcEEEEEcCH-HHHHHHHHHHH
Confidence 66544321 11233322211 01 125689999998 99999998887
No 34
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=99.79 E-value=7.2e-20 Score=155.55 Aligned_cols=126 Identities=10% Similarity=0.006 Sum_probs=85.5
Q ss_pred CCCCCCcE-EEEEeecCCCCCCCCCCCeEEEeCCcchhhHHHHHHHHHHhcCCCCCCCEEEEEeccCCchhhhHHHHHHh
Q 019521 161 LDPQQGIY-IPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSH 239 (340)
Q Consensus 161 l~~~~G~~-v~v~~~~g~F~l~~~~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~eL~~~ 239 (340)
+++ ||. +.+.+|.|.|...+..+|++||||||||||+++++++..... .+++|+ |+|+.+|.+|.+||+++
T Consensus 1 L~~--Gd~vl~v~gP~G~~f~~~~~~~~llIaGG~GItPl~sm~~~l~~~~-----~~v~l~-g~r~~~d~~~~~el~~l 72 (158)
T 3lrx_A 1 MKE--GDSLLNVAGPLGTPVPMEKFGKILAIGAYTGIVEVYPIAKAWQEIG-----NDVTTL-HVTFEPMVILKEELEKA 72 (158)
T ss_dssp -------------CCCCCCBCCCCCSEEEEEEETTHHHHHHHHHHHHHHHT-----CEEEEE-EECBGGGCCSHHHHHHH
T ss_pred CcC--CCEeeEEECCCCCCCccCCCCeEEEEEccCcHHHHHHHHHHHHhcC-----CcEEEE-EeCCHHHhhHHHHHHHH
Confidence 456 999 599999998654344689999999999999999999987653 579999 99999999999999998
Q ss_pred HhcCCCccccCCCcEEEEEecCCC--------CccchhhhHHHhHHHHHHhhcCCCEEEEeCCCCccHHHHHHHHHHH
Q 019521 240 SLNDGVFSEAKGGGFYVAFSRKQP--------QKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEI 309 (340)
Q Consensus 240 ~~~~g~l~~~~~~~~~~a~Sr~~~--------~~~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i 309 (340)
... + .+..+++++.. .+++|++.+.+.... .+...||+|||+ +|.+++.+.+.+.
T Consensus 73 ~~~---~------~~~~v~~~~~~~~~~~~~g~~G~v~~~l~~~l~~-----~~~~~vy~CGP~-~mm~~v~~~l~~~ 135 (158)
T 3lrx_A 73 VTR---H------IVEPVPLNPNQDFLANMKNVSQRLKEKVRELLES-----EDWDLVFMVGPV-GDQKQVFEVVKEY 135 (158)
T ss_dssp SSE---E------EECCBCCCTTSCHHHHHHHHHHHHHHHHHHHHHH-----SCCSEEEEESCH-HHHHHHHHHHGGG
T ss_pred Hhc---e------EEEEeeccccccCCCCCCCCcccccHHHHHhhcc-----CCCCEEEEECCH-HHHHHHHHHHHHc
Confidence 643 3 33333333211 246666655432111 146789999998 9999998877654
No 35
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=99.76 E-value=1.6e-18 Score=144.68 Aligned_cols=121 Identities=10% Similarity=-0.020 Sum_probs=87.1
Q ss_pred EEEEeecCCCCCCCCCCCeEEEeCCcchhhHHHHHHHHHHhcCCCCCCCEEEEEeccCCchhhhHHHHHHhHhcCCCccc
Q 019521 169 IPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSE 248 (340)
Q Consensus 169 v~v~~~~g~F~l~~~~~pii~Ia~GtGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~eL~~~~~~~g~l~~ 248 (340)
+.+.+|.|.|...+..++++||||||||||+++++++....+ .++.++ |+|+++|.+|.+||+++.+. +
T Consensus 3 ~~v~GP~G~~~~~~~~~~~llIaGG~GiaPl~sm~~~l~~~~-----~~v~l~-g~R~~~~~~~~~el~~l~~~---~-- 71 (142)
T 3lyu_A 3 LNVAGPLGTPVPMEKFGKILAIGAYTGIVEVYPIAKAWQEIG-----NDVTTL-HVTFEPMVILKEELEKAVTR---H-- 71 (142)
T ss_dssp ----CCCSCCBCCCCCSEEEEEEETTHHHHHHHHHHHHHHTT-----CEEEEE-EEEEGGGCCSHHHHHTTSSE---E--
T ss_pred eeeeCCCCCCccCCCCCeEEEEECcCcHHHHHHHHHHHHhcC-----CcEEEE-EeCCHHHhhHHHHHHHHHhh---e--
Confidence 468899998765544689999999999999999999987643 569999 99999999999999988643 3
Q ss_pred cCCCcEEEEEecCCC--------CccchhhhHHHhHHHHHHhhcCCCEEEEeCCCCccHHHHHHHHHHHH
Q 019521 249 AKGGGFYVAFSRKQP--------QKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIV 310 (340)
Q Consensus 249 ~~~~~~~~a~Sr~~~--------~~~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i~ 310 (340)
.+..+++++.. .+++|++.+.+.. .. .+...||+|||+ +|.+.+.+.+.+..
T Consensus 72 ----~~~~~~~~~~~~~~d~~~g~~G~v~~~l~~~~----~~-~~~~~vy~CGP~-~Mm~av~~~l~~~~ 131 (142)
T 3lyu_A 72 ----IVEPVPLNPNQDFLANMKNVSQRLKEKVRELL----ES-EDWDLVFMVGPV-GDQKQVFEVVKEYG 131 (142)
T ss_dssp ----EEEEECCCTTSCHHHHHHHHHHHHHHHHHHHH----HS-SCCSEEEEESCH-HHHHHHHHHHHHHT
T ss_pred ----EEEEeecccccCCCCCCCCCccchhHHHHHhc----cc-CCCCEEEEECCH-HHHHHHHHHHHHcC
Confidence 44444444321 2456665544321 11 235789999998 99999988887753
No 36
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens}
Probab=99.75 E-value=5.2e-19 Score=152.76 Aligned_cols=134 Identities=13% Similarity=0.216 Sum_probs=92.6
Q ss_pred EEEeecCCCCCC-CCCCCeEEEeCCcchhhHHHHHHHHHHhcC----CCCCCCEEEEEeccCCchhh-hHHHHHHhHhcC
Q 019521 170 PAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSS----SGPAAPIIFFFGCRNEDDFL-YRELWLSHSLND 243 (340)
Q Consensus 170 ~v~~~~g~F~l~-~~~~pii~Ia~GtGIAPf~s~l~~~~~~~~----~~~~~~~~L~~G~R~~~d~l-y~~eL~~~~~~~ 243 (340)
.+.+|.|.|.++ ...+++||||||||||||+++++++..... .....+++|+||+|+.++++ |.+||+++.+.+
T Consensus 2 ~v~GP~G~~~~~~~~~~~~vlIagG~GItP~~s~l~~l~~~~~~~~~~~~~~~v~l~~~~r~~~~~~w~~~~l~~l~~~~ 81 (186)
T 3a1f_A 2 AVDGPFGTASEDVFSYEVVMLVGAGIGVTPFASILKSVWYKYCNNATNLKLKKIYFYWLCRDTHAFEWFADLLQLLESQM 81 (186)
T ss_dssp CTTSTTSHHHHHHTTSSEEEEEEEGGGHHHHHHHHHHHHHHHHHCTTCCCCCEEEEEEEESCTTTTHHHHHHHHHHHHHH
T ss_pred eEECCCCCCccChhhCCeEEEEecCccHHHHHHHHHHHHHHHhhcccCCCCcEEEEEEEECCcchHHHHHHHHHHHHHHH
Confidence 356788988765 566899999999999999999999887531 00237899999999999887 999999997642
Q ss_pred ------CCccccCCCcEEEEEecCCCC---ccchh-----hhHH--------------HhHHHHHHhhc-CCCEEEEeCC
Q 019521 244 ------GVFSEAKGGGFYVAFSRKQPQ---KVYVQ-----HKML--------------EQSQRIWNLLL-SKASIYVAGS 294 (340)
Q Consensus 244 ------g~l~~~~~~~~~~a~Sr~~~~---~~yVq-----d~l~--------------~~~~~l~~~l~-~~~~iyvCG~ 294 (340)
+++ ++++.+|++... +.|++ +.+. ...+.+.+... .+..||+|||
T Consensus 82 ~~~~~~~~~------~~~~~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~gR~~~~~~~~~~~~~~~~~~~~v~~CGP 155 (186)
T 3a1f_A 82 QERNNAGFL------SYNIYLTGWDESQANHFAVHHDEEKDVITGLKQKTLYGRPNWDNEFKTIASQHPNTRIGVFLCGP 155 (186)
T ss_dssp HHTTCTTSE------EEEEEETTC-----------------------CCEEESCCCHHHHHHHHHHHSTTCEEEEEEESC
T ss_pred hhccCCCeE------EEEEEEcCCCCCcccceeeccccccccCCCCccccccCCCCHHHHHHHHHHhCCCCcEEEEEeCC
Confidence 467 888889886321 11222 0000 00111222222 3678999999
Q ss_pred CCccHHHHHHHHHHHH
Q 019521 295 ATKMPSDVWSTFEEIV 310 (340)
Q Consensus 295 ~~~M~~~v~~~L~~i~ 310 (340)
+ +|+++|++++.+..
T Consensus 156 ~-~m~~~v~~~l~~~g 170 (186)
T 3a1f_A 156 E-ALAETLSKQSISNS 170 (186)
T ss_dssp H-HHHHHHHHHHHHTC
T ss_pred H-HHHHHHHHHHHHhh
Confidence 8 99999998887753
No 37
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=63.54 E-value=7 Score=36.15 Aligned_cols=26 Identities=19% Similarity=0.291 Sum_probs=22.2
Q ss_pred CCeEEEeCCcc--hhhHHHHHHHHHHhc
Q 019521 185 VPLILIGPGTG--CAPFRGFVEERAIQS 210 (340)
Q Consensus 185 ~pii~Ia~GtG--IAPf~s~l~~~~~~~ 210 (340)
+.|++.||||| |.|.+++.++...++
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g 30 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARG 30 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTT
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCC
Confidence 57889999997 899999999988763
No 38
>2lnb_A Z-DNA-binding protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, immune system; NMR {Homo sapiens}
Probab=51.89 E-value=32 Score=24.67 Aligned_cols=27 Identities=15% Similarity=0.181 Sum_probs=22.4
Q ss_pred HHhCCCCHHHHHHHHHHHHHCCCEEEe
Q 019521 311 SKEGEASRDSAANWLKALQRAGRYHVE 337 (340)
Q Consensus 311 ~~~~~~~~~~a~~~~~~l~~~~R~~~d 337 (340)
.+..|++..+.++.+.+|+++|++.-.
T Consensus 41 ae~~GvdKKeVdKaik~LKkEgkI~SP 67 (80)
T 2lnb_A 41 VKECQAPKRELNQVLYRMKKELKVSLT 67 (80)
T ss_dssp HHHHTSCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHCCCHHHHHHHHHHHHHcCCccCC
Confidence 344579999999999999999997643
No 39
>3nrs_A Dihydrofolate:folylpolyglutamate synthetase; structural genomics, center for structural genomics of infec diseases, csgid; HET: TLA MES; 1.80A {Yersinia pestis} PDB: 3n2a_A* 3pyz_A* 3qcz_A*
Probab=43.10 E-value=1.7e+02 Score=27.39 Aligned_cols=106 Identities=14% Similarity=0.139 Sum_probs=57.3
Q ss_pred CCeEEEeCCcchhhHHHHHHHHH------HhcCCCCCCCEEEEEeccCCchhhhHHHHHHhHhcCCCccccCCCcEEEEE
Q 019521 185 VPLILIGPGTGCAPFRGFVEERA------IQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAF 258 (340)
Q Consensus 185 ~pii~Ia~GtGIAPf~s~l~~~~------~~~~~~~~~~~~L~~G~R~~~d~ly~~eL~~~~~~~g~l~~~~~~~~~~a~ 258 (340)
.|.+++=++.=-.-+.++++... ..... +++++++|+-...|+ .+-+..+.. .++ .++ ++
T Consensus 311 ~~~vi~D~AHNp~a~~all~~l~~~~~~~~~~~~---~r~i~V~G~~~dkd~--~~~~~~l~~---~~~-----~v~-~~ 376 (437)
T 3nrs_A 311 QPLLILDVAHNPHAARYLVNRLAQVINPVNASKQ---GKVRAVVGMLSDKDI--AGTLACLSE---RVD-----EWY-CA 376 (437)
T ss_dssp TTEEEECCCCSHHHHHHHHHHHHHTC-----------CCEEEEECCBTTBCH--HHHHHHHTT---TCC-----EEE-EC
T ss_pred CCeEEEECCCCHHHHHHHHHHHHhhcchhhhcCC---CCEEEEEeCCCCCCH--HHHHHHHHh---cCC-----EEE-Ee
Confidence 36677777766677778877765 32222 679999998765574 455555543 242 333 33
Q ss_pred ecCCCC------------c-cchhhhHHHhHHHHHHhhcCCCEEEEeCCCCccHHHHHHHH
Q 019521 259 SRKQPQ------------K-VYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTF 306 (340)
Q Consensus 259 Sr~~~~------------~-~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~v~~~L 306 (340)
.-+... . .++.+ ..+..+.+.+...++..|.|||+- -|+.++++.+
T Consensus 377 ~~~~~r~~~~~~l~~~~~~~~~~~d-~~~Ai~~a~~~a~~~D~VLv~GS~-~~v~~~~~~~ 435 (437)
T 3nrs_A 377 PLEGPRGASAGQLAEHLVSARQFSD-VETAWRQAMQDADTQDVVIVCGSF-HTVAHVMAAL 435 (437)
T ss_dssp CCSSTTBCCHHHHHTTCSSCEECSS-HHHHHHHHHHHCCTTCEEEEESSH-HHHHHHHHHT
T ss_pred CCCCCCCCCHHHHHHHHhhCCCcCC-HHHHHHHHHHhcCCCCeEEEEehH-HHHHHHHHHh
Confidence 222110 0 11111 122223333344558899999996 7777766543
No 40
>1w78_A FOLC bifunctional protein; DHFS, dihydrofolate synthase, synthase, ATP-binding, folate biosynthesis, ligase, multifunctional enzyme; HET: KCX PD8 ADP; 1.82A {Escherichia coli} PDB: 1w7k_A*
Probab=34.28 E-value=2.8e+02 Score=25.60 Aligned_cols=107 Identities=8% Similarity=0.098 Sum_probs=56.6
Q ss_pred CeEEEeCCcchhhHHHHHHHHHHhcCCCCCCCEEEEEeccCCchhhhHHHHHHhHhcCCCccccCCCcEEEEEecCCC--
Q 019521 186 PLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP-- 263 (340)
Q Consensus 186 pii~Ia~GtGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~~eL~~~~~~~g~l~~~~~~~~~~a~Sr~~~-- 263 (340)
+.+++=.+.=-.-+.+.++........ +++++++|+-...|+ .+.+..+.+. ++ .++ ++.-+..
T Consensus 297 ~~~i~D~Ahnp~s~~~~l~~l~~~~~~---~~~i~V~g~~~~kd~--~~~~~~l~~~---~d-----~vi-~~~~~~~r~ 362 (422)
T 1w78_A 297 PRVIFDVAHNPHAAEYLTGRMKALPKN---GRVLAVIGMLHDKDI--AGTLAWLKSV---VD-----DWY-CAPLEGPRG 362 (422)
T ss_dssp TEEEEECCCSHHHHHHHHHHHHHSCSC---SCEEEEECCBTTSCH--HHHHHHHHTT---CS-----EEE-ECCCCSSSB
T ss_pred CeEEEECCCCHHHHHHHHHHHHHhCCC---CCEEEEEeccCCCCH--HHHHHHHHhh---CC-----EEE-EECCCCCCC
Confidence 556666666666777777766544322 678999998554454 3444444332 32 333 2221111
Q ss_pred -C---------c-cchhhhHHHhHHHHHHhhcCCCEEEEeCCCCccHHHHHHHHHH
Q 019521 264 -Q---------K-VYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEE 308 (340)
Q Consensus 264 -~---------~-~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~v~~~L~~ 308 (340)
. . .++.+ +.+..+.+.+...++..|++||+- .|..++++.|.+
T Consensus 363 ~~~~~l~~~~~~~~~~~~-~~~ai~~a~~~~~~~d~vLv~GS~-~~~~~~~~~l~~ 416 (422)
T 1w78_A 363 ATAEQLLEHLGNGKSFDS-VAQAWDAAMADAKAEDTVLVCGSF-HTVAHVMEVIDA 416 (422)
T ss_dssp CCHHHHHHHHSSCEECSS-HHHHHHHHHHHCCTTCEEEEESSH-HHHHHHHHHHHH
T ss_pred CCHHHHHHHHhhcccCCC-HHHHHHHHHHhcCCCCEEEEEeeH-HHHHHHHHHHHh
Confidence 0 0 01111 112222333344558899999996 777677665543
No 41
>1ufm_A COP9 complex subunit 4; helix-turn-helix, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: a.4.5.47
Probab=28.78 E-value=57 Score=23.44 Aligned_cols=26 Identities=15% Similarity=0.132 Sum_probs=22.0
Q ss_pred HHHhCCCCHHHHHHHHHHHHHCCCEE
Q 019521 310 VSKEGEASRDSAANWLKALQRAGRYH 335 (340)
Q Consensus 310 ~~~~~~~~~~~a~~~~~~l~~~~R~~ 335 (340)
+.+.-+++.++++.++.+|+.+||+.
T Consensus 36 La~ll~ls~~~vE~~ls~mI~~~~l~ 61 (84)
T 1ufm_A 36 LGALLEIPAAKAEKIASQMITEGRMN 61 (84)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHCcCHHHHHHHHHHHHhCCcEE
Confidence 44556789999999999999999864
No 42
>1p32_A Mitochondrial matrix protein, SF2P32; 2.25A {Homo sapiens} SCOP: d.25.1.1 PDB: 3rpx_A
Probab=23.14 E-value=53 Score=27.89 Aligned_cols=43 Identities=12% Similarity=0.104 Sum_probs=37.2
Q ss_pred cccHHHHHHhccccCCCCCCHHHHHHHHHhccCHHHHHHHHhhcC
Q 019521 29 PIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFAS 73 (340)
Q Consensus 29 ~~tl~~~l~~~~dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~ 73 (340)
.-.|.++|..||+-++ -...|-..|..|+.+..+++.+..|.+
T Consensus 159 De~Lq~~l~~yLeeRG--I~~~la~fl~~y~~~KE~~eYi~WL~~ 201 (209)
T 1p32_A 159 DWALYDHLMDFLADRG--VDNTFADELVELSTALEHQEYITFLED 201 (209)
T ss_dssp CHHHHHHHHHHHHTTT--CSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578999999999999 488899999999999999988887753
No 43
>3jv1_A P22 protein; MAM33 family, hydrolase; 2.00A {Trypanosoma brucei} SCOP: d.25.1.0
Probab=21.36 E-value=59 Score=27.01 Aligned_cols=43 Identities=7% Similarity=0.062 Sum_probs=37.2
Q ss_pred cccHHHHHHhccccCCCCCCHHHHHHHHHhccCHHHHHHHHhhcC
Q 019521 29 PIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFAS 73 (340)
Q Consensus 29 ~~tl~~~l~~~~dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~ 73 (340)
.-.|.+.|..||+-++ -...|...|..|+.+.++++.+..|.+
T Consensus 134 De~Lq~~l~~yLeeRG--I~~~la~fl~~y~~~KEq~EYi~WL~~ 176 (182)
T 3jv1_A 134 EDHLVDSFTSYLSARG--VNDTLANFIDQFSLWSEQADYEEWLSS 176 (182)
T ss_dssp CHHHHHHHHHHHHTTT--CSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999 488899999999999988888877743
Done!