BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019523
(339 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O24457|ODPA3_ARATH Pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic
OS=Arabidopsis thaliana GN=PDH-E1 ALPHA PE=1 SV=1
Length = 428
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/339 (90%), Positives = 322/339 (94%), Gaps = 1/339 (0%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLL K DSVVSTYRDHVHALSK
Sbjct: 91 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLTKSDSVVSTYRDHVHALSK 150
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
GV ARAVMSELFGK TGCCRGQGGSMHMFSKEHN+LGGFAFIGEGIPVATGAAF+SKYRR
Sbjct: 151 GVSARAVMSELFGKVTGCCRGQGGSMHMFSKEHNMLGGFAFIGEGIPVATGAAFSSKYRR 210
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
EVLK+ DCD VT+AFFGDGTCNNGQFFECLNMAAL+KLPI+FVVENNLWAIGMSHLRATS
Sbjct: 211 EVLKQ-DCDDVTVAFFGDGTCNNGQFFECLNMAALYKLPIIFVVENNLWAIGMSHLRATS 269
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD 240
DP+I+KKGPAFGMPG HVDGMDVLKVREVAKEA+ RARRGEGPTLVECETYRFRGHSLAD
Sbjct: 270 DPEIWKKGPAFGMPGVHVDGMDVLKVREVAKEAVTRARRGEGPTLVECETYRFRGHSLAD 329
Query: 241 PDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAP 300
PDELRD AEKA+YAARDPI ALKKYLIE+ LA EAELK+IEKKIDE+VE+AVEFAD S
Sbjct: 330 PDELRDAAEKAKYAARDPIAALKKYLIENKLAKEAELKSIEKKIDELVEEAVEFADASPQ 389
Query: 301 PPRSQLLENVFADPKGFGIGPDGRYRCEDPKFTEGTAHV 339
P RSQLLENVFADPKGFGIGPDGRYRCEDPKFTEGTA V
Sbjct: 390 PGRSQLLENVFADPKGFGIGPDGRYRCEDPKFTEGTAQV 428
>sp|Q7XTJ3|ODPA3_ORYSJ Pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic
OS=Oryza sativa subsp. japonica GN=Os04g0119400 PE=2
SV=2
Length = 425
Score = 624 bits (1610), Expect = e-178, Method: Compositional matrix adjust.
Identities = 298/341 (87%), Positives = 318/341 (93%), Gaps = 2/341 (0%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
M+LGR FEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLL + D VVSTYRDHVHALSK
Sbjct: 85 MVLGRIFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLNQADCVVSTYRDHVHALSK 144
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
GVPAR+VM+ELFGKATGCCRGQGGSMHMFS+ HNLLGGFAFIGEGIPVATGAAF +KYR
Sbjct: 145 GVPARSVMAELFGKATGCCRGQGGSMHMFSEPHNLLGGFAFIGEGIPVATGAAFAAKYRH 204
Query: 121 EVLKEADCD--HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRA 178
EVLK++ D VTLAFFGDGTCNNGQFFECLNMA LWKLPIVFVVENNLWAIGMSHLRA
Sbjct: 205 EVLKQSSPDGLDVTLAFFGDGTCNNGQFFECLNMAQLWKLPIVFVVENNLWAIGMSHLRA 264
Query: 179 TSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSL 238
TSDP+IYKKGPAFGMPG HVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSL
Sbjct: 265 TSDPEIYKKGPAFGMPGVHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSL 324
Query: 239 ADPDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADES 298
ADPDELR P EK+ YAARDPITALKKY+IE +LA+E+ELK+IEKKID+VVE+AVEFAD S
Sbjct: 325 ADPDELRRPDEKSHYAARDPITALKKYIIEQNLATESELKSIEKKIDDVVEEAVEFADAS 384
Query: 299 APPPRSQLLENVFADPKGFGIGPDGRYRCEDPKFTEGTAHV 339
PPRSQLLENVF+DPKGFGIGPDG+YRCEDP FT+GTA V
Sbjct: 385 PLPPRSQLLENVFSDPKGFGIGPDGKYRCEDPLFTQGTAQV 425
>sp|Q1XDM0|ODPA_PORYE Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra
yezoensis GN=pdhA PE=3 SV=1
Length = 346
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 212/313 (67%), Positives = 251/313 (80%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
M+LGR+FEDMCAQMYY+GKMFGFVHLYNGQEAVSTG IKLL D V STYRDHVHALSK
Sbjct: 33 MLLGRNFEDMCAQMYYKGKMFGFVHLYNGQEAVSTGVIKLLNPTDYVCSTYRDHVHALSK 92
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
GVP++ VM+ELFGK TGC +G+GGSMH+FS HN LGGFAFI EGIPVATGAAF S YR+
Sbjct: 93 GVPSKNVMAELFGKETGCSKGRGGSMHIFSAPHNFLGGFAFIAEGIPVATGAAFQSIYRQ 152
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
+VLKE + VT FFGDGT NNGQFFECLNMA LWKLPI+FVVENN WAIGM+H R++S
Sbjct: 153 QVLKETEDLRVTACFFGDGTTNNGQFFECLNMAVLWKLPIIFVVENNQWAIGMAHHRSSS 212
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD 240
P+I+KK AFG+PG VDGMDVL VR+ AK+A++RAR+G+GPTL+E TYRFRGHSLAD
Sbjct: 213 IPEIHKKAEAFGLPGIEVDGMDVLAVRQAAKQAVQRARQGDGPTLIEALTYRFRGHSLAD 272
Query: 241 PDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAP 300
PDELR EK + ARDPI LKKY++++ +A+ EL I+ + +E AV+FA S
Sbjct: 273 PDELRSRQEKEAWVARDPIKKLKKYILDNEIANIGELNEIQNAVKTELEQAVKFAISSPE 332
Query: 301 PPRSQLLENVFAD 313
P S+L +FAD
Sbjct: 333 PNMSELKRYLFAD 345
>sp|P51267|ODPA_PORPU Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra
purpurea GN=pdhA PE=3 SV=1
Length = 344
Score = 450 bits (1157), Expect = e-126, Method: Compositional matrix adjust.
Identities = 214/313 (68%), Positives = 252/313 (80%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
M+LGR+FEDMCAQMYY+GKMFGFVHLYNGQEAVSTG IKLL +D V STYRDHVHALSK
Sbjct: 31 MLLGRNFEDMCAQMYYKGKMFGFVHLYNGQEAVSTGVIKLLDSKDYVCSTYRDHVHALSK 90
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
GVP++ VM+ELFGK TGC RG+GGSMH+FS HN LGGFAFI EGIPVATGAAF S YR+
Sbjct: 91 GVPSQNVMAELFGKETGCSRGRGGSMHIFSAPHNFLGGFAFIAEGIPVATGAAFQSIYRQ 150
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
+VLKE VT FFGDGT NNGQFFECLNMA LWKLPI+FVVENN WAIGM+H R++S
Sbjct: 151 QVLKEPGELRVTACFFGDGTTNNGQFFECLNMAVLWKLPIIFVVENNQWAIGMAHHRSSS 210
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD 240
P+I+KK AFG+PG VDGMDVL VR+VA++A+ERAR+G+GPTL+E TYRFRGHSLAD
Sbjct: 211 IPEIHKKAEAFGLPGIEVDGMDVLAVRQVAEKAVERARQGQGPTLIEALTYRFRGHSLAD 270
Query: 241 PDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAP 300
PDELR EK + ARDPI LKK+++++ +AS EL I+ + +E +VEFA S
Sbjct: 271 PDELRSRQEKEAWVARDPIKKLKKHILDNQIASSDELNDIQSSVKIDLEQSVEFAMSSPE 330
Query: 301 PPRSQLLENVFAD 313
P S+L +FAD
Sbjct: 331 PNISELKRYLFAD 343
>sp|Q1RJX4|ODPA_RICBR Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia
bellii (strain RML369-C) GN=pdhA PE=3 SV=1
Length = 326
Score = 287 bits (734), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 200/312 (64%), Gaps = 7/312 (2%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
M+L R FE+ C Q+Y G++ GF HLY GQEAV + + +KEDS+V++YRDH H +
Sbjct: 22 MLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAVDMVKQKEDSMVTSYRDHAHIILA 81
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
G + V++EL G+ATGC +G+GGSMH+F + GG +G +P+ TG AF KY
Sbjct: 82 GTEPKYVLAELMGRATGCSKGKGGSMHLFDVPNKFYGGHGIVGAQVPIGTGLAFAEKYN- 140
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
+++ F GDG N GQ +E NMAALW LP+V+++ENN +++G S R+T
Sbjct: 141 ------GTNNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVARSTF 194
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD 240
+YKKG +FG+ GF ++GMD ++ + K+A E R P ++E +TYR+RGHS++D
Sbjct: 195 MRDLYKKGESFGIKGFQLNGMDFEEMYDGVKQAAEYVRENSMPLILEVKTYRYRGHSMSD 254
Query: 241 PDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAP 300
P + R E Y RDPIT ++K ++E++ ASEA+LK IE+ + E+V++AVEF++ S
Sbjct: 255 PAKYRSKEEVETYKERDPITEIRKIILENNYASEADLKEIEQSVKEIVKEAVEFSENSPL 314
Query: 301 PPRSQLLENVFA 312
P +L ++
Sbjct: 315 PNEEELYTQIYV 326
>sp|Q92IS3|ODPA_RICCN Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=pdhA PE=3
SV=1
Length = 326
Score = 283 bits (725), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 129/311 (41%), Positives = 199/311 (63%), Gaps = 7/311 (2%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
M+L R FE+ C Q+Y G++ GF HLY GQEAV + + +K DS +++YRDH H +
Sbjct: 22 MLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAIDMVKQKGDSTITSYRDHAHIILA 81
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
G + V++EL G+ATGC +G+GGSMH+F+ + GG +G +P+ TG AF KY
Sbjct: 82 GTEPKYVLAELMGRATGCSKGKGGSMHLFNVPNKFYGGHGIVGAQVPIGTGLAFVEKYN- 140
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
D ++ F GDG N GQ +E NMAALW LP+V+++ENN +++G S R+T
Sbjct: 141 ------DTHNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVARSTF 194
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD 240
+YKKG +FG+ GF +DGMD ++ + +K+A E R P ++E +TYR+RGHS++D
Sbjct: 195 MRDLYKKGASFGIKGFQLDGMDFEEMYDGSKQAAEYVRENSFPLILEVKTYRYRGHSMSD 254
Query: 241 PDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAP 300
P + R E +Y RDP+ ++K ++++ +EA+LKAIE+ + E+V++AVEF++ S
Sbjct: 255 PAKYRSKEEVEQYKERDPLVIIRKTILDNKYVTEADLKAIEQSVKEIVKEAVEFSENSPL 314
Query: 301 PPRSQLLENVF 311
P +L V+
Sbjct: 315 PDEGELYTQVY 325
>sp|Q4UKQ6|ODPA_RICFE Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia
felis (strain ATCC VR-1525 / URRWXCal2) GN=pdhA PE=3
SV=1
Length = 326
Score = 279 bits (713), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 128/311 (41%), Positives = 197/311 (63%), Gaps = 7/311 (2%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
M+L R FE+ C Q+Y G++ GF HLY GQEAV + + +K DS +++YRDH H +
Sbjct: 22 MLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAVDTVKQKGDSTITSYRDHAHIILA 81
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
G + V++EL G+ATGC +G+GGSMH+F + GG +G +P+ TG AF KY
Sbjct: 82 GTEPKYVLAELMGRATGCSKGKGGSMHLFDIPNKFYGGHGIVGAQVPIGTGLAFAEKYN- 140
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
+++ F GDG N GQ +E NMAALW LP+V+++ENN +++G S R+T
Sbjct: 141 ------GTNNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVARSTF 194
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD 240
+YKKG +FG+ GF +DGMD ++ AK+A E R P ++E +TYR+RGHS++D
Sbjct: 195 MRDLYKKGESFGIKGFQLDGMDFEEMYNGAKQAAEYVRENSFPLILEVKTYRYRGHSMSD 254
Query: 241 PDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAP 300
P + R E +Y RDP+ ++K ++++ A+EA+LK IE+ + E+V++AV+F++ S
Sbjct: 255 PAKYRSKEEVEQYKERDPLVIIRKTILDNKYATEADLKEIEQSVKEIVKEAVKFSENSPL 314
Query: 301 PPRSQLLENVF 311
P +L V+
Sbjct: 315 PDEGELYTEVY 325
>sp|Q9ZDR4|ODPA_RICPR Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia
prowazekii (strain Madrid E) GN=pdhA PE=3 SV=1
Length = 326
Score = 275 bits (704), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 126/312 (40%), Positives = 194/312 (62%), Gaps = 7/312 (2%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
M+L R FE+ C Q+Y GK+ GF HLY GQEAV + + KK DS +++YRDH H +
Sbjct: 22 MLLLRRFEEKCGQLYGMGKIGGFCHLYIGQEAVISAVAMIKKKGDSTITSYRDHAHIILA 81
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
G + V++EL G+ATGC +G+GGSMH+F + GG +G +P+ TG AF KY
Sbjct: 82 GTEPKYVLAELMGRATGCSKGKGGSMHLFDIPNKFYGGHGIVGAQVPIGTGLAFAEKYN- 140
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
+++ F GDG N GQ +E NMA+LW LPIV+++ENN +++G S R+T
Sbjct: 141 ------GTNNICFTFLGDGAVNQGQVYEAFNMASLWGLPIVYIIENNEYSMGTSVARSTF 194
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD 240
+YKKG +FG+ GF +DGMD ++ K+ E R P ++E +TYR+RGHS++D
Sbjct: 195 MCDLYKKGESFGIRGFQLDGMDFEEMYNGTKQVAEYVRENSFPVILEVKTYRYRGHSMSD 254
Query: 241 PDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAP 300
P + R E +Y RD + +++ ++++ A+EA+LKAIE+ + E+++ AVEF++ S
Sbjct: 255 PAKYRSKEEVEKYKERDTLVRIREIILDNKYATEADLKAIEQSVREIIKVAVEFSENSPL 314
Query: 301 PPRSQLLENVFA 312
P +L ++
Sbjct: 315 PAEDELYTEIYV 326
>sp|Q68XA9|ODPA_RICTY Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia
typhi (strain ATCC VR-144 / Wilmington) GN=pdhA PE=3
SV=1
Length = 326
Score = 275 bits (703), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 125/312 (40%), Positives = 195/312 (62%), Gaps = 7/312 (2%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
M+L R FE+ C Q+Y G++ GF HLY GQEAV + + KK DS +++YRDH H +
Sbjct: 22 MLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAVELIKKKGDSTITSYRDHAHIILA 81
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
G + V++EL G+ATGC +G+GGSMH+F + GG +G +P+ TG AF KY
Sbjct: 82 GTEPKYVLAELMGRATGCSKGKGGSMHLFDIPNKFYGGHGIVGAQVPIGTGLAFAEKYN- 140
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
+++ F GDG N GQ +E NMA+LW LP+V+++ENN +++G S R+T
Sbjct: 141 ------GTNNICFTFLGDGAVNQGQVYEAFNMASLWGLPVVYIIENNEYSMGTSVSRSTF 194
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD 240
+YKKG +FG+ GF +DGMD ++ K+ E R P ++E +TYR+RGHS++D
Sbjct: 195 MRDLYKKGESFGIRGFQLDGMDFEEMYNGTKQVAEYVRENSFPVILEVKTYRYRGHSMSD 254
Query: 241 PDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAP 300
P + R E A+Y RD + +++ ++++ A+E +LKAIE+ + EV++ AVEF++ S
Sbjct: 255 PAKYRSKEEVAKYKERDTLVRIRQIILDNKYATEEDLKAIERSVQEVIKVAVEFSENSPL 314
Query: 301 PPRSQLLENVFA 312
P +L +++
Sbjct: 315 PSEDELYTDIYV 326
>sp|Q9R9N5|ODPA_RHIME Pyruvate dehydrogenase E1 component subunit alpha OS=Rhizobium
meliloti (strain 1021) GN=pdhA PE=3 SV=1
Length = 348
Score = 271 bits (693), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 201/313 (64%), Gaps = 10/313 (3%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
M+L R FE+ Q+Y G + GF HLY GQEAV G LK+ D V++ YRDH H L+
Sbjct: 43 MLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQLALKEGDQVITGYRDHGHMLAC 102
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
G+ AR VM+EL G+ G +G+GGSMHMFSKE + GG +G + + TG AF ++YR
Sbjct: 103 GMSARGVMAELTGRRGGLSKGKGGSMHMFSKEKHFYGGHGIVGAQVSLGTGLAFANRYRG 162
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
D+V+LA+FGDG N GQ +E NMAALWKLP++++VENN +A+G S RA++
Sbjct: 163 N-------DNVSLAYFGDGAANQGQVYESFNMAALWKLPVIYIVENNRYAMGTSVSRASA 215
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD 240
++G +FG+PG+ VDGMDV V+ A EA+E R G+GP ++E TYR+RGHS++D
Sbjct: 216 QTDFSQRGASFGIPGYQVDGMDVRAVKAAADEAVEHCRSGKGPIILEMLTYRYRGHSMSD 275
Query: 241 PDELR--DPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADES 298
P + R D +K R + DPI +K L + A+E ELK I+K++ ++V D+ +FA
Sbjct: 276 PAKYRSKDEVQKMR-SEHDPIEQVKARLTDKGWATEDELKQIDKEVRDIVADSADFAQSD 334
Query: 299 APPPRSQLLENVF 311
P S+L ++
Sbjct: 335 PEPDVSELYTDIL 347
>sp|O66112|ODPA_ZYMMO Pyruvate dehydrogenase E1 component subunit alpha OS=Zymomonas
mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
GN=pdhA PE=3 SV=1
Length = 354
Score = 261 bits (668), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 134/313 (42%), Positives = 195/313 (62%), Gaps = 10/313 (3%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKK-EDSVVSTYRDHVHALS 59
M++ R FE+ C Q+Y G + GF HLY GQEAV+ G L+ DSV++ YR+H H L+
Sbjct: 46 MLMIRRFEERCGQLYGLGLIAGFCHLYIGQEAVAVGLQAALQPGRDSVITGYREHGHMLA 105
Query: 60 KGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYR 119
G+ + VM+EL G+A+G G+GGSMHMFS EH GG +G +P+ G AF KYR
Sbjct: 106 YGIDPKIVMAELTGRASGISHGKGGSMHMFSTEHKFFGGNGIVGAQVPLGAGLAFAHKYR 165
Query: 120 REVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRAT 179
+ C + A+FGDG+ N GQ +E NMAALWKLP++FV+ENN +A+G S RA
Sbjct: 166 ----NDGGC---SAAYFGDGSANQGQVYEAYNMAALWKLPVIFVIENNGYAMGTSIQRAN 218
Query: 180 SDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA 239
+ + ++G FG+P VDGMDVL+VR A A++ + G+GP ++E +TYR+RGHS++
Sbjct: 219 AHTALSERGAGFGIPALVVDGMDVLEVRGAATVAVDWVQAGKGPIILEMKTYRYRGHSMS 278
Query: 240 DPDELRDPAE-KARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADES 298
DP R E DP+ LKK L + + EAEL +++ I + V++A +FA+++
Sbjct: 279 DPARYRSREEVNDMKENHDPLDNLKKDLFAAGV-PEAELVKLDEDIRQQVKEAADFAEKA 337
Query: 299 APPPRSQLLENVF 311
P +L N+
Sbjct: 338 PLPADEELYTNIL 350
>sp|Q6Z5N4|ODPA1_ORYSJ Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os02g0739600 PE=2
SV=1
Length = 390
Score = 252 bits (644), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/324 (41%), Positives = 190/324 (58%), Gaps = 17/324 (5%)
Query: 9 DMCAQMYYRGKMF-GFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPARAV 67
++ A Y+ K+ GF HLY+GQEAV+ G + + DS+++ YRDH L++G +
Sbjct: 74 EIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITRSDSIITAYRDHCTYLARGGDLVSA 133
Query: 68 MSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD 127
+EL G+ GC RG+GGSMH + K+ N GG +G +P+ G AF KYR+E
Sbjct: 134 FAELMGRQAGCSRGKGGSMHFYKKDANFYGGHGIVGAQVPLGCGLAFAQKYRKE------ 187
Query: 128 CDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKK 187
+ T A +GDG N GQ FE LN++ALWKLP + V ENN + +G + RA P YK+
Sbjct: 188 -ETATFALYGDGAANQGQLFEALNISALWKLPAILVCENNHYGMGTAEWRAAKSPAYYKR 246
Query: 188 GPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDE---L 244
G +PG VDGMDVL V++ K A E A GP ++E +TYR+ GHS++DP
Sbjct: 247 GDY--VPGLKVDGMDVLAVKQACKFAKEHA-IANGPIVLEMDTYRYHGHSMSDPGSTYRT 303
Query: 245 RDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAPPPRS 304
RD R RDPI ++K ++ LA+ AELK +EK+I + V+DA+ A ES P S
Sbjct: 304 RDEISGVR-QERDPIERVRKLILAHDLATAAELKDMEKEIRKEVDDAIAKAKESPMPDTS 362
Query: 305 QLLENVFADPKGFGIGPDGRYRCE 328
+L NV+ KGFG+ G R E
Sbjct: 363 ELFTNVYV--KGFGVESFGADRKE 384
>sp|P52903|ODPA_SOLTU Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Solanum tuberosum PE=1 SV=1
Length = 391
Score = 247 bits (631), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 133/324 (41%), Positives = 188/324 (58%), Gaps = 17/324 (5%)
Query: 9 DMCAQMYYRGKMF-GFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPARAV 67
++ A Y+ K+ GF HLY+GQEAV+ G + K+D +++ YRDH L +G
Sbjct: 75 EIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDCIITAYRDHCIFLGRGGTLVEA 134
Query: 68 MSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD 127
+EL G+ GC RG+GGSMH + KE GG +G +P+ G AF KY++E
Sbjct: 135 FAELMGRRDGCSRGKGGSMHFYKKESGFYGGHGIVGAQVPLGIGLAFAQKYKKE------ 188
Query: 128 CDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKK 187
D+VT A +GDG N GQ FE LNMAALW LP + V ENN + +G + RA P YK+
Sbjct: 189 -DYVTFAMYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAKSPAYYKR 247
Query: 188 GPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDE---L 244
G +PG VDGMDV V++ A + A + GP ++E +TYR+ GHS++DP
Sbjct: 248 GDY--VPGLRVDGMDVFAVKQACTFAKQHALK-NGPIILEMDTYRYHGHSMSDPGSTYRT 304
Query: 245 RDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAPPPRS 304
RD R RDP+ ++ ++ ++A+EAELK IEK+ +VV++A+ A ES P S
Sbjct: 305 RDEISGVR-QERDPVERIRSLILAHNIATEAELKDIEKENRKVVDEAIAKAKESPMPDPS 363
Query: 305 QLLENVFADPKGFGIGPDGRYRCE 328
+L NV+ KGFG+ G R E
Sbjct: 364 ELFTNVYV--KGFGVEAYGADRKE 385
>sp|O31404|ACOA_BACSU Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha
OS=Bacillus subtilis (strain 168) GN=acoA PE=2 SV=2
Length = 333
Score = 247 bits (630), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 128/312 (41%), Positives = 189/312 (60%), Gaps = 10/312 (3%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
M+ R FED +++ +G + GFVHLY G+EAV+ G L DS+ ST+R H H ++K
Sbjct: 23 MLEIRGFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLHDGDSITSTHRGHGHCIAK 82
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
G +M+E+FGKATG C+G+GGSMH+ + +LG +G G +A G+A T+KY++
Sbjct: 83 GCDLDGMMAEIFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFTLACGSALTAKYKQ 142
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
+V++ FFGDG N G F E LN+AA+W LP+VFV ENN + A++
Sbjct: 143 -------TKNVSVCFFGDGANNQGTFHEGLNLAAVWNLPVVFVAENNGYGEATPFEYASA 195
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD 240
I + A+ MPG VDG D+L V + A+EAIERAR G GP+L+EC TYR GH D
Sbjct: 196 CDSIADRAAAYNMPGVTVDGKDILAVYQAAEEAIERARNGGGPSLIECMTYRNYGHFEGD 255
Query: 241 PDELRDPAEKARY-AARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESA 299
+ E+ + +D I K YL++ + A+ +L IE+++ E +E AV F+++S
Sbjct: 256 AQTYKTKDERVEHLEEKDAIQGFKNYLLKETDAN--KLSDIEQRVSESIEKAVSFSEDSP 313
Query: 300 PPPRSQLLENVF 311
P S+LL +V+
Sbjct: 314 YPKDSELLTDVY 325
>sp|P52901|ODPA1_ARATH Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial
OS=Arabidopsis thaliana GN=E1 ALPHA PE=1 SV=2
Length = 389
Score = 245 bits (626), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 136/329 (41%), Positives = 189/329 (57%), Gaps = 21/329 (6%)
Query: 1 MILGRSFEDMCAQMYYRGKMF-GFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALS 59
M L R E + A Y+ K+ GF HLY+GQEAV+ G + K+D++++ YRDH L
Sbjct: 66 MALMRRME-IAADSLYKAKLIRGFCHLYDGQEAVAIGMEAAITKKDAIITAYRDHCIFLG 124
Query: 60 KGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYR 119
+G V SEL G+ GC +G+GGSMH + KE + GG +G +P+ G AF KY
Sbjct: 125 RGGSLHEVFSELMGRQAGCSKGKGGSMHFYKKESSFYGGHGIVGAQVPLGCGIAFAQKYN 184
Query: 120 REVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRAT 179
+E + VT A +GDG N GQ FE LN++ALW LP + V ENN + +G + RA
Sbjct: 185 KE-------EAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTAEWRAA 237
Query: 180 SDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA 239
P YK+G +PG VDGMD V++ K A + A +GP ++E +TYR+ GHS++
Sbjct: 238 KSPSYYKRGDY--VPGLKVDGMDAFAVKQACKFAKQHALE-KGPIILEMDTYRYHGHSMS 294
Query: 240 DPDE---LRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFAD 296
DP RD R RDPI +KK ++ LA+E ELK +EK+I + V+DA+ A
Sbjct: 295 DPGSTYRTRDEISGVR-QERDPIERIKKLVLSHDLATEKELKDMEKEIRKEVDDAIAKAK 353
Query: 297 ESAPPPRSQLLENVFADPKGFG---IGPD 322
+ P S+L NV+ KGFG GPD
Sbjct: 354 DCPMPEPSELFTNVYV--KGFGTESFGPD 380
>sp|Q654V6|ODPA2_ORYSJ Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os06g0246500 PE=2
SV=1
Length = 398
Score = 245 bits (625), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 131/318 (41%), Positives = 186/318 (58%), Gaps = 18/318 (5%)
Query: 9 DMCAQMYYRGKMF-GFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPARAV 67
++ A Y+ K+ GF HLY+GQEAV+ G + D++++ YRDH L++G A+
Sbjct: 82 EIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAATTRADAIITAYRDHCAYLARGGDLAAL 141
Query: 68 MSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD 127
+EL G+ GC RG+GGSMH++ K+ N GG +G +P+ G AF +YR+E
Sbjct: 142 FAELMGRRGGCSRGKGGSMHLYKKDANFYGGHGIVGAQVPLGCGLAFAQRYRKEAA---- 197
Query: 128 CDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKK 187
VT +GDG N GQ FE LNMAALWKLP+V V ENN + +G + RA+ P YK+
Sbjct: 198 ---VTFDLYGDGAANQGQLFEALNMAALWKLPVVLVCENNHYGMGTAEWRASKSPAYYKR 254
Query: 188 GPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPD---EL 244
G +PG VDGMDVL V++ K A + A GP ++E +TYR+ GHS++DP
Sbjct: 255 GDY--VPGLKVDGMDVLAVKQACKFAKQHALE-NGPIILEMDTYRYHGHSMSDPGSTYRT 311
Query: 245 RDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAPPPRS 304
RD R RDPI ++K L+ A+ ELK +EK+I + V+ A+ A ES P S
Sbjct: 312 RDEIAGIR-QERDPIERVRKLLLAHDFATTQELKDMEKEIRKQVDTAIAKAKESPMPDPS 370
Query: 305 QLLENVFADPKG---FGI 319
+L NV+ + G FG+
Sbjct: 371 ELFTNVYVNDCGLESFGV 388
>sp|Q54C70|ODPA_DICDI Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Dictyostelium discoideum GN=pdhA PE=1 SV=1
Length = 377
Score = 243 bits (620), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/309 (39%), Positives = 179/309 (57%), Gaps = 13/309 (4%)
Query: 5 RSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPA 64
R E +C +Y + + GF HLY GQEAV G + K+D +++ YRDH + LS+G
Sbjct: 63 RRLETVCDGLYKKKLIRGFCHLYTGQEAVCAGLESAITKDDHIITAYRDHTYMLSRGATP 122
Query: 65 RAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLK 124
+ +EL K TGC +G+GGSMHMF+K N GG +G P+ G AF KY +
Sbjct: 123 EEIFAELLMKETGCSKGKGGSMHMFTK--NFYGGNGIVGAQCPLGAGIAFAQKYNK---- 176
Query: 125 EADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQI 184
+V LA +GDG N GQ FE NMA+LWKLP++F+ ENN + +G S R+T+
Sbjct: 177 ---TGNVCLAMYGDGAANQGQLFEAFNMASLWKLPVIFICENNKYGMGTSQKRSTAGHDF 233
Query: 185 YKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDEL 244
Y +G + G VDGMDV V+E K A E R G GP ++E +TYR+ GHS++DP
Sbjct: 234 YTRGHY--VAGLKVDGMDVFAVKEAGKYAAEWCRAGNGPIILEMDTYRYVGHSMSDPGIT 291
Query: 245 RDPAEKARYA--ARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAPPP 302
E+ + RDPI +++ ++++ +A+E +L AIE+ + + +E A E A + P
Sbjct: 292 YRTREEVNHVRQTRDPIENIRQIILDNKIATEDQLAAIEETVRDEMEKASEKAIAAPLPQ 351
Query: 303 RSQLLENVF 311
+L NV+
Sbjct: 352 ARELFTNVY 360
>sp|P52900|ODPA_SMIMA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
(Fragment) OS=Sminthopsis macroura GN=PDHA PE=2 SV=1
Length = 363
Score = 238 bits (607), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 126/314 (40%), Positives = 182/314 (57%), Gaps = 16/314 (5%)
Query: 5 RSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPA 64
R E Q+Y + + GF HLY+GQEA G + D V++ YR H ++G+P
Sbjct: 45 RRMELKADQLYKQKIIRGFCHLYDGQEACCMGLEAGINPTDHVITAYRAHGFTYTRGLPV 104
Query: 65 RAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLK 124
R +++EL G+ GC +G+GGSMHM++K N GG +G +P+ G A KY +
Sbjct: 105 REILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPLGVGIALACKYNEK--- 159
Query: 125 EADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQI 184
D + L +GDG N GQ FE NMAALWKLP +F+ ENN + +G S RA +
Sbjct: 160 ----DEICLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDY 215
Query: 185 YKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPD-- 242
YK+G +PG VDGMDVL VRE K A R G+GP L+E +TYR+ GHS++DP
Sbjct: 216 YKRGDF--IPGIMVDGMDVLCVREATKFAAAYCRSGKGPMLMELQTYRYHGHSMSDPGVS 273
Query: 243 -ELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAPP 301
R+ ++ R + DPI LK ++ ++LAS ELK I+ ++ + +EDA +FA P
Sbjct: 274 YRTREEIQEVR-SKSDPIMLLKDRMVNNNLASIEELKEIDVEVRKEIEDAAQFATADPEP 332
Query: 302 PRSQLLENVFA-DP 314
P +L ++++ DP
Sbjct: 333 PLEELGYHIYSRDP 346
>sp|P35486|ODPA_MOUSE Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Mus musculus GN=Pdha1 PE=1 SV=1
Length = 390
Score = 238 bits (606), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 126/314 (40%), Positives = 182/314 (57%), Gaps = 16/314 (5%)
Query: 5 RSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPA 64
R E Q+Y + + GF HL +GQEA G + D +++ YR H ++G+P
Sbjct: 72 RRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLPV 131
Query: 65 RAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLK 124
RA+++EL G+ GC +G+GGSMHM++K N GG +G +P+ G A KY +
Sbjct: 132 RAILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPLGAGIALACKYNGK--- 186
Query: 125 EADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQI 184
D V L +GDG N GQ FE NMAALWKLP +F+ ENN + +G S RA +
Sbjct: 187 ----DEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDY 242
Query: 185 YKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPD-- 242
YK+G +PG VDGMD+L VRE K A R G+GP L+E +TYR+ GHS++DP
Sbjct: 243 YKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVS 300
Query: 243 -ELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAPP 301
R+ ++ R + DPI LK ++ S+LAS ELK I+ ++ + +EDA +FA P
Sbjct: 301 YRTREEIQEVR-SKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 359
Query: 302 PRSQLLENVF-ADP 314
P +L +++ +DP
Sbjct: 360 PLEELGYHIYSSDP 373
>sp|Q8H1Y0|ODPA2_ARATH Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial
OS=Arabidopsis thaliana GN=IAR4 PE=1 SV=2
Length = 393
Score = 236 bits (602), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/307 (40%), Positives = 181/307 (58%), Gaps = 15/307 (4%)
Query: 9 DMCAQMYYRGKMF-GFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPARAV 67
++ A Y+ K+ GF HLY+GQEA++ G + K+D+++++YRDH + +G
Sbjct: 77 EIAADSLYKAKLIRGFCHLYDGQEALAVGMEAAITKKDAIITSYRDHCTFIGRGGKLVDA 136
Query: 68 MSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD 127
SEL G+ TGC G+GGSMH + K+ + GG +G IP+ G AF KY ++
Sbjct: 137 FSELMGRKTGCSHGKGGSMHFYKKDASFYGGHGIVGAQIPLGCGLAFAQKYNKD------ 190
Query: 128 CDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKK 187
+ VT A +GDG N GQ FE LN++ALW LP + V ENN + +G + R+ P +K+
Sbjct: 191 -EAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTATWRSAKSPAYFKR 249
Query: 188 GPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDE---L 244
G +PG VDGMD L V++ K A E A + GP ++E +TYR+ GHS++DP
Sbjct: 250 GDY--VPGLKVDGMDALAVKQACKFAKEHALK-NGPIILEMDTYRYHGHSMSDPGSTYRT 306
Query: 245 RDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAPPPRS 304
RD R RDPI ++K L+ +A+E ELK +EK+I + V+DAV A ES P S
Sbjct: 307 RDEISGVR-QVRDPIERVRKLLLTHDIATEKELKDMEKEIRKEVDDAVAQAKESPIPDAS 365
Query: 305 QLLENVF 311
+L N++
Sbjct: 366 ELFTNMY 372
>sp|P29803|ODPAT_HUMAN Pyruvate dehydrogenase E1 component subunit alpha, testis-specific
form, mitochondrial OS=Homo sapiens GN=PDHA2 PE=1 SV=1
Length = 388
Score = 234 bits (597), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 124/322 (38%), Positives = 182/322 (56%), Gaps = 15/322 (4%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
M+ R E Q+Y + + GF HL +GQEA G + D V+++YR H ++
Sbjct: 66 MLTVRRMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVITSYRAHGVCYTR 125
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
G+ R++++EL G+ GC +G+GGSMHM++K N GG +G P+ G A KY+
Sbjct: 126 GLSVRSILAELTGRRGGCAKGKGGSMHMYTK--NFYGGNGIVGAQGPLGAGIALACKYKG 183
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
D + L +GDG N GQ E NMAALWKLP VF+ ENNL+ +G S RA +
Sbjct: 184 N-------DEICLTLYGDGAANQGQIAEAFNMAALWKLPCVFICENNLYGMGTSTERAAA 236
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD 240
P YK+G +PG VDGMDVL VRE K A R G+GP L+E +TYR+ GHS++D
Sbjct: 237 SPDYYKRGNF--IPGLKVDGMDVLCVREATKFAANYCRSGKGPILMELQTYRYHGHSMSD 294
Query: 241 PD---ELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADE 297
P R+ ++ R + RDPI L+ ++ S LA+ ELK I ++ + ++DA +FA
Sbjct: 295 PGVSYRTREEIQEVR-SKRDPIIILQDRMVNSKLATVEELKEIGAEVRKEIDDAAQFATT 353
Query: 298 SAPPPRSQLLENVFADPKGFGI 319
P +L ++++ F +
Sbjct: 354 DPEPHLEELGHHIYSSDSSFEV 375
>sp|A7MB35|ODPA_BOVIN Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Bos taurus GN=PDHA1 PE=2 SV=1
Length = 390
Score = 232 bits (592), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/318 (38%), Positives = 180/318 (56%), Gaps = 15/318 (4%)
Query: 5 RSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPA 64
R E Q+Y + + GF HL +GQEA G + D +++ YR H ++G+
Sbjct: 72 RRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSV 131
Query: 65 RAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLK 124
R +++EL G+ GC +G+GGSMHM++K N GG +G +P+ G A KY +
Sbjct: 132 REILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPLGAGIALACKYNGK--- 186
Query: 125 EADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQI 184
D V L +GDG N GQ FE NMAALWKLP +F+ ENN + +G S RA +
Sbjct: 187 ----DEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDY 242
Query: 185 YKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPD-- 242
YK+G +PG VDGMD+L VRE K A R G+GP L+E +TYR+ GHS++DP
Sbjct: 243 YKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVS 300
Query: 243 -ELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAPP 301
R+ ++ R + DPI LK ++ S+LAS ELK I+ ++ + +EDA +FA P
Sbjct: 301 YRTREEIQEVR-SKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 359
Query: 302 PRSQLLENVFADPKGFGI 319
P +L +++ + F +
Sbjct: 360 PLEELGYHIYCNDPPFEV 377
>sp|P26284|ODPA_RAT Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Rattus norvegicus GN=Pdha1 PE=1 SV=2
Length = 390
Score = 232 bits (592), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/314 (39%), Positives = 180/314 (57%), Gaps = 16/314 (5%)
Query: 5 RSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPA 64
R E Q+Y + + GF HL +GQEA G + D +++ YR H ++G
Sbjct: 72 RRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFNRGHAV 131
Query: 65 RAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLK 124
RA+++EL G+ GC +G+GGSMHM++K N GG +G +P+ G A KY +
Sbjct: 132 RAILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPLGAGIALACKYNGK--- 186
Query: 125 EADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQI 184
D V L +GDG N GQ FE NMAALWKLP +F+ ENN + +G S RA +
Sbjct: 187 ----DEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDY 242
Query: 185 YKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPD-- 242
YK+G +PG VDGMD+L VRE K A R G+GP L+E +TYR+ GHS++DP
Sbjct: 243 YKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVS 300
Query: 243 -ELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAPP 301
R+ ++ R + DPI LK ++ S+LAS ELK I+ ++ + +EDA +FA P
Sbjct: 301 YRTREEIQEVR-SKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 359
Query: 302 PRSQLLENVF-ADP 314
P +L +++ +DP
Sbjct: 360 PLEELGYHIYSSDP 373
>sp|P52902|ODPA_PEA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Pisum sativum PE=2 SV=1
Length = 397
Score = 232 bits (591), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/322 (38%), Positives = 181/322 (56%), Gaps = 16/322 (4%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
M L R E +Y + GF HLY+GQEAV+ G K+D +++ YRDH L +
Sbjct: 74 MALMRRMEIAADSLYKANLIRGFCHLYDGQEAVAVGMEAGTTKKDCIITAYRDHCTFLGR 133
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
G V +EL G+ GC +G+GGSMH + K+ GG +G +P+ G AF KY +
Sbjct: 134 GGTLLRVYAELMGRRDGCSKGKGGSMHFYKKDSGFYGGHGIVGAQVPLGCGLAFGQKYLK 193
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
+ + VT A +GDG N GQ FE LN++ALW LP + V ENN + +G + R+
Sbjct: 194 D-------ESVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTATWRSAK 246
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD 240
P +K+G +PG VDGMD L V++ K A E A + GP ++E +TYR+ GHS++D
Sbjct: 247 SPAYFKRGDY--VPGLKVDGMDALAVKQACKFAKEHALK-NGPIILEMDTYRYHGHSMSD 303
Query: 241 PDE---LRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADE 297
P RD R RDPI ++K L+ +A+E ELK EK++ + V++A+ A +
Sbjct: 304 PGSTYRTRDEISGVR-QERDPIERVRKLLLSHDIATEKELKDTEKEVRKEVDEAIAKAKD 362
Query: 298 SAPPPRSQLLENVFADPKGFGI 319
S P S L NV+ KG+G+
Sbjct: 363 SPMPDPSDLFSNVYV--KGYGV 382
>sp|P16387|ODPA_YEAST Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PDA1 PE=1 SV=2
Length = 420
Score = 225 bits (573), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 120/317 (37%), Positives = 185/317 (58%), Gaps = 19/317 (5%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
M++ R E C +Y K+ GF HL GQEA++ G + K DS++++YR H +
Sbjct: 88 MVIIRRMEMACDALYKAKKIRGFCHLSVGQEAIAVGIENAITKLDSIITSYRCHGFTFMR 147
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
G +AV++EL G+ G G+GGSMH+++ GG +G +P+ G AF +Y+
Sbjct: 148 GASVKAVLAELMGRRAGVSYGKGGSMHLYAP--GFYGGNGIVGAQVPLGAGLAFAHQYKN 205
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
E D + +GDG N GQ FE NMA LW LP+VF ENN + +G + R+++
Sbjct: 206 E-------DACSFTLYGDGASNQGQVFESFNMAKLWNLPVVFCCENNKYGMGTAASRSSA 258
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD 240
+ +K+G +PG V+GMD+L V + +K A + G+GP ++E ETYR+ GHS++D
Sbjct: 259 MTEYFKRGQY--IPGLKVNGMDILAVYQASKFAKDWCLSGKGPLVLEYETYRYGGHSMSD 316
Query: 241 PD---ELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADE 297
P RD + R + DPI LK +LI+ +A+EAE+KA +K + V++ VE AD
Sbjct: 317 PGTTYRTRDEIQHMR-SKNDPIAGLKMHLIDLGIATEAEVKAYDKSARKYVDEQVELAD- 374
Query: 298 SAPPPRSQ---LLENVF 311
+APPP ++ L E+V+
Sbjct: 375 AAPPPEAKLSILFEDVY 391
>sp|Q10489|ODPA_SCHPO Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pda1 PE=1 SV=1
Length = 409
Score = 224 bits (570), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 125/316 (39%), Positives = 184/316 (58%), Gaps = 17/316 (5%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
M+ R E C +Y K+ GF HL GQEAV+ G + +DS++++YR H A ++
Sbjct: 85 MVTIRRLELACDALYKAKKIRGFCHLSIGQEAVAAGIEGAITLDDSIITSYRCHGFAYTR 144
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
G+ R+++ EL G+ G +G+GGSMH+F+K N GG +G IP+ G F KY
Sbjct: 145 GLSIRSIIGELMGRQCGASKGKGGSMHIFAK--NFYGGNGIVGAQIPLGAGIGFAQKYLE 202
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
+ T A +GDG N GQ FE NMA LW LP++F ENN + +G S R+++
Sbjct: 203 K-------PTTTFALYGDGASNQGQAFEAFNMAKLWGLPVIFACENNKYGMGTSAERSSA 255
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD 240
+ YK+G +PG V+GMDVL V + +K A + P L+E TYR+ GHS++D
Sbjct: 256 MTEFYKRGQY--IPGLLVNGMDVLAVLQASKFAKKYTVENSQPLLMEFVTYRYGGHSMSD 313
Query: 241 PDEL---RDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADE 297
P R+ +K R AARDPI LKK+++E +A+ ELK IEK+I +V++ V A+E
Sbjct: 314 PGTTYRSREEVQKVR-AARDPIEGLKKHIMEWGVANANELKNIEKRIRGMVDEEVRIAEE 372
Query: 298 SAPPPRSQLLENVFAD 313
S P + E++F+D
Sbjct: 373 SPFP--DPIEESLFSD 386
>sp|P52899|ODPA_CAEEL Probable pyruvate dehydrogenase E1 component subunit alpha,
mitochondrial OS=Caenorhabditis elegans GN=T05H10.6 PE=2
SV=1
Length = 397
Score = 224 bits (570), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 120/314 (38%), Positives = 176/314 (56%), Gaps = 15/314 (4%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
M + R E +Y K+ GF HLY+GQEA + G + + D+V++ YR H
Sbjct: 62 MQVIRRMESAAGNLYKEKKIRGFCHLYSGQEACAVGMKAAMTEGDAVITAYRCHGWTWLL 121
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
G V++EL G+ G G+GGSMHM++K N GG +G P+ G A KYR
Sbjct: 122 GATVTEVLAELTGRVAGNVHGKGGSMHMYTK--NFYGGNGIVGAQQPLGAGVALAMKYRE 179
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
+ +V + +GDG N GQ FE NMA LW LP++FV ENN + +G + R+++
Sbjct: 180 Q-------KNVCVTLYGDGAANQGQLFEATNMAKLWDLPVLFVCENNGFGMGTTAERSSA 232
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD 240
+ Y +G +PG VDGMD+L VRE K A E G+GP ++E TYR+ GHS++D
Sbjct: 233 STEYYTRGDY--VPGIWVDGMDILAVREATKWAKEYCDSGKGPLMMEMATYRYHGHSMSD 290
Query: 241 PD---ELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADE 297
P R+ ++ R RDPIT K +I SSLA+E ELKAI+K++ + V++A++ A
Sbjct: 291 PGTSYRTREEIQEVR-KTRDPITGFKDRIITSSLATEEELKAIDKEVRKEVDEALKIATS 349
Query: 298 SAPPPRSQLLENVF 311
P L +++
Sbjct: 350 DGVLPPEALYADIY 363
>sp|P26268|ODPT_ASCSU Pyruvate dehydrogenase E1 component subunit alpha type II,
mitochondrial (Fragment) OS=Ascaris suum PE=2 SV=1
Length = 391
Score = 221 bits (564), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 116/310 (37%), Positives = 174/310 (56%), Gaps = 15/310 (4%)
Query: 5 RSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPA 64
R E +Y K+ GF HLY+GQEA + G ++ D+ ++ YR H G P
Sbjct: 63 RRMETAAGNLYKEKKVRGFCHLYSGQEACAVGMKAAMEPGDAAITAYRCHGWTYLSGSPV 122
Query: 65 RAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLK 124
V+ EL G+ TG G+GGSMHM+ + N GG +G P+ TG AF KY+++
Sbjct: 123 AKVLCELTGRITGNVYGKGGSMHMYGE--NFYGGNGIVGAQQPLGTGIAFAMKYKKQ--- 177
Query: 125 EADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQI 184
+V + FGDG N GQ +E +NMA LW+LP+++V ENN + +G S R+++
Sbjct: 178 ----KNVCITLFGDGATNQGQLYESMNMAKLWELPVLYVCENNGYGMGTSAARSSASTDY 233
Query: 185 YKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPD-- 242
Y +G +PGF VDGMDVL VR+ + E G+GP ++E TYR+ GHS++DP
Sbjct: 234 YTRGDY--VPGFWVDGMDVLAVRQAIRWGKEWCNAGKGPLMIEMATYRYGGHSMSDPGTS 291
Query: 243 -ELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAPP 301
R+ ++ R RDPIT K ++ + L +E ELK ++K+I + V+ AV+ A
Sbjct: 292 YRTREEIQEVR-KTRDPITGFKDKIVTAGLVTEDELKEVDKEIRKEVDAAVKQAHTDKEA 350
Query: 302 PRSQLLENVF 311
P LL +++
Sbjct: 351 PVEMLLTDIY 360
>sp|O13366|ODPA_KLULA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PDA1 PE=3
SV=2
Length = 412
Score = 219 bits (558), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/317 (37%), Positives = 182/317 (57%), Gaps = 19/317 (5%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
MI+ R E C +Y K+ GF H GQEA++ G + K D+V+++YR H +
Sbjct: 80 MIIVRRMEMACDALYKAKKIRGFCHSSVGQEAIAVGIENAITKRDTVITSYRCHGFTYMR 139
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
G +AV++EL G+ TG G+GGSMH+++ GG +G +P+ G AF +Y+
Sbjct: 140 GAAVQAVLAELMGRRTGVSFGKGGSMHLYAP--GFYGGNGIVGAQVPLGAGLAFAHQYKH 197
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
E D + A +GDG N GQ FE NMA LW LP VF ENN + +G + R+++
Sbjct: 198 E-------DACSFALYGDGASNQGQVFESFNMAKLWNLPAVFCCENNKYGMGTAAARSSA 250
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD 240
+ +K+G +PG V+GMD+L V + +K A + G GP ++E ETYR+ GHS++D
Sbjct: 251 MTEYFKRGQY--IPGLKVNGMDILAVYQASKFAKDWTVSGNGPIVLEYETYRYGGHSMSD 308
Query: 241 PD---ELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADE 297
P RD + R + DPI LK +L+E +A+E E+KA +K + V++ VE AD
Sbjct: 309 PGTTYRTRDEIQHMR-SKNDPIAGLKMHLLELGIATEDEIKAYDKAARKYVDEQVELAD- 366
Query: 298 SAPPPRSQ---LLENVF 311
+AP P ++ L E+V+
Sbjct: 367 AAPAPEAKMSILFEDVY 383
>sp|P26267|ODPA_ASCSU Pyruvate dehydrogenase E1 component subunit alpha type I,
mitochondrial OS=Ascaris suum PE=1 SV=1
Length = 396
Score = 219 bits (557), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/314 (36%), Positives = 173/314 (55%), Gaps = 15/314 (4%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
M+ R E +Y K+ GF HLY+GQEA + G + D+ V+ YR H
Sbjct: 64 MLTIRRMESAAGNLYKEKKVRGFCHLYSGQEACAVGTKAAMDAGDAAVTAYRCHGWTYLS 123
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
G V+ EL G+ TG G+GGSMHM+ + N GG +G P+ TG AF KYR+
Sbjct: 124 GSSVAKVLCELTGRITGNVYGKGGSMHMYGE--NFYGGNGIVGAQQPLGTGIAFAMKYRK 181
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
E +V + FGDG N GQ FE +NMA LW LP+++V ENN + +G + R+++
Sbjct: 182 E-------KNVCITMFGDGATNQGQLFESMNMAKLWDLPVLYVCENNGYGMGTAAARSSA 234
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD 240
Y +G +PG VDGMDVL VR+ + A E G+GP ++E TYR+ GHS++D
Sbjct: 235 STDYYTRGDY--VPGIWVDGMDVLAVRQAVRWAKEWCNAGKGPLMIEMATYRYSGHSMSD 292
Query: 241 PD---ELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADE 297
P R+ ++ R RDPIT K ++ + L +E E+K I+K++ + ++ AV+ A
Sbjct: 293 PGTSYRTREEVQEVR-KTRDPITGFKDKIVTAGLVTEDEIKEIDKQVRKEIDAAVKQAHT 351
Query: 298 SAPPPRSQLLENVF 311
P +L +++
Sbjct: 352 DKESPVELMLTDIY 365
>sp|P27745|ACOA_CUPNH Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha
OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier 337) GN=acoA PE=1 SV=3
Length = 333
Score = 213 bits (543), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/308 (36%), Positives = 165/308 (53%), Gaps = 8/308 (2%)
Query: 5 RSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPA 64
R FE+ + RG + GFVHLY G+EA G + L D + ST+R H H ++KGV
Sbjct: 30 RDFEERLHVDFGRGDIPGFVHLYAGEEAAGVGILHHLNDGDRIASTHRGHGHCIAKGVDP 89
Query: 65 RAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLK 124
A+M E++GK G C G+GGSMH+ ++G +G G P+ GAA +K+R +
Sbjct: 90 VAMMKEIYGKKGGSCNGKGGSMHIADLSKGMMGANGILGAGAPLICGAALAAKFRGK--- 146
Query: 125 EADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQI 184
V + F GDG N G F E LN+AA+W LP++FV+ENN +A S T+
Sbjct: 147 ----GEVGITFCGDGASNQGTFLESLNLAAVWNLPVIFVIENNGYAESTSRDYGTAVDSY 202
Query: 185 YKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDEL 244
+ FG+PG VDG D V E A E I RAR G GP+L+EC+ RF GH D
Sbjct: 203 VDRAAGFGIPGVTVDGTDFFAVHEAAGEVIRRAREGGGPSLLECKMVRFYGHFEGDAQTY 262
Query: 245 RDPAEKARY-AARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAPPPR 303
R E A +D + + + ++ + + EL I++++ ++E AV+ A + P
Sbjct: 263 RAAGELDDIRANKDCLKLFGRAVTQAGVVAREELDTIDREVAALIEHAVQEAKAAPQPGP 322
Query: 304 SQLLENVF 311
LL +V+
Sbjct: 323 EDLLTDVY 330
>sp|P29804|ODPA_PIG Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial (Fragment) OS=Sus scrofa GN=PDHA1 PE=1
SV=1
Length = 389
Score = 211 bits (538), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 123/318 (38%), Positives = 180/318 (56%), Gaps = 15/318 (4%)
Query: 5 RSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPA 64
R E Q+Y + + GF HL +GQEA G + D +++ YR H ++G+
Sbjct: 71 RRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSV 130
Query: 65 RAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLK 124
R +++EL G+ GC +G+GGSMHM++K N GG +G +P+ G A KY +
Sbjct: 131 REILAELTGRRGGCGKGKGGSMHMYAK--NFYGGNGIVGAQVPLGAGIALACKYNGK--- 185
Query: 125 EADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQI 184
D V L +GDG N GQ FE NMAALWKLP VF+ ENN + +G S RA +
Sbjct: 186 ----DEVCLTLYGDGAANQGQIFEAYNMAALWKLPCVFICENNRYGMGTSVERAAASTDY 241
Query: 185 YKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPD-- 242
YK+G +PG VDGMD+L VRE + A R G+GP L+E +TYR+ GHS++DP
Sbjct: 242 YKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVS 299
Query: 243 -ELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAPP 301
R+ ++ R + DPI LK ++ S+LAS ELK I+ ++ + +EDA +FA P
Sbjct: 300 YRTREEIQEVR-SKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 358
Query: 302 PRSQLLENVFADPKGFGI 319
P +L +++ + F +
Sbjct: 359 PLEELGYHIYCNDPPFEV 376
>sp|P08559|ODPA_HUMAN Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Homo sapiens GN=PDHA1 PE=1 SV=3
Length = 390
Score = 211 bits (536), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 123/314 (39%), Positives = 180/314 (57%), Gaps = 16/314 (5%)
Query: 5 RSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPA 64
R E Q+Y + + GF HL +GQEA G + D +++ YR H ++G+
Sbjct: 72 RRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSV 131
Query: 65 RAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLK 124
R +++EL G+ GC +G+GGSMHM++K N GG +G +P+ G A KY +
Sbjct: 132 REILAELTGRKGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPLGAGIALACKYNGK--- 186
Query: 125 EADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQI 184
D V L +GDG N GQ FE NMAALWKLP +F+ ENN + +G S RA +
Sbjct: 187 ----DEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDY 242
Query: 185 YKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPD-- 242
YK+G +PG VDGMD+L VRE + A R G+GP L+E +TYR+ GHS++DP
Sbjct: 243 YKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVS 300
Query: 243 -ELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAPP 301
R+ ++ R + DPI LK ++ S+LAS ELK I+ ++ + +EDA +FA P
Sbjct: 301 YRTREEIQEVR-SKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 359
Query: 302 PRSQLLENVF-ADP 314
P +L +++ +DP
Sbjct: 360 PLEELGYHIYSSDP 373
>sp|Q5R490|ODPA_PONAB Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Pongo abelii GN=PDHA1 PE=2 SV=1
Length = 390
Score = 208 bits (529), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 122/314 (38%), Positives = 179/314 (57%), Gaps = 16/314 (5%)
Query: 5 RSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPA 64
R E Q+Y + + GF HL +GQEA G + D +++ YR H ++G+
Sbjct: 72 RRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSV 131
Query: 65 RAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLK 124
R +++EL G+ GC +G+GGSMHM++K N GG +G +P+ G A KY +
Sbjct: 132 REILAELTGRKGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPLGAGIALACKYNGK--- 186
Query: 125 EADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQI 184
D V L +GDG N GQ F NMAALWKLP +F+ ENN + +G S RA +
Sbjct: 187 ----DEVCLTLYGDGAANQGQIFGAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDY 242
Query: 185 YKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPD-- 242
YK+G +PG VDGMD+L VRE + A R G+GP L+E +TYR+ GHS++DP
Sbjct: 243 YKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVS 300
Query: 243 -ELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAPP 301
R+ ++ R + DPI LK ++ S+LAS ELK I+ ++ + +EDA +FA P
Sbjct: 301 YRTREEIQEVR-SKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 359
Query: 302 PRSQLLENVF-ADP 314
P +L +++ +DP
Sbjct: 360 PLEELGYHIYSSDP 373
>sp|A5A6L0|ODPA_PANTR Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Pan troglodytes GN=PDHA1 PE=2 SV=1
Length = 390
Score = 208 bits (529), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 122/314 (38%), Positives = 179/314 (57%), Gaps = 16/314 (5%)
Query: 5 RSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPA 64
R E Q+Y + + GF HL +GQEA G + D +++ YR H ++G+
Sbjct: 72 RRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSV 131
Query: 65 RAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLK 124
R +++EL G+ GC +G+GGSMHM++K N GG +G +P+ G A KY +
Sbjct: 132 REILAELTGRKGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPLGAGIALACKYNGK--- 186
Query: 125 EADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQI 184
D V L +GDG N GQ FE NMAALWKLP +F+ ENN + +G S RA +
Sbjct: 187 ----DEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDY 242
Query: 185 YKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPD-- 242
YK+G +PG VDGMD+L VRE + A R G+GP L+E +TYR+ GHS++ P
Sbjct: 243 YKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSGPGVS 300
Query: 243 -ELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAPP 301
R+ ++ R + DPI LK ++ S+LAS ELK I+ ++ + +EDA +FA P
Sbjct: 301 YRTREEIQEVR-SKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 359
Query: 302 PRSQLLENVF-ADP 314
P +L +++ +DP
Sbjct: 360 PLEELGYHIYSSDP 373
>sp|P35487|ODPAT_MOUSE Pyruvate dehydrogenase E1 component subunit alpha, testis-specific
form, mitochondrial OS=Mus musculus GN=Pdha2 PE=2 SV=1
Length = 391
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 177/304 (58%), Gaps = 15/304 (4%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
M + R E Q+Y + + GF HL +GQEA G + D V+++YR H ++
Sbjct: 69 MQVIRRMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPTDHVITSYRAHGFCYTR 128
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
G+ +++++EL G+ GC +G+GGSMHM+ K N GG +G +P+ G AF KY +
Sbjct: 129 GLSVKSILAELTGRKGGCAKGKGGSMHMYGK--NFYGGNGIVGAQVPLGAGVAFACKYLK 186
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
V LA +GDG N GQ FE NM+ALWKLP VF+ ENNL+ +G S+ R+ +
Sbjct: 187 N-------GQVCLALYGDGAANQGQVFEAYNMSALWKLPCVFICENNLYGMGTSNERSAA 239
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD 240
+KKG F +PG V+GMD+L VRE K A + R G+GP ++E +TYR+ GHS++D
Sbjct: 240 STDYHKKG--FIIPGLRVNGMDILCVREATKFAADHCRSGKGPIVMELQTYRYHGHSMSD 297
Query: 241 PD---ELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADE 297
P R+ R + DPI L++ +I ++L++ ELK I+ + + VEDA +FA
Sbjct: 298 PGISYRSREEVHNVR-SKSDPIMLLRERIISNNLSNIEELKEIDADVKKEVEDAAQFATT 356
Query: 298 SAPP 301
P
Sbjct: 357 DPEP 360
>sp|Q06437|ODPAT_RAT Pyruvate dehydrogenase E1 component subunit alpha, testis-specific
form, mitochondrial OS=Rattus norvegicus GN=Pdha2 PE=1
SV=1
Length = 391
Score = 206 bits (524), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/314 (36%), Positives = 181/314 (57%), Gaps = 15/314 (4%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
M + R E Q+Y + + GF HL +GQEA + G + D ++++YR H ++
Sbjct: 69 MQVIRRMELKADQLYKQKFIRGFCHLCDGQEACNVGLEAGINPTDHIITSYRAHGLCYTR 128
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
G+ +++++EL G+ GC +G+GGSMHM++K N GG +G +P+ G A KY +
Sbjct: 129 GLSVKSILAELTGRKGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPLGAGVALACKYLK 186
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
+ LA +GDG N GQ FE NM+ALWKLP VF+ ENN + +G + R+ +
Sbjct: 187 N-------GQICLALYGDGAANQGQVFEAYNMSALWKLPCVFICENNRYGMGTAIERSAA 239
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD 240
+KKG F +PG V+GMD+L VRE K A + R G+GP ++E +TYR+ GHS++D
Sbjct: 240 STDYHKKG--FVIPGLRVNGMDILSVREATKFAADHCRSGKGPIVMELQTYRYHGHSMSD 297
Query: 241 PD---ELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADE 297
P R+ + R + DPI L++ +I ++L+S ELK I+ + + VE+A +FA
Sbjct: 298 PGISYRTREEVQNVR-SKSDPIMLLRERMISNNLSSVEELKEIDADVKKEVEEAAQFATT 356
Query: 298 SAPPPRSQLLENVF 311
PP L ++
Sbjct: 357 DPEPPLEDLANYLY 370
>sp|Q8HXW9|ODPA_MACFA Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Macaca fascicularis GN=PDHA1 PE=2 SV=1
Length = 390
Score = 203 bits (517), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/314 (38%), Positives = 178/314 (56%), Gaps = 16/314 (5%)
Query: 5 RSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPA 64
R E Q+Y + + GF HL +GQEA G + D +++ YR H ++G+
Sbjct: 72 RRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSV 131
Query: 65 RAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLK 124
R +++EL G+ GC +G+GGS HM++K N G +G +P+ G A KY +
Sbjct: 132 REILAELTGRKGGCAKGKGGSTHMYAK--NFYRGNGIVGAQVPLGAGIALACKYNGK--- 186
Query: 125 EADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQI 184
D V L +GDG + GQ FE NMAALWKLP +F+ ENN + +G S RA +
Sbjct: 187 ----DEVCLTLYGDGAADQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDY 242
Query: 185 YKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPD-- 242
YK+G +PG VDGMD+L VRE + A R G+GP L+E +TYR+ GHS++DP
Sbjct: 243 YKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVS 300
Query: 243 -ELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAPP 301
R+ ++ R + DPI LK ++ S+LAS ELK I+ ++ + +EDA +FA P
Sbjct: 301 YRTREEIQEVR-SKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 359
Query: 302 PRSQLLENVF-ADP 314
P +L +++ +DP
Sbjct: 360 PLEELGYHIYSSDP 373
>sp|Q5SLR4|ODBA_THET8 2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
GN=TTHA0229 PE=1 SV=1
Length = 367
Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 159/315 (50%), Gaps = 10/315 (3%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKE-DSVVSTYRDHVHALS 59
M+ R ++ + GK F+ G EA ++ D V YRDH AL+
Sbjct: 45 MLAARMLDERYTILIRTGKT-SFIAPAAGHEAAQVAIAHAIRPGFDWVFPYYRDHGLALA 103
Query: 60 KGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYR 119
G+P + ++ ++ +G+ H SK N + I +P A GAA + K
Sbjct: 104 LGIPLKELLGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISMKLL 163
Query: 120 REVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRAT 179
R V + FGDG + G ++ +N AA+ P VF+ ENN +AI + + T
Sbjct: 164 R-------TGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFIAENNFYAISVDYRHQT 216
Query: 180 SDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA 239
P I K AFG+PG+ VDGMDVL V KEA+ERARRGEGP+LVE YR+ HS A
Sbjct: 217 HSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVYRYGPHSSA 276
Query: 240 DPDELRDPAEK-ARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADES 298
D D P E+ A + +DPI +++L L +E + + ++I +E ++ A+E+
Sbjct: 277 DDDSRYRPKEEVAFWRKKDPIPRFRRFLEARGLWNEEWEEDVREEIRAELERGLKEAEEA 336
Query: 299 APPPRSQLLENVFAD 313
P P + E+VFA+
Sbjct: 337 GPVPPEWMFEDVFAE 351
>sp|Q72GU1|ODBA_THET2 2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus
thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
GN=TT_C1757 PE=3 SV=1
Length = 367
Score = 164 bits (414), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 157/315 (49%), Gaps = 10/315 (3%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKE-DSVVSTYRDHVHALS 59
M+ R ++ + GK F+ G EA ++ D V YRDH AL+
Sbjct: 45 MLAARMLDERYTILIRTGKT-SFIAPAAGHEAAQVAIAHAIRPGFDWVFPYYRDHGLALA 103
Query: 60 KGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYR 119
G+P + + ++ +G+ H SK N + I +P A GAA + K
Sbjct: 104 LGIPLKELFGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISMKLL 163
Query: 120 REVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRAT 179
R V + FGDG + G ++ +N AA+ P VFV ENN +AI + + T
Sbjct: 164 R-------TGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFVCENNFYAISVDYRHQT 216
Query: 180 SDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA 239
P I K AFG+PG+ VDGMDVL V KEA+ERARRGEGP+LVE YR+ HS A
Sbjct: 217 HSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVYRYGPHSSA 276
Query: 240 DPDELRDPAEK-ARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADES 298
D D P E+ A + +DPI +++L L +E + + ++I +E ++ A+E+
Sbjct: 277 DDDSRYRPKEEVAFWRKKDPIPRFRRFLEARGLWNEEWEEDVREEIRAELERGLKEAEEA 336
Query: 299 APPPRSQLLENVFAD 313
P P + +VFA+
Sbjct: 337 GPVPPEWMFADVFAE 351
>sp|P60090|ODPA_STAAW Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MW2) GN=pdhA PE=3 SV=1
Length = 370
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 157/315 (49%), Gaps = 19/315 (6%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
M+ R + + +G++ GF GQEA L+KED ++ YRD +
Sbjct: 55 MVWTRILDQRSISLNRQGRL-GFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWH 113
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
G+P ++E F + G +G + F + N L IG A G AF
Sbjct: 114 GLP----LTEAFLFSRGHFKG-----NQFPEGVNALSPQIIIGAQYIQAAGVAF------ 158
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
LK+ + V + + GDG + G F+E +N AA +K P +FV++NN +AI + T+
Sbjct: 159 -ALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTPRSKQTA 217
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA- 239
+ +K A G+PG VDGMD L V + KEA +RA GEGPTL+E TYR+ H++A
Sbjct: 218 AETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAG 277
Query: 240 -DPDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADES 298
DP R E A + +DP+ +K+L L +E + + ++ ++ A++ AD +
Sbjct: 278 DDPTRYRTSDEDAEWEKKDPLVRFRKFLENKGLWNEDKENEVIERAKADIKAAIKEADNT 337
Query: 299 APPPRSQLLENVFAD 313
+ L+E ++ D
Sbjct: 338 EKQTVTSLMEIMYED 352
>sp|Q6GAC1|ODPA_STAAS Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MSSA476) GN=pdhA PE=3 SV=1
Length = 370
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 157/315 (49%), Gaps = 19/315 (6%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
M+ R + + +G++ GF GQEA L+KED ++ YRD +
Sbjct: 55 MVWTRILDQRSISLNRQGRL-GFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWH 113
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
G+P ++E F + G +G + F + N L IG A G AF
Sbjct: 114 GLP----LTEAFLFSRGHFKG-----NQFPEGVNALSPQIIIGAQYIQAAGVAF------ 158
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
LK+ + V + + GDG + G F+E +N AA +K P +FV++NN +AI + T+
Sbjct: 159 -ALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTPRSKQTA 217
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA- 239
+ +K A G+PG VDGMD L V + KEA +RA GEGPTL+E TYR+ H++A
Sbjct: 218 AETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAG 277
Query: 240 -DPDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADES 298
DP R E A + +DP+ +K+L L +E + + ++ ++ A++ AD +
Sbjct: 278 DDPTRYRTSDEDAEWEKKDPLVRFRKFLENKGLWNEDKENEVIERAKADIKAAIKEADNT 337
Query: 299 APPPRSQLLENVFAD 313
+ L+E ++ D
Sbjct: 338 EKQTVTSLMEIMYED 352
>sp|Q820A6|ODPA_STAAN Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain N315) GN=pdhA PE=1 SV=1
Length = 370
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 157/315 (49%), Gaps = 19/315 (6%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
M+ R + + +G++ GF GQEA L+KED ++ YRD +
Sbjct: 55 MVWTRILDQRSISLNRQGRL-GFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWH 113
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
G+P ++E F + G +G + F + N L IG A G AF
Sbjct: 114 GLP----LTEAFLFSRGHFKG-----NQFPEGVNALSPQIIIGAQYIQAAGVAF------ 158
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
LK+ + V + + GDG + G F+E +N AA +K P +FV++NN +AI + T+
Sbjct: 159 -ALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTPRSKQTA 217
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA- 239
+ +K A G+PG VDGMD L V + KEA +RA GEGPTL+E TYR+ H++A
Sbjct: 218 AETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAG 277
Query: 240 -DPDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADES 298
DP R E A + +DP+ +K+L L +E + + ++ ++ A++ AD +
Sbjct: 278 DDPTRYRTSDEDAEWEKKDPLVRFRKFLENKGLWNEDKENEVIERAKADIKAAIKEADNT 337
Query: 299 APPPRSQLLENVFAD 313
+ L+E ++ D
Sbjct: 338 EKQTVTSLMEIMYED 352
>sp|P60089|ODPA_STAAM Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=pdhA PE=1 SV=1
Length = 370
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 157/315 (49%), Gaps = 19/315 (6%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
M+ R + + +G++ GF GQEA L+KED ++ YRD +
Sbjct: 55 MVWTRILDQRSISLNRQGRL-GFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWH 113
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
G+P ++E F + G +G + F + N L IG A G AF
Sbjct: 114 GLP----LTEAFLFSRGHFKG-----NQFPEGVNALSPQIIIGAQYIQAAGVAF------ 158
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
LK+ + V + + GDG + G F+E +N AA +K P +FV++NN +AI + T+
Sbjct: 159 -ALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTPRSKQTA 217
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA- 239
+ +K A G+PG VDGMD L V + KEA +RA GEGPTL+E TYR+ H++A
Sbjct: 218 AETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAG 277
Query: 240 -DPDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADES 298
DP R E A + +DP+ +K+L L +E + + ++ ++ A++ AD +
Sbjct: 278 DDPTRYRTSDEDAEWEKKDPLVRFRKFLENKGLWNEDKENEVIERAKADIKAAIKEADNT 337
Query: 299 APPPRSQLLENVFAD 313
+ L+E ++ D
Sbjct: 338 EKQTVTSLMEIMYED 352
>sp|Q5HGZ1|ODPA_STAAC Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain COL) GN=pdhA PE=3 SV=1
Length = 370
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 157/315 (49%), Gaps = 19/315 (6%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
M+ R + + +G++ GF GQEA L+KED ++ YRD +
Sbjct: 55 MVWTRILDQRSISLNRQGRL-GFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWH 113
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
G+P ++E F + G +G + F + N L IG A G AF
Sbjct: 114 GLP----LTEAFLFSRGHFKG-----NQFPEGVNALSPQIIIGAQYIQAAGVAF------ 158
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
LK+ + V + + GDG + G F+E +N AA +K P +FV++NN +AI + T+
Sbjct: 159 -ALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTPRSKQTA 217
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA- 239
+ +K A G+PG VDGMD L V + KEA +RA GEGPTL+E TYR+ H++A
Sbjct: 218 AETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAG 277
Query: 240 -DPDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADES 298
DP R E A + +DP+ +K+L L +E + + ++ ++ A++ AD +
Sbjct: 278 DDPTRYRTSDEDAEWEKKDPLVRFRKFLENKGLWNEDKENEVIERAKADIKAAIKEADNT 337
Query: 299 APPPRSQLLENVFAD 313
+ L+E ++ D
Sbjct: 338 EKQTVTSLMEIMYED 352
>sp|Q6GHZ2|ODPA_STAAR Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MRSA252) GN=pdhA PE=3 SV=1
Length = 370
Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 156/315 (49%), Gaps = 19/315 (6%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
M+ R + + +G++ GF GQEA L+KED ++ YRD +
Sbjct: 55 MVWTRILDQRSISLNRQGRL-GFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWH 113
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
G+P ++E F + G +G + F + N L IG G AF
Sbjct: 114 GLP----LTEAFLFSRGHFKG-----NQFPEGVNALSPQIIIGAQYIQTAGVAF------ 158
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
LK+ + V + + GDG + G F+E +N AA +K P +FV++NN +AI + T+
Sbjct: 159 -ALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTPRSKQTA 217
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA- 239
+ +K A G+PG VDGMD L V + KEA +RA GEGPTL+E TYR+ H++A
Sbjct: 218 AETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAG 277
Query: 240 -DPDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADES 298
DP R E A + +DP+ +K+L L +E + + ++ ++ A++ AD +
Sbjct: 278 DDPTRYRTSDEDAEWEKKDPLVRFRKFLENKGLWNEDKENEVIERAKADIKAAIKEADNT 337
Query: 299 APPPRSQLLENVFAD 313
+ L+E ++ D
Sbjct: 338 EKQTVTSLMEIMYED 352
>sp|P37940|ODBA_BACSU 2-oxoisovalerate dehydrogenase subunit alpha OS=Bacillus subtilis
(strain 168) GN=bfmBAA PE=1 SV=1
Length = 330
Score = 139 bits (349), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 161/318 (50%), Gaps = 17/318 (5%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKE-DSVVSTYRDHVHALS 59
M+L R ++ + GK+ FV GQEA G L +E D V+ YRD L+
Sbjct: 23 MLLARKIDERMWLLNRSGKI-PFVISCQGQEAAQVGAAFALDREMDYVLPYYRDMGVVLA 81
Query: 60 KGVPARAVMSELFGKATGCCRGQGGSM--HMFSKEHNLLGGFAFIGEGIPVATGAAFTSK 117
G+ A+ +M F KA G G M H K++ ++ G + + +P A G A +
Sbjct: 82 FGMTAKDLMMSGFAKAADPNSG-GRQMPGHFGQKKNRIVTGSSPVTTQVPHAVGIALAGR 140
Query: 118 YRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLR 177
++ D FG+G+ N G F E N AA+ KLP++F+ ENN +AI + + +
Sbjct: 141 MEKK-------DIAAFVTFGEGSSNQGDFHEGANFAAVHKLPVIFMCENNKYAISVPYDK 193
Query: 178 ATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHS 237
+ I + +GMPG V+G D L+V + KEA ERARRGEGPTL+E +YR HS
Sbjct: 194 QVACENISDRAIGYGMPGVTVNGNDPLEVYQAVKEARERARRGEGPTLIETISYRLTPHS 253
Query: 238 LADPDEL---RDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEF 294
D D R+ E+A+ + DP+ + YL E+ L S+ + + +I +V +A +
Sbjct: 254 SDDDDSSYRGREEVEEAKKS--DPLLTYQAYLKETGLLSDEIEQTMLDEIMAIVNEATDE 311
Query: 295 ADESAPPPRSQLLENVFA 312
A+ + L+ V+A
Sbjct: 312 AENAPYAAPESALDYVYA 329
>sp|Q8CPN3|ODPA_STAES Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=pdhA PE=3 SV=1
Length = 370
Score = 138 bits (348), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 153/313 (48%), Gaps = 19/313 (6%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
M+ R + + +G++ GF GQEA L+ ED ++ YRD +
Sbjct: 55 MVWTRILDQRSISLNRQGRL-GFYAPTAGQEASQLASQYALESEDFILPGYRDVPQIIWH 113
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
G+P +++ F + G +G + F + N L IG G AF
Sbjct: 114 GLP----LTDAFLFSRGHFKG-----NQFPEGVNALSPQIIIGAQYIQTAGVAFG----- 159
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
LK+ + V + + GDG + G F+E +N A+ +K P +FV++NN +AI + T+
Sbjct: 160 --LKKRGKNAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAISTPRSKQTA 217
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA- 239
+ +K + G+PG VDGMD L V + EA ERA GEGPT++E TYR+ H++A
Sbjct: 218 AETLAQKAISVGIPGIQVDGMDALAVYQATLEARERAVAGEGPTVIETLTYRYGPHTMAG 277
Query: 240 -DPDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADES 298
DP R E A + +DP+ +KYL L +E + + ++ ++ A++ AD +
Sbjct: 278 DDPTRYRTSDEDAEWEKKDPLVRFRKYLEAKGLWNEDKENEVVERAKSEIKAAIKEADNT 337
Query: 299 APPPRSQLLENVF 311
+ L++ ++
Sbjct: 338 EKQTVTSLMDIMY 350
>sp|Q5HQ76|ODPA_STAEQ Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=pdhA PE=3
SV=1
Length = 370
Score = 138 bits (348), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 153/313 (48%), Gaps = 19/313 (6%)
Query: 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSK 60
M+ R + + +G++ GF GQEA L+ ED ++ YRD +
Sbjct: 55 MVWTRILDQRSISLNRQGRL-GFYAPTAGQEASQLASQYALESEDFILPGYRDVPQIIWH 113
Query: 61 GVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRR 120
G+P +++ F + G +G + F + N L IG G AF
Sbjct: 114 GLP----LTDAFLFSRGHFKG-----NQFPEGVNALSPQIIIGAQYIQTAGVAFG----- 159
Query: 121 EVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS 180
LK+ + V + + GDG + G F+E +N A+ +K P +FV++NN +AI + T+
Sbjct: 160 --LKKRGKNAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAISTPRSKQTA 217
Query: 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA- 239
+ +K + G+PG VDGMD L V + EA ERA GEGPT++E TYR+ H++A
Sbjct: 218 AETLAQKAISVGIPGIQVDGMDALAVYQATLEARERAVAGEGPTVIETLTYRYGPHTMAG 277
Query: 240 -DPDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADES 298
DP R E A + +DP+ +KYL L +E + + ++ ++ A++ AD +
Sbjct: 278 DDPTRYRTSDEDAEWEKKDPLVRFRKYLEAKGLWNEDKENEVVERAKSEIKAAIKEADNT 337
Query: 299 APPPRSQLLENVF 311
+ L++ ++
Sbjct: 338 EKQTVTSLMDIMY 350
>sp|P35485|ODPA_ACHLA Pyruvate dehydrogenase E1 component subunit alpha (Fragment)
OS=Acholeplasma laidlawii GN=pdhA PE=4 SV=1
Length = 345
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 135/274 (49%), Gaps = 19/274 (6%)
Query: 2 ILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKG 61
+LGR+ + Q +G+M + GQEA G ++ +D YR+ L +G
Sbjct: 28 VLGRNADIKALQYQRQGRMLTYAPNM-GQEAAQIGMAAAMEPQDWNSPMYRELNTLLYRG 86
Query: 62 VPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRRE 121
V +G G + +G +L IG +A G A SK R+
Sbjct: 87 DKLENVFLYWYGNERGSIKPEGVK---------ILPTNIIIGSQSNIAAGLAMASKIRK- 136
Query: 122 VLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSD 181
+ VT GDG +G+F+E LN AA +K P+V V++NN WAI +A++
Sbjct: 137 ------TNEVTAFTIGDGGTAHGEFYEGLNFAASFKAPVVAVIQNNQWAISTPVRKASNS 190
Query: 182 PQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA-D 240
+ +KG AFG+P VDG D+L + +KEA++RAR+G+GPTL+E TYR H+ + D
Sbjct: 191 ETLAQKGVAFGIPYIQVDGNDMLAMYVASKEAMDRARKGDGPTLIEAFTYRMGPHTTSDD 250
Query: 241 PDEL-RDPAEKARYAARDPITALKKYLIESSLAS 273
P + R E+ +A +D I K YLI S
Sbjct: 251 PCSIYRTKEEENEWAKKDQIARFKTYLINKGYWS 284
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 135,144,351
Number of Sequences: 539616
Number of extensions: 5811356
Number of successful extensions: 16295
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 203
Number of HSP's that attempted gapping in prelim test: 15957
Number of HSP's gapped (non-prelim): 361
length of query: 339
length of database: 191,569,459
effective HSP length: 118
effective length of query: 221
effective length of database: 127,894,771
effective search space: 28264744391
effective search space used: 28264744391
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)